Query 022184
Match_columns 301
No_of_seqs 636 out of 1698
Neff 11.7
Searched_HMMs 29240
Date Mon Mar 25 15:18:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022184.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022184hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.8E-47 6.3E-52 307.1 32.7 272 3-301 31-303 (321)
2 1vyh_C Platelet-activating fac 100.0 2.4E-46 8.1E-51 310.6 34.0 272 3-301 107-393 (410)
3 2ynn_A Coatomer subunit beta'; 100.0 1.8E-46 6.1E-51 299.4 32.0 267 4-301 13-283 (304)
4 4gqb_B Methylosome protein 50; 100.0 6.9E-45 2.4E-49 294.3 32.8 275 4-301 30-312 (344)
5 1got_B GT-beta; complex (GTP-b 100.0 2.7E-44 9.1E-49 291.3 35.1 270 3-301 54-325 (340)
6 4g56_B MGC81050 protein; prote 100.0 1.8E-44 6.1E-49 293.9 29.8 280 4-301 42-325 (357)
7 2pbi_B Guanine nucleotide-bind 100.0 1.3E-43 4.4E-48 288.6 34.3 273 3-301 63-339 (354)
8 4ery_A WD repeat-containing pr 100.0 4E-43 1.4E-47 281.2 33.3 268 3-301 22-292 (312)
9 3iz6_a 40S ribosomal protein R 100.0 1.8E-43 6.3E-48 290.5 27.8 275 3-301 65-357 (380)
10 4h5i_A Guanine nucleotide-exch 100.0 9.9E-44 3.4E-48 290.3 25.8 286 3-301 13-325 (365)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-42 8.8E-47 280.1 32.6 270 5-300 17-315 (345)
12 2hes_X YDR267CP; beta-propelle 100.0 3.3E-42 1.1E-46 277.8 31.8 271 3-298 13-305 (330)
13 1nr0_A Actin interacting prote 100.0 5.2E-42 1.8E-46 298.3 35.1 269 3-301 58-380 (611)
14 3frx_A Guanine nucleotide-bind 100.0 7.1E-42 2.4E-46 274.6 33.1 271 3-301 16-299 (319)
15 4gqb_B Methylosome protein 50; 100.0 2.2E-42 7.6E-47 279.7 29.9 249 4-279 82-335 (344)
16 1nr0_A Actin interacting prote 100.0 6E-42 2E-46 297.9 34.8 276 3-301 146-549 (611)
17 3ow8_A WD repeat-containing pr 100.0 3.8E-42 1.3E-46 276.2 29.2 242 3-274 79-320 (321)
18 2ynn_A Coatomer subunit beta'; 100.0 8.6E-42 2.9E-46 272.3 30.5 232 56-301 6-241 (304)
19 1vyh_C Platelet-activating fac 100.0 2E-41 6.9E-46 281.0 29.8 231 56-301 101-351 (410)
20 1erj_A Transcriptional repress 100.0 4.7E-41 1.6E-45 277.4 31.5 272 3-299 63-363 (393)
21 1got_B GT-beta; complex (GTP-b 100.0 2.7E-41 9.2E-46 273.6 29.4 243 4-272 97-340 (340)
22 2xzm_R RACK1; ribosome, transl 100.0 1.4E-40 4.9E-45 269.7 33.2 274 3-301 20-322 (343)
23 2pbi_B Guanine nucleotide-bind 100.0 2.3E-40 7.8E-45 269.5 31.0 246 4-272 106-354 (354)
24 2ymu_A WD-40 repeat protein; u 100.0 2.2E-40 7.4E-45 286.6 32.4 261 3-301 302-562 (577)
25 1gxr_A ESG1, transducin-like e 100.0 1.7E-39 5.7E-44 262.5 35.3 270 3-301 50-319 (337)
26 2j04_B YDR362CP, TAU91; beta p 100.0 8.8E-42 3E-46 289.3 22.8 287 3-300 132-455 (524)
27 3frx_A Guanine nucleotide-bind 100.0 3.6E-40 1.2E-44 264.7 30.7 239 56-301 10-250 (319)
28 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.7E-40 1.3E-44 267.4 30.9 256 3-282 60-342 (345)
29 4g56_B MGC81050 protein; prote 100.0 1.3E-40 4.5E-45 271.1 27.5 247 4-277 94-345 (357)
30 2xzm_R RACK1; ribosome, transl 100.0 1.5E-39 5E-44 263.8 31.3 242 55-301 13-268 (343)
31 2pm7_B Protein transport prote 100.0 1.6E-39 5.4E-44 258.4 30.6 246 3-274 8-284 (297)
32 1sq9_A Antiviral protein SKI8; 100.0 1.6E-39 5.4E-44 268.6 31.6 276 3-300 15-366 (397)
33 2hes_X YDR267CP; beta-propelle 100.0 1.2E-39 4.2E-44 262.8 29.3 254 3-275 57-328 (330)
34 3dw8_B Serine/threonine-protei 100.0 9.3E-40 3.2E-44 274.1 28.3 262 3-280 27-378 (447)
35 1k8k_C P40, ARP2/3 complex 41 100.0 3.6E-39 1.2E-43 264.1 31.1 246 3-275 7-274 (372)
36 3iz6_a 40S ribosomal protein R 100.0 8.2E-40 2.8E-44 268.8 27.3 257 4-277 108-377 (380)
37 4aow_A Guanine nucleotide-bind 100.0 8.5E-39 2.9E-43 258.8 32.7 256 3-277 37-339 (340)
38 3ei3_B DNA damage-binding prot 100.0 2.3E-39 7.8E-44 266.6 29.3 269 3-301 72-365 (383)
39 4e54_B DNA damage-binding prot 100.0 3E-40 1E-44 276.2 24.3 272 4-301 119-413 (435)
40 2pm9_A Protein WEB1, protein t 100.0 6.1E-40 2.1E-44 272.7 25.9 259 3-279 66-341 (416)
41 1erj_A Transcriptional repress 100.0 2.4E-39 8.2E-44 267.2 29.1 240 6-276 125-390 (393)
42 3zwl_B Eukaryotic translation 100.0 1E-38 3.5E-43 260.9 32.4 265 3-301 31-328 (369)
43 2ymu_A WD-40 repeat protein; u 100.0 7.9E-39 2.7E-43 276.8 33.4 261 3-301 261-521 (577)
44 2pm9_A Protein WEB1, protein t 100.0 5.7E-40 2E-44 272.8 25.2 279 5-300 13-317 (416)
45 2pm7_B Protein transport prote 100.0 6.6E-39 2.3E-43 254.8 29.7 232 58-301 4-267 (297)
46 3mkq_A Coatomer beta'-subunit; 100.0 4E-39 1.4E-43 289.2 31.8 268 3-301 12-283 (814)
47 2aq5_A Coronin-1A; WD40 repeat 100.0 7.3E-39 2.5E-43 265.2 29.7 259 33-301 55-326 (402)
48 3dwl_C Actin-related protein 2 100.0 5.5E-40 1.9E-44 269.7 22.7 244 4-274 11-280 (377)
49 3dm0_A Maltose-binding peripla 100.0 1.3E-38 4.4E-43 281.0 32.8 273 3-301 381-675 (694)
50 1gxr_A ESG1, transducin-like e 100.0 2.9E-38 9.9E-43 255.2 32.0 268 4-301 9-278 (337)
51 3i2n_A WD repeat-containing pr 100.0 2.2E-38 7.4E-43 258.0 30.2 272 3-301 17-334 (357)
52 1yfq_A Cell cycle arrest prote 100.0 1.6E-38 5.3E-43 257.5 28.7 265 3-301 10-305 (342)
53 3bg1_A Protein SEC13 homolog; 100.0 4.3E-39 1.5E-43 258.1 24.1 246 3-274 12-292 (316)
54 1r5m_A SIR4-interacting protei 100.0 1.6E-38 5.5E-43 264.5 28.4 270 4-301 108-407 (425)
55 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-37 7.3E-42 247.6 33.6 262 3-301 17-279 (313)
56 3vl1_A 26S proteasome regulato 100.0 1.1E-38 3.7E-43 265.6 26.6 264 7-301 100-398 (420)
57 3bg1_A Protein SEC13 homolog; 100.0 4.6E-39 1.6E-43 257.9 22.7 234 57-301 7-275 (316)
58 3gre_A Serine/threonine-protei 100.0 9.3E-39 3.2E-43 267.4 24.5 277 4-299 63-418 (437)
59 3k26_A Polycomb protein EED; W 100.0 6.2E-39 2.1E-43 262.0 22.6 275 3-301 17-348 (366)
60 1r5m_A SIR4-interacting protei 100.0 3.3E-38 1.1E-42 262.6 26.8 271 4-301 45-343 (425)
61 3dwl_C Actin-related protein 2 100.0 2.4E-39 8.2E-44 265.8 19.3 230 59-301 7-264 (377)
62 4ery_A WD repeat-containing pr 100.0 2.7E-37 9.2E-42 247.3 29.3 215 55-282 15-230 (312)
63 3vl1_A 26S proteasome regulato 100.0 2.3E-38 7.8E-43 263.6 23.9 262 7-300 59-346 (420)
64 3f3f_A Nucleoporin SEH1; struc 100.0 2.9E-37 9.9E-42 250.1 29.7 261 3-282 10-344 (351)
65 4h5i_A Guanine nucleotide-exch 100.0 3.5E-37 1.2E-41 251.6 28.3 251 6-276 75-344 (365)
66 4aow_A Guanine nucleotide-bind 100.0 2.2E-36 7.6E-41 244.6 32.3 238 56-301 31-269 (340)
67 3jrp_A Fusion protein of prote 100.0 9.4E-37 3.2E-41 250.2 29.8 248 3-276 10-288 (379)
68 4aez_A CDC20, WD repeat-contai 100.0 1.1E-36 3.8E-41 252.1 30.3 261 3-296 133-400 (401)
69 3mmy_A MRNA export factor; mRN 100.0 2.4E-36 8.3E-41 246.7 31.5 273 3-301 38-328 (368)
70 1sq9_A Antiviral protein SKI8; 100.0 1.2E-36 4E-41 251.4 29.8 260 3-277 61-397 (397)
71 3dm0_A Maltose-binding peripla 100.0 5.3E-37 1.8E-41 270.7 29.2 237 57-301 376-615 (694)
72 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.5E-36 8.5E-41 253.6 31.5 227 60-300 99-366 (450)
73 4aez_A CDC20, WD repeat-contai 100.0 2.4E-36 8E-41 250.1 30.0 246 33-301 111-362 (401)
74 3jrp_A Fusion protein of prote 100.0 2.5E-36 8.5E-41 247.7 29.4 233 57-301 5-269 (379)
75 3k26_A Polycomb protein EED; W 100.0 3.3E-37 1.1E-41 251.8 23.8 247 3-275 68-366 (366)
76 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-36 5.2E-41 245.9 27.2 236 56-301 4-319 (351)
77 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-36 4.9E-41 248.7 26.9 229 59-301 4-257 (372)
78 4gga_A P55CDC, cell division c 100.0 1.1E-35 3.7E-40 247.6 32.4 263 7-301 108-377 (420)
79 2xyi_A Probable histone-bindin 100.0 2.6E-36 8.9E-41 251.9 26.2 289 4-301 45-391 (430)
80 3sfz_A APAF-1, apoptotic pepti 100.0 9.6E-36 3.3E-40 278.1 32.9 267 3-301 614-895 (1249)
81 4a11_B DNA excision repair pro 100.0 6.6E-36 2.2E-40 247.5 28.4 258 3-282 42-372 (408)
82 3zwl_B Eukaryotic translation 100.0 4.8E-36 1.6E-40 245.1 27.2 232 54-301 23-272 (369)
83 4ggc_A P55CDC, cell division c 100.0 8.8E-36 3E-40 238.9 27.5 249 7-277 28-317 (318)
84 2xyi_A Probable histone-bindin 100.0 7.7E-36 2.6E-40 249.1 27.3 260 4-276 128-411 (430)
85 3v7d_B Cell division control p 100.0 5.8E-35 2E-39 246.2 32.8 265 3-298 161-443 (464)
86 4gga_A P55CDC, cell division c 100.0 2.5E-35 8.7E-40 245.3 29.7 250 3-282 146-402 (420)
87 3i2n_A WD repeat-containing pr 100.0 6.1E-36 2.1E-40 243.5 24.9 256 3-278 64-356 (357)
88 2j04_B YDR362CP, TAU91; beta p 100.0 5.5E-36 1.9E-40 253.9 24.5 253 4-275 207-517 (524)
89 3ei3_B DNA damage-binding prot 100.0 7.2E-35 2.5E-39 239.7 29.6 232 56-301 66-323 (383)
90 4gq1_A NUP37; propeller, trans 100.0 1.1E-35 3.9E-40 245.2 23.9 231 62-301 88-372 (393)
91 3jro_A Fusion protein of prote 100.0 2E-35 7E-40 262.3 26.3 249 3-277 8-287 (753)
92 3mkq_A Coatomer beta'-subunit; 100.0 3.9E-35 1.3E-39 263.3 28.4 231 56-301 6-241 (814)
93 3v7d_B Cell division control p 100.0 2E-34 6.8E-39 243.0 31.0 255 7-301 125-404 (464)
94 1pgu_A Actin interacting prote 100.0 1.1E-34 3.7E-39 252.6 29.2 269 3-299 62-349 (615)
95 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-35 4E-40 247.2 21.9 246 3-301 14-280 (588)
96 4e54_B DNA damage-binding prot 100.0 5.5E-35 1.9E-39 244.3 26.1 254 3-279 163-434 (435)
97 1pgu_A Actin interacting prote 100.0 2.3E-34 7.7E-39 250.5 31.0 272 3-297 17-307 (615)
98 3sfz_A APAF-1, apoptotic pepti 100.0 4E-36 1.4E-40 280.7 20.7 262 4-301 961-1231(1249)
99 3odt_A Protein DOA1; ubiquitin 100.0 5.5E-34 1.9E-38 227.8 30.2 243 4-282 59-303 (313)
100 3jro_A Fusion protein of prote 100.0 1.3E-34 4.6E-39 257.0 25.5 233 57-301 3-267 (753)
101 3gre_A Serine/threonine-protei 100.0 2.1E-35 7.2E-40 247.1 19.1 219 57-282 56-299 (437)
102 2aq5_A Coronin-1A; WD40 repeat 100.0 5.3E-35 1.8E-39 242.1 21.2 255 3-278 80-345 (402)
103 4a11_B DNA excision repair pro 100.0 1.3E-33 4.4E-38 233.8 29.5 231 34-278 22-279 (408)
104 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-34 8.7E-39 239.2 24.9 198 61-274 83-296 (588)
105 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.4E-33 8.1E-38 235.2 30.9 256 3-301 158-420 (445)
106 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-33 4.4E-38 236.1 27.9 250 4-297 133-394 (435)
107 2oaj_A Protein SNI1; WD40 repe 100.0 9E-34 3.1E-38 255.3 27.9 224 59-298 13-281 (902)
108 3dw8_B Serine/threonine-protei 100.0 2.9E-34 9.8E-39 240.7 22.2 232 61-301 26-355 (447)
109 3lrv_A PRE-mRNA-splicing facto 100.0 2.6E-34 8.8E-39 233.0 18.5 233 19-276 48-293 (343)
110 2oaj_A Protein SNI1; WD40 repe 100.0 6.6E-33 2.2E-37 249.7 28.0 238 3-273 16-310 (902)
111 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.3E-32 3.2E-36 225.5 31.9 249 7-298 122-372 (445)
112 4gq1_A NUP37; propeller, trans 100.0 1.4E-33 4.9E-38 232.6 20.1 228 33-274 109-388 (393)
113 1yfq_A Cell cycle arrest prote 100.0 3.2E-32 1.1E-36 220.4 27.7 234 3-272 55-321 (342)
114 1p22_A F-BOX/WD-repeat protein 100.0 2.6E-32 9E-37 228.2 26.0 254 3-298 172-434 (435)
115 3bws_A Protein LP49; two-domai 100.0 2.1E-31 7.2E-36 222.5 31.3 267 5-301 123-413 (433)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.3E-31 7.8E-36 223.4 31.0 247 5-274 103-390 (450)
117 3vu4_A KMHSV2; beta-propeller 100.0 4E-32 1.4E-36 221.0 25.0 232 3-276 18-272 (355)
118 4ggc_A P55CDC, cell division c 100.0 3.5E-31 1.2E-35 212.1 30.2 224 66-301 28-297 (318)
119 3lrv_A PRE-mRNA-splicing facto 100.0 9.6E-33 3.3E-37 223.8 20.6 213 70-301 43-273 (343)
120 2w18_A PALB2, fancn, partner a 100.0 2.5E-31 8.4E-36 208.6 25.4 244 4-273 86-355 (356)
121 1l0q_A Surface layer protein; 100.0 2.9E-30 9.9E-35 212.8 30.8 241 33-301 10-256 (391)
122 1l0q_A Surface layer protein; 100.0 5.2E-30 1.8E-34 211.3 29.1 244 4-282 31-282 (391)
123 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-30 3.6E-35 212.6 22.1 220 58-301 14-253 (355)
124 3bws_A Protein LP49; two-domai 100.0 1.7E-29 5.8E-34 211.0 27.2 251 33-301 97-357 (433)
125 3mmy_A MRNA export factor; mRN 100.0 3E-30 1E-34 210.6 22.1 238 3-273 85-344 (368)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 5E-29 1.7E-33 206.7 27.3 238 35-299 159-408 (415)
127 2w18_A PALB2, fancn, partner a 100.0 8.8E-29 3E-33 194.2 24.8 252 33-301 61-339 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 7E-29 2.4E-33 205.8 19.2 268 6-301 64-366 (415)
129 2ojh_A Uncharacterized protein 100.0 4.4E-28 1.5E-32 191.8 20.5 245 32-301 19-284 (297)
130 2ecf_A Dipeptidyl peptidase IV 100.0 1.9E-27 6.4E-32 211.5 26.2 223 65-301 110-392 (741)
131 1ri6_A Putative isomerase YBHE 100.0 4.5E-26 1.5E-30 184.2 28.1 273 4-300 37-334 (343)
132 3vgz_A Uncharacterized protein 100.0 1.7E-25 5.9E-30 181.6 31.2 276 5-301 41-326 (353)
133 2z3z_A Dipeptidyl aminopeptida 100.0 4E-26 1.4E-30 201.9 26.1 267 5-301 82-413 (706)
134 1nir_A Nitrite reductase; hemo 100.0 7.2E-26 2.4E-30 193.3 26.2 257 11-301 144-433 (543)
135 1ri6_A Putative isomerase YBHE 100.0 1.5E-25 5.2E-30 181.1 26.7 249 33-301 13-289 (343)
136 1nir_A Nitrite reductase; hemo 99.9 2.2E-25 7.4E-30 190.4 27.1 274 5-301 179-491 (543)
137 1xfd_A DIP, dipeptidyl aminope 99.9 3E-26 1E-30 203.2 22.7 270 5-301 17-372 (723)
138 2ecf_A Dipeptidyl peptidase IV 99.9 1E-25 3.5E-30 200.3 23.8 268 5-301 109-437 (741)
139 1xfd_A DIP, dipeptidyl aminope 99.9 1.5E-25 5E-30 198.8 24.0 282 6-301 62-422 (723)
140 1k32_A Tricorn protease; prote 99.9 3.7E-25 1.3E-29 203.2 25.9 265 4-301 203-484 (1045)
141 3hfq_A Uncharacterized protein 99.9 3.7E-24 1.3E-28 173.6 28.4 252 33-301 14-298 (347)
142 3scy_A Hypothetical bacterial 99.9 7.6E-23 2.6E-27 166.7 33.4 275 6-297 51-360 (361)
143 3u4y_A Uncharacterized protein 99.9 9.1E-24 3.1E-28 170.0 27.6 248 33-301 18-285 (331)
144 3o4h_A Acylamino-acid-releasin 99.9 1.2E-24 4.1E-29 188.4 23.1 252 5-301 22-294 (582)
145 3hfq_A Uncharacterized protein 99.9 4.1E-23 1.4E-27 167.4 30.6 258 6-280 41-324 (347)
146 3u4y_A Uncharacterized protein 99.9 6.3E-24 2.2E-28 171.0 25.2 246 5-280 41-309 (331)
147 2oit_A Nucleoporin 214KDA; NH2 99.9 5.7E-25 1.9E-29 183.0 19.4 206 63-276 36-279 (434)
148 2ojh_A Uncharacterized protein 99.9 8.6E-24 3E-28 167.0 22.4 232 4-266 41-293 (297)
149 3vgz_A Uncharacterized protein 99.9 1.5E-23 5.1E-28 170.2 23.6 221 63-301 40-284 (353)
150 3scy_A Hypothetical bacterial 99.9 3.1E-22 1.1E-26 163.1 31.3 262 20-301 14-318 (361)
151 1k32_A Tricorn protease; prote 99.9 1.3E-23 4.3E-28 193.2 25.3 222 59-301 199-433 (1045)
152 2z3z_A Dipeptidyl aminopeptida 99.9 3.3E-24 1.1E-28 189.7 20.0 220 64-301 82-368 (706)
153 1pby_B Quinohemoprotein amine 99.9 1.8E-23 6E-28 168.5 21.7 221 65-301 35-292 (337)
154 1pby_B Quinohemoprotein amine 99.9 2.1E-23 7E-28 168.1 21.1 244 6-283 35-318 (337)
155 2oit_A Nucleoporin 214KDA; NH2 99.9 6.5E-24 2.2E-28 176.7 18.3 208 61-273 90-331 (434)
156 3pe7_A Oligogalacturonate lyas 99.9 3.1E-23 1E-27 170.6 18.0 266 10-301 41-363 (388)
157 1jmx_B Amine dehydrogenase; ox 99.9 2E-22 6.8E-27 163.2 22.5 245 10-283 5-333 (349)
158 1z68_A Fibroblast activation p 99.9 3.2E-24 1.1E-28 190.1 11.4 220 67-301 19-324 (719)
159 3o4h_A Acylamino-acid-releasin 99.9 5.6E-23 1.9E-27 177.9 17.8 215 63-301 21-258 (582)
160 1z68_A Fibroblast activation p 99.9 1E-22 3.5E-27 180.5 19.5 259 8-300 19-367 (719)
161 4a5s_A Dipeptidyl peptidase 4 99.9 2.3E-21 7.8E-26 172.2 26.2 249 5-282 17-360 (740)
162 1jmx_B Amine dehydrogenase; ox 99.9 3E-22 1E-26 162.2 18.6 213 68-301 4-307 (349)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 2E-21 7E-26 158.5 21.9 252 35-301 14-322 (365)
164 4a5s_A Dipeptidyl peptidase 4 99.9 5.7E-22 2E-26 176.0 18.3 231 63-301 16-331 (740)
165 1jof_A Carboxy-CIS,CIS-muconat 99.9 1E-20 3.6E-25 154.3 22.2 250 6-277 41-343 (365)
166 2oiz_A Aromatic amine dehydrog 99.9 2.4E-19 8.4E-24 145.7 26.8 249 33-301 29-360 (361)
167 3azo_A Aminopeptidase; POP fam 99.9 1.9E-19 6.4E-24 158.2 26.9 263 4-294 23-341 (662)
168 3c5m_A Oligogalacturonate lyas 99.9 6.9E-21 2.3E-25 156.9 13.5 266 7-301 38-363 (396)
169 3pe7_A Oligogalacturonate lyas 99.8 1.9E-19 6.6E-24 147.9 19.8 200 69-280 41-278 (388)
170 3fvz_A Peptidyl-glycine alpha- 99.8 4.4E-18 1.5E-22 136.7 26.5 255 5-275 24-322 (329)
171 3fvz_A Peptidyl-glycine alpha- 99.8 4.4E-18 1.5E-22 136.7 25.2 227 63-301 23-304 (329)
172 1q7f_A NHL, brain tumor CG1071 99.8 2.5E-17 8.5E-22 129.7 28.0 243 6-276 31-281 (286)
173 1q7f_A NHL, brain tumor CG1071 99.8 1.5E-17 5.3E-22 130.9 26.7 231 60-301 26-263 (286)
174 2dg1_A DRP35, lactonase; beta 99.8 7.1E-18 2.4E-22 135.8 24.0 262 4-301 5-292 (333)
175 2xdw_A Prolyl endopeptidase; a 99.8 2.1E-18 7.3E-23 152.5 22.4 226 61-301 122-392 (710)
176 3azo_A Aminopeptidase; POP fam 99.8 8.6E-19 2.9E-23 154.0 17.8 229 56-301 16-306 (662)
177 2gop_A Trilobed protease; beta 99.8 7.3E-18 2.5E-22 136.4 19.6 208 64-298 59-311 (347)
178 3e5z_A Putative gluconolactona 99.8 1.5E-16 5.1E-21 125.9 26.6 239 7-280 30-291 (296)
179 3e5z_A Putative gluconolactona 99.8 3E-17 1E-21 129.9 21.9 220 59-301 23-269 (296)
180 3c5m_A Oligogalacturonate lyas 99.8 5.6E-19 1.9E-23 145.4 12.4 221 63-301 35-295 (396)
181 1rwi_B Serine/threonine-protei 99.8 2.2E-16 7.4E-21 123.2 25.1 202 63-278 66-267 (270)
182 2bkl_A Prolyl endopeptidase; m 99.8 1.6E-17 5.6E-22 146.5 20.3 226 60-301 117-375 (695)
183 2xdw_A Prolyl endopeptidase; a 99.8 1.1E-16 3.6E-21 141.7 24.5 250 6-277 126-416 (710)
184 2z2n_A Virginiamycin B lyase; 99.8 1.4E-14 4.9E-19 114.4 33.3 262 5-301 15-278 (299)
185 1rwi_B Serine/threonine-protei 99.8 4.6E-16 1.6E-20 121.3 23.6 221 65-301 25-246 (270)
186 3dsm_A Uncharacterized protein 99.7 1.9E-15 6.6E-20 121.2 24.7 217 64-300 44-278 (328)
187 2dg1_A DRP35, lactonase; beta 99.7 8.5E-15 2.9E-19 117.7 28.5 240 6-274 46-315 (333)
188 2bkl_A Prolyl endopeptidase; m 99.7 3.5E-16 1.2E-20 138.1 21.5 251 5-278 121-400 (695)
189 1qks_A Cytochrome CD1 nitrite 99.7 6.7E-15 2.3E-19 125.7 28.4 223 65-301 198-452 (567)
190 3dsm_A Uncharacterized protein 99.7 2.4E-15 8.1E-20 120.7 24.3 218 63-296 83-319 (328)
191 2z2n_A Virginiamycin B lyase; 99.7 1.4E-14 4.7E-19 114.5 28.2 226 59-301 10-237 (299)
192 3no2_A Uncharacterized protein 99.7 2.7E-15 9.1E-20 117.1 23.3 211 74-301 4-225 (276)
193 2qc5_A Streptogramin B lactona 99.7 1.1E-13 3.9E-18 109.2 31.6 263 5-301 20-284 (300)
194 1yr2_A Prolyl oligopeptidase; 99.7 7E-16 2.4E-20 137.1 20.5 226 61-301 160-419 (741)
195 2gop_A Trilobed protease; beta 99.7 5.6E-16 1.9E-20 125.3 18.3 229 6-277 60-332 (347)
196 3no2_A Uncharacterized protein 99.7 1.5E-14 5.2E-19 112.9 24.7 232 19-282 5-259 (276)
197 3g4e_A Regucalcin; six bladed 99.7 1.3E-14 4.4E-19 114.8 24.4 222 62-301 11-254 (297)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.4E-14 4.8E-19 115.4 23.7 225 63-301 17-280 (314)
199 2oiz_A Aromatic amine dehydrog 99.7 5.7E-15 2E-19 120.0 21.3 235 9-257 54-360 (361)
200 1qks_A Cytochrome CD1 nitrite 99.7 2.3E-14 8E-19 122.4 24.3 199 73-284 165-382 (567)
201 1yr2_A Prolyl oligopeptidase; 99.7 1.2E-14 4.1E-19 129.2 22.8 249 6-278 164-444 (741)
202 2mad_H Methylamine dehydrogena 99.7 3E-13 1E-17 110.0 28.8 220 68-301 70-330 (373)
203 1xip_A Nucleoporin NUP159; bet 99.7 5.7E-15 1.9E-19 119.4 17.2 177 65-262 39-231 (388)
204 2qc5_A Streptogramin B lactona 99.7 7.4E-13 2.5E-17 104.5 28.5 224 61-301 17-242 (300)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2E-13 6.7E-18 108.7 25.3 204 62-276 69-300 (314)
206 2ghs_A AGR_C_1268P; regucalcin 99.6 3.8E-13 1.3E-17 107.8 26.7 215 65-301 50-284 (326)
207 3hrp_A Uncharacterized protein 99.6 9.8E-14 3.3E-18 114.5 22.4 223 64-301 131-392 (409)
208 3sjl_D Methylamine dehydrogena 99.6 1.7E-13 5.7E-18 110.5 22.3 244 38-301 60-343 (386)
209 1xip_A Nucleoporin NUP159; bet 99.6 4.7E-14 1.6E-18 114.1 17.3 168 113-300 38-225 (388)
210 3g4e_A Regucalcin; six bladed 99.6 8.7E-13 3E-17 104.2 23.8 229 8-264 16-261 (297)
211 3hrp_A Uncharacterized protein 99.6 1.9E-12 6.7E-17 106.7 26.5 238 6-273 132-408 (409)
212 2ece_A 462AA long hypothetical 99.6 6.3E-13 2.2E-17 107.9 22.1 267 33-301 41-393 (462)
213 3iuj_A Prolyl endopeptidase; h 99.6 5.1E-14 1.7E-18 124.1 17.0 223 61-301 126-383 (693)
214 3dr2_A Exported gluconolactona 99.6 1.9E-12 6.6E-17 102.7 24.5 231 7-272 47-303 (305)
215 2qe8_A Uncharacterized protein 99.6 7.9E-13 2.7E-17 106.7 22.5 232 64-301 17-303 (343)
216 3c75_H MADH, methylamine dehyd 99.6 1.5E-12 5.2E-17 106.7 23.2 212 68-282 122-409 (426)
217 2mad_H Methylamine dehydrogena 99.5 2.8E-11 9.5E-16 98.5 28.4 202 65-281 126-356 (373)
218 3iuj_A Prolyl endopeptidase; h 99.5 1.2E-12 4.1E-17 115.4 21.8 250 5-278 129-408 (693)
219 3dr2_A Exported gluconolactona 99.5 8.5E-13 2.9E-17 104.7 18.8 217 61-301 42-289 (305)
220 3sjl_D Methylamine dehydrogena 99.5 1E-11 3.5E-16 100.1 23.1 220 65-299 138-384 (386)
221 2qe8_A Uncharacterized protein 99.5 9.4E-12 3.2E-16 100.4 21.9 250 6-272 18-318 (343)
222 2ghs_A AGR_C_1268P; regucalcin 99.5 4.1E-11 1.4E-15 95.9 25.1 226 8-265 52-292 (326)
223 3c75_H MADH, methylamine dehyd 99.5 1.2E-12 4.1E-17 107.3 15.8 217 73-301 82-382 (426)
224 1mda_H Methylamine dehydrogena 99.5 7.2E-12 2.5E-16 101.1 19.7 242 38-298 47-366 (368)
225 2hz6_A Endoplasmic reticulum t 99.5 1.3E-14 4.5E-19 118.1 2.0 202 74-300 8-215 (369)
226 2ece_A 462AA long hypothetical 99.4 5.6E-10 1.9E-14 90.9 24.5 190 65-263 139-399 (462)
227 1npe_A Nidogen, entactin; glyc 99.4 1E-09 3.5E-14 85.2 25.3 221 64-300 36-262 (267)
228 1yiq_A Quinohemoprotein alcoho 99.4 1.8E-10 6E-15 101.2 22.6 216 84-301 182-530 (689)
229 1fwx_A Nitrous oxide reductase 99.3 1.2E-11 4.2E-16 103.9 12.3 195 67-275 88-361 (595)
230 2iwa_A Glutamine cyclotransfer 99.3 5.5E-10 1.9E-14 85.4 20.0 196 65-276 22-238 (266)
231 2iwa_A Glutamine cyclotransfer 99.3 1.1E-09 3.8E-14 83.8 20.0 178 114-301 22-218 (266)
232 1kb0_A Quinohemoprotein alcoho 99.3 6.3E-10 2.2E-14 97.5 20.2 215 84-300 189-531 (677)
233 1mda_H Methylamine dehydrogena 99.2 5.5E-10 1.9E-14 90.1 16.0 200 86-301 47-326 (368)
234 3nol_A Glutamine cyclotransfer 99.2 2.6E-09 8.9E-14 80.8 18.6 181 66-264 45-244 (262)
235 3nol_A Glutamine cyclotransfer 99.2 4.5E-09 1.5E-13 79.5 19.4 175 115-301 45-237 (262)
236 3nok_A Glutaminyl cyclase; bet 99.2 1.2E-08 4.2E-13 77.2 20.3 174 114-301 56-247 (268)
237 1fwx_A Nitrous oxide reductase 99.2 4.2E-10 1.5E-14 94.7 12.6 198 64-277 134-433 (595)
238 3mbr_X Glutamine cyclotransfer 99.1 5.5E-08 1.9E-12 73.0 21.3 177 113-301 21-216 (243)
239 2p4o_A Hypothetical protein; p 99.1 1E-07 3.6E-12 75.4 23.1 219 64-301 32-270 (306)
240 1kb0_A Quinohemoprotein alcoho 99.1 8.7E-08 3E-12 84.1 24.0 203 66-275 245-567 (677)
241 2hz6_A Endoplasmic reticulum t 99.1 9.9E-12 3.4E-16 101.2 -0.8 147 123-281 8-155 (369)
242 2fp8_A Strictosidine synthase; 99.1 8.1E-08 2.8E-12 76.6 21.6 211 63-282 18-275 (322)
243 3mbr_X Glutamine cyclotransfer 99.1 8.4E-08 2.9E-12 72.0 19.9 183 64-264 21-223 (243)
244 1npe_A Nidogen, entactin; glyc 99.1 7.1E-07 2.4E-11 69.0 26.1 178 64-257 79-263 (267)
245 3hxj_A Pyrrolo-quinoline quino 99.0 9.4E-09 3.2E-13 82.1 15.8 200 75-300 107-306 (330)
246 3nok_A Glutaminyl cyclase; bet 99.0 4.7E-08 1.6E-12 74.0 17.8 180 66-264 57-254 (268)
247 3hxj_A Pyrrolo-quinoline quino 99.0 8.1E-08 2.8E-12 76.6 20.2 190 63-276 136-325 (330)
248 3v64_C Agrin; beta propeller, 99.0 1.4E-06 4.9E-11 70.1 27.0 206 64-282 73-282 (349)
249 1yiq_A Quinohemoprotein alcoho 99.0 2.1E-07 7.2E-12 81.8 23.5 189 67-262 238-536 (689)
250 3v65_B Low-density lipoprotein 99.0 1.3E-06 4.4E-11 71.4 26.2 207 63-282 115-325 (386)
251 2xe4_A Oligopeptidase B; hydro 99.0 1.2E-07 4.1E-12 84.3 21.3 199 61-273 170-398 (751)
252 2fp8_A Strictosidine synthase; 99.0 3.1E-07 1E-11 73.2 21.5 201 64-276 80-314 (322)
253 2p4o_A Hypothetical protein; p 98.9 1.5E-06 5.2E-11 68.6 24.4 226 6-266 33-279 (306)
254 1kv9_A Type II quinohemoprotei 98.9 1.3E-06 4.3E-11 76.7 25.6 199 84-283 177-496 (668)
255 3qqz_A Putative uncharacterize 98.9 1.5E-06 5E-11 66.2 22.3 203 59-274 22-252 (255)
256 4a2l_A BT_4663, two-component 98.9 2.4E-05 8.3E-10 70.2 33.9 227 63-301 262-510 (795)
257 4a2l_A BT_4663, two-component 98.9 2E-05 6.9E-10 70.7 32.4 225 63-301 356-598 (795)
258 1k3i_A Galactose oxidase precu 98.9 1E-06 3.4E-11 77.3 23.1 256 9-279 190-501 (656)
259 2xe4_A Oligopeptidase B; hydro 98.9 3.6E-07 1.2E-11 81.3 20.2 158 114-275 175-354 (751)
260 1ijq_A LDL receptor, low-densi 98.8 1.9E-05 6.5E-10 62.6 28.7 208 63-282 29-245 (316)
261 3tc9_A Hypothetical hydrolase; 98.8 1.6E-06 5.5E-11 71.8 21.8 154 65-232 138-300 (430)
262 3q7m_A Lipoprotein YFGL, BAMB; 98.8 5.6E-06 1.9E-10 67.4 24.8 189 74-282 102-303 (376)
263 3v64_C Agrin; beta propeller, 98.8 6.8E-06 2.3E-10 66.1 24.0 199 63-276 33-235 (349)
264 3p5b_L Low density lipoprotein 98.8 3.5E-05 1.2E-09 63.2 28.9 208 63-282 111-327 (400)
265 3q7m_A Lipoprotein YFGL, BAMB; 98.8 1.9E-06 6.5E-11 70.1 21.0 197 75-281 53-264 (376)
266 1ijq_A LDL receptor, low-densi 98.8 2.5E-05 8.5E-10 61.9 26.4 187 77-276 3-196 (316)
267 3qqz_A Putative uncharacterize 98.8 1.8E-05 6.3E-10 60.1 24.3 204 5-231 27-251 (255)
268 4hw6_A Hypothetical protein, I 98.8 4.7E-06 1.6E-10 69.1 22.6 202 64-279 139-377 (433)
269 2ad6_A Methanol dehydrogenase 98.8 1.2E-06 4.1E-11 75.3 19.4 165 117-283 239-502 (571)
270 3sov_A LRP-6, low-density lipo 98.8 1.4E-05 4.7E-10 63.4 24.0 206 65-282 36-245 (318)
271 3v65_B Low-density lipoprotein 98.8 6.8E-06 2.3E-10 67.1 22.9 196 66-276 79-278 (386)
272 1flg_A Protein (quinoprotein e 98.7 1.4E-06 4.7E-11 75.0 18.0 165 117-283 250-524 (582)
273 3v9f_A Two-component system se 98.7 0.00015 5.2E-09 64.9 31.1 226 63-301 312-551 (781)
274 3v9f_A Two-component system se 98.7 0.00012 4.2E-09 65.5 30.2 226 63-300 210-461 (781)
275 3p5b_L Low density lipoprotein 98.6 5.5E-05 1.9E-09 62.0 24.6 188 77-277 85-279 (400)
276 1n7d_A LDL receptor, low-densi 98.6 1.3E-06 4.4E-11 76.9 15.1 207 64-282 406-621 (699)
277 4hw6_A Hypothetical protein, I 98.6 0.00011 3.7E-09 60.9 25.6 215 38-274 163-432 (433)
278 1w6s_A Methanol dehydrogenase 98.6 7.2E-06 2.5E-10 70.6 19.0 165 117-283 245-511 (599)
279 3m0c_C LDL receptor, low-densi 98.5 0.00028 9.6E-09 62.8 28.3 207 63-282 423-639 (791)
280 3amr_A 3-phytase; beta-propell 98.5 3.7E-05 1.3E-09 60.8 19.8 191 74-282 39-271 (355)
281 1kv9_A Type II quinohemoprotei 98.5 3.5E-06 1.2E-10 73.9 15.3 198 75-280 66-338 (668)
282 1k3i_A Galactose oxidase precu 98.5 1.2E-05 4.1E-10 70.5 18.0 224 19-264 254-530 (656)
283 2p9w_A MAL S 1 allergenic prot 98.5 0.00012 4E-09 57.5 21.4 211 59-275 8-265 (334)
284 2ism_A Putative oxidoreductase 98.5 6.6E-05 2.3E-09 60.4 20.5 225 64-301 31-327 (352)
285 3tc9_A Hypothetical hydrolase; 98.5 1.8E-05 6.3E-10 65.5 17.6 152 114-274 138-300 (430)
286 2xbg_A YCF48-like protein; pho 98.4 0.0004 1.4E-08 55.3 30.1 263 4-300 35-304 (327)
287 3s94_A LRP-6, low-density lipo 98.4 0.0002 6.7E-09 62.2 23.2 208 63-282 39-250 (619)
288 3sre_A PON1, serum paraoxonase 98.4 0.00029 1E-08 56.3 22.2 202 64-274 50-297 (355)
289 3m0c_C LDL receptor, low-densi 98.4 0.00035 1.2E-08 62.2 24.4 188 77-277 397-591 (791)
290 2p9w_A MAL S 1 allergenic prot 98.4 9.1E-05 3.1E-09 58.1 18.3 156 115-275 15-215 (334)
291 3kya_A Putative phosphatase; s 98.4 0.00062 2.1E-08 56.9 24.3 252 7-280 141-480 (496)
292 3sov_A LRP-6, low-density lipo 98.4 0.00044 1.5E-08 54.8 22.6 164 64-241 79-246 (318)
293 1flg_A Protein (quinoprotein e 98.3 4.4E-05 1.5E-09 65.8 17.9 187 68-262 250-547 (582)
294 2ad6_A Methanol dehydrogenase 98.3 9.2E-05 3.1E-09 63.7 19.7 186 68-261 239-523 (571)
295 3a9g_A Putative uncharacterize 98.3 0.00046 1.6E-08 55.5 22.7 227 64-301 29-324 (354)
296 3amr_A 3-phytase; beta-propell 98.3 0.00033 1.1E-08 55.5 20.4 166 123-296 39-236 (355)
297 1w6s_A Methanol dehydrogenase 98.2 0.00013 4.5E-09 62.9 18.5 203 75-282 62-349 (599)
298 2vpj_A Kelch-like protein 12; 98.2 0.00091 3.1E-08 52.4 21.3 237 19-279 15-282 (301)
299 2xbg_A YCF48-like protein; pho 98.2 0.0014 4.8E-08 52.1 26.1 191 64-273 122-320 (327)
300 3kya_A Putative phosphatase; s 98.2 0.00066 2.3E-08 56.7 20.6 204 65-278 140-412 (496)
301 2ism_A Putative oxidoreductase 98.2 0.0015 5.1E-08 52.5 22.2 192 63-263 74-333 (352)
302 3ii7_A Kelch-like protein 7; p 98.2 0.00064 2.2E-08 53.4 19.8 231 20-279 13-276 (306)
303 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0033 1.1E-07 54.7 29.7 204 64-282 37-244 (628)
304 1n7d_A LDL receptor, low-densi 98.1 2.2E-05 7.5E-10 69.2 11.7 180 84-276 385-572 (699)
305 2g8s_A Glucose/sorbosone dehyd 98.1 0.0022 7.6E-08 51.5 24.2 231 64-301 18-335 (353)
306 3s94_A LRP-6, low-density lipo 98.0 0.003 1E-07 54.8 23.0 192 77-279 11-206 (619)
307 1zgk_A Kelch-like ECH-associat 98.0 0.0032 1.1E-07 49.5 20.3 234 19-279 25-291 (308)
308 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0073 2.5E-07 52.5 25.1 189 77-277 8-199 (628)
309 2xzh_A Clathrin heavy chain 1; 98.0 0.0037 1.3E-07 48.8 22.7 201 67-282 70-297 (365)
310 2xn4_A Kelch-like protein 2; s 98.0 0.0023 7.7E-08 50.2 19.2 235 19-280 16-281 (302)
311 3sre_A PON1, serum paraoxonase 97.9 0.0027 9.1E-08 50.8 18.7 159 132-301 81-279 (355)
312 3pbp_A Nucleoporin NUP82; beta 97.8 0.0017 5.9E-08 52.6 16.5 149 72-229 29-208 (452)
313 4asc_A Kelch repeat and BTB do 97.8 0.0071 2.4E-07 47.7 20.7 221 38-280 14-282 (315)
314 3s25_A Hypothetical 7-bladed b 97.7 0.0069 2.4E-07 47.4 17.7 144 117-279 57-220 (302)
315 3das_A Putative oxidoreductase 97.6 0.015 5.1E-07 46.4 22.6 230 63-300 31-319 (347)
316 3pbp_A Nucleoporin NUP82; beta 97.6 0.0074 2.5E-07 49.0 17.2 117 64-181 66-208 (452)
317 2xzh_A Clathrin heavy chain 1; 97.6 0.015 5.1E-07 45.5 23.6 227 35-280 87-337 (365)
318 1tl2_A L10, protein (tachylect 97.6 0.0018 6.2E-08 47.5 12.2 143 113-269 41-204 (236)
319 2g8s_A Glucose/sorbosone dehyd 97.6 0.018 6.1E-07 46.3 24.6 59 199-262 272-340 (353)
320 1tl2_A L10, protein (tachylect 97.6 0.0022 7.5E-08 47.1 11.9 109 64-180 41-158 (236)
321 2uvk_A YJHT; unknown function, 97.5 0.013 4.4E-07 47.0 17.7 57 225-283 286-350 (357)
322 3a9g_A Putative uncharacterize 97.5 0.027 9.4E-07 45.2 24.8 230 7-263 31-330 (354)
323 3das_A Putative oxidoreductase 97.5 0.024 8.2E-07 45.2 18.1 144 154-301 31-214 (347)
324 1bpo_A Protein (clathrin); cla 97.4 0.04 1.4E-06 45.0 24.0 226 35-279 86-335 (494)
325 2woz_A Kelch repeat and BTB do 97.4 0.032 1.1E-06 43.9 23.1 224 39-280 26-292 (318)
326 2vpj_A Kelch-like protein 12; 97.3 0.034 1.2E-06 43.3 18.0 148 122-279 61-235 (301)
327 1bpo_A Protein (clathrin); cla 97.2 0.066 2.3E-06 43.7 24.4 201 67-282 69-296 (494)
328 2xn4_A Kelch-like protein 2; s 97.2 0.055 1.9E-06 42.1 17.1 153 19-189 62-233 (302)
329 3s25_A Hypothetical 7-bladed b 97.2 0.058 2E-06 42.2 22.5 198 38-276 38-256 (302)
330 1cru_A Protein (soluble quinop 97.1 0.086 2.9E-06 43.9 21.0 109 155-263 27-162 (454)
331 3ei3_A DNA damage-binding prot 97.1 0.18 6E-06 47.3 28.6 273 4-295 553-892 (1158)
332 1cru_A Protein (soluble quinop 97.1 0.068 2.3E-06 44.5 17.9 99 113-211 27-157 (454)
333 3ii7_A Kelch-like protein 7; p 96.9 0.096 3.3E-06 40.8 18.2 186 77-279 14-229 (306)
334 1zgk_A Kelch-like ECH-associat 96.9 0.1 3.5E-06 40.8 17.3 189 74-279 24-244 (308)
335 3ott_A Two-component system se 96.8 0.25 8.6E-06 44.1 26.2 214 63-300 21-243 (758)
336 2be1_A Serine/threonine-protei 96.8 0.0028 9.7E-08 50.2 6.3 116 76-195 11-140 (339)
337 1xi4_A Clathrin heavy chain; a 96.7 0.19 6.6E-06 47.5 18.4 202 68-282 70-296 (1630)
338 2uvk_A YJHT; unknown function, 96.7 0.13 4.3E-06 41.2 15.7 95 74-175 19-128 (357)
339 2zwa_A Leucine carboxyl methyl 96.6 0.36 1.2E-05 42.6 21.1 108 74-187 451-579 (695)
340 4asc_A Kelch repeat and BTB do 96.6 0.19 6.6E-06 39.3 17.9 138 38-190 68-226 (315)
341 1xi4_A Clathrin heavy chain; a 96.4 0.42 1.4E-05 45.3 18.6 207 63-279 105-335 (1630)
342 2woz_A Kelch repeat and BTB do 96.3 0.16 5.6E-06 39.8 13.9 136 39-189 80-235 (318)
343 2wg3_C Hedgehog-interacting pr 96.2 0.42 1.4E-05 39.8 22.8 111 64-175 14-159 (463)
344 2zwa_A Leucine carboxyl methyl 96.1 0.69 2.4E-05 40.8 19.6 201 73-279 396-639 (695)
345 2be1_A Serine/threonine-protei 95.9 0.045 1.5E-06 43.4 8.7 112 125-242 11-139 (339)
346 3sbq_A Nitrous-oxide reductase 95.9 0.088 3E-06 44.4 10.5 100 156-263 324-453 (638)
347 3ott_A Two-component system se 95.5 1.3 4.5E-05 39.5 27.4 214 63-300 62-290 (758)
348 2wg3_C Hedgehog-interacting pr 94.2 1.2 4.1E-05 37.1 12.9 108 155-264 14-158 (463)
349 3sbq_A Nitrous-oxide reductase 93.1 0.61 2.1E-05 39.5 9.1 123 64-187 323-480 (638)
350 3ei3_A DNA damage-binding prot 92.9 6.2 0.00021 37.2 29.0 113 113-231 514-634 (1158)
351 3qhy_B Beta-lactamase inhibito 91.4 3.9 0.00013 31.4 15.0 187 64-278 63-249 (282)
352 4gq2_M Nucleoporin NUP120; bet 91.3 8.8 0.0003 35.3 23.7 38 156-193 237-274 (950)
353 3q6k_A 43.2 kDa salivary prote 87.5 10 0.00034 30.6 17.0 161 135-300 124-335 (381)
354 3qhy_B Beta-lactamase inhibito 87.0 8.8 0.0003 29.4 13.7 183 65-275 25-207 (282)
355 3zwu_A Alkaline phosphatase PH 86.5 1.9 6.5E-05 37.1 7.0 55 246-301 477-543 (592)
356 4hvt_A Ritya.17583.B, post-pro 86.3 17 0.00059 32.2 18.0 180 116-299 132-360 (711)
357 3zwu_A Alkaline phosphatase PH 86.3 3.8 0.00013 35.3 8.7 58 156-213 477-546 (592)
358 3uc1_A DNA gyrase subunit A; D 85.3 12 0.00041 29.4 20.6 120 63-184 94-227 (327)
359 4a9v_A PHOX; hydrolase, beta-p 83.8 7.8 0.00027 33.1 9.3 60 155-214 476-547 (592)
360 1suu_A DNA gyrase subunit A; t 83.6 14 0.00048 28.8 24.1 197 73-275 6-231 (312)
361 4a9v_A PHOX; hydrolase, beta-p 81.5 5.3 0.00018 34.1 7.4 56 245-301 476-543 (592)
362 3kci_A Probable E3 ubiquitin-p 81.1 20 0.00068 28.9 17.4 145 123-274 61-240 (389)
363 1sqj_A OXG-RCBH, oligoxylogluc 79.1 36 0.0012 30.6 23.4 161 4-175 14-190 (789)
364 3f7f_A Nucleoporin NUP120; nuc 78.7 20 0.00068 31.7 10.2 36 157-194 224-259 (729)
365 3no0_A DNA gyrase subunit A; D 78.6 20 0.00068 27.4 23.2 197 63-275 23-246 (276)
366 4fhn_B Nucleoporin NUP120; pro 76.7 52 0.0018 31.1 18.2 38 156-193 239-276 (1139)
367 4fhn_B Nucleoporin NUP120; pro 73.8 10 0.00035 35.7 7.9 36 114-149 239-274 (1139)
368 3no0_A DNA gyrase subunit A; D 73.6 28 0.00095 26.6 20.5 120 63-183 115-244 (276)
369 2zux_A YESW protein; beta-prop 71.5 48 0.0016 28.4 20.6 97 177-282 293-407 (591)
370 3uc1_A DNA gyrase subunit A; D 67.1 44 0.0015 26.2 23.4 205 64-275 42-279 (327)
371 1wp5_A Topoisomerase IV; broke 67.0 44 0.0015 26.2 25.5 205 64-275 39-277 (323)
372 1suu_A DNA gyrase subunit A; t 66.0 45 0.0015 25.9 25.0 163 64-233 47-231 (312)
373 3f7f_A Nucleoporin NUP120; nuc 63.6 56 0.0019 29.0 9.5 33 115-149 224-256 (729)
374 3b7f_A Glycosyl hydrolase, BNR 63.3 56 0.0019 26.1 26.2 142 64-210 115-290 (394)
375 1zi0_A DNA gyrase subunit A; b 62.7 52 0.0018 25.5 24.6 206 64-275 42-277 (307)
376 3b7f_A Glycosyl hydrolase, BNR 58.4 69 0.0024 25.6 22.9 183 77-272 24-259 (394)
377 1wp5_A Topoisomerase IV; broke 54.1 77 0.0026 24.8 22.2 194 73-275 3-225 (323)
378 3q6k_A 43.2 kDa salivary prote 53.0 89 0.003 25.2 20.9 172 37-210 123-336 (381)
379 1q47_A Semaphorin 3A; beta pro 52.8 45 0.0015 28.0 7.1 74 65-138 405-487 (495)
380 1zi0_A DNA gyrase subunit A; b 51.7 82 0.0028 24.4 20.3 84 58-142 141-225 (307)
381 1zvt_A Topoisomerase IV subuni 50.6 77 0.0026 23.8 13.1 120 64-185 33-163 (256)
382 4gq2_M Nucleoporin NUP120; bet 49.7 1.6E+02 0.0055 27.2 23.7 37 113-149 236-272 (950)
383 4gz8_A Semaphorin-3A; multi-do 41.4 78 0.0027 27.8 7.0 62 77-138 431-495 (667)
384 2zuy_A YESX protein; beta-prop 40.2 1.8E+02 0.0063 25.1 18.5 98 176-282 296-411 (620)
385 3mez_B Mannose-specific lectin 39.7 71 0.0024 20.2 10.6 11 201-211 59-69 (113)
386 3l6v_A GYRA, DNA gyrase subuni 38.7 1.5E+02 0.0051 23.7 20.9 80 63-142 149-264 (370)
387 3al9_A Plexin-A2; beta-propell 37.9 61 0.0021 27.6 5.7 73 65-138 401-476 (539)
388 1zvu_A Topoisomerase IV subuni 37.7 2.2E+02 0.0074 25.3 10.3 74 111-185 552-633 (716)
389 3nvq_A Semaphorin-7A; beta-pro 36.1 1.2E+02 0.0042 26.1 7.2 62 77-138 382-444 (590)
390 4hvt_A Ritya.17583.B, post-pro 35.0 2.4E+02 0.0082 25.0 22.6 97 174-274 318-429 (711)
391 2cn3_A Xyloglucanase, beta-1,4 32.8 2.6E+02 0.009 24.8 25.2 117 5-132 23-152 (737)
392 3l6v_A GYRA, DNA gyrase subuni 32.3 1.9E+02 0.0066 23.1 26.4 120 63-184 45-179 (370)
393 2zux_A YESW protein; beta-prop 31.7 2.5E+02 0.0085 24.2 17.9 25 62-86 177-202 (591)
394 3al9_A Plexin-A2; beta-propell 31.7 2.4E+02 0.0082 24.0 8.3 68 200-270 402-476 (539)
395 1q47_A Semaphorin 3A; beta pro 31.2 1.7E+02 0.0057 24.6 7.3 66 115-180 406-487 (495)
396 1sqj_A OXG-RCBH, oligoxylogluc 30.3 3E+02 0.01 24.7 17.4 149 112-265 14-190 (789)
397 1zso_A Hypothetical protein; s 28.3 1.5E+02 0.005 20.6 5.4 49 248-296 113-161 (164)
398 3a0c_A Mannose/sialic acid-bin 27.4 1.2E+02 0.004 19.0 11.3 14 248-261 85-98 (110)
399 3nvq_A Semaphorin-7A; beta-pro 26.2 2.1E+02 0.0072 24.7 7.0 55 126-180 382-444 (590)
400 1olz_A Semaphorin 4D; developm 25.6 2.2E+02 0.0074 25.1 7.2 71 65-138 398-477 (663)
401 3oky_B Putative uncharacterize 22.3 2.1E+02 0.0071 24.6 6.2 74 66-139 405-496 (565)
402 4d9s_A UVB-resistance protein 22.3 3E+02 0.01 22.0 20.7 194 65-274 122-356 (406)
403 3kvp_A Uncharacterized protein 21.7 57 0.0019 18.6 1.9 17 33-49 36-52 (72)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-47 Score=307.10 Aligned_cols=272 Identities=17% Similarity=0.197 Sum_probs=235.7
Q ss_pred CCceeEEEeeeecCC-CccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEE
Q 022184 3 GGGTVTCGSWIKRPE-NVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCS 81 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 81 (301)
...+|++++|+++.. +..++++|+ .|+.+++|+++...... ...+.+|...|.+++|++++..++++
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs------~D~~v~vW~~~~~~~~~------~~~l~gh~~~v~~~~~~~~~~~l~s~ 98 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGS------LDDLVKVWKWRDERLDL------QWSLEGHQLGVVSVDISHTLPIAASS 98 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEE------TTSCEEEEEEETTEEEE------EEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEc------CCCCEEEEECCCCCeee------eeeeccCCCCEEEEEECCCCCEEEEE
Confidence 467899999997632 356788766 77888999987543221 34578999999999999999999999
Q ss_pred ecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEE
Q 022184 82 TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMD 161 (301)
Q Consensus 82 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~ 161 (301)
+.|++|++||+.+++....+. .+...+.+++|+|++++|++++.|+.|++|++++++....+..+...+.+++
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~-------~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSID-------AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-------CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEE
T ss_pred eCCCcEEEEECCCCCEEEEEe-------CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEE
Confidence 999999999998876533221 2456788999999999999999999999999999988888888888999999
Q ss_pred ecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee
Q 022184 162 FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (301)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 241 (301)
|+|++++|++++.|+.|++||+++++.+..+..+ ..+|.+++|+|+++. +++++.|+.|++||+++++....+.
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spd~~~-----l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH-AMPIRSLTFSPDSQL-----LVTASDDGYIKIYDVQHANLAGTLS 245 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCCCEEEECTTSCE-----EEEECTTSCEEEEETTTCCEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc-CCceeEEEEcCCCCE-----EEEEcCCCeEEEEECCCcceeEEEc
Confidence 9999999999999999999999999998888765 457999999999997 7899999999999999999888899
Q ss_pred ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 242 LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 242 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.|...|.+++|+|++++|++++.|+.|++||+.+++.+..+ ..| ...|.+++|+|||+
T Consensus 246 ~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~h-~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 246 GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF-FDH-QDQVWGVKYNGNGS 303 (321)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCC-SSCEEEEEECTTSS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE-cCC-CCcEEEEEECCCCC
Confidence 99999999999999999999999999999999999988877 578 89999999999984
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-46 Score=310.60 Aligned_cols=272 Identities=12% Similarity=0.110 Sum_probs=236.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|+|+ ..++++|+ .|+.+++|++.... ....+.+|.+.|.+++|+|++++|++++
T Consensus 107 h~~~V~~~~~~p~---~~~l~s~s------~Dg~i~vwd~~~~~--------~~~~l~~h~~~V~~v~~~~~~~~l~sgs 169 (410)
T 1vyh_C 107 HRSPVTRVIFHPV---FSVMVSAS------EDATIKVWDYETGD--------FERTLKGHTDSVQDISFDHSGKLLASCS 169 (410)
T ss_dssp CSSCEEEEEECSS---SSEEEEEE------SSSCEEEEETTTCC--------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCcEEEEEEcCC---CCEEEEEe------CCCeEEEEECCCCc--------EEEEEeccCCcEEEEEEcCCCCEEEEEe
Confidence 3578999999987 66888866 67888999986543 1345789999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|++|++||+.+.+... ....|...|.+++|+|++++|++|+.|+.|++||++++..+..+..|...|.+++|
T Consensus 170 ~D~~i~iwd~~~~~~~~-------~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 242 (410)
T 1vyh_C 170 ADMTIKLWDFQGFECIR-------TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242 (410)
T ss_dssp TTSCCCEEETTSSCEEE-------CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCCeEEEEeCCCCceeE-------EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEE
Confidence 99999999998765422 22347789999999999999999999999999999999988888889899999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcce---------------EEEEEEeCCcceEE
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF---------------LFCTVQRGDKALLA 227 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~ 227 (301)
+|++++|++++.|+.|++||+++++....+..+. ..|.+++|+|++.+.. -..+++++.|+.|+
T Consensus 243 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~ 321 (410)
T 1vyh_C 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHR-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321 (410)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCceeeEecCCC-ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEE
Confidence 9999999999999999999999999888887654 5799999999742100 00168899999999
Q ss_pred EEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 228 ~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+||+++++++..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+ .+| ...|++++|+|+++
T Consensus 322 iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~-~~h-~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 322 MWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL-NAH-EHFVTSLDFHKTAP 393 (410)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE-ECC-SSCEEEEEECSSSS
T ss_pred EEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE-cCC-CCcEEEEEEcCCCC
Confidence 9999999999999999999999999999999999999999999999999888776 678 89999999999974
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-46 Score=299.41 Aligned_cols=267 Identities=11% Similarity=0.133 Sum_probs=231.3
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..+|++++|+|+ +.++++|+ .|+.+++|++.... ....+..|..+|.+++|+|++++|++++.
T Consensus 13 ~~~V~~~~fsp~---~~~l~s~~------~dg~v~lWd~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 75 (304)
T 2ynn_A 13 SDRVKGIDFHPT---EPWVLTTL------YSGRVELWNYETQV--------EVRSIQVTETPVRAGKFIARKNWIIVGSD 75 (304)
T ss_dssp CSCEEEEEECSS---SSEEEEEE------TTSEEEEEETTTTE--------EEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEECCC---CCEEEEEc------CCCcEEEEECCCCc--------eeEEeeccCCcEEEEEEeCCCCEEEEECC
Confidence 578999999988 67888766 67888999886432 13456789999999999999999999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc-eecccccCCccEEEEEe
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-IILDEPKAHKSVLDMDF 162 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~i~~~~~ 162 (301)
|++|++||+.+++....+ ..|...|.+++|+|++++|++|+.|++|++||++++. ....+..|...|.+++|
T Consensus 76 d~~i~vwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDF-------EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp TSEEEEEETTTCCEEEEE-------ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEE
T ss_pred CCEEEEEECCCCcEEEEE-------eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEE
Confidence 999999999887653222 2477899999999999999999999999999998774 44556778889999999
Q ss_pred cC-CCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEcc--CCCcceEEEEEEeCCcceEEEEEccCceEeee
Q 022184 163 SL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK--DGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239 (301)
Q Consensus 163 ~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 239 (301)
+| ++.+|++++.|++|++||++++.....+..++...+..+.|+| ++.+ +++++.|+.|++||+++++++..
T Consensus 149 ~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----l~s~s~D~~i~iWd~~~~~~~~~ 223 (304)
T 2ynn_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY-----MITASDDLTIKIWDYQTKSCVAT 223 (304)
T ss_dssp CTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCE-----EEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCE-----EEEEcCCCeEEEEeCCCCcccee
Confidence 99 6789999999999999999988877777766666799999987 4555 68899999999999999999999
Q ss_pred eeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 240 KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 240 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+ ..| ...+.+++|+|+|+
T Consensus 224 ~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~-~~~-~~~~~~~~~~~~~~ 283 (304)
T 2ynn_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL-NVG-LERSWCIATHPTGR 283 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCS-SSSEEEEEECTTCG
T ss_pred eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeec-cCC-CccEEEEEECCCCC
Confidence 9999999999999999999999999999999999999988877 466 78999999999873
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.9e-45 Score=294.33 Aligned_cols=275 Identities=11% Similarity=0.086 Sum_probs=218.5
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEee-----eCCCcceeeeCCceeccccccCCcceEEEECCCCCeE
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFS-----FDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDF 78 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 78 (301)
...|.+++|+|| +.+++.++ +.++++|+ ++...... ..........|...|.+++|+|++ .|
T Consensus 30 ~~~v~~~~fs~d---G~~l~~~s-------d~~~r~Wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~d~-~l 96 (344)
T 4gqb_B 30 ERQLEAARYRSD---GALLLGAS-------SLSGRCWAGSLWLFKDPCAAP--NEGFCSAGVQTEAGVADLTWVGER-GI 96 (344)
T ss_dssp CSEEEEEEECTT---SCEEEEEE-------CCSSSCCCEEEEEESSGGGTT--CGGGCSEEEEESSCEEEEEEETTT-EE
T ss_pred cCCEEEEEECCC---CCEEEEEe-------CCceEEeeceeeeeccccccC--CcceeeeeeccCCCEEEEEEeCCC-eE
Confidence 356999999988 56776543 33345553 22111000 000111223467789999999985 68
Q ss_pred EEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEE
Q 022184 79 VCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVL 158 (301)
Q Consensus 79 ~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~ 158 (301)
++++.||+|++||+++++...... .....|...|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|...|.
T Consensus 97 ~~~s~dg~v~lWd~~~~~~~~~~~---~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 97 LVASDSGAVELWELDENETLIVSK---FCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp EEEETTSEEEEEEECTTSSCEEEE---EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEEECCCEEEEEeccCCCceeEee---ccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 899999999999998876533221 11224788999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEee-cCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE
Q 022184 159 DMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTR-NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236 (301)
Q Consensus 159 ~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 236 (301)
+++|+|++. +|++++.|++|++||+++++....+.. .+...+.+++|+|++..+ +++++.|+.|++||++++++
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----l~sg~~dg~v~~wd~~~~~~ 249 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV----FVFGDENGTVSLVDTKSTSC 249 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE----EEEEETTSEEEEEESCC--C
T ss_pred EEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcc----eEEeccCCcEEEEECCCCcE
Confidence 999999885 789999999999999999998887653 234468999999977652 57889999999999999999
Q ss_pred eeeeeccCCCcEEEEEcCCC-CEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 237 IGHKRLLRKPASVLSISLDG-KYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 237 ~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+..+..|...|++++|+|++ ++|++|+.|+.|+|||+.++++... .+| ...|++++|+|+|+
T Consensus 250 ~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~--~~H-~~~V~~v~~sp~~~ 312 (344)
T 4gqb_B 250 VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS--QAH-RDFVRDATWSPLNH 312 (344)
T ss_dssp CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE--CCC-SSCEEEEEECSSST
T ss_pred EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE--cCC-CCCEEEEEEeCCCC
Confidence 99999999999999999998 6899999999999999999987654 678 89999999999974
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-44 Score=291.26 Aligned_cols=270 Identities=15% Similarity=0.190 Sum_probs=230.0
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+ +.++++|+ .|+.+++|+...... ...+..|...|.+++|+|++++|++++
T Consensus 54 H~~~v~~~~~s~d---~~~l~s~s------~Dg~v~iWd~~~~~~--------~~~~~~~~~~v~~~~~s~~~~~l~s~~ 116 (340)
T 1got_B 54 HLAKIYAMHWGTD---SRLLLSAS------QDGKLIIWDSYTTNK--------VHAIPLRSSWVMTCAYAPSGNYVACGG 116 (340)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTTEEEEEETTTCCE--------EEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceEEEEECCC---CCEEEEEe------CCCcEEEEECCCCCc--------ceEeecCCccEEEEEECCCCCEEEEEe
Confidence 4578999999987 67888766 678889998754331 234677899999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++|++.+.+....... ....|...|.++.|++++. +++++.|+.|++||+++++.+..+..|...|.+++|
T Consensus 117 ~d~~v~iw~~~~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 192 (340)
T 1got_B 117 LDNICSIYNLKTREGNVRVSR---ELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSL 192 (340)
T ss_dssp TTCEEEEEETTTCSBSCEEEE---EEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCCeEEEEECccCCCcceeEE---EecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEE
Confidence 999999999977543222111 1224778999999999875 889999999999999999988888889999999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
+|++++|++++.|+.|++||+++++....+..|. ..|.+++|+|+++. +++++.|+.|++||+++++.+..+..
T Consensus 193 ~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~p~~~~-----l~s~s~d~~v~iwd~~~~~~~~~~~~ 266 (340)
T 1got_B 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTGHE-SDINAICFFPNGNA-----FATGSDDATCRLFDLRADQELMTYSH 266 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCc-CCEEEEEEcCCCCE-----EEEEcCCCcEEEEECCCCcEEEEEcc
Confidence 9999999999999999999999999988887654 46999999999997 78999999999999999887655543
Q ss_pred c--CCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 243 L--RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ~--~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
. ...+.+++|+|++++|++|+.|+.|++||+.+++....+ .+| ..+|.+++|+|||+
T Consensus 267 ~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~-~~h-~~~v~~~~~s~dg~ 325 (340)
T 1got_B 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL-AGH-DNRVSCLGVTDDGM 325 (340)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECC-SSCEEEEEECTTSS
T ss_pred CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe-ecC-CCcEEEEEEcCCCC
Confidence 2 247999999999999999999999999999998887776 678 89999999999985
No 6
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-44 Score=293.90 Aligned_cols=280 Identities=13% Similarity=0.136 Sum_probs=220.0
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
...|+|++|+|| +.++|.|+.....--++.+++|+...... .........+|...|.+++|+|+++ +++++.
T Consensus 42 ~~~V~~v~fSpD---G~~las~s~d~~~~wd~~v~~~~~~~~~~----~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~ 113 (357)
T 4g56_B 42 EVQIGAVRYRRD---GALLLAASSLSSRTWGGSIWVFKDPEGAP----NESLCTAGVQTEAGVTDVAWVSEKG-ILVASD 113 (357)
T ss_dssp CSEEEEEEECSS---SCEEEEEECSSSSSCCEEEEEESSCC-------CGGGCSEEEECSSCEEEEEEETTTE-EEEEET
T ss_pred cCCEEEEEECCC---CCEEEEEcCCCCccccCeEEEEECCCCCc----ceeEecccCCCCCCEEEEEEcCCCC-EEEEEC
Confidence 567999999998 77888876543222256666665432221 1111223457889999999999985 556788
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEec
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 163 (301)
||+|++||+.+++...... .....|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 114 dg~v~lWd~~~~~~~~~~~---~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNK---FAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp TSCEEEC--------CCCC---EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCEEEEeeccccceeEEEe---eccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 9999999998776422211 1122477899999999999999999999999999999999988888899999999999
Q ss_pred CCCc-EEEEEeCCCcEEEEeCCCCceEEEEee-cCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee
Q 022184 164 LDSE-FLATTSTDGSARIWKTEDGVAWTFLTR-NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (301)
Q Consensus 164 ~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 241 (301)
|++. ++++++.|+.|++||+++++....+.. .+...+.+++|+|++..+ +++++.|+.|++||+++++.+..+.
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~----la~g~~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT----FACGDETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE----EEEEESSSCEEEEESSCGGGCEEEC
T ss_pred cCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce----EEEeecccceeEEECCCCcEeEEEe
Confidence 9875 789999999999999999887766543 334569999999987652 5778899999999999999888899
Q ss_pred ccCCCcEEEEEcCCC-CEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEcc-CCC
Q 022184 242 LLRKPASVLSISLDG-KYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP-TQR 301 (301)
Q Consensus 242 ~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~ 301 (301)
.|...|++++|+|++ ++|++++.|+.|+|||+++++.+..+ +| ...|++++|+| |++
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--~H-~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL--SH-RDFVTGVAWSPLDHS 325 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--CC-SSCEEEEEECSSSTT
T ss_pred ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--CC-CCCEEEEEEeCCCCC
Confidence 999999999999987 68999999999999999999988764 68 89999999998 663
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-43 Score=288.60 Aligned_cols=273 Identities=18% Similarity=0.204 Sum_probs=229.4
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|+|+ +.++++|+ .|+.+++|+...... ...+..|...|.+++|+|++.+|++++
T Consensus 63 H~~~V~~~~~s~d---~~~l~s~s------~Dg~v~vWd~~~~~~--------~~~~~~~~~~v~~~~~sp~g~~lasg~ 125 (354)
T 2pbi_B 63 HGNKVLCMDWCKD---KRRIVSSS------QDGKVIVWDSFTTNK--------EHAVTMPCTWVMACAYAPSGCAIACGG 125 (354)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSEEEEEETTTCCE--------EEEEECSSSCCCEEEECTTSSEEEEES
T ss_pred CCCeEEEEEECCC---CCEEEEEe------CCCeEEEEECCCCCc--------ceEEecCCCCEEEEEECCCCCEEEEee
Confidence 4678999999987 57888866 778889998654331 234567888999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.+++|++......... ........|...|.+++|+|++..|++++.|++|++||+++++.+..+..|...|.+++|
T Consensus 126 ~d~~i~v~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~ 204 (354)
T 2pbi_B 126 LDNKCSVYPLTFDKNENMA-AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL 204 (354)
T ss_dssp TTSEEEEEECCCCTTCCSG-GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCCCEEEEEEecccccccc-ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEE
Confidence 9999999998754321111 001112247789999999999999999999999999999999998888889999999999
Q ss_pred cC--CCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeee
Q 022184 163 SL--DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK 240 (301)
Q Consensus 163 ~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 240 (301)
+| ++++|++++.|+.|++||+++++++..+..|. ..|.+++|+|++.. +++++.|+.|++||+++.+.+..+
T Consensus 205 ~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~p~~~~-----l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 205 APSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHE-SDVNSVRYYPSGDA-----FASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp CCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEE
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCeEEEEEeCCCCE-----EEEEeCCCeEEEEECCCCcEEEEE
Confidence 87 56899999999999999999999988887654 47999999999987 789999999999999988776555
Q ss_pred ecc--CCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 241 RLL--RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 241 ~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
..+ ...+.+++|+|++++|++++.|+.|++||+.+++.+..+ .+| ...|++++|+|||+
T Consensus 279 ~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l-~~h-~~~v~~l~~spdg~ 339 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGH-ENRVSTLRVSPDGT 339 (354)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE-CCC-SSCEEEEEECTTSS
T ss_pred cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEE-ECC-CCcEEEEEECCCCC
Confidence 433 346889999999999999999999999999998887766 678 89999999999985
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4e-43 Score=281.18 Aligned_cols=268 Identities=16% Similarity=0.237 Sum_probs=229.9
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+ +.++++|+ .++.+++|+..... ....+.+|...|.+++|+|++++|++++
T Consensus 22 h~~~v~~~~~s~~---~~~l~s~~------~dg~i~iw~~~~~~--------~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 84 (312)
T 4ery_A 22 HTKAVSSVKFSPN---GEWLASSS------ADKLIKIWGAYDGK--------FEKTISGHKLGISDVAWSSDSNLLVSAS 84 (312)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSCEEEEETTTCC--------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCcEEEEEECCC---CCEEEEee------CCCeEEEEeCCCcc--------cchhhccCCCceEEEEEcCCCCEEEEEC
Confidence 4578999999987 66788765 67788999875432 1335678999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++||+++++....+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|..+|.+++|
T Consensus 85 ~d~~i~vwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 85 DDKTLKIWDVSSGKCLKTL-------KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp TTSEEEEEETTTCCEEEEE-------ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CCCEEEEEECCCCcEEEEE-------cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEE
Confidence 9999999999877653222 236788999999999999999999999999999999988888888899999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
+|++++|++++.|+.|++||+++++.+..+...+...+..++|+|++++ +++++.|+.|++||+++++.+..+..
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY-----ILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE-----EEEEETTTEEEEEETTTTEEEEEECS
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE-----EEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 9999999999999999999999999888877666667999999999997 78889999999999999998888877
Q ss_pred cCCCcEE--EEE-cCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 243 LRKPASV--LSI-SLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ~~~~v~~--~~~-s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
|...... ..+ .+++++|++++.||.|++||+.+++.+..+ .+| ...|.+++|+|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h-~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 233 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL-QGH-TDVVISTACHPTEN 292 (312)
T ss_dssp SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEE-CCC-SSCEEEEEECSSSS
T ss_pred cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhh-hcc-CCcEEEEeecCcCC
Confidence 7654322 234 467899999999999999999999988777 678 89999999999874
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.8e-43 Score=290.54 Aligned_cols=275 Identities=17% Similarity=0.209 Sum_probs=223.9
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
..++|+|++|+|+ +.++++|+ .|+.+++|+..... ....+..|...|.+++|+|++++|++++
T Consensus 65 H~~~V~~~~~sp~---~~~l~s~s------~D~~v~iWd~~~~~--------~~~~~~~h~~~v~~~~~s~~g~~las~~ 127 (380)
T 3iz6_a 65 HSGKVYSLDWTPE---KNWIVSAS------QDGRLIVWNALTSQ--------KTHAIKLHCPWVMECAFAPNGQSVACGG 127 (380)
T ss_dssp CSSCEEEEEECTT---SSCEEEEE------TTSEEEEEETTTTE--------EEEEEECCCTTCCCCEECTTSSEEEECC
T ss_pred cccEEEEEEEcCC---CCEEEEEe------CCCeEEEEECCCCc--------cceEEecCCCCEEEEEECCCCCEEEEee
Confidence 4678999999987 66788766 67888999875432 1345678999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC-CCEEEEeecCCeEEEEeCCCcceeccc-----ccCCcc
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLRIILDE-----PKAHKS 156 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~-----~~~~~~ 156 (301)
.|+.+++|++..................|.+.+.++.|+|+ +..|++|+.|++|++||+++++.+..+ ..|...
T Consensus 128 ~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~ 207 (380)
T 3iz6_a 128 LDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTAD 207 (380)
T ss_dssp SSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSC
T ss_pred CCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccC
Confidence 99999999997643211111111223357788999999996 567999999999999999998876554 456778
Q ss_pred EEEEEecC-CCcEEEEEeCCCcEEEEeCCC-CceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc
Q 022184 157 VLDMDFSL-DSEFLATTSTDGSARIWKTED-GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234 (301)
Q Consensus 157 i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 234 (301)
|.+++|+| ++++|++++.|+.|++||++. ++.+..+..| ...|.+++|+|++.. +++++.|+.|++||++++
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~-----l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH-EGDINSVKFFPDGQR-----FGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC-SSCCCEEEECTTSSE-----EEEECSSSCEEEEETTTT
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc-CCCeEEEEEecCCCe-----EEEEcCCCeEEEEECCCC
Confidence 99999987 888999999999999999984 4666666655 457999999999997 799999999999999999
Q ss_pred eEeeeeeccC-------CCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc---cccccCccEEEEEEccCCC
Q 022184 235 NKIGHKRLLR-------KPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS---KRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 235 ~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~---~~~~~~~~v~~~~~spdg~ 301 (301)
+.+..+..+. ..+++++|+|+|++|++|+.||.|++||+.+++....+ ..+| ...|++++|+|||+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h-~~~v~~l~~s~dg~ 357 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSH-EGRISCLGLSSDGS 357 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSC-CCCCCEEEECSSSS
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCC-CCceEEEEECCCCC
Confidence 8876654432 24899999999999999999999999999988766543 2568 88999999999985
No 10
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.9e-44 Score=290.30 Aligned_cols=286 Identities=17% Similarity=0.233 Sum_probs=219.1
Q ss_pred CCceeEEEeeeecCCCccEEEecCCcc-ccCCcCceeEeeeCCCcceeee--CCceeccccccCCcceEEEECCCCCeEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSR-ASSSPSVLEIFSFDPKTTSVYT--SPLVTYVFDESEGDPMTIAVNPSGDDFV 79 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 79 (301)
.+.||+|++|+|+ +.+++.|+++. ..|.+|.|++|+++........ .......+.+|.+.|.+++++ ++.++
T Consensus 13 ~g~PV~sv~fs~d---g~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~ 87 (365)
T 4h5i_A 13 VGYPAYGAKFLNN---DTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIIL 87 (365)
T ss_dssp CSSCEEEEEEEET---TEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEE
T ss_pred CCCCEEEEEEeCC---CcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEE
Confidence 4689999999998 67888876543 3578999999999876543211 122344678899999998875 55666
Q ss_pred EE-----------ecCCcEEEEEEcCCccccccccc--cCCCCCCCCCeeEEEEeeCCCEEEEe--ecCCeEEEEeCCCc
Q 022184 80 CS-----------TTNGGCKLFEVYGGATDINLLAK--KMPPLQDAGPQKCLSFSVDGSRFAAG--GVDGHLRIMHWPSL 144 (301)
Q Consensus 80 ~~-----------~~d~~i~~w~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~--~~dg~i~v~d~~~~ 144 (301)
++ +.|+.+++|++............ ......+...+.+++|||||++++++ +.|++|++||++++
T Consensus 88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 55 35788999999876543322211 11222344678999999999998654 47899999999999
Q ss_pred ceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEE-eecCCCCeeEEEEccCCCcceEEEEEEeCCc
Q 022184 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFL-TRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (301)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 223 (301)
+.+..+ .|...|.+++|+|||++|++++. +.+++|+..+++.+... ...+...+.+++|+|+++. +++++.+
T Consensus 168 ~~~~~~-~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~-----l~~~s~d 240 (365)
T 4h5i_A 168 TEKFEI-ETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV-----LIAASLK 240 (365)
T ss_dssp EEEEEE-ECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE-----EEEEEES
T ss_pred cEEEEe-CCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE-----EEEEecC
Confidence 887766 46778999999999999999985 45677777777665443 3345557999999999997 4555444
Q ss_pred c----eEEEEEccCceE----eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEE
Q 022184 224 A----LLAVYDISTWNK----IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVE 295 (301)
Q Consensus 224 ~----~i~~~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~ 295 (301)
+ .+.+||+..... ...+..|...|++++|+|||++||+|+.|+.|+|||+++++++..+..+| ..+|++++
T Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH-~~~V~~v~ 319 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH-SFAITEVT 319 (365)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS-SSCEEEEE
T ss_pred CcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc-cCCEEEEE
Confidence 4 688899876653 34566788899999999999999999999999999999999988776889 99999999
Q ss_pred EccCCC
Q 022184 296 FCPTQR 301 (301)
Q Consensus 296 ~spdg~ 301 (301)
|+|||+
T Consensus 320 fSpdg~ 325 (365)
T 4h5i_A 320 ISPDST 325 (365)
T ss_dssp ECTTSC
T ss_pred ECCCCC
Confidence 999986
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=280.13 Aligned_cols=270 Identities=11% Similarity=0.101 Sum_probs=215.0
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
++|++++|+|+ +.++|+|+ .|+.+++|+.+...... ......+|...|.+++|+|++++|++++.|
T Consensus 17 ~~v~~l~~sp~---g~~las~~------~D~~i~iw~~~~~~~~~-----~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 17 SRCWFLAWNPA---GTLLASCG------GDRRIRIWGTEGDSWIC-----KSVLSEGHQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp SCEEEEEECTT---SSCEEEEE------TTSCEEEEEEETTEEEE-----EEEECSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCC---CCEEEEEc------CCCeEEEEEcCCCccee-----eeeeccccCCcEEEEEECCCCCEEEEEECC
Confidence 48999999988 67888866 67788999986543111 112246899999999999999999999999
Q ss_pred CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc---eecccccCCccEEEEE
Q 022184 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR---IILDEPKAHKSVLDMD 161 (301)
Q Consensus 85 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~---~~~~~~~~~~~i~~~~ 161 (301)
+++++|++........ .....|...|.+++|+|++++|++++.|+.|++||++++. .+..+..|...|.+++
T Consensus 83 ~~v~iw~~~~~~~~~~-----~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECV-----TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp SCEEEEEECCC-EEEE-----EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred CcEEEEEccCCCeEEE-----EEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 9999999976642111 1112477899999999999999999999999999997653 3445667888999999
Q ss_pred ecCCCcEEEEEeCCCcEEEEeCCCCceE--EEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc-----
Q 022184 162 FSLDSEFLATTSTDGSARIWKTEDGVAW--TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----- 234 (301)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~----- 234 (301)
|+|++++|++++.|+.|++||+++++.. ..+..| ...|.+++|+|++++ +++++.|+.|++||....
T Consensus 158 ~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h-~~~v~~l~~sp~g~~-----l~s~s~D~~v~iW~~~~~~~~~~ 231 (345)
T 3fm0_A 158 WHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH-ESTVWSLAFDPSGQR-----LASCSDDRTVRIWRQYLPGNEQG 231 (345)
T ss_dssp ECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECTTSSE-----EEEEETTSCEEEEEEECTTCTTC
T ss_pred ECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC-CCceEEEEECCCCCE-----EEEEeCCCeEEEeccccCCCCcc
Confidence 9999999999999999999999887543 455544 557999999999997 789999999999996432
Q ss_pred ----------eEeeeeec-cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCcee--------eccccccccCccEEEEE
Q 022184 235 ----------NKIGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI--------NHWSKRLHLGTSIALVE 295 (301)
Q Consensus 235 ----------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~--------~~~~~~~~~~~~v~~~~ 295 (301)
+.+..+.. |...|.+++|+|++..|++++.|+.|++|+...... ......+| ...|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~ 310 (345)
T 3fm0_A 232 VACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH-SQDVNCVA 310 (345)
T ss_dssp CCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS-SSCEEEEE
T ss_pred ceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc-cCcEeEeE
Confidence 22223333 678899999999999999999999999999875421 11222578 88999999
Q ss_pred EccCC
Q 022184 296 FCPTQ 300 (301)
Q Consensus 296 ~spdg 300 (301)
|+|++
T Consensus 311 ~~p~~ 315 (345)
T 3fm0_A 311 WNPKE 315 (345)
T ss_dssp ECSSS
T ss_pred EeCCC
Confidence 99986
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-42 Score=277.84 Aligned_cols=271 Identities=14% Similarity=0.131 Sum_probs=204.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccc-c-ccCCcceEEEECCCCCeEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVF-D-ESEGDPMTIAVNPSGDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~-~h~~~v~~~~~~~~~~~l~~ 80 (301)
...+|++++|+++ ++|+|+ .|+.+++|++....... ...+ . +|.+.|.+++|+|++++|++
T Consensus 13 h~~~v~~~~~s~~-----~las~~------~D~~i~lw~~~~~~~~~------~~~~~~~~h~~~v~~v~~sp~~~~las 75 (330)
T 2hes_X 13 YKEKIWSFDFSQG-----ILATGS------TDRKIKLVSVKYDDFTL------IDVLDETAHKKAIRSVAWRPHTSLLAA 75 (330)
T ss_dssp CSSCEEEEEEETT-----EEEEEE------SSSCEEEEECSSSCCEE------EEEECTTCCCSCEEEEEECTTSSEEEE
T ss_pred CCCceeeeccCCC-----EEEEEc------CCCEEEEEEecCCCeEE------EEEEecCCccCCEEEEEECCCCCEEEE
Confidence 4678999999965 777765 67888999987543222 1122 3 49999999999999999999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc----ceecccccCCcc
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL----RIILDEPKAHKS 156 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~----~~~~~~~~~~~~ 156 (301)
++.|++|++|+++.................|...|.+++|+|++++|++++.|+.|++||++.. +.+..+..|...
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~ 155 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQD 155 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSC
T ss_pred EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCc
Confidence 9999999999986432100000000112247789999999999999999999999999999432 345566778889
Q ss_pred EEEEEecCCCcEEEEEeCCCcEEEEeCCCC--ceEEEEeecCCCCeeEEEEccC--CCcceEEEEEEeCCcceEEEEEcc
Q 022184 157 VLDMDFSLDSEFLATTSTDGSARIWKTEDG--VAWTFLTRNSDEKIELCRFSKD--GTKPFLFCTVQRGDKALLAVYDIS 232 (301)
Q Consensus 157 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~d~~ 232 (301)
|.+++|+|++++|++++.|++|++||++++ +++..+..| ...|.+++|+|+ +.. +++++.|+.|++||++
T Consensus 156 v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~-----l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 156 VKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGH-EGTVWSSDFDKTEGVFR-----LCSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCSSSSCE-----EEEEETTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCC-CCcEEEEEecCCCCeeE-----EEEEeCCCeEEEEEec
Confidence 999999999999999999999999999876 556666655 457999999999 444 6889999999999987
Q ss_pred Cc--------eEeeeeec-cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCce--eeccccccccCc-cEEEEEEcc
Q 022184 233 TW--------NKIGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME--INHWSKRLHLGT-SIALVEFCP 298 (301)
Q Consensus 233 ~~--------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~-~v~~~~~sp 298 (301)
.+ .....+.. |...|.+++|++++ +|++++.||.|++|+..+++ ........| .. .|.+++|+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h-~~~~v~~v~~~~ 305 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCH-GVYEINVVKWLE 305 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTT-TTSCEEEEEEC-
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccc-ccceEEEEEEec
Confidence 64 23333443 78899999999765 89999999999999998774 233332467 55 899999999
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.2e-42 Score=298.25 Aligned_cols=269 Identities=17% Similarity=0.199 Sum_probs=226.3
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+ +.++|+|+ .|+.++||+.......+ ...+.+|.+.|.+++|+|++++|++++
T Consensus 58 h~~~v~~~~~spd---g~~lasg~------~d~~v~lWd~~~~~~~~------~~~~~~~~~~v~~v~fs~dg~~l~~~~ 122 (611)
T 1nr0_A 58 HSHQTTVAKTSPS---GYYCASGD------VHGNVRIWDTTQTTHIL------KTTIPVFSGPVKDISWDSESKRIAAVG 122 (611)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSEEEEEESSSTTCCE------EEEEECSSSCEEEEEECTTSCEEEEEE
T ss_pred CCCceEEEEECCC---CcEEEEEe------CCCCEEEeECCCCccee------eEeecccCCceEEEEECCCCCEEEEEE
Confidence 4678999999988 78999877 67888999985433221 335678999999999999999999988
Q ss_pred cC----CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCC-EEEEeecCCeEEEEeCCCcceecccccCCccE
Q 022184 83 TN----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGS-RFAAGGVDGHLRIMHWPSLRIILDEPKAHKSV 157 (301)
Q Consensus 83 ~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i 157 (301)
.+ +.|++||. +... .....|...|.+++|+|++. .|++++.|++|++||.++++....+.+|...|
T Consensus 123 ~~~~~~~~v~~wd~--~~~~-------~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V 193 (611)
T 1nr0_A 123 EGRERFGHVFLFDT--GTSN-------GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV 193 (611)
T ss_dssp CCSSCSEEEEETTT--CCBC-------BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE
T ss_pred CCCCceeEEEEeeC--CCCc-------ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCce
Confidence 65 36788873 3221 12235778999999999986 59999999999999999988888888899999
Q ss_pred EEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee------cCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEc
Q 022184 158 LDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR------NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI 231 (301)
Q Consensus 158 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 231 (301)
.+++|+|++++|++++.|++|++||+++++.+..+.. .|...|.+++|+|++++ +++++.|++|++||+
T Consensus 194 ~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-----l~s~s~D~~v~lWd~ 268 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK-----IASASADKTIKIWNV 268 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE-----EEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE-----EEEEeCCCeEEEEeC
Confidence 9999999999999999999999999999998887743 45567999999999997 789999999999999
Q ss_pred cCceEeee-------------------------------------------eeccCCCcEEEEEcCCCCEEEEeeCCCcE
Q 022184 232 STWNKIGH-------------------------------------------KRLLRKPASVLSISLDGKYLAMGSKDGDI 268 (301)
Q Consensus 232 ~~~~~~~~-------------------------------------------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i 268 (301)
++++.+.. +.+|...|++++|+|+|++|++++.|+.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v 348 (611)
T 1nr0_A 269 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHI 348 (611)
T ss_dssp TTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcE
Confidence 87765432 34577889999999999999999999999
Q ss_pred EEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 269 CVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 269 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++||+.+++....+...| ...|.+++|+++++
T Consensus 349 ~~Wd~~~~~~~~~~~~~h-~~~v~~~~~s~~~~ 380 (611)
T 1nr0_A 349 NSWDISTGISNRVFPDVH-ATMITGIKTTSKGD 380 (611)
T ss_dssp EEEETTTCCEEECSSCSC-SSCEEEEEECTTSC
T ss_pred EEEECCCCceeeecccCC-cceEEEEEECCCCc
Confidence 999999998877665678 89999999998763
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.1e-42 Score=274.60 Aligned_cols=271 Identities=11% Similarity=0.114 Sum_probs=224.7
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
..++|++++|+|+. .+++++|+ .|+.+++|++....... ......+.+|...|.+++|+|++++|++++
T Consensus 16 H~~~V~~l~~~~~~--~~~l~s~s------~D~~v~~W~~~~~~~~~---~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 16 HNGWVTSLATSAGQ--PNLLLSAS------RDKTLISWKLTGDDQKF---GVPVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp CSSCEEEEEECSSC--TTEEEEEE------TTSEEEEEEEEEETTEE---EEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ccceEEEEEccCCC--ccEEEEec------CCccEEEecCCCCCccc---cccceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 46889999999652 46888866 77888999986433221 122346789999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|++|++||+.+++....+ ..|...|.+++|+|++++|++++.|+.|++||++. +.+..+..|...|.+++|
T Consensus 85 ~D~~v~~wd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~ 156 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRF-------VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRV 156 (319)
T ss_dssp TTSEEEEEETTTTEEEEEE-------ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEE
T ss_pred CCCEEEEEECCCCCeeEEE-------ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEE
Confidence 9999999999887653222 24778999999999999999999999999999964 455677788899999999
Q ss_pred cCC------CcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE
Q 022184 163 SLD------SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236 (301)
Q Consensus 163 ~~~------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 236 (301)
.|. +..|++++.|+.|++||+++.+....+..|. ..|.+++|+|++++ +++++.|+.|++||+++++.
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~sp~g~~-----l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN-SNINTLTASPDGTL-----IASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC-SCEEEEEECTTSSE-----EEEEETTCEEEEEETTTTEE
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC-CcEEEEEEcCCCCE-----EEEEeCCCeEEEEECCCCcE
Confidence 985 4489999999999999999998888887654 57999999999997 78999999999999999988
Q ss_pred eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccc-------ccccCccEEEEEEccCCC
Q 022184 237 IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK-------RLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 237 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-------~~~~~~~v~~~~~spdg~ 301 (301)
+..+.. ...+.+++|+|++.+|++++.+ .+++|++........+. ..| ...+.+++|+|||+
T Consensus 231 ~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~spdg~ 299 (319)
T 3frx_A 231 MYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAA-EPHAVSLAWSADGQ 299 (319)
T ss_dssp EEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGG-CCCEEEEEECTTSS
T ss_pred EEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCc-CcceeEEEECCCCC
Confidence 877764 4689999999999999988765 59999998876554432 234 56799999999985
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=279.65 Aligned_cols=249 Identities=14% Similarity=0.100 Sum_probs=200.6
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..+|++++|+++ . .+++|+ .++.|++|+++...... .....+.+|.+.|++++|+|+|++|++++.
T Consensus 82 ~~~v~~~~~s~d---~-~l~~~s------~dg~v~lWd~~~~~~~~----~~~~~~~~H~~~V~~v~~spdg~~l~sgs~ 147 (344)
T 4gqb_B 82 EAGVADLTWVGE---R-GILVAS------DSGAVELWELDENETLI----VSKFCKYEHDDIVSTVSVLSSGTQAVSGSK 147 (344)
T ss_dssp SSCEEEEEEETT---T-EEEEEE------TTSEEEEEEECTTSSCE----EEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEEeCC---C-eEEEEE------CCCEEEEEeccCCCcee----EeeccccCCCCCEEEEEECCCCCEEEEEeC
Confidence 357999999977 3 455544 67888999997654322 113345689999999999999999999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCC-CEEEEeecCCeEEEEeCCCcceeccccc--CCccEEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDG-SRFAAGGVDGHLRIMHWPSLRIILDEPK--AHKSVLDM 160 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~ 160 (301)
|++|++||+++++....+ ..|...|.+++|+|++ .+|++++.|+.|++||+++++....+.. +...+.++
T Consensus 148 d~~i~iwd~~~~~~~~~~-------~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 220 (344)
T 4gqb_B 148 DICIKVWDLAQQVVLSSY-------RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSL 220 (344)
T ss_dssp TSCEEEEETTTTEEEEEE-------CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEE
T ss_pred CCeEEEEECCCCcEEEEE-------cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceee
Confidence 999999999887653222 2477899999999987 4789999999999999999887766543 33478999
Q ss_pred EecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeee
Q 022184 161 DFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239 (301)
Q Consensus 161 ~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 239 (301)
+|+|+ +++|++++.|+.|++||+++++++..+..|. ..|++++|+|++..+ +++++.|++|++||+++++.. .
T Consensus 221 ~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~fsp~g~~~----lasgs~D~~i~vwd~~~~~~~-~ 294 (344)
T 4gqb_B 221 AWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS-QCVTGLVFSPHSVPF----LASLSEDCSLAVLDSSLSELF-R 294 (344)
T ss_dssp EECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS-SCEEEEEECSSSSCC----EEEEETTSCEEEECTTCCEEE-E
T ss_pred eecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC-CCEEEEEEccCCCeE----EEEEeCCCeEEEEECCCCcEE-E
Confidence 99995 5688999999999999999999999888765 469999999998642 688999999999999998765 5
Q ss_pred eeccCCCcEEEEEcCCCC-EEEEeeCCCcEEEEeCCCceee
Q 022184 240 KRLLRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKMEIN 279 (301)
Q Consensus 240 ~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~ 279 (301)
+.+|...|++++|+|+++ +|++++.|++|++|++.+....
T Consensus 295 ~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 295 SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC----
T ss_pred EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCC
Confidence 678999999999999986 5778999999999999876543
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6e-42 Score=297.86 Aligned_cols=276 Identities=17% Similarity=0.257 Sum_probs=218.7
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+. ...+++|+ .|+.+++|+..+. . ....+.+|.+.|.+++|+|+|++|++++
T Consensus 146 h~~~v~~v~f~p~~--~~~l~s~s------~D~~v~lwd~~~~--~------~~~~l~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 146 QARAMNSVDFKPSR--PFRIISGS------DDNTVAIFEGPPF--K------FKSTFGEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp CSSCEEEEEECSSS--SCEEEEEE------TTSCEEEEETTTB--E------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCceEEEECCCC--CeEEEEEe------CCCeEEEEECCCC--e------EeeeeccccCceEEEEECCCCCEEEEEE
Confidence 35689999999772 23566655 6788899986432 1 2345789999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceec--------------
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL-------------- 148 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~-------------- 148 (301)
.|++|++||+.+++....+.........|.+.|.+++|+|++++|++++.|++|++||+++++.+.
T Consensus 210 ~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~ 289 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG 289 (611)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEE
T ss_pred CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEE
Confidence 999999999887765333221112233588999999999999999999999999999998765432
Q ss_pred -----------------------------ccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee-----
Q 022184 149 -----------------------------DEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR----- 194 (301)
Q Consensus 149 -----------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----- 194 (301)
.+.+|...|.+++|+|++++|++++.|++|++||+.+++....+..
T Consensus 290 ~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~ 369 (611)
T 1nr0_A 290 IIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATM 369 (611)
T ss_dssp EEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSC
T ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcce
Confidence 2235777899999999999999999999999999987654322100
Q ss_pred ----------------------------------------------------------------------------cCCC
Q 022184 195 ----------------------------------------------------------------------------NSDE 198 (301)
Q Consensus 195 ----------------------------------------------------------------------------~~~~ 198 (301)
.+..
T Consensus 370 v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~ 449 (611)
T 1nr0_A 370 ITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISY 449 (611)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSS
T ss_pred EEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCC
Confidence 0112
Q ss_pred CeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE--eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC-
Q 022184 199 KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK- 275 (301)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~- 275 (301)
.+.+++|+|+|+. +++++.|+.|++||+.+++. ... ..|...|++++|+|||++|++++.|+.|++|++.+
T Consensus 450 ~v~~va~spdg~~-----lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~ 523 (611)
T 1nr0_A 450 NSSCVALSNDKQF-----VAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN 523 (611)
T ss_dssp CEEEEEECTTSCE-----EEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT
T ss_pred CceEEEEeCCCCE-----EEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC
Confidence 3678899999987 78999999999999987653 233 67889999999999999999999999999999987
Q ss_pred ceeecc-ccccccCccEEEEEEccCCC
Q 022184 276 MEINHW-SKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 276 ~~~~~~-~~~~~~~~~v~~~~~spdg~ 301 (301)
++.... ....| ...|.+++|+|||+
T Consensus 524 ~~~~~~~~~~~H-~~~V~~v~fspdg~ 549 (611)
T 1nr0_A 524 FELAHTNSWTFH-TAKVACVSWSPDNV 549 (611)
T ss_dssp TEESCCCCCCCC-SSCEEEEEECTTSS
T ss_pred Cceeeeeeeeec-ccceeEEEECCCCC
Confidence 666554 23458 89999999999985
No 17
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-42 Score=276.21 Aligned_cols=242 Identities=17% Similarity=0.224 Sum_probs=212.6
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|.+++|+++ ..++++|+ .|+.+++|++.... ....+..|...+.+++|+|++++|++++
T Consensus 79 h~~~v~~~~~~~~---~~~l~s~s------~D~~i~lWd~~~~~--------~~~~~~~~~~~~~~~~~spdg~~l~~g~ 141 (321)
T 3ow8_A 79 HQLGVVSVDISHT---LPIAASSS------LDAHIRLWDLENGK--------QIKSIDAGPVDAWTLAFSPDSQYLATGT 141 (321)
T ss_dssp CSSCEEEEEECSS---SSEEEEEE------TTSEEEEEETTTTE--------EEEEEECCTTCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEECCC---CCEEEEEe------CCCcEEEEECCCCC--------EEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 3567999999987 56777755 67888999876432 1234667888999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++|+++.++....+. .+...+.+++|+|++++|++++.|+.|++||+++++.+..+..|..+|.+++|
T Consensus 142 ~dg~v~i~~~~~~~~~~~~~-------~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 214 (321)
T 3ow8_A 142 HVGKVNIFGVESGKKEYSLD-------TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 214 (321)
T ss_dssp TTSEEEEEETTTCSEEEEEE-------CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEE
T ss_pred CCCcEEEEEcCCCceeEEec-------CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEE
Confidence 99999999998776532221 24567999999999999999999999999999999988888888899999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
+|++++|++++.|+.|++||+++++....+..|. ..|.+++|+|++.+ +++++.|+.|++||+++++++..+..
T Consensus 215 spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~sp~~~~-----l~s~s~D~~v~iwd~~~~~~~~~~~~ 288 (321)
T 3ow8_A 215 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA-SWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTRTCVHTFFD 288 (321)
T ss_dssp CTTSCEEEEECTTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred cCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCC-CceEEEEECCCCCE-----EEEEeCCCcEEEEeCCCCEEEEEEcC
Confidence 9999999999999999999999999888887654 46999999999997 78999999999999999999999999
Q ss_pred cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCC
Q 022184 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~ 274 (301)
|...|.+++|+|++++|++++.|+.|++||..
T Consensus 289 h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 289 HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999999974
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.6e-42 Score=272.33 Aligned_cols=232 Identities=12% Similarity=0.125 Sum_probs=200.7
Q ss_pred eccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCe
Q 022184 56 TYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (301)
Q Consensus 56 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (301)
...+.+|.+.|.+++|+|++++|++++.||+|++||++++.....+ ..|..+|.+++|+|++++|++|+.|+.
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~s~d~~ 78 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI-------QVTETPVRAGKFIARKNWIIVGSDDFR 78 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------ECCSSCEEEEEEEGGGTEEEEEETTSE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe-------eccCCcEEEEEEeCCCCEEEEECCCCE
Confidence 4468899999999999999999999999999999999877642222 135678999999999999999999999
Q ss_pred EEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccC-CCcceE
Q 022184 136 LRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKD-GTKPFL 214 (301)
Q Consensus 136 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~ 214 (301)
|++||+++++.+..+..|...|.+++|+|++++|++++.|++|++||++++.........+...|.+++|+|+ +..
T Consensus 79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~--- 155 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST--- 155 (304)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE---
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE---
Confidence 9999999999988899999999999999999999999999999999999885554433345567999999994 555
Q ss_pred EEEEEeCCcceEEEEEccCceEeeeee-ccCCCcEEEEEcC--CCCEEEEeeCCCcEEEEeCCCceeeccccccccCccE
Q 022184 215 FCTVQRGDKALLAVYDISTWNKIGHKR-LLRKPASVLSISL--DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSI 291 (301)
Q Consensus 215 ~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v 291 (301)
+++++.|+.|++||+++......+. .+...+..+.|+| ++++|++++.|+.|++||+++++.+..+ .+| ...|
T Consensus 156 --l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~-~~h-~~~v 231 (304)
T 2ynn_A 156 --FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL-EGH-MSNV 231 (304)
T ss_dssp --EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE-ECC-SSCE
T ss_pred --EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee-CCC-CCCE
Confidence 7899999999999998776654443 4557889999987 7789999999999999999999988877 678 8999
Q ss_pred EEEEEccCCC
Q 022184 292 ALVEFCPTQR 301 (301)
Q Consensus 292 ~~~~~spdg~ 301 (301)
.+++|+|+++
T Consensus 232 ~~~~~~p~~~ 241 (304)
T 2ynn_A 232 SFAVFHPTLP 241 (304)
T ss_dssp EEEEECSSSS
T ss_pred EEEEECCCCC
Confidence 9999999974
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2e-41 Score=281.02 Aligned_cols=231 Identities=17% Similarity=0.234 Sum_probs=210.6
Q ss_pred eccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCe
Q 022184 56 TYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (301)
Q Consensus 56 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (301)
...+.+|.++|++++|+|++++|++++.|++|++||+.+++....+ ..|...|.+++|+|++++|++|+.|+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l-------~~h~~~V~~v~~~~~~~~l~sgs~D~~ 173 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-------KGHTDSVQDISFDHSGKLLASCSADMT 173 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE-------CCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------eccCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 4567899999999999999999999999999999999887653222 237789999999999999999999999
Q ss_pred EEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 136 LRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 136 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++.++..+..|. ..+.++.|+|++..
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~g~~---- 248 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-EWVRMVRPNQDGTL---- 248 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSE----
T ss_pred EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC-ccEEEEEECCCCCE----
Confidence 9999999999888888999999999999999999999999999999999999998888664 46999999999997
Q ss_pred EEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCC--------------------CCEEEEeeCCCcEEEEeCCC
Q 022184 216 CTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLD--------------------GKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~--------------------~~~l~~~~~d~~i~i~~~~~ 275 (301)
+++++.|+.|++||+++++....+..|...|.+++|+|+ +.+|++|+.|+.|++||+++
T Consensus 249 -l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 249 -IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp -EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred -EEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 789999999999999999988888999999999999996 67899999999999999999
Q ss_pred ceeeccccccccCccEEEEEEccCCC
Q 022184 276 MEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 276 ~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++.+..+ .+| ...|++++|+|+|+
T Consensus 328 ~~~~~~~-~~h-~~~v~~v~~~~~g~ 351 (410)
T 1vyh_C 328 GMCLMTL-VGH-DNWVRGVLFHSGGK 351 (410)
T ss_dssp TEEEEEE-ECC-SSCEEEEEECSSSS
T ss_pred CceEEEE-ECC-CCcEEEEEEcCCCC
Confidence 9988877 578 89999999999985
No 20
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.7e-41 Score=277.42 Aligned_cols=272 Identities=15% Similarity=0.172 Sum_probs=216.3
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCc----------eeccccccCCcceEEEEC
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPL----------VTYVFDESEGDPMTIAVN 72 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----------~~~~~~~h~~~v~~~~~~ 72 (301)
...+|+|++|+|+ +.++|+|. ++.+++|++............ .......+...|.+++|+
T Consensus 63 h~~~V~~v~fspd---g~~la~g~-------~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s 132 (393)
T 1erj_A 63 HTSVVCCVKFSND---GEYLATGC-------NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS 132 (393)
T ss_dssp CSSCCCEEEECTT---SSEEEEEC-------BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC
T ss_pred CCCEEEEEEECCC---CCEEEEEc-------CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEEC
Confidence 4678999999988 67888743 356789887543321100000 000111233459999999
Q ss_pred CCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccccc
Q 022184 73 PSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK 152 (301)
Q Consensus 73 ~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 152 (301)
|++++|++++.|+.|++||+++++.... ...|...|.+++|+|++++|++++.|+.|++||+++++....+ .
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~-------~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~ 204 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMI-------LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL-S 204 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-E
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEE-------EccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE-E
Confidence 9999999999999999999987754222 1247789999999999999999999999999999998876555 3
Q ss_pred CCccEEEEEecC-CCcEEEEEeCCCcEEEEeCCCCceEEEEe------ecCCCCeeEEEEccCCCcceEEEEEEeCCcce
Q 022184 153 AHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFLT------RNSDEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (301)
Q Consensus 153 ~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (301)
+...+.+++|+| ++++|++++.|+.|++||+++++.+..+. ..+...|.+++|+|+++. +++++.|+.
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-----l~s~s~d~~ 279 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-----VVSGSLDRS 279 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE-----EEEEETTSE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE-----EEEEeCCCE
Confidence 567899999999 89999999999999999999998877663 234557999999999997 789999999
Q ss_pred EEEEEccCce------------EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEE
Q 022184 226 LAVYDISTWN------------KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL 293 (301)
Q Consensus 226 i~~~d~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~ 293 (301)
|++||+++.. ....+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+ .+| ...|.+
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l-~~h-~~~v~~ 357 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML-QGH-RNSVIS 357 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE-ECC-SSCEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE-CCC-CCCEEE
Confidence 9999997632 34456778889999999999999999999999999999999988776 678 899999
Q ss_pred EEEccC
Q 022184 294 VEFCPT 299 (301)
Q Consensus 294 ~~~spd 299 (301)
++|+|+
T Consensus 358 v~~~~~ 363 (393)
T 1erj_A 358 VAVANG 363 (393)
T ss_dssp EEECSS
T ss_pred EEecCC
Confidence 999873
No 21
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-41 Score=273.64 Aligned_cols=243 Identities=17% Similarity=0.181 Sum_probs=210.4
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
...|.+++|+|+ +.++++|+ .++.+++|++...... ......+.+|.+.|.++.|++++. +++++.
T Consensus 97 ~~~v~~~~~s~~---~~~l~s~~------~d~~v~iw~~~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~ 162 (340)
T 1got_B 97 SSWVMTCAYAPS---GNYVACGG------LDNICSIYNLKTREGN----VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG 162 (340)
T ss_dssp SSCEEEEEECTT---SSEEEEEE------TTCEEEEEETTTCSBS----CEEEEEEECCSSCEEEEEEEETTE-EEEEET
T ss_pred CccEEEEEECCC---CCEEEEEe------CCCeEEEEECccCCCc----ceeEEEecCCCccEEEEEECCCCc-EEEEEC
Confidence 467999999987 67888866 6778899998754321 122445789999999999998775 889999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEec
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 163 (301)
|++|++||+++++....+ ..|...|.+++|+|++++|++|+.|+.|++||+++++....+..|...|.+++|+
T Consensus 163 d~~i~~wd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 163 DTTCALWDIETGQQTTTF-------TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235 (340)
T ss_dssp TSCEEEEETTTTEEEEEE-------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred CCcEEEEECCCCcEEEEE-------cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc
Confidence 999999999887653222 2477899999999999999999999999999999999888888899999999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCceEEEEeec-CCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRN-SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 164 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
|++++|++++.|+.|++||+++++.+..+... ....+.+++|+|+++. +++++.|+.|++||+.+++.+..+.+
T Consensus 236 p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-----l~~g~~d~~i~vwd~~~~~~~~~~~~ 310 (340)
T 1got_B 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL-----LLAGYDDFNCNVWDALKADRAGVLAG 310 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCE-----EEEECCCCeEEEEEcccCcEeeEeec
Confidence 99999999999999999999998887776532 2236999999999997 78899999999999999999889999
Q ss_pred cCCCcEEEEEcCCCCEEEEeeCCCcEEEEe
Q 022184 243 LRKPASVLSISLDGKYLAMGSKDGDICVVD 272 (301)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~ 272 (301)
|...|.+++|+|++++|++|+.|+.|+|||
T Consensus 311 h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999997
No 22
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-40 Score=269.72 Aligned_cols=274 Identities=11% Similarity=0.133 Sum_probs=211.9
Q ss_pred CCceeEEEee-----eecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCe
Q 022184 3 GGGTVTCGSW-----IKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDD 77 (301)
Q Consensus 3 ~~~~v~~~~w-----~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 77 (301)
...+|++++| ++ .+..++++|+ .|+.+++|++....... ........+.+|...|.+++|+|++.+
T Consensus 20 H~~~V~~~~~~~s~~~~--~d~~~l~sgs------~D~~v~iWd~~~~~~~~-~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKEN--EDSPVLISGS------RDKTVMIWKLYEEEQNG-YFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp CSSCEEEEEECCCSSTT--CCCCEEEEEE------TTSCEEEEEECSSCCSS-BSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred chhhhhheeeEEEeecC--CCCCEEEEEc------CCCEEEEEECCcCCccc-ccccccchhccCCCceEEEEECCCCCE
Confidence 4578999999 43 1267888866 67888999986543110 011223467899999999999999999
Q ss_pred EEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceec--ccccCCc
Q 022184 78 FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL--DEPKAHK 155 (301)
Q Consensus 78 l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~~~~~ 155 (301)
+++++.|++|++||+++++....+ ..|...|.+++|+|++++|++++.|+.|++||+....... ....|..
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~-------~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRF-------VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD 163 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEE-------ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSS
T ss_pred EEEEcCCCcEEEEECCCCcEEEEE-------cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCc
Confidence 999999999999999887653222 2477899999999999999999999999999997433221 1225667
Q ss_pred cEEEEEecCCC----------cEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcce
Q 022184 156 SVLDMDFSLDS----------EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (301)
Q Consensus 156 ~i~~~~~~~~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (301)
.|.+++|+|++ .+|++++.|+.|++||. ..+....+..| ...|.+++|+|++++ +++++.|+.
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h-~~~v~~~~~s~~g~~-----l~sgs~dg~ 236 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAH-ESNVNHLSISPNGKY-----IATGGKDKK 236 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECC-SSCEEEEEECTTSSE-----EEEEETTCE
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCc-cccceEEEECCCCCE-----EEEEcCCCe
Confidence 89999999987 78999999999999994 45556666654 457999999999997 789999999
Q ss_pred EEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeec--ccc----------ccccCccEEE
Q 022184 226 LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH--WSK----------RLHLGTSIAL 293 (301)
Q Consensus 226 i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~--~~~----------~~~~~~~v~~ 293 (301)
|++||+...........+...|.+++|+|++++++++ .|+.|++|++.+++... .+. .+| ...|.+
T Consensus 237 v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~ 314 (343)
T 2xzm_R 237 LLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGK-NPQCTS 314 (343)
T ss_dssp EEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCS-CCCEEE
T ss_pred EEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCC-CCceEE
Confidence 9999995443322233355679999999999887755 57889999998765433 221 256 778999
Q ss_pred EEEccCCC
Q 022184 294 VEFCPTQR 301 (301)
Q Consensus 294 ~~~spdg~ 301 (301)
++|+|+|+
T Consensus 315 ~~~sp~g~ 322 (343)
T 2xzm_R 315 LAWNALGK 322 (343)
T ss_dssp EEECSSSC
T ss_pred EEECCCCC
Confidence 99999985
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.3e-40 Score=269.48 Aligned_cols=246 Identities=15% Similarity=0.165 Sum_probs=210.4
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
...|.+++|+|+ +.++++|+ .++.+++|.+....... .......+.+|.+.|.+++|+|+++.|++++.
T Consensus 106 ~~~v~~~~~sp~---g~~lasg~------~d~~i~v~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~ 174 (354)
T 2pbi_B 106 CTWVMACAYAPS---GCAIACGG------LDNKCSVYPLTFDKNEN--MAAKKKSVAMHTNYLSACSFTNSDMQILTASG 174 (354)
T ss_dssp SSCCCEEEECTT---SSEEEEES------TTSEEEEEECCCCTTCC--SGGGCEEEEECSSCEEEEEECSSSSEEEEEET
T ss_pred CCCEEEEEECCC---CCEEEEee------CCCCEEEEEEecccccc--ccccceeeeccCCcEEEEEEeCCCCEEEEEeC
Confidence 456889999988 67888876 67788999886543211 11223456789999999999999999999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee--CCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMD 161 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~ 161 (301)
|++|++||+++++....+ ..|...|.+++|+| ++++|++|+.||.|++||+++++.+..+..|...|.+++
T Consensus 175 D~~v~lwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~ 247 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSF-------HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVR 247 (354)
T ss_dssp TSEEEEEETTTCCEEEEE-------ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred CCcEEEEeCCCCeEEEEE-------cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEE
Confidence 999999999887653222 23678899999988 578999999999999999999998888888999999999
Q ss_pred ecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecC-CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeee
Q 022184 162 FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS-DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK 240 (301)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 240 (301)
|+|++++|++++.|++|++||++.++.+..+..+. ...+.+++|+|++.. +++++.|+.|++||+.+++.+..+
T Consensus 248 ~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~-----l~~g~~d~~i~vwd~~~~~~~~~l 322 (354)
T 2pbi_B 248 YYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL-----LFAGYNDYTINVWDVLKGSRVSIL 322 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE-----EEEEETTSCEEEEETTTCSEEEEE
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE-----EEEEECCCcEEEEECCCCceEEEE
Confidence 99999999999999999999999988777665332 235889999999997 788999999999999999988888
Q ss_pred eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEe
Q 022184 241 RLLRKPASVLSISLDGKYLAMGSKDGDICVVD 272 (301)
Q Consensus 241 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~ 272 (301)
..|...|++++|+|++++|++|+.|+.|++|+
T Consensus 323 ~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 323 FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999999996
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.2e-40 Score=286.57 Aligned_cols=261 Identities=16% Similarity=0.227 Sum_probs=221.2
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+ +.++++++ .++.+++|+.+... ...+.+|...|.+++|+|++++|++++
T Consensus 302 h~~~v~~~~~~~~---~~~l~t~~------~d~~i~~w~~~~~~---------~~~~~~~~~~v~~~~~s~~g~~l~~~~ 363 (577)
T 2ymu_A 302 HSSSVWGVAFSPD---GQTIASAS------DDKTVKLWNRNGQH---------LQTLTGHSSSVWGVAFSPDGQTIASAS 363 (577)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSCEEEEETTSCE---------EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCeEEEEECCC---CCEEEEEe------CCCeEEEEeCCCCe---------eEEEeCCCCCEEEEEECCCCCEEEEEe
Confidence 3578999999987 56777755 56778999865332 234678999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++|+... +.... ...|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|++++|
T Consensus 364 ~dg~v~~~~~~~-~~~~~-------~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 364 DDKTVKLWNRNG-QLLQT-------LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp TTSEEEEEETTC-CEEEE-------EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEE
T ss_pred CCCEEEEEcCCC-CEEEE-------ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEE
Confidence 999999999543 22111 1236788999999999999999999999999995 56667778888899999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
+|++++|++++.|+.|++||. +++.+..+..+ ...+.+++|+|+++. +++++.|+.|++||. +++.+..+..
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~-~~~v~~~~~spd~~~-----las~~~d~~i~iw~~-~~~~~~~~~~ 506 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNR-NGQLLQTLTGH-SSSVRGVAFSPDGQT-----IASASDDKTVKLWNR-NGQLLQTLTG 506 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEET-TSCEEEEEECC-SSCEEEEEECTTSCE-----EEEEETTSEEEEEET-TSCEEEEEEC
T ss_pred CCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCC-CCCEEEEEEcCCCCE-----EEEEeCCCEEEEEcC-CCCEEEEEeC
Confidence 999999999999999999996 56667777655 457999999999997 788999999999995 5677888999
Q ss_pred cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
|...|++++|+|++++|++++.|+.|++||. +++.+..+ .+| ...|++++|+|||+
T Consensus 507 h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~-~~h-~~~v~~~~fs~dg~ 562 (577)
T 2ymu_A 507 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL-TGH-SSSVWGVAFSPDGQ 562 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE-ECC-SSCEEEEEECTTSS
T ss_pred CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEE-cCC-CCCEEEEEEcCCCC
Confidence 9999999999999999999999999999996 56666665 689 99999999999985
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-39 Score=262.46 Aligned_cols=270 Identities=13% Similarity=0.119 Sum_probs=225.9
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+ +.++++++ ++.+++|+++..... .........+|...|.+++|+|++++|++++
T Consensus 50 h~~~v~~~~~~~~---~~~l~~~~-------dg~i~iw~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 116 (337)
T 1gxr_A 50 HGEVVCAVTISNP---TRHVYTGG-------KGCVKVWDISHPGNK---SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG 116 (337)
T ss_dssp CSSCCCEEEECSS---SSEEEEEC-------BSEEEEEETTSTTCC---SCSEEEECSCTTSBEEEEEECTTSSEEEEEE
T ss_pred CCCceEEEEEecC---CcEEEEcC-------CCeEEEEECCCCCce---eeeecccccCCCCcEEEEEEcCCCCEEEEEc
Confidence 4678999999987 56777643 567899998764421 1112222347899999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++||+.+++..... ....|...+.+++|+|++++|++++.|+.|++||+++++....+..|...+.+++|
T Consensus 117 ~d~~i~~~d~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 117 EASTLSIWDLAAPTPRIKA-----ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 191 (337)
T ss_dssp SSSEEEEEECCCC--EEEE-----EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCCcEEEEECCCCCcceee-----ecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEE
Confidence 9999999999876532111 11236678999999999999999999999999999999888888888899999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
+|++++|++++.|+.|++||+++++.+..+. +...+.+++|+|+++. +++++.++.|++||+++.+.. .+..
T Consensus 192 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~-----l~~~~~~~~i~~~~~~~~~~~-~~~~ 263 (337)
T 1gxr_A 192 SNDGTKLWTGGLDNTVRSWDLREGRQLQQHD--FTSQIFSLGYCPTGEW-----LAVGMESSNVEVLHVNKPDKY-QLHL 263 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECTTSSE-----EEEEETTSCEEEEETTSSCEE-EECC
T ss_pred CCCCCEEEEEecCCcEEEEECCCCceEeeec--CCCceEEEEECCCCCE-----EEEEcCCCcEEEEECCCCCeE-EEcC
Confidence 9999999999999999999999998887775 3456999999999997 678889999999999987764 5677
Q ss_pred cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
|...+.+++|+|++++|++++.||.|++||+.+++.+.. ..| ...|.+++|+|||+
T Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~--~~~-~~~v~~~~~s~~~~ 319 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ--SKE-SSSVLSCDISVDDK 319 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--EEC-SSCEEEEEECTTSC
T ss_pred CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE--ecC-CCcEEEEEECCCCC
Confidence 889999999999999999999999999999999887754 346 78999999999985
No 26
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-42 Score=289.30 Aligned_cols=287 Identities=13% Similarity=0.137 Sum_probs=213.7
Q ss_pred CCceeEEEeeeecCCC------ccEEEecCCcc-------------ccCCcCceeEeeeCCCcceeeeCCceeccccccC
Q 022184 3 GGGTVTCGSWIKRPEN------VNLVVLGKSSR-------------ASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESE 63 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~------~~~~~~g~~~~-------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~ 63 (301)
.+++|+|++|+|++.. ..++|+|.... ..+.|+.++||+++...... .....+.+|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~----~~~~~l~~~~ 207 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHC----VKVQTIVHSF 207 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCE----EEEEEEEECC
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCc----eEEEEEEecC
Confidence 4689999999998622 27888876431 13578899999987644211 1123456788
Q ss_pred CcceEEEECCC------CCeEEEEecCCcEEEEEEcCCccccc----cccccCCCCCCCCCeeEEEEeeCCCEEEEeecC
Q 022184 64 GDPMTIAVNPS------GDDFVCSTTNGGCKLFEVYGGATDIN----LLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (301)
Q Consensus 64 ~~v~~~~~~~~------~~~l~~~~~d~~i~~w~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (301)
+.|.+++|+|+ +.+||+++.||+|++||+..+..... ..........|...|.+++|+|++ .|++|+.|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~D 286 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKN 286 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETT
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCC
Confidence 99999999996 57999999999999999986643210 000000112467899999999864 89999999
Q ss_pred CeEEEEeCCCcce-ecccccCCccEEEE--EecCCC-cEEEEEeCCCcEEEEeCCCCceEEEEeecCC-CCeeEEEEccC
Q 022184 134 GHLRIMHWPSLRI-ILDEPKAHKSVLDM--DFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLTRNSD-EKIELCRFSKD 208 (301)
Q Consensus 134 g~i~v~d~~~~~~-~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~ 208 (301)
|+|++||+++++. ...+..|...|.++ +|+|++ .+|++++.|++|+|||++++++...+..+.. ..+.+++|+|+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 9999999987643 34467888999999 578887 8999999999999999999887766665543 24789999999
Q ss_pred CCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccc---c
Q 022184 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR---L 285 (301)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---~ 285 (301)
+.. +++++.|+.|++||++++..+..+.+|...|++++|+|++++|++|+.|++|++||+... .+..... .
T Consensus 367 ~~~-----l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~ 440 (524)
T 2j04_B 367 IYS-----YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSAT 440 (524)
T ss_dssp TTE-----EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------
T ss_pred cCe-----EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccc
Confidence 986 688889999999999998887778889999999999999999999999999999998653 2111100 0
Q ss_pred ccCccEEEEEEccCC
Q 022184 286 HLGTSIALVEFCPTQ 300 (301)
Q Consensus 286 ~~~~~v~~~~~spdg 300 (301)
+....+.+++|+|+|
T Consensus 441 ~~~~~v~~v~~sp~g 455 (524)
T 2j04_B 441 QKSLRLWKWDYSIKD 455 (524)
T ss_dssp CCCCEEEECBCCSSS
T ss_pred eeeeEEEEeccCCCC
Confidence 102245677777766
No 27
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.6e-40 Score=264.68 Aligned_cols=239 Identities=12% Similarity=0.176 Sum_probs=200.7
Q ss_pred eccccccCCcceEEEECCCC-CeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC
Q 022184 56 TYVFDESEGDPMTIAVNPSG-DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG 134 (301)
Q Consensus 56 ~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 134 (301)
...+.+|.+.|.+++|+|++ ++|++++.|++|++|++........... .....|...|.+++|+|++++|++++.|+
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~--~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPV--RSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEE--EEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccc--eEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 45688999999999999965 7999999999999999975432111110 11224778999999999999999999999
Q ss_pred eEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcc-e
Q 022184 135 HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKP-F 213 (301)
Q Consensus 135 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~ 213 (301)
+|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||++ ++.+..+..+ ...+.++.|+|..... -
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h-~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGH-NDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCC-SSCEEEEEECCC------
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEecc-CCcEEEEEEccCCCCCCC
Confidence 99999999999988898999999999999999999999999999999996 4556666655 4579999999964310 0
Q ss_pred EEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEE
Q 022184 214 LFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL 293 (301)
Q Consensus 214 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~ 293 (301)
-..+++++.|+.|++||+++.+....+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+. + ...|.+
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~-~~~v~~ 242 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS--A-QDEVFS 242 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--C-CSCEEE
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--C-CCcEEE
Confidence 0016889999999999999999888889999999999999999999999999999999999999887763 3 468999
Q ss_pred EEEccCCC
Q 022184 294 VEFCPTQR 301 (301)
Q Consensus 294 ~~~spdg~ 301 (301)
++|+|||+
T Consensus 243 ~~~sp~~~ 250 (319)
T 3frx_A 243 LAFSPNRY 250 (319)
T ss_dssp EEECSSSS
T ss_pred EEEcCCCC
Confidence 99999984
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=267.44 Aligned_cols=256 Identities=13% Similarity=0.106 Sum_probs=202.1
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+ ++++++|+ .|+.+++|+.+...... ...+.+|.+.|.+++|+|++++|++++
T Consensus 60 h~~~v~~~~~sp~---g~~l~s~s------~D~~v~iw~~~~~~~~~------~~~~~~h~~~v~~v~~sp~~~~l~s~s 124 (345)
T 3fm0_A 60 HQRTVRKVAWSPC---GNYLASAS------FDATTCIWKKNQDDFEC------VTTLEGHENEVKSVAWAPSGNLLATCS 124 (345)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSCEEEEEECCC-EEE------EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCcEEEEEECCC---CCEEEEEE------CCCcEEEEEccCCCeEE------EEEccCCCCCceEEEEeCCCCEEEEEE
Confidence 3568999999987 67888866 67788999987543222 345789999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc--eecccccCCccEEEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR--IILDEPKAHKSVLDM 160 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~ 160 (301)
.|++|++||+.......... ....|...|.+++|+|++++|++++.|+.|++||.++++ ....+.+|...|.++
T Consensus 125 ~D~~v~iwd~~~~~~~~~~~----~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l 200 (345)
T 3fm0_A 125 RDKSVWVWEVDEEDEYECVS----VLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSL 200 (345)
T ss_dssp TTSCEEEEEECTTSCEEEEE----EECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CCCeEEEEECCCCCCeEEEE----EecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEE
Confidence 99999999998654311111 112467889999999999999999999999999998765 345677888999999
Q ss_pred EecCCCcEEEEEeCCCcEEEEeCCCC---------------ceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcce
Q 022184 161 DFSLDSEFLATTSTDGSARIWKTEDG---------------VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (301)
Q Consensus 161 ~~~~~~~~l~~~~~d~~i~i~d~~~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (301)
+|+|++++|++++.|++|++||.... +++..+...+...|.+++|+|++.. +++++.|+.
T Consensus 201 ~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-----l~s~~~d~~ 275 (345)
T 3fm0_A 201 AFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA-----LATACGDDA 275 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCC-----EEEEETTSC
T ss_pred EECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCE-----EEEEeCCCe
Confidence 99999999999999999999996421 2344455545667999999999997 788999999
Q ss_pred EEEEEccCceE---------eeeeeccCCCcEEEEEcCCC-CEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 226 LAVYDISTWNK---------IGHKRLLRKPASVLSISLDG-KYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 226 i~~~d~~~~~~---------~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
|++|+...... ......|...|++++|+|++ .+|++++.||.|++|++.+.+.+...
T Consensus 276 i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 276 IRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 99999875421 12234678899999999987 59999999999999999988765543
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-40 Score=271.11 Aligned_cols=247 Identities=12% Similarity=0.109 Sum_probs=196.5
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
...|++++|+|+ ..+++. + .++.|++|++....... .......+|.+.|.+++|+|++++|++++.
T Consensus 94 ~~~V~~~~~s~d---~~~l~~-s------~dg~v~lWd~~~~~~~~----~~~~~~~~h~~~V~~v~~spdg~~l~sgs~ 159 (357)
T 4g56_B 94 EAGVTDVAWVSE---KGILVA-S------DSGAVELWEILEKESLL----VNKFAKYEHDDIVKTLSVFSDGTQAVSGGK 159 (357)
T ss_dssp SSCEEEEEEETT---TEEEEE-E------TTSCEEEC--------C----CCCEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred CCCEEEEEEcCC---CCEEEE-E------CCCEEEEeeccccceeE----EEeeccCCCCCCEEEEEECCCCCEEEEEeC
Confidence 456999999987 445443 2 56788999876543211 112345689999999999999999999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCC-EEEEeecCCeEEEEeCCCcceecccc--cCCccEEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGS-RFAAGGVDGHLRIMHWPSLRIILDEP--KAHKSVLDM 160 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~i~~~ 160 (301)
|+.|++||+++++....+ ..|...|.+++|+|++. ++++++.|+.|++||+++++....+. .+...+.++
T Consensus 160 dg~v~iwd~~~~~~~~~~-------~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v 232 (357)
T 4g56_B 160 DFSVKVWDLSQKAVLKSY-------NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSV 232 (357)
T ss_dssp TSCEEEEETTTTEEEEEE-------CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEE
T ss_pred CCeEEEEECCCCcEEEEE-------cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccch
Confidence 999999999887653222 23678999999999874 78999999999999999887765443 345679999
Q ss_pred EecCCC-cEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeee
Q 022184 161 DFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239 (301)
Q Consensus 161 ~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 239 (301)
+|+|++ .+|++++.|+.|++||+++++.+..+..+. ..|.+++|+|++..+ +++++.|++|++||+++++.+..
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~-~~v~~l~~sp~~~~~----lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS-QNITGLAYSYHSSPF----LASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS-SCEEEEEECSSSSCC----EEEEETTSCEEEECTTSCEEEEE
T ss_pred hhhhcccceEEEeecccceeEEECCCCcEeEEEeccc-eeEEEEEEcCCCCCE----EEEEeCCCEEEEEECCCCcEeEE
Confidence 999975 588999999999999999999988887654 469999999998642 67889999999999999887754
Q ss_pred eeccCCCcEEEEEcC-CCCEEEEeeCCCcEEEEeCCCce
Q 022184 240 KRLLRKPASVLSISL-DGKYLAMGSKDGDICVVDVKKME 277 (301)
Q Consensus 240 ~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~ 277 (301)
..|...|++++|+| ++++|++++.|++|++|++.+..
T Consensus 308 -~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 308 -LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp -CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred -CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 47899999999999 79999999999999999997643
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-39 Score=263.81 Aligned_cols=242 Identities=14% Similarity=0.144 Sum_probs=193.7
Q ss_pred eeccccccCCcceEEEE-----CC-CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEE
Q 022184 55 VTYVFDESEGDPMTIAV-----NP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA 128 (301)
Q Consensus 55 ~~~~~~~h~~~v~~~~~-----~~-~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 128 (301)
....+.+|.+.|++++| ++ ++++|++++.|++|++||+...+..............|...|.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 34568899999999999 76 8999999999999999999765432111111112234778999999999999999
Q ss_pred EeecCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEe--ecCCCCeeEEEEc
Q 022184 129 AGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT--RNSDEKIELCRFS 206 (301)
Q Consensus 129 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~ 206 (301)
+++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+... ...... ..+...+.+++|+
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEEC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeec
Confidence 9999999999999999988888899999999999999999999999999999999843 333322 1345579999999
Q ss_pred cCCCcce-----EEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCce-eec
Q 022184 207 KDGTKPF-----LFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME-INH 280 (301)
Q Consensus 207 ~~~~~~~-----~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~ 280 (301)
|++.... --.+++++.|+.|++||. ..+....+..|...|.+++|+|+|++|++++.|+.|++||+.... ...
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred cccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 9873100 001688999999999994 456667788899999999999999999999999999999995433 333
Q ss_pred cccccccCccEEEEEEccCCC
Q 022184 281 WSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 281 ~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+ .+ ...|.+++|+|+++
T Consensus 251 ~~--~~-~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 251 EF--DA-GSTINQIAFNPKLQ 268 (343)
T ss_dssp EE--EC-SSCEEEEEECSSSC
T ss_pred ee--cC-CCcEEEEEECCCCC
Confidence 32 23 56799999999974
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-39 Score=258.37 Aligned_cols=246 Identities=12% Similarity=0.109 Sum_probs=197.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCC--CCeEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS--GDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~ 80 (301)
...+|++++|+|+ +.++|+|+ .|+.+++|+++..... ....+.+|.++|.+++|+|+ +++|++
T Consensus 8 h~~~V~~~~~s~~---g~~las~s------~D~~v~iw~~~~~~~~------~~~~l~gH~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 8 HNEMIHDAVMDYY---GKRMATCS------SDKTIKIFEVEGETHK------LIDTLTGHEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSCEEEEEBCSSCBC------CCEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CcCceEEEEECCC---CCEEEEEe------CCCEEEEEecCCCCcE------EEEEEccccCCeEEEEecCCCcCCEEEE
Confidence 4678999999988 67888866 6788899998653321 23457899999999999864 889999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC--CCEEEEeecCCeEEEEeCCCcce--ecccccCCcc
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRI--ILDEPKAHKS 156 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~ 156 (301)
++.|++|++||+++++..... ....|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+..|...
T Consensus 73 ~s~D~~v~iWd~~~~~~~~~~-----~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~ 147 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGRWSQIA-----VHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (297)
T ss_dssp EETTTEEEEEEBSSSCBCCCE-----EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC
T ss_pred EcCCCEEEEEEcCCCceEEEE-----EeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc
Confidence 999999999999876421110 11236788999999997 89999999999999999987632 2345677889
Q ss_pred EEEEEecCC-------------CcEEEEEeCCCcEEEEeCCCCc----eEEEEeecCCCCeeEEEEccCC---CcceEEE
Q 022184 157 VLDMDFSLD-------------SEFLATTSTDGSARIWKTEDGV----AWTFLTRNSDEKIELCRFSKDG---TKPFLFC 216 (301)
Q Consensus 157 i~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~ 216 (301)
|.+++|+|+ +++|++++.|++|++||+++++ ....+..| ...|.+++|+|++ .+
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H-~~~V~~v~~sp~~~~~~~----- 221 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSY----- 221 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEE-----
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC-CCceEEEEECCCCCCceE-----
Confidence 999999997 5799999999999999998766 44455544 5579999999996 44
Q ss_pred EEEeCCcceEEEEEccCce---Eeeee--eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCC
Q 022184 217 TVQRGDKALLAVYDISTWN---KIGHK--RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 217 ~~~~~~~~~i~~~d~~~~~---~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~ 274 (301)
+++++.|+.|++||+++.. ....+ ..+...+.+++|+|++++|++++.|+.|++|+..
T Consensus 222 las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 222 MASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 6889999999999997642 11122 4567889999999999999999999999999986
No 32
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.6e-39 Score=268.61 Aligned_cols=276 Identities=14% Similarity=0.102 Sum_probs=224.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCC----C---
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS----G--- 75 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~--- 75 (301)
...+|+|++|+| .++++|+ .++.+++|+++...... .......+.+|...|.+++|+|+ +
T Consensus 15 h~~~i~~~~~~~-----~~l~s~~------~dg~i~iw~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~ 81 (397)
T 1sq9_A 15 HDADIFSVSACN-----SFTVSCS------GDGYLKVWDNKLLDNEN--PKDKSYSHFVHKSGLHHVDVLQAIERDAFEL 81 (397)
T ss_dssp SSSCEEEEEECS-----SEEEEEE------TTSEEEEEESBCCTTCC--GGGGEEEEECCTTCEEEEEEEEEEETTTEEE
T ss_pred hhcCeEEEEecC-----CeEEEEc------CCCEEEEEECCCccccc--CCCcceEEecCCCcEEEEEEecccccCCccc
Confidence 467999999986 3777765 67788999987654211 11223456789999999999999 9
Q ss_pred CeEEEEecCCcEEEEEEcCCccccccccccCCCCCC-----CCCeeEEEEe----eCCCE-EEEeecCCeEEEEeCCC--
Q 022184 76 DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQD-----AGPQKCLSFS----VDGSR-FAAGGVDGHLRIMHWPS-- 143 (301)
Q Consensus 76 ~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s----~~~~~-l~~~~~dg~i~v~d~~~-- 143 (301)
++|++++.|+.|++|++.+++........... .| ...|.+++|+ |++++ |++++.||.|++||+++
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 159 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLD--LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 159 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEEC--CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeec--ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccc
Confidence 99999999999999999887642111111111 23 4889999999 99999 99999999999999988
Q ss_pred ----cceec-----cc-------ccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee---cC--CCCeeE
Q 022184 144 ----LRIIL-----DE-------PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR---NS--DEKIEL 202 (301)
Q Consensus 144 ----~~~~~-----~~-------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~--~~~v~~ 202 (301)
++.+. .+ ..+...|.+++|+|++ +|++++.|+.|++||+++++.+..+.. +. ...+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 160 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred cccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccce
Confidence 66655 55 3366789999999999 999999999999999999998888876 40 457999
Q ss_pred EEEccCCCcceEEEEEEeCCc---ceEEEEEccCceEeeeeec-------------cCCCcEEEEEcCCCCEEEEeeCCC
Q 022184 203 CRFSKDGTKPFLFCTVQRGDK---ALLAVYDISTWNKIGHKRL-------------LRKPASVLSISLDGKYLAMGSKDG 266 (301)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~~d~ 266 (301)
++|+|+++. +++++.| +.|++||+++++.+..+.. |...|.+++|+|++++|++++.|+
T Consensus 239 i~~~~~~~~-----l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 239 VKFSPQGSL-----LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp EEECSSTTE-----EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred EEECCCCCE-----EEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence 999999997 6788888 9999999999998888888 899999999999999999999999
Q ss_pred cEEEEeCCCceeecccc------cc--------------ccCccEEEEEEccCC
Q 022184 267 DICVVDVKKMEINHWSK------RL--------------HLGTSIALVEFCPTQ 300 (301)
Q Consensus 267 ~i~i~~~~~~~~~~~~~------~~--------------~~~~~v~~~~~spdg 300 (301)
.|++||+.+++.+..+. .. | ..+|++++|+|+|
T Consensus 314 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~v~~~~~~~~g 366 (397)
T 1sq9_A 314 KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA-EPGVFDVKFLKKG 366 (397)
T ss_dssp EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCS-SCCEEEEEEECTT
T ss_pred eEEEEEcCCCceeEEEecccCcccchhhhhcccccccccc-CCceeEEEecccc
Confidence 99999999998877764 21 3 6789999999997
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=262.77 Aligned_cols=254 Identities=15% Similarity=0.168 Sum_probs=190.2
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+ +.++++|+ .|+.+++|+........ ........+.+|.+.|.+++|+|++++|++++
T Consensus 57 h~~~v~~v~~sp~---~~~las~s------~D~~v~iw~~~~~~~~~-~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s 126 (330)
T 2hes_X 57 HKKAIRSVAWRPH---TSLLAAGS------FDSTVSIWAKEESADRT-FEMDLLAIIEGHENEVKGVAWSNDGYYLATCS 126 (330)
T ss_dssp CCSCEEEEEECTT---SSEEEEEE------TTSCEEEEEC--------CCCEEEEEEC----CEEEEEECTTSCEEEEEE
T ss_pred ccCCEEEEEECCC---CCEEEEEe------CCCcEEEEEcccCcCcc-ccceeEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 4578999999987 57888866 67888999885322110 01223456789999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc--ceecccccCCccEEEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL--RIILDEPKAHKSVLDM 160 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~i~~~ 160 (301)
.|++|++||+.......... .....|...|.+++|+|++++|++++.|+.|++||..++ +.+..+.+|...|.++
T Consensus 127 ~D~~v~iwd~~~~~~~~~~~---~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~ 203 (330)
T 2hes_X 127 RDKSVWIWETDESGEEYECI---SVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSS 203 (330)
T ss_dssp TTSCEEEEECCTTCCCCEEE---EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEeccCCCCCeEEE---EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEE
Confidence 99999999995432111111 011247789999999999999999999999999998765 5666778888999999
Q ss_pred EecCC--CcEEEEEeCCCcEEEEeCCCC--------ceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEE
Q 022184 161 DFSLD--SEFLATTSTDGSARIWKTEDG--------VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (301)
Q Consensus 161 ~~~~~--~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d 230 (301)
+|+|+ +.+|++++.|++|++||++.+ .....+...+...|.+++|++++. +++++.|+.|++||
T Consensus 204 ~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~------l~s~~~dg~v~iw~ 277 (330)
T 2hes_X 204 DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGL------IASVGADGVLAVYE 277 (330)
T ss_dssp EECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSC------EEEEETTSCEEEEE
T ss_pred EecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCE------EEEEeCCCEEEEEE
Confidence 99998 678999999999999998764 233344443566799999997763 68889999999999
Q ss_pred ccCce--Eee-eeeccCC-CcEEEEEcC--CCCEEEEeeCCCcEEEEeCCC
Q 022184 231 ISTWN--KIG-HKRLLRK-PASVLSISL--DGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 231 ~~~~~--~~~-~~~~~~~-~v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~ 275 (301)
..+++ ... ....|.. .|.+++|+| ++++|++++.||.|++|++++
T Consensus 278 ~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 278 EVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 98764 222 2345666 899999999 789999999999999999864
No 34
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=274.09 Aligned_cols=262 Identities=13% Similarity=0.124 Sum_probs=202.7
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceee---eCCceeccccccC------------Ccce
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVY---TSPLVTYVFDESE------------GDPM 67 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~h~------------~~v~ 67 (301)
...+|+|++|+|+ +.++|+|+ .++.+++|++........ ........+.+|. +.|.
T Consensus 27 ~~~~V~~v~~s~~---g~~la~g~------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~ 97 (447)
T 3dw8_B 27 EADIISTVEFNHS---GELLATGD------KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN 97 (447)
T ss_dssp GGGSEEEEEECSS---SSEEEEEE------TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC
T ss_pred ccCcEEEEEECCC---CCEEEEEc------CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE
Confidence 4578999999987 67888876 677889999875442100 0111244577898 8899
Q ss_pred EEEECCCC--CeEEEEecCCcEEEEEEcCCcccccccc---------------------------------ccCCCCCCC
Q 022184 68 TIAVNPSG--DDFVCSTTNGGCKLFEVYGGATDINLLA---------------------------------KKMPPLQDA 112 (301)
Q Consensus 68 ~~~~~~~~--~~l~~~~~d~~i~~w~~~~~~~~~~~~~---------------------------------~~~~~~~~~ 112 (301)
+++|+|++ .+|++++.|+.|++|++........... .......|.
T Consensus 98 ~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 177 (447)
T 3dw8_B 98 KIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT 177 (447)
T ss_dssp EEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred EEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence 99999998 7899999999999999976443110000 000023477
Q ss_pred CCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc-eec-------ccccCCccEEEEEecCCC-cEEEEEeCCCcEEEEeC
Q 022184 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-IIL-------DEPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKT 183 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~-~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~ 183 (301)
..|.+++|+|++++|++| .|+.|++||+++.. ... .+..|...|.+++|+|++ ++|++++.|+.|++||+
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred cceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 899999999999999998 79999999998433 332 355778899999999998 89999999999999999
Q ss_pred CCCce----EEEEeecCC-----------CCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC-ceEeeeeeccCCC-
Q 022184 184 EDGVA----WTFLTRNSD-----------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST-WNKIGHKRLLRKP- 246 (301)
Q Consensus 184 ~~~~~----~~~~~~~~~-----------~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~- 246 (301)
++++. ...+..+.. ..|.+++|+|++++ +++++. +.|++||+++ ++++..+..|...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-----l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-----MMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-----EEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCE-----EEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 99886 666765543 26999999999997 567777 9999999997 7777777766431
Q ss_pred --------------cEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeec
Q 022184 247 --------------ASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH 280 (301)
Q Consensus 247 --------------v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~ 280 (301)
+..++|+|++++|++++.||.|++||+.+++.+.
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 2348999999999999999999999999887653
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.6e-39 Score=264.13 Aligned_cols=246 Identities=14% Similarity=0.174 Sum_probs=206.7
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|+|+ +.++++|+ .++.+++|+.+..... ....+.+|...|.+++|+|++++|++++
T Consensus 7 ~~~~i~~~~~s~~---~~~l~~~~------~d~~v~i~~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 7 LVEPISCHAWNKD---RTQIAICP------NNHEVHIYEKSGNKWV------QVHELKEHNGQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp CSSCCCEEEECTT---SSEEEEEC------SSSEEEEEEEETTEEE------EEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred cCCCeEEEEECCC---CCEEEEEe------CCCEEEEEeCCCCcEE------eeeeecCCCCcccEEEEeCCCCEEEEEc
Confidence 4678999999987 67888865 5677899988654311 2345678999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcce---e-cccccCCccEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI---I-LDEPKAHKSVL 158 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~---~-~~~~~~~~~i~ 158 (301)
.|+.|++||+++++.... .....|...|.+++|+|++++|++++.|+.|++||++.++. . .....|...|.
T Consensus 72 ~dg~i~vwd~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~ 146 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPT-----LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 146 (372)
T ss_dssp TTSCEEEEEEETTEEEEE-----EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred CCCeEEEEECCCCeeeee-----EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCee
Confidence 999999999987753222 11234678899999999999999999999999999987662 2 22345678999
Q ss_pred EEEecCCCcEEEEEeCCCcEEEEeCC------------------CCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEe
Q 022184 159 DMDFSLDSEFLATTSTDGSARIWKTE------------------DGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR 220 (301)
Q Consensus 159 ~~~~~~~~~~l~~~~~d~~i~i~d~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 220 (301)
+++|+|++++|++++.|+.|++||++ .++.+..+..+ ...+.+++|+|+++. ++++
T Consensus 147 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-----l~~~ 220 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSANGSR-----VAWV 220 (372)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECSSSSE-----EEEE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEEEEECCCCCE-----EEEE
Confidence 99999999999999999999999954 56777777644 457999999999987 7888
Q ss_pred CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 221 GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 221 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
+.|+.|++||+++++.+..+..+...+.+++|+|++++|+++ .|+.|++|++.+
T Consensus 221 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 221 SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp ETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred eCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999998999999999999999999988888 899999999987
No 36
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.2e-40 Score=268.84 Aligned_cols=257 Identities=18% Similarity=0.191 Sum_probs=211.0
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCC-CeEEEEe
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSG-DDFVCST 82 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~ 82 (301)
...|++++|+|+ +.++++|+ .|+.+++|++........ .......+.+|.+.|.++.|+|++ ..|++++
T Consensus 108 ~~~v~~~~~s~~---g~~las~~------~d~~v~iw~~~~~~~~~~-~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s 177 (380)
T 3iz6_a 108 CPWVMECAFAPN---GQSVACGG------LDSACSIFNLSSQADRDG-NMPVSRVLTGHKGYASSCQYVPDQETRLITGS 177 (380)
T ss_dssp CTTCCCCEECTT---SSEEEECC------SSSCCEEEECCCCSSCCC-SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC
T ss_pred CCCEEEEEECCC---CCEEEEee------CCCcEEEEECCCCccccC-CccceeeccCCCcceEEEEEecCCCCEEEEEC
Confidence 456889999988 67888876 677889999865332111 112234678999999999999964 5799999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeecCCeEEEEeCC-CcceecccccCCccEEEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWP-SLRIILDEPKAHKSVLDM 160 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~i~~~ 160 (301)
.|++|++||+.+++....+.. .....|...|.+++|+| ++++|++|+.|+.|++||++ ..+.+..+.+|...|.++
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v 255 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGS--EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSV 255 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECC--CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEE
T ss_pred CCCcEEEEEcCCCcEEEEeec--ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEE
Confidence 999999999988765332211 11234778999999987 88999999999999999997 446666777888999999
Q ss_pred EecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCC------CCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc
Q 022184 161 DFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234 (301)
Q Consensus 161 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 234 (301)
+|+|++++|++++.|++|++||+++++.+..+..+.. ..+.+++|+|+|++ +++++.|+.|++||+.++
T Consensus 256 ~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-----l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 256 KFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL-----LFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp EECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE-----EEEECTTSCEEEEETTTC
T ss_pred EEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE-----EEEEECCCCEEEEECCCC
Confidence 9999999999999999999999999998887764322 24889999999997 788999999999999988
Q ss_pred eEeeee----eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCce
Q 022184 235 NKIGHK----RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME 277 (301)
Q Consensus 235 ~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~ 277 (301)
+.+..+ ..|...|++++|+|+|++|++|+.|+.|++|++...+
T Consensus 331 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 331 EMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 776555 5788999999999999999999999999999997654
No 37
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.5e-39 Score=258.77 Aligned_cols=256 Identities=14% Similarity=0.176 Sum_probs=207.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
..++|+|++|+|+ ..+++++|+ .|+.+++|++....... ......+.+|...|.+++|+|++++|++++
T Consensus 37 H~~~V~~v~~sp~--~~~~l~S~s------~D~~i~vWd~~~~~~~~---~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 37 HNGWVTQIATTPQ--FPDMILSAS------RDKTIIMWKLTRDETNY---GIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CSSCEEEEEECTT--CTTEEEEEE------TTSCEEEEEECCSSSCS---EEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ccCCEEEEEEeCC--CCCEEEEEc------CCCeEEEEECCCCCccc---ceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 4688999999965 256888866 78889999997654321 122456789999999999999999999999
Q ss_pred cCCcEEEEEEcCCcccccc------------------------------c------cccCCCCCCCCCeeEEEEeeCC--
Q 022184 83 TNGGCKLFEVYGGATDINL------------------------------L------AKKMPPLQDAGPQKCLSFSVDG-- 124 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~------------------------------~------~~~~~~~~~~~~v~~~~~s~~~-- 124 (301)
.|+.|++|+.......... . ........|...+..++|++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 9999999998765431000 0 0011223456788999998854
Q ss_pred CEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEE
Q 022184 125 SRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCR 204 (301)
Q Consensus 125 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 204 (301)
.++++++.|+.|++||+++++.+..+..|.++|++++|+|++++|++++.|+.|++||+++.+.+..+..+ ..+.++.
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~ 263 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALC 263 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS--SCEEEEE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC--ceEEeee
Confidence 56889999999999999999998888889999999999999999999999999999999999998888754 3699999
Q ss_pred EccCCCcceEEEEEEeCCcceEEEEEccCceEeeee---------eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 205 FSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK---------RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
|+|++. +++++.|+.|++||++++..+..+ ..|...|++++|+|++++|++|+.||.|+|||+++
T Consensus 264 ~~~~~~------~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 264 FSPNRY------WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp ECSSSS------EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred cCCCCc------eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 999987 356677999999999987765443 35677899999999999999999999999999998
Q ss_pred ce
Q 022184 276 ME 277 (301)
Q Consensus 276 ~~ 277 (301)
|.
T Consensus 338 Gt 339 (340)
T 4aow_A 338 GT 339 (340)
T ss_dssp --
T ss_pred cC
Confidence 75
No 38
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.3e-39 Score=266.58 Aligned_cols=269 Identities=17% Similarity=0.216 Sum_probs=214.8
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC-CCCeEEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVCS 81 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~ 81 (301)
...+|+|++|+|+. ..++++|+ .++.+++|++....... ...+.+|...|.+++|+| ++++|+++
T Consensus 72 h~~~v~~~~~~~~~--~~~l~s~~------~dg~i~iwd~~~~~~~~------~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 72 FDRRVTSLEWHPTH--PTTVAVGS------KGGDIILWDYDVQNKTS------FIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp CSSCEEEEEECSSC--TTEEEEEE------BTSCEEEEETTSTTCEE------EECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEECCCC--CCEEEEEc------CCCeEEEEeCCCcccce------eeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 35789999999772 26888866 57788999987544221 233457999999999999 78999999
Q ss_pred ecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEE
Q 022184 82 TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMD 161 (301)
Q Consensus 82 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~ 161 (301)
+.|+.|++||+.+... ..+ .....+...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.+++
T Consensus 138 ~~d~~i~iwd~~~~~~-~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~ 211 (383)
T 3ei3_B 138 SIRGATTLRDFSGSVI-QVF----AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAE 211 (383)
T ss_dssp ETTTEEEEEETTSCEE-EEE----ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEE
T ss_pred eCCCEEEEEECCCCce-EEE----eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEE
Confidence 9999999999985332 111 112234578999999999999999999999999999 5667777888889999999
Q ss_pred ecCCCc-EEEEEeCCCcEEEEeCCC----CceEEEEeecCCCCeeEEEEcc-CCCcceEEEEEEeCCcceEEEEEccCce
Q 022184 162 FSLDSE-FLATTSTDGSARIWKTED----GVAWTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGDKALLAVYDISTWN 235 (301)
Q Consensus 162 ~~~~~~-~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 235 (301)
|+|+++ +|++++.|+.|++||+++ +..+..+. +...+.+++|+| ++.. +++++.|+.|++||+++++
T Consensus 212 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~-----l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 212 FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP--HEKPVNAAYFNPTDSTK-----LLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE--CSSCEEEEEECTTTSCE-----EEEEESSSEEEEEETTBTT
T ss_pred ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec--CCCceEEEEEcCCCCCE-----EEEEcCCCcEEEEECCCCc
Confidence 999999 999999999999999998 56666663 456799999999 9987 7888999999999999887
Q ss_pred EeeeeeccC-----------------CCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccccc-ccCccEEEEEEc
Q 022184 236 KIGHKRLLR-----------------KPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL-HLGTSIALVEFC 297 (301)
Q Consensus 236 ~~~~~~~~~-----------------~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~v~~~~~s 297 (301)
....+..+. ..+..++|+|++++ +++.|+.|++||+.+++.+..+... | ...+..++|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~-~~~~~~~~~s 361 (383)
T 3ei3_B 285 KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNA-AGIISLNKFS 361 (383)
T ss_dssp SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTB-CSCCCEEEEC
T ss_pred cccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCC-CceEEEEEEe
Confidence 665555432 23444667777766 7789999999999999988777432 4 6778888999
Q ss_pred cCCC
Q 022184 298 PTQR 301 (301)
Q Consensus 298 pdg~ 301 (301)
|||+
T Consensus 362 ~~g~ 365 (383)
T 3ei3_B 362 PTGD 365 (383)
T ss_dssp TTSS
T ss_pred cCcc
Confidence 9985
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3e-40 Score=276.23 Aligned_cols=272 Identities=17% Similarity=0.186 Sum_probs=212.1
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC-CCCeEEEEe
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVCST 82 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~ 82 (301)
...|+|++|+|. +.+++|+|+ .|+.|+||+++...... ...+.+|.+.|++++|+| ++++|++++
T Consensus 119 ~~~V~~l~~~P~--~~~~lasGs------~dg~i~lWd~~~~~~~~------~~~~~gH~~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 119 DRRATSLAWHPT--HPSTVAVGS------KGGDIMLWNFGIKDKPT------FIKGIGAGGSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp SSCEEEEEECSS--CTTCEEEEE------TTSCEEEECSSCCSCCE------EECCCSSSCCCCEEEECSSCTTEEEEEC
T ss_pred CCCEEEEEEeCC--CCCEEEEEe------CCCEEEEEECCCCCcee------EEEccCCCCCEEEEEEeCCCCCEEEEEe
Confidence 456999999964 256888876 67788999887554322 334678999999999998 688999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|++|++||+++...... .....+...+.+++|+|++++|++|+.||.|++||++. +.+..+..|...|.+++|
T Consensus 185 ~D~~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 185 MEGTTRLQDFKGNILRVF-----ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVAL 258 (435)
T ss_dssp SSSCEEEEETTSCEEEEE-----ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEE
T ss_pred CCCEEEEeeccCCceeEE-----eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeee
Confidence 999999999976543111 11112345678999999999999999999999999864 456677888899999999
Q ss_pred cCCCc-EEEEEeCCCcEEEEeCCCCceEEEEe--ecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeee
Q 022184 163 SLDSE-FLATTSTDGSARIWKTEDGVAWTFLT--RNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239 (301)
Q Consensus 163 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 239 (301)
+|+++ +|++++.|+.|++||+++.+....+. ..+...|.+++|+|++.+ +++++.|+.|++||+++++....
T Consensus 259 ~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~-----l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR-----LLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp CTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE-----EEEEESSSCEEEEESSSSSSEEE
T ss_pred cCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCe-----eEEEcCCCEEEEEECCCCccceE
Confidence 99886 78899999999999998866543332 234567999999999997 78999999999999998876655
Q ss_pred eeccCC------CcEEEEEcCCCCEEEEee------------CCCcEEEEeCCCceeeccccccccCccEEEE-EEccCC
Q 022184 240 KRLLRK------PASVLSISLDGKYLAMGS------------KDGDICVVDVKKMEINHWSKRLHLGTSIALV-EFCPTQ 300 (301)
Q Consensus 240 ~~~~~~------~v~~~~~s~~~~~l~~~~------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~-~~spdg 300 (301)
+..|.. .+....|+|++.+++++. .++.|++||..+++.+..+...| ...|.++ +|+|||
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~-~~~v~s~~~fspdg 412 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE-SSGISSLNEFNPMG 412 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS-CCCCCCEEEECTTS
T ss_pred EecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC-CCcEEEEEEECCCC
Confidence 544432 233456777777666654 23579999999999888776677 7888887 699998
Q ss_pred C
Q 022184 301 R 301 (301)
Q Consensus 301 ~ 301 (301)
+
T Consensus 413 ~ 413 (435)
T 4e54_B 413 D 413 (435)
T ss_dssp S
T ss_pred C
Confidence 5
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-40 Score=272.66 Aligned_cols=259 Identities=11% Similarity=0.142 Sum_probs=211.3
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCC-CCeEEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS-GDDFVCS 81 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~ 81 (301)
...+|++++|+|+ +.++++|+ .++.+++|++...... ......+.+|...|.+++|+|+ +++|+++
T Consensus 66 ~~~~v~~~~~s~~---~~~l~~~~------~dg~v~vw~~~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 132 (416)
T 2pm9_A 66 VDSKFNDLDWSHN---NKIIAGAL------DNGSLELYSTNEANNA----INSMARFSNHSSSVKTVKFNAKQDNVLASG 132 (416)
T ss_dssp CSSCEEEEEECSS---SSCEEEEE------SSSCEEEECCSSTTSC----CCEEEECCCSSSCCCEEEECSSSTTBEEEE
T ss_pred cCCceEEEEECCC---CCeEEEEc------cCCeEEEeeccccccc----ccchhhccCCccceEEEEEcCCCCCEEEEE
Confidence 4578999999987 56777765 5678899998763211 1124457889999999999998 8999999
Q ss_pred ecCCcEEEEEEcCCcccccc--ccccCCCCCCCCCeeEEEEeeC-CCEEEEeecCCeEEEEeCCCcceecccccC-----
Q 022184 82 TTNGGCKLFEVYGGATDINL--LAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLRIILDEPKA----- 153 (301)
Q Consensus 82 ~~d~~i~~w~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~----- 153 (301)
+.|+.|++||+.+.+..... .........|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 212 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSG 212 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSC
T ss_pred cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccc
Confidence 99999999999877621100 0001122347789999999998 789999999999999999998887777655
Q ss_pred -CccEEEEEecCCC-cEEEEEeCCC---cEEEEeCCCC-ceEEEEeecCCCCeeEEEEcc-CCCcceEEEEEEeCCcceE
Q 022184 154 -HKSVLDMDFSLDS-EFLATTSTDG---SARIWKTEDG-VAWTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGDKALL 226 (301)
Q Consensus 154 -~~~i~~~~~~~~~-~~l~~~~~d~---~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~i 226 (301)
...|.+++|+|++ .+|++++.|+ .|++||++++ .....+...+...+.+++|+| ++.. +++++.|+.|
T Consensus 213 ~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-----l~s~~~dg~v 287 (416)
T 2pm9_A 213 IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHL-----LLSSGRDNTV 287 (416)
T ss_dssp CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSC-----EEEEESSSEE
T ss_pred cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCe-----EEEEeCCCCE
Confidence 6789999999997 5899999998 9999999986 455555413455799999999 7876 7889999999
Q ss_pred EEEEccCceEeeeeeccCCCcEEEEEcCCC-CEEEEeeCCCcEEEEeCCCceee
Q 022184 227 AVYDISTWNKIGHKRLLRKPASVLSISLDG-KYLAMGSKDGDICVVDVKKMEIN 279 (301)
Q Consensus 227 ~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~ 279 (301)
++||+++++.+..+..|...+.+++|+|++ ++|++++.|+.|++|++.+.+..
T Consensus 288 ~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 288 LLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp EEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred EEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 999999999999999999999999999998 89999999999999999876543
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-39 Score=267.23 Aligned_cols=240 Identities=15% Similarity=0.236 Sum_probs=201.8
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 85 (301)
.|++++|+|+ +.++++|+ .|+.+++|++.... ....+.+|...|.+++|+|++++|++++.|+
T Consensus 125 ~v~~v~~s~d---g~~l~s~~------~d~~i~iwd~~~~~--------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 125 YIRSVCFSPD---GKFLATGA------EDRLIRIWDIENRK--------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDR 187 (393)
T ss_dssp BEEEEEECTT---SSEEEEEE------TTSCEEEEETTTTE--------EEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEEECCC---CCEEEEEc------CCCeEEEEECCCCc--------EEEEEccCCCCEEEEEEcCCCCEEEEecCCC
Confidence 4899999987 67888866 67788999886432 2345789999999999999999999999999
Q ss_pred cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeecCCeEEEEeCCCcceeccc-------ccCCccE
Q 022184 86 GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLRIILDE-------PKAHKSV 157 (301)
Q Consensus 86 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~-------~~~~~~i 157 (301)
+|++||+.+++.... +.+...+.+++|+| ++++|++++.|+.|++||+++++.+..+ ..|...|
T Consensus 188 ~v~iwd~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 188 TVRIWDLRTGQCSLT--------LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 259 (393)
T ss_dssp EEEEEETTTTEEEEE--------EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE
T ss_pred cEEEEECCCCeeEEE--------EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCE
Confidence 999999987765222 22456799999999 8999999999999999999988766554 4577899
Q ss_pred EEEEecCCCcEEEEEeCCCcEEEEeCCCCc------------eEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcce
Q 022184 158 LDMDFSLDSEFLATTSTDGSARIWKTEDGV------------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (301)
Q Consensus 158 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (301)
.+++|+|++++|++++.|+.|++||+++.. +...+..| ...|.+++|+|++.+ +++++.|+.
T Consensus 260 ~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~-----l~sgs~D~~ 333 (393)
T 1erj_A 260 YSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH-KDFVLSVATTQNDEY-----ILSGSKDRG 333 (393)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECC-SSCEEEEEECGGGCE-----EEEEETTSE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecc-cCcEEEEEECCCCCE-----EEEEeCCCe
Confidence 999999999999999999999999997642 33444444 457999999999997 789999999
Q ss_pred EEEEEccCceEeeeeeccCCCcEEEEEcC------CCCEEEEeeCCCcEEEEeCCCc
Q 022184 226 LAVYDISTWNKIGHKRLLRKPASVLSISL------DGKYLAMGSKDGDICVVDVKKM 276 (301)
Q Consensus 226 i~~~d~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~~~~~d~~i~i~~~~~~ 276 (301)
|++||.++++.+..+.+|...|.+++|++ ++++|++|+.|+.|+||+++..
T Consensus 334 v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 334 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 99999999999989999999999999986 6889999999999999998643
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-38 Score=260.90 Aligned_cols=265 Identities=15% Similarity=0.104 Sum_probs=223.9
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|+|+ +.++++|+ .++.+++|++.... ....+.+|...|.+++|+|++++|++++
T Consensus 31 h~~~v~~~~~s~~---~~~l~~~~------~dg~i~vwd~~~~~--------~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 31 HERPLTQVKYNKE---GDLLFSCS------KDSSASVWYSLNGE--------RLGTLDGHTGTIWSIDVDCFTKYCVTGS 93 (369)
T ss_dssp CSSCEEEEEECTT---SCEEEEEE------SSSCEEEEETTTCC--------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred eeceEEEEEEcCC---CCEEEEEe------CCCEEEEEeCCCch--------hhhhhhhcCCcEEEEEEcCCCCEEEEEe
Confidence 4678999999987 66888765 56778999875432 1345778999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC-----CeEEEEeCCCcce-----------
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-----GHLRIMHWPSLRI----------- 146 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~v~d~~~~~~----------- 146 (301)
.|+.|++||+.+++.... +.+...+.+++|+|+++++++++.+ +.|++||+.....
T Consensus 94 ~dg~i~iwd~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~ 165 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVAT--------WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEP 165 (369)
T ss_dssp TTTEEEEEETTTCCEEEE--------EECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSC
T ss_pred CCCeEEEEECCCCcEEEE--------eecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccce
Confidence 999999999988765222 2256789999999999999999998 9999999976542
Q ss_pred ecccccCCc--cEEEEEecCCCcEEEEEeCCCcEEEEeCCC-CceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCc
Q 022184 147 ILDEPKAHK--SVLDMDFSLDSEFLATTSTDGSARIWKTED-GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (301)
Q Consensus 147 ~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 223 (301)
...+..+.. .+.+++|+|++++|++++.|+.|++||+++ ++.+..+..+ ...+.+++|+|++.. +++++.|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-----l~~~~~d 239 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH-EKSISDMQFSPDLTY-----FITSSRD 239 (369)
T ss_dssp SEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC-SSCEEEEEECTTSSE-----EEEEETT
T ss_pred eeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC-CCceeEEEECCCCCE-----EEEecCC
Confidence 222333444 899999999999999999999999999998 6666667654 457999999999997 6888899
Q ss_pred ceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCC--------------cEEEEeCCCceeeccccccccCc
Q 022184 224 ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDG--------------DICVVDVKKMEINHWSKRLHLGT 289 (301)
Q Consensus 224 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--------------~i~i~~~~~~~~~~~~~~~~~~~ 289 (301)
+.|++||+++++.+..+. +...+..++|+|+++++++++.++ .+++||+.+++.+..+ ..| ..
T Consensus 240 ~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~-~~ 316 (369)
T 3zwl_B 240 TNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV-QGH-FG 316 (369)
T ss_dssp SEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE-ECC-SS
T ss_pred ceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe-ecc-cC
Confidence 999999999998877666 678899999999999999999888 8999999999988877 678 89
Q ss_pred cEEEEEEccCCC
Q 022184 290 SIALVEFCPTQR 301 (301)
Q Consensus 290 ~v~~~~~spdg~ 301 (301)
.|++++|+|||+
T Consensus 317 ~v~~~~~s~~~~ 328 (369)
T 3zwl_B 317 PLNTVAISPQGT 328 (369)
T ss_dssp CEEEEEECTTSS
T ss_pred cEEEEEECCCCC
Confidence 999999999985
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.9e-39 Score=276.82 Aligned_cols=261 Identities=15% Similarity=0.216 Sum_probs=220.7
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|.+++|+|+ +..+++++ .++.+++|+.+... ...+.+|...|.+++|+|++++|++++
T Consensus 261 ~~~~v~~v~~~~d---~~~l~~~~------~d~~i~~w~~~~~~---------~~~~~~h~~~v~~~~~~~~~~~l~t~~ 322 (577)
T 2ymu_A 261 HSSSVNGVAFRPD---GQTIASAS------DDKTVKLWNRNGQL---------LQTLTGHSSSVWGVAFSPDGQTIASAS 322 (577)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSCEEEEETTSCE---------EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEEcCC---CCEEEEEe------CCCEEEEEeCCCcE---------EEEEecCCCCeEEEEECCCCCEEEEEe
Confidence 3578999999987 56777755 56778998754321 234678999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++|+....... ....|...+.+++|+|++++|++++.|+.|++||. +++.+..+..|...|.+++|
T Consensus 323 ~d~~i~~w~~~~~~~~--------~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~ 393 (577)
T 2ymu_A 323 DDKTVKLWNRNGQHLQ--------TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAF 393 (577)
T ss_dssp TTSCEEEEETTSCEEE--------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEE
T ss_pred CCCeEEEEeCCCCeeE--------EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEE
Confidence 9999999997654331 11236688999999999999999999999999995 56667778888899999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
+|++++|++++.|+.|++||. +++.+..+..+ ...|.+++|+|+++. +++++.|+.|++||.. ++.+..+..
T Consensus 394 s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~-~~~v~~~~~s~d~~~-----l~~~~~d~~v~~w~~~-~~~~~~~~~ 465 (577)
T 2ymu_A 394 SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH-SSSVWGVAFSPDDQT-----IASASDDKTVKLWNRN-GQLLQTLTG 465 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECT-TCCEEEEEECC-SSCEEEEEECTTSSE-----EEEEETTSEEEEEETT-SCEEEEEEC
T ss_pred CCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCC-CCCeEEEEECCCCCE-----EEEEcCCCEEEEEECC-CCEEEEEcC
Confidence 999999999999999999995 56677777665 457999999999997 7889999999999974 567778888
Q ss_pred cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
|...|.+++|+|++++|++++.|+.|++||. +++.+..+ .+| ...|++++|+|||+
T Consensus 466 ~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~-~~h-~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 466 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL-TGH-SSSVRGVAFSPDGQ 521 (577)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEE-ECC-SSCEEEEEECTTSS
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEE-eCC-CCCEEEEEEcCCCC
Confidence 9999999999999999999999999999996 56666665 678 89999999999985
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-40 Score=272.84 Aligned_cols=279 Identities=14% Similarity=0.197 Sum_probs=225.6
Q ss_pred ceeEEEeeeecCCCccEEEecCCccc----cCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEE
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRA----SSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVC 80 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 80 (301)
.+|.|++|+|+. ..++++|...+. .+.++.+++|++...... . ......|...|.+++|+|++++|++
T Consensus 13 ~~v~~~~~sp~g--~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~-----~-~~~~~~~~~~v~~~~~s~~~~~l~~ 84 (416)
T 2pm9_A 13 SRTATFAWSHDK--IPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE-----K-PIASLQVDSKFNDLDWSHNNKIIAG 84 (416)
T ss_dssp EESCBCCBCSSS--SCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC-----S-CSCCCCCSSCEEEEEECSSSSCEEE
T ss_pred hhcceEeeCCCC--CCEEEEEecCcccccccCCCCeEEEEEccCCCCC-----c-EEEEEecCCceEEEEECCCCCeEEE
Confidence 478999999772 348888754331 147889999998765421 0 1112358899999999999999999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC-CCEEEEeecCCeEEEEeCCCcc------eecc---c
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLR------IILD---E 150 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~v~d~~~~~------~~~~---~ 150 (301)
++.|+.|++|++.......... .....|...|.+++|+|+ +++|++++.|+.|++||+.+++ .... .
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 161 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSM---ARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS 161 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEE---EECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS
T ss_pred EccCCeEEEeecccccccccch---hhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc
Confidence 9999999999998732111111 122347789999999998 8999999999999999998876 3222 3
Q ss_pred ccCCccEEEEEecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEeecC-----CCCeeEEEEccCCCcceEEEEEEeCCcc
Q 022184 151 PKAHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNS-----DEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (301)
Q Consensus 151 ~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 224 (301)
..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+. ...+.+++|+|++..+ +++++.++
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----l~~~~~d~ 237 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTR----VATATGSD 237 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTE----EEEEECCS
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCE----EEEEECCC
Confidence 567789999999998 7899999999999999999999988887653 5679999999998542 57777787
Q ss_pred ---eEEEEEccCc-eEeeeee-ccCCCcEEEEEcC-CCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEcc
Q 022184 225 ---LLAVYDISTW-NKIGHKR-LLRKPASVLSISL-DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP 298 (301)
Q Consensus 225 ---~i~~~d~~~~-~~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~sp 298 (301)
.|++||++++ +.+..+. .|...+.+++|+| ++++|++++.|+.|++||+++++.+..+ ..| ...|.+++|+|
T Consensus 238 ~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~-~~~-~~~v~~~~~s~ 315 (416)
T 2pm9_A 238 NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF-PAR-GNWCFKTKFAP 315 (416)
T ss_dssp SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE-ECS-SSCCCCEEECT
T ss_pred CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee-cCC-CCceEEEEECC
Confidence 9999999986 5566676 7889999999999 9999999999999999999999888877 578 88999999999
Q ss_pred CC
Q 022184 299 TQ 300 (301)
Q Consensus 299 dg 300 (301)
+|
T Consensus 316 ~~ 317 (416)
T 2pm9_A 316 EA 317 (416)
T ss_dssp TC
T ss_pred CC
Confidence 97
No 45
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.6e-39 Score=254.79 Aligned_cols=232 Identities=13% Similarity=0.109 Sum_probs=188.0
Q ss_pred cccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee--CCCEEEEeecCCe
Q 022184 58 VFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVDGH 135 (301)
Q Consensus 58 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~ 135 (301)
.+.+|.+.|.+++|+|+|++|++++.|++|++|++........ .....|.++|.+++|+| ++++|++|+.|++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~-----~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLI-----DTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCC-----EEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEE-----EEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 4678999999999999999999999999999999975422110 11224788999999986 4899999999999
Q ss_pred EEEEeCCCcc--eecccccCCccEEEEEecCC--CcEEEEEeCCCcEEEEeCCCCce--EEEEeecCCCCeeEEEEccCC
Q 022184 136 LRIMHWPSLR--IILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFSKDG 209 (301)
Q Consensus 136 i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~ 209 (301)
|++||+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+.. +...+.+++|+|++
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~-h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC-CSSCEEEEEECCCC
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec-ccCccceEeecCCc
Confidence 9999998764 34455667889999999997 88999999999999999987632 233443 45579999999973
Q ss_pred -------------CcceEEEEEEeCCcceEEEEEccCce----EeeeeeccCCCcEEEEEcCCC---CEEEEeeCCCcEE
Q 022184 210 -------------TKPFLFCTVQRGDKALLAVYDISTWN----KIGHKRLLRKPASVLSISLDG---KYLAMGSKDGDIC 269 (301)
Q Consensus 210 -------------~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~d~~i~ 269 (301)
+. +++++.|+.|++||+++++ ....+..|...|.+++|+|++ ++|++++.|+.|+
T Consensus 158 ~~~~~~~~~~~~~~~-----l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 158 IEEDGEHNGTKESRK-----FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp ------------CCE-----EEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred ccccccCCCCCCcce-----EEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 34 7889999999999998765 456678899999999999984 8999999999999
Q ss_pred EEeCCCce--e-eccc-cccccCccEEEEEEccCCC
Q 022184 270 VVDVKKME--I-NHWS-KRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 270 i~~~~~~~--~-~~~~-~~~~~~~~v~~~~~spdg~ 301 (301)
|||+++.. . ...+ ...| ...|.+++|+|||+
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSLSGN 267 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCC-SSCEEEEEECSSSC
T ss_pred EEEeCCCCCccceeeeecccC-CCcEEEEEECCCCC
Confidence 99998642 1 1111 1356 78899999999985
No 46
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4e-39 Score=289.16 Aligned_cols=268 Identities=11% Similarity=0.134 Sum_probs=233.7
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|+|+ +.++++|+ .++.+++|++.... ....+.+|...|.+++|+|++++|++++
T Consensus 12 h~~~v~~i~~sp~---~~~la~~~------~~g~v~iwd~~~~~--------~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 12 RSDRVKGIDFHPT---EPWVLTTL------YSGRVEIWNYETQV--------EVRSIQVTETPVRAGKFIARKNWIIVGS 74 (814)
T ss_dssp ECSCEEEEEECSS---SSEEEEEE------TTSEEEEEETTTTE--------EEEEEECCSSCEEEEEEEGGGTEEEEEE
T ss_pred CCCceEEEEECCC---CCEEEEEe------CCCEEEEEECCCCc--------eEEEEecCCCcEEEEEEeCCCCEEEEEe
Confidence 3578999999988 67888865 56778999875432 1335678999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc-ceecccccCCccEEEEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL-RIILDEPKAHKSVLDMD 161 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~i~~~~ 161 (301)
.||.|++||+.+++....+ ..|...|.+++|+|++++|++++.||.|++||++++ .....+..|...|.+++
T Consensus 75 ~dg~i~vw~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 75 DDFRIRVFNYNTGEKVVDF-------EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147 (814)
T ss_dssp TTSEEEEEETTTCCEEEEE-------ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEE
T ss_pred CCCeEEEEECCCCcEEEEE-------ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEE
Confidence 9999999999887653322 236788999999999999999999999999999886 55566677888999999
Q ss_pred ecC-CCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEcc--CCCcceEEEEEEeCCcceEEEEEccCceEee
Q 022184 162 FSL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK--DGTKPFLFCTVQRGDKALLAVYDISTWNKIG 238 (301)
Q Consensus 162 ~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 238 (301)
|+| +++.|++++.|+.|++||++++.....+..++...+..++|+| ++.. +++++.++.|++||+++++.+.
T Consensus 148 ~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----l~~~~~dg~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY-----MITASDDLTIKIWDYQTKSCVA 222 (814)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE-----EEEECTTSEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE-----EEEEeCCCEEEEEECCCCcEEE
Confidence 999 8899999999999999999998888888777666799999999 8876 7889999999999999999998
Q ss_pred eeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 239 HKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 239 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+..|...+.+++|+|++++|++++.||.|++||+.+++....+ ..| ...+.+++|+|+|+
T Consensus 223 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~-~~~v~~~~~~~~~~ 283 (814)
T 3mkq_A 223 TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL-NVG-LERSWCIATHPTGR 283 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE-CCS-SSSEEEEEECTTCG
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ecC-CCcEEEEEEccCCC
Confidence 89999999999999999999999999999999999999888776 456 78999999999974
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.3e-39 Score=265.24 Aligned_cols=259 Identities=10% Similarity=0.124 Sum_probs=206.6
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC-CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCC
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQD 111 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~ 111 (301)
.++.+.+|+++..+.. ......+.+|.+.|.+++|+| ++++|++++.|+.|++|++.++...............|
T Consensus 55 ~~g~i~v~~~~~~~~~----~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h 130 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRV----DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH 130 (402)
T ss_dssp SSCCEEEEETTCCEEC----CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred CCCEEEEEECccCCCC----CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence 5778899998654421 122345789999999999999 99999999999999999998774322111111122247
Q ss_pred CCCeeEEEEeeCC-CEEEEeecCCeEEEEeCCCcceeccc--ccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCce
Q 022184 112 AGPQKCLSFSVDG-SRFAAGGVDGHLRIMHWPSLRIILDE--PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA 188 (301)
Q Consensus 112 ~~~v~~~~~s~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 188 (301)
...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 7899999999998 69999999999999999999888777 67888999999999999999999999999999999999
Q ss_pred EEEE-eecCCCCeeEEEEccCCCcceEEEEEEe---CCcceEEEEEccCceE-eeeee-ccCCCcEEEEEcCCCCEEEE-
Q 022184 189 WTFL-TRNSDEKIELCRFSKDGTKPFLFCTVQR---GDKALLAVYDISTWNK-IGHKR-LLRKPASVLSISLDGKYLAM- 261 (301)
Q Consensus 189 ~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~d~~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~~- 261 (301)
+..+ ..+....+..+.|+|++.. ++++ +.++.|++||+++.+. +.... .+...+..++|+|++++|++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~-----l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKI-----LTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEE-----EEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred eeeeccCCCCCcceEEEEcCCCcE-----EEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEE
Confidence 8888 4554445899999999886 5666 7899999999988654 22222 45678999999999999975
Q ss_pred eeCCCcEEEEeCCCcee-ecccc-ccccCccEEEEEEccCCC
Q 022184 262 GSKDGDICVVDVKKMEI-NHWSK-RLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 262 ~~~d~~i~i~~~~~~~~-~~~~~-~~~~~~~v~~~~~spdg~ 301 (301)
++.|+.|++||+.+++. +..+. ..| ..+|.+++|+|+|+
T Consensus 286 g~~dg~i~i~d~~~~~~~~~~l~~~~~-~~~v~~~~~sp~~~ 326 (402)
T 2aq5_A 286 GKGDSSIRYFEITSEAPFLHYLSMFSS-KESQRGMGYMPKRG 326 (402)
T ss_dssp ETTCSCEEEEEECSSTTCEEEEEEECC-SSCCSEEEECCGGG
T ss_pred EcCCCeEEEEEecCCCcceEeeccccc-CCcccceEEecccc
Confidence 45799999999998873 32221 124 68999999999974
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-40 Score=269.66 Aligned_cols=244 Identities=13% Similarity=0.125 Sum_probs=192.8
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
.++|+|++|+|+ +.++++|+ .++.+++|+.+.... .....+.+|...|.+++|+|++++|++++.
T Consensus 11 ~~~v~~~~~s~~---g~~l~~~~------~d~~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 75 (377)
T 3dwl_C 11 PKPSYEHAFNSQ---RTEFVTTT------ATNQVELYEQDGNGW------KHARTFSDHDKIVTCVDWAPKSNRIVTCSQ 75 (377)
T ss_dssp SSCCSCCEECSS---SSEEECCC------SSSCBCEEEEETTEE------EECCCBCCCSSCEEEEEECTTTCCEEEEET
T ss_pred CCcEEEEEECCC---CCEEEEec------CCCEEEEEEccCCce------EEEEEEecCCceEEEEEEeCCCCEEEEEeC
Confidence 578999999987 67888866 567889999875421 124457899999999999999999999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcce---eccccc-CCccEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI---ILDEPK-AHKSVLD 159 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~---~~~~~~-~~~~i~~ 159 (301)
|+.|++||+.+++.... ......|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. |...|.+
T Consensus 76 d~~v~vwd~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 151 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTWKQ----TLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILS 151 (377)
T ss_dssp TSSEEEC------CCCC----EEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEE
T ss_pred CCeEEEEEcCCCCceee----eeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEE
Confidence 99999999988761000 122234778999999999999999999999999999988763 455655 7889999
Q ss_pred EEecCCCcEEEEEeCCCcEEEEeCCC------------------CceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeC
Q 022184 160 MDFSLDSEFLATTSTDGSARIWKTED------------------GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221 (301)
Q Consensus 160 ~~~~~~~~~l~~~~~d~~i~i~d~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (301)
++|+|++++|++++.|+.|++||++. ++.+..+ .+...|.+++|+|++++ +++++
T Consensus 152 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~-----l~~~~ 224 (377)
T 3dwl_C 152 LDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNA-----LAYAG 224 (377)
T ss_dssp EEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSC-----EEEEE
T ss_pred EEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCE-----EEEEe
Confidence 99999999999999999999999852 3444444 45667999999999997 78899
Q ss_pred CcceEEEEEccCceE----eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCC
Q 022184 222 DKALLAVYDISTWNK----IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 222 ~~~~i~~~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~ 274 (301)
.|+.|++||+++++. +..+..|...|.+++|+|++++|++++.++.+ +|+..
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 225 HDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 999999999999876 77888899999999999999999998766555 77665
No 49
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-38 Score=281.00 Aligned_cols=273 Identities=12% Similarity=0.148 Sum_probs=220.4
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
+..+|+|++|+++ +..++++|+ .|+.+++|++....... ......+.+|...|.+++|+|++++|++++
T Consensus 381 H~~~V~~v~~~~~--~~~~l~s~s------~D~~i~~W~~~~~~~~~---~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 381 HTDMVTAIATPID--NADIIVSAS------RDKSIILWKLTKDDKAY---GVAQRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CSSCEEEEECCTT--CCSEEEEEE------TTSEEEEEECCCSTTCS---CEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCceeEEEEecCC--CCCEEEEEe------CCCcEEEEEccCCCccc---ccccceecCCCCcEEEEEECCCCCEEEEEe
Confidence 4678999999965 356888766 77888999987644221 122346789999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceec---ccccCCccEEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL---DEPKAHKSVLD 159 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~---~~~~~~~~i~~ 159 (301)
.|++|++||+.++.....+ ..|...|.+++|+|++++|++++.|++|++||........ ....|...|.+
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~-------~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 522 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRF-------VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 522 (694)
T ss_dssp TTSEEEEEETTTTEEEEEE-------ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEE
T ss_pred CCCcEEEEECCCCcceeEE-------eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEE
Confidence 9999999999877653222 2477899999999999999999999999999986543322 12356678999
Q ss_pred EEecCCC--cEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEe
Q 022184 160 MDFSLDS--EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKI 237 (301)
Q Consensus 160 ~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 237 (301)
++|+|++ ..|++++.|++|++||+++++....+..|. ..|.+++|+|+++. +++++.|+.|++||+++++.+
T Consensus 523 ~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~-~~v~~v~~spdg~~-----l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 523 VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT-GYVSTVAVSPDGSL-----CASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSBCEEEETTTTEEE
T ss_pred EEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCC-CCEEEEEEeCCCCE-----EEEEeCCCeEEEEECCCCceE
Confidence 9999987 589999999999999999999888887654 57999999999997 789999999999999999887
Q ss_pred eeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccc-----------------cCccEEEEEEccCC
Q 022184 238 GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLH-----------------LGTSIALVEFCPTQ 300 (301)
Q Consensus 238 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----------------~~~~v~~~~~spdg 300 (301)
..+.. ...+.+++|+|++.+|++++ ++.|++||+++++.+..+.... ....+++++|+|||
T Consensus 597 ~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg 674 (694)
T 3dm0_A 597 YSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADG 674 (694)
T ss_dssp ECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTS
T ss_pred EEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCC
Confidence 66654 56799999999998888776 5569999999988765442110 01237899999998
Q ss_pred C
Q 022184 301 R 301 (301)
Q Consensus 301 ~ 301 (301)
+
T Consensus 675 ~ 675 (694)
T 3dm0_A 675 S 675 (694)
T ss_dssp S
T ss_pred C
Confidence 5
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.9e-38 Score=255.18 Aligned_cols=268 Identities=13% Similarity=0.161 Sum_probs=217.6
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..+|.+++|+|+ +++++++.... .+..|... .... .....+|.+.|.+++|+|++++|++++
T Consensus 9 ~~~v~~~~~s~d---g~~~~~~~~~~------~~~~~~~~-~~~~-------~~~~~~h~~~v~~~~~~~~~~~l~~~~- 70 (337)
T 1gxr_A 9 SKPAYSFHVTAD---GQMQPVPFPPD------ALIGPGIP-RHAR-------QINTLNHGEVVCAVTISNPTRHVYTGG- 70 (337)
T ss_dssp EEECCEEEECSS---SCEEECCCCTT------SSSSTTCC-SEEE-------EEEEECCSSCCCEEEECSSSSEEEEEC-
T ss_pred CCceeEEEECCC---CCEEEeecCCC------cEeccccC-Cccc-------cceeccCCCceEEEEEecCCcEEEEcC-
Confidence 468999999988 67887765322 22233221 1111 122347999999999999999999998
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc--eecccccCCccEEEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR--IILDEPKAHKSVLDMD 161 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~ 161 (301)
|+.|++|++.+......... .....|...+.+++|+|++++|++++.|+.|++||+++++ ....+..+...+.+++
T Consensus 71 dg~i~iw~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 148 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQ--LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA 148 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEE--EECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEE
T ss_pred CCeEEEEECCCCCceeeeec--ccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEE
Confidence 99999999987654222211 1122467899999999999999999999999999998876 4555667778999999
Q ss_pred ecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee
Q 022184 162 FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (301)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 241 (301)
|+|++++|++++.|+.|++||+++++.+..+..+ ...+.+++|+|+++. +++++.|+.|++||+++++.+..+
T Consensus 149 ~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~-----l~~~~~dg~i~~~d~~~~~~~~~~- 221 (337)
T 1gxr_A 149 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDISNDGTK-----LWTGGLDNTVRSWDLREGRQLQQH- 221 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTTEEEEEE-
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc-cCceEEEEECCCCCE-----EEEEecCCcEEEEECCCCceEeee-
Confidence 9999999999999999999999999988888765 457999999999987 688889999999999998887665
Q ss_pred ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 242 LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 242 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+...+.+++|+|++++|++++.|+.|++||+.+++.... ..| ...|.+++|+|||+
T Consensus 222 ~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~--~~~-~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 222 DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL--HLH-ESCVLSLKFAYCGK 278 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE--CCC-SSCEEEEEECTTSS
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE--cCC-ccceeEEEECCCCC
Confidence 4677899999999999999999999999999999876543 467 88999999999985
No 51
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=258.00 Aligned_cols=272 Identities=8% Similarity=0.107 Sum_probs=213.0
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCC---CCeEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS---GDDFV 79 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~ 79 (301)
...+|++++|+|+. ..++++|+.. ..++.+++|+++...... ....+|...|.+++|+|+ +++|+
T Consensus 17 h~~~v~~~~~~p~~--~~l~~~~s~~---~~d~~v~iw~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~l~ 84 (357)
T 3i2n_A 17 FNYTVFDCKWVPCS--AKFVTMGNFA---RGTGVIQLYEIQHGDLKL-------LREIEKAKPIKCGTFGATSLQQRYLA 84 (357)
T ss_dssp CSSCEEEEEECTTS--SEEEEEEC-----CCCEEEEEEEECSSSEEE-------EEEEEESSCEEEEECTTCCTTTCCEE
T ss_pred CCCceEEEEEcCCC--ceEEEecCcc---CCCcEEEEEeCCCCcccc-------eeeecccCcEEEEEEcCCCCCCceEE
Confidence 45789999999762 3566665420 127788999987543211 122378999999999998 69999
Q ss_pred EEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEE------EeeCCCEEEEeecCCeEEEEeCCCcc-eeccccc
Q 022184 80 CSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLS------FSVDGSRFAAGGVDGHLRIMHWPSLR-IILDEPK 152 (301)
Q Consensus 80 ~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------~s~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~ 152 (301)
+++.|+.|++||+.+.+..... ...|...|.++. |+|++++|++++.|+.|++||+++++ ....+..
T Consensus 85 ~~~~dg~i~iwd~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 158 (357)
T 3i2n_A 85 TGDFGGNLHIWNLEAPEMPVYS------VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP 158 (357)
T ss_dssp EEETTSCEEEECTTSCSSCSEE------ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred EecCCCeEEEEeCCCCCccEEE------EEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence 9999999999999877621111 124778899995 57899999999999999999999876 4555544
Q ss_pred CCc----cEEEEE----ecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEcc---CCCcceEEEEEEeC
Q 022184 153 AHK----SVLDMD----FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK---DGTKPFLFCTVQRG 221 (301)
Q Consensus 153 ~~~----~i~~~~----~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~ 221 (301)
+.+ .+.+++ |+|++++|++++.|+.|++||+++++...... +...+.+++|+| ++.. +++++
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~-----l~~~~ 231 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN--IKNGVCSLEFDRKDISMNK-----LVATS 231 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEESCSSSSCCE-----EEEEE
T ss_pred cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC--CCCceEEEEcCCCCCCCCE-----EEEEC
Confidence 333 788888 78899999999999999999999988755433 345799999999 8887 68889
Q ss_pred CcceEEEEEccCceEeeeee-----ccCCCcEEEEEcCCCC-EEEEeeCCCcEEEEeCCCce------------------
Q 022184 222 DKALLAVYDISTWNKIGHKR-----LLRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKME------------------ 277 (301)
Q Consensus 222 ~~~~i~~~d~~~~~~~~~~~-----~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~------------------ 277 (301)
.|+.|++||+++++....+. .|...|.+++|+|+++ +|++++.||.|++||++++.
T Consensus 232 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~ 311 (357)
T 3i2n_A 232 LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSV 311 (357)
T ss_dssp STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEE
T ss_pred CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccc
Confidence 99999999999877654444 7889999999999998 89999999999999997542
Q ss_pred -eeccccccccCccEEEEEEccCCC
Q 022184 278 -INHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 278 -~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+..+ ..| ..+|++++|+|+|+
T Consensus 312 ~~~~~~-~~~-~~~v~~~~~s~~~~ 334 (357)
T 3i2n_A 312 SLLQNV-TLS-TQPISSLDWSPDKR 334 (357)
T ss_dssp EEEEEE-ECC-SSCEEEEEECSSST
T ss_pred ceeecc-ccC-CCCeeEEEEcCCCC
Confidence 33333 567 88999999999985
No 52
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.6e-38 Score=257.49 Aligned_cols=265 Identities=11% Similarity=0.035 Sum_probs=218.9
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCC-eEEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGD-DFVCS 81 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~ 81 (301)
...+|+|++|+|+ +.++++|+ .++.+++|+++....... ...+.+|...|.+++|+|+++ +|+++
T Consensus 10 h~~~v~~~~~s~~---~~~l~~~~------~d~~v~iw~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 10 PKDYISDIKIIPS---KSLLLITS------WDGSLTVYKFDIQAKNVD-----LLQSLRYKHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp CSSCEEEEEEEGG---GTEEEEEE------TTSEEEEEEEETTTTEEE-----EEEEEECSSCEEEEEEEESSSEEEEEE
T ss_pred CCCcEEEEEEcCC---CCEEEEEc------CCCeEEEEEeCCCCcccc-----ceeeeecCCceEEEEECCCCCcEEEEE
Confidence 4678999999987 67888765 677889999976552221 123458999999999999999 99999
Q ss_pred ecCCcEEEEEE-cCCccccccccccCCCCC--CCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCC---------cceecc
Q 022184 82 TTNGGCKLFEV-YGGATDINLLAKKMPPLQ--DAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS---------LRIILD 149 (301)
Q Consensus 82 ~~d~~i~~w~~-~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~---------~~~~~~ 149 (301)
+.|+.|++|++ .+++. ..... |...|.+++|+| +++|++++.|+.|++||+++ ++.+..
T Consensus 76 ~~dg~i~~wd~~~~~~~--------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 146 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF--------QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN 146 (342)
T ss_dssp ETTSCEEEECSSSSSSE--------EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS
T ss_pred cCCCeEEEEEeccCCce--------EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeE
Confidence 99999999999 77653 11223 778999999999 99999999999999999987 766655
Q ss_pred cccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCC-Cce-EEEEeecCCCCeeEEEEcc-CCCcceEEEEEEeCCcceE
Q 022184 150 EPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTED-GVA-WTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGDKALL 226 (301)
Q Consensus 150 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~i 226 (301)
+. +...+.+++|+|++ +++++.|+.|++||+++ +.. .......+...+.+++|+| +++. +++++.++.|
T Consensus 147 ~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~-----l~~~~~dg~i 218 (342)
T 1yfq_A 147 TK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG-----YACSSIDGRV 218 (342)
T ss_dssp SS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE-----EEEEETTSEE
T ss_pred Ee-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCE-----EEEEecCCcE
Confidence 54 77899999999887 99999999999999998 553 2333444566799999999 9987 6888899999
Q ss_pred EEEEccCc------eEeeeeeccCC---------CcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccE
Q 022184 227 AVYDISTW------NKIGHKRLLRK---------PASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSI 291 (301)
Q Consensus 227 ~~~d~~~~------~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v 291 (301)
++||++.. +....+..|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+...| ..+|
T Consensus 219 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h-~~~v 297 (342)
T 1yfq_A 219 AVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSV 297 (342)
T ss_dssp EEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SSEE
T ss_pred EEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhccc-CCCc
Confidence 99999876 55666666654 89999999999999999999999999999999888775445 7889
Q ss_pred EEEEEccCCC
Q 022184 292 ALVEFCPTQR 301 (301)
Q Consensus 292 ~~~~~spdg~ 301 (301)
.+++ |||+
T Consensus 298 ~~~~--~~~~ 305 (342)
T 1yfq_A 298 VKIA--CSDN 305 (342)
T ss_dssp EEEE--ECSS
T ss_pred eEec--CCCC
Confidence 9998 8874
No 53
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.3e-39 Score=258.06 Aligned_cols=246 Identities=10% Similarity=0.091 Sum_probs=196.3
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC--CCCeEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP--SGDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~ 80 (301)
...+|++++|+|+ ++++|+|+ .|+.+++|++...... ....+.+|.+.|.+++|+| ++++|++
T Consensus 12 H~~~V~~v~~s~~---g~~lasgs------~D~~v~lwd~~~~~~~------~~~~l~gH~~~V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 12 HEDMIHDAQMDYY---GTRLATCS------SDRSVKIFDVRNGGQI------LIADLRGHEGPVWQVAWAHPMYGNILAS 76 (316)
T ss_dssp --CCEEEEEECGG---GCEEEEEE------TTTEEEEEEEETTEEE------EEEEEECCSSCEEEEEECCGGGSSCEEE
T ss_pred ccCeEEEeeEcCC---CCEEEEEe------CCCeEEEEEecCCCcE------EEEEEcCCCccEEEEEeCCCCCCCEEEE
Confidence 4678999999988 67888866 7788899998654321 1345789999999999986 4899999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC--CCEEEEeecCCeEEEEeCCCcce---ecccccCCc
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRI---ILDEPKAHK 155 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~v~d~~~~~~---~~~~~~~~~ 155 (301)
++.|++|++||++++..... .....|...|.+++|+|+ +.+|++++.|+.|++||++.+.. ...+..|..
T Consensus 77 ~s~D~~v~iWd~~~~~~~~~-----~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 77 CSYDRKVIIWREENGTWEKS-----HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp EETTSCEEEECCSSSCCCEE-----EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred EECCCEEEEEECCCCcceEE-----EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 99999999999987542111 111247789999999997 78999999999999999987532 344556778
Q ss_pred cEEEEEecCC-----------------CcEEEEEeCCCcEEEEeCCCC---ceEEEEeecCCCCeeEEEEccCC----Cc
Q 022184 156 SVLDMDFSLD-----------------SEFLATTSTDGSARIWKTEDG---VAWTFLTRNSDEKIELCRFSKDG----TK 211 (301)
Q Consensus 156 ~i~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~~~~~----~~ 211 (301)
.+.+++|+|+ +++|++++.|+.|++||++.. +....+..| ...|.+++|+|++ ..
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h-~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH-SDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC-SSCEEEEECCCCSSCSCCE
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC-CCceEEEEecCCCCCCCce
Confidence 8999999997 468999999999999999765 344455544 4579999999987 44
Q ss_pred ceEEEEEEeCCcceEEEEEccCc---e-EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCC
Q 022184 212 PFLFCTVQRGDKALLAVYDISTW---N-KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~d~~~~---~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~ 274 (301)
+++++.|++|++||+++. + ....+..|...|.+++|+|++++|++++.|+.|++|+..
T Consensus 231 -----las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 231 -----IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp -----EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred -----EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 689999999999998762 1 123355678899999999999999999999999999986
No 54
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-38 Score=264.51 Aligned_cols=270 Identities=17% Similarity=0.225 Sum_probs=223.6
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..+|++++|+|+ +.++++|+ .++.+++|+. ... ....+.+|...|.+++|+|++++|++++.
T Consensus 108 ~~~v~~~~~s~~---~~~l~~~~------~dg~i~i~~~--~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (425)
T 1r5m_A 108 TNQVTCLAWSHD---GNSIVTGV------ENGELRLWNK--TGA-------LLNVLNFHRAPIVSVKWNKDGTHIISMDV 169 (425)
T ss_dssp CBCEEEEEECTT---SSEEEEEE------TTSCEEEEET--TSC-------EEEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred CCceEEEEEcCC---CCEEEEEe------CCCeEEEEeC--CCC-------eeeeccCCCccEEEEEECCCCCEEEEEec
Confidence 458999999987 67888765 5677899972 221 13446789999999999999999999999
Q ss_pred CCcEEEEEEcCCccccccccccCC--------CCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCc
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMP--------PLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK 155 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 155 (301)
|+.|++||+.+++....+...... .......+.++.|+|++ .+++++.++.|++||+++++.+..+..|..
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 248 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHG 248 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSS
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCC
Confidence 999999999877653322211100 00011228899999985 588899999999999999888878888889
Q ss_pred cEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce
Q 022184 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN 235 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 235 (301)
.|.+++|+|++++|++++.|+.|++||+++++....+..+ ...+.+++|+|++ . +++++.|+.|++||+++++
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~-~-----l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH-SQSIVSASWVGDD-K-----VISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCC-SSCEEEEEEETTT-E-----EEEEETTSEEEEEETTTTE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCC-CccEEEEEECCCC-E-----EEEEeCCCcEEEEECCCCc
Confidence 9999999999999999999999999999999888888654 4579999999999 4 6888999999999999999
Q ss_pred EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCce--------------------eeccccccccCc--cEEE
Q 022184 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME--------------------INHWSKRLHLGT--SIAL 293 (301)
Q Consensus 236 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--------------------~~~~~~~~~~~~--~v~~ 293 (301)
.+..+..+...+.+++|+|++++|++++.||.|++||+.+++ .+..+ ..| .. .|++
T Consensus 322 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~v~~ 399 (425)
T 1r5m_A 322 LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASY-QSS-QDNDYIFD 399 (425)
T ss_dssp EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEE-CCT-TCCCCEEE
T ss_pred EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhh-cCc-ccCCceEE
Confidence 998888899999999999999999999999999999999887 66665 455 44 9999
Q ss_pred EEEccCCC
Q 022184 294 VEFCPTQR 301 (301)
Q Consensus 294 ~~~spdg~ 301 (301)
++|+|||+
T Consensus 400 ~~~s~~~~ 407 (425)
T 1r5m_A 400 LSWNCAGN 407 (425)
T ss_dssp EEECTTSS
T ss_pred EEccCCCc
Confidence 99999985
No 55
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-37 Score=247.65 Aligned_cols=262 Identities=12% Similarity=0.120 Sum_probs=220.7
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++| ++ ..++++|+ .++.+++|+++... ....+..|...|.+++|+|++++|++++
T Consensus 17 h~~~v~~~~~-~~---~~~l~s~~------~dg~v~vw~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 17 HDQDVRDVVA-VD---DSKVASVS------RDGTVRLWSKDDQW--------LGTVVYTGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp CSSCEEEEEE-EE---TTEEEEEE------TTSEEEEEEESSSE--------EEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCcEEEEe-cC---CCEEEEEE------cCCcEEEEECCCCE--------EEEEeecCCccEEEEEECCCCCEEEEec
Confidence 4678999999 76 56777765 67788999985432 1334668899999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++|++......... .....|...|.+++| +++++++++.|+.|++|| .++....+..|...+.+++|
T Consensus 79 ~dg~i~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~ 150 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPL----YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKV 150 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-----CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEE
T ss_pred CCCeEEEEEeeecCCCCcc----cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEE
Confidence 9999999999765432111 112246788999999 577999999999999999 56666777788899999999
Q ss_pred cC-CCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee
Q 022184 163 SL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (301)
Q Consensus 163 ~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 241 (301)
.| +++++++++.|+.|++|| ..+....+...+...+.+++|+|++. +++++.++.|++||+++++.+..+.
T Consensus 151 ~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 151 VSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH------FISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE------EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe------EEEccCCCeEEEEECCchhhhhhhh
Confidence 98 899999999999999999 45666677665667899999999998 4788899999999999999999999
Q ss_pred ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 242 LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 242 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.|...+.+++|+|++ .|++++.||.|++||+.+++....+ ..| ...|.+++|+|+|+
T Consensus 223 ~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~-~~~-~~~i~~~~~~~~~~ 279 (313)
T 3odt_A 223 GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVI-TLP-AISIWSVDCMSNGD 279 (313)
T ss_dssp CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEE-ECS-SSCEEEEEECTTSC
T ss_pred cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEE-ecc-CceEEEEEEccCCC
Confidence 999999999999999 5899999999999999999988877 567 78999999999985
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-38 Score=265.56 Aligned_cols=264 Identities=11% Similarity=0.136 Sum_probs=210.6
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCc
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 86 (301)
+.+..|+++ +.++++|+ .++.+++|++.... ....+.+|.+.|.+++|+|++++|++++.|+.
T Consensus 100 ~~~~~~~~~---~~~l~~~~------~dg~i~iwd~~~~~--------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~ 162 (420)
T 3vl1_A 100 TAVDTAKLQ---MRRFILGT------TEGDIKVLDSNFNL--------QREIDQAHVSEITKLKFFPSGEALISSSQDMQ 162 (420)
T ss_dssp EEEEEECSS---SCEEEEEE------TTSCEEEECTTSCE--------EEEETTSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eEEEEEecC---CCEEEEEE------CCCCEEEEeCCCcc--------eeeecccccCccEEEEECCCCCEEEEEeCCCe
Confidence 444466666 56788765 56778999875322 13346789999999999999999999999999
Q ss_pred EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccC---C---------
Q 022184 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA---H--------- 154 (301)
Q Consensus 87 i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~---~--------- 154 (301)
|++||+.+++....+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+ .
T Consensus 163 i~iwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 163 LKIWSVKDGSNPRTL-------IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp EEEEETTTCCCCEEE-------ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred EEEEeCCCCcCceEE-------cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 999999877653222 237789999999999999999999999999999998877666532 2
Q ss_pred ------------ccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCC-cceEEEEEEeC
Q 022184 155 ------------KSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGT-KPFLFCTVQRG 221 (301)
Q Consensus 155 ------------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~ 221 (301)
..+.+++|+|++++|++++.|+.|++||+++++....+...+...+.+++|+|++. . +++++
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----l~~g~ 310 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANY-----IYAGY 310 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTE-----EEEEE
T ss_pred cCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCE-----EEEEe
Confidence 33444556889999999999999999999999988888776677899999999998 5 68899
Q ss_pred CcceEEEEEccCceE-eeeeec-cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeec--------cccccccCccE
Q 022184 222 DKALLAVYDISTWNK-IGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH--------WSKRLHLGTSI 291 (301)
Q Consensus 222 ~~~~i~~~d~~~~~~-~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~--------~~~~~~~~~~v 291 (301)
.|+.|++||+++++. +..+.. +...+.++.+ +++++|++++.|+.|++|++...+... .....| ...|
T Consensus 311 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~v 388 (420)
T 3vl1_A 311 ENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSN-DDAV 388 (420)
T ss_dssp TTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCS-SCCC
T ss_pred CCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccC-Ccce
Confidence 999999999998754 555665 5667777755 578899999999999999988742211 111345 7889
Q ss_pred EEEEEccCCC
Q 022184 292 ALVEFCPTQR 301 (301)
Q Consensus 292 ~~~~~spdg~ 301 (301)
.+++|+|||+
T Consensus 389 ~~~~~s~~~~ 398 (420)
T 3vl1_A 389 SQFCYVSDDE 398 (420)
T ss_dssp CEEEEECCSS
T ss_pred EEEEEccCCC
Confidence 9999999985
No 57
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.6e-39 Score=257.87 Aligned_cols=234 Identities=12% Similarity=0.089 Sum_probs=184.1
Q ss_pred ccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee--CCCEEEEeecCC
Q 022184 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVDG 134 (301)
Q Consensus 57 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg 134 (301)
..+.+|.+.|.+++|+|+|++|++++.|++|++||+.++..... .....|...|.+++|+| ++++|++++.|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~-----~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILI-----ADLRGHEGPVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEE-----EEEECCSSCEEEEEECCGGGSSCEEEEETTS
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEE-----EEEcCCCccEEEEEeCCCCCCCEEEEEECCC
Confidence 45679999999999999999999999999999999987642111 11124788999999986 489999999999
Q ss_pred eEEEEeCCCcc--eecccccCCccEEEEEecCC--CcEEEEEeCCCcEEEEeCCCCceEE--EEeecCCCCeeEEEEccC
Q 022184 135 HLRIMHWPSLR--IILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVAWT--FLTRNSDEKIELCRFSKD 208 (301)
Q Consensus 135 ~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~ 208 (301)
+|++||+++++ ....+..|...|.+++|+|+ +.+|++++.|+.|++||++.+.... .....+...+.+++|+|+
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 99999998764 44556678889999999997 7899999999999999998764322 122234456899999998
Q ss_pred C-----------------CcceEEEEEEeCCcceEEEEEccCc---eEeeeeeccCCCcEEEEEcCCC----CEEEEeeC
Q 022184 209 G-----------------TKPFLFCTVQRGDKALLAVYDISTW---NKIGHKRLLRKPASVLSISLDG----KYLAMGSK 264 (301)
Q Consensus 209 ~-----------------~~~~~~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~ 264 (301)
. +. +++++.|+.|++||++.. +.+..+..|...|.+++|+|++ ++|++++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~-----l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKR-----FASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp CCC------CCSCCCCCCCB-----EECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred cCCccccccccccCccccce-----EEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 3 34 689999999999999754 4566788899999999999986 89999999
Q ss_pred CCcEEEEeCCCc---eeeccccccccCccEEEEEEccCCC
Q 022184 265 DGDICVVDVKKM---EINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 265 d~~i~i~~~~~~---~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
|++|++|++.+. +........| ...|.+++|+|+|+
T Consensus 237 D~~v~iw~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~g~ 275 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNTWSPKLLHKF-NDVVWHVSWSITAN 275 (316)
T ss_dssp TCEEEEEECSSTTCCCCBCCEEEEC-SSCEEEEEECTTTC
T ss_pred CCeEEEEEccCccccchhhhhhhcC-CCcEEEEEEcCCCC
Confidence 999999999863 2111222457 88999999999985
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-39 Score=267.40 Aligned_cols=277 Identities=13% Similarity=0.122 Sum_probs=215.4
Q ss_pred CceeEEEeeee-cCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 4 GGTVTCGSWIK-RPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 4 ~~~v~~~~w~~-~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
..+|+|++|+| + +.++++|+ .|+.+++|++........ ...... .+|...|.+++|+|++++|++++
T Consensus 63 ~~~V~~~~~s~~~---~~~l~s~s------~dg~v~vwd~~~~~~~~~--~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 63 PNSITSSAVSPGE---TPYLITGS------DQGVIKIWNLKEIIVGEV--YSSSLT-YDCSSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp TSCEEEEEEECSS---SCEEEEEE------TTSEEEEEEHHHHHTTCC--CSCSEE-EECSSCEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEECCCC---CCEEEEec------CCceEEEeECcccccCcc--cceeee-ccCCCCEEEEEEeCCCCEEEEEe
Confidence 57999999998 6 66888866 678889999865211110 001111 25899999999999999999999
Q ss_pred cCCcEEEEEEc---CCccccccccccC---CCCC--CCCCeeEEE--EeeCCCEEEEeecCCeEEEEeCCCcceeccccc
Q 022184 83 TNGGCKLFEVY---GGATDINLLAKKM---PPLQ--DAGPQKCLS--FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK 152 (301)
Q Consensus 83 ~d~~i~~w~~~---~~~~~~~~~~~~~---~~~~--~~~~v~~~~--~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 152 (301)
.|+.|++||++ .++.......... .... +...+.++. +++++++|++++.|+.|++||+++++.+..+..
T Consensus 131 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 131 KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 99999999995 3332111111100 0001 456677777 557899999999999999999999998888877
Q ss_pred --CCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEcc----CCCcceEEEEEEeCCcceE
Q 022184 153 --AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK----DGTKPFLFCTVQRGDKALL 226 (301)
Q Consensus 153 --~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~~i 226 (301)
|...|++++|+|++++|++++.|+.|++||+++++.+..+...+..+|.+++|+| ++.. +++++.|+.|
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~-----l~s~~~dg~i 285 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI-----VVGGSSKTFL 285 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE-----EEEESTTEEE
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE-----EEEEcCCCcE
Confidence 6789999999999999999999999999999999998888744555799997765 4544 7899999999
Q ss_pred EEEEccCceEeeeeec--------------------------cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeec
Q 022184 227 AVYDISTWNKIGHKRL--------------------------LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH 280 (301)
Q Consensus 227 ~~~d~~~~~~~~~~~~--------------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~ 280 (301)
++||+++++.+..+.. |...|++++|+ ++++|++++.|+.|++||+.+++...
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 9999999887666553 33458889999 77999999999999999999887665
Q ss_pred cccc------------------------------------cccCccEEEEEEccC
Q 022184 281 WSKR------------------------------------LHLGTSIALVEFCPT 299 (301)
Q Consensus 281 ~~~~------------------------------------~~~~~~v~~~~~spd 299 (301)
.+.. .| ...|++++|+++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~I~~i~~~~~ 418 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYH-HDIINSISTCEV 418 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC--------------CCCEEEEEEEES
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCccccc-ccceeeEeeecc
Confidence 5432 17 788999999987
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.2e-39 Score=261.97 Aligned_cols=275 Identities=14% Similarity=0.168 Sum_probs=214.6
Q ss_pred CCceeEEEeeeecCCC-ccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCC----CCe
Q 022184 3 GGGTVTCGSWIKRPEN-VNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS----GDD 77 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~-~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~ 77 (301)
...+|++++|+|+... ...+++++ .++.+++|++........ ........|...|.+++|+|+ +++
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~------~~~~v~vw~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 87 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATV------GSNRVTLYECHSQGEIRL---LQSYVDADADENFYTCAWTYDSNTSHPL 87 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEE------ETTEEEEEEECGGGCEEE---EEEEECSCTTCCEEEEEEEECTTTCCEE
T ss_pred CCCceEEEEEecccCCCCceEEEEC------CCCEEEEEEcCCCcEEEe---eeeccccCCCCcEEEEEeccCCCCCCCE
Confidence 4689999999975221 23333333 345689999875432111 111122347789999999998 669
Q ss_pred EEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeecCCeEEEEeCCCcceeccc---ccC
Q 022184 78 FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLRIILDE---PKA 153 (301)
Q Consensus 78 l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~---~~~ 153 (301)
|++++.|+.|++||+.+++....+ ..|...|.+++|+| ++++|++++.||.|++||+++++....+ ..|
T Consensus 88 l~~~~~dg~i~v~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 160 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQCIKHY-------VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGH 160 (366)
T ss_dssp EEEEETTCEEEEECTTTCCEEEEE-------ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSC
T ss_pred EEEecCCCEEEEEEchhceEeeee-------cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccc
Confidence 999999999999999877653222 13778999999999 9999999999999999999998887766 578
Q ss_pred CccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee---------------------------cCCCCeeEEEEc
Q 022184 154 HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR---------------------------NSDEKIELCRFS 206 (301)
Q Consensus 154 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------------------------~~~~~v~~~~~~ 206 (301)
...|.+++|+|++++|++++.|+.|++||+++++....+.. .+...|.+++|+
T Consensus 161 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 240 (366)
T 3k26_A 161 RDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL 240 (366)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE
T ss_pred cCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc
Confidence 88999999999999999999999999999987654322211 145579999999
Q ss_pred cCCCcceEEEEEEeCCcceEEEEEccCceE--------------eeeeeccCCCcEEEEEcCC--CCEEEEeeCCCcEEE
Q 022184 207 KDGTKPFLFCTVQRGDKALLAVYDISTWNK--------------IGHKRLLRKPASVLSISLD--GKYLAMGSKDGDICV 270 (301)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--------------~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i 270 (301)
++. +++++.|+.|++||+++.+. +..+..|...+.+++|+|+ +++|++++.||.|++
T Consensus 241 --~~~-----l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~v 313 (366)
T 3k26_A 241 --GDL-----ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYV 313 (366)
T ss_dssp --TTE-----EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEE
T ss_pred --CCE-----EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEE
Confidence 555 78899999999999987643 6677778889999999999 999999999999999
Q ss_pred EeCCCceeec----ccccccc-CccEEEEEEccCCC
Q 022184 271 VDVKKMEINH----WSKRLHL-GTSIALVEFCPTQR 301 (301)
Q Consensus 271 ~~~~~~~~~~----~~~~~~~-~~~v~~~~~spdg~ 301 (301)
||+.+++... .+ ..|. ...|++++|+|||+
T Consensus 314 wd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 314 WDLEVEDPHKAKCTTL-THHKCGAAIRQTSFSRDSS 348 (366)
T ss_dssp EECCSSSGGGCEEEEE-CCTTCCSCEEEEEECTTSS
T ss_pred EECCCCCCccccceEE-cccccCCceEEEEeCCCCC
Confidence 9999876433 22 2221 58899999999985
No 60
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-38 Score=262.58 Aligned_cols=271 Identities=13% Similarity=0.117 Sum_probs=217.5
Q ss_pred CceeEEEeeeecCCCcc-EEEecCCccccCCcCceeEeee----CCCcceee--eCCceecc------ccccCCcceEEE
Q 022184 4 GGTVTCGSWIKRPENVN-LVVLGKSSRASSSPSVLEIFSF----DPKTTSVY--TSPLVTYV------FDESEGDPMTIA 70 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~-~~~~g~~~~~~~~~~~~~i~~~----~~~~~~~~--~~~~~~~~------~~~h~~~v~~~~ 70 (301)
..+|+|++|+|+ +. ++|+|+ .++.+++|++ ......+. ........ ..+|.+.|.+++
T Consensus 45 ~~~v~~~~~s~~---~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 45 LDNIVSSTWNPL---DESILAYGE------KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp CSCCSEEEECSS---CTTEEEEEE------TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred cCceEEEEECCC---CCcEEEEec------CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 368999999988 55 888866 6778899999 54331000 00011111 223688999999
Q ss_pred ECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccc
Q 022184 71 VNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150 (301)
Q Consensus 71 ~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 150 (301)
|+|++++|++++.|+.|++|+ .+++.... ...|...|.+++|+|++++|++++.|+.|++||+.+++.+..+
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 187 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWN-KTGALLNV-------LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF 187 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEE-TTSCEEEE-------ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEe-CCCCeeee-------ccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe
Confidence 999999999999999999999 33332111 1236789999999999999999999999999999998887777
Q ss_pred ccCCcc---------------EEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 151 PKAHKS---------------VLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 151 ~~~~~~---------------i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
..+... +.+++|+|++ .+++++.|+.|++||+++++.+..+..+ ...+.+++|+|+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~---- 261 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNKL---- 261 (425)
T ss_dssp CCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTTE----
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccC-CCceEEEEECCCCCE----
Confidence 666555 8999999975 5888999999999999999888887755 457999999999997
Q ss_pred EEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEE
Q 022184 216 CTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVE 295 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~ 295 (301)
+++++.|+.|++||+++++.+..+..|...+.+++|+|++ ++++++.|+.|++||+++++.+..+ ..| ...|.+++
T Consensus 262 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-~~~-~~~i~~~~ 337 (425)
T 1r5m_A 262 -LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS-IVD-GVPIFAGR 337 (425)
T ss_dssp -EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE-ECT-TCCEEEEE
T ss_pred -EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec-ccC-CccEEEEE
Confidence 6888899999999999998888888899999999999999 9999999999999999999988776 567 88999999
Q ss_pred EccCCC
Q 022184 296 FCPTQR 301 (301)
Q Consensus 296 ~spdg~ 301 (301)
|+|+|+
T Consensus 338 ~s~~~~ 343 (425)
T 1r5m_A 338 ISQDGQ 343 (425)
T ss_dssp ECTTSS
T ss_pred EcCCCC
Confidence 999985
No 61
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-39 Score=265.83 Aligned_cols=230 Identities=12% Similarity=0.042 Sum_probs=186.8
Q ss_pred ccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEE
Q 022184 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 59 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 138 (301)
+..|.++|.+++|+|++++|++++.|+.|++|++.++.... ......|...|.+++|+|++++|++++.|+.|++
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~-----~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKH-----ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYV 81 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEE-----CCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEE-----EEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 34467899999999999999999999999999998763100 1222247789999999999999999999999999
Q ss_pred EeCCCcc---eecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCce---EEEEeecCCCCeeEEEEccCCCcc
Q 022184 139 MHWPSLR---IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA---WTFLTRNSDEKIELCRFSKDGTKP 212 (301)
Q Consensus 139 ~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~ 212 (301)
||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+...+...|.+++|+|+++.
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~- 160 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL- 160 (377)
T ss_dssp C------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE-
T ss_pred EEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE-
Confidence 9998877 5556677888999999999999999999999999999998873 56666645668999999999987
Q ss_pred eEEEEEEeCCcceEEEEEcc------------------CceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCC
Q 022184 213 FLFCTVQRGDKALLAVYDIS------------------TWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 213 ~~~~~~~~~~~~~i~~~d~~------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~ 274 (301)
+++++.|+.|++||++ .++.+..+ .|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 161 ----l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 161 ----LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp ----EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred ----EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 7889999999999985 34455556 788899999999999999999999999999999
Q ss_pred Ccee----eccccccccCccEEEEEEccCCC
Q 022184 275 KMEI----NHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 275 ~~~~----~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+++. +..+ ..| ..+|.+++|+|||+
T Consensus 236 ~~~~~~~~~~~~-~~~-~~~v~~~~~s~~~~ 264 (377)
T 3dwl_C 236 APEQPPRALITV-KLS-QLPLRSLLWANESA 264 (377)
T ss_dssp STTSCEEECCCE-ECS-SSCEEEEEEEETTE
T ss_pred CCCCcceeeEee-cCC-CCceEEEEEcCCCC
Confidence 9876 5555 577 88999999999984
No 62
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.7e-37 Score=247.30 Aligned_cols=215 Identities=18% Similarity=0.261 Sum_probs=191.4
Q ss_pred eeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC
Q 022184 55 VTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG 134 (301)
Q Consensus 55 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 134 (301)
....+.+|.+.|.+++|+|++++|++++.|+.|++|++.+++....+ ..|...|.+++|+|++++|++++.|+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------SGHKLGISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh-------ccCCCceEEEEEcCCCCEEEEECCCC
Confidence 35568899999999999999999999999999999999876542221 24678899999999999999999999
Q ss_pred eEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceE
Q 022184 135 HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214 (301)
Q Consensus 135 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 214 (301)
.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+ ..++.+++|+|+++.
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~--- 163 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDGSL--- 163 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSE---
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC-CCcEEEEEEcCCCCE---
Confidence 9999999999988888889899999999999999999999999999999999988888765 457999999999997
Q ss_pred EEEEEeCCcceEEEEEccCceEeeeee-ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 215 FCTVQRGDKALLAVYDISTWNKIGHKR-LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 215 ~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
+++++.|+.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 164 --l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 164 --IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp --EEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred --EEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 7889999999999999988776553 44567999999999999999999999999999999877665
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.3e-38 Score=263.62 Aligned_cols=262 Identities=14% Similarity=0.114 Sum_probs=210.7
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCc
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 86 (301)
+++++|+|+ +.++++|+ .++.+++|+...... ...+..| ..+....|+|++++|++++.|+.
T Consensus 59 ~~~~~~s~~---g~~l~~~~------~d~~v~i~d~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~ 120 (420)
T 3vl1_A 59 GKGNTFEKV---GSHLYKAR------LDGHDFLFNTIIRDG--------SKMLKRA-DYTAVDTAKLQMRRFILGTTEGD 120 (420)
T ss_dssp CTTCEEEEE---ETTEEEEE------ETTEEEEEECCSEET--------TTTSCSC-CEEEEEEECSSSCEEEEEETTSC
T ss_pred ccceeeeec---CCeEEEEE------cCCcEEEEEecccce--------eeEEecC-CceEEEEEecCCCEEEEEECCCC
Confidence 457899988 66777765 567788988754321 1233444 44555678999999999999999
Q ss_pred EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEecCCC
Q 022184 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDS 166 (301)
Q Consensus 87 i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 166 (301)
|++||+.+++.... ...|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|++
T Consensus 121 i~iwd~~~~~~~~~-------~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 121 IKVLDSNFNLQREI-------DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRG 193 (420)
T ss_dssp EEEECTTSCEEEEE-------TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTT
T ss_pred EEEEeCCCcceeee-------cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCC
Confidence 99999886654211 12477899999999999999999999999999999998888888899999999999999
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEeec--CC---------------------CCeeEEEEccCCCcceEEEEEEeCCc
Q 022184 167 EFLATTSTDGSARIWKTEDGVAWTFLTRN--SD---------------------EKIELCRFSKDGTKPFLFCTVQRGDK 223 (301)
Q Consensus 167 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~---------------------~~v~~~~~~~~~~~~~~~~~~~~~~~ 223 (301)
++|++++.|+.|++||+++++.+..+..+ +. ..+.+++|+|+++. +++++.|
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-----l~~~~~d 268 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY-----VIAGHVS 268 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE-----EEEEETT
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE-----EEEEcCC
Confidence 99999999999999999999988888643 12 23444556788876 7889999
Q ss_pred ceEEEEEccCceEeeeee-ccCCCcEEEEEcCCCC-EEEEeeCCCcEEEEeCCCcee-eccccccccCccEEEEEEccCC
Q 022184 224 ALLAVYDISTWNKIGHKR-LLRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKMEI-NHWSKRLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 224 ~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~~~v~~~~~spdg 300 (301)
+.|++||+++++.+..+. .|...+.+++|+|+++ +|++++.||.|++||+++++. +..+...| ...|.++.|. +|
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~~~-~~ 346 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE-GTPINNVYFA-AG 346 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST-TSCEEEEEEE-TT
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC-CCCceEEEeC-CC
Confidence 999999999988765554 4678999999999998 999999999999999998754 44443335 7889888664 44
No 64
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.9e-37 Score=250.14 Aligned_cols=261 Identities=14% Similarity=0.100 Sum_probs=209.0
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC--CCCeEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP--SGDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~ 80 (301)
...+|+|++|+|+ +.++++|+ .++.+++|+++...... .....+.+|...|.+++|+| ++++|++
T Consensus 10 H~~~v~~~~~~~~---~~~l~~~~------~dg~i~iw~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 10 HDDLVHDVVYDFY---GRHVATCS------SDQHIKVFKLDKDTSNW----ELSDSWRAHDSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp CSSCEEEEEECSS---SSEEEEEE------TTSEEEEEEECSSSCCE----EEEEEEECCSSCEEEEEECCGGGCSEEEE
T ss_pred cccceeEEEEcCC---CCEEEEee------CCCeEEEEECCCCCCcc----eecceeccCCCcEEEEEEcCCCCCCEEEE
Confidence 4688999999987 66888865 67788999998654322 12445778999999999999 6999999
Q ss_pred EecCCcEEEEEEcCCcccccc--ccccCCCCCCCCCeeEEEEeeC--CCEEEEeecCCeEEEEeCCCcceecccc-----
Q 022184 81 STTNGGCKLFEVYGGATDINL--LAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRIILDEP----- 151 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~v~d~~~~~~~~~~~----- 151 (301)
++.|+.|++||+..+...... .........|...|.+++|+|+ +++|++++.||.|++||+++++.+..+.
T Consensus 77 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 156 (351)
T 3f3f_A 77 ASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM 156 (351)
T ss_dssp EETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE
T ss_pred EcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc
Confidence 999999999999876432100 0001112246789999999999 9999999999999999998877554332
Q ss_pred --------cCCccEEEEEecCC---CcEEEEEeCCCcEEEEeCCCCce--EEEEeecCCCCeeEEEEccCC----CcceE
Q 022184 152 --------KAHKSVLDMDFSLD---SEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFSKDG----TKPFL 214 (301)
Q Consensus 152 --------~~~~~i~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~----~~~~~ 214 (301)
.+...+.+++|+|+ +.++++++.|+.+.+|+...++. +..+.. +...|.+++|+|++ +.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~--- 232 (351)
T 3f3f_A 157 KVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQL--- 232 (351)
T ss_dssp ESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEE---
T ss_pred cccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC-CCcceeEEEECCCCCCcceE---
Confidence 45568999999997 89999999999998888877765 334443 45579999999998 44
Q ss_pred EEEEEeCCcceEEEEEccCc----------------------------------------------eEeeeeeccCCCcE
Q 022184 215 FCTVQRGDKALLAVYDISTW----------------------------------------------NKIGHKRLLRKPAS 248 (301)
Q Consensus 215 ~~~~~~~~~~~i~~~d~~~~----------------------------------------------~~~~~~~~~~~~v~ 248 (301)
+++++.|+.|++||++++ +.+..+..|...|+
T Consensus 233 --l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (351)
T 3f3f_A 233 --IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW 310 (351)
T ss_dssp --EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEE
T ss_pred --EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE
Confidence 688999999999999874 45666778889999
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 249 VLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 249 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
+++|+|++++|++++.||.|++|++.+++....+
T Consensus 311 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 311 SVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 9999999999999999999999999987655443
No 65
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.5e-37 Score=251.59 Aligned_cols=251 Identities=14% Similarity=0.107 Sum_probs=191.7
Q ss_pred eeEEEeeeecCCCccEEEecCCccc-----cCCcCceeEeeeCCCcceeeeCCc-eeccccccCCcceEEEECCCCCeEE
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRA-----SSSPSVLEIFSFDPKTTSVYTSPL-VTYVFDESEGDPMTIAVNPSGDDFV 79 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~ 79 (301)
.|+|++|..+ .++.|..... .+.++.+++|.++.....+..... .......+...+.+++|+|||++++
T Consensus 75 ~v~s~~~~~~-----~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la 149 (365)
T 4h5i_A 75 SPTAIDASKG-----IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAA 149 (365)
T ss_dssp CCCEEEEETT-----EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEE
T ss_pred ceEEEEeCCC-----EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEE
Confidence 4667766533 6666544321 246788999999876544422111 1122344566799999999999987
Q ss_pred EEe--cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceec--ccccCCc
Q 022184 80 CST--TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL--DEPKAHK 155 (301)
Q Consensus 80 ~~~--~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~~~~~ 155 (301)
+++ .|++|++||+++.+... .+.|...|.+++|+|||+++++++.+ .+++|+..+++.+. ....|..
T Consensus 150 ~as~~~d~~i~iwd~~~~~~~~--------~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 150 IASSKVPAIMRIIDPSDLTEKF--------EIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp EEESCSSCEEEEEETTTTEEEE--------EEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTE
T ss_pred EEECCCCCEEEEeECCCCcEEE--------EeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCC
Confidence 654 68999999998876522 22466789999999999999999855 56667666666543 2345667
Q ss_pred cEEEEEecCCCcEEEEEeCCC----cEEEEeCCCCceE----EEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEE
Q 022184 156 SVLDMDFSLDSEFLATTSTDG----SARIWKTEDGVAW----TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (301)
.|.+++|+|+++++++++.|+ .+++|++...... ..+.. +...|++++|+|+|++ +++++.|+.|+
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~-----lasgs~D~~V~ 294 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGEL-----AVLASNDNSIA 294 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCE-----EEEEETTSCEE
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCc-----eEEEcCCCEEE
Confidence 899999999999999999887 5888998776542 23333 4457999999999997 78999999999
Q ss_pred EEEccCceEeeee-eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCc
Q 022184 228 VYDISTWNKIGHK-RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKM 276 (301)
Q Consensus 228 ~~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~ 276 (301)
|||+++++++..+ .+|...|++++|+|||++|++++.|++|+||++...
T Consensus 295 iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 295 LVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999988764 689999999999999999999999999999999643
No 66
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.2e-36 Score=244.58 Aligned_cols=238 Identities=20% Similarity=0.246 Sum_probs=204.3
Q ss_pred eccccccCCcceEEEECCC-CCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC
Q 022184 56 TYVFDESEGDPMTIAVNPS-GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG 134 (301)
Q Consensus 56 ~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 134 (301)
..+|+||.+.|++++|+|+ +++|++|+.|++|++||+...+........ ....|...|.+++|+|++++|++++.|+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~--~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeE--EEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 4568999999999999997 679999999999999999876543222211 1124778999999999999999999999
Q ss_pred eEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceE
Q 022184 135 HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214 (301)
Q Consensus 135 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 214 (301)
.|++|+............+...+..+.+++++++|++++.|+.+++||+............+...+..++|++++...+
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 187 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI- 187 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE-
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE-
Confidence 9999999988877777777788999999999999999999999999999877665555445566799999999886543
Q ss_pred EEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEE
Q 022184 215 FCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALV 294 (301)
Q Consensus 215 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~ 294 (301)
+++++.|+.|++||+++++.+..+..|...|++++|+|++++|++++.|+.|++||+++.+.+..+. + ...|.++
T Consensus 188 --~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~-~~~v~~~ 262 (340)
T 4aow_A 188 --IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--G-GDIINAL 262 (340)
T ss_dssp --EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--C-SSCEEEE
T ss_pred --EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec--C-CceEEee
Confidence 4778899999999999999998999999999999999999999999999999999999999887763 3 5689999
Q ss_pred EEccCCC
Q 022184 295 EFCPTQR 301 (301)
Q Consensus 295 ~~spdg~ 301 (301)
+|+|++.
T Consensus 263 ~~~~~~~ 269 (340)
T 4aow_A 263 CFSPNRY 269 (340)
T ss_dssp EECSSSS
T ss_pred ecCCCCc
Confidence 9999863
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-37 Score=250.19 Aligned_cols=248 Identities=11% Similarity=0.114 Sum_probs=201.6
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCC--CCeEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS--GDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~ 80 (301)
...+|+|++|+|+ +.++++|+ .++.+++|+++...... ...+.+|.+.|.+++|+|+ +++|++
T Consensus 10 h~~~v~~~~~s~~---~~~l~~~~------~dg~i~iw~~~~~~~~~------~~~~~~h~~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 10 HNELIHDAVLDYY---GKRLATCS------SDKTIKIFEVEGETHKL------IDTLTGHEGPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp CCCCEEEEEECSS---SSEEEEEE------TTSCEEEEEEETTEEEE------EEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CcccEEEEEEcCC---CCEEEEEE------CCCcEEEEecCCCccee------eeEecCCCCcEEEEEeCCCCCCCEEEE
Confidence 4678999999988 66888765 57788999987544322 3457889999999999987 899999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC--CCEEEEeecCCeEEEEeCCCcce--ecccccCCcc
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRI--ILDEPKAHKS 156 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~ 156 (301)
++.|+.|++||+.+++.... .....|...|.+++|+|+ +++|++++.|+.|++||+++... ...+..|...
T Consensus 75 ~~~dg~v~iwd~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGRWSQI-----AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp EETTSCEEEEEEETTEEEEE-----EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC
T ss_pred eccCCEEEEEEcCCCceeEe-----eeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc
Confidence 99999999999998752111 111236789999999998 99999999999999999987743 3345577789
Q ss_pred EEEEEecC-------------CCcEEEEEeCCCcEEEEeCCCCceE----EEEeecCCCCeeEEEEccC---CCcceEEE
Q 022184 157 VLDMDFSL-------------DSEFLATTSTDGSARIWKTEDGVAW----TFLTRNSDEKIELCRFSKD---GTKPFLFC 216 (301)
Q Consensus 157 i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~~~v~~~~~~~~---~~~~~~~~ 216 (301)
|.+++|+| ++++|++++.|+.|++||++++... ..+.. +...|.+++|+|+ +..
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~----- 223 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSY----- 223 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEE-----
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec-ccCcEeEEEECCCCCCCCe-----
Confidence 99999999 6999999999999999999876533 33443 4557999999999 665
Q ss_pred EEEeCCcceEEEEEccCce-----EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCc
Q 022184 217 TVQRGDKALLAVYDISTWN-----KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKM 276 (301)
Q Consensus 217 ~~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~ 276 (301)
+++++.|+.|++||+++++ .+.....+...+.+++|+|++++|++++.||.|++|++...
T Consensus 224 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 7889999999999998863 22233447788999999999999999999999999999743
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-36 Score=252.06 Aligned_cols=261 Identities=13% Similarity=0.155 Sum_probs=201.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+|+ +.++++|+ .++.+++|+..... ....+.+|...|.+++| ++++|++++
T Consensus 133 ~~~~v~~v~~s~~---~~~l~~~~------~dg~i~iwd~~~~~--------~~~~~~~~~~~v~~~~~--~~~~l~~~~ 193 (401)
T 4aez_A 133 ESTYVASVKWSHD---GSFLSVGL------GNGLVDIYDVESQT--------KLRTMAGHQARVGCLSW--NRHVLSSGS 193 (401)
T ss_dssp TTCCEEEEEECTT---SSEEEEEE------TTSCEEEEETTTCC--------EEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred CCCCEEEEEECCC---CCEEEEEC------CCCeEEEEECcCCe--------EEEEecCCCCceEEEEE--CCCEEEEEc
Confidence 4678999999987 66888866 56778999876432 13346789999999999 567999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++||+......... ...|...|.+++|+|++++|++++.|+.|++||+++++....+..|...|.+++|
T Consensus 194 ~dg~i~i~d~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 267 (401)
T 4aez_A 194 RSGAIHHHDVRIANHQIGT------LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAW 267 (401)
T ss_dssp TTSEEEEEETTSSSCEEEE------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEE
T ss_pred CCCCEEEEecccCcceeeE------EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEE
Confidence 9999999999854332211 1236789999999999999999999999999999999888888888899999999
Q ss_pred cCCCc-EEEEEe--CCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEE--eCCcceEEEEEccCceEe
Q 022184 163 SLDSE-FLATTS--TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ--RGDKALLAVYDISTWNKI 237 (301)
Q Consensus 163 ~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~d~~~~~~~ 237 (301)
+|++. ++++++ .|+.|++||+++++.+..+.. ...+.+++|+|+++. +++ +..|+.|++||+.+++..
T Consensus 268 ~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~-----l~~~~g~~dg~i~v~~~~~~~~~ 340 (401)
T 4aez_A 268 CPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA--GSQVTSLIWSPHSKE-----IMSTHGFPDNNLSIWSYSSSGLT 340 (401)
T ss_dssp CTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEECSSSSE-----EEEEECTTTCEEEEEEEETTEEE
T ss_pred CCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEEECCCCCe-----EEEEeecCCCcEEEEecCCccce
Confidence 99775 556654 799999999999999888863 346999999999997 344 668999999999986554
Q ss_pred --eeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEE
Q 022184 238 --GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF 296 (301)
Q Consensus 238 --~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 296 (301)
..+..|...|.+++|+|++++|++++.||.|++|++.+++.+......+ ..+...+.|
T Consensus 341 ~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~i~~ 400 (401)
T 4aez_A 341 KQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPIPIT-KTPSSSITI 400 (401)
T ss_dssp EEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---------------------
T ss_pred eEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccccccc-CCCccceec
Confidence 3466788999999999999999999999999999999988776553333 444554443
No 69
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=246.70 Aligned_cols=273 Identities=11% Similarity=0.060 Sum_probs=216.2
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|+|+..++.++++|+ .++.+++|+++...... ...+.+|...|.+++|+|++++|++++
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~------~dg~i~iw~~~~~~~~~------~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGS------WANDVRCWEVQDSGQTI------PKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEE------TTSEEEEEEECTTSCEE------EEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceEEEEEcCCCCCceEEEEEC------CCCcEEEEEcCCCCcee------EEEeccccCCEEEEEECcCCCEEEEEc
Confidence 468899999997732246888866 67788999997644322 245678999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEE--eeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF--SVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDM 160 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 160 (301)
.|+.|++||+.+++... ...|...|.+++| +|++++|++++.||.|++||+++++.+..+..+ ..+.++
T Consensus 106 ~dg~v~iwd~~~~~~~~--------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~ 176 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQ--------IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCA 176 (368)
T ss_dssp TTSEEEEEETTTTEEEE--------EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEE
T ss_pred CCCcEEEEEcCCCCcee--------eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEE
Confidence 99999999998776421 2347789999999 889999999999999999999998877666544 466677
Q ss_pred EecCCCcEEEEEeCCCcEEEEeCCCCceEEEE-eecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc---eE
Q 022184 161 DFSLDSEFLATTSTDGSARIWKTEDGVAWTFL-TRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW---NK 236 (301)
Q Consensus 161 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~---~~ 236 (301)
.+.+ ..+++++.++.+++|+++........ .........++.+.++..... ..+++++.|+.|++||++.. ..
T Consensus 177 ~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 177 DVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP-TGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp EEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE-EEEEEEETTSEEEEEESSCSCHHHH
T ss_pred EecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC-CeEEEecCCCcEEEEecCCCCcccc
Confidence 6664 47888899999999999876554333 223334566777766654311 11578899999999999876 33
Q ss_pred eeeeeccCC------------CcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 237 IGHKRLLRK------------PASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 237 ~~~~~~~~~------------~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+..+..|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+ ..| ..+|++++|+|||+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~-~~~v~~~~~s~~g~ 328 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS-EQL-DQPISACCFNHNGN 328 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC-CCC-SSCEEEEEECTTSS
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe-cCC-CCCceEEEECCCCC
Confidence 445555554 7999999999999999999999999999999988877 578 89999999999985
No 70
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-36 Score=251.43 Aligned_cols=260 Identities=15% Similarity=0.133 Sum_probs=208.1
Q ss_pred CCceeEEEeeeec----CCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceecccccc-----CCcceEEEEC-
Q 022184 3 GGGTVTCGSWIKR----PENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDES-----EGDPMTIAVN- 72 (301)
Q Consensus 3 ~~~~v~~~~w~~~----~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~- 72 (301)
...+|++++|+++ .....++++|+ .++.+++|++...... .......+..| ...|.+++|+
T Consensus 61 h~~~v~~~~~~~~~~~~g~~~~~l~s~~------~dg~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~ 131 (397)
T 1sq9_A 61 HKSGLHHVDVLQAIERDAFELCLVATTS------FSGDLLFYRITREDET---KKVIFEKLDLLDSDMKKHSFWALKWGA 131 (397)
T ss_dssp CTTCEEEEEEEEEEETTTEEEEEEEEEE------TTSCEEEEEEEECTTT---CCEEEEEECCSCTTGGGSCEEEEEEEC
T ss_pred CCCcEEEEEEecccccCCccccEEEEEc------CCCCEEEEEccCCccc---ccccceeecccccccCCCcEEEEEEee
Confidence 4578999999987 21115777755 5778899998654421 00112345667 5899999999
Q ss_pred ---CCCCe-EEEEecCCcEEEEEEcC------Ccccc-----ccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEE
Q 022184 73 ---PSGDD-FVCSTTNGGCKLFEVYG------GATDI-----NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137 (301)
Q Consensus 73 ---~~~~~-l~~~~~d~~i~~w~~~~------~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 137 (301)
|++++ |++++.|+.|++||+.. .+... .+.........|...+.+++|+|++ +|++++.|+.|+
T Consensus 132 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~ 210 (397)
T 1sq9_A 132 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQ 210 (397)
T ss_dssp CC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEE
T ss_pred ccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEE
Confidence 99999 99999999999999988 44322 1111000112367889999999999 999999999999
Q ss_pred EEeCCCcceeccccc---C---CccEEEEEecCCCcEEEEEeCC---CcEEEEeCCCCceEEEEeec------------C
Q 022184 138 IMHWPSLRIILDEPK---A---HKSVLDMDFSLDSEFLATTSTD---GSARIWKTEDGVAWTFLTRN------------S 196 (301)
Q Consensus 138 v~d~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~------------~ 196 (301)
+||+++++.+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+... +
T Consensus 211 i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 211 ISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp EEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred EEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc
Confidence 999999988888877 7 8899999999999999999999 99999999999998888761 3
Q ss_pred CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee------cc---------------CCCcEEEEEcCC
Q 022184 197 DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR------LL---------------RKPASVLSISLD 255 (301)
Q Consensus 197 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~------~~---------------~~~v~~~~~s~~ 255 (301)
...+.+++|+|++++ +++++.|+.|++||+++++.+..+. .| ...|.+++|+|+
T Consensus 291 ~~~v~~~~~~~~~~~-----l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 291 SSWVMSLSFNDSGET-----LCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp SSCEEEEEECSSSSE-----EEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred CCcEEEEEECCCCCE-----EEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccc
Confidence 457999999999997 7888999999999999999988888 77 899999999999
Q ss_pred C----------CEEEEeeCCCcEEEEeCCCce
Q 022184 256 G----------KYLAMGSKDGDICVVDVKKME 277 (301)
Q Consensus 256 ~----------~~l~~~~~d~~i~i~~~~~~~ 277 (301)
+ ++|++++.||.|++|++++++
T Consensus 366 g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 366 GWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 8 799999999999999998763
No 71
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.3e-37 Score=270.72 Aligned_cols=237 Identities=19% Similarity=0.203 Sum_probs=200.6
Q ss_pred ccccccCCcceEEEECCCC-CeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCe
Q 022184 57 YVFDESEGDPMTIAVNPSG-DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (301)
Q Consensus 57 ~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (301)
..+.+|.+.|++++|+|++ ++|++++.|++|++|++........... .....|...|.+++|+|++++|++|+.|+.
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~--~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQ--RRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEE--EEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccccc--ceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 4578999999999999865 6899999999999999976543211111 112347789999999999999999999999
Q ss_pred EEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEe--ecCCCCeeEEEEccCCCcce
Q 022184 136 LRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT--RNSDEKIELCRFSKDGTKPF 213 (301)
Q Consensus 136 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~ 213 (301)
|++||+.+++....+..|...|.+++|+|++++|++++.|++|++||+.......... ..|...|.+++|+|++....
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 9999999999888888999999999999999999999999999999987554333222 13445699999999974322
Q ss_pred EEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEE
Q 022184 214 LFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL 293 (301)
Q Consensus 214 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~ 293 (301)
+++++.|+.|++||+++.+....+..|...|++++|+|++++|++++.|+.|++||+.+++.+..+. + ...|.+
T Consensus 534 ---l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--~-~~~v~~ 607 (694)
T 3dm0_A 534 ---IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE--A-NSVIHA 607 (694)
T ss_dssp ---EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB--C-SSCEEE
T ss_pred ---EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec--C-CCcEEE
Confidence 6889999999999999999888899999999999999999999999999999999999999887653 3 568999
Q ss_pred EEEccCCC
Q 022184 294 VEFCPTQR 301 (301)
Q Consensus 294 ~~~spdg~ 301 (301)
++|+|+++
T Consensus 608 ~~~sp~~~ 615 (694)
T 3dm0_A 608 LCFSPNRY 615 (694)
T ss_dssp EEECSSSS
T ss_pred EEEcCCCc
Confidence 99999974
No 72
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-36 Score=253.59 Aligned_cols=227 Identities=9% Similarity=0.043 Sum_probs=188.4
Q ss_pred cccCCcceEEEECCCCCeE-EEEecCCcEEEEEEc--CCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeE
Q 022184 60 DESEGDPMTIAVNPSGDDF-VCSTTNGGCKLFEVY--GGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHL 136 (301)
Q Consensus 60 ~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~~w~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 136 (301)
.+|.+.|.+++|+|++++| ++++.|+.|++|++. +++....+.. ..+...|.+++|+|++++|++++.+|.+
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR-----FCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-----EECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec-----ccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 3566789999999999996 888899999999998 5544222211 1355789999999999999999999999
Q ss_pred EEEeCCCcceec----ccccCCccEEEEEecCC---CcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCC
Q 022184 137 RIMHWPSLRIIL----DEPKAHKSVLDMDFSLD---SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209 (301)
Q Consensus 137 ~v~d~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 209 (301)
++|++.+++... .+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+...+...|.+++|+ ++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-ST
T ss_pred EEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CC
Confidence 999998876543 66678889999999999 99999999999999999999998887654556689999999 99
Q ss_pred CcceEEEEEEeCCcceEEEEEccCceEeeeeec-------------------------cCCCcEEEEEcCCCCEEEEee-
Q 022184 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL-------------------------LRKPASVLSISLDGKYLAMGS- 263 (301)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------------------------~~~~v~~~~~s~~~~~l~~~~- 263 (301)
++ +++++.|+.|++||+++++.+..+.. ....+..++|+|++++|++++
T Consensus 253 ~~-----l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~ 327 (450)
T 2vdu_B 253 YL-----LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE 327 (450)
T ss_dssp TE-----EEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET
T ss_pred CE-----EEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC
Confidence 87 78889999999999999987766652 235689999999999999998
Q ss_pred CCCcEEEEeC--CCc---eeeccccccccCccEEEEEEccCC
Q 022184 264 KDGDICVVDV--KKM---EINHWSKRLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 264 ~d~~i~i~~~--~~~---~~~~~~~~~~~~~~v~~~~~spdg 300 (301)
.|+.|++|++ .++ +.+..+ ..+ ..|.+++|+|++
T Consensus 328 ~d~~i~iw~~~~~~~~~l~~~~~~-~~~--~~v~~~~~~~~~ 366 (450)
T 2vdu_B 328 ATKCIIILEMSEKQKGDLALKQII-TFP--YNVISLSAHNDE 366 (450)
T ss_dssp TCSEEEEEEECSSSTTCEEEEEEE-ECS--SCEEEEEEETTE
T ss_pred CCCeEEEEEeccCCCCceeeccEe-ccC--CceEEEEecCCc
Confidence 8999999999 554 444444 333 689999999963
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-36 Score=250.09 Aligned_cols=246 Identities=12% Similarity=0.140 Sum_probs=202.5
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCC
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDA 112 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 112 (301)
.++.+++|+.+...... .....|...|.+++|+|++++|++++.||.|++||+.+++....+ ..|.
T Consensus 111 ~d~~v~lw~~~~~~~~~-------~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~ 176 (401)
T 4aez_A 111 LERNVYVWNADSGSVSA-------LAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM-------AGHQ 176 (401)
T ss_dssp ETTEEEEEETTTCCEEE-------EEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------CCCS
T ss_pred CCCeEEEeeCCCCcEeE-------eeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe-------cCCC
Confidence 56778999886543211 112238899999999999999999999999999999877643222 1477
Q ss_pred CCeeEEEEeeCCCEEEEeecCCeEEEEeCC-CcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEE
Q 022184 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWP-SLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTF 191 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 191 (301)
..|.+++| ++++|++++.||.|++||++ .......+..|...|.+++|+|++++|++++.|+.|++||+++++....
T Consensus 177 ~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 177 ARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred CceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 89999999 56799999999999999998 4555667778889999999999999999999999999999999998888
Q ss_pred EeecCCCCeeEEEEccCCCcceEEEEEEe--CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEe--eCCCc
Q 022184 192 LTRNSDEKIELCRFSKDGTKPFLFCTVQR--GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMG--SKDGD 267 (301)
Q Consensus 192 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~d~~ 267 (301)
+..+ ...+.+++|+|++..+ ++++ +.|+.|++||+++++.+..+. +...+.+++|+|++++++++ +.||.
T Consensus 255 ~~~~-~~~v~~~~~~p~~~~l----l~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~ 328 (401)
T 4aez_A 255 KTNH-NAAVKAVAWCPWQSNL----LATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNN 328 (401)
T ss_dssp ECCC-SSCCCEEEECTTSTTE----EEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCE
T ss_pred ecCC-cceEEEEEECCCCCCE----EEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCc
Confidence 8755 4579999999998863 3443 379999999999998887665 56789999999999999994 48999
Q ss_pred EEEEeCCCceeeccc-cccccCccEEEEEEccCCC
Q 022184 268 ICVVDVKKMEINHWS-KRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 268 i~i~~~~~~~~~~~~-~~~~~~~~v~~~~~spdg~ 301 (301)
|++|++.+++..... ...| ...|.+++|+|||+
T Consensus 329 i~v~~~~~~~~~~~~~~~~h-~~~v~~~~~s~dg~ 362 (401)
T 4aez_A 329 LSIWSYSSSGLTKQVDIPAH-DTRVLYSALSPDGR 362 (401)
T ss_dssp EEEEEEETTEEEEEEEEECC-SSCCCEEEECTTSS
T ss_pred EEEEecCCccceeEEEecCC-CCCEEEEEECCCCC
Confidence 999999987655442 2567 88999999999985
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-36 Score=247.70 Aligned_cols=233 Identities=13% Similarity=0.123 Sum_probs=192.8
Q ss_pred ccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC--CCEEEEeecCC
Q 022184 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDG 134 (301)
Q Consensus 57 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg 134 (301)
..+.+|.+.|.+++|+|++++|++++.|+.|++|++........ .....|...|.+++|+|+ +++|++++.||
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-----DTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE-----EEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceee-----eEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 45789999999999999999999999999999999984432111 111247789999999987 99999999999
Q ss_pred eEEEEeCCCcc--eecccccCCccEEEEEecCC--CcEEEEEeCCCcEEEEeCCCCce--EEEEeecCCCCeeEEEEcc-
Q 022184 135 HLRIMHWPSLR--IILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFSK- 207 (301)
Q Consensus 135 ~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~- 207 (301)
.|++||+.+++ ....+..|...|.+++|+|+ +++|++++.|+.|++||++.+.. ...+. .+...+.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPA 158 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-CCTTCEEEEEECCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-CCCCceEEEEEcCc
Confidence 99999999886 56667778889999999999 99999999999999999988743 33333 3455799999999
Q ss_pred ------------CCCcceEEEEEEeCCcceEEEEEccCce----EeeeeeccCCCcEEEEEcCC---CCEEEEeeCCCcE
Q 022184 208 ------------DGTKPFLFCTVQRGDKALLAVYDISTWN----KIGHKRLLRKPASVLSISLD---GKYLAMGSKDGDI 268 (301)
Q Consensus 208 ------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i 268 (301)
++.. +++++.|+.|++||++++. ....+..|...|.+++|+|+ +++|++++.||.|
T Consensus 159 ~~~~~~~~~~~~~~~~-----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i 233 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRK-----FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 233 (379)
T ss_dssp C----------CTTCE-----EEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred cccccccccCCCCCCE-----EEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEE
Confidence 5776 7888999999999998654 44566778899999999999 8999999999999
Q ss_pred EEEeCCCce----eeccccccccCccEEEEEEccCCC
Q 022184 269 CVVDVKKME----INHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 269 ~i~~~~~~~----~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++||+.+++ ........| ...|++++|+|||+
T Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~ 269 (379)
T 3jrp_A 234 IIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSLSGN 269 (379)
T ss_dssp EEEEESSTTSCCEEEESSSSCC-SSCEEEEEECSSSC
T ss_pred EEEeCCCCCccceeeeeccccC-CCcEEEEEEcCCCC
Confidence 999999863 122222346 78999999999985
No 75
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.3e-37 Score=251.76 Aligned_cols=247 Identities=13% Similarity=0.115 Sum_probs=200.3
Q ss_pred CCceeEEEeeeecCCC-ccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC-CCCeEEE
Q 022184 3 GGGTVTCGSWIKRPEN-VNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~-~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~ 80 (301)
....|++++|+|+... +.++++|+ .++.+++|++.... ....+.+|...|.+++|+| ++++|++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~------~dg~i~v~d~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAG------SRGIIRIINPITMQ--------CIKHYVGHGNAINELKFHPRDPNLLLS 133 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEE------TTCEEEEECTTTCC--------EEEEEESCCSCEEEEEECSSCTTEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEec------CCCEEEEEEchhce--------EeeeecCCCCcEEEEEECCCCCCEEEE
Confidence 3477999999988543 45777765 66778998876432 1334678999999999999 9999999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccccc--------
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK-------- 152 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-------- 152 (301)
++.|+.|++||+.+++....+. ....|...|.+++|+|++++|++++.||.|++||+++++....+..
T Consensus 134 ~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 209 (366)
T 3k26_A 134 VSKDHALRLWNIQTDTLVAIFG----GVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNK 209 (366)
T ss_dssp EETTSCEEEEETTTTEEEEEEC----STTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGG
T ss_pred EeCCCeEEEEEeecCeEEEEec----ccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCC
Confidence 9999999999998776432221 1134778999999999999999999999999999998766544433
Q ss_pred --------------------CCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCce--------------EEEEeecCCC
Q 022184 153 --------------------AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA--------------WTFLTRNSDE 198 (301)
Q Consensus 153 --------------------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--------------~~~~~~~~~~ 198 (301)
|...|.+++|+ +++|++++.|+.|++||++++.. +..+..+ ..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 286 (366)
T 3k26_A 210 TNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYS-QC 286 (366)
T ss_dssp CSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECS-SC
T ss_pred CcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccccc-CC
Confidence 77899999999 77999999999999999987644 5555554 44
Q ss_pred CeeEEEEccC--CCcceEEEEEEeCCcceEEEEEccCceEe----eeeecc--CCCcEEEEEcCCCCEEEEeeCCCcEEE
Q 022184 199 KIELCRFSKD--GTKPFLFCTVQRGDKALLAVYDISTWNKI----GHKRLL--RKPASVLSISLDGKYLAMGSKDGDICV 270 (301)
Q Consensus 199 ~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~i 270 (301)
.+.+++|+|+ ++. +++++.|+.|++||+++++.. ..+..| ...|++++|+|++++|++++.||.|++
T Consensus 287 ~v~~~~~s~~~~~~~-----l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 361 (366)
T 3k26_A 287 DIWYMRFSMDFWQKM-----LALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWR 361 (366)
T ss_dssp CSSCCCCEECTTSSE-----EEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cEEEEEEcCCCCCcE-----EEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEE
Confidence 6999999999 887 788999999999999987533 356666 689999999999999999999999999
Q ss_pred EeCCC
Q 022184 271 VDVKK 275 (301)
Q Consensus 271 ~~~~~ 275 (301)
||+.+
T Consensus 362 wd~~~ 366 (366)
T 3k26_A 362 WDRLR 366 (366)
T ss_dssp EEC--
T ss_pred EEecC
Confidence 99853
No 76
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-36 Score=245.87 Aligned_cols=236 Identities=12% Similarity=0.063 Sum_probs=194.1
Q ss_pred eccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee--CCCEEEEeecC
Q 022184 56 TYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVD 133 (301)
Q Consensus 56 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d 133 (301)
...+.+|.+.|++++|+|++++|++++.||.|++|++.+......... ....|...|.+++|+| ++++|++++.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSD---SWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEE---EEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecc---eeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 345689999999999999999999999999999999987653222211 1124778999999999 69999999999
Q ss_pred CeEEEEeCCCc---------ceecccccCCccEEEEEecCC--CcEEEEEeCCCcEEEEeCCCCceEEEEe---------
Q 022184 134 GHLRIMHWPSL---------RIILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVAWTFLT--------- 193 (301)
Q Consensus 134 g~i~v~d~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------- 193 (301)
|.|++||++++ +....+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+.
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 99999999876 445666778889999999999 9999999999999999998876543322
Q ss_pred ---ecCCCCeeEEEEccC---CCcceEEEEEEeCCcceEEEEEccCceE--eeeeeccCCCcEEEEEcCCC----CEEEE
Q 022184 194 ---RNSDEKIELCRFSKD---GTKPFLFCTVQRGDKALLAVYDISTWNK--IGHKRLLRKPASVLSISLDG----KYLAM 261 (301)
Q Consensus 194 ---~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~v~~~~~s~~~----~~l~~ 261 (301)
..+...+.+++|+|+ +.. +++++.++.+.+|+...++. +..+..|...|++++|+|++ ++|++
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s 235 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEK-----LAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIAT 235 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCE-----EEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEE
T ss_pred cccCCcccceeEEEeccCCCCCcE-----EEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEE
Confidence 134456899999997 665 68888899998888877664 56677888999999999998 89999
Q ss_pred eeCCCcEEEEeCCCc----------------------------------------------eeeccccccccCccEEEEE
Q 022184 262 GSKDGDICVVDVKKM----------------------------------------------EINHWSKRLHLGTSIALVE 295 (301)
Q Consensus 262 ~~~d~~i~i~~~~~~----------------------------------------------~~~~~~~~~~~~~~v~~~~ 295 (301)
++.||.|++||++.+ +.+..+ .+| ...|++++
T Consensus 236 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~~~ 313 (351)
T 3f3f_A 236 GCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH-DDH-NGEVWSVS 313 (351)
T ss_dssp EETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEE-CTT-SSCEEEEE
T ss_pred EcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE-ecc-cccEEEEE
Confidence 999999999999864 333333 567 88999999
Q ss_pred EccCCC
Q 022184 296 FCPTQR 301 (301)
Q Consensus 296 ~spdg~ 301 (301)
|+|+|+
T Consensus 314 ~s~~~~ 319 (351)
T 3f3f_A 314 WNLTGT 319 (351)
T ss_dssp ECSSSC
T ss_pred EcCCCC
Confidence 999985
No 77
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-36 Score=248.67 Aligned_cols=229 Identities=10% Similarity=0.038 Sum_probs=196.7
Q ss_pred ccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCc--cccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeE
Q 022184 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGA--TDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHL 136 (301)
Q Consensus 59 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 136 (301)
+..|.++|.+++|+|++++|++++.|+.|++||+.+++ .... ...|...|.+++|+|++++|++++.|+.|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~-------~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 76 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE-------LKEHNGQVTGVDWAPDSNRIVTCGTDRNA 76 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEE-------EECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeee-------ecCCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence 34589999999999999999999999999999998875 2111 12467899999999999999999999999
Q ss_pred EEEeCCCcceec--ccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCce---EEEEeecCCCCeeEEEEccCCCc
Q 022184 137 RIMHWPSLRIIL--DEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA---WTFLTRNSDEKIELCRFSKDGTK 211 (301)
Q Consensus 137 ~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~ 211 (301)
++||+++++... .+..+...|.+++|+|++++|++++.|+.|++||++.++. ...+...+...+.+++|+|+++.
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 999998876433 3356778999999999999999999999999999998763 34444445667999999999987
Q ss_pred ceEEEEEEeCCcceEEEEEcc------------------CceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeC
Q 022184 212 PFLFCTVQRGDKALLAVYDIS------------------TWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDV 273 (301)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~d~~------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~ 273 (301)
+++++.|+.|++||++ .++.+..+..|...+.+++|+|++++|++++.|+.|++||+
T Consensus 157 -----l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 157 -----LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp -----EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred -----EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 7888999999999953 56777778888899999999999999999999999999999
Q ss_pred CCceeeccccccccCccEEEEEEccCCC
Q 022184 274 KKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 274 ~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++++.+..+ ..| ..+|.+++|+|+|+
T Consensus 232 ~~~~~~~~~-~~~-~~~v~~~~~~~~~~ 257 (372)
T 1k8k_C 232 DKKMAVATL-ASE-TLPLLAVTFITESS 257 (372)
T ss_dssp GGTTEEEEE-ECS-SCCEEEEEEEETTE
T ss_pred CCCceeEEE-ccC-CCCeEEEEEecCCC
Confidence 999888777 567 78999999999974
No 78
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.1e-35 Score=247.58 Aligned_cols=263 Identities=12% Similarity=0.174 Sum_probs=211.6
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCc
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 86 (301)
+.+++|+++ ++||+ +.|+.|+||+..... . .....+.+|...|++++|+|+|++|++|+.|+.
T Consensus 108 ~~~l~wS~~----n~lAv-------gld~tV~lWd~~tg~--~----~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~ 170 (420)
T 4gga_A 108 LNLVDWSSG----NVLAV-------ALDNSVYLWSASSGD--I----LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 170 (420)
T ss_dssp CBCEEECTT----SEEEE-------EETTEEEEEETTTCC--E----EEEEECCSTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred ceeEEECCC----CEEEE-------EeCCEEEEEECCCCC--E----EEEEEecCCCCcEEEEEECCCCCEEEEEECCCe
Confidence 567899854 47776 356788999876432 1 113346788999999999999999999999999
Q ss_pred EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc-eecccccCCccEEEEEecCC
Q 022184 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-IILDEPKAHKSVLDMDFSLD 165 (301)
Q Consensus 87 i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~ 165 (301)
|++||+++++..... ..|...+.++++ ++.+|++|+.|+.+++||..... .+..+..|...+..+.|+|+
T Consensus 171 v~iWd~~~~~~~~~~-------~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~ 241 (420)
T 4gga_A 171 VQLWDVQQQKRLRNM-------TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD 241 (420)
T ss_dssp EEEEETTTTEEEEEE-------CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred EEEEEcCCCcEEEEE-------eCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCC
Confidence 999999887653222 236677777666 57899999999999999987644 44556778889999999999
Q ss_pred CcEEEEEeCCCcEEEEeCCCCce----EEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee
Q 022184 166 SEFLATTSTDGSARIWKTEDGVA----WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (301)
Q Consensus 166 ~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 241 (301)
++++++++.|+.+++|+..+++. +.... .+...|.+++|+|.+..++ +...++.|+.|++||+.+++....+.
T Consensus 242 g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~-~~~~~V~~~~~~p~~~~~l--a~~~gs~D~~I~iwd~~t~~~~~~~~ 318 (420)
T 4gga_A 242 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPWQSNVL--ATGGGTSDRHIRIWNVCSGACLSAVD 318 (420)
T ss_dssp SSEEEEEETTSCEEEEESSCCSSCSCCSEEEC-CCSSCEEEEEECTTCTTEE--EEEECTTTCEEEEEETTTTEEEEEEE
T ss_pred CCeeeeeeccccceEEeeccccccceeeeeec-ccCCceeeeeeCCCcccEE--EEEeecCCCEEEEEeCCccccceeec
Confidence 99999999999999999987653 23333 3455799999999988732 24567789999999999999887666
Q ss_pred ccCCCcEEEEEcCCCCEEEEee--CCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 242 LLRKPASVLSISLDGKYLAMGS--KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 242 ~~~~~v~~~~~s~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
. ...+.++.|+|+++.+++++ .|+.|+|||+.+++++..+ .+| ...|++++|+|||+
T Consensus 319 ~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l-~gH-~~~V~~l~~spdg~ 377 (420)
T 4gga_A 319 A-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KGH-TSRVLSLTMSPDGA 377 (420)
T ss_dssp C-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CCC-SSCEEEEEECTTSS
T ss_pred c-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE-cCC-CCCEEEEEEcCCCC
Confidence 5 45788999999999888765 7899999999999998887 689 99999999999985
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.6e-36 Score=251.95 Aligned_cols=289 Identities=13% Similarity=0.111 Sum_probs=217.0
Q ss_pred CceeEEEeeeecCCC-------ccEEEecCCccccCCcCceeEeeeCCC--------------ccee----eeCC-ceec
Q 022184 4 GGTVTCGSWIKRPEN-------VNLVVLGKSSRASSSPSVLEIFSFDPK--------------TTSV----YTSP-LVTY 57 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~-------~~~~~~g~~~~~~~~~~~~~i~~~~~~--------------~~~~----~~~~-~~~~ 57 (301)
.-|..|+.|.|+... ...+++|+... +..+.|.++.++.. ...+ ...+ ....
T Consensus 45 ~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~--~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 122 (430)
T 2xyi_A 45 EWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTS--DEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIE 122 (430)
T ss_dssp SSCCSCEEECSCCEECTTCSCEEEEEEEECCCS--SSCEEEEEEEEEEC--------------------------CEEEE
T ss_pred CCCceEEEECcccccccCCCcceEEEEEEEcCC--CCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEE
Confidence 357889999987631 25677877543 26678888876411 0000 0111 1224
Q ss_pred cccccCCcceEEEECCC-CCeEEEEecCCcEEEEEEcCCcccccc---ccccCCCCCCCCCeeEEEEeeCCC-EEEEeec
Q 022184 58 VFDESEGDPMTIAVNPS-GDDFVCSTTNGGCKLFEVYGGATDINL---LAKKMPPLQDAGPQKCLSFSVDGS-RFAAGGV 132 (301)
Q Consensus 58 ~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~~w~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~ 132 (301)
....|.+.|++++|+|+ +.+|++++.||.|++|++......... .........|...+.+++|+|++. +|++++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 45689999999999997 678999999999999999763111100 000011124678899999999988 9999999
Q ss_pred CCeEEEEeCCCcce-------ecccccCCccEEEEEecC-CCcEEEEEeCCCcEEEEeCCCC---ceEEEEeecCCCCee
Q 022184 133 DGHLRIMHWPSLRI-------ILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDG---VAWTFLTRNSDEKIE 201 (301)
Q Consensus 133 dg~i~v~d~~~~~~-------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~v~ 201 (301)
||.|++||+.++.. ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ +.+..+.. +...++
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~ 281 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA-HTAEVN 281 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC-CSSCEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec-CCCCeE
Confidence 99999999987332 234456778999999999 6779999999999999999987 45566654 455799
Q ss_pred EEEEccCCCcceEEEEEEeCCcceEEEEEccC-ceEeeeeeccCCCcEEEEEcCCCC-EEEEeeCCCcEEEEeCCCc---
Q 022184 202 LCRFSKDGTKPFLFCTVQRGDKALLAVYDIST-WNKIGHKRLLRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKM--- 276 (301)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~--- 276 (301)
+++|+|++.++ +++++.|+.|++||+++ ..++..+..|...|.+++|+|+++ +|++++.|+.|++||+...
T Consensus 282 ~i~~~p~~~~~----l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 282 CLSFNPYSEFI----LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp EEEECSSCTTE----EEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred EEEeCCCCCCE----EEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 99999999862 57889999999999997 456777888999999999999985 6999999999999999872
Q ss_pred -----------eeeccccccccCccEEEEEEccCCC
Q 022184 277 -----------EINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 277 -----------~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+.+... .+| ...|++++|+|+++
T Consensus 358 ~~~~~~~~~~~~~~~~~-~~h-~~~v~~~~~~p~~~ 391 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIH-GGH-TAKISDFSWNPNEP 391 (430)
T ss_dssp CCHHHHHHCCTTEEEEC-CCC-SSCEEEEEECSSST
T ss_pred cCccccccCCcceEEEc-CCC-CCCceEEEECCCCC
Confidence 333333 567 88899999999974
No 80
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.6e-36 Score=278.14 Aligned_cols=267 Identities=15% Similarity=0.170 Sum_probs=228.3
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|+|+ +.++++|+ .++.+++|+..... ....+.+|.+.|.+++|+|++++|++++
T Consensus 614 h~~~v~~~~~s~~---~~~l~s~~------~d~~i~vw~~~~~~--------~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 676 (1249)
T 3sfz_A 614 HTDAVYHACFSQD---GQRIASCG------ADKTLQVFKAETGE--------KLLDIKAHEDEVLCCAFSSDDSYIATCS 676 (1249)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSCEEEEETTTCC--------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ccccEEEEEECCC---CCEEEEEe------CCCeEEEEECCCCC--------EEEEeccCCCCEEEEEEecCCCEEEEEe
Confidence 4678999999988 67888865 67788999886543 1345679999999999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee--CCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDM 160 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 160 (301)
.|+.|++||+.+++....+ ..|...|.+++|+| ++.++++++.|+.|++||+++++....+..|...|.++
T Consensus 677 ~d~~v~vwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~ 749 (1249)
T 3sfz_A 677 ADKKVKIWDSATGKLVHTY-------DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHC 749 (1249)
T ss_dssp TTSEEEEEETTTCCEEEEE-------ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEE
T ss_pred CCCeEEEEECCCCceEEEE-------cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEE
Confidence 9999999999887653322 23678999999999 56689999999999999999999888888999999999
Q ss_pred EecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecC------------CCCeeEEEEccCCCcceEEEEEEeCCcceEEE
Q 022184 161 DFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS------------DEKIELCRFSKDGTKPFLFCTVQRGDKALLAV 228 (301)
Q Consensus 161 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 228 (301)
+|+|++++|++++.|+.|++||+++++....+.... ...+.+++|+|+++. ++.++ ++.+.+
T Consensus 750 ~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~-----l~~~~-~~~v~~ 823 (1249)
T 3sfz_A 750 RFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK-----IIVAA-KNKVLL 823 (1249)
T ss_dssp EECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE-----EEEEE-TTEEEE
T ss_pred EEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE-----EEEEc-CCcEEE
Confidence 999999999999999999999999988777664321 235889999999997 33333 689999
Q ss_pred EEccCceEeeeee-ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 229 YDISTWNKIGHKR-LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 229 ~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
||+.++..+..+. .|...+.+++|+|+++++++++.|+.|++||+.+++....+ .+| ...|++++|+|||+
T Consensus 824 ~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~h-~~~v~~v~~spdg~ 895 (1249)
T 3sfz_A 824 FDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADC-RGH-LSWVHGVMFSPDGS 895 (1249)
T ss_dssp EETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEE-CCC-SSCEEEEEECTTSS
T ss_pred EEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeec-CCC-ccceEEEEECCCCC
Confidence 9999988776655 67889999999999999999999999999999999888776 678 89999999999984
No 81
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=247.53 Aligned_cols=258 Identities=16% Similarity=0.122 Sum_probs=201.4
Q ss_pred CCceeEEEeeee-cCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCC-----ceeccccccCCcceEEEECC-CC
Q 022184 3 GGGTVTCGSWIK-RPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSP-----LVTYVFDESEGDPMTIAVNP-SG 75 (301)
Q Consensus 3 ~~~~v~~~~w~~-~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~-~~ 75 (301)
...+|+|++|+| + +.++++|+ .++.+++|+++.......... .......+|...|.+++|+| ++
T Consensus 42 h~~~v~~~~~s~~~---~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 42 HGGGINTLDIEPVE---GRYMLSGG------SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CSSCEEEEEECTTT---CCEEEEEE------TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred cCCcEEEEEEecCC---CCEEEEEc------CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 468999999997 6 67888866 677889999876442211100 00112246999999999999 77
Q ss_pred CeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC---CCEEEEeecCCeEEEEeCCCcceeccccc
Q 022184 76 DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGGVDGHLRIMHWPSLRIILDEPK 152 (301)
Q Consensus 76 ~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 152 (301)
++|++++.|+.|++||+.+++... .+.+...+.++.|+|. +.++++++.|+.|++||+++++.+..+..
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 184 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTAD--------VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG 184 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEE--------EEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC
T ss_pred cEEEEEeCCCeEEEeeCCCCccce--------eccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC
Confidence 899999999999999998876522 2235577899999984 45999999999999999999988888888
Q ss_pred CCccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCc-eEEEEe--------------ecCCCCeeEEEEccCCCcceEEE
Q 022184 153 AHKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGV-AWTFLT--------------RNSDEKIELCRFSKDGTKPFLFC 216 (301)
Q Consensus 153 ~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~-~~~~~~--------------~~~~~~v~~~~~~~~~~~~~~~~ 216 (301)
|...|.+++|+|+++ +|++++.|+.|++||++++. ....+. ..+...|.+++|+|++++
T Consensus 185 ~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----- 259 (408)
T 4a11_B 185 HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH----- 259 (408)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE-----
T ss_pred CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE-----
Confidence 889999999999998 58999999999999998765 333331 234557999999999997
Q ss_pred EEEeCCcceEEEEEccCce-----------------------------------------------EeeeeeccCCCcEE
Q 022184 217 TVQRGDKALLAVYDISTWN-----------------------------------------------KIGHKRLLRKPASV 249 (301)
Q Consensus 217 ~~~~~~~~~i~~~d~~~~~-----------------------------------------------~~~~~~~~~~~v~~ 249 (301)
+++++.|+.|++||+++++ .+..+..|...|.+
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~ 339 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDC 339 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEE
Confidence 6788888889999876543 34455668889999
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 250 LSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 250 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
++|+|++++|++++.||.|++||+.+++.+...
T Consensus 340 ~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 340 CVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 999999999999999999999999998776543
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-36 Score=245.05 Aligned_cols=232 Identities=15% Similarity=0.209 Sum_probs=200.2
Q ss_pred ceeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC
Q 022184 54 LVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (301)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (301)
.....+.+|.+.|++++|+|++++|++++.|+.|++||+.+++....+ ..|...|.+++|+|++++|++++.|
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~d 95 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL-------DGHTGTIWSIDVDCFTKYCVTGSAD 95 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE-------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh-------hhcCCcEEEEEEcCCCCEEEEEeCC
Confidence 335668899999999999999999999999999999999877653222 2367899999999999999999999
Q ss_pred CeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCC-----CcEEEEeCCCCce-----------EEEEeecCC
Q 022184 134 GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD-----GSARIWKTEDGVA-----------WTFLTRNSD 197 (301)
Q Consensus 134 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~-----------~~~~~~~~~ 197 (301)
|.|++||+.+++.+..+. +...+.+++|+|++++|++++.+ +.|++||++.... ...+..+..
T Consensus 96 g~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp TEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred CeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 999999999998877665 77899999999999999999998 9999999976542 222222211
Q ss_pred -CCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC-ceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 198 -EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST-WNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 198 -~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
..+.+++|+|+++. +++++.++.|++||+++ .+.+..+..|...+.+++|+|++++|++++.|+.|++||+++
T Consensus 175 ~~~~~~~~~~~~~~~-----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 175 LDAATVAGWSTKGKY-----IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp CCCEEEEEECGGGCE-----EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ccceeEEEEcCCCCE-----EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 26999999999997 68889999999999998 788888888999999999999999999999999999999999
Q ss_pred ceeeccccccccCccEEEEEEccCCC
Q 022184 276 MEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 276 ~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++....+. + ...+..++|+|+|+
T Consensus 250 ~~~~~~~~--~-~~~~~~~~~~~~~~ 272 (369)
T 3zwl_B 250 LQVLKKYE--T-DCPLNTAVITPLKE 272 (369)
T ss_dssp CCEEEEEE--C-SSCEEEEEECSSSS
T ss_pred Cceeeeec--C-CCCceeEEecCCCc
Confidence 98887764 5 78899999999985
No 83
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.8e-36 Score=238.86 Aligned_cols=249 Identities=13% Similarity=0.156 Sum_probs=196.3
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCc
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 86 (301)
+.+++|+++ +++|+| .|++|+||+.+... . .....+.+|...|.+++|+|++++|++|+.|++
T Consensus 28 ~~~l~WS~~----~~lAvg-------~D~tV~iWd~~tg~--~----~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~ 90 (318)
T 4ggc_A 28 LNLVDWSSG----NVLAVA-------LDNSVYLWSASSGD--I----LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 90 (318)
T ss_dssp CBCEEECTT----SEEEEE-------ETTEEEEEETTTCC--E----EEEEECCSTTCCEEEEEECTTSSEEEEEETTSE
T ss_pred ceEEEECCC----CEEEEE-------eCCEEEEEECCCCC--E----EEEEEecCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 467999965 377763 57888999876432 1 113346788999999999999999999999999
Q ss_pred EEEEEEcCCccccccccc----------------------------------cCCCCCCCCCeeEEEEeeCCCEEEEeec
Q 022184 87 CKLFEVYGGATDINLLAK----------------------------------KMPPLQDAGPQKCLSFSVDGSRFAAGGV 132 (301)
Q Consensus 87 i~~w~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 132 (301)
|++|++++++........ ......|...+..+.+++++++|++++.
T Consensus 91 v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 170 (318)
T 4ggc_A 91 VQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN 170 (318)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEec
Confidence 999999877642211100 0011235678899999999999999999
Q ss_pred CCeEEEEeCCCccee----cccccCCccEEEEEecCCCcEE---EEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEE
Q 022184 133 DGHLRIMHWPSLRII----LDEPKAHKSVLDMDFSLDSEFL---ATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRF 205 (301)
Q Consensus 133 dg~i~v~d~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l---~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 205 (301)
|+.|++||+++++.. .....+...|..++++|++..+ ++++.++.|++||.+.......... ...+..+.|
T Consensus 171 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~--~~~v~~~~~ 248 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILW 248 (318)
T ss_dssp TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEE
T ss_pred CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc--eeeeeeeee
Confidence 999999999877643 2334456789999999976633 4567889999999998887766653 345999999
Q ss_pred ccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCce
Q 022184 206 SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME 277 (301)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~ 277 (301)
+|++..++ +++++.|+.|++||+++++++..+.+|...|++++|+|++++|++|+.|++|+|||+.+.+
T Consensus 249 ~~~~~~~~---~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 249 SPHYKELI---SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp ETTTTEEE---EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred cccccceE---EEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99999732 3456689999999999999999999999999999999999999999999999999997653
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.7e-36 Score=249.10 Aligned_cols=260 Identities=14% Similarity=0.139 Sum_probs=205.4
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceee--eCCceeccccccCCcceEEEECCCCC-eEEE
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVY--TSPLVTYVFDESEGDPMTIAVNPSGD-DFVC 80 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~ 80 (301)
.++|++++|+|+ +..++++|+ .++.+++|++........ ........+.+|...|.+++|+|+++ +|++
T Consensus 128 ~~~v~~l~~~p~--~~~~lat~~------~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 128 EGEVNRARYMPQ--NACVIATKT------PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp SSCCSEEEEETT--EEEEEEEEC------SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred CCcEEEEEECCC--CCcEEEEEC------CCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 567999999964 256777765 567789999975321110 01223445789999999999999998 9999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeecCCeEEEEeCCCc---ceecccccCCcc
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSL---RIILDEPKAHKS 156 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~ 156 (301)
++.||.|++|++..................|...|.+++|+| ++.+|++++.|+.|++||++++ +....+..|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 999999999999874432221111112224778899999999 7889999999999999999876 455566678889
Q ss_pred EEEEEecCCCc-EEEEEeCCCcEEEEeCCC-CceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC-
Q 022184 157 VLDMDFSLDSE-FLATTSTDGSARIWKTED-GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST- 233 (301)
Q Consensus 157 i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~- 233 (301)
|.+++|+|+++ +|++++.|+.|++||+++ ...+..+..+ ...|.+++|+|+++.+ +++++.|+.|++||+..
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h-~~~v~~i~~sp~~~~~----l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH-KDEIFQVQWSPHNETI----LASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC-SSCEEEEEECSSCTTE----EEEEETTSCCEEEEGGGT
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC-CCCEEEEEECCCCCCE----EEEEeCCCcEEEEeCCCC
Confidence 99999999987 688999999999999998 4556666654 4579999999999752 57888999999999987
Q ss_pred -------------ceEeeeeeccCCCcEEEEEcCCCC-EEEEeeCCCcEEEEeCCCc
Q 022184 234 -------------WNKIGHKRLLRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKM 276 (301)
Q Consensus 234 -------------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~ 276 (301)
.+.+.....|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 245566677888999999999998 8999999999999999764
No 85
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.8e-35 Score=246.23 Aligned_cols=265 Identities=12% Similarity=0.157 Sum_probs=215.7
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEEC--CCCCeEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVN--PSGDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~~ 80 (301)
..++|++++|+++ . ++++|+ .|+.+++|+++... ....+.+|.+.|.+++|+ +++++|++
T Consensus 161 h~~~V~~l~~~~~---~-~l~s~s------~dg~i~vwd~~~~~--------~~~~~~~h~~~v~~l~~~~~~~~~~l~s 222 (464)
T 3v7d_B 161 HDGGVWALKYAHG---G-ILVSGS------TDRTVRVWDIKKGC--------CTHVFEGHNSTVRCLDIVEYKNIKYIVT 222 (464)
T ss_dssp CSSCEEEEEECST---T-EEEEEE------TTSCEEEEETTTTE--------EEEEECCCSSCEEEEEEEESSSCEEEEE
T ss_pred CCcCEEEEEEcCC---C-EEEEEe------CCCCEEEEECCCCc--------EEEEECCCCCccEEEEEecCCCCCEEEE
Confidence 4678999999866 3 666655 67888999886432 234577899999999998 57789999
Q ss_pred EecCCcEEEEEEcCCccccccccc----------------cCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc
Q 022184 81 STTNGGCKLFEVYGGATDINLLAK----------------KMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL 144 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~----------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~ 144 (301)
++.|+.|++||+.+.......... ......|...+.++ +++++++++++.|+.|++||++++
T Consensus 223 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~ 300 (464)
T 3v7d_B 223 GSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM 300 (464)
T ss_dssp EETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT
T ss_pred EcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999999999876542211000 00112344556655 788999999999999999999999
Q ss_pred ceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcc
Q 022184 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (301)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 224 (301)
+.+..+..|...|.+++|+|+++++++++.|+.|++||+++++.+..+..|. ..+.+++|++ .. +++++.|+
T Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~--~~-----l~s~s~dg 372 (464)
T 3v7d_B 301 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT-ALVGLLRLSD--KF-----LVSAAADG 372 (464)
T ss_dssp EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECS--SE-----EEEEETTS
T ss_pred cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCC-CcEEEEEEcC--CE-----EEEEeCCC
Confidence 9988888898999999999999999999999999999999999999887654 4799999984 44 68899999
Q ss_pred eEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEcc
Q 022184 225 LLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP 298 (301)
Q Consensus 225 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~sp 298 (301)
.|++||+++.+..... .+...+..++|+|+++++++++ ||.|++||+++++.+......| ...|.+++|++
T Consensus 373 ~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~-~~~v~~v~~~~ 443 (464)
T 3v7d_B 373 SIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKD-ADQIWSVNFKG 443 (464)
T ss_dssp EEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTT-CSEEEEEEEET
T ss_pred cEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccC-CCcEEEEEecC
Confidence 9999999987765443 3566788899999999999998 8999999999999988655677 89999999974
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.5e-35 Score=245.31 Aligned_cols=250 Identities=15% Similarity=0.191 Sum_probs=203.4
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
.+..|+|++|+|+ +.++|+|+ .|+.+++|++.... ....+.+|...+.++.++ +..|++++
T Consensus 146 ~~~~V~sv~fspd---g~~lasgs------~Dg~v~iWd~~~~~--------~~~~~~~h~~~v~~~s~~--~~~l~sgs 206 (420)
T 4gga_A 146 PGEYISSVAWIKE---GNYLAVGT------SSAEVQLWDVQQQK--------RLRNMTSHSARVGSLSWN--SYILSSGS 206 (420)
T ss_dssp TTCCEEEEEECTT---SSEEEEEE------TTSCEEEEETTTTE--------EEEEECCCSSCEEEEEEE--TTEEEEEE
T ss_pred CCCcEEEEEECCC---CCEEEEEE------CCCeEEEEEcCCCc--------EEEEEeCCCCceEEEeeC--CCEEEEEe
Confidence 3567999999988 67888876 67788999886432 134577899999998884 67999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcce----ecccccCCccEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI----ILDEPKAHKSVL 158 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~i~ 158 (301)
.|+.+++||........... ..|...+..+.|+|+++++++++.|+.+++|+..+++. +.....+...|.
T Consensus 207 ~d~~i~~~d~~~~~~~~~~~------~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~ 280 (420)
T 4gga_A 207 RSGHIHHHDVRVAEHHVATL------SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK 280 (420)
T ss_dssp TTSEEEEEETTSSSCEEEEE------ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEE
T ss_pred CCCceeEeeecccceeeEEe------cccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCcee
Confidence 99999999987655422221 23678899999999999999999999999999987653 334556778999
Q ss_pred EEEecCCCc-EEEE--EeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce
Q 022184 159 DMDFSLDSE-FLAT--TSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN 235 (301)
Q Consensus 159 ~~~~~~~~~-~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 235 (301)
+++|+|++. .+++ ++.|++|++||+++++....+..+ ..+.++.|+|+++.++ .+.+..|+.|++||+.+++
T Consensus 281 ~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv---~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 281 AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELI---SGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp EEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEE---EEECTTTCCEEEEETTTCC
T ss_pred eeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEE---EEEecCCCEEEEEECCCCc
Confidence 999999665 5554 457999999999999998888754 3589999999999732 2445689999999999999
Q ss_pred EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 236 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
++..+.+|...|++++|+|||++|++|+.|++|+|||+......+..
T Consensus 356 ~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~ 402 (420)
T 4gga_A 356 KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRR 402 (420)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchh
Confidence 99999999999999999999999999999999999999876554443
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=243.50 Aligned_cols=256 Identities=14% Similarity=0.196 Sum_probs=199.6
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEE------ECCCCC
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIA------VNPSGD 76 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~------~~~~~~ 76 (301)
...+|+|++|+|+..++.++++|+ .++.+++|++..... ....+.+|...|.++. |+|+++
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~s~~~~ 130 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGD------FGGNLHIWNLEAPEM-------PVYSVKGHKEIINAIDGIGGLGIGEGAP 130 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEE------TTSCEEEECTTSCSS-------CSEEECCCSSCEEEEEEESGGGCC-CCC
T ss_pred ccCcEEEEEEcCCCCCCceEEEec------CCCeEEEEeCCCCCc-------cEEEEEecccceEEEeeccccccCCCcc
Confidence 356899999997732346777765 667789998865431 1334678999999995 578999
Q ss_pred eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEE----EeeCCCEEEEeecCCeEEEEeCCCcceeccccc
Q 022184 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLS----FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK 152 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 152 (301)
+|++++.|+.|++||+...+........ ........+.+++ |+|++++|++++.|+.|++||+++++... ...
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~ 207 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEP--VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETN 207 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECC--CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEE
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccc--cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecC
Confidence 9999999999999999877632222111 1111245788888 78899999999999999999999888743 456
Q ss_pred CCccEEEEEecC---CCcEEEEEeCCCcEEEEeCCCCceEEEEe----ecCCCCeeEEEEccCCCcceEEEEEEeCCcce
Q 022184 153 AHKSVLDMDFSL---DSEFLATTSTDGSARIWKTEDGVAWTFLT----RNSDEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (301)
Q Consensus 153 ~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (301)
+...|.+++|+| ++++|++++.|+.|++||+++++....+. ..+...+.+++|+|+++.+ +++++.|+.
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----l~~~~~dg~ 283 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNREL----FLTAGGAGG 283 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEE----EEEEETTSE
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcE----EEEEeCCCc
Confidence 778999999999 99999999999999999998766544433 2345679999999999831 688899999
Q ss_pred EEEEEccCc-------------------eEeeeeeccCCCcEEEEEcCCCCEEE-EeeCCCcEEEEeCCCcee
Q 022184 226 LAVYDISTW-------------------NKIGHKRLLRKPASVLSISLDGKYLA-MGSKDGDICVVDVKKMEI 278 (301)
Q Consensus 226 i~~~d~~~~-------------------~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~ 278 (301)
|++||+++. +.+..+..|...|++++|+|++++|+ +++.|+.|++||+.+.+.
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 999999753 35666788899999999999999998 799999999999987654
No 88
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-36 Score=253.88 Aligned_cols=253 Identities=10% Similarity=0.033 Sum_probs=194.2
Q ss_pred CceeEEEeeeecC---CCccEEEecCCccccCCcCceeEeeeCCCcce---eeeCCceeccccccCCcceEEEECCCCCe
Q 022184 4 GGTVTCGSWIKRP---ENVNLVVLGKSSRASSSPSVLEIFSFDPKTTS---VYTSPLVTYVFDESEGDPMTIAVNPSGDD 77 (301)
Q Consensus 4 ~~~v~~~~w~~~~---~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 77 (301)
.+.|++++|+|+. .+..++|+|+ .|+++++|++...... ..........+.+|...|.+++|++++ .
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s------~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVS------QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEE------TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEe------cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 4679999999862 1245787765 6788899998654311 000111223578899999999999864 8
Q ss_pred EEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEE--EEeeCC-CEEEEeecCCeEEEEeCCCcceecccccCC
Q 022184 78 FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCL--SFSVDG-SRFAAGGVDGHLRIMHWPSLRIILDEPKAH 154 (301)
Q Consensus 78 l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 154 (301)
|++|+.||+|++||++++...... ...|...|.++ .|+|++ .+|++++.|++|++||+++++....+..|.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~------~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~ 353 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFY------DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF 353 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEE------EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC
T ss_pred EEEEeCCCEEEEEECCCCCCceEE------eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc
Confidence 999999999999999865432111 12477899999 578887 899999999999999999887766555554
Q ss_pred c--cEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEcc
Q 022184 155 K--SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS 232 (301)
Q Consensus 155 ~--~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 232 (301)
. .|.+++|+|+++.|++++.|++|++||++++.++..+..| ...|.+++|+|+++. +++++.|++|++||+.
T Consensus 354 ~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH-~~~V~sva~Sp~g~~-----l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR-ETTITAIGVSRLHPM-----VLAGSADGSLIITNAA 427 (524)
T ss_dssp SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC-SSCEEEEECCSSCCB-----CEEEETTTEEECCBSC
T ss_pred ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC-CCceEEEEeCCCCCe-----EEEEECCCEEEEEech
Confidence 3 5889999999999999999999999999999888878765 457999999999997 6889999999999853
Q ss_pred Cc--------------------------------------------eEeeeeeccCCCcEEEEEcCCC---CEEEEeeCC
Q 022184 233 TW--------------------------------------------NKIGHKRLLRKPASVLSISLDG---KYLAMGSKD 265 (301)
Q Consensus 233 ~~--------------------------------------------~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~d 265 (301)
.. ..+..+.+|...|.+++|+|++ .++|+|+.|
T Consensus 428 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~ 507 (524)
T 2j04_B 428 RRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSA 507 (524)
T ss_dssp SSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTT
T ss_pred HhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccC
Confidence 21 0112233456789999999995 499999999
Q ss_pred CcEEEEeCCC
Q 022184 266 GDICVVDVKK 275 (301)
Q Consensus 266 ~~i~i~~~~~ 275 (301)
|.|+||+++-
T Consensus 508 g~vrlw~l~~ 517 (524)
T 2j04_B 508 GLLTLEYLSL 517 (524)
T ss_dssp SEEEEEECSC
T ss_pred ceEEEEEccc
Confidence 9999999864
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.2e-35 Score=239.74 Aligned_cols=232 Identities=12% Similarity=0.116 Sum_probs=189.6
Q ss_pred eccccccCCcceEEEECCCC-CeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeecC
Q 022184 56 TYVFDESEGDPMTIAVNPSG-DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVD 133 (301)
Q Consensus 56 ~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d 133 (301)
...+.+|.+.|.+++|+|++ ++|++++.|+.|++||+.+.+..... ....|...|.+++|+| ++++|++++.|
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI-----QGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE-----CCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee-----ecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 44678999999999999999 89999999999999999876643221 2234788999999999 78999999999
Q ss_pred CeEEEEeCCCcceecccccC---CccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCC
Q 022184 134 GHLRIMHWPSLRIILDEPKA---HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGT 210 (301)
Q Consensus 134 g~i~v~d~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 210 (301)
+.|++||+++. ....+..+ ...|.+++|+|++++|++++.|+.|++||+ .++.+..+..+. ..|.+++|+|+++
T Consensus 141 ~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~-~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 141 GATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK-AKVTHAEFNPRCD 217 (383)
T ss_dssp TEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS-SCEEEEEECSSCT
T ss_pred CEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC-CcEEEEEECCCCC
Confidence 99999999863 33444333 367999999999999999999999999999 567777777654 5799999999998
Q ss_pred cceEEEEEEeCCcceEEEEEccC----ceEeeeeeccCCCcEEEEEcC-CCCEEEEeeCCCcEEEEeCCCceeecccccc
Q 022184 211 KPFLFCTVQRGDKALLAVYDIST----WNKIGHKRLLRKPASVLSISL-DGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285 (301)
Q Consensus 211 ~~~~~~~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 285 (301)
.+ +++++.|+.|++||+++ +..+..+ .|...+.+++|+| ++++|++++.|+.|++||+++++....+. .
T Consensus 218 ~~----l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~ 291 (383)
T 3ei3_B 218 WL----MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII-I 291 (383)
T ss_dssp TE----EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE-E
T ss_pred CE----EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc-c
Confidence 31 68889999999999998 5555544 6889999999999 99999999999999999999876654442 1
Q ss_pred c----------------cCccEEEEEEccCCC
Q 022184 286 H----------------LGTSIALVEFCPTQR 301 (301)
Q Consensus 286 ~----------------~~~~v~~~~~spdg~ 301 (301)
| ....+..++|+|||+
T Consensus 292 ~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~ 323 (383)
T 3ei3_B 292 HPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ 323 (383)
T ss_dssp CCBCCCTTSCCCCCEECSSSSEEEEECBCCTT
T ss_pred ccccccccccceEEeccCCCCceEEEecCCcc
Confidence 1 124556688888774
No 90
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.1e-35 Score=245.17 Aligned_cols=231 Identities=11% Similarity=0.036 Sum_probs=162.6
Q ss_pred cCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee--------CCCEEEEeecC
Q 022184 62 SEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--------DGSRFAAGGVD 133 (301)
Q Consensus 62 h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--------~~~~l~~~~~d 133 (301)
|...+....+++++.+|++++.|++|++||.+.++....... .....|.+.|.+++|+| |+++|++++.|
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~--~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVL--GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEE--CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeee--cccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 333344444455677899999999999999988764322211 22335889999999998 78999999999
Q ss_pred CeEEEEeCCCcceecccccCCccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEe-------------------
Q 022184 134 GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLT------------------- 193 (301)
Q Consensus 134 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~------------------- 193 (301)
++|+|||++++..+.....|+.++.+++|+|++. +|++++.|++|++||+++++......
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 9999999988888788888999999999999875 89999999999999999876543321
Q ss_pred -----ecCCCCeeEEEEc-cCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEE------------------
Q 022184 194 -----RNSDEKIELCRFS-KDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASV------------------ 249 (301)
Q Consensus 194 -----~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~------------------ 249 (301)
..+...+.++.|+ |+++. +++++.|+.+++||+..++....+..+...+..
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~-----l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSG-----ILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLG 320 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCE-----EEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSC
T ss_pred eeeecccccccceeeeeecCCCCE-----EEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCccee
Confidence 1233457788886 78887 788999999999999877655444443332222
Q ss_pred EEEcC--CCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 250 LSISL--DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 250 ~~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
..|+| ++.++++|+.||.|++||+.+++..... ..| ..+|.+++|+|||+
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~-~~~-~~~V~svafspdG~ 372 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP-IQL-GMPIVDFCWHQDGS 372 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE-EEC-SSCEEEEEECTTSS
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe-cCC-CCcEEEEEEcCCCC
Confidence 23333 3456778889999999999998877665 456 78999999999996
No 91
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-35 Score=262.26 Aligned_cols=249 Identities=11% Similarity=0.110 Sum_probs=203.4
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCC--CCeEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS--GDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~ 80 (301)
..++|+|++|+|+ +.++++|+ .++.+++|+........ ...+.+|.+.|.+++|+|+ +++|++
T Consensus 8 H~~~V~~l~~s~d---g~~latg~------~dg~I~vwd~~~~~~~~------~~~l~~h~~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 8 HNELIHDAVLDYY---GKRLATCS------SDKTIKIFEVEGETHKL------IDTLTGHEGPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp CCCCEEEECCCSS---SCCEEEEE------TTTEEEEEEEETTEEEE------EEEECCCSSCEEEEEECCTTSCSEEEE
T ss_pred CcceeEEEEECCC---CCeEEEEE------CCCcEEEEecCCCCCcc------ceeccCCcCceEEEEecCCCCCCEEEE
Confidence 4689999999988 56777765 67788999987543222 3457899999999999988 999999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC--CCEEEEeecCCeEEEEeCCCcce--ecccccCCcc
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRI--ILDEPKAHKS 156 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~ 156 (301)
++.||.|++||+.++..... .....|...|.+++|+|+ ++.+++|+.||.|++||++++.. ...+..|...
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~-----~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQI-----AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp EETTSCEEEEEEETTEEEEE-----EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred EeCCCeEEEEECCCCccccc-----ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc
Confidence 99999999999988752111 112237789999999998 99999999999999999987732 3345577789
Q ss_pred EEEEEecC-------------CCcEEEEEeCCCcEEEEeCCCCc----eEEEEeecCCCCeeEEEEccC---CCcceEEE
Q 022184 157 VLDMDFSL-------------DSEFLATTSTDGSARIWKTEDGV----AWTFLTRNSDEKIELCRFSKD---GTKPFLFC 216 (301)
Q Consensus 157 i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~ 216 (301)
|.+++|+| ++++|++++.||.|++||++++. ....+.. +...|.+++|+|+ +..
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~~~~----- 221 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSY----- 221 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEE-----
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC-CCCcEEEEEeccCCCCCCE-----
Confidence 99999999 58999999999999999998874 3344444 4557999999999 676
Q ss_pred EEEeCCcceEEEEEccCce-----EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCce
Q 022184 217 TVQRGDKALLAVYDISTWN-----KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME 277 (301)
Q Consensus 217 ~~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~ 277 (301)
+++++.|+.|++||+++++ .......+...+++++|+|++++|++++.||.|++|++..+.
T Consensus 222 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 7889999999999998864 233344577889999999999999999999999999998643
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.9e-35 Score=263.30 Aligned_cols=231 Identities=12% Similarity=0.131 Sum_probs=202.5
Q ss_pred eccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCe
Q 022184 56 TYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (301)
Q Consensus 56 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (301)
...+.+|.+.|.+++|+|++++|++++.||.|++||+.++.....+. .|..+|.+++|+|++++|++++.||.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~ 78 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ-------VTETPVRAGKFIARKNWIIVGSDDFR 78 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-------CCSSCEEEEEEEGGGTEEEEEETTSE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe-------cCCCcEEEEEEeCCCCEEEEEeCCCe
Confidence 34578999999999999999999999999999999998776532221 36789999999999999999999999
Q ss_pred EEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCC-ceEEEEeecCCCCeeEEEEcc-CCCcce
Q 022184 136 LRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-VAWTFLTRNSDEKIELCRFSK-DGTKPF 213 (301)
Q Consensus 136 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~ 213 (301)
|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||++++ .....+.. +...+.+++|+| ++..
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~-- 155 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-HEHFVMCVAFNPKDPST-- 155 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-CSSCEEEEEEETTEEEE--
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-CCCcEEEEEEEcCCCCE--
Confidence 999999999998888889999999999999999999999999999999987 44455544 456799999999 6765
Q ss_pred EEEEEEeCCcceEEEEEccCceEeeeeeccC-CCcEEEEEcC--CCCEEEEeeCCCcEEEEeCCCceeeccccccccCcc
Q 022184 214 LFCTVQRGDKALLAVYDISTWNKIGHKRLLR-KPASVLSISL--DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTS 290 (301)
Q Consensus 214 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 290 (301)
+++++.|+.|++||+++++....+..+. ..+..++|+| ++++|++++.||.|++||+.+++.+..+ ..| ...
T Consensus 156 ---l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~-~~~ 230 (814)
T 3mkq_A 156 ---FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL-EGH-MSN 230 (814)
T ss_dssp ---EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEE-ECC-SSC
T ss_pred ---EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE-cCC-CCC
Confidence 7888999999999998887766665554 7899999999 9999999999999999999999988776 567 889
Q ss_pred EEEEEEccCCC
Q 022184 291 IALVEFCPTQR 301 (301)
Q Consensus 291 v~~~~~spdg~ 301 (301)
|.+++|+|+|+
T Consensus 231 v~~~~~~~~~~ 241 (814)
T 3mkq_A 231 VSFAVFHPTLP 241 (814)
T ss_dssp EEEEEECSSSS
T ss_pred EEEEEEcCCCC
Confidence 99999999984
No 93
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2e-34 Score=242.97 Aligned_cols=255 Identities=15% Similarity=0.232 Sum_probs=210.7
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCc
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 86 (301)
+.|+++.+ +++++|+ .|+.+++|+..... ....+.+|.+.|.+++|+|++ .|++++.|++
T Consensus 125 ~~~~~~~~-----~~l~sgs------~dg~i~vwd~~~~~--------~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~ 184 (464)
T 3v7d_B 125 ITCLQFED-----NYVITGA------DDKMIRVYDSINKK--------FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRT 184 (464)
T ss_dssp EEEEEEET-----TEEEEEE------TTSCEEEEETTTTE--------EEEEECCCSSCEEEEEECSTT-EEEEEETTSC
T ss_pred EEEEEECC-----CEEEEEc------CCCcEEEEECCCCc--------EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCC
Confidence 56766652 4777766 67888999875432 234577999999999999988 9999999999
Q ss_pred EEEEEEcCCccccccccccCCCCCCCCCeeEEEEee--CCCEEEEeecCCeEEEEeCCCccee-----------------
Q 022184 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVDGHLRIMHWPSLRII----------------- 147 (301)
Q Consensus 87 i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~v~d~~~~~~~----------------- 147 (301)
|++||+++++....+ ..|...|.+++|++ +++++++++.|+.|++||+++++..
T Consensus 185 i~vwd~~~~~~~~~~-------~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 185 VRVWDIKKGCCTHVF-------EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp EEEEETTTTEEEEEE-------CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGG
T ss_pred EEEEECCCCcEEEEE-------CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccC
Confidence 999999887652221 23778999999995 7789999999999999999876532
Q ss_pred ------cccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeC
Q 022184 148 ------LDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221 (301)
Q Consensus 148 ------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (301)
.....|...+.++ +++++++++++.|+.|++||+++++.+..+..+. ..+.+++|+|+++. +++++
T Consensus 258 ~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~-----l~sg~ 329 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKR-----CISAS 329 (464)
T ss_dssp GCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTE-----EEEEE
T ss_pred CCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCEEEEEEcCCCCE-----EEEEe
Confidence 2344566677766 5778999999999999999999999998887654 57999999999997 78999
Q ss_pred CcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 222 DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 222 ~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.|+.|++||+++++.+..+..|...+.+++|+ +++|++++.||.|++||+.+++..... .+ ...+..++|+|+|+
T Consensus 330 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~--~~-~~~~~~~~~~~~~~ 404 (464)
T 3v7d_B 330 MDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY--HH-TNLSAITTFYVSDN 404 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE--EC-TTCCCEEEEEECSS
T ss_pred CCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee--cC-CCCccEEEEEeCCC
Confidence 99999999999999999999999999999997 579999999999999999988766554 24 66788889999874
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.1e-34 Score=252.55 Aligned_cols=269 Identities=16% Similarity=0.177 Sum_probs=220.7
Q ss_pred CCce-eEEEeeee--cCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEE
Q 022184 3 GGGT-VTCGSWIK--RPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFV 79 (301)
Q Consensus 3 ~~~~-v~~~~w~~--~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 79 (301)
...+ |+|++|+| + +.++++|+ .++.+++|++......-.........+..|...|.+++|+|++++|+
T Consensus 62 h~~~~v~~~~~sp~~~---~~~l~s~~------~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 132 (615)
T 1pgu_A 62 HGSSVVTTVKFSPIKG---SQYLCSGD------ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 132 (615)
T ss_dssp TTTSCEEEEEECSSTT---CCEEEEEE------TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred CCCceEEEEEECcCCC---CCEEEEec------CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEE
Confidence 3466 99999998 7 67888866 57788999985331000001122345678999999999999999999
Q ss_pred EEecC----CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCC-EEEEeecCCeEEEEeCCCcceecccccCC
Q 022184 80 CSTTN----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGS-RFAAGGVDGHLRIMHWPSLRIILDEPKAH 154 (301)
Q Consensus 80 ~~~~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 154 (301)
+++.+ +.|++|| .++.. .....|...|.+++|+|+++ .+++++.|+.|++||+++++.+..+..|.
T Consensus 133 ~~~~~~~~~~~v~~~d--~~~~~-------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWD--SGNSL-------GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp EEECCSSCSEEEEETT--TCCEE-------EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS
T ss_pred EeccCCCCccEEEEEE--CCCcc-------eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC
Confidence 99987 6888888 23221 11224778999999999997 79999999999999999999888888888
Q ss_pred c---cEEEEEecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEee---cCCCCeeEEEEccCCCcceEEEEEEeCCcceEE
Q 022184 155 K---SVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTR---NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227 (301)
Q Consensus 155 ~---~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (301)
. .|.+++|+|+ +++|++++.|+.|++||+++++.+..+.. .+...+.+++|+ ++.. +++++.|+.|+
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-----l~~~~~d~~i~ 277 (615)
T 1pgu_A 204 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQK-----FATVGADATIR 277 (615)
T ss_dssp CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSE-----EEEEETTSEEE
T ss_pred CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCE-----EEEEcCCCcEE
Confidence 8 8999999999 99999999999999999999999888833 456679999999 8887 78889999999
Q ss_pred EEEccCceEeeeeecc----CCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccC
Q 022184 228 VYDISTWNKIGHKRLL----RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPT 299 (301)
Q Consensus 228 ~~d~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spd 299 (301)
+||+++++.+..+..+ ...+.++.|+ +++++++++.|+.|++||+.+++.+..+ ..| ...|++++| |+
T Consensus 278 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~-~~~-~~~v~~~~~-~~ 349 (615)
T 1pgu_A 278 VWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTI-SGH-NKGITALTV-NP 349 (615)
T ss_dssp EEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEE-CCC-SSCEEEEET-TT
T ss_pred EEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEE-eCC-CCCEEEEEe-cC
Confidence 9999999888777766 3567788886 8999999999999999999998887776 567 888999988 65
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=247.21 Aligned_cols=246 Identities=9% Similarity=0.037 Sum_probs=192.0
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
-...|.+++|+|| +.++|.++ .|++++ + +.. ...+.+|...|.+++|+|+|
T Consensus 14 ~~~~v~sv~~SpD---G~~iASas------~D~TV~--d--~~~---------~~~l~gh~~~v~~V~FsPdg------- 64 (588)
T 2j04_A 14 FEDWKNNLTWARD---GTLYLTTF------PDISIG--Q--PKY---------AKDINCNSKNLFHVKEFPLE------- 64 (588)
T ss_dssp CSSSSCCEEECTT---SCEEEECS------SSEEEE--E--ECC---------CSCCSSBGGGTEEEEEECCC-------
T ss_pred hhccEEEEEECCC---CCEEEEEc------CCceee--c--ccc---------cceecCCCccEEEEEECCCC-------
Confidence 3567899999999 78999876 555666 2 221 12347899999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCc-----cE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-----SV 157 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-----~i 157 (301)
.++.+.+|+.+... .....+...|.+++|||+|++||+++.||.|++||..+ .+..+. |+. .+
T Consensus 65 ~~~~~~~~~~~~~~---------~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv 132 (588)
T 2j04_A 65 FENKLDFELAQQNG---------LLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTY 132 (588)
T ss_dssp CCCTTTTSCCCSSC---------SSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCE
T ss_pred CcceEEEEeCCCce---------EeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccE
Confidence 56666666543322 12223568899999999999999999999999999544 444444 544 49
Q ss_pred EEEEecCCCcEEEEEeCCCcEEEEeCCCCce-------EEEEe---ecCCCCeeEEEEccCCCcceEEEEEEeCCcceEE
Q 022184 158 LDMDFSLDSEFLATTSTDGSARIWKTEDGVA-------WTFLT---RNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227 (301)
Q Consensus 158 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-------~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (301)
.+++|+|||++|++++.||+|++||+.++.. +..+. ..|...|.+++|+|+| . ++++.|+.|+
T Consensus 133 ~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-L------aass~D~tVr 205 (588)
T 2j04_A 133 HCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-L------VAALSNNSVF 205 (588)
T ss_dssp EEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-E------EEEETTCCEE
T ss_pred EEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-E------EEEeCCCeEE
Confidence 9999999999999999999999999998753 56653 2345689999999998 4 5667799999
Q ss_pred EEEccCceEe---eee-eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEE--ccCCC
Q 022184 228 VYDISTWNKI---GHK-RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF--CPTQR 301 (301)
Q Consensus 228 ~~d~~~~~~~---~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~--spdg~ 301 (301)
+||+.+.+.. ..+ ..|...|.+++|+ |+.||+++ ++.|++||+.+++..... .+| ...|.+++| +|||+
T Consensus 206 lWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~-~gh-~~~V~~va~~~s~d~~ 280 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLK-TGS-LENFHIIPLNHEKEST 280 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEE-CSC-CSCCCEEEETTCSSCE
T ss_pred EEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEE-cCC-CceEEEEEeeeCCCCC
Confidence 9999887632 344 3677899999999 68899887 699999999998875443 368 899999999 99873
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.5e-35 Score=244.35 Aligned_cols=254 Identities=14% Similarity=0.043 Sum_probs=187.8
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
..++|+|++|+|. +..++++|+ .|+++++|++....... ......+...+.+++|+|++++|++++
T Consensus 163 H~~~V~~l~f~p~--~~~~l~s~s------~D~~v~iwd~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~g~ 228 (435)
T 4e54_B 163 AGGSITGLKFNPL--NTNQFYASS------MEGTTRLQDFKGNILRV------FASSDTINIWFCSLDVSASSRMVVTGD 228 (435)
T ss_dssp SSCCCCEEEECSS--CTTEEEEEC------SSSCEEEEETTSCEEEE------EECCSSCSCCCCCEEEETTTTEEEEEC
T ss_pred CCCCEEEEEEeCC--CCCEEEEEe------CCCEEEEeeccCCceeE------EeccCCCCccEEEEEECCCCCEEEEEe
Confidence 4678999999963 256777765 67888999886432111 112234456788999999999999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCC-EEEEeecCCeEEEEeCCCcceecc---cccCCccEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGS-RFAAGGVDGHLRIMHWPSLRIILD---EPKAHKSVL 158 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~v~d~~~~~~~~~---~~~~~~~i~ 158 (301)
.||.|++||++.... .....|...|.+++|+|++. +|++++.|+.|++||+++.+.... ...|...|+
T Consensus 229 ~dg~i~~wd~~~~~~--------~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~ 300 (435)
T 4e54_B 229 NVGNVILLNMDGKEL--------WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVN 300 (435)
T ss_dssp SSSBEEEEESSSCBC--------CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEE
T ss_pred CCCcEeeeccCccee--------EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccc
Confidence 999999999875432 22334778999999999876 688999999999999987664333 346778999
Q ss_pred EEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCC-----CeeEEEEccCCCcceEE-------EEEEeCCcceE
Q 022184 159 DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDE-----KIELCRFSKDGTKPFLF-------CTVQRGDKALL 226 (301)
Q Consensus 159 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~-------~~~~~~~~~~i 226 (301)
+++|+|++++|++++.|+.|++||++++.....+..+... .+....|+|++..+... .+..+..++.|
T Consensus 301 ~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i 380 (435)
T 4e54_B 301 AACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTI 380 (435)
T ss_dssp ECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCE
T ss_pred ceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEE
Confidence 9999999999999999999999999998887776543221 13345666666541100 01223345689
Q ss_pred EEEEccCceEeeeee-ccCCCcEEE-EEcCCCCEEEEeeCCCcEEEEeCCCceee
Q 022184 227 AVYDISTWNKIGHKR-LLRKPASVL-SISLDGKYLAMGSKDGDICVVDVKKMEIN 279 (301)
Q Consensus 227 ~~~d~~~~~~~~~~~-~~~~~v~~~-~~s~~~~~l~~~~~d~~i~i~~~~~~~~~ 279 (301)
++||..+++.+..+. .|...|.++ +|+|+|++|++|+ |+.|+||++++++..
T Consensus 381 ~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 381 DVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp EEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 999999998876654 566778877 6999999999876 789999999988653
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.3e-34 Score=250.53 Aligned_cols=272 Identities=14% Similarity=0.059 Sum_probs=218.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCc-ceEEEECC--CCCeEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGD-PMTIAVNP--SGDDFV 79 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~--~~~~l~ 79 (301)
..+.|++++|+|+ ++++++++ ++.+.+|+++.... .......+.+|.+. |.+++|+| ++++|+
T Consensus 17 ~~~~v~~~~~spd---g~~l~~~~-------~~~v~v~~~~~~~~----~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~ 82 (615)
T 1pgu_A 17 QRNFTTHLSYDPT---TNAIAYPC-------GKSAFVRCLDDGDS----KVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC 82 (615)
T ss_dssp CTTCCCCCEEETT---TTEEEEEE-------TTEEEEEECCSSCC----SSCSEEEECTTTTSCEEEEEECSSTTCCEEE
T ss_pred ccCceeEEEECCC---CCEEEEec-------CCeEEEEECCCCCC----ccccceEEecCCCceEEEEEECcCCCCCEEE
Confidence 3578999999988 66777754 45678998874311 01224567899999 99999999 999999
Q ss_pred EEecCCcEEEEEEcCCccccccccc-cCCCCCCCCCeeEEEEeeCCCEEEEeecC----CeEEEEeCCCcceecccccCC
Q 022184 80 CSTTNGGCKLFEVYGGATDINLLAK-KMPPLQDAGPQKCLSFSVDGSRFAAGGVD----GHLRIMHWPSLRIILDEPKAH 154 (301)
Q Consensus 80 ~~~~d~~i~~w~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~v~d~~~~~~~~~~~~~~ 154 (301)
+++.||.|++||+.++......... ......|...|.+++|+|++++|++++.+ +.|++|| .++....+..|.
T Consensus 83 s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~ 160 (615)
T 1pgu_A 83 SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHS 160 (615)
T ss_dssp EEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCS
T ss_pred EecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCC
Confidence 9999999999999754110000000 01111367889999999999999999987 6888888 566677788888
Q ss_pred ccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEeecCCC--CeeEEEEccC-CCcceEEEEEEeCCcceEEEEE
Q 022184 155 KSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDE--KIELCRFSKD-GTKPFLFCTVQRGDKALLAVYD 230 (301)
Q Consensus 155 ~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~d 230 (301)
..|.+++|+|+++ .+++++.|+.|++||+++++.+..+..+... .+.+++|+|+ ++. +++++.|+.|++||
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----l~~~~~dg~i~vwd 235 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEF-----VITVGSDRKISCFD 235 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCE-----EEEEETTCCEEEEE
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCE-----EEEEeCCCeEEEEE
Confidence 9999999999998 8999999999999999999998888765431 6999999999 887 78889999999999
Q ss_pred ccCceEeeee-e---ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccccc---ccCccEEEEEEc
Q 022184 231 ISTWNKIGHK-R---LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL---HLGTSIALVEFC 297 (301)
Q Consensus 231 ~~~~~~~~~~-~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~---~~~~~v~~~~~s 297 (301)
+++++.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++.+..+... + ...+.++.|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 307 (615)
T 1pgu_A 236 GKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL-GNQQVGVVAT 307 (615)
T ss_dssp TTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG-GGCEEEEEEE
T ss_pred CCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcc-cCceeEEEeC
Confidence 9999988877 5 788999999999 9999999999999999999999877765321 2 3567777774
No 98
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4e-36 Score=280.69 Aligned_cols=262 Identities=17% Similarity=0.184 Sum_probs=225.6
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..++.|++|+|+ +.++++|+ .++.+.+|+...... ...+.+|...|.+++|+|++++|++++.
T Consensus 961 ~~~i~~~~~sp~---g~~l~~g~------~~g~i~i~d~~~~~~--------~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 1023 (1249)
T 3sfz_A 961 EAQVSCCCLSPH---LEYVAFGD------EDGAIKIIELPNNRV--------FSSGVGHKKAVRHIQFTADGKTLISSSE 1023 (1249)
T ss_dssp CSCEEEEEECTT---SSEEEEEE------TTSCCEEEETTTTSC--------EEECCCCSSCCCCEEECSSSSCEEEECS
T ss_pred cCcEEEEEEcCC---CCEEEEEc------CCCCEEEEEcCCCce--------eeecccCCCceEEEEECCCCCEEEEEcC
Confidence 467999999988 67888876 566778988764331 2346789999999999999999999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEec
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 163 (301)
|+.|++|++.+++. .....|...+.++.|+|++ .+++++.|+.|++||+.+++....+..|...|.+++|+
T Consensus 1024 dg~i~vwd~~~~~~--------~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s 1094 (1249)
T 3sfz_A 1024 DSVIQVWNWQTGDY--------VFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAIS 1094 (1249)
T ss_dssp SSBEEEEETTTTEE--------ECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEEC
T ss_pred CCEEEEEECCCCce--------EEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEEC
Confidence 99999999988764 2233577899999999966 57888999999999999999888888899999999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeee---
Q 022184 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK--- 240 (301)
Q Consensus 164 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~--- 240 (301)
|+++++++++.|+.|++||+.+++.+..+..|. ..|.+++|+|+++. +++++.|+.|++||+.+++.+..+
T Consensus 1095 ~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~-~~v~~~~~s~dg~~-----lat~~~dg~i~vwd~~~~~~~~~~~~~ 1168 (1249)
T 3sfz_A 1095 SDATKFSSTSADKTAKIWSFDLLSPLHELKGHN-GCVRCSAFSLDGIL-----LATGDDNGEIRIWNVSDGQLLHSCAPI 1168 (1249)
T ss_dssp SSSSSCEEECCSSCCCEECSSSSSCSBCCCCCS-SCEEEEEECSSSSE-----EEEEETTSCCCEEESSSSCCCCCCCCC
T ss_pred CCCCEEEEEcCCCcEEEEECCCcceeeeeccCC-CcEEEEEECCCCCE-----EEEEeCCCEEEEEECCCCceEEEeccc
Confidence 999999999999999999999998887777654 47999999999997 788999999999999998876554
Q ss_pred ------eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 241 ------RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 241 ------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
..|...|++++|+||+++|++++ |.|++||+.+++.+..+ ..| ...|++++|+|||+
T Consensus 1169 ~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~-~~~-~~~i~~~~~s~dg~ 1231 (1249)
T 3sfz_A 1169 SVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTF-YTN-GTNLKKIHVSPDFR 1231 (1249)
T ss_dssp C-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCC-CCS-SCCCCCCEECSSSC
T ss_pred cccccccccCceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeee-ecc-CCcccEEEECCCCC
Confidence 56788999999999999999886 89999999999988776 567 88899999999985
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-34 Score=227.83 Aligned_cols=243 Identities=10% Similarity=0.125 Sum_probs=200.4
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..+|.+++|+|+ ..++++|+ .++.+++|++..... ......+.+|...|.+++| ++++|++++.
T Consensus 59 ~~~v~~~~~~~~---~~~l~~~~------~dg~i~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~ 122 (313)
T 3odt_A 59 QGFLNSVCYDSE---KELLLFGG------KDTMINGVPLFATSG-----EDPLYTLIGHQGNVCSLSF--QDGVVISGSW 122 (313)
T ss_dssp SSCEEEEEEETT---TTEEEEEE------TTSCEEEEETTCCTT-----SCC-CEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred CccEEEEEECCC---CCEEEEec------CCCeEEEEEeeecCC-----CCcccchhhcccCEEEEEe--cCCEEEEEeC
Confidence 578999999987 67888766 667789998765431 1223456889999999999 5789999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeecCCeEEEEeCCCcceeccccc-CCccEEEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLRIILDEPK-AHKSVLDMD 161 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~ 161 (301)
|+.|++|| ...... ....|...+.++.|+| +++++++++.|+.|++||. .+....+.. +...+.+++
T Consensus 123 d~~i~~~d--~~~~~~-------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~ 191 (313)
T 3odt_A 123 DKTAKVWK--EGSLVY-------NLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLA 191 (313)
T ss_dssp TSEEEEEE--TTEEEE-------EEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEE
T ss_pred CCCEEEEc--CCcEEE-------ecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEE
Confidence 99999999 222211 1123678899999999 9999999999999999994 344444555 678999999
Q ss_pred ecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee
Q 022184 162 FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (301)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 241 (301)
|+|++. +++++.|+.|++||+++++.+..+..+. ..+.+++|+|++. +++++.|+.|++||+++++.+..+.
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~------l~~~~~dg~v~iwd~~~~~~~~~~~ 263 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHE-SFVYCIKLLPNGD------IVSCGEDRTVRIWSKENGSLKQVIT 263 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSC------EEEEETTSEEEEECTTTCCEEEEEE
T ss_pred EcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCC-ceEEEEEEecCCC------EEEEecCCEEEEEECCCCceeEEEe
Confidence 999998 9999999999999999999998887654 5799999999994 5788999999999999999998899
Q ss_pred ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 242 LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 242 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
.+...+.+++|+|+++ +++++.||.|++|++++++.....
T Consensus 264 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 264 LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 9999999999999998 667899999999999988766543
No 100
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=257.01 Aligned_cols=233 Identities=13% Similarity=0.115 Sum_probs=190.3
Q ss_pred ccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC--CCEEEEeecCC
Q 022184 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDG 134 (301)
Q Consensus 57 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg 134 (301)
..+.+|.+.|++++|+|++++|++++.||.|++|++.+...... .....|..+|.+++|+|+ +++|++|+.||
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~-----~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-----DTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEE-----EEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccc-----eeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 35789999999999999999999999999999999985432111 111247789999999997 99999999999
Q ss_pred eEEEEeCCCcc--eecccccCCccEEEEEecCC--CcEEEEEeCCCcEEEEeCCCCce--EEEEeecCCCCeeEEEEcc-
Q 022184 135 HLRIMHWPSLR--IILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFSK- 207 (301)
Q Consensus 135 ~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~- 207 (301)
.|++||+.+++ ....+..|...|.+++|+|+ ++++++++.||.|++||++++.. ...+. .+...+.+++|+|
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPA 156 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE-CCSSCEEEEEECCC
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee-cCCCceEEEEecCc
Confidence 99999998876 56667778889999999999 99999999999999999988733 23333 3455799999999
Q ss_pred ------------CCCcceEEEEEEeCCcceEEEEEccCc----eEeeeeeccCCCcEEEEEcCC---CCEEEEeeCCCcE
Q 022184 208 ------------DGTKPFLFCTVQRGDKALLAVYDISTW----NKIGHKRLLRKPASVLSISLD---GKYLAMGSKDGDI 268 (301)
Q Consensus 208 ------------~~~~~~~~~~~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i 268 (301)
++.. +++++.|+.|++||++++ .....+..|...|.+++|+|+ +++|++++.||.|
T Consensus 157 ~~~~~~~~~~~~d~~~-----l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 157 TIEEDGEHNGTKESRK-----FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp C---------CGGGCC-----EEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred ccccccccccCCCCCE-----EEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 4676 788999999999999876 455667788999999999999 9999999999999
Q ss_pred EEEeCCCceee----ccccccccCccEEEEEEccCCC
Q 022184 269 CVVDVKKMEIN----HWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 269 ~i~~~~~~~~~----~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++||+.+++.. ......| ...|++++|+|+|+
T Consensus 232 ~iwd~~~~~~~~~~~~~~~~~~-~~~v~~l~~spdg~ 267 (753)
T 3jro_A 232 IIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSLSGN 267 (753)
T ss_dssp EEEEESSSSSCCBCCBSSSSCC-SSCCCCEEECTTTC
T ss_pred EEecCCCCCCcceeEEeccCCC-CCceEEEEEcCCCC
Confidence 99999986421 1111346 78999999999985
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-35 Score=247.07 Aligned_cols=219 Identities=9% Similarity=0.069 Sum_probs=177.7
Q ss_pred ccc-cccCCcceEEEECC-CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC
Q 022184 57 YVF-DESEGDPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG 134 (301)
Q Consensus 57 ~~~-~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 134 (301)
..+ .+|.+.|.+++|+| ++++|++++.|++|++||+.+.+..... .......|...|.+++|+|++++|++++.||
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY--SSSLTYDCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC--SCSEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc--ceeeeccCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 345 88999999999999 9999999999999999999762211100 0011224788999999999999999999999
Q ss_pred eEEEEeCC---Ccceecccc----------c--CCccEEEEE--ecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeec-C
Q 022184 135 HLRIMHWP---SLRIILDEP----------K--AHKSVLDMD--FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRN-S 196 (301)
Q Consensus 135 ~i~v~d~~---~~~~~~~~~----------~--~~~~i~~~~--~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~ 196 (301)
.|++||+. +++...... . +...+.++. ++|++.+|++++.|+.|++||+++++.+..+..+ +
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC
Confidence 99999995 443332211 1 344566666 5678999999999999999999999999998863 4
Q ss_pred CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee-ccCCCcEEEEEc----CCCCEEEEeeCCCcEEEE
Q 022184 197 DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR-LLRKPASVLSIS----LDGKYLAMGSKDGDICVV 271 (301)
Q Consensus 197 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~s----~~~~~l~~~~~d~~i~i~ 271 (301)
...|.+++|+|++.. +++++.|+.|++||+++++.+..+. .+...|.+++|+ |++++|++++.|+.|++|
T Consensus 214 ~~~v~~~~~s~~~~~-----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 214 HGAVSSICIDEECCV-----LILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp GCCEEEEEECTTSCE-----EEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred CCceEEEEECCCCCE-----EEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 557999999999997 7899999999999999998887765 667789999665 568899999999999999
Q ss_pred eCCCceeeccc
Q 022184 272 DVKKMEINHWS 282 (301)
Q Consensus 272 ~~~~~~~~~~~ 282 (301)
|+++++.+..+
T Consensus 289 d~~~~~~~~~~ 299 (437)
T 3gre_A 289 NFVKGHCQYAF 299 (437)
T ss_dssp ETTTTEEEEEE
T ss_pred EcCCCcEEEEE
Confidence 99998876655
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.3e-35 Score=242.08 Aligned_cols=255 Identities=10% Similarity=0.120 Sum_probs=201.7
Q ss_pred CCceeEEEeeee-cCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCC-CeEEE
Q 022184 3 GGGTVTCGSWIK-RPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSG-DDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~-~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~ 80 (301)
...+|++++|+| + ..++++|+ .|+.+++|++....... ........+.+|...|.+++|+|++ ++|++
T Consensus 80 h~~~V~~~~~~p~~---~~~l~s~s------~dg~v~vw~~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 149 (402)
T 2aq5_A 80 HTAPVLDIAWCPHN---DNVIASGS------EDCTVMVWEIPDGGLVL-PLREPVITLEGHTKRVGIVAWHPTAQNVLLS 149 (402)
T ss_dssp CSSCEEEEEECTTC---TTEEEEEE------TTSEEEEEECCTTCCSS-CBCSCSEEEECCSSCEEEEEECSSBTTEEEE
T ss_pred CCCCEEEEEeCCCC---CCEEEEEe------CCCeEEEEEccCCCCcc-ccCCceEEecCCCCeEEEEEECcCCCCEEEE
Confidence 467899999997 4 67888866 67788999987653211 0112234578999999999999998 69999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccc-ccCCcc-EE
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE-PKAHKS-VL 158 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~-i~ 158 (301)
++.|+.|++||+.+++....+. ...|...|.+++|+|++++|++++.|+.|++||+++++.+..+ ..|.+. +.
T Consensus 150 ~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAVLTLG-----PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPV 224 (402)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-----TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCC
T ss_pred EcCCCEEEEEECCCCCccEEEe-----cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcce
Confidence 9999999999998876532221 1247789999999999999999999999999999999887777 566654 89
Q ss_pred EEEecCCCcEEEEE---eCCCcEEEEeCCCCce-EEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc
Q 022184 159 DMDFSLDSEFLATT---STDGSARIWKTEDGVA-WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234 (301)
Q Consensus 159 ~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 234 (301)
+++|+|++++|+++ +.|+.|++||+++++. +......+...+.+++|+|+++.+ +++++.|+.|++||+.++
T Consensus 225 ~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l----~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIV----YLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp EEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEE----EEEETTCSCEEEEEECSS
T ss_pred EEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEE----EEEEcCCCeEEEEEecCC
Confidence 99999999999999 7899999999998764 334443445569999999999972 346678999999999987
Q ss_pred eE-eeeeec--cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCcee
Q 022184 235 NK-IGHKRL--LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278 (301)
Q Consensus 235 ~~-~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~ 278 (301)
+. +..+.. +...+.+++|+|++.++++ .++.+++|++.+++.
T Consensus 301 ~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 301 APFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp TTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred CcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 73 333433 4588999999999998775 456899999987654
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=233.77 Aligned_cols=231 Identities=13% Similarity=0.118 Sum_probs=186.6
Q ss_pred cCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC-CCCeEEEEecCCcEEEEEEcCCccccccccc------cC
Q 022184 34 PSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAK------KM 106 (301)
Q Consensus 34 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~------~~ 106 (301)
+..+++|.++.... ...+.+|.+.|.+++|+| ++++|++++.||.|++||+.+.......... ..
T Consensus 22 ~~~~~v~~~~~~~~--------~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 93 (408)
T 4a11_B 22 ESTRRVLGLELNKD--------RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRD 93 (408)
T ss_dssp HHHHHHHTEEECTT--------EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTT
T ss_pred cCcceeeccccCcc--------eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccccccc
Confidence 44567777654332 234678999999999999 9999999999999999999887653332211 01
Q ss_pred CCCCCCCCeeEEEEee-CCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEecCC---CcEEEEEeCCCcEEEEe
Q 022184 107 PPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLD---SEFLATTSTDGSARIWK 182 (301)
Q Consensus 107 ~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~i~d 182 (301)
....|...|.+++|+| ++++|++++.||.|++||+.+++....+. +...+.++.|+|. +.++++++.|+.|++||
T Consensus 94 ~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 94 HPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp CTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 1123778999999999 78899999999999999999988766554 6678999999984 44999999999999999
Q ss_pred CCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce-Eeeee---------------eccCCC
Q 022184 183 TEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN-KIGHK---------------RLLRKP 246 (301)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~---------------~~~~~~ 246 (301)
+++++.+..+..+. ..+.+++|+|+++++ +++++.|+.|++||+++.. .+..+ ..|...
T Consensus 173 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 173 LKSGSCSHILQGHR-QEILAVSWSPRYDYI----LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp SSSSCCCEEECCCC-SCEEEEEECSSCTTE----EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred CCCcceeeeecCCC-CcEEEEEECCCCCcE----EEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 99999888887654 479999999999852 5788999999999998765 22222 467788
Q ss_pred cEEEEEcCCCCEEEEeeCCCcEEEEeCCCcee
Q 022184 247 ASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278 (301)
Q Consensus 247 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~ 278 (301)
|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 99999999999999999999999999987543
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-34 Score=239.23 Aligned_cols=198 Identities=14% Similarity=0.118 Sum_probs=157.9
Q ss_pred ccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEe
Q 022184 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMH 140 (301)
Q Consensus 61 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d 140 (301)
.|.+.|.+++|+|+|++||+++.||.|++|+.++ . ...... .. .-....+.+++|||||++|++|+.||+|++||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~-l~~l~~-~~-~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--M-LTNLDS-KG-NLSSRTYHCFEWNPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--E-EEECCC-SS-CSTTTCEEEEEECSSSSCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--e-eeeccC-CC-ccccccEEEEEEcCCCCEEEEEcCCCEEEEEE
Confidence 4588899999999999999999999999999543 1 110000 00 00123699999999999999999999999999
Q ss_pred CCCcce-------eccc----ccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCce---EEEEeecCCCCeeEEEEc
Q 022184 141 WPSLRI-------ILDE----PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA---WTFLTRNSDEKIELCRFS 206 (301)
Q Consensus 141 ~~~~~~-------~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~ 206 (301)
+.++.. +..+ .+|...|.+++|+||| +++++.|+.|++||+..++. ...+..++...|.+++|+
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 988752 3343 4566799999999999 88889999999999988773 345643455679999999
Q ss_pred cCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEE--cCCCCEEEEeeCCCcEEEEeCC
Q 022184 207 KDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSI--SLDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~d~~i~i~~~~ 274 (301)
+.. +++++ ++.|++||+.+++......+|...+..++| +|++..+++++.||. ++|..+
T Consensus 236 --g~~-----LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 236 --DYK-----VVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp --TTE-----EEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred --CCE-----EEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 454 56665 689999999988874444479999999999 999999999999999 999874
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.4e-33 Score=235.20 Aligned_cols=256 Identities=15% Similarity=0.223 Sum_probs=212.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|++++|+++ ++++|+ .++.+++|++.... ....+.+|...|.++.|+ ++.+++++
T Consensus 158 h~~~v~~~~~~~~-----~l~s~~------~dg~i~vwd~~~~~--------~~~~~~~h~~~v~~~~~~--~~~l~s~s 216 (445)
T 2ovr_B 158 HTGGVWSSQMRDN-----IIISGS------TDRTLKVWNAETGE--------CIHTLYGHTSTVRCMHLH--EKRVVSGS 216 (445)
T ss_dssp CSSCEEEEEEETT-----EEEEEE------TTSCEEEEETTTTE--------EEEEECCCSSCEEEEEEE--TTEEEEEE
T ss_pred CCCCEEEEEecCC-----EEEEEe------CCCeEEEEECCcCc--------EEEEECCCCCcEEEEEec--CCEEEEEe
Confidence 4578899999833 777765 67788999886432 134567899999999995 67899999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++||+.+++....+ ..|...+.+++| +++++++++.||.|++||+++++.+..+..|...|.+++|
T Consensus 217 ~dg~i~~wd~~~~~~~~~~-------~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVL-------MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp TTSEEEEEESSSCCEEEEE-------ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred CCCEEEEEECCCCcEEEEE-------cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE
Confidence 9999999999877653222 236788999998 7889999999999999999999988888888899999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
+++++++++.|+.|++||+++++.+..+..+. ..+.++.++ ++. +++++.|+.|++||+++++.+..+..
T Consensus 288 --~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~--~~~-----l~~~~~dg~i~vwd~~~~~~~~~~~~ 357 (445)
T 2ovr_B 288 --DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-SLTSGMELK--DNI-----LVSGNADSTVKIWDIKTGQCLQTLQG 357 (445)
T ss_dssp --CSSEEEEEETTSCEEEEETTTCCEEEEECCCC-SCEEEEEEE--TTE-----EEEEETTSCEEEEETTTCCEEEEECS
T ss_pred --CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCc-ccEEEEEEe--CCE-----EEEEeCCCeEEEEECCCCcEEEEEcc
Confidence 78899999999999999999999998887654 457777764 454 68889999999999999988877775
Q ss_pred ---cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccc----ccccCccEEEEEEccCCC
Q 022184 243 ---LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK----RLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ---~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~----~~~~~~~v~~~~~spdg~ 301 (301)
|...|.+++|+ +++|++++.||.|++||+.+++.+..+. ..| .+.|++++|+|+|+
T Consensus 358 ~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 358 PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS-GGVVWRIRASNTKL 420 (445)
T ss_dssp TTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGG-TCEEEEEEECSSEE
T ss_pred CCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCC-CceEEEEEecCCEE
Confidence 77889999995 5799999999999999999998777652 345 78999999999873
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.3e-33 Score=236.10 Aligned_cols=250 Identities=15% Similarity=0.196 Sum_probs=207.8
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..+|+|++|. +.++++|+ .++.+++|+..... ....+.+|.+.|.+++| ++++|++++.
T Consensus 133 ~~~v~~~~~d-----~~~l~~g~------~dg~i~iwd~~~~~--------~~~~~~~h~~~v~~l~~--~~~~l~sg~~ 191 (435)
T 1p22_A 133 SKGVYCLQYD-----DQKIVSGL------RDNTIKIWDKNTLE--------CKRILTGHTGSVLCLQY--DERVIITGSS 191 (435)
T ss_dssp CCCEEEEECC-----SSEEEEEE------SSSCEEEEESSSCC--------EEEEECCCSSCEEEEEC--CSSEEEEEET
T ss_pred CCcEEEEEEC-----CCEEEEEe------CCCeEEEEeCCCCe--------EEEEEcCCCCcEEEEEE--CCCEEEEEcC
Confidence 4568998883 45788766 67788999875432 23457789999999999 7889999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCccee---cccccCCccEEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRII---LDEPKAHKSVLDM 160 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~---~~~~~~~~~i~~~ 160 (301)
||.|++||+.+++....+ ..|...|.+++|+ +..+++++.||.|++||+++++.. ..+..|...|.++
T Consensus 192 dg~i~vwd~~~~~~~~~~-------~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 262 (435)
T 1p22_A 192 DSTVRVWDVNTGEMLNTL-------IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 262 (435)
T ss_dssp TSCEEEEESSSCCEEEEE-------CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEE
T ss_pred CCeEEEEECCCCcEEEEE-------cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEE
Confidence 999999999887653222 2367889999996 459999999999999999887654 4566788899999
Q ss_pred EecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeee
Q 022184 161 DFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK 240 (301)
Q Consensus 161 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 240 (301)
+| +++++++++.|+.|++||+++++.+..+..+. ..+.++.|+ +.. +++++.|+.|++||+++++.+..+
T Consensus 263 ~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~--~~~-----l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 263 DF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK-RGIACLQYR--DRL-----VVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp EE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEE--TTE-----EEEEETTSCEEEEETTTCCEEEEE
T ss_pred Ee--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC-CcEEEEEeC--CCE-----EEEEeCCCeEEEEECCCCCEEEEE
Confidence 99 68899999999999999999999999888654 469999884 454 688999999999999999999999
Q ss_pred eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCce---------eeccccccccCccEEEEEEc
Q 022184 241 RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME---------INHWSKRLHLGTSIALVEFC 297 (301)
Q Consensus 241 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~---------~~~~~~~~~~~~~v~~~~~s 297 (301)
..|...+.+++| ++++|++|+.||.|++||+.+++ .+..+ ..| ...|.+++|.
T Consensus 333 ~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~l~~~ 394 (435)
T 1p22_A 333 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL-VEH-SGRVFRLQFD 394 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE-CCC-SSCCCCEEEC
T ss_pred eCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeec-cCC-CCCeEEEEeC
Confidence 999999999999 78899999999999999997665 44444 568 8899999983
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-34 Score=255.30 Aligned_cols=224 Identities=10% Similarity=0.058 Sum_probs=184.6
Q ss_pred ccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEE
Q 022184 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 59 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 138 (301)
..+|.+.|.+++|+|++++||+|+.||+|++|+....+.. ....|...|.+++|+| +++|++++.|+.|++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~--------~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~l 83 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV--------IKLEDRSAIKEMRFVK-GIYLVVINAKDTVYV 83 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE--------EECSSCCCEEEEEEET-TTEEEEEETTCEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE--------EEcCCCCCEEEEEEcC-CCEEEEEECcCeEEE
Confidence 3589999999999999999999999999999998765431 1123678899999999 889999999999999
Q ss_pred EeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEE-E---------eecCCCCeeEEEEccC
Q 022184 139 MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTF-L---------TRNSDEKIELCRFSKD 208 (301)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~---------~~~~~~~v~~~~~~~~ 208 (301)
||+++++.+..+. +...|++++|+|++++|++++.||.|++||+++++.... + ...+..+|.+++|+|+
T Consensus 84 Wd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 84 LSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp EETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred EECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 9999988876664 667899999999999999999999999999998875311 1 1224567999999997
Q ss_pred CCcceEEEEEEeCCcceEEEEEccCceEeeeeecc------------------CCCcEEEEEcCCCCEEEEeeCCCcEEE
Q 022184 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL------------------RKPASVLSISLDGKYLAMGSKDGDICV 270 (301)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~d~~i~i 270 (301)
+... +++++.|+.| +||+++++.+..+..+ ...|.+++|+|+|++|++++.|+.|++
T Consensus 163 ~~~~----l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 163 DIGT----VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp EEEE----EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred CCCE----EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 5321 6788999999 9999999887766544 467999999999999999999999999
Q ss_pred EeCCCceeecc--cc--c-------------cccCccEEEEEEcc
Q 022184 271 VDVKKMEINHW--SK--R-------------LHLGTSIALVEFCP 298 (301)
Q Consensus 271 ~~~~~~~~~~~--~~--~-------------~~~~~~v~~~~~sp 298 (301)
||+++++.+.. +. . .| ..+|++++|+|
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~-~~~V~~v~w~~ 281 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTN-AAKISKVYWMC 281 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSC-CCEEEEEEEEE
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccc-cCCeeEEEEEe
Confidence 99999876542 11 0 13 45799999964
No 108
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=240.73 Aligned_cols=232 Identities=11% Similarity=0.063 Sum_probs=178.3
Q ss_pred ccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccc----cccccCCCCCCC------------CCeeEEEEeeCC
Q 022184 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDIN----LLAKKMPPLQDA------------GPQKCLSFSVDG 124 (301)
Q Consensus 61 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~----~~~~~~~~~~~~------------~~v~~~~~s~~~ 124 (301)
.|.+.|.+++|+|+|++|++|+.||.|++|++.+.+.... ..........|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4678999999999999999999999999999987652000 000000111244 789999999998
Q ss_pred --CEEEEeecCCeEEEEeCCCcceec---------------------------------------c-cccCCccEEEEEe
Q 022184 125 --SRFAAGGVDGHLRIMHWPSLRIIL---------------------------------------D-EPKAHKSVLDMDF 162 (301)
Q Consensus 125 --~~l~~~~~dg~i~v~d~~~~~~~~---------------------------------------~-~~~~~~~i~~~~~ 162 (301)
..|++++.|+.|++||+.+++... . ...|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 799999999999999987644310 1 2467789999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCC-CceEEEE------eecCCCCeeEEEEccCC-CcceEEEEEEeCCcceEEEEEccCc
Q 022184 163 SLDSEFLATTSTDGSARIWKTED-GVAWTFL------TRNSDEKIELCRFSKDG-TKPFLFCTVQRGDKALLAVYDISTW 234 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~------~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~d~~~~ 234 (301)
+|++++|+++ .|+.|++||++. ++....+ ...+...|.+++|+|++ .. +++++.|+.|++||++++
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-----l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT-----FVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE-----EEEEETTSCEEEEETTTC
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE-----EEEEeCCCeEEEEECcCC
Confidence 9999999998 799999999984 4444432 12345679999999998 65 788999999999999988
Q ss_pred eE----eeeeeccCC------------CcEEEEEcCCCCEEEEeeCCCcEEEEeCCC-ceeeccccccccCcc-------
Q 022184 235 NK----IGHKRLLRK------------PASVLSISLDGKYLAMGSKDGDICVVDVKK-MEINHWSKRLHLGTS------- 290 (301)
Q Consensus 235 ~~----~~~~~~~~~------------~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~------- 290 (301)
+. ...+..+.. .|.+++|+|++++|++++. +.|++||+++ ++.+..+ ..| ...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~-~~~-~~~~~~l~~~ 336 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY-QVH-EYLRSKLCSL 336 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE-ESC-GGGTTTHHHH
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee-ecc-cccccccccc
Confidence 76 566666665 8999999999999999998 9999999997 6666655 445 321
Q ss_pred --------EEEEEEccCCC
Q 022184 291 --------IALVEFCPTQR 301 (301)
Q Consensus 291 --------v~~~~~spdg~ 301 (301)
+..++|+|||+
T Consensus 337 ~~~~~i~~~~~~~~s~~~~ 355 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDS 355 (447)
T ss_dssp HHTSGGGCCCCEEECTTSS
T ss_pred ccccccccceEEEECCCCC
Confidence 33599999985
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-34 Score=232.99 Aligned_cols=233 Identities=12% Similarity=0.067 Sum_probs=175.5
Q ss_pred ccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccc
Q 022184 19 VNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD 98 (301)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~ 98 (301)
..++++|+ .|+.+++|++....... .+. ...|.++.|+|+ +++++.|++|++|+.......
T Consensus 48 ~~~l~sg~------~Dg~v~iwd~~~~~~~~--------~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~ 108 (343)
T 3lrv_A 48 KWVCMCRC------EDGALHFTQLKDSKTIT--------TIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITI 108 (343)
T ss_dssp EEEEEEEE------ETTEEEEEEESSSSCEE--------EEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEE
T ss_pred CCEEEEEC------CCCcEEEEECCCCcEEE--------EEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEE
Confidence 45677765 77888999987543211 111 456788888887 999999999999987643211
Q ss_pred ccccccc---CCCCCCCCCeeEEEEee--CCCEEEEeecCCeEEEEeCCCcceeccccc-CCccEEEEEecCCCcEEEEE
Q 022184 99 INLLAKK---MPPLQDAGPQKCLSFSV--DGSRFAAGGVDGHLRIMHWPSLRIILDEPK-AHKSVLDMDFSLDSEFLATT 172 (301)
Q Consensus 99 ~~~~~~~---~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~ 172 (301)
....... .....|..+|.+++|+| +++++++++.||.|++||+++++....... +...+.+++|+|++.+|++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 1100000 11123557899999999 999999999999999999999887554433 34579999999999999999
Q ss_pred eCCCcEEEEeCCCCceE-EEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec---cCCCc-
Q 022184 173 STDGSARIWKTEDGVAW-TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL---LRKPA- 247 (301)
Q Consensus 173 ~~d~~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~v- 247 (301)
+.|+.|++||+++++.+ ..+...|..+|.+++|+|++.+ +++++ ++.|++||+++.+.+..+.. +...+
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~-----l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 262 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYW-----MVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTG 262 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSE-----EEEEE-SSBEEEEETTSSTTCBSSCCCBC-----C
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCE-----EEEEe-CCeEEEEEcCCCCcceeeccccccccccc
Confidence 99999999999999887 6776635568999999999997 56666 44999999998876544433 22333
Q ss_pred -EEEEEcCCCCEEEEeeC-CCcEEEEeCCCc
Q 022184 248 -SVLSISLDGKYLAMGSK-DGDICVVDVKKM 276 (301)
Q Consensus 248 -~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~ 276 (301)
.+++|+|++++|++++. |+.|++|++...
T Consensus 263 ~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 263 TVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 36999999999999988 999999998654
No 110
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-33 Score=249.70 Aligned_cols=238 Identities=8% Similarity=0.040 Sum_probs=189.3
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|+|+ +.++|+|+ .|+.|++|+..... . .. ...|...|.+++|+| +++|++++
T Consensus 16 h~~~V~~lafspd---g~~lAsgs------~Dg~I~lw~~~~~~--~------~~-~~~~~~~V~~l~fsp-g~~L~S~s 76 (902)
T 2oaj_A 16 MSSKPIAAAFDFT---QNLLAIAT------VTGEVHIYGQQQVE--V------VI-KLEDRSAIKEMRFVK-GIYLVVIN 76 (902)
T ss_dssp CSSCEEEEEEETT---TTEEEEEE------TTSEEEEECSTTCE--E------EE-ECSSCCCEEEEEEET-TTEEEEEE
T ss_pred CCCCcEEEEECCC---CCEEEEEe------CCCEEEEEeCCCcE--E------EE-EcCCCCCEEEEEEcC-CCEEEEEE
Confidence 3578999999988 67899877 66778998764322 1 11 224788999999999 88999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCccee-----------cccc
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRII-----------LDEP 151 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~-----------~~~~ 151 (301)
.|++|++||+++++....+ .+...|.+++|+|++++|++|+.||.|++||+++++.. ....
T Consensus 77 ~D~~v~lWd~~~~~~~~~~--------~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 77 AKDTVYVLSLYSQKVLTTV--------FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp TTCEEEEEETTTCSEEEEE--------ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred CcCeEEEEECCCCcEEEEE--------cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 9999999999887642222 25578999999999999999999999999999887653 2345
Q ss_pred cCCccEEEEEecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEeec-----------------CCCCeeEEEEccCCCcce
Q 022184 152 KAHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRN-----------------SDEKIELCRFSKDGTKPF 213 (301)
Q Consensus 152 ~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~~~ 213 (301)
.|.++|.+++|+|+ +..|++++.|+.| +||+++++.+..+..+ +...|.+++|+|+|.+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~-- 225 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH-- 225 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE--
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE--
Confidence 67789999999996 4689999999999 9999999988887644 1346999999999997
Q ss_pred EEEEEEeCCcceEEEEEccCceEeee--e---ec-------------cCCCcEEEEEc----CCC-CEEEEeeCC-----
Q 022184 214 LFCTVQRGDKALLAVYDISTWNKIGH--K---RL-------------LRKPASVLSIS----LDG-KYLAMGSKD----- 265 (301)
Q Consensus 214 ~~~~~~~~~~~~i~~~d~~~~~~~~~--~---~~-------------~~~~v~~~~~s----~~~-~~l~~~~~d----- 265 (301)
+++++.|+.|++||+++++++.. + .. +...|.+++|+ |++ .+|++|+.|
T Consensus 226 ---lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~ 302 (902)
T 2oaj_A 226 ---IITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDN 302 (902)
T ss_dssp ---EEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSC
T ss_pred ---EEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCC
Confidence 79999999999999998877542 1 11 23469999995 443 567777665
Q ss_pred CcEEEEeC
Q 022184 266 GDICVVDV 273 (301)
Q Consensus 266 ~~i~i~~~ 273 (301)
..+.+|++
T Consensus 303 ~~v~~~~~ 310 (902)
T 2oaj_A 303 QSLTMIDL 310 (902)
T ss_dssp CCEEEEEE
T ss_pred ceEEEEec
Confidence 37889985
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.3e-32 Score=225.51 Aligned_cols=249 Identities=16% Similarity=0.242 Sum_probs=208.6
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCc
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 86 (301)
+.|+++. ++++++|+ .++.+++|++.... ....+.+|.+.|.+++|+ ++.+++++.|++
T Consensus 122 ~~~~~~~-----g~~l~sg~------~dg~i~vwd~~~~~--------~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~ 180 (445)
T 2ovr_B 122 ITCLQFC-----GNRIVSGS------DDNTLKVWSAVTGK--------CLRTLVGHTGGVWSSQMR--DNIIISGSTDRT 180 (445)
T ss_dssp EEEEEEE-----TTEEEEEE------TTSCEEEEETTTCC--------EEEECCCCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred EEEEEEc-----CCEEEEEE------CCCcEEEEECCCCc--------EEEEEcCCCCCEEEEEec--CCEEEEEeCCCe
Confidence 5666554 35787766 67888999886432 234577999999999997 679999999999
Q ss_pred EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEecCCC
Q 022184 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDS 166 (301)
Q Consensus 87 i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 166 (301)
|++||+.+++....+ ..|...|.++.|+ ++.+++++.||.|++||+++++.+..+..|...|.+++| ++
T Consensus 181 i~vwd~~~~~~~~~~-------~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~ 249 (445)
T 2ovr_B 181 LKVWNAETGECIHTL-------YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 249 (445)
T ss_dssp EEEEETTTTEEEEEE-------CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CS
T ss_pred EEEEECCcCcEEEEE-------CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CC
Confidence 999999887653222 2467889999985 668999999999999999999988888888899999999 68
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCC
Q 022184 167 EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKP 246 (301)
Q Consensus 167 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 246 (301)
+++++++.|+.|++||+++++.+..+..+. ..+.++.| ++.. +++++.|+.|++||+++++.+..+..|...
T Consensus 250 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~-----l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 321 (445)
T 2ovr_B 250 RRVVSGAYDFMVKVWDPETETCLHTLQGHT-NRVYSLQF--DGIH-----VVSGSLDTSIRVWDVETGNCIHTLTGHQSL 321 (445)
T ss_dssp SCEEEEETTSCEEEEEGGGTEEEEEECCCS-SCEEEEEE--CSSE-----EEEEETTSCEEEEETTTCCEEEEECCCCSC
T ss_pred CEEEEEcCCCEEEEEECCCCcEeEEecCCC-CceEEEEE--CCCE-----EEEEeCCCeEEEEECCCCCEEEEEcCCccc
Confidence 899999999999999999999988887654 46999999 6666 688899999999999999999888888888
Q ss_pred cEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccc--cccCccEEEEEEcc
Q 022184 247 ASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR--LHLGTSIALVEFCP 298 (301)
Q Consensus 247 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~~~v~~~~~sp 298 (301)
+.++.+ +++++++++.||.|++||+++++.+..+.. .| ...|.+++|++
T Consensus 322 v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~ 372 (445)
T 2ovr_B 322 TSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNK 372 (445)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEECS
T ss_pred EEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCC-CCCEEEEEECC
Confidence 888777 467999999999999999999988776632 36 78999999975
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-33 Score=232.61 Aligned_cols=228 Identities=10% Similarity=0.100 Sum_probs=165.4
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC--------CCCeEEEEecCCcEEEEEEcCCccccccccc
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP--------SGDDFVCSTTNGGCKLFEVYGGATDINLLAK 104 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--------~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~ 104 (301)
.|+++++|+.+...... ......+.+|.+.|++++|+| ++++||+++.|++|+|||+.++....
T Consensus 109 ~d~~v~lw~~~~~~~~~---~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~----- 180 (393)
T 4gq1_A 109 QDNTVRLIITKNETIIT---QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPIL----- 180 (393)
T ss_dssp TTSCEEEEEEETTEEEE---EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEE-----
T ss_pred CCCcEEEEECCCCccce---eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceee-----
Confidence 78889999987654221 112346789999999999998 78999999999999999998765422
Q ss_pred cCCCCCCCCCeeEEEEeeCC-CEEEEeecCCeEEEEeCCCcceecc-------------------------cccCCccEE
Q 022184 105 KMPPLQDAGPQKCLSFSVDG-SRFAAGGVDGHLRIMHWPSLRIILD-------------------------EPKAHKSVL 158 (301)
Q Consensus 105 ~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~v~d~~~~~~~~~-------------------------~~~~~~~i~ 158 (301)
....|..++.+++|+|++ ++|++++.|++|++||+++++.... ...|...+.
T Consensus 181 --~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 181 --AGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp --EEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred --eecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 223467899999999976 5799999999999999987654321 123456788
Q ss_pred EEEec-CCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCC-----------------CCeeEEEEccCCCcceEEEEEEe
Q 022184 159 DMDFS-LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD-----------------EKIELCRFSKDGTKPFLFCTVQR 220 (301)
Q Consensus 159 ~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~~~~~~ 220 (301)
++.|. |+++.|++++.|+++++||+..++....+..+.. .......|+|.....+ ++++
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~sg 335 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF---ATAH 335 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE---EEEE
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE---EEEE
Confidence 89986 7999999999999999999988766555433221 0112233444333222 5788
Q ss_pred CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCC
Q 022184 221 GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 221 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~ 274 (301)
+.|+.|++||..+++.......|..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 9999999999999988878888889999999999999999998766 6666553
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.2e-32 Score=220.36 Aligned_cols=234 Identities=10% Similarity=0.120 Sum_probs=194.8
Q ss_pred CCceeEEEeeeecCCCcc-EEEecCCccccCCcCceeEeee-CCCcceeeeCCceeccccc--cCCcceEEEECCCCCeE
Q 022184 3 GGGTVTCGSWIKRPENVN-LVVLGKSSRASSSPSVLEIFSF-DPKTTSVYTSPLVTYVFDE--SEGDPMTIAVNPSGDDF 78 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~-~~~~g~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l 78 (301)
...+|++++|+|+ +. ++++|+ .++.+++|++ ..... ..+.+ |...|.+++|+| +++|
T Consensus 55 ~~~~v~~~~~~~~---~~~~l~~~~------~dg~i~~wd~~~~~~~---------~~~~~~~~~~~v~~l~~~~-~~~l 115 (342)
T 1yfq_A 55 YKHPLLCCNFIDN---TDLQIYVGT------VQGEILKVDLIGSPSF---------QALTNNEANLGICRICKYG-DDKL 115 (342)
T ss_dssp CSSCEEEEEEEES---SSEEEEEEE------TTSCEEEECSSSSSSE---------EECBSCCCCSCEEEEEEET-TTEE
T ss_pred cCCceEEEEECCC---CCcEEEEEc------CCCeEEEEEeccCCce---------EeccccCCCCceEEEEeCC-CCEE
Confidence 3578999999988 67 777765 5677899987 54431 34567 999999999999 9999
Q ss_pred EEEecCCcEEEEEEcC---------CccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCC-cce--
Q 022184 79 VCSTTNGGCKLFEVYG---------GATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS-LRI-- 146 (301)
Q Consensus 79 ~~~~~d~~i~~w~~~~---------~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~-~~~-- 146 (301)
++++.|+.|++||+.+ .+. ...+.+...+.+++|+|++ +++++.|+.|++||+++ +..
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~ 185 (342)
T 1yfq_A 116 IAASWDGLIEVIDPRNYGDGVIAVKNLN--------SNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNG 185 (342)
T ss_dssp EEEETTSEEEEECHHHHTTBCEEEEESC--------SSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCC
T ss_pred EEEcCCCeEEEEcccccccccccccCCe--------eeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccc
Confidence 9999999999999986 332 3334477899999999887 99999999999999987 543
Q ss_pred ecccccCCccEEEEEecC-CCcEEEEEeCCCcEEEEeCCCC------ceEEEEeecCC--------CCeeEEEEccCCCc
Q 022184 147 ILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDG------VAWTFLTRNSD--------EKIELCRFSKDGTK 211 (301)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~--------~~v~~~~~~~~~~~ 211 (301)
......+...+.+++|+| +++++++++.|+.|++|+++.. +....+..+.. ..+.+++|+|++++
T Consensus 186 ~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 265 (342)
T 1yfq_A 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF 265 (342)
T ss_dssp EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC
T ss_pred eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCE
Confidence 223345667899999999 9999999999999999999877 67777765532 37999999999997
Q ss_pred ceEEEEEEeCCcceEEEEEccCceEeeeeecc-CCCcEEEEEcCCCCEEEEeeCCCc-EEEEe
Q 022184 212 PFLFCTVQRGDKALLAVYDISTWNKIGHKRLL-RKPASVLSISLDGKYLAMGSKDGD-ICVVD 272 (301)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~~-i~i~~ 272 (301)
+++++.|+.|++||+++++.+..+..| ...|.+++ |++++|++++.||. .+.+.
T Consensus 266 -----l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 266 -----LYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp -----EEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred -----EEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 788899999999999999999888888 89999999 99999999999998 55554
No 114
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.6e-32 Score=228.19 Aligned_cols=254 Identities=12% Similarity=0.185 Sum_probs=193.5
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+|+|++|. ..++++|+ .++.+++|++.... ....+.+|...|.+++|+ +..+++++
T Consensus 172 h~~~v~~l~~~-----~~~l~sg~------~dg~i~vwd~~~~~--------~~~~~~~h~~~v~~l~~~--~~~l~s~s 230 (435)
T 1p22_A 172 HTGSVLCLQYD-----ERVIITGS------SDSTVRVWDVNTGE--------MLNTLIHHCEAVLHLRFN--NGMMVTCS 230 (435)
T ss_dssp CSSCEEEEECC-----SSEEEEEE------TTSCEEEEESSSCC--------EEEEECCCCSCEEEEECC--TTEEEEEE
T ss_pred CCCcEEEEEEC-----CCEEEEEc------CCCeEEEEECCCCc--------EEEEEcCCCCcEEEEEEc--CCEEEEee
Confidence 45789999993 35788766 67788999886443 134567899999999997 45999999
Q ss_pred cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEe
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 162 (301)
.|+.|++||+.+....... .....|...|.+++| +++++++|+.||.|++||+++++.+..+..|...|.+++|
T Consensus 231 ~dg~i~vwd~~~~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~ 304 (435)
T 1p22_A 231 KDRSIAVWDMASPTDITLR----RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 304 (435)
T ss_dssp TTSCEEEEECSSSSCCEEE----EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCCcEEEEeCCCCCCceee----eEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe
Confidence 9999999999876542110 112246788999998 7889999999999999999999998888888899999999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce-------
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN------- 235 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~------- 235 (301)
+ ++++++++.|+.|++||+++++.+..+..+. ..+.+++| ++.. +++++.|+.|++||+++++
T Consensus 305 ~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~--~~~~-----l~sg~~dg~i~vwd~~~~~~~~~~~~ 374 (435)
T 1p22_A 305 R--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKR-----IVSGAYDGKIKVWDLVAALDPRAPAG 374 (435)
T ss_dssp E--TTEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEC--CSSE-----EEEEETTSCEEEEEHHHHTSTTSCTT
T ss_pred C--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCc-CcEEEEEe--cCCE-----EEEEeCCCcEEEEECCCCCCcccccc
Confidence 5 6799999999999999999999998887654 46999998 6665 7889999999999998766
Q ss_pred --EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEcc
Q 022184 236 --KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP 298 (301)
Q Consensus 236 --~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~sp 298 (301)
.+..+..|...|.+++| ++++|++++.||.|++||+.+........ . ..+..++.|.+
T Consensus 375 ~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~-~~~~~~~~~~~ 434 (435)
T 1p22_A 375 TLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP--P-RSPSRTYTYIS 434 (435)
T ss_dssp TTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------------------------
T ss_pred chheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCC--C-CCCccceeeec
Confidence 67778889999999999 78899999999999999998876655432 2 45666666654
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.1e-31 Score=222.52 Aligned_cols=267 Identities=13% Similarity=0.111 Sum_probs=209.3
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
..+.+++|+|+ ..+++++. .++.+.+|+....... . ......+.+|.+.|.+++|+|+++++++++.|
T Consensus 123 ~~~~~~~~s~~---~~~~~~~~------~~~~i~~~d~~~g~~~--~-~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d 190 (433)
T 3bws_A 123 FQPKSVRFIDN---TRLAIPLL------EDEGMDVLDINSGQTV--R-LSPPEKYKKKLGFVETISIPEHNELWVSQMQA 190 (433)
T ss_dssp SCBCCCEESSS---SEEEEEBT------TSSSEEEEETTTCCEE--E-ECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG
T ss_pred CCceEEEEeCC---CeEEEEeC------CCCeEEEEECCCCeEe--e-ecCcccccccCCceeEEEEcCCCEEEEEECCC
Confidence 44668899864 56666654 4556788876543321 1 01112456899999999999999999999999
Q ss_pred CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeCCCcceecccccCCccEEEEEec
Q 022184 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (301)
Q Consensus 85 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 163 (301)
+.|++||+++++....+. .+...+.+++|+|+++.++++ +.++.|++||+++++.+..+.. ...+.+++|+
T Consensus 191 ~~v~~~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~ 262 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVD-------LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLS 262 (433)
T ss_dssp TEEEEEETTTCCEEEEEE-------CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEEC
T ss_pred CEEEEEECCCceEEEEEc-------CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEc
Confidence 999999998765432221 355789999999999988554 4799999999998887666544 4569999999
Q ss_pred CCCcEEEEEe--------CCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce
Q 022184 164 LDSEFLATTS--------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN 235 (301)
Q Consensus 164 ~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 235 (301)
|+++++++++ .|+.|++||+++++....+... ..+..++|+|+++.+ +++++.++.|.+||+.+++
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l----~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP--GNKRHIVSGNTENKI----YVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE--ECEEEEEECSSTTEE----EEEETTTTEEEEEETTTTE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC--CCcceEEECCCCCEE----EEEecCCCEEEEEECCCCc
Confidence 9999999888 4889999999999877766432 258899999999863 4667889999999999988
Q ss_pred EeeeeeccCCCcEEEEEcCCCCEEEEeeC---------------CCcEEEEeCCCceeeccccccccCccEEEEEEccCC
Q 022184 236 KIGHKRLLRKPASVLSISLDGKYLAMGSK---------------DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 236 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 300 (301)
.+..+. +...+.+++|+|+++++++++. ||.|++||+.+++.+..+.. ...+.+++|+|||
T Consensus 337 ~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg 412 (433)
T 3bws_A 337 VQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---GNQPTGLDVSPDN 412 (433)
T ss_dssp EEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---SSSEEEEEECTTS
T ss_pred EEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---CCCCceEEEcCCC
Confidence 876665 5677899999999999988876 57999999999998877632 4579999999998
Q ss_pred C
Q 022184 301 R 301 (301)
Q Consensus 301 ~ 301 (301)
+
T Consensus 413 ~ 413 (433)
T 3bws_A 413 R 413 (433)
T ss_dssp C
T ss_pred C
Confidence 5
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=223.41 Aligned_cols=247 Identities=12% Similarity=0.053 Sum_probs=191.2
Q ss_pred ceeEEEeeeecCCCccEE-EecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 5 GTVTCGSWIKRPENVNLV-VLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~-~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..|++++|+|+ +.++ ++|+ .++.+++|++........ .......|...|.+++|+|++++|++++.
T Consensus 103 ~~v~~~~~s~d---~~~l~~~~~------~dg~v~iwd~~~~~~~~~----~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 103 SYIRNLRLTSD---ESRLIACAD------SDKSLLVFDVDKTSKNVL----KLRKRFCFSKRPNAISIAEDDTTVIIADK 169 (450)
T ss_dssp CCEEEEEECTT---SSEEEEEEG------GGTEEEEEEECSSSSSCE----EEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEEcCC---CCEEEEEEC------CCCeEEEEECcCCCCcee----eeeecccCCCCceEEEEcCCCCEEEEEeC
Confidence 36999999987 5564 6655 577889999974222111 11112357789999999999999999999
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC---CCEEEEeecCCeEEEEeCCCcceecc-cccCCccEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLD 159 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~i~~ 159 (301)
++.+++|++.+....... ......|...|.+++|+|+ +++|++++.|+.|++||+++++.+.. ..+|...|.+
T Consensus 170 ~g~v~~~~~~~~~~~~~~---~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFT---QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSS 246 (450)
T ss_dssp TSEEEEEETTSCCCSSCC---CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEE
T ss_pred CCcEEEEecCCccccccc---ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEE
Confidence 999999999876542100 0122347789999999999 99999999999999999998887766 4578889999
Q ss_pred EEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeec------------------------CCCCeeEEEEccCCCcceEE
Q 022184 160 MDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRN------------------------SDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 160 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------------------------~~~~v~~~~~~~~~~~~~~~ 215 (301)
++|+ ++++|++++.|+.|++||+++++.+..+..+ ....+..++|+|++++
T Consensus 247 ~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~---- 321 (450)
T 2vdu_B 247 ICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF---- 321 (450)
T ss_dssp EEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE----
T ss_pred EEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE----
Confidence 9999 9999999999999999999999988887632 1345889999999997
Q ss_pred EEEEeC-CcceEEEEEc--cCc---eEeeeeeccCCCcEEEEEcCCCCEEEEeeC------CCcEEEEeCC
Q 022184 216 CTVQRG-DKALLAVYDI--STW---NKIGHKRLLRKPASVLSISLDGKYLAMGSK------DGDICVVDVK 274 (301)
Q Consensus 216 ~~~~~~-~~~~i~~~d~--~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------d~~i~i~~~~ 274 (301)
+++++ .++.|++||+ .++ +.+..+..+ ..+.+++|+|++.++++++. ++.|.+|.+.
T Consensus 322 -l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 322 -VAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp -EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred -EEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 45554 8999999999 555 566666666 78999999996544444443 4557888764
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4e-32 Score=220.98 Aligned_cols=232 Identities=13% Similarity=0.110 Sum_probs=177.6
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEE-EE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFV-CS 81 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-~~ 81 (301)
...+|+|++|+|+ +.++|+|.. +.+++|+.++..... ..+...+..+++.++++.++ ++
T Consensus 18 h~~~V~~v~fs~d---g~~la~g~~-------~~~~iw~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 18 VSNPVTDYEFNQD---QSCLILSTL-------KSFEIYNVHPVAHIM----------SQEMRHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp -CCCCCEEEECTT---SSEEEEECS-------SEEEEEEETTEEEEE----------EEECSCCCEEEECTTSSEEEEEC
T ss_pred CCCceEEEEECCC---CCEEEEEcC-------CEEEEEecCCcceee----------eeecCCeEEEEEcCCCCEEEEEE
Confidence 3578999999988 678887653 335899876533211 11223588899999888774 56
Q ss_pred ecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc-ceecccccCCccEEEE
Q 022184 82 TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL-RIILDEPKAHKSVLDM 160 (301)
Q Consensus 82 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~i~~~ 160 (301)
+.|++|++||..+++.... +.+...|.+++|+++. ++++. ++.|++||+.++ +.+..+.. +...+
T Consensus 78 ~~d~~v~iWd~~~~~~~~~--------~~~~~~v~~v~~~~~~--~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~ 143 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSR--------IKVDAPVKDLFLSREF--IVVSY-GDVISVFKFGNPWKRITDDIR---FGGVC 143 (355)
T ss_dssp SSTTEEEEEETTTTEEEEE--------EECSSCEEEEEECSSE--EEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEE
T ss_pred CCccEEEEEECCCCcEEEE--------EECCCceEEEEEcCCE--EEEEE-cCEEEEEECCCCceeeEEecc---CCceE
Confidence 7789999999988765322 2355689999998763 44443 789999999987 65555543 44455
Q ss_pred EecCCCcEEEE--EeCCCcEEEEeCCCCc----------------eEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCC
Q 022184 161 DFSLDSEFLAT--TSTDGSARIWKTEDGV----------------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD 222 (301)
Q Consensus 161 ~~~~~~~~l~~--~~~d~~i~i~d~~~~~----------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 222 (301)
++++ .++++ ++.||.|++||+++++ .+..+..| ...|.+++|+|++++ +++++.
T Consensus 144 ~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~~~v~~~~~s~~g~~-----l~s~s~ 215 (355)
T 3vu4_A 144 EFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-TNPIKMVRLNRKSDM-----VATCSQ 215 (355)
T ss_dssp EEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCC-SSCEEEEEECTTSSE-----EEEEET
T ss_pred EEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc-CCceEEEEECCCCCE-----EEEEeC
Confidence 6676 56665 5789999999999765 14555554 557999999999997 799999
Q ss_pred cce-EEEEEccCceEeeeee-c-cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCc
Q 022184 223 KAL-LAVYDISTWNKIGHKR-L-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKM 276 (301)
Q Consensus 223 ~~~-i~~~d~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~ 276 (301)
|++ |++||+++++.+..+. + |...|.+++|+|++++|++++.|+.|++||++..
T Consensus 216 d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 216 DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 998 9999999999988887 4 8899999999999999999999999999999765
No 118
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.5e-31 Score=212.09 Aligned_cols=224 Identities=10% Similarity=0.100 Sum_probs=179.8
Q ss_pred ceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc
Q 022184 66 PMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR 145 (301)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~ 145 (301)
.+.|+||+++ .||+| .|++|+|||+++++....+. ...|...|.+++|+|++++|++|+.||.|++||+++++
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~-----~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQ-----MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEE-----CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEE-----ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 5789999876 66655 69999999999887533221 22467789999999999999999999999999998776
Q ss_pred eeccc-----------------------------------------ccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCC
Q 022184 146 IILDE-----------------------------------------PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE 184 (301)
Q Consensus 146 ~~~~~-----------------------------------------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 184 (301)
.+..+ ..|...+..+.+.+++++|++++.|+.|++||++
T Consensus 101 ~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 54322 2345567888999999999999999999999998
Q ss_pred CCceEE---EEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEE
Q 022184 185 DGVAWT---FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAM 261 (301)
Q Consensus 185 ~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 261 (301)
+++... .....+...+..++++|++..++ .+++++.++.|++||.+....... ..+...+..+.|+|+++.+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL--ATGGGTSDRHIRIWNVCSGACLSA-VDAHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEE--EEEECTTTCEEEEEETTTCCEEEE-EECSSCEEEEEEETTTTEEEE
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEE--EEEecCCCCEEEEEeccccccccc-ccceeeeeeeeecccccceEE
Confidence 765321 22223445799999999988632 356788999999999998776644 446678999999999988877
Q ss_pred ee--CCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 262 GS--KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 262 ~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++ .|+.|++||+++++++..+ .+| ...|++++|+|||+
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l-~gH-~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAEL-KGH-TSRVLSLTMSPDGA 297 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEE-CCC-SSCEEEEEECTTSS
T ss_pred EEEcCCCEEEEEECCCCcEEEEE-cCC-CCCEEEEEEcCCCC
Confidence 64 7899999999999998887 689 99999999999985
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-33 Score=223.76 Aligned_cols=213 Identities=10% Similarity=0.103 Sum_probs=169.7
Q ss_pred EECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC-------
Q 022184 70 AVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP------- 142 (301)
Q Consensus 70 ~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~------- 142 (301)
.+.+++.+|++|+.||.|++||+.+++....+. ...|.++.|+|+ +++++.|+.|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILD 110 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEee
Confidence 345678899999999999999999876533332 245667788887 9999999999999765
Q ss_pred --Ccceecccc-cCCccEEEEEecC--CCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEE
Q 022184 143 --SLRIILDEP-KAHKSVLDMDFSL--DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCT 217 (301)
Q Consensus 143 --~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 217 (301)
+++.+.... .|..+|.+++|+| ++++|++++.|+.|++||+++++.......++...+.+++|+|++.. +
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~-----l 185 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL-----L 185 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCE-----E
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCE-----E
Confidence 333333333 4557899999999 99999999999999999999999877665666667999999999997 7
Q ss_pred EEeCCcceEEEEEccCceEe-eeeec-cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccc--cccCccE--
Q 022184 218 VQRGDKALLAVYDISTWNKI-GHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR--LHLGTSI-- 291 (301)
Q Consensus 218 ~~~~~~~~i~~~d~~~~~~~-~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~~~v-- 291 (301)
++++.|+.|++||+++++.+ ..+.. |..+|++++|+|++.+|++++ |+.|++||+++++....+.. .| ...+
T Consensus 186 asg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~ 263 (343)
T 3lrv_A 186 ALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIP-EFKTGT 263 (343)
T ss_dssp EEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC------CC
T ss_pred EEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccc-cccccc
Confidence 88999999999999998876 66777 899999999999999999999 55999999999876554421 12 2333
Q ss_pred EEEEEccCCC
Q 022184 292 ALVEFCPTQR 301 (301)
Q Consensus 292 ~~~~~spdg~ 301 (301)
.+++|+|+|+
T Consensus 264 ~~~~~~~~g~ 273 (343)
T 3lrv_A 264 VTYDIDDSGK 273 (343)
T ss_dssp EEEEECTTSS
T ss_pred eEEEECCCCC
Confidence 3699999985
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.5e-31 Score=208.56 Aligned_cols=244 Identities=11% Similarity=0.020 Sum_probs=168.1
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe-
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST- 82 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~- 82 (301)
..||..+++.||..+.-.+++|.- ..+.++...+.+++..+.. ...-.+|...|..+ ++++.+.+++
T Consensus 86 ~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~v~sla~spd~~~~~~----~l~s~g~~~~v~~l---~~g~lv~ss~~ 153 (356)
T 2w18_A 86 EVPVLQIVPVPDVYNLVCVALGNL-----EIREIRALFCSSDDESEKQ----VLLKSGNIKAVLGL---TKRRLVSSSGT 153 (356)
T ss_dssp SSCEEEECCCTTCCSCEEEEECSS-----SEEEEEEECC------CCE----EEEEEEEEEEEEEE---TTTEEEEEESS
T ss_pred CceeEEEEEcCcccceeeeeeccc-----cccceEEEEECCCcccccc----EEEeCCCeEEEEec---CCCcEEEeccc
Confidence 458888888877654555566552 2234455556666322211 01113455555554 5665555543
Q ss_pred -cCCcEEEEEEcC-CccccccccccCCCCCCCCCeeEEEEee---CCCEEEEeecCCeEEEEeCCCcceecccccCCc--
Q 022184 83 -TNGGCKLFEVYG-GATDINLLAKKMPPLQDAGPQKCLSFSV---DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-- 155 (301)
Q Consensus 83 -~d~~i~~w~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-- 155 (301)
.|+.|++|++.. ++..... ..|...++.++|+| ++.+|++++.|++|+|||+++++.+..+..|+.
T Consensus 154 g~d~~V~~~~~s~dG~~~~s~-------~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v 226 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKENQ-------FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQ 226 (356)
T ss_dssp STTCEEEEEEECTTSCEEEEE-------EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---
T ss_pred CCCCcEEEEEECCCCceeeee-------ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcce
Confidence 499999999954 4332211 13567788999999 779999999999999999999999888876543
Q ss_pred -cEEEEEecCCCcEE------------EEEeCCCcEEEEeCCCCceEEEEe----ecCCCCeeEEEEccCCCcceEEEEE
Q 022184 156 -SVLDMDFSLDSEFL------------ATTSTDGSARIWKTEDGVAWTFLT----RNSDEKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 156 -~i~~~~~~~~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (301)
.+.+++|+|+|+++ ++|+.|++|++||..+++.+..+. ..+...+.+..+ ++.. ++
T Consensus 227 ~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~-----lA 299 (356)
T 2w18_A 227 ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHC-----AA 299 (356)
T ss_dssp CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTE-----EE
T ss_pred eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCE-----EE
Confidence 57788999999976 567889999999999998876653 122222333333 3554 68
Q ss_pred EeCCcceEEEEEccCceEeeeeeccCCCcE-EEEEcCCCCEEEEeeCCCcEEEEeC
Q 022184 219 QRGDKALLAVYDISTWNKIGHKRLLRKPAS-VLSISLDGKYLAMGSKDGDICVVDV 273 (301)
Q Consensus 219 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~d~~i~i~~~ 273 (301)
+++.|++|+|||+.+++.+..+.+|...+. .++|+|||++|++|+.|++|+|||+
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 888999999999999999999988876554 6899999999999999999999995
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.9e-30 Score=212.80 Aligned_cols=241 Identities=15% Similarity=0.185 Sum_probs=191.5
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeE-EEEecCCcEEEEEEcCCccccccccccCCCCCC
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDF-VCSTTNGGCKLFEVYGGATDINLLAKKMPPLQD 111 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~ 111 (301)
.++.+++|+.+... . ...+..| ..+.+++|+|+++++ ++++.|+.|++||+.+++....+ .+
T Consensus 10 ~d~~v~v~d~~~~~--~------~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~--------~~ 72 (391)
T 1l0q_A 10 ESDNISVIDVTSNK--V------TATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV--------PA 72 (391)
T ss_dssp TTTEEEEEETTTTE--E------EEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE--------EC
T ss_pred CCCEEEEEECCCCe--E------EEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE--------EC
Confidence 56778888775432 2 2234444 458999999999987 56668999999999877653222 23
Q ss_pred CCCeeEEEEeeCCCEEEEe-ecCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEE-EEEeCCCcEEEEeCCCCceE
Q 022184 112 AGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFL-ATTSTDGSARIWKTEDGVAW 189 (301)
Q Consensus 112 ~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~ 189 (301)
...+.+++|+|++++|+++ +.++.|++||+.+++.+..+. ++..+.+++|+|+++++ ++++.|+.|++||+++++.+
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 3489999999999987655 467999999999988766554 45678999999999977 67888999999999999988
Q ss_pred EEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEee---CCC
Q 022184 190 TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS---KDG 266 (301)
Q Consensus 190 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~d~ 266 (301)
..+..+ ..+..++|+|+++.+ +++++.++.|++||+++++....+. +...+.+++|+|++++|++++ .++
T Consensus 152 ~~~~~~--~~~~~~~~~~dg~~l----~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 152 NTVSVG--RSPKGIAVTPDGTKV----YVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFN 224 (391)
T ss_dssp EEEECC--SSEEEEEECTTSSEE----EEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCC
T ss_pred EEEecC--CCcceEEECCCCCEE----EEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCC
Confidence 877654 347999999999872 3567889999999999988776554 456789999999999999988 689
Q ss_pred cEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 267 DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 267 ~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.|++||+.+++.+..+. .+ ..+.+++|+|||+
T Consensus 225 ~v~~~d~~~~~~~~~~~-~~--~~~~~~~~s~dg~ 256 (391)
T 1l0q_A 225 TVSMIDTGTNKITARIP-VG--PDPAGIAVTPDGK 256 (391)
T ss_dssp EEEEEETTTTEEEEEEE-CC--SSEEEEEECTTSS
T ss_pred cEEEEECCCCeEEEEEe-cC--CCccEEEEccCCC
Confidence 99999999998877763 33 4588999999985
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=5.2e-30 Score=211.30 Aligned_cols=244 Identities=13% Similarity=0.119 Sum_probs=188.5
Q ss_pred CceeEEEeeeecCCCccEE-EecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 4 GGTVTCGSWIKRPENVNLV-VLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~-~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
...+.+++|+|+ +..+ +.+. .++.+++|+..... . ...+..+. .+.+++|+|++++|++++
T Consensus 31 ~~~~~~~~~s~d---g~~l~~~~~------~d~~i~v~d~~~~~--~------~~~~~~~~-~v~~~~~spdg~~l~~~~ 92 (391)
T 1l0q_A 31 GSNPMGAVISPD---GTKVYVANA------HSNDVSIIDTATNN--V------IATVPAGS-SPQGVAVSPDGKQVYVTN 92 (391)
T ss_dssp SSSEEEEEECTT---SSEEEEEEG------GGTEEEEEETTTTE--E------EEEEECSS-SEEEEEECTTSSEEEEEE
T ss_pred CCCcceEEECCC---CCEEEEECC------CCCeEEEEECCCCe--E------EEEEECCC-CccceEECCCCCEEEEEE
Confidence 456899999977 4444 4433 45677888764322 2 12233333 899999999999886554
Q ss_pred -cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEE-EEeecCCeEEEEeCCCcceecccccCCccEEEE
Q 022184 83 -TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDM 160 (301)
Q Consensus 83 -~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 160 (301)
.++.|++||+.+++.... +.+...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+.. +..+.++
T Consensus 93 ~~~~~v~v~d~~~~~~~~~--------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~ 163 (391)
T 1l0q_A 93 MASSTLSVIDTTSNTVAGT--------VKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV-GRSPKGI 163 (391)
T ss_dssp TTTTEEEEEETTTTEEEEE--------EECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-CSSEEEE
T ss_pred CCCCEEEEEECCCCeEEEE--------EeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec-CCCcceE
Confidence 569999999988765222 2234578999999999977 6777899999999999887766654 4567999
Q ss_pred EecCCCcEE-EEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeC---CcceEEEEEccCceE
Q 022184 161 DFSLDSEFL-ATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG---DKALLAVYDISTWNK 236 (301)
Q Consensus 161 ~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~d~~~~~~ 236 (301)
+|+|+++++ ++++.++.|++||+++++....+.. ...+.+++|+|++++ ++.++ .++.|++||+++++.
T Consensus 164 ~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~-----l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 164 AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTK-----AYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSE-----EEEEEECSSCCEEEEEETTTTEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec--CCCccceEECCCCCE-----EEEEecCcCCCcEEEEECCCCeE
Confidence 999999877 5777889999999999988777763 346899999999997 33333 689999999999988
Q ss_pred eeeeeccCCCcEEEEEcCCCCEE-EEeeCCCcEEEEeCCCceeeccc
Q 022184 237 IGHKRLLRKPASVLSISLDGKYL-AMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 237 ~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
+..+..+. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+
T Consensus 237 ~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 237 TARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 87776654 57899999999987 56678999999999999887765
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=1.1e-30 Score=212.61 Aligned_cols=220 Identities=12% Similarity=0.061 Sum_probs=169.9
Q ss_pred cccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEE-EEeecCCeE
Q 022184 58 VFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHL 136 (301)
Q Consensus 58 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i 136 (301)
.+..|.+.|.+++|+|+|++|++++.++ +++|+++..+..... +...+..+++.++++.+ ++++.|+.|
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ---------EMRHLSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE---------ECSCCCEEEECTTSSEEEEECSSTTEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee---------ecCCeEEEEEcCCCCEEEEEECCccEE
Confidence 3578999999999999999999988776 899998765432111 11247788888888877 567778999
Q ss_pred EEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCC-ceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 137 RIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-VAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 137 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
++||+.+++.+..+. +...|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. +...+++++ .. +
T Consensus 84 ~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~--l- 150 (355)
T 3vu4_A 84 HIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GL--L- 150 (355)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TE--E-
T ss_pred EEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--cE--E-
Confidence 999999998877664 66799999999764 3333 4789999999987 65555543 345566777 32 1
Q ss_pred EEEEeCCcceEEEEEccCce---------------E-eeeeeccCCCcEEEEEcCCCCEEEEeeCCCc-EEEEeCCCcee
Q 022184 216 CTVQRGDKALLAVYDISTWN---------------K-IGHKRLLRKPASVLSISLDGKYLAMGSKDGD-ICVVDVKKMEI 278 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~~~~---------------~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-i~i~~~~~~~~ 278 (301)
++.+++.+|.|++||+++++ + +..+..|...|++++|+|+|++|++++.|++ |++||+++++.
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~ 230 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL 230 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 12237899999999999765 1 5678889999999999999999999999998 99999999999
Q ss_pred ecccccc-ccCccEEEEEEccCCC
Q 022184 279 NHWSKRL-HLGTSIALVEFCPTQR 301 (301)
Q Consensus 279 ~~~~~~~-~~~~~v~~~~~spdg~ 301 (301)
+..+..+ | ...|.+++|+|||+
T Consensus 231 ~~~~~~g~h-~~~v~~~~~s~~~~ 253 (355)
T 3vu4_A 231 VREFRRGLD-RADVVDMKWSTDGS 253 (355)
T ss_dssp EEEEECTTC-CSCEEEEEECTTSC
T ss_pred EEEEEcCCC-CCcEEEEEECCCCC
Confidence 8887545 8 89999999999985
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.7e-29 Score=210.98 Aligned_cols=251 Identities=9% Similarity=0.006 Sum_probs=193.4
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCC
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDA 112 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 112 (301)
.++.+.+|.+++....+.. ...+.. ...+.+++|+|++.++++++.++.|++||+.+++........ ....|.
T Consensus 97 ~~~~~~l~~~d~~~~~~~~----~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~~~ 169 (433)
T 3bws_A 97 EELNEKLIALDKEGITHRF----ISRFKT-GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPE--KYKKKL 169 (433)
T ss_dssp GGGTTCEEECCBTTCSEEE----EEEEEC-SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCH--HHHTTC
T ss_pred CCCceEEEEECCCCCcceE----EEEEcC-CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcc--cccccC
Confidence 4455688888875432211 122333 345669999997777778788899999999877653211110 112466
Q ss_pred CCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEE-EeCCCcEEEEeCCCCceEEE
Q 022184 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLAT-TSTDGSARIWKTEDGVAWTF 191 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~ 191 (301)
..+.+++|+|+++++++++.|+.|++||+++++.+..+..+...+.+++|+|+++.+++ ++.|+.|++||+++++.+..
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 78999999999999999999999999999998888777777789999999999998754 45899999999999988777
Q ss_pred EeecCCCCeeEEEEccCCCcceEEEEEEeC--------CcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEE-EEe
Q 022184 192 LTRNSDEKIELCRFSKDGTKPFLFCTVQRG--------DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYL-AMG 262 (301)
Q Consensus 192 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~ 262 (301)
+..+ ..+.+++|+|+++. +++++ .|+.|++||+++++.+... .+...+..++|+|+++.+ +++
T Consensus 250 ~~~~--~~~~~~~~~~~g~~-----l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~ 321 (433)
T 3bws_A 250 TDKI--GLPRGLLLSKDGKE-----LYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSD 321 (433)
T ss_dssp CCCC--SEEEEEEECTTSSE-----EEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEE
T ss_pred ecCC--CCceEEEEcCCCCE-----EEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEe
Confidence 6543 35899999999987 33333 5889999999998876554 344578899999999755 566
Q ss_pred eCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 263 SKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 263 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+.|+.|++||+.+++....+. + ...+.+++|+|||+
T Consensus 322 ~~~~~v~v~d~~~~~~~~~~~--~-~~~~~~~~~s~dg~ 357 (433)
T 3bws_A 322 MCCSKIEVYDLKEKKVQKSIP--V-FDKPNTIALSPDGK 357 (433)
T ss_dssp TTTTEEEEEETTTTEEEEEEE--C-SSSEEEEEECTTSS
T ss_pred cCCCEEEEEECCCCcEEEEec--C-CCCCCeEEEcCCCC
Confidence 889999999999998877653 4 67899999999985
No 125
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=3e-30 Score=210.61 Aligned_cols=238 Identities=11% Similarity=0.075 Sum_probs=185.2
Q ss_pred CCceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEE--CCCCCeEEE
Q 022184 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAV--NPSGDDFVC 80 (301)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~~ 80 (301)
...+|++++|+|+ +.++++|+ .++.+++|++..... ..+.+|...|.+++| +|++++|++
T Consensus 85 h~~~v~~~~~~~~---~~~l~s~~------~dg~v~iwd~~~~~~---------~~~~~~~~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 85 HTGPVLDVCWSDD---GSKVFTAS------CDKTAKMWDLSSNQA---------IQIAQHDAPVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp CSSCEEEEEECTT---SSEEEEEE------TTSEEEEEETTTTEE---------EEEEECSSCEEEEEEEECSSCEEEEE
T ss_pred ccCCEEEEEECcC---CCEEEEEc------CCCcEEEEEcCCCCc---------eeeccccCceEEEEEEeCCCCCEEEE
Confidence 4678999999987 66777765 677889998865431 124579999999999 899999999
Q ss_pred EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccc--cCCccEE
Q 022184 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEP--KAHKSVL 158 (301)
Q Consensus 81 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~i~ 158 (301)
++.|+.|++||+.+++....+ .....+.++.+. ...+++++.++.+++|+++......... .....+.
T Consensus 147 ~~~dg~i~vwd~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 216 (368)
T 3mmy_A 147 GSWDKTLKFWDTRSSNPMMVL--------QLPERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHR 216 (368)
T ss_dssp EETTSEEEEECSSCSSCSEEE--------ECSSCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEE
T ss_pred ccCCCcEEEEECCCCcEEEEE--------ecCCCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCc
Confidence 999999999999877653222 233455555554 5588899999999999998765432221 2223556
Q ss_pred EEEecCCCcE----EEEEeCCCcEEEEeCCCC---ceEEEEeecCCC-----------CeeEEEEccCCCcceEEEEEEe
Q 022184 159 DMDFSLDSEF----LATTSTDGSARIWKTEDG---VAWTFLTRNSDE-----------KIELCRFSKDGTKPFLFCTVQR 220 (301)
Q Consensus 159 ~~~~~~~~~~----l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~-----------~v~~~~~~~~~~~~~~~~~~~~ 220 (301)
++++.++... +++++.|+.|++||++.. .....+..+... .+.+++|+|++++ ++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-----l~s~ 291 (368)
T 3mmy_A 217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT-----LATV 291 (368)
T ss_dssp EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC-----EEEE
T ss_pred eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE-----EEEE
Confidence 6666655544 999999999999999887 445566544322 5999999999987 7889
Q ss_pred CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeC
Q 022184 221 GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDV 273 (301)
Q Consensus 221 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~ 273 (301)
+.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+..+.|++
T Consensus 292 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 292 GSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp ETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred ccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 99999999999999999999999999999999999999999999876555544
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=5e-29 Score=206.72 Aligned_cols=238 Identities=19% Similarity=0.176 Sum_probs=179.1
Q ss_pred CceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC---cEEEEEEcCCccccccccccCCCCCC
Q 022184 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG---GCKLFEVYGGATDINLLAKKMPPLQD 111 (301)
Q Consensus 35 ~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~---~i~~w~~~~~~~~~~~~~~~~~~~~~ 111 (301)
+.+.+|+.+... ...+.+|...+.+++|+|+|++|++++.++ .|++||+.+++.. . ...+
T Consensus 159 ~~i~i~d~~g~~---------~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~-------l~~~ 221 (415)
T 2hqs_A 159 YELRVSDYDGYN---------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-Q-------VASF 221 (415)
T ss_dssp EEEEEEETTSCS---------CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-E-------EECC
T ss_pred ceEEEEcCCCCC---------CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-E-------eecC
Confidence 567777765322 234567899999999999999999998875 9999999877642 1 1124
Q ss_pred CCCeeEEEEeeCCCEEE-EeecCC--eEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeC-CC--cEEEEeCCC
Q 022184 112 AGPQKCLSFSVDGSRFA-AGGVDG--HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST-DG--SARIWKTED 185 (301)
Q Consensus 112 ~~~v~~~~~s~~~~~l~-~~~~dg--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~ 185 (301)
...+.+++|+|||+.|+ +++.++ .|++||+.+++. ..+..+...+.+++|+|||++|++++. ++ .|.+||+.+
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 56789999999999887 555555 499999988776 456667778999999999999988876 44 677889988
Q ss_pred CceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCC
Q 022184 186 GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKD 265 (301)
Q Consensus 186 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 265 (301)
++.. .+.. +...+..++|+|+|+++++ ......+..|.+||+.+++.. .+..+. .+.+++|+|||++|++++.+
T Consensus 301 ~~~~-~l~~-~~~~~~~~~~spdG~~l~~--~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 301 GAPQ-RITW-EGSQNQDADVSSDGKFMVM--VSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp SCCE-ECCC-SSSEEEEEEECTTSSEEEE--EEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEE
T ss_pred CCEE-EEec-CCCcccCeEECCCCCEEEE--EECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcC
Confidence 7643 3332 3346889999999997321 111112468999999988764 344443 78999999999999999887
Q ss_pred C---cEEEEeCCCceeeccccccccCccEEEEEEccC
Q 022184 266 G---DICVVDVKKMEINHWSKRLHLGTSIALVEFCPT 299 (301)
Q Consensus 266 ~---~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spd 299 (301)
+ .|++||+..+.... + ..| .+.|.+++|+|-
T Consensus 375 ~~~~~l~~~d~~g~~~~~-l-~~~-~~~v~~~~~~~~ 408 (415)
T 2hqs_A 375 GMGSVLNLVSTDGRFKAR-L-PAT-DGQVKFPAWSPY 408 (415)
T ss_dssp TTEEEEEEEETTSCCEEE-C-CCS-SSEEEEEEECCC
T ss_pred CCccEEEEEECCCCcEEE-e-eCC-CCCCcCCccccc
Confidence 7 79999998655443 3 456 789999999985
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=8.8e-29 Score=194.15 Aligned_cols=252 Identities=13% Similarity=0.069 Sum_probs=161.7
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC--cEEEEEEcCCcc----ccccccccC
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG--GCKLFEVYGGAT----DINLLAKKM 106 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--~i~~w~~~~~~~----~~~~~~~~~ 106 (301)
.+..+++|..... .++ ...+.+..|+.+|..+.+.||...|++..-.+ .-.++.+.-... ...+..
T Consensus 61 ~~~~v~lw~~~~~-~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s--- 132 (356)
T 2w18_A 61 CEDVVSLWKALDA-WQW----EKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK--- 132 (356)
T ss_dssp ESSEEEEEEESSS-SBE----EEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE---
T ss_pred ccceEEEcccCCC-ccc----eeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe---
Confidence 4566788887653 212 23556777888888888888655444332111 001111100000 000000
Q ss_pred CCCCCCCCeeEEEEeeCCCEEEEee--cCCeEEEEeC-CCcceecccccCCccEEEEEecC---CCcEEEEEeCCCcEEE
Q 022184 107 PPLQDAGPQKCLSFSVDGSRFAAGG--VDGHLRIMHW-PSLRIILDEPKAHKSVLDMDFSL---DSEFLATTSTDGSARI 180 (301)
Q Consensus 107 ~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~v~d~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i 180 (301)
-.+...+..+ ++++++.++. .|+.|++|++ ++++.+.....|...+..++|+| +++.|++++.|++|+|
T Consensus 133 --~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkI 207 (356)
T 2w18_A 133 --SGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVI 207 (356)
T ss_dssp --EEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEE
T ss_pred --CCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEE
Confidence 0011112221 3444444433 4899999999 45777777777888888899998 7789999999999999
Q ss_pred EeCCCCceEEEEeecCC--CCeeEEEEccCCCcceEE-------EEEEeCCcceEEEEEccCceEeeee-----eccCCC
Q 022184 181 WKTEDGVAWTFLTRNSD--EKIELCRFSKDGTKPFLF-------CTVQRGDKALLAVYDISTWNKIGHK-----RLLRKP 246 (301)
Q Consensus 181 ~d~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~d~~~~~~~~~~-----~~~~~~ 246 (301)
||+++++.+..+..++. ..+.+++|+|+|..+... .+++++.|++|++||..+++.+..+ .+|...
T Consensus 208 WDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~ 287 (356)
T 2w18_A 208 WNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR 287 (356)
T ss_dssp EETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC
T ss_pred EECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce
Confidence 99999999999976542 357788999999862111 1367889999999999999876544 234434
Q ss_pred cEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCcc-EEEEEEccCCC
Q 022184 247 ASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTS-IALVEFCPTQR 301 (301)
Q Consensus 247 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~-v~~~~~spdg~ 301 (301)
+.+. +.++.++++++.|++|+|||+.+++.+..+ .+| ... +..++|+|||+
T Consensus 288 ~lsg--~~sg~~lASgS~DgTIkIWDl~tGk~l~tL-~gH-~~~vvs~vafSPDG~ 339 (356)
T 2w18_A 288 FLEG--DVKDHCAAAILTSGTIAIWDLLLGQCTALL-PPV-SDQHWSFVKWSGTDS 339 (356)
T ss_dssp EEEE--EEETTEEEEEETTSCEEEEETTTCSEEEEE-CCC---CCCCEEEECSSSS
T ss_pred eEcc--ccCCCEEEEEcCCCcEEEEECCCCcEEEEe-cCC-CCCeEEEEEECCCCC
Confidence 3333 334889999999999999999999999887 566 444 55699999985
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=7e-29 Score=205.81 Aligned_cols=268 Identities=14% Similarity=0.096 Sum_probs=191.1
Q ss_pred eeEEEeeeecCCCccEEEecCCccc-c-CCcCceeEeee--CCCcceeeeCCceeccccccCCcceEEEECC--------
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRA-S-SSPSVLEIFSF--DPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-------- 73 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~-~-~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-------- 73 (301)
++...+|.+. +..+++.|+-... . ..+..+++|+. .... .+ ....+.+|...+..+++++
T Consensus 64 ~~~~~~w~~~--g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~ 135 (415)
T 2hqs_A 64 EVQPAAWSAL--GIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGT-VL-----AQNSYKVNKQWLRYAGHTASDEVFEKL 135 (415)
T ss_dssp GCCHHHHHTT--TCCEEEEEEEEECTTSCEEEEEEEEECSSSTTC-EE-----EEEEEEECGGGHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHhc--CCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCC-EE-----eeeEEEcChhHHHHHHHHHHHHHHHHH
Confidence 5666778744 3567767652210 0 12237888887 4332 11 1234667777777777664
Q ss_pred ------CCCeEEEEecC------CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC---eEEE
Q 022184 74 ------SGDDFVCSTTN------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG---HLRI 138 (301)
Q Consensus 74 ------~~~~l~~~~~d------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~v 138 (301)
.+..++.++.+ +.|++||+++... .. ...|...+.+++|+|||+.|++++.++ .|++
T Consensus 136 ~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~-~~-------l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~ 207 (415)
T 2hqs_A 136 TGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ-FV-------VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVI 207 (415)
T ss_dssp HSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC-EE-------EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC-EE-------EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEE
Confidence 26677766654 7999999975432 11 123567899999999999999999875 9999
Q ss_pred EeCCCcceecccccCCccEEEEEecCCCcEEE-EEeCCCc--EEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 139 MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLA-TTSTDGS--ARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
||+.+++.. .+..+...+.+++|+|||++|+ +++.++. |++||+++++. ..+..+ ...+..++|+|+|+.+
T Consensus 208 ~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~-~~~~~~~~~spdg~~l--- 281 (415)
T 2hqs_A 208 QTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG-RSNNTEPTWFPDSQNL--- 281 (415)
T ss_dssp EETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC-SSCEEEEEECTTSSEE---
T ss_pred EECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC-CCcccceEECCCCCEE---
Confidence 999988764 4556677899999999999887 6666654 99999998876 344433 4568999999999972
Q ss_pred EEEEeCCcc--eEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCC---CcEEEEeCCCceeeccccccccCcc
Q 022184 216 CTVQRGDKA--LLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKD---GDICVVDVKKMEINHWSKRLHLGTS 290 (301)
Q Consensus 216 ~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~ 290 (301)
++.+..++ .|.+||+.+++.. .+..+...+..++|+|+|++|++++.+ ..|++||+.+++.... ..+ . .
T Consensus 282 -~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l--~~~-~-~ 355 (415)
T 2hqs_A 282 -AFTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL--SST-F-L 355 (415)
T ss_dssp -EEEECTTSSCEEEEEETTSSCCE-ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC--CCS-S-S
T ss_pred -EEEECCCCCcEEEEEECCCCCEE-EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe--cCC-C-C
Confidence 22333344 7888899887643 344556678899999999999988764 5899999999887543 334 3 7
Q ss_pred EEEEEEccCCC
Q 022184 291 IALVEFCPTQR 301 (301)
Q Consensus 291 v~~~~~spdg~ 301 (301)
+.+++|+|||+
T Consensus 356 ~~~~~~spdg~ 366 (415)
T 2hqs_A 356 DETPSLAPNGT 366 (415)
T ss_dssp CEEEEECTTSS
T ss_pred cCCeEEcCCCC
Confidence 99999999985
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=4.4e-28 Score=191.79 Aligned_cols=245 Identities=14% Similarity=0.070 Sum_probs=174.6
Q ss_pred CCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcC-CccccccccccCCCCC
Q 022184 32 SSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYG-GATDINLLAKKMPPLQ 110 (301)
Q Consensus 32 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~-~~~~~~~~~~~~~~~~ 110 (301)
+.++.+.+|+..... . ..+..|...|.+++|+|++++|++++ ++.|++||+.+ ++... .....
T Consensus 19 ~~~~~i~~~d~~~~~--~-------~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~------~~~~~ 82 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRK--M-------RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK------VDTGF 82 (297)
T ss_dssp CCCEEEEEEETTTTE--E-------EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE------CCCTT
T ss_pred CcceeEEEEeCCCCc--e-------eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE------ecccc
Confidence 356677777664332 2 12456788999999999999999876 78899999987 55421 11111
Q ss_pred CCCCeeEEEEeeCCCEEEEee--cCCeEEEE--eCCCcceecccccCCccEEEEEecCCCcEEE-EEeCCCcEEEEeCC-
Q 022184 111 DAGPQKCLSFSVDGSRFAAGG--VDGHLRIM--HWPSLRIILDEPKAHKSVLDMDFSLDSEFLA-TTSTDGSARIWKTE- 184 (301)
Q Consensus 111 ~~~~v~~~~~s~~~~~l~~~~--~dg~i~v~--d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~- 184 (301)
+...+.+++|+|++++|++++ .++...+| ++.+++. ..+. ....+..++|+|++++|+ ++..++.+++|+++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 236788999999999999998 33445555 5454443 3332 334588999999999877 77789999999864
Q ss_pred -CCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEcc-CceEeeeeeccCCCcEEEEEcCCCCEEEEe
Q 022184 185 -DGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS-TWNKIGHKRLLRKPASVLSISLDGKYLAMG 262 (301)
Q Consensus 185 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 262 (301)
+++ ...+.. +...+.+++|+|+++.+ ++.+..++.+.+|++. .+.....+..+...+..++|+|++++|+++
T Consensus 161 ~~~~-~~~~~~-~~~~~~~~~~s~dg~~l----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 161 DSGV-ETRLTH-GEGRNDGPDYSPDGRWI----YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp TTCC-EEECCC-SSSCEEEEEECTTSSEE----EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEE
T ss_pred CCCc-ceEccc-CCCccccceECCCCCEE----EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEE
Confidence 333 333333 34468999999999962 2344457888899876 444555666666778899999999999988
Q ss_pred eCC-----------CcEEEEeCCCceeecccc-ccccCccEEEEEEccCCC
Q 022184 263 SKD-----------GDICVVDVKKMEINHWSK-RLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 263 ~~d-----------~~i~i~~~~~~~~~~~~~-~~~~~~~v~~~~~spdg~ 301 (301)
+.+ +.|++||+.+++...... ..| ...+..++|+|||+
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG-QGTMNSPNWSPDGD 284 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES-TTTSCSCCBCTTSS
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCC-CcccccceECCCCC
Confidence 765 569999999876543331 256 67899999999985
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1.9e-27 Score=211.48 Aligned_cols=223 Identities=11% Similarity=0.018 Sum_probs=165.4
Q ss_pred cceEEEECCCCCeEEEEecCCcEEEEEEcCC---ccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeC
Q 022184 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGG---ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW 141 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~ 141 (301)
.|.+++|+|||++|++++. +.|++||+.++ .. .....+...+..++|||||++|++++ ++.|++||+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~--------~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~ 179 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV--------RQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDL 179 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC--------CBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEET
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE--------EEcccCCcccccccCCCCCCEEEEEe-CCcEEEEec
Confidence 4889999999999999876 88999999877 32 12223557799999999999999987 568999999
Q ss_pred CCcceecccccCCcc----------------EEEEEecCCCcEEEEEeCCC-----------------------------
Q 022184 142 PSLRIILDEPKAHKS----------------VLDMDFSLDSEFLATTSTDG----------------------------- 176 (301)
Q Consensus 142 ~~~~~~~~~~~~~~~----------------i~~~~~~~~~~~l~~~~~d~----------------------------- 176 (301)
.+++.......+... +..++|+|||++|++++.|+
T Consensus 180 ~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 259 (741)
T 2ecf_A 180 ASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDA 259 (741)
T ss_dssp TTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSC
T ss_pred CCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCC
Confidence 887765443333222 47899999999999988765
Q ss_pred ----cEEEEeCCC-CceEEEEee-cCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCC----C
Q 022184 177 ----SARIWKTED-GVAWTFLTR-NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRK----P 246 (301)
Q Consensus 177 ----~i~i~d~~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~ 246 (301)
.|.+||+.+ ++....... .+...+..++| |||+.+++...-....+..|.+||+.+++.......+.. .
T Consensus 260 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 260 NVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp CCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred CCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 789999988 776544322 23446899999 999974322211234578899999999887655554442 4
Q ss_pred cEEEEEcCCCCEEEEeeCCCcEEEEeCC-CceeeccccccccCccEEEE-EEccCCC
Q 022184 247 ASVLSISLDGKYLAMGSKDGDICVVDVK-KMEINHWSKRLHLGTSIALV-EFCPTQR 301 (301)
Q Consensus 247 v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~-~~spdg~ 301 (301)
+..++|+|||+++++++.|+.++||.++ +++ ...+ ..+ ...|..+ .|+|||+
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l-~~~-~~~v~~~~~~s~dg~ 392 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL-THG-NWSVDELLAVDEKAG 392 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES-CCS-SSCEEEEEEEETTTT
T ss_pred CCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee-eec-ceEEEeEeEEeCCCC
Confidence 5689999999999999999987777765 334 4434 445 6678787 5999985
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=4.5e-26 Score=184.19 Aligned_cols=273 Identities=12% Similarity=0.138 Sum_probs=181.0
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
...+.+++|+|+ ++.++++.. .++.+.+|+++.....+.. ...+..+. .+..++|+|++++|++++.
T Consensus 37 ~~~~~~~~~spd---g~~l~~~~~-----~~~~v~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 37 PGQVQPMVVSPD---KRYLYVGVR-----PEFRVLAYRIAPDDGALTF----AAESALPG-SLTHISTDHQGQFVFVGSY 103 (343)
T ss_dssp SSCCCCEEECTT---SSEEEEEET-----TTTEEEEEEECTTTCCEEE----EEEEECSS-CCSEEEECTTSSEEEEEET
T ss_pred CCCCceEEECCC---CCEEEEeec-----CCCeEEEEEecCCCCceee----ccccccCC-CCcEEEEcCCCCEEEEEec
Confidence 346778899977 555555442 2377899999854433211 11222233 7899999999998877665
Q ss_pred -CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-cCCeEEEEeCCC-cceec----cccc-CCc
Q 022184 84 -NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPS-LRIIL----DEPK-AHK 155 (301)
Q Consensus 84 -d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~d~~~-~~~~~----~~~~-~~~ 155 (301)
++.|.+|++..+... .. .........+.+++|+|+++++++++ .++.|++||+.+ ++... .... ...
T Consensus 104 ~~~~i~~~d~~~~~~~-~~----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLPV-GV----VDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp TTTEEEEEEEETTEEE-EE----EEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred CCCeEEEEECCCCccc-cc----cccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC
Confidence 788999999522211 11 11112334588899999999888877 899999999987 54321 1222 234
Q ss_pred cEEEEEecCCCcEEEEEe-CCCcEEEEeCCC--Cce--EEEEeecC-----CCCeeEEEEccCCCcceEEEEEEeCCcce
Q 022184 156 SVLDMDFSLDSEFLATTS-TDGSARIWKTED--GVA--WTFLTRNS-----DEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~--~~~--~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (301)
.+..++|+|+++++++++ .++.|.+|+++. ++. ........ ...+..++|+|+++++ +++...++.
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l----~v~~~~~~~ 254 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL----YACDRTASL 254 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE----EEEETTTTE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE----EEEecCCCE
Confidence 788999999999776554 789999999953 433 22222111 1246689999999863 245667899
Q ss_pred EEEEEcc----CceEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEE--eCCCceeeccccccccCccEEEEEEcc
Q 022184 226 LAVYDIS----TWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVV--DVKKMEINHWSKRLHLGTSIALVEFCP 298 (301)
Q Consensus 226 i~~~d~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~--~~~~~~~~~~~~~~~~~~~v~~~~~sp 298 (301)
|.+||+. +.+.+..+..+.. +..++|+|+|++|++++ .++.|.+| |..+++..... .........+++|.|
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~-~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG-RYAVGQGPMWVVVNA 332 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE-EEECSSSCCEEEEEE
T ss_pred EEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc-ccccCCCCeeEEEEc
Confidence 9999998 2344444444434 88999999999888887 57999999 44466443222 111134567888887
Q ss_pred CC
Q 022184 299 TQ 300 (301)
Q Consensus 299 dg 300 (301)
+-
T Consensus 333 ~~ 334 (343)
T 1ri6_A 333 HE 334 (343)
T ss_dssp EC
T ss_pred cc
Confidence 63
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=1.7e-25 Score=181.61 Aligned_cols=276 Identities=12% Similarity=0.100 Sum_probs=195.3
Q ss_pred ceeEEEeeeecCCCccEEEecCCccc-cCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEE-e
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRA-SSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCS-T 82 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~ 82 (301)
..+..++|+|+ ++.++++...+. ...++. ++.++........ .+. ....+..++|+|+|++++++ .
T Consensus 41 ~~~~~~~~s~d---g~~l~~~~~~~~~~~~~~~--v~~~d~~~~~~~~------~~~-~~~~~~~~~~s~dg~~l~v~~~ 108 (353)
T 3vgz_A 41 KGAYEMAYSQQ---ENALWLATSQSRKLDKGGV--VYRLDPVTLEVTQ------AIH-NDLKPFGATINNTTQTLWFGNT 108 (353)
T ss_dssp SSEEEEEEETT---TTEEEEEECCCTTTEESEE--EEEECTTTCCEEE------EEE-ESSCCCSEEEETTTTEEEEEET
T ss_pred cCccceEECCC---CCEEEEEcCCCcCCCCCcc--EEEEcCCCCeEEE------EEe-cCCCcceEEECCCCCEEEEEec
Confidence 45678899976 444444332110 011344 4445554433321 121 13457889999999966655 4
Q ss_pred cCCcEEEEEEcCCccccccccccCCC--CCCCCCeeEEEEeeCCCEEEEee--cCCeEEEEeCCCcceecccccCCccEE
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPP--LQDAGPQKCLSFSVDGSRFAAGG--VDGHLRIMHWPSLRIILDEPKAHKSVL 158 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~i~ 158 (301)
.++.|.+||..+++....+....... ......+.+++|+|+++++++++ .++.|.+||+.+++....+..+...+.
T Consensus 109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST 188 (353)
T ss_dssp TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC
T ss_pred CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc
Confidence 57899999998876533332211000 00112368899999999887776 478899999999888776654555688
Q ss_pred EEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeec---CCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce
Q 022184 159 DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRN---SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN 235 (301)
Q Consensus 159 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 235 (301)
.++|+|+++++++++.++.|.+||+.+++....+... ....+..++|+|+++.+ .++...++.|.+||..+++
T Consensus 189 ~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l----~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRA----FITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp CCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEE----EEEESSSSEEEEEETTTCC
T ss_pred eEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEE----EEEeCCCCEEEEEECCCCc
Confidence 9999999999999999999999999999988777642 23347789999999973 2445567999999999988
Q ss_pred EeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 236 KIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 236 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+..+.... ...++|+|+++++++++ .++.|.+||..+++.+..+.. ...+.+++|+|||+
T Consensus 265 ~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 265 ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSADGK 326 (353)
T ss_dssp EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTTSC
T ss_pred EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCCCC
Confidence 876666433 25699999999776665 689999999999998877632 35789999999985
No 133
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=4e-26 Score=201.91 Aligned_cols=267 Identities=13% Similarity=0.081 Sum_probs=184.9
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
.+|.+++|+|+ ..+++. .++.+.+|+... ... ..+..+...+.+++|+|||++|+++ .+
T Consensus 82 ~~v~~~~~spd---~~~~~~--------~~~~i~~~d~~~--~~~-------~~l~~~~~~~~~~~~SpdG~~la~~-~~ 140 (706)
T 2z3z_A 82 FPSFRTLDAGR---GLVVLF--------TQGGLVGFDMLA--RKV-------TYLFDTNEETASLDFSPVGDRVAYV-RN 140 (706)
T ss_dssp CCCEEEEETTT---TEEEEE--------ETTEEEEEETTT--TEE-------EEEECCTTCCTTCEECTTSSEEEEE-ET
T ss_pred cCceeEEECCC---CeEEEE--------ECCEEEEEECCC--Cce-------EEccCCcccccCCcCCCCCCEEEEE-EC
Confidence 46999999977 344443 225556666543 222 1233456778999999999999985 78
Q ss_pred CcEEEEEEcC-----CccccccccccCCC-------CCCCCCeeEEEEeeCCCEEEEee---------------------
Q 022184 85 GGCKLFEVYG-----GATDINLLAKKMPP-------LQDAGPQKCLSFSVDGSRFAAGG--------------------- 131 (301)
Q Consensus 85 ~~i~~w~~~~-----~~~~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~~~~--------------------- 131 (301)
+.|++|++.+ ++............ .++...+.++.|||||++|++++
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 9999999987 54321111000000 00112258899999999999987
Q ss_pred ------------cCCeEEEEeCCCcceecccc--cCCccEEEEEecCCCcEEEEEeCCC-----cEEEEeCCCCceEEEE
Q 022184 132 ------------VDGHLRIMHWPSLRIILDEP--KAHKSVLDMDFSLDSEFLATTSTDG-----SARIWKTEDGVAWTFL 192 (301)
Q Consensus 132 ------------~dg~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~ 192 (301)
.+..|++||+.+++...... .+...+.+++|+|||++|++++.++ .|++||+.+++....+
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 44789999998887543332 3446799999999999999988775 8999999998444333
Q ss_pred e-ecCCC---CeeEEEEcc--CCCcceEEEEEEeCCcceEEEEEcc-CceEeeeeeccCCCcEE-EEEcCCCCEEEEeeC
Q 022184 193 T-RNSDE---KIELCRFSK--DGTKPFLFCTVQRGDKALLAVYDIS-TWNKIGHKRLLRKPASV-LSISLDGKYLAMGSK 264 (301)
Q Consensus 193 ~-~~~~~---~v~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~ 264 (301)
. ..... .+..++|+| +|+. ++++..++.+++|++. +++.+..+..+...+.. ++|+|+++.|++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~-----l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQF-----IWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEE-----EEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEES
T ss_pred EEccCCCeECccCCceeecCCCCEE-----EEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEec
Confidence 2 22221 246789999 9985 5677788888888876 55666666666667776 799999998876655
Q ss_pred C-C----cEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 265 D-G----DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 265 d-~----~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+ + .|..||+.+++.... .+ ...+.+++|+|||+
T Consensus 376 ~~~~~~~~l~~~d~~~~~~~~l---~~-~~~~~~~~~spdg~ 413 (706)
T 2z3z_A 376 EASPLERHFYCIDIKGGKTKDL---TP-ESGMHRTQLSPDGS 413 (706)
T ss_dssp SSCTTCBEEEEEETTCCCCEES---CC-SSSEEEEEECTTSS
T ss_pred CCCCceEEEEEEEcCCCCceec---cC-CCceEEEEECCCCC
Confidence 4 3 677778877763332 24 56789999999985
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=7.2e-26 Score=193.35 Aligned_cols=257 Identities=11% Similarity=0.055 Sum_probs=186.4
Q ss_pred eeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceecccc-ccCCcceEEEECCCCCeEEEEecCCcEEE
Q 022184 11 SWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFD-ESEGDPMTIAVNPSGDDFVCSTTNGGCKL 89 (301)
Q Consensus 11 ~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (301)
+++|+ +.+++++. .++.+.+|+.+.. .+ ...+. ++. +..++|+|+|++|++++.|++|.+
T Consensus 144 ~~~p~---~~~~vs~~------~d~~V~v~D~~t~--~~------~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v 204 (543)
T 1nir_A 144 DLDLP---NLFSVTLR------DAGQIALVDGDSK--KI------VKVIDTGYA--VHISRMSASGRYLLVIGRDARIDM 204 (543)
T ss_dssp CCCGG---GEEEEEEG------GGTEEEEEETTTC--CE------EEEEECSTT--EEEEEECTTSCEEEEEETTSEEEE
T ss_pred ccCCC---CEEEEEEc------CCCeEEEEECCCc--eE------EEEEecCcc--cceEEECCCCCEEEEECCCCeEEE
Confidence 35554 44555543 5567788765432 22 12233 333 889999999999999999999999
Q ss_pred EEE--cCCccccccccccCCCCCCCCCeeEEEEee----CCCEEEEeec-CCeEEEEeCCCcceecccccC---------
Q 022184 90 FEV--YGGATDINLLAKKMPPLQDAGPQKCLSFSV----DGSRFAAGGV-DGHLRIMHWPSLRIILDEPKA--------- 153 (301)
Q Consensus 90 w~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~--------- 153 (301)
||+ .+.+.... +.+...+..++|+| ||+++++++. +++|.+||..+++.+..+..+
T Consensus 205 ~D~~~~t~~~~~~--------i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~ 276 (543)
T 1nir_A 205 IDLWAKEPTKVAE--------IKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTY 276 (543)
T ss_dssp EETTSSSCEEEEE--------EECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCE
T ss_pred EECcCCCCcEEEE--------EecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCcccc
Confidence 999 55543221 22345679999999 9999999885 899999999998877665432
Q ss_pred -C-ccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEE
Q 022184 154 -H-KSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (301)
Q Consensus 154 -~-~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d 230 (301)
. ..+..+.++|++. ++++...++.|.+||+.+.+.+..........+..+.|+|+|+++ ++++..+++|.+||
T Consensus 277 ~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l----~va~~~~~~v~v~D 352 (543)
T 1nir_A 277 HPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYF----MTAANNSNKVAVID 352 (543)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEE----EEEEGGGTEEEEEE
T ss_pred ccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEE----EEEecCCCeEEEEE
Confidence 2 2688999999766 566677889999999988665442222234458899999999972 35566788999999
Q ss_pred ccCceEeeeeec----cCCCcEEEEEcCC-CCEEEEee-CCCcEEEEeCCC-------ceeeccccccccCccEEEEEEc
Q 022184 231 ISTWNKIGHKRL----LRKPASVLSISLD-GKYLAMGS-KDGDICVVDVKK-------MEINHWSKRLHLGTSIALVEFC 297 (301)
Q Consensus 231 ~~~~~~~~~~~~----~~~~v~~~~~s~~-~~~l~~~~-~d~~i~i~~~~~-------~~~~~~~~~~~~~~~v~~~~~s 297 (301)
..+++.+..+.. |......+ ++|+ ++.++++. .|++|.+||+.+ ++.++.+ ..| ...+..++|+
T Consensus 353 ~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l-~~~-g~~~~~v~~~ 429 (543)
T 1nir_A 353 SKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL-QGQ-GGGSLFIKTH 429 (543)
T ss_dssp TTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-ECS-CSCCCCEECC
T ss_pred CCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE-EcC-CCCceEEEcC
Confidence 999998877664 33333333 4787 66666665 579999999998 7777777 456 6778889999
Q ss_pred cCCC
Q 022184 298 PTQR 301 (301)
Q Consensus 298 pdg~ 301 (301)
|||+
T Consensus 430 pdg~ 433 (543)
T 1nir_A 430 PKSS 433 (543)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 9986
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.5e-25 Score=181.09 Aligned_cols=249 Identities=11% Similarity=0.108 Sum_probs=172.3
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC-CcEEEEEEc--CCccccccccccCCCC
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN-GGCKLFEVY--GGATDINLLAKKMPPL 109 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-~~i~~w~~~--~~~~~~~~~~~~~~~~ 109 (301)
.++.+.+|+++...... ......|...+.+++|+|++++|++++.+ +.|.+|+++ ++.... . ..+
T Consensus 13 ~~~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~--~----~~~ 80 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALT------LTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF--A----AES 80 (343)
T ss_dssp GGTEEEEEEECTTSCEE------EEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE--E----EEE
T ss_pred CCCeEEEEEECCCCcEE------EeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceee--c----ccc
Confidence 56788999987533111 11123467789999999999999988876 899999997 333211 1 011
Q ss_pred CCCCCeeEEEEeeCCCEEEEeec-CCeEEEEeCC---CcceecccccCCccEEEEEecCCCcEEEEEe-CCCcEEEEeCC
Q 022184 110 QDAGPQKCLSFSVDGSRFAAGGV-DGHLRIMHWP---SLRIILDEPKAHKSVLDMDFSLDSEFLATTS-TDGSARIWKTE 184 (301)
Q Consensus 110 ~~~~~v~~~~~s~~~~~l~~~~~-dg~i~v~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~ 184 (301)
.....+..++|+|++++|++++. ++.|.+||+. ..+....+ .....+.+++|+|+++++++++ .++.|++||+.
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 81 ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-cCCCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 12236789999999998877664 8899999994 33343333 3345688999999999888877 88999999998
Q ss_pred C-CceEE----EEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC--ceE--eeeeec---c---CCCcEE
Q 022184 185 D-GVAWT----FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST--WNK--IGHKRL---L---RKPASV 249 (301)
Q Consensus 185 ~-~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--~~~--~~~~~~---~---~~~v~~ 249 (301)
+ ++... .+..+....+..++|+|+++++ +++...++.|.+||+.. ++. ...... . ...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l----~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA----YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE----EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEE----EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 7 55432 2333334468899999999963 34556789999999953 322 222221 1 234668
Q ss_pred EEEcCCCCEEEEee-CCCcEEEEeCC--C--ceeeccccccccCccEEEEEEccCCC
Q 022184 250 LSISLDGKYLAMGS-KDGDICVVDVK--K--MEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 250 ~~~s~~~~~l~~~~-~d~~i~i~~~~--~--~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++|+|++++|+++. .++.|.+|++. + .+.+..+ ..+ ..+.+++|+|||+
T Consensus 236 i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~--~~~~~~~~s~dg~ 289 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ-PTE--TQPRGFNVDHSGK 289 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE-ECS--SSCCCEEECTTSS
T ss_pred eEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee-cCC--CccceEEECCCCC
Confidence 99999999887554 78999999998 3 3344333 222 3488999999985
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=2.2e-25 Score=190.40 Aligned_cols=274 Identities=6% Similarity=0.033 Sum_probs=197.4
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECC----CCCeEEE
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP----SGDDFVC 80 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~~ 80 (301)
..+.+++|+|+ ++++++++ .++.+.+|+.+...... ...+. +...+..++|+| +|++|++
T Consensus 179 ~~~~~v~~spd---g~~l~v~~------~d~~V~v~D~~~~t~~~------~~~i~-~g~~p~~va~sp~~~~dg~~l~v 242 (543)
T 1nir_A 179 YAVHISRMSAS---GRYLLVIG------RDARIDMIDLWAKEPTK------VAEIK-IGIEARSVESSKFKGYEDRYTIA 242 (543)
T ss_dssp TTEEEEEECTT---SCEEEEEE------TTSEEEEEETTSSSCEE------EEEEE-CCSEEEEEEECCSTTCTTTEEEE
T ss_pred cccceEEECCC---CCEEEEEC------CCCeEEEEECcCCCCcE------EEEEe-cCCCcceEEeCCCcCCCCCEEEE
Confidence 34788999988 66777655 34778888884333222 12233 345689999999 9999998
Q ss_pred Eec-CCcEEEEEEcCCccccccccccC----CCCCCCCCeeEEEEeeCCCE-EEEeecCCeEEEEeCCCcceec--cccc
Q 022184 81 STT-NGGCKLFEVYGGATDINLLAKKM----PPLQDAGPQKCLSFSVDGSR-FAAGGVDGHLRIMHWPSLRIIL--DEPK 152 (301)
Q Consensus 81 ~~~-d~~i~~w~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~v~d~~~~~~~~--~~~~ 152 (301)
++. +++|.+||..+.+....+..... ..+.....+..+.++|++.. +++...++.|.+||+.+.+.+. .+ .
T Consensus 243 ~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~ 321 (543)
T 1nir_A 243 GAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-G 321 (543)
T ss_dssp EEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-E
T ss_pred EEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-c
Confidence 874 89999999887765433322110 01112347899999997665 5566778999999998765433 22 3
Q ss_pred CCccEEEEEecCCCcEEEEEe-CCCcEEEEeCCCCceEEEEeec---CCCCeeEEEEccCCCcceEEEEEEeC-CcceEE
Q 022184 153 AHKSVLDMDFSLDSEFLATTS-TDGSARIWKTEDGVAWTFLTRN---SDEKIELCRFSKDGTKPFLFCTVQRG-DKALLA 227 (301)
Q Consensus 153 ~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 227 (301)
+...+.+++|+|++++|++++ .+++|.+||+++++.+..+... +......+ ++|++..+ .+++. .+++|.
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~----~~s~~~~d~~V~ 396 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPV----WSTSHLGDGSIS 396 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEE----EEEEBSSSSEEE
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccE----EEeccCCCceEE
Confidence 445678899999999776554 6889999999999988887642 22222222 46775542 34443 689999
Q ss_pred EEEccC-------ceEeeeeeccCCCcEEEEEcCCCCEEEEee-------CCCcEEEEeCCCceee-cccc-------cc
Q 022184 228 VYDIST-------WNKIGHKRLLRKPASVLSISLDGKYLAMGS-------KDGDICVVDVKKMEIN-HWSK-------RL 285 (301)
Q Consensus 228 ~~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~d~~i~i~~~~~~~~~-~~~~-------~~ 285 (301)
+||+.+ ++.+..+..+...+..++++|++++|++++ .+++|.+||+.+++.. ..+. ..
T Consensus 397 v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~ 476 (543)
T 1nir_A 397 LIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGE 476 (543)
T ss_dssp EEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCS
T ss_pred EEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCC
Confidence 999998 888899998888889999999999999987 2679999999998766 3321 23
Q ss_pred ccCccEEEEEEccCCC
Q 022184 286 HLGTSIALVEFCPTQR 301 (301)
Q Consensus 286 ~~~~~v~~~~~spdg~ 301 (301)
+ ...+..++|+|||+
T Consensus 477 ~-~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 477 G-AKRVVQPEYNKRGD 491 (543)
T ss_dssp S-CCEEEEEEECSSSS
T ss_pred C-CCceEeccCCCCCC
Confidence 4 57899999999996
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=3e-26 Score=203.24 Aligned_cols=270 Identities=11% Similarity=0.065 Sum_probs=181.3
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCC---cceEEEECCCCCeEEEE
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEG---DPMTIAVNPSGDDFVCS 81 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~ 81 (301)
..+.+++|+|| +.+++. + .++.+.+|+...... ...+.+|.. .|.+++|||||++|+++
T Consensus 17 ~~~~~~~~spd---g~~~~~-~------~dg~i~~~d~~~g~~--------~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 78 (723)
T 1xfd_A 17 IHDPEAKWISD---TEFIYR-E------QKGTVRLWNVETNTS--------TVLIEGKKIESLRAIRYEISPDREYALFS 78 (723)
T ss_dssp CCCCCCCBSSS---SCBCCC-C------SSSCEEEBCGGGCCC--------EEEECTTTTTTTTCSEEEECTTSSEEEEE
T ss_pred ccccccEEcCC---CcEEEE-e------CCCCEEEEECCCCcE--------EEEeccccccccccceEEECCCCCEEEEE
Confidence 44678999988 445543 2 456677776654321 122344443 49999999999999998
Q ss_pred ecC---------CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccccc
Q 022184 82 TTN---------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK 152 (301)
Q Consensus 82 ~~d---------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 152 (301)
+.+ +.+++||+++++. ..+. ....+...+..++|||||+.|++++. +.|++||+.+++.......
T Consensus 79 ~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~----~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~ 152 (723)
T 1xfd_A 79 YNVEPIYQHSYTGYYVLSKIPHGDP-QSLD----PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVST 152 (723)
T ss_dssp ESCCCCSSSCCCSEEEEEESSSCCC-EECC----CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECC
T ss_pred ecCccceeecceeeEEEEECCCCce-Eecc----CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecC
Confidence 764 6788999987764 1111 11123345788999999999999885 7999999988876544433
Q ss_pred CCcc------------------EEEEEecCCCcEEEEEeCCC----------------------------------cEEE
Q 022184 153 AHKS------------------VLDMDFSLDSEFLATTSTDG----------------------------------SARI 180 (301)
Q Consensus 153 ~~~~------------------i~~~~~~~~~~~l~~~~~d~----------------------------------~i~i 180 (301)
+... +.+++|+|||++|++++.|+ .|++
T Consensus 153 ~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~ 232 (723)
T 1xfd_A 153 GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHV 232 (723)
T ss_dssp CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEE
T ss_pred CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEE
Confidence 3332 27899999999999987553 7999
Q ss_pred EeCCCCceEEEEeec-----CCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeecc-CCCc----EEE
Q 022184 181 WKTEDGVAWTFLTRN-----SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL-RKPA----SVL 250 (301)
Q Consensus 181 ~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v----~~~ 250 (301)
||+.+++....+..+ +...+..++|+|||+.++ +....+..+..|.+||+.+++.......+ ...+ ..+
T Consensus 233 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~-~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 311 (723)
T 1xfd_A 233 IGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAV-TWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEP 311 (723)
T ss_dssp EESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEE-EEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCC
T ss_pred EECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEE-EEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCc
Confidence 999888765555433 134588999999998521 11111235578999999988766544332 2333 378
Q ss_pred EEcCCCCEEEEe--eCCC------cEEEEe-CCCcee--eccccccccCccEEE-EEEccCCC
Q 022184 251 SISLDGKYLAMG--SKDG------DICVVD-VKKMEI--NHWSKRLHLGTSIAL-VEFCPTQR 301 (301)
Q Consensus 251 ~~s~~~~~l~~~--~~d~------~i~i~~-~~~~~~--~~~~~~~~~~~~v~~-~~~spdg~ 301 (301)
+|+|||+.|+.. ..++ .|.+|| ..+++. ...+..+ ...+.. ++|+|||+
T Consensus 312 ~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~~~~~spdg~ 372 (723)
T 1xfd_A 312 VFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG--DWDVTKILAYDEKGN 372 (723)
T ss_dssp EECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS--SSCEEEEEEEETTTT
T ss_pred eEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC--CeEEEeeeEEcCCCC
Confidence 999999977754 4566 577788 444441 3333222 234444 79999986
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1e-25 Score=200.32 Aligned_cols=268 Identities=9% Similarity=0.066 Sum_probs=186.0
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcc-eeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTT-SVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..|.+++|+|| ++.++++.. +.+.+|+.+.... . ...+..|...+..++|+|||++|++++
T Consensus 109 ~~v~~~~~SpD---g~~l~~~~~-------~~i~~~d~~~~~~~~-------~~~l~~~~~~~~~~~~SPDG~~la~~~- 170 (741)
T 2ecf_A 109 TGIVDYQWSPD---AQRLLFPLG-------GELYLYDLKQEGKAA-------VRQLTHGEGFATDAKLSPKGGFVSFIR- 170 (741)
T ss_dssp EESCCCEECTT---SSEEEEEET-------TEEEEEESSSCSTTS-------CCBCCCSSSCEEEEEECTTSSEEEEEE-
T ss_pred cCcceeEECCC---CCEEEEEeC-------CcEEEEECCCCCcce-------EEEcccCCcccccccCCCCCCEEEEEe-
Confidence 34789999988 667776542 5556666543310 1 123556778899999999999999886
Q ss_pred CCcEEEEEEcCCccccccccccCCCC----------CCCCCeeEEEEeeCCCEEEEeecCC-------------------
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPL----------QDAGPQKCLSFSVDGSRFAAGGVDG------------------- 134 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~s~~~~~l~~~~~dg------------------- 134 (301)
++.|++||+.+++........ .... .....+..++|||||++|++++.|+
T Consensus 171 ~~~i~~~d~~~g~~~~~~~~~-~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 171 GRNLWVIDLASGRQMQLTADG-STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp TTEEEEEETTTTEEEECCCCC-CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred CCcEEEEecCCCCEEEeccCC-ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccce
Confidence 458999999876542111100 0000 0001247899999999999987765
Q ss_pred --------------eEEEEeCCC-cceecccc--cCCccEEEEEecCCCcEEEEEeC-----CCcEEEEeCCCCceEEEE
Q 022184 135 --------------HLRIMHWPS-LRIILDEP--KAHKSVLDMDFSLDSEFLATTST-----DGSARIWKTEDGVAWTFL 192 (301)
Q Consensus 135 --------------~i~v~d~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~ 192 (301)
.|++||+.+ ++...... .+...+..++| |||++|++++. +..|++||+.+++....+
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 889999988 76543322 35568999999 99999887664 567999999999887776
Q ss_pred eecCCC---CeeEEEEccCCCcceEEEEEEeCCcceEEEEEcc-CceEeeeeeccCCCcEEE-EEcCCCCEEEEee-CCC
Q 022184 193 TRNSDE---KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS-TWNKIGHKRLLRKPASVL-SISLDGKYLAMGS-KDG 266 (301)
Q Consensus 193 ~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~-~d~ 266 (301)
..+... .+..++|+|||+. +++++.++.+.+|.+. .++ ...+..+...+..+ .|+|+++.|++.+ .++
T Consensus 329 ~~~~~~~~~~~~~~~~spdg~~-----~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~ 402 (741)
T 2ecf_A 329 HETSPTWVPLHNSLRFLDDGSI-----LWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIES 402 (741)
T ss_dssp EEECSSCCCCCSCCEECTTSCE-----EEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSC
T ss_pred EcCCCCcCCcCCceEECCCCeE-----EEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCC
Confidence 655432 3468999999995 5667778877777654 334 55666677778777 5999998776554 444
Q ss_pred --cEEEEeCCC-ceeeccccccccCccEEEEEEccCCC
Q 022184 267 --DICVVDVKK-MEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 267 --~i~i~~~~~-~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.++||++.. +.....+. . ...+..++|+|||+
T Consensus 403 ~~~~~l~~~~~~g~~~~~l~--~-~~~~~~~~~spdg~ 437 (741)
T 2ecf_A 403 ARESQIYAVPLQGGQPQRLS--K-APGMHSASFARNAS 437 (741)
T ss_dssp TTCBEEEEEETTCCCCEECC--C-SCSEEEEEECTTSS
T ss_pred CceEEEEEEEcCCCCeeecc--c-CCCceEEEECCCCC
Confidence 899999864 44344332 2 45688999999985
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=1.5e-25 Score=198.81 Aligned_cols=282 Identities=11% Similarity=0.026 Sum_probs=184.6
Q ss_pred eeEEEeeeecCCCccEEEecCCcccc---CCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRAS---SSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 82 (301)
.|.+++|+|| ++.++++...... ..++.+.+|+.+..... ......+|...+..++|||||++|++++
T Consensus 62 ~v~~~~~SpD---g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~~~~SPdG~~la~~~ 132 (723)
T 1xfd_A 62 RAIRYEISPD---REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGPKGQQLIFIF 132 (723)
T ss_dssp TCSEEEECTT---SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCSSTTCEEEEE
T ss_pred ccceEEECCC---CCEEEEEecCccceeecceeeEEEEECCCCceE------eccCCccccccccccEECCCCCEEEEEE
Confidence 4889999988 6677776543221 12356667766543321 1112345666799999999999999987
Q ss_pred cCCcEEEEEEcCCccccccccccCCC-C----------CCCCCeeEEEEeeCCCEEEEeecCC-----------------
Q 022184 83 TNGGCKLFEVYGGATDINLLAKKMPP-L----------QDAGPQKCLSFSVDGSRFAAGGVDG----------------- 134 (301)
Q Consensus 83 ~d~~i~~w~~~~~~~~~~~~~~~~~~-~----------~~~~~v~~~~~s~~~~~l~~~~~dg----------------- 134 (301)
. +.|++|++.+++............ . +....+.+++|||||+.|++++.++
T Consensus 133 ~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~ 211 (723)
T 1xfd_A 133 E-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYP 211 (723)
T ss_dssp T-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSC
T ss_pred C-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCC
Confidence 6 789999998765422111100000 0 0012347899999999999887553
Q ss_pred -----------------eEEEEeCCCcceecccccC------CccEEEEEecCCCcEEEEEeC----CCcEEEEeCCCCc
Q 022184 135 -----------------HLRIMHWPSLRIILDEPKA------HKSVLDMDFSLDSEFLATTST----DGSARIWKTEDGV 187 (301)
Q Consensus 135 -----------------~i~v~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~ 187 (301)
.|++||+.+++....+..+ ...+..++|+|||+++++... +..|++||+.+++
T Consensus 212 ~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 212 TVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp CCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred cceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 7999999888754444433 457899999999998877653 3579999999998
Q ss_pred eEEEEeecCCCCe----eEEEEccCCCcceEEEEEEeCCcc------eEEEEE-ccCceE--eeeeeccCCCcEE-EEEc
Q 022184 188 AWTFLTRNSDEKI----ELCRFSKDGTKPFLFCTVQRGDKA------LLAVYD-ISTWNK--IGHKRLLRKPASV-LSIS 253 (301)
Q Consensus 188 ~~~~~~~~~~~~v----~~~~~~~~~~~~~~~~~~~~~~~~------~i~~~d-~~~~~~--~~~~~~~~~~v~~-~~~s 253 (301)
....+..++...+ ..++|+|||+.+++ .+...++ .|.+|| ..+++. ...+......+.. ++|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~---~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s 368 (723)
T 1xfd_A 292 CTKKHEDESEAWLHRQNEEPVFSKDGRKFFF---IRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD 368 (723)
T ss_dssp EEEEEEEECSSCCCCCCCCCEECTTSCSEEE---EEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred ceEEEEeccCCEEeccCCCceEcCCCCeEEE---EEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence 7766654443333 37899999997321 2244455 677788 344431 3344433344544 6999
Q ss_pred CCCCEEEEeeCC---CcEEEEeCCCce--eecccccc--ccCccEEEEEEccCCC
Q 022184 254 LDGKYLAMGSKD---GDICVVDVKKME--INHWSKRL--HLGTSIALVEFCPTQR 301 (301)
Q Consensus 254 ~~~~~l~~~~~d---~~i~i~~~~~~~--~~~~~~~~--~~~~~v~~~~~spdg~ 301 (301)
|||+.|+..+.+ +.+++|++.... ....+... | ...+..++|+|||+
T Consensus 369 pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~spdg~ 422 (723)
T 1xfd_A 369 EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVE-NCTYFSASFSHSMD 422 (723)
T ss_dssp TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSS-SCCCCEEEECTTSS
T ss_pred CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccC-CCCeEEEEECCCCC
Confidence 999999876655 789999986432 22222111 4 56688999999985
No 140
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=3.7e-25 Score=203.23 Aligned_cols=265 Identities=14% Similarity=0.122 Sum_probs=198.0
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
...+.+++|+++ .+++++. .++..++|.++..+... ..+..|. .+...+|+|+|++|+++ .
T Consensus 203 ~~~v~~~~~s~d----~l~~~~~------~dg~~~l~~~~~~g~~~-------~~l~~~~-~~~~~~~SpDG~~la~~-~ 263 (1045)
T 1k32_A 203 STHVSSPVIVGH----RIYFITD------IDGFGQIYSTDLDGKDL-------RKHTSFT-DYYPRHLNTDGRRILFS-K 263 (1045)
T ss_dssp SSCCEEEEEETT----EEEEEEC------TTSSCEEEEEETTSCSC-------EECCCCC-SSCEEEEEESSSCEEEE-E
T ss_pred CCcccceEEeCC----EEEEEEe------ccCceEEEEEeCCCCcc-------eEecCCC-CcceeeEcCCCCEEEEE-e
Confidence 456788889855 3444433 34667899988655322 1233444 46778999999999987 5
Q ss_pred CCcEEEEEEcCCcccccccccc----CCCCCCCCCeeEEEEe-eCCCEEEEeecCCeEEEEeCCCcceecccccCCc-cE
Q 022184 84 NGGCKLFEVYGGATDINLLAKK----MPPLQDAGPQKCLSFS-VDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SV 157 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-~i 157 (301)
++.|++|++...... .+.... .....+...+..++|+ |||+.|++++ ++.+++|++..++.. .+..+.. .+
T Consensus 264 ~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~ 340 (1045)
T 1k32_A 264 GGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRY 340 (1045)
T ss_dssp TTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEE
T ss_pred CCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceE
Confidence 889999998433221 111100 0001133468999999 9999999888 889999999877654 3555666 89
Q ss_pred EEEEecCCCcEEEEEeCCCcEE-EEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE
Q 022184 158 LDMDFSLDSEFLATTSTDGSAR-IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236 (301)
Q Consensus 158 ~~~~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 236 (301)
..++|+ ||+.|++++.+..+. +||+.+++.. .+. .+...+..++|+|||+. ++.++.++.|++||+.+++.
T Consensus 341 ~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~-~~~~~~~~~~~SpDG~~-----la~~~~~~~v~~~d~~tg~~ 412 (1045)
T 1k32_A 341 VRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFE-ENLGNVFAMGVDRNGKF-----AVVANDRFEIMTVDLETGKP 412 (1045)
T ss_dssp EEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECC-CCCCSEEEEEECTTSSE-----EEEEETTSEEEEEETTTCCE
T ss_pred EeeeEc-CCCeEEEEECCCceEEEEECCCCCce-Eec-CCccceeeeEECCCCCE-----EEEECCCCeEEEEECCCCce
Confidence 999999 999999999888888 9999877654 333 44457999999999998 66777889999999999887
Q ss_pred eeeeeccCCCcEEEEEcCCCCEEEEeeCCC----------cEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 237 IGHKRLLRKPASVLSISLDGKYLAMGSKDG----------DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 237 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----------~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
......+...+..++|||||++|++++.++ .|++||+.+++.... ..| ...+..++|+|||+
T Consensus 413 ~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l--~~~-~~~~~~~~~spdG~ 484 (1045)
T 1k32_A 413 TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA--TTE-NSHDYAPAFDADSK 484 (1045)
T ss_dssp EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC--SCS-SSBEEEEEECTTSC
T ss_pred EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe--eCC-CcccCCceEcCCCC
Confidence 766667888899999999999999887654 899999999884433 445 67789999999986
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=3.7e-24 Score=173.57 Aligned_cols=252 Identities=12% Similarity=0.124 Sum_probs=171.2
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec---CCcEEEEEEcCCccccccccccCCCC
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT---NGGCKLFEVYGGATDINLLAKKMPPL 109 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~~w~~~~~~~~~~~~~~~~~~~ 109 (301)
.++.+.+|.++.....+.. .....+...+..++|+|+|+ |++++. ++.|++|++.++....... ..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~-----~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~-----~~ 82 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTN-----DGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNT-----VV 82 (347)
T ss_dssp SCCEEEEEEEETTTTEEEE-----EEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEE-----EE
T ss_pred CCCCEEEEEEcCCCCeEEE-----eeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeee-----ee
Confidence 4567899999987655432 12234557788999999999 665554 5899999997665311110 01
Q ss_pred CCCCCeeEEEEeeCCCEEEEee-cCCeEEEEeCCC-cc--eeccccc---------CCccEEEEEecCCCcEEEEEeCCC
Q 022184 110 QDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPS-LR--IILDEPK---------AHKSVLDMDFSLDSEFLATTSTDG 176 (301)
Q Consensus 110 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~d~~~-~~--~~~~~~~---------~~~~i~~~~~~~~~~~l~~~~~d~ 176 (301)
.+...+..++|+|+|++|++++ .++.+.+|++.. +. .+..+.. ....+.+++|+|+|+++++...++
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 1345678999999999988887 679999999952 22 2222211 112488999999999666666788
Q ss_pred cEEEEeCC-CCceEE--EEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC--ceE--eeeeeccC-----
Q 022184 177 SARIWKTE-DGVAWT--FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST--WNK--IGHKRLLR----- 244 (301)
Q Consensus 177 ~i~i~d~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--~~~--~~~~~~~~----- 244 (301)
.|.+|++. +++... .+.......+..++|+|+|+++ +++...++.|.+|++.. ++. +.......
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l----~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYA----FLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEE----EEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEE----EEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 99999998 454332 2233333357889999999963 35567788999999874 443 22222222
Q ss_pred -CCcEEEEEcCCCCEEEE-eeCCCcEEEEeCCCc---eeeccccccccCccEEEEEEccCCC
Q 022184 245 -KPASVLSISLDGKYLAM-GSKDGDICVVDVKKM---EINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 245 -~~v~~~~~s~~~~~l~~-~~~d~~i~i~~~~~~---~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
..+..++|+|||++|++ ...++.|.+|++... +.+..+ ..+ ...+..++|+|||+
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~-~~~-~~~~~~~~~spdg~ 298 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI-STE-GDFPRDFDLDPTEA 298 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE-ECS-SSCCCEEEECTTSS
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE-ecC-CCCcCeEEECCCCC
Confidence 34788999999998855 456899999999732 333333 233 45688999999985
No 142
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=7.6e-23 Score=166.73 Aligned_cols=275 Identities=13% Similarity=0.139 Sum_probs=178.5
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe-cC
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST-TN 84 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d 84 (301)
.+..++|+|+ +++++++.... ...+.+.+|.++..+..+.. ......+...+..+++ ++++|++++ .+
T Consensus 51 ~p~~l~~spd---g~~l~~~~~~~--~~~~~v~~~~~~~~~g~~~~----~~~~~~~~~~p~~~~~--dg~~l~~~~~~~ 119 (361)
T 3scy_A 51 NPSYLIPSAD---GKFVYSVNEFS--KDQAAVSAFAFDKEKGTLHL----LNTQKTMGADPCYLTT--NGKNIVTANYSG 119 (361)
T ss_dssp CCCSEEECTT---SSEEEEEECCS--STTCEEEEEEEETTTTEEEE----EEEEECSSSCEEEEEE--CSSEEEEEETTT
T ss_pred CCceEEECCC---CCEEEEEEccC--CCCCcEEEEEEeCCCCcEEE----eeEeccCCCCcEEEEE--CCCEEEEEECCC
Confidence 3455788876 45555543211 13467899999886443321 1122334556778888 788887776 57
Q ss_pred CcEEEEEEcCCccccccccc-------cCCCCCCCCCeeEEEEeeCCCEEEEee-cCCeEEEEeCCCcce------e---
Q 022184 85 GGCKLFEVYGGATDINLLAK-------KMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRI------I--- 147 (301)
Q Consensus 85 ~~i~~w~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~------~--- 147 (301)
+.|.+|++............ ......+...+.+++|+|+|+++++++ .++.|.+|++..... +
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec
Confidence 89999999754332111100 000111234568899999999776655 478999998875431 1
Q ss_pred ----cccccCCccEEEEEecCCCcEEEEEe-CCCcEEEEeCCCCceE--EEEeec--CCCCeeEEEEccCCCcceEEEEE
Q 022184 148 ----LDEPKAHKSVLDMDFSLDSEFLATTS-TDGSARIWKTEDGVAW--TFLTRN--SDEKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 148 ----~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~ 218 (301)
.........+..++|+|||+++++++ .++.|.+||+.+++.. ..+... ....+..++|+|+|+++ .+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l----~v 275 (361)
T 3scy_A 200 GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYL----YA 275 (361)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEE----EE
T ss_pred ccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEE----EE
Confidence 11223345678999999999887777 6899999999877542 222211 12346799999999973 23
Q ss_pred EeCC-cceEEEEEcc--Cce--EeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEE--eCCCceeeccccccccCcc
Q 022184 219 QRGD-KALLAVYDIS--TWN--KIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVV--DVKKMEINHWSKRLHLGTS 290 (301)
Q Consensus 219 ~~~~-~~~i~~~d~~--~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~--~~~~~~~~~~~~~~~~~~~ 290 (301)
+... ++.|.+|++. +++ .+..+.. ...+..++|+|||++|++++ .++.|.+| |..++++.......+ ...
T Consensus 276 ~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-~~~ 353 (361)
T 3scy_A 276 SNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIK-VDK 353 (361)
T ss_dssp EECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEE-CSS
T ss_pred ECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeee-CCC
Confidence 4444 6899999985 343 3334443 55788999999999998887 56889995 555777665543334 557
Q ss_pred EEEEEEc
Q 022184 291 IALVEFC 297 (301)
Q Consensus 291 v~~~~~s 297 (301)
+.+++|.
T Consensus 354 p~~v~~~ 360 (361)
T 3scy_A 354 PVCLKFV 360 (361)
T ss_dssp EEEEEEE
T ss_pred CeEEEEc
Confidence 8999986
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=9.1e-24 Score=170.04 Aligned_cols=248 Identities=9% Similarity=0.003 Sum_probs=169.7
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec-CCcEEEEEEcCCccccccccccCCCCCC
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQD 111 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~ 111 (301)
.++.+.+|+.+... + ...+..+...+ .++|+|+++++++++. ++.|.+||+.+++....... .+
T Consensus 18 ~~~~v~~~d~~~~~--~------~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~------~~ 82 (331)
T 3u4y_A 18 HLRRISFFSTDTLE--I------LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ------EG 82 (331)
T ss_dssp GGTEEEEEETTTCC--E------EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE------EC
T ss_pred CCCeEEEEeCcccc--e------eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc------cC
Confidence 45666777654332 2 11223345556 9999999997776665 78999999987764111111 12
Q ss_pred CCCeeEEEEeeCCCEEEEeecCC---eEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEE-eCCCc-EEEEeCCCC
Q 022184 112 AGPQKCLSFSVDGSRFAAGGVDG---HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATT-STDGS-ARIWKTEDG 186 (301)
Q Consensus 112 ~~~v~~~~~s~~~~~l~~~~~dg---~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~-i~i~d~~~~ 186 (301)
..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. .....+++|+|+|++++++ ..++. +.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 23344499999999999665553 899999998887665543 4457899999999865555 55588 999998764
Q ss_pred ceEEEE---eecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE---eeeeeccCCCcEEEEEcCCCCEEE
Q 022184 187 VAWTFL---TRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK---IGHKRLLRKPASVLSISLDGKYLA 260 (301)
Q Consensus 187 ~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~ 260 (301)
..+... .......+..++|+|+|+++ +++...++.|.+||+.+++. +..+.. ...+..++|+|||++++
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l----~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFA----FVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEE----EEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEE
T ss_pred CcEeecCCccccCCCCccceEECCCCCEE----EEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEE
Confidence 433111 11223458999999999963 35566789999999998876 655553 45678899999999777
Q ss_pred Eee-CCCcEEEEeCCCcee--ecccccc---c--cCccEEEEEEccCCC
Q 022184 261 MGS-KDGDICVVDVKKMEI--NHWSKRL---H--LGTSIALVEFCPTQR 301 (301)
Q Consensus 261 ~~~-~d~~i~i~~~~~~~~--~~~~~~~---~--~~~~v~~~~~spdg~ 301 (301)
+++ .++.|.+||+.+++. +..+... + .......++|+|||+
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 285 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTET 285 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSS
T ss_pred EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCC
Confidence 665 467899999999877 2221110 1 012235689999985
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=1.2e-24 Score=188.36 Aligned_cols=252 Identities=10% Similarity=0.016 Sum_probs=180.4
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccC-CcceEEEECCCCCeEEEEec
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESE-GDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~ 83 (301)
.||++++|+|| ++.+|.++. .++.++||.++.. .. ..+..|. ..+..++|+|| +.+++++.
T Consensus 22 ~~~~~~~~~~D---G~~la~~s~-----~~g~~~lw~~~~g--~~-------~~lt~~~~~~~~~~~~spd-~~l~~~~~ 83 (582)
T 3o4h_A 22 VEKYSLQGVVD---GDKLLVVGF-----SEGSVNAYLYDGG--ET-------VKLNREPINSVLDPHYGVG-RVILVRDV 83 (582)
T ss_dssp SCEEEEEEEET---TTEEEEEEE-----ETTEEEEEEEETT--EE-------EECCSSCCSEECEECTTCS-EEEEEEEC
T ss_pred cchheeecCCC---CCeEEEEEc-----cCCceeEEEEcCC--Cc-------EeeecccccccccccCCCC-eEEEEecc
Confidence 57999999999 667777542 3677899997322 21 1233444 68999999999 77777665
Q ss_pred ---CCcEEEEEEcC--CccccccccccCCCCCCCCCeeEEEEeeCCCE-EEEeecCCeEEEEeCCCcceecccccCCccE
Q 022184 84 ---NGGCKLFEVYG--GATDINLLAKKMPPLQDAGPQKCLSFSVDGSR-FAAGGVDGHLRIMHWPSLRIILDEPKAHKSV 157 (301)
Q Consensus 84 ---d~~i~~w~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i 157 (301)
+....+|.+.. ...... . .........+|+|+++. +++...++.+.+||+.+++..... .+..
T Consensus 84 ~~g~~~~~l~~~~~~~~g~~~~-----l---~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~-~~~~-- 152 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRPGEEQR-----L---EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA-RLPG-- 152 (582)
T ss_dssp STTSCCEEEEEEETTSTTCCEE-----C---TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-EESS--
T ss_pred CCCCcceEEEEEeccCCCcccc-----c---cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-cCCC--
Confidence 45677877765 222111 1 11223456799998864 333444555669999888754333 2323
Q ss_pred EEEEecCCCcEEEEEeCC----CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcc--eEEEEEc
Q 022184 158 LDMDFSLDSEFLATTSTD----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA--LLAVYDI 231 (301)
Q Consensus 158 ~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~d~ 231 (301)
.+++|+|||++|++++.+ +.|++||+.+++.. .+..+ ...+..++|+|||+. ++++..++ .|++||+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~-~~~~~~~~~SpDG~~-----l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSG-EGSFSSASISPGMKV-----TAGLETAREARLVTVDP 225 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCS-SCEEEEEEECTTSCE-----EEEEECSSCEEEEEECT
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecC-CCccccceECCCCCE-----EEEccCCCeeEEEEEcC
Confidence 789999999999988877 78999999888765 44433 456899999999997 44566677 8999999
Q ss_pred cCceEeeeeeccCCCcEEEE--------EcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 232 STWNKIGHKRLLRKPASVLS--------ISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+++.. .+..+...+..++ |+|||.++++++.|+.+++|++ ++.... . ...+.+++|+ ||+
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~----~-~~~v~~~~~s-dg~ 294 (582)
T 3o4h_A 226 RDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEA----P-QGNHGRVVLW-RGK 294 (582)
T ss_dssp TTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECC----C-SSEEEEEEEE-TTE
T ss_pred CCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc----C-CCceEEEEec-CCE
Confidence 988876 6666666666666 9999999999999999999999 665542 2 4678899999 764
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=4.1e-23 Score=167.41 Aligned_cols=258 Identities=11% Similarity=0.076 Sum_probs=168.2
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe-cC
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST-TN 84 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d 84 (301)
.+..++|+|+ +++++++.. +.++.+.+|+++...... ...+..+...+..++|+|+|++|++++ .+
T Consensus 41 ~p~~~a~spd---g~l~~~~~~----~~~~~v~~~~~~~g~~~~------~~~~~~~~~~p~~~a~spdg~~l~~~~~~~ 107 (347)
T 3hfq_A 41 NPTYLALSAK---DCLYSVDKE----DDEGGIAAWQIDGQTAHK------LNTVVAPGTPPAYVAVDEARQLVYSANYHK 107 (347)
T ss_dssp CCCCEEECTT---CEEEEEEEE----TTEEEEEEEEEETTEEEE------EEEEEEESCCCSEEEEETTTTEEEEEETTT
T ss_pred CcceEEEccC---CeEEEEEec----CCCceEEEEEecCCcEEE------eeeeecCCCCCEEEEECCCCCEEEEEeCCC
Confidence 3456778866 344444221 134667777774332111 122345677899999999999998887 67
Q ss_pred CcEEEEEEcCCccccccccccCC-----CCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC-Ccceec--cccc-CCc
Q 022184 85 GGCKLFEVYGGATDINLLAKKMP-----PLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP-SLRIIL--DEPK-AHK 155 (301)
Q Consensus 85 ~~i~~w~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~-~~~~~~--~~~~-~~~ 155 (301)
+.+.+|++............... .......+.+++|+|+|+++++...++.|++|++. +++... .... ...
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 89999999642221111110000 00122458899999999966666678899999998 443321 1111 223
Q ss_pred cEEEEEecCCCcEEEE-EeCCCcEEEEeCCC--CceE--EEEeecCC-----CCeeEEEEccCCCcceEEEEEEeCCcce
Q 022184 156 SVLDMDFSLDSEFLAT-TSTDGSARIWKTED--GVAW--TFLTRNSD-----EKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~--~~~~--~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (301)
.+..++|+|||+++++ ...++.+.+|++.. ++.. ..+..... ..+..++|+|+|+++ .++...++.
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l----~v~~~~~~~ 263 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFL----YVSNRGYNT 263 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEE----EEEEETTTE
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEE----EEEeCCCCE
Confidence 6788999999996665 45788999999874 4432 22222111 347889999999973 244556889
Q ss_pred EEEEEccC---ceEeeeeeccCCCcEEEEEcCCCCEEEEeeCC-CcEEEE--eCCCceeec
Q 022184 226 LAVYDIST---WNKIGHKRLLRKPASVLSISLDGKYLAMGSKD-GDICVV--DVKKMEINH 280 (301)
Q Consensus 226 i~~~d~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-~~i~i~--~~~~~~~~~ 280 (301)
|.+||+.. .+.+..+..+...+..++|+|||++|++++.+ +.|.+| |..++++..
T Consensus 264 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 264 LAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 99999873 24445555556678999999999999888765 899999 556676554
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=6.3e-24 Score=170.97 Aligned_cols=246 Identities=10% Similarity=0.053 Sum_probs=165.5
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
.++ +++|+|+ ++.++++.. .++.+.+|+. ....+ ....+..+..+..+++|+|+|++++++..+
T Consensus 41 ~~~-~~~~s~d---g~~l~~~~~-----~~~~i~~~d~--~~~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 104 (331)
T 3u4y_A 41 DFV-DTAITSD---CSNVVVTSD-----FCQTLVQIET--QLEPP-----KVVAIQEGQSSMADVDITPDDQFAVTVTGL 104 (331)
T ss_dssp CEE-EEEECSS---SCEEEEEES-----TTCEEEEEEC--SSSSC-----EEEEEEECSSCCCCEEECTTSSEEEECCCS
T ss_pred Ccc-eEEEcCC---CCEEEEEeC-----CCCeEEEEEC--CCCce-----eEEecccCCCCccceEECCCCCEEEEecCC
Confidence 445 8999977 444444221 2344455544 33322 022344455555559999999999955544
Q ss_pred C---cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCe-EEEEeCCCccee----cccccCCc
Q 022184 85 G---GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGH-LRIMHWPSLRII----LDEPKAHK 155 (301)
Q Consensus 85 ~---~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~-i~v~d~~~~~~~----~~~~~~~~ 155 (301)
+ .|.+||+.+++.... +.......+++|+|+|++++++ ..++. |.+|++.....+ ........
T Consensus 105 ~~~~~i~v~d~~~~~~~~~--------~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 176 (331)
T 3u4y_A 105 NHPFNMQSYSFLKNKFIST--------IPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGT 176 (331)
T ss_dssp SSSCEEEEEETTTTEEEEE--------EECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSS
T ss_pred CCcccEEEEECCCCCeEEE--------EECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCC
Confidence 2 899999987765222 1233456899999999866555 45578 999998753332 11223345
Q ss_pred cEEEEEecCCCcEEEEE-eCCCcEEEEeCCCCce---EEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEc
Q 022184 156 SVLDMDFSLDSEFLATT-STDGSARIWKTEDGVA---WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI 231 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 231 (301)
.+..++|+|+|++++.+ ..++.|++||+++++. +..+..+ ..+..++|+|+|+++ .++...++.|.+||+
T Consensus 177 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l----~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 177 RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTV----YVLTESTVDVFNFNQ 250 (331)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEE----EEECSSEEEEEEEET
T ss_pred CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEE----EEEEcCCCEEEEEEC
Confidence 67899999999965554 4688999999999887 6666643 457899999999963 244556788999999
Q ss_pred cCceE--eeeeecc----CC---CcEEEEEcCCCCEEEEeeC-CCcEEEEeCCCceeec
Q 022184 232 STWNK--IGHKRLL----RK---PASVLSISLDGKYLAMGSK-DGDICVVDVKKMEINH 280 (301)
Q Consensus 232 ~~~~~--~~~~~~~----~~---~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~ 280 (301)
.+++. +..+... .. ....++|+||+++|++++. ++.|.+||+.......
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~ 309 (331)
T 3u4y_A 251 LSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGY 309 (331)
T ss_dssp TTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccc
Confidence 98876 3222211 11 2355899999998876655 5699999998766543
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=5.7e-25 Score=183.03 Aligned_cols=206 Identities=12% Similarity=0.069 Sum_probs=154.0
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccc-------ccccc-ccCCCCCCCCCeeEEEEeeCCCEEE----Ee
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD-------INLLA-KKMPPLQDAGPQKCLSFSVDGSRFA----AG 130 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~-------~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~----~~ 130 (301)
...+..+++++++.++++++.++ +++|+....... ..... .....+.+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 44688999999999999998888 999886532110 00000 0011123456799999999999999 78
Q ss_pred ecCCeEEEEeCCCc--------ce---ecccccCCccEEEEEecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEeecCCC
Q 022184 131 GVDGHLRIMHWPSL--------RI---ILDEPKAHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDE 198 (301)
Q Consensus 131 ~~dg~i~v~d~~~~--------~~---~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 198 (301)
+.|+.|++||++++ +. ...+.+|...|.+++|+|+ +.+|++++.|++|++||++++........+ ..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~-~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPS-TV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECG-GG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCC-CC
Confidence 88999999998765 11 2334457789999999997 789999999999999999998665555443 45
Q ss_pred CeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC-------CCcEEEEEcCCCCEEEEe-eCCC----
Q 022184 199 KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-------KPASVLSISLDGKYLAMG-SKDG---- 266 (301)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~-~~d~---- 266 (301)
.+.+++|+|+|++ +++++.|+.|++||.+ ++....+..+. ..+.+++|++++.++++. ..+|
T Consensus 194 ~v~~v~wspdg~~-----lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 194 AVTSVCWSPKGKQ-----LAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp CEEEEEECTTSSC-----EEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred ceeEEEEcCCCCE-----EEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 6999999999998 7889999999999998 44443333322 278999999998877554 3343
Q ss_pred --cEEEEeCCCc
Q 022184 267 --DICVVDVKKM 276 (301)
Q Consensus 267 --~i~i~~~~~~ 276 (301)
.+++|++...
T Consensus 268 ~~~v~i~~l~~~ 279 (434)
T 2oit_A 268 SPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEEECCCT
T ss_pred CCceEEEEeccC
Confidence 3899999764
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=8.6e-24 Score=167.04 Aligned_cols=232 Identities=16% Similarity=0.105 Sum_probs=164.0
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCC-CcceeeeCCceecccccc-CCcceEEEECCCCCeEEEE
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDP-KTTSVYTSPLVTYVFDES-EGDPMTIAVNPSGDDFVCS 81 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~ 81 (301)
...|.+++|+|+ +++++++. ++.+.+|+.+. ... ......| ...+.+++|+|++++|+++
T Consensus 41 ~~~v~~~~~spd---g~~l~~~~-------~~~i~~~d~~~~~~~--------~~~~~~~~~~~~~~~~~spdg~~l~~~ 102 (297)
T 2ojh_A 41 PELFEAPNWSPD---GKYLLLNS-------EGLLYRLSLAGDPSP--------EKVDTGFATICNNDHGISPDGALYAIS 102 (297)
T ss_dssp SSCCEEEEECTT---SSEEEEEE-------TTEEEEEESSSCCSC--------EECCCTTCCCBCSCCEECTTSSEEEEE
T ss_pred CcceEeeEECCC---CCEEEEEc-------CCeEEEEeCCCCCCc--------eEeccccccccccceEECCCCCEEEEE
Confidence 467899999988 56777642 34567776654 221 1123334 4778999999999999999
Q ss_pred e--cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEE-EeecCCeEEEEeCCC-cceecccccCCccE
Q 022184 82 T--TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHLRIMHWPS-LRIILDEPKAHKSV 157 (301)
Q Consensus 82 ~--~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~v~d~~~-~~~~~~~~~~~~~i 157 (301)
+ .++...||.++....... .+.....+..++|+|+++.|+ ++..++.+++|+++. ......+..+...+
T Consensus 103 ~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 175 (297)
T 2ojh_A 103 DKVEFGKSAIYLLPSTGGTPR-------LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRN 175 (297)
T ss_dssp ECTTTSSCEEEEEETTCCCCE-------ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCE
T ss_pred EeCCCCcceEEEEECCCCceE-------EeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCcc
Confidence 8 445677777754322111 112234588999999999887 677899999998632 22334555666789
Q ss_pred EEEEecCCCcEEEEEe-CCCcEEEEeCC-CCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCC-----------cc
Q 022184 158 LDMDFSLDSEFLATTS-TDGSARIWKTE-DGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD-----------KA 224 (301)
Q Consensus 158 ~~~~~~~~~~~l~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----------~~ 224 (301)
.+++|+|++++|+.++ .++.+++|+++ .+.....+..+ ...+..++|+|+++++ +.++. +.
T Consensus 176 ~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l-----~~~~~~~~~~~~~~~~~~ 249 (297)
T 2ojh_A 176 DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS-AYGDWFPHPSPSGDKV-----VFVSYDADVFDHPRDLDV 249 (297)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC-SEEEEEEEECTTSSEE-----EEEEEETTCCSCCSSEEE
T ss_pred ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC-CcccCCeEECCCCCEE-----EEEEcCCCCCcccccCce
Confidence 9999999999887766 58999999986 45555555443 3468899999999973 22222 36
Q ss_pred eEEEEEccCceE--eeeeeccCCCcEEEEEcCCCCEEEEeeCCC
Q 022184 225 LLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKDG 266 (301)
Q Consensus 225 ~i~~~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 266 (301)
.|.+||+.+++. +.....+...+..++|+|++++|++++.+.
T Consensus 250 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 250 RVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 799999988765 333446778899999999999999887654
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1.5e-23 Score=170.15 Aligned_cols=221 Identities=9% Similarity=0.016 Sum_probs=170.7
Q ss_pred CCcceEEEECCCCCeEEEEec-------CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTT-------NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDG 134 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~-------d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg 134 (301)
...+..++|+|+++++++++. ++.|.+||..+++...... ....+..++|+|++++++++ ..++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--------NDLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--------ESSCCCSEEEETTTTEEEEEETTTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--------cCCCcceEEECCCCCEEEEEecCCC
Confidence 456889999999998888774 5689999998776533322 22346789999999966555 5579
Q ss_pred eEEEEeCCCcceecccccCCc---------cEEEEEecCCCcEEEEEe--CCCcEEEEeCCCCceEEEEeecCCCCeeEE
Q 022184 135 HLRIMHWPSLRIILDEPKAHK---------SVLDMDFSLDSEFLATTS--TDGSARIWKTEDGVAWTFLTRNSDEKIELC 203 (301)
Q Consensus 135 ~i~v~d~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~ 203 (301)
.|.+||..+++.+..+..+.. .+.+++|+|+++++++++ .++.|.+||+++++....+... ...+..+
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~ 190 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-GKMSTGL 190 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-CTTCCCC
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-CCccceE
Confidence 999999999887666554332 278899999999877766 4788999999999988877633 2347889
Q ss_pred EEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec----cCCCcEEEEEcCCCCEEEEeeCC-CcEEEEeCCCcee
Q 022184 204 RFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL----LRKPASVLSISLDGKYLAMGSKD-GDICVVDVKKMEI 278 (301)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d-~~i~i~~~~~~~~ 278 (301)
+|+|+++. ++.+..++.|.+||..+++....+.. +...+..++|+|+++++++++.+ +.|.+||+.+++.
T Consensus 191 ~~s~dg~~-----l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 191 ALDSEGKR-----LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp EEETTTTE-----EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE
T ss_pred EECCCCCE-----EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 99999997 55667789999999999988766654 34567889999999988777654 8999999999988
Q ss_pred eccccccccCccEEEEEEccCCC
Q 022184 279 NHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 279 ~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+..+.... ...++|+|||+
T Consensus 266 ~~~~~~~~----~~~~~~s~dg~ 284 (353)
T 3vgz_A 266 LAKVAAPE----SLAVLFNPARN 284 (353)
T ss_dssp EEEEECSS----CCCEEEETTTT
T ss_pred EEEEEcCC----CceEEECCCCC
Confidence 77664322 25699999985
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=3.1e-22 Score=163.12 Aligned_cols=262 Identities=10% Similarity=0.126 Sum_probs=172.8
Q ss_pred cEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC----CcEEEEEEcCC
Q 022184 20 NLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN----GGCKLFEVYGG 95 (301)
Q Consensus 20 ~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----~~i~~w~~~~~ 95 (301)
..+.+|+-.. +.++.+.+|.++.....+.. .... +...+..++|+|+|++|++++.+ +.|.+|++...
T Consensus 14 ~~~~vg~y~~--~~~~~i~~~~~d~~~g~~~~----~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 14 LTMLVGTYTS--GNSKGIYTFRFNEETGESLP----LSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp EEEEEEECCS--SSCCEEEEEEEETTTCCEEE----EEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT
T ss_pred eEEEEEeccC--CCCCCEEEEEEeCCCCCEEE----eecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC
Confidence 3455554322 35678899999887655422 1112 67778899999999999998875 79999999864
Q ss_pred ccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-cCCeEEEEeCCCcceecccc--------------cCCccEEEE
Q 022184 96 ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRIILDEP--------------KAHKSVLDM 160 (301)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~--------------~~~~~i~~~ 160 (301)
.......... ..+......+++ ++++|++++ .++.|.+|++.....+.... .+...+.++
T Consensus 86 ~g~~~~~~~~---~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 160 (361)
T 3scy_A 86 KGTLHLLNTQ---KTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCV 160 (361)
T ss_dssp TTEEEEEEEE---ECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEE
T ss_pred CCcEEEeeEe---ccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEE
Confidence 2211111110 012345566777 888877776 57899999997543322211 112245889
Q ss_pred EecCCCcEEEEEe-CCCcEEEEeCCCCce------E------EEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEE
Q 022184 161 DFSLDSEFLATTS-TDGSARIWKTEDGVA------W------TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227 (301)
Q Consensus 161 ~~~~~~~~l~~~~-~d~~i~i~d~~~~~~------~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (301)
+|+|+|+++++++ .++.|++|++..... + ..........+..++|+|+|+++ .++...++.|.
T Consensus 161 ~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l----~v~~~~~~~v~ 236 (361)
T 3scy_A 161 RITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFA----YLINEIGGTVI 236 (361)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEE----EEEETTTCEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEE----EEEcCCCCeEE
Confidence 9999999766655 578999998875431 1 22333334458899999999963 24445688999
Q ss_pred EEEccCceEe--eeee---ccCCCcEEEEEcCCCCEEEEeeCC--CcEEEEeCC--Ccee--eccccccccCccEEEEEE
Q 022184 228 VYDISTWNKI--GHKR---LLRKPASVLSISLDGKYLAMGSKD--GDICVVDVK--KMEI--NHWSKRLHLGTSIALVEF 296 (301)
Q Consensus 228 ~~d~~~~~~~--~~~~---~~~~~v~~~~~s~~~~~l~~~~~d--~~i~i~~~~--~~~~--~~~~~~~~~~~~v~~~~~ 296 (301)
+||+.+++.. ..+. .+......++|+|||++|+++..+ +.|.+|++. +++. +..+. . ...+..++|
T Consensus 237 v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~--~-g~~~~~~~~ 313 (361)
T 3scy_A 237 AFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL--T-GIHPRNFII 313 (361)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--C-SSCCCEEEE
T ss_pred EEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--C-CCCCceEEE
Confidence 9999876542 2222 222456799999999999777654 889999996 4442 22221 1 346789999
Q ss_pred ccCCC
Q 022184 297 CPTQR 301 (301)
Q Consensus 297 spdg~ 301 (301)
+|||+
T Consensus 314 spdg~ 318 (361)
T 3scy_A 314 TPNGK 318 (361)
T ss_dssp CTTSC
T ss_pred CCCCC
Confidence 99986
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=1.3e-23 Score=193.17 Aligned_cols=222 Identities=14% Similarity=0.095 Sum_probs=169.4
Q ss_pred ccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEE
Q 022184 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 59 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 138 (301)
+.+|...+.++.|+++ ..+++++.++.+.+|.+......... +.+...+...+|+|||+.|+++. ++.|++
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~-------l~~~~~~~~~~~SpDG~~la~~~-~~~i~~ 269 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRK-------HTSFTDYYPRHLNTDGRRILFSK-GGSIYI 269 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEE-------CCCCCSSCEEEEEESSSCEEEEE-TTEEEE
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceE-------ecCCCCcceeeEcCCCCEEEEEe-CCEEEE
Confidence 4678889999999988 56667778899999998743221111 11223466789999999998885 899999
Q ss_pred EeCCCcceeccccc-----------CCccEEEEEec-CCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEc
Q 022184 139 MHWPSLRIILDEPK-----------AHKSVLDMDFS-LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFS 206 (301)
Q Consensus 139 ~d~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 206 (301)
||+...+. ..+.. +...+.+++|+ |||++|++++ ++.+.+|++..++... +..+....+..++|+
T Consensus 270 ~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s 346 (1045)
T 1k32_A 270 FNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD 346 (1045)
T ss_dssp ECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS
T ss_pred ecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc
Confidence 99854333 33333 22368899999 9999999888 7899999998876543 333333268899999
Q ss_pred cCCCcceEEEEEEeCCcceEE-EEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccccc
Q 022184 207 KDGTKPFLFCTVQRGDKALLA-VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285 (301)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~i~-~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 285 (301)
+|+. ++..+.+..+. +||+.+++... +..+...+..++|+|||++|++++.++.|++||+.+++..... ..
T Consensus 347 -dg~~-----l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~-~~ 418 (1045)
T 1k32_A 347 -TKVA-----FIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE-RS 418 (1045)
T ss_dssp -SEEE-----EEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-EC
T ss_pred -CCCe-----EEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec-cC
Confidence 9887 34445578888 99998776543 3366778999999999999999999999999999999877665 45
Q ss_pred ccCccEEEEEEccCCC
Q 022184 286 HLGTSIALVEFCPTQR 301 (301)
Q Consensus 286 ~~~~~v~~~~~spdg~ 301 (301)
| ...+.+++|||||+
T Consensus 419 ~-~~~v~~~~~SpDG~ 433 (1045)
T 1k32_A 419 R-EAMITDFTISDNSR 433 (1045)
T ss_dssp S-SSCCCCEEECTTSC
T ss_pred C-CCCccceEECCCCC
Confidence 7 78899999999996
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=3.3e-24 Score=189.67 Aligned_cols=220 Identities=15% Similarity=0.056 Sum_probs=159.5
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCC
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 143 (301)
..|.+++|+|+ ++++.+ .++.|++||+.+++... ...+...+..++|||||+.|+++ .++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~--------l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY--------LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE--------EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE--------ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence 56999999999 666665 45999999998765411 11234567789999999999985 589999999988
Q ss_pred -----cceecccccCCcc--------------EEEEEecCCCcEEEEEe-------------------------------
Q 022184 144 -----LRIILDEPKAHKS--------------VLDMDFSLDSEFLATTS------------------------------- 173 (301)
Q Consensus 144 -----~~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~------------------------------- 173 (301)
++.......+... +.+++|+|||++|++++
T Consensus 151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 7665433333332 47899999999999987
Q ss_pred --CCCcEEEEeCCCCceEEEEee-cCCCCeeEEEEccCCCcceEEEEEEeCCc-----ceEEEEEccCceEeeeee-c-c
Q 022184 174 --TDGSARIWKTEDGVAWTFLTR-NSDEKIELCRFSKDGTKPFLFCTVQRGDK-----ALLAVYDISTWNKIGHKR-L-L 243 (301)
Q Consensus 174 --~d~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~~-~-~ 243 (301)
.+..|++||+.+++....... .+...+..++|+|||+.+ +..+.+ ..|.+||+.+++....+. . .
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l-----~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENIL-----YVAEVNRAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEE-----EEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEE-----EEEEeCCCCCeeEEEEEECCCCceeeEEEEccC
Confidence 346799999998876544322 234468999999999973 332223 489999999883332222 1 2
Q ss_pred CC---CcEEEEEcC--CCCEEEEeeCCCcEEEEeCC-CceeeccccccccCccEEE-EEEccCCC
Q 022184 244 RK---PASVLSISL--DGKYLAMGSKDGDICVVDVK-KMEINHWSKRLHLGTSIAL-VEFCPTQR 301 (301)
Q Consensus 244 ~~---~v~~~~~s~--~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~-~~~spdg~ 301 (301)
.. .+..++|+| ||+++++++.|+.++||.++ +++.+..+ ..+ ...+.+ ++|+|||+
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l-~~~-~~~v~~~~~~spdg~ 368 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV-TKG-EWEVTNFAGFDPKGT 368 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC-CCS-SSCEEEEEEECTTSS
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec-CCC-CeEEEeeeEEcCCCC
Confidence 21 246789999 99999999999999999876 45555544 345 566776 89999985
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.8e-23 Score=168.53 Aligned_cols=221 Identities=13% Similarity=-0.004 Sum_probs=161.9
Q ss_pred cceEEEECCCCCeEE-EEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee------------
Q 022184 65 DPMTIAVNPSGDDFV-CSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG------------ 131 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~-~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------------ 131 (301)
.+..++|+|++++++ ++..++.|.+||+.+++....+.... ...+...+..++|+|+|++++++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST--PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB--TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC--cccccccccceEECCCCCEEEEEecccccccccccc
Confidence 488999999998765 44557899999998776533222110 000112567899999999998886
Q ss_pred cCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCc
Q 022184 132 VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211 (301)
Q Consensus 132 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 211 (301)
.++.|.+||+.+++....+.. ...+.+++|+|++++|+++ ++.|.+||+.+++....+..+.. ...+.|+|++..
T Consensus 113 ~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~ 187 (337)
T 1pby_B 113 QPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW--EAETYAQPDVLA 187 (337)
T ss_dssp CCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT--TTTTBCCCBCCC
T ss_pred cCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc--CCCceeCCCccE
Confidence 579999999998877655543 4467889999999988887 68999999999988777764431 123378999987
Q ss_pred ceEEEEEEeCCcc-----------------------eEEEEEccCceEe-eeeeccCCCcEEEEEcCCCCEEEEeeCCCc
Q 022184 212 PFLFCTVQRGDKA-----------------------LLAVYDISTWNKI-GHKRLLRKPASVLSISLDGKYLAMGSKDGD 267 (301)
Q Consensus 212 ~~~~~~~~~~~~~-----------------------~i~~~d~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 267 (301)
++ +.+..++ .|.+||+.+++.. ..+..+...+..++|+|++++++++ ++.
T Consensus 188 l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~ 261 (337)
T 1pby_B 188 VW----NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV 261 (337)
T ss_dssp CC----CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE
T ss_pred Ee----eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe
Confidence 42 2222222 5789999988764 2233445678889999999999988 689
Q ss_pred EEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 268 ICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 268 i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
|.+||+.+++.+..+.. ...+.+++|+|||+
T Consensus 262 v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~ 292 (337)
T 1pby_B 262 LESFDLEKNASIKRVPL---PHSYYSVNVSTDGS 292 (337)
T ss_dssp EEEEETTTTEEEEEEEC---SSCCCEEEECTTSC
T ss_pred EEEEECCCCcCcceecC---CCceeeEEECCCCC
Confidence 99999999988776532 34678999999985
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=2.1e-23 Score=168.14 Aligned_cols=244 Identities=13% Similarity=0.083 Sum_probs=170.1
Q ss_pred eeEEEeeeecCCCccEE-EecCCccccCCcCceeEeeeCCCcceeeeCCceeccccc---cCCcceEEEECCCCCeEEEE
Q 022184 6 TVTCGSWIKRPENVNLV-VLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDE---SEGDPMTIAVNPSGDDFVCS 81 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~-~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~~~ 81 (301)
.+.+++|+|+ ++.+ +.+. .++.+.+|+... ..... ...+.. |...+..++|+|+|++|+++
T Consensus 35 ~~~~~~~s~d---g~~l~v~~~------~~~~v~~~d~~~--~~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 99 (337)
T 1pby_B 35 TPMVPMVAPG---GRIAYATVN------KSESLVKIDLVT--GETLG----RIDLSTPEERVKSLFGAALSPDGKTLAIY 99 (337)
T ss_dssp CCCCEEECTT---SSEEEEEET------TTTEEEEEETTT--CCEEE----EEECCBTTEEEECTTCEEECTTSSEEEEE
T ss_pred CccceEEcCC---CCEEEEEeC------CCCeEEEEECCC--CCeEe----eEEcCCcccccccccceEECCCCCEEEEE
Confidence 4678889977 4333 4332 345566665543 22211 111111 23368899999999999888
Q ss_pred e------------cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecc
Q 022184 82 T------------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD 149 (301)
Q Consensus 82 ~------------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 149 (301)
. .++.|.+||+.+++....+ .....+.+++|+|++++|+++ ++.|++||+.+++....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~ 169 (337)
T 1pby_B 100 ESPVRLELTHFEVQPTRVALYDAETLSRRKAF--------EAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVED 169 (337)
T ss_dssp EEEEEECSSCEEECCCEEEEEETTTTEEEEEE--------ECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEE
T ss_pred ecccccccccccccCceEEEEECCCCcEEEEE--------eCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeee
Confidence 6 5799999999876542221 122456788999999988887 68899999998887655
Q ss_pred cccCCccEEEEEecCCCcEEEEEeCCC------------------------cEEEEeCCCCceEEEEeecCCCCeeEEEE
Q 022184 150 EPKAHKSVLDMDFSLDSEFLATTSTDG------------------------SARIWKTEDGVAWTFLTRNSDEKIELCRF 205 (301)
Q Consensus 150 ~~~~~~~i~~~~~~~~~~~l~~~~~d~------------------------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 205 (301)
+..+.. ...+.|+|+++.++..+.++ .|.+||+++++....-.......+..++|
T Consensus 170 ~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T 1pby_B 170 KPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAV 248 (337)
T ss_dssp ECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE
T ss_pred eecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEE
Confidence 543331 11237899988766554332 46899999988752222233345789999
Q ss_pred ccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccc
Q 022184 206 SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK 283 (301)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 283 (301)
+|+++++ +.+ ++.|.+||+.+++.+..+.. ...+.+++|+|+|++|++++.++.|.+||+.+++.+..+.
T Consensus 249 s~dg~~l-----~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 249 NPAKTRA-----FGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp CTTSSEE-----EEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEE-----EEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 9999973 333 68999999999887766654 3567899999999999999999999999999998777654
No 155
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=6.5e-24 Score=176.69 Aligned_cols=208 Identities=10% Similarity=-0.012 Sum_probs=143.7
Q ss_pred ccCCcceEEEECCCCCeEE----EEecCCcEEEEEEcCCcc----ccccccccCCCCCCCCCeeEEEEeeC-CCEEEEee
Q 022184 61 ESEGDPMTIAVNPSGDDFV----CSTTNGGCKLFEVYGGAT----DINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGG 131 (301)
Q Consensus 61 ~h~~~v~~~~~~~~~~~l~----~~~~d~~i~~w~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~ 131 (301)
.|...|.+++|+|++++|+ +++.|+.|++||+.+... ..+..........|...|.+++|+|+ +++|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3567899999999999999 778899999999976411 00000001112236789999999997 88999999
Q ss_pred cCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecC------CCCeeEEEE
Q 022184 132 VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS------DEKIELCRF 205 (301)
Q Consensus 132 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~~v~~~~~ 205 (301)
.||+|++||++++........|...|.+++|+|+|++|++++.|+.|++||++ ++....+..+. ...+.++.|
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEE
Confidence 99999999999887665566677899999999999999999999999999998 55555554332 126889999
Q ss_pred ccCCCcceEEEEEEeCCc------ceEEEEEccCceE-----eeeee-------ccCCCcEEEEEcCCCCEEEEeeC-CC
Q 022184 206 SKDGTKPFLFCTVQRGDK------ALLAVYDISTWNK-----IGHKR-------LLRKPASVLSISLDGKYLAMGSK-DG 266 (301)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~------~~i~~~d~~~~~~-----~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~-d~ 266 (301)
++++.+ + +.....+ ..+++||+++.+. ...+. ..+.+-..+.+-++.+++++++. .+
T Consensus 249 ~~~~~~--l--~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~ 324 (434)
T 2oit_A 249 IGTYVF--A--IVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAST 324 (434)
T ss_dssp EETTEE--E--EEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCS
T ss_pred ecCceE--E--EEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCC
Confidence 987654 2 1222223 3489999976421 11111 11223233344467677666654 34
Q ss_pred cEEEEeC
Q 022184 267 DICVVDV 273 (301)
Q Consensus 267 ~i~i~~~ 273 (301)
.|.++..
T Consensus 325 dv~vl~~ 331 (434)
T 2oit_A 325 EVSILAR 331 (434)
T ss_dssp BCEEEEE
T ss_pred ceeEEEe
Confidence 4555554
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=3.1e-23 Score=170.62 Aligned_cols=266 Identities=9% Similarity=0.031 Sum_probs=171.7
Q ss_pred EeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcEEE
Q 022184 10 GSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKL 89 (301)
Q Consensus 10 ~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~ 89 (301)
.+|+|| ++.+++... .++..+||.++..+... .....++...+..+.|+|+|+.|+.++.++.|++
T Consensus 41 ~~~SpD---g~~l~~~~~-----~~g~~~l~~~d~~~g~~------~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (388)
T 3pe7_A 41 KCFTRD---GSKLLFGGA-----FDGPWNYYLLDLNTQVA------TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMR 106 (388)
T ss_dssp CCBCTT---SCEEEEEEC-----TTSSCEEEEEETTTCEE------EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEE
T ss_pred ccCCCC---CCEEEEEEc-----CCCCceEEEEeCCCCce------EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEE
Confidence 679988 556666442 24455788888766544 2234455556667889999999999999999999
Q ss_pred EEEcCCccccccccccCCCCCCCCCeeEE--EEeeCCCEEEEe----------------------ecCCeEEEEeCCCcc
Q 022184 90 FEVYGGATDINLLAKKMPPLQDAGPQKCL--SFSVDGSRFAAG----------------------GVDGHLRIMHWPSLR 145 (301)
Q Consensus 90 w~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~l~~~----------------------~~dg~i~v~d~~~~~ 145 (301)
||+.+++...... .+...+... .++|++++++.. ..+..|++||+.+++
T Consensus 107 ~d~~~g~~~~~~~-------~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 107 VDLATLEENVVYQ-------VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp EETTTCCEEEEEE-------CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred EECCCCcceeeee-------chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 9998876422111 112223333 348899888742 234789999999886
Q ss_pred eecccccCCccEEEEEecC-CCcEEEEEeCC------CcEEEEeCCCCceEEEEeecCC-CCeeEEEEccCCCcceEEEE
Q 022184 146 IILDEPKAHKSVLDMDFSL-DSEFLATTSTD------GSARIWKTEDGVAWTFLTRNSD-EKIELCRFSKDGTKPFLFCT 217 (301)
Q Consensus 146 ~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~ 217 (301)
.. .+..+...+..++|+| ||+.|+....+ ..|.++|+..++.. .+..+.. ..+..++|+|||+.+++...
T Consensus 180 ~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 180 ST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp EE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred eE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCEEEEEec
Confidence 53 4445556789999999 99998887753 37888887665543 3333322 24778899999997432111
Q ss_pred EEeCCcceEEEEEccCceEeeeeeccC-----CCcEEEEEcCCCCEEEEe---------eCCCcEEEEeCCCceeecccc
Q 022184 218 VQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMG---------SKDGDICVVDVKKMEINHWSK 283 (301)
Q Consensus 218 ~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~---------~~d~~i~i~~~~~~~~~~~~~ 283 (301)
-.+..+..|.+||+.+++......... .....+.|+|||+.|+.. ..+..|++||+.+++.....
T Consensus 258 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~- 336 (388)
T 3pe7_A 258 LKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVA- 336 (388)
T ss_dssp ETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEE-
T ss_pred CCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEec-
Confidence 111122359999999887432211111 011224799999988864 44568999999998765443
Q ss_pred ccccCc-----------cEEEEEEccCCC
Q 022184 284 RLHLGT-----------SIALVEFCPTQR 301 (301)
Q Consensus 284 ~~~~~~-----------~v~~~~~spdg~ 301 (301)
.+ .. .+..++|+|||+
T Consensus 337 -~~-~~~~~~~~~~~~~~~~~~~~spDg~ 363 (388)
T 3pe7_A 337 -RH-DTSWKVFEGDRQVTHPHPSFTPDDK 363 (388)
T ss_dssp -EC-CCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred -cc-cCcccccccccccCCCCccCCCCCC
Confidence 23 33 478899999985
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=2e-22 Score=163.22 Aligned_cols=245 Identities=15% Similarity=0.075 Sum_probs=166.2
Q ss_pred EeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceecccccc-CCcceEEEECCCCCeEEE-EecCCcE
Q 022184 10 GSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDES-EGDPMTIAVNPSGDDFVC-STTNGGC 87 (301)
Q Consensus 10 ~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~-~~~d~~i 87 (301)
+++.++ ..+++++. .++.+.+|+... .... ..+..+ ...+..++|+|+++++++ ...++.|
T Consensus 5 ~~~~~~---~~~~v~~~------~~~~v~~~d~~~--~~~~------~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i 67 (349)
T 1jmx_B 5 PALKAG---HEYMIVTN------YPNNLHVVDVAS--DTVY------KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDI 67 (349)
T ss_dssp CCCCTT---CEEEEEEE------TTTEEEEEETTT--TEEE------EEEECSSCCSSCEEEECTTSSEEEEEETTTTEE
T ss_pred ccccCC---CEEEEEeC------CCCeEEEEECCC--CcEE------EEEecCCCCCCceeEECCCCCEEEEEeCCCCcE
Confidence 455544 45555544 455566666543 2221 112222 225789999999987654 4567899
Q ss_pred EEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC------------CeEEEEeCCCcceecc--cccC
Q 022184 88 KLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD------------GHLRIMHWPSLRIILD--EPKA 153 (301)
Q Consensus 88 ~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------------g~i~v~d~~~~~~~~~--~~~~ 153 (301)
.+||+.+++........... ......+..++|+|+|++|++++.+ +.|.+||+.+++.... ...+
T Consensus 68 ~~~d~~t~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 146 (349)
T 1jmx_B 68 YGIDLDTCKNTFHANLSSVP-GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM 146 (349)
T ss_dssp EEEETTTTEEEEEEESCCST-TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC
T ss_pred EEEeCCCCcEEEEEEccccc-ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC
Confidence 99999877653222110000 0001236789999999999998865 8999999988554322 1223
Q ss_pred CccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecC-------------------------------------
Q 022184 154 HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS------------------------------------- 196 (301)
Q Consensus 154 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------------------------------- 196 (301)
...+.+++|+|+++ +++++ +.|.+||+.+++....+..+.
T Consensus 147 ~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 223 (349)
T 1jmx_B 147 PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 223 (349)
T ss_dssp CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC----
T ss_pred CCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCc
Confidence 34688999999999 55554 449999999888776654321
Q ss_pred ------------------------------CCCeeEEEEcc-CCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCC
Q 022184 197 ------------------------------DEKIELCRFSK-DGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRK 245 (301)
Q Consensus 197 ------------------------------~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 245 (301)
...+..++|+| +++. ++.+ ++.|.+||+.+++.+..+.. ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~-----l~~~--~~~v~~~d~~~~~~~~~~~~-~~ 295 (349)
T 1jmx_B 224 QDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ-----IYGV--LNRLAKYDLKQRKLIKAANL-DH 295 (349)
T ss_dssp ---CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE-----EEEE--ESEEEEEETTTTEEEEEEEC-SS
T ss_pred CCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCE-----EEEE--cCeEEEEECccCeEEEEEcC-CC
Confidence 01245667789 8886 2333 78999999999887766653 34
Q ss_pred CcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccc
Q 022184 246 PASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK 283 (301)
Q Consensus 246 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 283 (301)
.+..++|+|++++|++++.++.|.+||+.+++.+..+.
T Consensus 296 ~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 296 TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred CccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence 57899999999999988889999999999998877653
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=3.2e-24 Score=190.12 Aligned_cols=220 Identities=9% Similarity=-0.024 Sum_probs=155.9
Q ss_pred eEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec---------CCeEE
Q 022184 67 MTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV---------DGHLR 137 (301)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~ 137 (301)
.+++|+|+|++++ .+.|+.|++||+.+++....+..... ....+.+++|||||++|++++. ++.|+
T Consensus 19 ~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 19 FFPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTM----KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHH----HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccc----cccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 3789999996544 45799999999988765222111000 0124789999999999998876 68999
Q ss_pred EEeCCCccee--cccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCC----------------
Q 022184 138 IMHWPSLRII--LDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEK---------------- 199 (301)
Q Consensus 138 v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---------------- 199 (301)
+||+.+++.+ ..+ ...+..++|+|||+.|+++. ++.|++||+.+++........+...
T Consensus 94 ~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 94 IYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp EEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred EEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence 9999988763 222 24688899999999999986 7899999998887654332222111
Q ss_pred -eeEEEEccCCCcceEEEEEEeCC----------------------------------cceEEEEEccCceEe-------
Q 022184 200 -IELCRFSKDGTKPFLFCTVQRGD----------------------------------KALLAVYDISTWNKI------- 237 (301)
Q Consensus 200 -v~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~i~~~d~~~~~~~------- 237 (301)
...++|+|||+.+ +.++. ...|.+||+.+++..
T Consensus 170 ~~~~~~wSPDG~~l-----a~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 244 (719)
T 1z68_A 170 TKYALWWSPNGKFL-----AYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV 244 (719)
T ss_dssp SSCCEEECTTSSEE-----EEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCC
T ss_pred CcccEEECCCCCEE-----EEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccC
Confidence 2489999999973 33222 227899999887642
Q ss_pred -eeeeccCCCcEEEEEcCCCCEEEEeeCC----CcEEEEe----CCCceeecccc---ccccCccEE-----EEEEccCC
Q 022184 238 -GHKRLLRKPASVLSISLDGKYLAMGSKD----GDICVVD----VKKMEINHWSK---RLHLGTSIA-----LVEFCPTQ 300 (301)
Q Consensus 238 -~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~~----~~~~~~~~~~~---~~~~~~~v~-----~~~~spdg 300 (301)
..+..+...+..++||||++++++.... ..|.+|| +.+++....+. ..| ...+. .++|+|||
T Consensus 245 ~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 245 PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESR-TGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECS-SSCSSSSSCCCCEECTTS
T ss_pred CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccC-CceEccccCCccEECCCC
Confidence 1123466678999999998877775432 2488999 88888776653 345 55565 88999998
Q ss_pred C
Q 022184 301 R 301 (301)
Q Consensus 301 ~ 301 (301)
+
T Consensus 324 ~ 324 (719)
T 1z68_A 324 I 324 (719)
T ss_dssp S
T ss_pred C
Confidence 5
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=5.6e-23 Score=177.91 Aligned_cols=215 Identities=13% Similarity=0.022 Sum_probs=153.5
Q ss_pred CCcceEEEECCCCCeEEEEec-CCcEEEEEEcCCccccccccccCCCCCCC-CCeeEEEEeeCCCEEEEeec---CCeEE
Q 022184 63 EGDPMTIAVNPSGDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQDA-GPQKCLSFSVDGSRFAAGGV---DGHLR 137 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~---dg~i~ 137 (301)
..+|.+++|+|||++||+++. ||+++||++++++. .....+. ..+..++|+|| +++++++. +....
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~--------~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET--------VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE--------EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc--------EeeecccccccccccCCCC-eEEEEeccCCCCcceE
Confidence 567999999999999998877 99999999966543 1112233 57899999999 77776664 45556
Q ss_pred EEeCCC---cceecccccCCccEEEEEecCCCcE-EEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcce
Q 022184 138 IMHWPS---LRIILDEPKAHKSVLDMDFSLDSEF-LATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (301)
Q Consensus 138 v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (301)
+|.++. +... .+... ..+...+|+|+++. +++.+.++.+.+||+.+++.......+ . .+++|+|||+.
T Consensus 92 l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~---~~~~~spDG~~-- 163 (582)
T 3o4h_A 92 LFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G---FGFVSDIRGDL-- 163 (582)
T ss_dssp EEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S---CEEEEEEETTE--
T ss_pred EEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C---ceEEECCCCCE--
Confidence 655432 2222 23222 23446688888863 333344455669999988765544432 2 78999999997
Q ss_pred EEEEEEeCCc----ceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCC--cEEEEeCCCceeecccccccc
Q 022184 214 LFCTVQRGDK----ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDG--DICVVDVKKMEINHWSKRLHL 287 (301)
Q Consensus 214 ~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~ 287 (301)
++.++.+ ..|++||+.+++.. .+..+...+..++|||||++|+++..++ .|++||+.+++.. .+ ..|
T Consensus 164 ---la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~-~~~- 236 (582)
T 3o4h_A 164 ---IAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL-ELP- 236 (582)
T ss_dssp ---EEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC-CCS-
T ss_pred ---EEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec-cCC-
Confidence 3433333 78999999887754 5666777889999999999999888888 8999999998877 43 455
Q ss_pred CccEEEEE--------EccCCC
Q 022184 288 GTSIALVE--------FCPTQR 301 (301)
Q Consensus 288 ~~~v~~~~--------~spdg~ 301 (301)
...+..++ |+|||+
T Consensus 237 ~~~~~~~~~~~~~~~~~spdg~ 258 (582)
T 3o4h_A 237 SKDFSSYRPTAITWLGYLPDGR 258 (582)
T ss_dssp CSHHHHHCCSEEEEEEECTTSC
T ss_pred CcChhhhhhccccceeEcCCCc
Confidence 55666666 999983
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=1e-22 Score=180.53 Aligned_cols=259 Identities=13% Similarity=0.106 Sum_probs=170.5
Q ss_pred EEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCC---cceEEEECCCCCeEEEEec-
Q 022184 8 TCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEG---DPMTIAVNPSGDDFVCSTT- 83 (301)
Q Consensus 8 ~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~- 83 (301)
..++|+|+ +.+++.+ .++.+.+|+.+.... ...+.+|.. .+.+++|||||++|++++.
T Consensus 19 ~~~~~s~d---g~~~~~~-------~d~~i~~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~ 80 (719)
T 1z68_A 19 FFPNWISG---QEYLHQS-------ADNNIVLYNIETGQS--------YTILSNRTMKSVNASNYGLSPDRQFVYLESDY 80 (719)
T ss_dssp CCCEESSS---SEEEEEC-------TTSCEEEEESSSCCE--------EEEECHHHHHTTTCSEEEECTTSSEEEEEEEE
T ss_pred CccEECCC---CeEEEEc-------CCCCEEEEEcCCCcE--------EEEEccccccccceeeEEECCCCCeEEEEecC
Confidence 36789987 4555542 355667776654331 112233322 4899999999999998876
Q ss_pred --------CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccC-C
Q 022184 84 --------NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA-H 154 (301)
Q Consensus 84 --------d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~ 154 (301)
++.|++||+++++.... .. ....+..++|||||+.|+++. ++.|++|++.+++........ .
T Consensus 81 ~~~~~~s~~~~i~~~d~~~g~~~~~------~~--l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~ 151 (719)
T 1z68_A 81 SKLWRYSYTATYYIYDLSNGEFVRG------NE--LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRE 151 (719)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCS------SC--CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBT
T ss_pred ceeEEeecceEEEEEECCCCccccc------ee--cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCc
Confidence 68999999987764100 11 124578899999999999986 789999999887764322121 1
Q ss_pred ccE-----------------EEEEecCCCcEEEEEeCCC----------------------------------cEEEEeC
Q 022184 155 KSV-----------------LDMDFSLDSEFLATTSTDG----------------------------------SARIWKT 183 (301)
Q Consensus 155 ~~i-----------------~~~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~ 183 (301)
..+ .+++|+|||++|++++.|. .|++||+
T Consensus 152 ~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~ 231 (719)
T 1z68_A 152 NKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT 231 (719)
T ss_dssp TTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES
T ss_pred CCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC
Confidence 222 4899999999999988652 7889999
Q ss_pred CCCceE--EEEe-----ecCCCCeeEEEEccCCCcceEEEEEEeC--CcceEEEEE----ccCceEeeee----eccCCC
Q 022184 184 EDGVAW--TFLT-----RNSDEKIELCRFSKDGTKPFLFCTVQRG--DKALLAVYD----ISTWNKIGHK----RLLRKP 246 (301)
Q Consensus 184 ~~~~~~--~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d----~~~~~~~~~~----~~~~~~ 246 (301)
.+++.. ..+. ..+...+..++|+||++. ++ ..... ....|.+|| ..+++..... ..+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~--~~-~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~ 308 (719)
T 1z68_A 232 TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERV--CL-QWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGW 308 (719)
T ss_dssp SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEE--EE-EEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSC
T ss_pred CCCCccceeEccCCccCCCCcceEEEeEEeCCCeE--EE-EEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCce
Confidence 887642 1221 123446899999999763 11 11222 235688999 8777765544 355555
Q ss_pred cE-----EEEEcCCCCEEEE--eeCCC--cEEEEeCCCceeeccccccccCccEEEEEEccCC
Q 022184 247 AS-----VLSISLDGKYLAM--GSKDG--DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 247 v~-----~~~~s~~~~~l~~--~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 300 (301)
+. .+.|+|||+.|+. ...+| .|.+|++.+++.... ..+ ...+..+.++ ||
T Consensus 309 ~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~l--t~~-~~~v~~~~~~-d~ 367 (719)
T 1z68_A 309 AGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQI--TSG-KWEAINIFRV-TQ 367 (719)
T ss_dssp SSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEEC--SCS-SSCEEEEEEE-CS
T ss_pred EccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEec--ccC-ceEEEEEEEE-eC
Confidence 65 7899999996654 33444 577888877664332 223 4456666665 54
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=2.3e-21 Score=172.21 Aligned_cols=249 Identities=11% Similarity=0.107 Sum_probs=166.7
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCC-----cceEEEECCCCCeEE
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEG-----DPMTIAVNPSGDDFV 79 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~ 79 (301)
...++++|+|+ +.+++.+ ++.+.+|+....... ..+.+|.. ....+.|||||++|+
T Consensus 17 ~~~~~~~w~~d---g~~~~~~--------~~~i~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~Spdg~~l~ 77 (740)
T 4a5s_A 17 LKLYSLRWISD---HEYLYKQ--------ENNILVFNAEYGNSS--------VFLENSTFDEFGHSINDYSISPDGQFIL 77 (740)
T ss_dssp CCCCCEEECSS---SEEEEEE--------TTEEEEEETTTCCEE--------EEECTTTTTTCCSCCCEEEECTTSSEEE
T ss_pred ccccccEECCC---CcEEEEc--------CCcEEEEECCCCceE--------EEEechhhhhhcccccceEECCCCCEEE
Confidence 34678999988 5677763 456677776544321 12333332 335589999999999
Q ss_pred EEecC---------CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccc
Q 022184 80 CSTTN---------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150 (301)
Q Consensus 80 ~~~~d---------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 150 (301)
.++.+ +.+.+||+.+++. .....+...+..++|||||+.|+.+. ++.|++|++.+++..+..
T Consensus 78 ~~~~~~~~~r~~~~~~~~~~d~~~~~~--------~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt 148 (740)
T 4a5s_A 78 LEYNYVKQWRHSYTASYDIYDLNKRQL--------ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRIT 148 (740)
T ss_dssp EEEEEEECSSSCEEEEEEEEETTTTEE--------CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC
T ss_pred EEECCeeeEEEccceEEEEEECCCCcE--------EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEc
Confidence 98875 5667999988764 22223456789999999999999885 789999999887754322
Q ss_pred c-cCCccE-----------------EEEEecCCCcEEEEEeCCC------------------------------------
Q 022184 151 P-KAHKSV-----------------LDMDFSLDSEFLATTSTDG------------------------------------ 176 (301)
Q Consensus 151 ~-~~~~~i-----------------~~~~~~~~~~~l~~~~~d~------------------------------------ 176 (301)
. ++...+ ..+.|+|||++|+..+.|.
T Consensus 149 ~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~ 228 (740)
T 4a5s_A 149 WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTV 228 (740)
T ss_dssp SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEE
T ss_pred CCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCee
Confidence 2 221222 3489999999999875332
Q ss_pred cEEEEeCCC---Cc--eEEEEee-----cCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce----Ee--eee
Q 022184 177 SARIWKTED---GV--AWTFLTR-----NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN----KI--GHK 240 (301)
Q Consensus 177 ~i~i~d~~~---~~--~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~--~~~ 240 (301)
+|++||+.+ ++ ....+.. .+...+..++|+|||+. +++.+.....+..|.+||+.+++ +. ..+
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~-~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERI-SLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEE-EEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeE-EEEEeCCCCCEEEEEEEECCCCccccceeEEEEe
Confidence 478899888 63 2333332 13446889999999984 22222333456689999999876 22 112
Q ss_pred --eccCCCcE-----EEEEcCCCCEEE-EeeC-C--CcEEEEeCCCceeeccc
Q 022184 241 --RLLRKPAS-----VLSISLDGKYLA-MGSK-D--GDICVVDVKKMEINHWS 282 (301)
Q Consensus 241 --~~~~~~v~-----~~~~s~~~~~l~-~~~~-d--~~i~i~~~~~~~~~~~~ 282 (301)
..+...+. .+.|+|||+.|+ ..+. + ..|++|++.+++.....
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecc
Confidence 33444443 789999999877 6653 3 46888999877665544
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=3e-22 Score=162.16 Aligned_cols=213 Identities=13% Similarity=0.069 Sum_probs=155.9
Q ss_pred EEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEE-EeecCCeEEEEeCCCcce
Q 022184 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHLRIMHWPSLRI 146 (301)
Q Consensus 68 ~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~v~d~~~~~~ 146 (301)
.++++++++++++++.++.|++||+.+++....+.. .....+..++|+|+++.++ +...++.|.+||+.+++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM------PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC------SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec------CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 356788888999999999999999987765322211 1112467899999998665 445689999999998887
Q ss_pred ecccccCC------ccEEEEEecCCCcEEEEEeCC------------CcEEEEeCCCCce---EEEEeecCCCCeeEEEE
Q 022184 147 ILDEPKAH------KSVLDMDFSLDSEFLATTSTD------------GSARIWKTEDGVA---WTFLTRNSDEKIELCRF 205 (301)
Q Consensus 147 ~~~~~~~~------~~i~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~ 205 (301)
...+.... ..+..++|+|+|++|++++.+ +.|.+||+.+++. +..+.. ...+.+++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~ 155 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRA 155 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeE
Confidence 65554322 237889999999999988865 8999999988543 233332 235889999
Q ss_pred ccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC-----------------------------------------
Q 022184 206 SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR----------------------------------------- 244 (301)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~----------------------------------------- 244 (301)
+|+++ ++ + .+. .|.+||..+++.+..+....
T Consensus 156 s~dg~-l~----~-~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 227 (349)
T 1jmx_B 156 ADDGS-LY----V-AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPA 227 (349)
T ss_dssp CTTSC-EE----E-ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------C
T ss_pred CCCCc-EE----E-ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcc
Confidence 99998 32 2 233 39999998887654443221
Q ss_pred ---------------------------CCcEEEEEcC-CCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEE
Q 022184 245 ---------------------------KPASVLSISL-DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF 296 (301)
Q Consensus 245 ---------------------------~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 296 (301)
..+..++|+| ++++++++ ++.|.+||+.+++.+..+.. ...+.+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~ 302 (349)
T 1jmx_B 228 TADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL---DHTYYCVAF 302 (349)
T ss_dssp CCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC---SSCCCEEEE
T ss_pred ccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC---CCCccceEE
Confidence 1345677889 99999988 78999999999988776642 345779999
Q ss_pred ccCCC
Q 022184 297 CPTQR 301 (301)
Q Consensus 297 spdg~ 301 (301)
+|||+
T Consensus 303 s~dg~ 307 (349)
T 1jmx_B 303 DKKGD 307 (349)
T ss_dssp CSSSS
T ss_pred CCCCC
Confidence 99985
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=2e-21 Score=158.49 Aligned_cols=252 Identities=9% Similarity=0.049 Sum_probs=163.8
Q ss_pred CceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEc-CCccccccccccCCCCCCCC
Q 022184 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVY-GGATDINLLAKKMPPLQDAG 113 (301)
Q Consensus 35 ~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~-~~~~~~~~~~~~~~~~~~~~ 113 (301)
+.|.+|.++.....+.... . ....+...+..++|+|+|++|++++.+ .|.+|++. +++... ..... ..+
T Consensus 14 ~~i~~~~~d~~~g~l~~~~--~-~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~-----~~g 83 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIK--R-TEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHP-----IGG 83 (365)
T ss_dssp CEEEEEEEETTTTEEEEEE--E-EECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEE-----CCS
T ss_pred CcEEEEEEECCCCCEEEee--E-EccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEee-----cCC
Confidence 3577888877665542210 0 001234568899999999999988888 89999997 554311 11100 112
Q ss_pred CeeEEEEeeCCCE--EEEee-------------cCCeEEEEeCC-Ccceecccc----cCCccEEEEEecCCCcEEEEEe
Q 022184 114 PQKCLSFSVDGSR--FAAGG-------------VDGHLRIMHWP-SLRIILDEP----KAHKSVLDMDFSLDSEFLATTS 173 (301)
Q Consensus 114 ~v~~~~~s~~~~~--l~~~~-------------~dg~i~v~d~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~ 173 (301)
.+..++|+|+|++ ++++. .++.+.+|++. .++....+. .+...+.+++|+|||++|+++.
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 3456899999994 44553 68999999997 455432222 1345789999999999888766
Q ss_pred C-CCcEEEEeCC-CCceEE--EEeec-CCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEcc--CceEe---eeeecc
Q 022184 174 T-DGSARIWKTE-DGVAWT--FLTRN-SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS--TWNKI---GHKRLL 243 (301)
Q Consensus 174 ~-d~~i~i~d~~-~~~~~~--~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~--~~~~~---~~~~~~ 243 (301)
. ++.|++||+. +++... .+... +...+..++|+|+|+++ .++...++.|.+|++. +++.. ..+...
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l----~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYL----YALMEAGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEE----EEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEE----EEEECCCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 4 6799999998 676532 23322 23458999999999973 2334457899999765 44432 112111
Q ss_pred -------CC------CcEEEE-EcCCCCEEEEeeCC-C-----cEEEEeCC-Cceeeccc--cccccCccEEEEEEcc--
Q 022184 244 -------RK------PASVLS-ISLDGKYLAMGSKD-G-----DICVVDVK-KMEINHWS--KRLHLGTSIALVEFCP-- 298 (301)
Q Consensus 244 -------~~------~v~~~~-~s~~~~~l~~~~~d-~-----~i~i~~~~-~~~~~~~~--~~~~~~~~v~~~~~sp-- 298 (301)
.. .+..++ |+|||++|++++.+ + .|.+|++. +++..... ...+ ...+..++|+|
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~-~~~~~~~a~sp~~ 318 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP-TSGGHSNAVSPCP 318 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS-SCCTTCCCEEECT
T ss_pred CCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC-CCCcccceecCCC
Confidence 11 478899 99999998877643 2 89999996 56544311 1223 34566789999
Q ss_pred -CCC
Q 022184 299 -TQR 301 (301)
Q Consensus 299 -dg~ 301 (301)
||+
T Consensus 319 ~dg~ 322 (365)
T 1jof_A 319 WSDE 322 (365)
T ss_dssp TCTT
T ss_pred cCCC
Confidence 774
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.89 E-value=5.7e-22 Score=176.03 Aligned_cols=231 Identities=9% Similarity=-0.034 Sum_probs=156.5
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC---------
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD--------- 133 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------- 133 (301)
.....++.|+|+|++++++ |+.|++||+.+++....+...... ........++|||||++|++++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD--EFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT--TCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhh--hhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 3446689999999888886 899999999888753222211111 111233558999999999998875
Q ss_pred CeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCC---------------
Q 022184 134 GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDE--------------- 198 (301)
Q Consensus 134 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------------- 198 (301)
+.+.+||+.+++.. .+..+...+..++|+|||+.||.+. |+.|++|++.+++...........
T Consensus 92 ~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 92 ASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred eEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 56779999998764 4556667899999999999999885 689999999888755432211111
Q ss_pred --CeeEEEEccCCCcceEEEEEE-----------e--------------------CCcceEEEEEccC---c---eEeee
Q 022184 199 --KIELCRFSKDGTKPFLFCTVQ-----------R--------------------GDKALLAVYDIST---W---NKIGH 239 (301)
Q Consensus 199 --~v~~~~~~~~~~~~~~~~~~~-----------~--------------------~~~~~i~~~d~~~---~---~~~~~ 239 (301)
....+.|||||+.+.+...-. . .....|.+||+.+ + +.. .
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~-~ 248 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSI-Q 248 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEE-E
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEE-E
Confidence 123589999999743221000 0 0112688999988 7 332 2
Q ss_pred ee------ccCCCcEEEEEcCCCCEEEEeeC----CCcEEEEeCCCce----eecc---ccccccCccEE-----EEEEc
Q 022184 240 KR------LLRKPASVLSISLDGKYLAMGSK----DGDICVVDVKKME----INHW---SKRLHLGTSIA-----LVEFC 297 (301)
Q Consensus 240 ~~------~~~~~v~~~~~s~~~~~l~~~~~----d~~i~i~~~~~~~----~~~~---~~~~~~~~~v~-----~~~~s 297 (301)
+. .+...+..++|+|||+.++.... +..|.+||+.+++ +... +...+ ...|. .++|+
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~-~~~v~~~~~~~p~fs 327 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST-TGWVGRFRPSEPHFT 327 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS-SSCSSSSSCCCCEEC
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC-CceEccCcCCCceEc
Confidence 22 25667889999999997666533 3479999999887 2221 11234 44443 78899
Q ss_pred cCCC
Q 022184 298 PTQR 301 (301)
Q Consensus 298 pdg~ 301 (301)
|||+
T Consensus 328 pDG~ 331 (740)
T 4a5s_A 328 LDGN 331 (740)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 9985
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=1e-20 Score=154.31 Aligned_cols=250 Identities=10% Similarity=0.048 Sum_probs=159.5
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCe--EEEEe-
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDD--FVCST- 82 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~~~~- 82 (301)
.+..++|+|+ +++++++.. + .+.+|+++..+ .+.. ......+ +.+.+++|+|+|++ ++++.
T Consensus 41 ~~~~~a~spd---g~~l~~~~~------~-~v~~~~~~~~g-~~~~----~~~~~~~-g~~~~~~~spdg~~l~~~~~~~ 104 (365)
T 1jof_A 41 PISWMTFDHE---RKNIYGAAM------K-KWSSFAVKSPT-EIVH----EASHPIG-GHPRANDADTNTRAIFLLAAKQ 104 (365)
T ss_dssp CCSEEEECTT---SSEEEEEEB------T-EEEEEEEEETT-EEEE----EEEEECC-SSGGGGCTTSCCEEEEEEECSS
T ss_pred CCcEEEECCC---CCEEEEEcc------c-eEEEEEECCCC-CEEE----eeEeecC-CCCccEEECCCCCEEEEEEecC
Confidence 5667888877 455554332 2 67888876322 2211 0011111 23667999999995 44543
Q ss_pred ------------cCCcEEEEEEcC-CccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec-CCeEEEEeCC-Cccee
Q 022184 83 ------------TNGGCKLFEVYG-GATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-DGHLRIMHWP-SLRII 147 (301)
Q Consensus 83 ------------~d~~i~~w~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~v~d~~-~~~~~ 147 (301)
.++.+.+|++.. ++......... ..+...+.+++|+|||++|+++.. ++.|++|++. +++..
T Consensus 105 ~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 105 PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE---YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE---CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred CcceeccceeecCCceEEEEccCCCCcCcceEeeEE---eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 688999999974 33211111000 123457899999999998887764 6799999998 66542
Q ss_pred --cccc--cCCccEEEEEecCCCcEEEEEeC-CCcEEEEeCC--CCceEE---EEeec-C-----CC------CeeEEE-
Q 022184 148 --LDEP--KAHKSVLDMDFSLDSEFLATTST-DGSARIWKTE--DGVAWT---FLTRN-S-----DE------KIELCR- 204 (301)
Q Consensus 148 --~~~~--~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~--~~~~~~---~~~~~-~-----~~------~v~~~~- 204 (301)
..+. .+...+..++|+|||+++++++. ++.|.+|++. +++... .+... . .. .+..++
T Consensus 182 ~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 261 (365)
T 1jof_A 182 LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCA 261 (365)
T ss_dssp EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEE
T ss_pred EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEE
Confidence 2222 12456899999999998887764 6899999865 455432 22211 1 11 378899
Q ss_pred EccCCCcceEEEEEEeCCc----ceEEEEEcc-CceEee---eeeccCCCcEEEEEcC---CCCEEEEeeCC-CcEEEEe
Q 022184 205 FSKDGTKPFLFCTVQRGDK----ALLAVYDIS-TWNKIG---HKRLLRKPASVLSISL---DGKYLAMGSKD-GDICVVD 272 (301)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~----~~i~~~d~~-~~~~~~---~~~~~~~~v~~~~~s~---~~~~l~~~~~d-~~i~i~~ 272 (301)
|+|||++++ +...+.+ +.|.+|++. +++... ....+...+..++|+| ||++|++++.+ +.|.+|+
T Consensus 262 ~spdG~~l~---v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 262 LTFSGKYMF---ASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp ECTTSSEEE---EEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred ECCCCCEEE---EECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 999999732 1222222 289999986 555432 1223445567899999 89999999865 8999999
Q ss_pred CCCce
Q 022184 273 VKKME 277 (301)
Q Consensus 273 ~~~~~ 277 (301)
++...
T Consensus 339 ~~~~~ 343 (365)
T 1jof_A 339 WKDEF 343 (365)
T ss_dssp EETTE
T ss_pred Echhh
Confidence 87653
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=2.4e-19 Score=145.72 Aligned_cols=249 Identities=11% Similarity=0.083 Sum_probs=158.1
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe----------cCCcEEEEEEcCCccccccc
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLL 102 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~~w~~~~~~~~~~~~ 102 (301)
.++.+.+|+ .....+. ..+..+..+ .++|+|+|++++++. .++.|.+||..+.+....+.
T Consensus 29 ~d~~v~v~D--~~t~~~~------~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~ 98 (361)
T 2oiz_A 29 TESRVHVYD--YTNGKFL------GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS 98 (361)
T ss_dssp GGCEEEEEE--TTTCCEE------EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE
T ss_pred ccCeEEEEE--CCCCeEE------EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE
Confidence 355566664 4333332 223334444 899999999999886 35679999988766533332
Q ss_pred cccCCCCCCCCCeeEEEEeeCCCEEEEeec--CCeEEEEeCCCcceecc-cccCCccEEEEEecCCC-cEEEEEeCCCcE
Q 022184 103 AKKMPPLQDAGPQKCLSFSVDGSRFAAGGV--DGHLRIMHWPSLRIILD-EPKAHKSVLDMDFSLDS-EFLATTSTDGSA 178 (301)
Q Consensus 103 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i 178 (301)
... ....+......++++|||++|+++.. ++.|.+||+.+++.+.. +... ....+.+.|++ ..+++.+.||.+
T Consensus 99 ~~~-~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~ 175 (361)
T 2oiz_A 99 LPP-KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGL 175 (361)
T ss_dssp ECT-TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSE
T ss_pred cCc-cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcE
Confidence 111 11112345678999999999998874 58999999998877655 4321 11123334433 233444444444
Q ss_pred EEEeC------------------------------------------------CCCceE--EEEeecC---------CCC
Q 022184 179 RIWKT------------------------------------------------EDGVAW--TFLTRNS---------DEK 199 (301)
Q Consensus 179 ~i~d~------------------------------------------------~~~~~~--~~~~~~~---------~~~ 199 (301)
.+|++ ...... ..+.... ...
T Consensus 176 ~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g 255 (361)
T 2oiz_A 176 LTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGG 255 (361)
T ss_dssp EEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECC
T ss_pred EEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCC
Confidence 44443 322111 1110000 001
Q ss_pred eeEEEEccCCCcceEEEEEE-eC-------CcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEE
Q 022184 200 IELCRFSKDGTKPFLFCTVQ-RG-------DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVV 271 (301)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~-~~-------~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~ 271 (301)
...++|+|+++.+|+ ... .+ ....|.+||+.+++.+..+..+. +..++|+|||++|++++. +.|.+|
T Consensus 256 ~~~~a~~~dg~~lyv--~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~ 330 (361)
T 2oiz_A 256 YNLVGLHRASGRMYV--FMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVY 330 (361)
T ss_dssp SSCEEEETTTTEEEE--EEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEE
T ss_pred eeEEEEecCCCeEEE--EEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEE
Confidence 123788999887442 111 11 14589999999999998888766 899999999999999887 999999
Q ss_pred eCCCc--eeeccccccccCccEEEEEEccCCC
Q 022184 272 DVKKM--EINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 272 ~~~~~--~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
|..++ +.+..+. .. ......++++|||+
T Consensus 331 D~~t~~l~~~~~i~-~~-G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 331 DISQPEPKLLRTIE-GA-AEASLQVQFHPVGG 360 (361)
T ss_dssp ECSSSSCEEEEEET-TS-CSSEEEEEECCCSC
T ss_pred ECCCCcceeeEEec-cC-CCCcEEEEecCCCC
Confidence 99999 8887752 33 56788999999986
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.86 E-value=1.9e-19 Score=158.15 Aligned_cols=263 Identities=14% Similarity=0.039 Sum_probs=167.8
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcce---------EEEEC--
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPM---------TIAVN-- 72 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~-- 72 (301)
...+...+|+++ ..+++.+. ...++...||.....+. ...+..|...+. ...|+
T Consensus 23 ~~~~~~~~~s~~---~~~~~~~~----~~~~~~~~l~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~S 87 (662)
T 3azo_A 23 SGRPACVGAVGD---EVWWVAPR----PAEAGRATLVRRRADGA--------EESALPAPWNVRNRVFEYSGFPWAGVPR 87 (662)
T ss_dssp CSCCEEEEEETT---EEEEEEEE----TTTTTEEEEEEECTTSC--------EEESSCTTCCBCCCGGGTCCCCEEEECC
T ss_pred CCccceeEEcCC---eEEEEecC----cccCCcEEEEEECCCCC--------cceeCCCCccccccccccCCccceeeee
Confidence 456788888855 33444321 01345668888743321 122334444444 55565
Q ss_pred CCCCe-EEEEec-CCcEEEEEEc--C-CccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC----------CeEE
Q 022184 73 PSGDD-FVCSTT-NGGCKLFEVY--G-GATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----------GHLR 137 (301)
Q Consensus 73 ~~~~~-l~~~~~-d~~i~~w~~~--~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------g~i~ 137 (301)
|||+. |+.++. +..|+++++. + ++. ..+.. .....+...+..++|+|||+.|++++.+ ..|+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~--~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTP--VSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSC--CCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccC--CccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 99998 776654 3445555543 1 221 11111 0000134567899999999999998876 5899
Q ss_pred EEeCCC------cceecccc-cCCccEEEEEecCCCcEEEEEeCC--------CcEEEEeCC-CC--ceEEEEeecCCCC
Q 022184 138 IMHWPS------LRIILDEP-KAHKSVLDMDFSLDSEFLATTSTD--------GSARIWKTE-DG--VAWTFLTRNSDEK 199 (301)
Q Consensus 138 v~d~~~------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~-~~--~~~~~~~~~~~~~ 199 (301)
+||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ .....+...+...
T Consensus 165 ~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 165 AVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA 243 (662)
T ss_dssp EEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC
T ss_pred EEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce
Confidence 999987 554 3444 555678889999999999988755 379999998 56 2344444444456
Q ss_pred eeEEEEccCCCcceEEEEEEeCCcc--eEEEEEccCceEeeeeeccCCC--------cEEEEEcCCCCEEEEeeCCCcEE
Q 022184 200 IELCRFSKDGTKPFLFCTVQRGDKA--LLAVYDISTWNKIGHKRLLRKP--------ASVLSISLDGKYLAMGSKDGDIC 269 (301)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~~~~~d~~i~ 269 (301)
+..++|+|||+. ++++..++ .|.+||+.+++.......+... +..++|+|+++++++++. +.++
T Consensus 244 ~~~~~~spdg~l-----~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (662)
T 3azo_A 244 IAQAEWAPDGSL-----IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAV 317 (662)
T ss_dssp EEEEEECTTSCE-----EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCE
T ss_pred EcceEECCCCeE-----EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccE
Confidence 899999999994 45556666 7777887666654333322211 467899999999999988 9988
Q ss_pred EE--eCCCceeeccccccccCccEEEE
Q 022184 270 VV--DVKKMEINHWSKRLHLGTSIALV 294 (301)
Q Consensus 270 i~--~~~~~~~~~~~~~~~~~~~v~~~ 294 (301)
|| |+.+++.. .+ ..+ ...+..+
T Consensus 318 l~~~d~~~~~~~-~l-~~~-~~~~~~~ 341 (662)
T 3azo_A 318 LGILDPESGELV-DA-AGP-WTEWAAT 341 (662)
T ss_dssp EEEEETTTTEEE-EC-CSS-CCEEEEE
T ss_pred EEEEECCCCcEE-Ee-cCC-CCeEEEE
Confidence 88 66666643 33 344 5566665
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=6.9e-21 Score=156.87 Aligned_cols=266 Identities=8% Similarity=0.024 Sum_probs=164.1
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCc
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 86 (301)
+.+++|+|+ ++.+++... .++...+|.++..+..... ...++......+.|+|+|++|+.++.++.
T Consensus 38 ~~~~~~Spd---G~~l~~~~~-----~~g~~~l~~~d~~~~~~~~------l~~~~~~~~~~~~~spdg~~l~~~~~~~~ 103 (396)
T 3c5m_A 38 FYQKCFTQD---GKKLLFAGD-----FDGNRNYYLLNLETQQAVQ------LTEGKGDNTFGGFISTDERAFFYVKNELN 103 (396)
T ss_dssp TTSCCBCTT---SCEEEEEEC-----TTSSCEEEEEETTTTEEEE------CCCSSCBCTTTCEECTTSSEEEEEETTTE
T ss_pred eecCcCCCC---CCEEEEEEe-----cCCCceEEEEECCCCcEEE------eecCCCCccccceECCCCCEEEEEEcCCc
Confidence 566788877 555555332 1223356766665543311 12222222334889999999999999989
Q ss_pred EEEEEEcCCccccccccccCCCCCCCCCeeE-------------------EEEeeCCCEEEEe-----ecCCeEEEEeCC
Q 022184 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKC-------------------LSFSVDGSRFAAG-----GVDGHLRIMHWP 142 (301)
Q Consensus 87 i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~s~~~~~l~~~-----~~dg~i~v~d~~ 142 (301)
|++|++.+++....... +...... +.|+|+++.++.. ..+..|++||+.
T Consensus 104 l~~~d~~~~~~~~~~~~-------~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~ 176 (396)
T 3c5m_A 104 LMKVDLETLEEQVIYTV-------DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIE 176 (396)
T ss_dssp EEEEETTTCCEEEEEEC-------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETT
T ss_pred EEEEECCCCCcEEEEec-------ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECC
Confidence 99999887653211110 0011111 3467777766554 356789999998
Q ss_pred CcceecccccCCccEEEEEecC-CCcEEEEEeCC------CcEEEEeCCCCceEEEEeecC-CCCeeEEEEccCCCcceE
Q 022184 143 SLRIILDEPKAHKSVLDMDFSL-DSEFLATTSTD------GSARIWKTEDGVAWTFLTRNS-DEKIELCRFSKDGTKPFL 214 (301)
Q Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~ 214 (301)
+++... +..+...+..+.|+| +++.|+..+.+ ..|.+||+..++... +..+. ...+..++|+|+|+.+++
T Consensus 177 ~g~~~~-~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~ 254 (396)
T 3c5m_A 177 TGELEV-IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAY 254 (396)
T ss_dssp TCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEE
T ss_pred CCcEEe-eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEE
Confidence 877543 334556789999999 78877776643 368889987665333 22222 224778999999997332
Q ss_pred EEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcC-CCCEEEEee----------------CCCcEEEEeCCCce
Q 022184 215 FCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISL-DGKYLAMGS----------------KDGDICVVDVKKME 277 (301)
Q Consensus 215 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~----------------~d~~i~i~~~~~~~ 277 (301)
.....+...+.|.+||+.+++...... .. ... +.|+| ||+++++++ .+..|++||+.+++
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 255 VSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp EEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred EecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 111111122559999998876543222 12 233 89999 999888764 34689999998887
Q ss_pred eeccccccccCc-----------cEEEEEEccCCC
Q 022184 278 INHWSKRLHLGT-----------SIALVEFCPTQR 301 (301)
Q Consensus 278 ~~~~~~~~~~~~-----------~v~~~~~spdg~ 301 (301)
..... .+ .. .+..++|+|||+
T Consensus 332 ~~~l~--~~-~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 332 AQKLC--KH-STSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp CCEEE--EC-CCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred eEEcc--CC-CCccccccccccCCCCCceEccCCC
Confidence 54332 22 22 256788999985
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=1.9e-19 Score=147.91 Aligned_cols=200 Identities=12% Similarity=-0.029 Sum_probs=135.4
Q ss_pred EEECCCCCeEEEEec-CCc--EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc
Q 022184 69 IAVNPSGDDFVCSTT-NGG--CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR 145 (301)
Q Consensus 69 ~~~~~~~~~l~~~~~-d~~--i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~ 145 (301)
.+|+|||++|+.++. ++. |.+||+.+++..... ..+...+..+.|+|||+.|++++.++.|++||+.+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-------~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT-------EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC-------CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee-------eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 889999999998887 664 777777666542111 1122333457899999999999999999999999887
Q ss_pred eecccccCCccEEEE--EecCCCcEEEEEe----------------------CCCcEEEEeCCCCceEEEEeecCCCCee
Q 022184 146 IILDEPKAHKSVLDM--DFSLDSEFLATTS----------------------TDGSARIWKTEDGVAWTFLTRNSDEKIE 201 (301)
Q Consensus 146 ~~~~~~~~~~~i~~~--~~~~~~~~l~~~~----------------------~d~~i~i~d~~~~~~~~~~~~~~~~~v~ 201 (301)
.......+...+... .++|++++++... .+..|.+||+.+++...... + ...+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~-~~~~~ 191 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-E-NQWLG 191 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-E-SSCEE
T ss_pred ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec-C-Ccccc
Confidence 654444444444333 3489999887432 34679999999887654443 2 33588
Q ss_pred EEEEcc-CCCcceEEEEEEeCC---cceEEEEEccCceEeeeeeccC--CCcEEEEEcCCCCEEEEeeCC-C----cEEE
Q 022184 202 LCRFSK-DGTKPFLFCTVQRGD---KALLAVYDISTWNKIGHKRLLR--KPASVLSISLDGKYLAMGSKD-G----DICV 270 (301)
Q Consensus 202 ~~~~~~-~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~d-~----~i~i 270 (301)
.++|+| +|+.+.+ ...... ...|.++|...++.. .+..+. ..+..++|+|||+.|+..+.+ + .|++
T Consensus 192 ~~~~sp~dg~~l~~--~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (388)
T 3pe7_A 192 HPIYRPYDDSTVAF--CHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYS 268 (388)
T ss_dssp EEEEETTEEEEEEE--EECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEE
T ss_pred ccEECCCCCCEEEE--EEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEE
Confidence 999999 9987321 111111 447888888765443 233333 247788999999988665432 2 3999
Q ss_pred EeCCCceeec
Q 022184 271 VDVKKMEINH 280 (301)
Q Consensus 271 ~~~~~~~~~~ 280 (301)
||+.+++...
T Consensus 269 ~d~~~g~~~~ 278 (388)
T 3pe7_A 269 ADPETLENRQ 278 (388)
T ss_dssp ECTTTCCEEE
T ss_pred EecCCCceEE
Confidence 9999887543
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=4.4e-18 Score=136.75 Aligned_cols=255 Identities=11% Similarity=0.118 Sum_probs=173.3
Q ss_pred ceeEEEeeeecCCCccEEEecCCcccc------------------CCcCceeEeeeCCCcceeeeCCceeccccccCCcc
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRAS------------------SSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDP 66 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v 66 (301)
+.+.++++.++ +++++++...... ..++ .|+.+++....+.. ..-.++...+
T Consensus 24 ~~v~~va~d~~---G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~d~~~g~~~~-----~~~~~~~~~p 93 (329)
T 3fvz_A 24 GQVSGVALDSK---NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEED--TILVIDPNNAEILQ-----SSGKNLFYLP 93 (329)
T ss_dssp SCEEEEEECTT---CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSC--CEEEECTTTCCEEE-----EECTTTCSSE
T ss_pred CCceEEEECCC---CCEEEEeCCCCeEEeeccCcceeecccccccccCC--cEEEEECCCCeEEe-----ccCCCccCCc
Confidence 56889999977 5666665443210 0112 35555555433321 1112455678
Q ss_pred eEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccC---CCCCCCCCeeEEEEee-CCCEEEEee-cCCeEEEEeC
Q 022184 67 MTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKM---PPLQDAGPQKCLSFSV-DGSRFAAGG-VDGHLRIMHW 141 (301)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~-~~~~l~~~~-~dg~i~v~d~ 141 (301)
..++++|+|+.+++...++.|++|+.+............. ....+......++++| +++++++.+ .++.|++|+
T Consensus 94 ~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 9999999999888887889999999765421111111000 0012334688999999 788777776 689999999
Q ss_pred CCcceeccccc----------CCccEEEEEecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEeec-CCCCeeEEEEcc--
Q 022184 142 PSLRIILDEPK----------AHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRN-SDEKIELCRFSK-- 207 (301)
Q Consensus 142 ~~~~~~~~~~~----------~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~-- 207 (301)
.+++.+..+.. +......++++|+ +.++++...++.|++||..+++.+..+... ....+..++|+|
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~ 252 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGF 252 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTE
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCE
Confidence 45655544421 1124889999998 777777778899999999988888877532 334588899999
Q ss_pred ----CCCcceEEEEEEeCCcceEEEEEccCceEeeeee---ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 208 ----DGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR---LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 208 ----~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
+++. .++...+..|.+||..+++.+..+. .+...+..++++|+|.++++...+++|++|++..
T Consensus 253 ~~~~~g~~-----~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 253 LFAVNGKP-----YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEECCC-----CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEeCCCE-----EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3321 1223345689999999998877663 4456689999999998888888899999999854
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=4.4e-18 Score=136.74 Aligned_cols=227 Identities=10% Similarity=-0.012 Sum_probs=164.3
Q ss_pred CCcceEEEECCCCCeEEEEecC------------------------CcEEEEEEcCCccccccccccCCCCCCCCCeeEE
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTN------------------------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCL 118 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d------------------------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 118 (301)
-+.+.+++++|+|+.+++...+ ++|.+||..+++...... ..+...+..+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~------~~~~~~p~gi 96 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG------KNLFYLPHGL 96 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC------TTTCSSEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC------CCccCCceEE
Confidence 5679999999999988887766 469999987666422111 0123467899
Q ss_pred EEeeCCCEEEEeecCCeEEEEeCCCcc-eeccc---------ccCCccEEEEEecC-CCcEEEEEe-CCCcEEEEeCCCC
Q 022184 119 SFSVDGSRFAAGGVDGHLRIMHWPSLR-IILDE---------PKAHKSVLDMDFSL-DSEFLATTS-TDGSARIWKTEDG 186 (301)
Q Consensus 119 ~~s~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~d~~i~i~d~~~~ 186 (301)
+++|+|+++++...++.|++||..... .+..+ ..+......++++| +++++++.+ .++.|++|| .++
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 999999988888888999999975442 23322 12233688999999 788888876 689999999 567
Q ss_pred ceEEEEeecCC---------CCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee--ccCCCcEEEEEcC-
Q 022184 187 VAWTFLTRNSD---------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR--LLRKPASVLSISL- 254 (301)
Q Consensus 187 ~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~s~- 254 (301)
+.+..+..... ..+..++++|++..+ .++...++.|++||..+++.+..+. .+...+..++|+|
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l----~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg 251 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL----CVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPG 251 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEE----EEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETT
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE----EEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCC
Confidence 77666643211 237899999994442 4667788999999999888776663 3446788999999
Q ss_pred -----CCCEEEEeeCCCcEEEEeCCCceeecccc--ccccCccEEEEEEccCCC
Q 022184 255 -----DGKYLAMGSKDGDICVVDVKKMEINHWSK--RLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 255 -----~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~~~v~~~~~spdg~ 301 (301)
+|+..++...+..|++|+..+++.+..+. ..+ ...+.+++++|||+
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~-~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH-FDMPHDIVASEDGT 304 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSC-CSSEEEEEECTTSE
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCc-cCCeeEEEECCCCC
Confidence 33333333445689999999998887653 234 56789999999983
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=2.5e-17 Score=129.68 Aligned_cols=243 Identities=11% Similarity=0.047 Sum_probs=159.6
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEE-CCCCCeEEEEec-
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAV-NPSGDDFVCSTT- 83 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~l~~~~~- 83 (301)
.+.++++.++ +.++++.. .++.+.+| ++.......... .....+|...+..+++ .++++.+++...
T Consensus 31 ~p~~v~~~~~---g~l~v~~~------~~~~i~~~--d~~g~~~~~~~~-~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~ 98 (286)
T 1q7f_A 31 EPSGVAVNAQ---NDIIVADT------NNHRIQIF--DKEGRFKFQFGE-CGKRDSQLLYPNRVAVVRNSGDIIVTERSP 98 (286)
T ss_dssp CEEEEEECTT---CCEEEEEG------GGTEEEEE--CTTSCEEEEECC-BSSSTTCBSSEEEEEEETTTTEEEEEECGG
T ss_pred CCceEEECCC---CCEEEEEC------CCCEEEEE--CCCCcEEEEecc-cCCCcccccCceEEEEEcCCCeEEEEcCCC
Confidence 4677888765 44555433 23344454 444433211110 0011245567899999 567766666533
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccc--cCCccEEEEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEP--KAHKSVLDMD 161 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~i~~~~ 161 (301)
++.|++|+ .+++....+. ..+...+..++++|+|+++++...++.|.+||.. ++....+. .+...+..++
T Consensus 99 ~~~i~~~d-~~g~~~~~~~------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFG------ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVV 170 (286)
T ss_dssp GCEEEEEC-TTSCEEEEEC------TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEE
T ss_pred CCEEEEEC-CCCcEEEEec------CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEE
Confidence 78899999 4443321111 1123567899999999988877778999999964 44444332 2334689999
Q ss_pred ecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecC-CCCeeEEEEccCCCcceEEEEEEeCCcc-eEEEEEccCceEeee
Q 022184 162 FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS-DEKIELCRFSKDGTKPFLFCTVQRGDKA-LLAVYDISTWNKIGH 239 (301)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~d~~~~~~~~~ 239 (301)
++|+++++++...++.|++||. .++.+..+.... ...+..++++++|+. .++...++ .|.+||.. ++.+..
T Consensus 171 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l-----~v~~~~~~~~i~~~~~~-g~~~~~ 243 (286)
T 1q7f_A 171 VNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEI-----LIADNHNNFNLTIFTQD-GQLISA 243 (286)
T ss_dssp ECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCE-----EEEECSSSCEEEEECTT-SCEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCE-----EEEeCCCCEEEEEECCC-CCEEEE
Confidence 9999998888888899999997 455555554321 235889999999974 45555564 99999964 555555
Q ss_pred eeccC--CCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCc
Q 022184 240 KRLLR--KPASVLSISLDGKYLAMGSKDGDICVVDVKKM 276 (301)
Q Consensus 240 ~~~~~--~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~ 276 (301)
+..+. ..+..++++|+|+++++ +.++.|++|++...
T Consensus 244 ~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 244 LESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 54443 24778999999987666 67899999998654
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=1.5e-17 Score=130.88 Aligned_cols=231 Identities=9% Similarity=0.020 Sum_probs=160.1
Q ss_pred cccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEe-eCCCEEEEeec-CCeEE
Q 022184 60 DESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFS-VDGSRFAAGGV-DGHLR 137 (301)
Q Consensus 60 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~-dg~i~ 137 (301)
.++...+.+++++++++.+++...++.|.+||.+.. ....+.. ......+...+..++++ ++++++++... ++.|+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~-~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-FKFQFGE-CGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC-EEEEECC-BSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc-EEEEecc-cCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 355677999999999998888788899999997633 2111111 00111223467899995 67766665543 78999
Q ss_pred EEeCCCcceeccccc-CCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee-cCCCCeeEEEEccCCCcceEE
Q 022184 138 IMHWPSLRIILDEPK-AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR-NSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 138 v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 215 (301)
+|| .+++.+..+.. +...+..++++|+++++++...++.|.+||.. ++.+..+.. .....+..++++|+|+.
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l---- 177 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEI---- 177 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEE----
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCE----
Confidence 999 55665544432 23568999999999988887788999999964 555555542 22235889999999874
Q ss_pred EEEEeCCcceEEEEEccCceEeeeeecc--CCCcEEEEEcCCCCEEEEeeCCC-cEEEEeCCCceeeccccccccCccEE
Q 022184 216 CTVQRGDKALLAVYDISTWNKIGHKRLL--RKPASVLSISLDGKYLAMGSKDG-DICVVDVKKMEINHWSKRLHLGTSIA 292 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~d~-~i~i~~~~~~~~~~~~~~~~~~~~v~ 292 (301)
.++...++.|.+||... +.+..+... ...+..++++|+|+++++...++ .|.+|+.. ++.+..+........+.
T Consensus 178 -~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 254 (286)
T 1q7f_A 178 -FISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCF 254 (286)
T ss_dssp -EEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEE
T ss_pred -EEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcce
Confidence 45666788999999854 444444333 25688999999999888887776 99999964 44444442221123478
Q ss_pred EEEEccCCC
Q 022184 293 LVEFCPTQR 301 (301)
Q Consensus 293 ~~~~spdg~ 301 (301)
+++++|||+
T Consensus 255 ~i~~~~~g~ 263 (286)
T 1q7f_A 255 DVALMDDGS 263 (286)
T ss_dssp EEEEETTTE
T ss_pred eEEECCCCc
Confidence 999999984
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=7.1e-18 Score=135.76 Aligned_cols=262 Identities=12% Similarity=0.016 Sum_probs=171.1
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
..+|.+++|+++ ...++.. ..++.++.|. ... ...+..+...+.+++|+|+|+.++++..
T Consensus 5 ~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 64 (333)
T 2dg1_A 5 QQDLPTLFYSGK---SNSAVPI------ISESELQTIT----AEP-------WLEISKKGLQLEGLNFDRQGQLFLLDVF 64 (333)
T ss_dssp -CCCCBCCSCGG---GGCSSCC------CCGGGSCEEE----CEE-------EEEEESSCCCEEEEEECTTSCEEEEETT
T ss_pred ccccceeeecCC---ccceeEE------eecccCcccc----cce-------eEEEeccCccccCcEECCCCCEEEEECC
Confidence 456778888866 2222221 1345556661 111 1224455667899999999997778888
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC----CeEEEEeCCCcceecccc--cCCccE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----GHLRIMHWPSLRIILDEP--KAHKSV 157 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~v~d~~~~~~~~~~~--~~~~~i 157 (301)
++.|.+||.++++...... .+...+.+++++|+++++++...+ +.|.+||.++++....+. .....+
T Consensus 65 ~~~i~~~d~~~~~~~~~~~-------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 137 (333)
T 2dg1_A 65 EGNIFKINPETKEIKRPFV-------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCI 137 (333)
T ss_dssp TCEEEEECTTTCCEEEEEE-------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCE
T ss_pred CCEEEEEeCCCCcEEEEee-------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcc
Confidence 8999999987665421110 134678999999999887777666 689999988766432221 233578
Q ss_pred EEEEecCCCcEEEEEeC------CCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEc
Q 022184 158 LDMDFSLDSEFLATTST------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI 231 (301)
Q Consensus 158 ~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 231 (301)
.+++++|+|+++++... .+.|..+|..+++...... .. ..+..++|+|+++.+ .++...++.|.+||+
T Consensus 138 ~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~i~~~~dg~~l----~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 138 DDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NI-SVANGIALSTDEKVL----WVTETTANRLHRIAL 211 (333)
T ss_dssp EEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EE-SSEEEEEECTTSSEE----EEEEGGGTEEEEEEE
T ss_pred cceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CC-CcccceEECCCCCEE----EEEeCCCCeEEEEEe
Confidence 99999999987776653 2556667765555433322 21 247899999999863 234456789999998
Q ss_pred cC-ceEeee-----eecc--CCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCc------cEEEEEEc
Q 022184 232 ST-WNKIGH-----KRLL--RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGT------SIALVEFC 297 (301)
Q Consensus 232 ~~-~~~~~~-----~~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~------~v~~~~~s 297 (301)
.+ +..+.. .... ...+..++++++|+++++...++.|.+||.. ++.+..+. .+ .. .+.+++|+
T Consensus 212 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~-~~-~~~~g~~~~~~~~~~~ 288 (333)
T 2dg1_A 212 EDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQIL-IP-GRDEGHMLRSTHPQFI 288 (333)
T ss_dssp CTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEE-CT-TGGGTCSCBCCEEEEC
T ss_pred cCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEE-cC-CCccccccCcceEEEC
Confidence 63 222111 1111 1357789999999988887778899999984 55444432 22 21 68899999
Q ss_pred cCCC
Q 022184 298 PTQR 301 (301)
Q Consensus 298 pdg~ 301 (301)
|||+
T Consensus 289 ~dg~ 292 (333)
T 2dg1_A 289 PGTN 292 (333)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 9873
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=2.1e-18 Score=152.53 Aligned_cols=226 Identities=12% Similarity=0.050 Sum_probs=156.8
Q ss_pred ccCCcceEEEECCCCCeEEEEecCC-----cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCe
Q 022184 61 ESEGDPMTIAVNPSGDDFVCSTTNG-----GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (301)
Q Consensus 61 ~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (301)
+|...+..++|||||++||.+..++ .|++||+.+++...... ....+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--------~~~~~~~~~wspDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--------ERVKFSCMAWTHDGKGMFYNAYPQQ 193 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE--------EEECSCCEEECTTSSEEEEEECCCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc--------cCcccceEEEEeCCCEEEEEEECCc
Confidence 4555788999999999998776543 89999998876532211 1122567999999999999887765
Q ss_pred ----------------EEEEeCCCccee----cccccCCccEEEEEecCCCcEEEEEeC-----CCcEEEEeCCC-----
Q 022184 136 ----------------LRIMHWPSLRII----LDEPKAHKSVLDMDFSLDSEFLATTST-----DGSARIWKTED----- 185 (301)
Q Consensus 136 ----------------i~v~d~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~----- 185 (301)
|++|++.+++.. .....+...+..+.|+|||++|+..+. +..|.+||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc
Confidence 999999876532 122223345789999999999887764 56899999986
Q ss_pred -Cc-eEEEEeecCCCCeeEEEEccCCCcceEEEEEEe--CCcceEEEEEccCceE--eeeeeccCC--CcEEEEEcCCCC
Q 022184 186 -GV-AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR--GDKALLAVYDISTWNK--IGHKRLLRK--PASVLSISLDGK 257 (301)
Q Consensus 186 -~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~d~~~~~~--~~~~~~~~~--~v~~~~~s~~~~ 257 (301)
+. ....+..+... +.. .|+|+|+.+++ .+. .....|.+||+.++.. ...+..+.. .+..++|++++.
T Consensus 274 ~~~~~~~~l~~~~~~-~~~-~~s~dg~~l~~---~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 274 TGILKWVKLIDNFEG-EYD-YVTNEGTVFTF---KTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp CSSCCCEEEECSSSS-CEE-EEEEETTEEEE---EECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE
T ss_pred CCccceEEeeCCCCc-EEE-EEeccCCEEEE---EECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE
Confidence 43 34555544332 333 58999987432 221 1245799999987642 233333433 577899998888
Q ss_pred EEEEeeCCCc--EEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 258 YLAMGSKDGD--ICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 258 ~l~~~~~d~~--i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
++++...++. |.+|++.+++.+..+ ..+ ...+..++++||++
T Consensus 349 lv~~~~~~g~~~l~~~~~~~g~~~~~l-~~~-~~~v~~~~~s~d~~ 392 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQLHDLATGALLKIF-PLE-VGSVVGYSGQKKDT 392 (710)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEE-CCC-SSEEEEEECCTTCS
T ss_pred EEEEEEECCEEEEEEEECCCCCEEEec-CCC-CceEEEEecCCCCC
Confidence 8888888874 667787677655554 345 67789999999873
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=8.6e-19 Score=153.96 Aligned_cols=229 Identities=10% Similarity=0.003 Sum_probs=154.5
Q ss_pred eccccccCCcceEEEECCCCCeEEEE--ecCCcEEEEEEcCCccccccccccCCCCCCCCCee---------EEEEe--e
Q 022184 56 TYVFDESEGDPMTIAVNPSGDDFVCS--TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK---------CLSFS--V 122 (301)
Q Consensus 56 ~~~~~~h~~~v~~~~~~~~~~~l~~~--~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~s--~ 122 (301)
...+.+|...+..++|++++-+++.. +.++...||....+.....+. .+...+. ...|+ |
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~~~~~~SP 88 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESAL-------PAPWNVRNRVFEYSGFPWAGVPRP 88 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESS-------CTTCCBCCCGGGTCCCCEEEECCS
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeC-------CCCccccccccccCCccceeeeec
Confidence 44567889999999999876666666 457889999974433222211 1222223 45565 9
Q ss_pred CCCE-EEEeec-CCeEEEEeCC--C-cceeccccc-----CCccEEEEEecCCCcEEEEEeCC----------CcEEEEe
Q 022184 123 DGSR-FAAGGV-DGHLRIMHWP--S-LRIILDEPK-----AHKSVLDMDFSLDSEFLATTSTD----------GSARIWK 182 (301)
Q Consensus 123 ~~~~-l~~~~~-dg~i~v~d~~--~-~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d----------~~i~i~d 182 (301)
||+. |+.++. +..|.++++. . ++. ..+.. +...+..++|+|||+.|++++.+ ..|++||
T Consensus 89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 89 AGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred CCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 9998 776654 5677777775 2 433 34444 45678899999999999998876 5899999
Q ss_pred CCC------CceEEEEe-ecCCCCeeEEEEccCCCcceEEEEEEeC--------CcceEEEEEcc-Cc---eEeeeeecc
Q 022184 183 TED------GVAWTFLT-RNSDEKIELCRFSKDGTKPFLFCTVQRG--------DKALLAVYDIS-TW---NKIGHKRLL 243 (301)
Q Consensus 183 ~~~------~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~d~~-~~---~~~~~~~~~ 243 (301)
+.+ ++.. .+. .+ ...+..++|+|||+++ +..+ ....|.+||+. ++ +.......+
T Consensus 168 ~~~~~~~~~~~~~-~l~~~~-~~~~~~~~~SpDG~~l-----a~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 168 LDGSAAADRSAVR-ELSDDA-HRFVTGPRLSPDGRQA-----VWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp TTSTTTTCGGGSE-ESSCSC-SSEECCCEECTTSSEE-----EEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred CCCCccccCCcee-EEEecC-CCcccCceECCCCCEE-----EEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 988 5543 333 32 3457889999999973 3222 12589999998 56 443333444
Q ss_pred CCCcEEEEEcCCCCEEEEeeCCC--cEEEEeCCCceeeccccccccCcc--------EEEEEEccCCC
Q 022184 244 RKPASVLSISLDGKYLAMGSKDG--DICVVDVKKMEINHWSKRLHLGTS--------IALVEFCPTQR 301 (301)
Q Consensus 244 ~~~v~~~~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~--------v~~~~~spdg~ 301 (301)
...+..+.|+|||++++++..++ .|.+||+.+++...... .+ ... +..++|+|+|+
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~-~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-RE-EEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CS-SBSSCCCCSTTCCSEEECTTSC
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-cc-ccccCccccccCceEeEeCCCE
Confidence 67899999999999888887787 67777776776554432 22 211 56788888764
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=7.3e-18 Score=136.42 Aligned_cols=208 Identities=13% Similarity=0.096 Sum_probs=138.3
Q ss_pred CcceEEEECCCCCeEEEEecC---Cc--EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC-----
Q 022184 64 GDPMTIAVNPSGDDFVCSTTN---GG--CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----- 133 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d---~~--i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----- 133 (301)
..+..++|+|||++|+.++.+ +. |.+|++.+++.. .+. .+.. +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~-~l~-------~~~~-~~~~~wspdg~~l~~~~~~~~~~~ 129 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK-KIL-------EAKN-IRSLEWNEDSRKLLIVGFKRREDE 129 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE-EEE-------EESE-EEEEEECTTSSEEEEEEECCCC--
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE-EEE-------cCCC-ccceeECCCCCEEEEEEccCCCcC
Confidence 458899999999999987654 33 666676655431 111 1223 8899999999999887642
Q ss_pred ----------------------CeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCC-------cEEEEeCC
Q 022184 134 ----------------------GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG-------SARIWKTE 184 (301)
Q Consensus 134 ----------------------g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~i~i~d~~ 184 (301)
..|++||+.+++.+..+.. . .+..++|+||| +++++..+. ...||.+.
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 130 DFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp -------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred CcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 5799999988776334433 3 78899999999 777776542 34555544
Q ss_pred CCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeC-----CcceEEEEEccCceEeeeeeccCCCcEE-EEEcCCCCE
Q 022184 185 DGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG-----DKALLAVYDISTWNKIGHKRLLRKPASV-LSISLDGKY 258 (301)
Q Consensus 185 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~ 258 (301)
+++ ...+..+ ..+..+ +|+|+.+++ ..... ....|.+|| +++.......+...+.. +.|+ |+ +
T Consensus 207 ~~~-~~~l~~~--~~~~~~--spdg~~l~~--~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~ 275 (347)
T 2gop_A 207 DGK-EEKMFEK--VSFYAV--DSDGERILL--YGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-V 275 (347)
T ss_dssp TTE-EEEEEEE--ESEEEE--EECSSCEEE--EECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-E
T ss_pred CCc-eEEeccC--cceeeE--CCCCCEEEE--EEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-E
Confidence 444 3444333 334444 999997321 11111 135788898 55544444445567776 8999 88 8
Q ss_pred EEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEcc
Q 022184 259 LAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP 298 (301)
Q Consensus 259 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~sp 298 (301)
+++++.++.++|| +.+++..... .+ ...|.+++|+|
T Consensus 276 ~~~~~~~~~~~l~-~~~g~~~~~~--~~-~~~v~~~~~s~ 311 (347)
T 2gop_A 276 YFTLFEEGSVNLY-IWDGEIKPIA--KG-RHWIMGFDVDE 311 (347)
T ss_dssp EEEEEETTEEEEE-EESSSEEEEE--CS-SSEEEEEEESS
T ss_pred EEEEecCCcEEEE-EcCCceEEEe--cC-CCeEEeeeeeC
Confidence 8999999999999 8766554332 34 57788999987
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.80 E-value=1.5e-16 Score=125.90 Aligned_cols=239 Identities=10% Similarity=0.073 Sum_probs=160.1
Q ss_pred eEEEeeeecCCCcc-EEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC
Q 022184 7 VTCGSWIKRPENVN-LVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (301)
Q Consensus 7 v~~~~w~~~~~~~~-~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 85 (301)
..+++|.++ ++ +++++.. .+ .|+.|++.+. .. .+..+...+.+++++|+|+++++...++
T Consensus 30 ~eg~~~d~~---g~~l~~~~~~------~~--~i~~~~~~~~-~~-------~~~~~~~~~~~l~~~~dg~l~v~~~~~~ 90 (296)
T 3e5z_A 30 TEGPVYVPA---RSAVIFSDVR------QN--RTWAWSDDGQ-LS-------PEMHPSHHQNGHCLNKQGHLIACSHGLR 90 (296)
T ss_dssp EEEEEEEGG---GTEEEEEEGG------GT--EEEEEETTSC-EE-------EEESSCSSEEEEEECTTCCEEEEETTTT
T ss_pred ccCCeEeCC---CCEEEEEeCC------CC--EEEEEECCCC-eE-------EEECCCCCcceeeECCCCcEEEEecCCC
Confidence 467889977 54 5555442 23 4555555543 21 1334567799999999999877776678
Q ss_pred cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEE----ee-------------cCCeEEEEeCCCcceec
Q 022184 86 GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAA----GG-------------VDGHLRIMHWPSLRIIL 148 (301)
Q Consensus 86 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~-------------~dg~i~v~d~~~~~~~~ 148 (301)
.|.+||..+++........ .......+..++++|+|+++++ ++ ..+.|..++.. ++. .
T Consensus 91 ~i~~~d~~~g~~~~~~~~~---~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~ 165 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSF---EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-S 165 (296)
T ss_dssp EEEEECSTTCCEEEEECEE---TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-E
T ss_pred eEEEEcCCCCcEEEEeecc---CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-E
Confidence 8999998666542211100 0011235678999999998887 33 13456666654 433 3
Q ss_pred ccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCC-CCce---EEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcc
Q 022184 149 DEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE-DGVA---WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (301)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 224 (301)
.+..+......++|+|+++.+++.+.++.|.+|++. +++. ...+ ......+..++++++|+. ..+. ++
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l------~v~~-~~ 237 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLI------WASA-GD 237 (296)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCE------EEEE-TT
T ss_pred EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCE------EEEc-CC
Confidence 334445567899999999988777778999999997 4544 2333 223345778999999984 2223 77
Q ss_pred eEEEEEccCceEeeeeeccCCCcEEEEE-cCCCCEEEEeeCCCcEEEEeCCCceeec
Q 022184 225 LLAVYDISTWNKIGHKRLLRKPASVLSI-SLDGKYLAMGSKDGDICVVDVKKMEINH 280 (301)
Q Consensus 225 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~d~~i~i~~~~~~~~~~ 280 (301)
.|.+||.. ++.+..+..+.. +.+++| +|+++.|++++.+ .+.-++.++.++.+
T Consensus 238 ~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 238 GVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLEH 291 (296)
T ss_dssp EEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCCC
T ss_pred eEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccccc
Confidence 89999987 666666766666 899999 5899999988875 46666776665543
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=3e-17 Score=129.89 Aligned_cols=220 Identities=12% Similarity=-0.014 Sum_probs=152.5
Q ss_pred ccccCCcceEEEECCCCC-eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEE
Q 022184 59 FDESEGDPMTIAVNPSGD-DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137 (301)
Q Consensus 59 ~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 137 (301)
+..+.....+++|+|+++ .++++..++.|..|+..++ . ..+. .+...+.+++++|+|+++++...++.|.
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-~~~~-------~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-SPEM-------HPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-EEEE-------SSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-EEEE-------CCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 334556688999999998 6777778899999998766 2 1111 1345689999999999877776678999
Q ss_pred EEeCCCcceecccccC----CccEEEEEecCCCcEEEEE----e-------------CCCcEEEEeCCCCceEEEEeecC
Q 022184 138 IMHWPSLRIILDEPKA----HKSVLDMDFSLDSEFLATT----S-------------TDGSARIWKTEDGVAWTFLTRNS 196 (301)
Q Consensus 138 v~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~----~-------------~d~~i~i~d~~~~~~~~~~~~~~ 196 (301)
+||..+++........ ...+..++++|+|+++++. + ..+.|..++.. ++. ..+...
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~- 170 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRD- 170 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECC-
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecC-
Confidence 9999777653222111 1246789999999988873 2 12456666654 443 333333
Q ss_pred CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEcc-CceE---eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEe
Q 022184 197 DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS-TWNK---IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVD 272 (301)
Q Consensus 197 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~ 272 (301)
...+..++|+|+++. +++...++.|.+||+. +++. ...+......+..++++++|+++++. ++.|.+|+
T Consensus 171 ~~~~~gi~~s~dg~~-----lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNL-----LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp CSSEEEEEECTTSCE-----EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred CCCCccEEECCCCCE-----EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence 335789999999997 4666778899999986 4443 22222234556789999999866666 78899999
Q ss_pred CCCceeeccccccccCccEEEEEE-ccCCC
Q 022184 273 VKKMEINHWSKRLHLGTSIALVEF-CPTQR 301 (301)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~v~~~~~-spdg~ 301 (301)
.. ++.+..+ ..+ .. +++++| +|||+
T Consensus 244 ~~-g~~~~~~-~~~-~~-~~~~~f~~~d~~ 269 (296)
T 3e5z_A 244 PD-GDELGRV-LTP-QT-TSNLCFGGPEGR 269 (296)
T ss_dssp TT-SCEEEEE-ECS-SC-CCEEEEESTTSC
T ss_pred CC-CCEEEEE-ECC-CC-ceeEEEECCCCC
Confidence 87 6655555 334 44 889999 57764
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=5.6e-19 Score=145.39 Aligned_cols=221 Identities=10% Similarity=-0.050 Sum_probs=144.5
Q ss_pred CCcceEEEECCCCCeEEEEecC---CcEEEEEEcCCccccccccccCCCCCCCCC-eeEEEEeeCCCEEEEeecCCeEEE
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTN---GGCKLFEVYGGATDINLLAKKMPPLQDAGP-QKCLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~v 138 (301)
...+..++|+|+|++|+..... ..|.+|++.+++... + ..+... ...+.|+|||+.|+.++.++.|++
T Consensus 35 ~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l-------~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (396)
T 3c5m_A 35 RNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-L-------TEGKGDNTFGGFISTDERAFFYVKNELNLMK 106 (396)
T ss_dssp CCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-C-------CCSSCBCTTTCEECTTSSEEEEEETTTEEEE
T ss_pred ceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-e-------ecCCCCccccceECCCCCEEEEEEcCCcEEE
Confidence 3447889999999998877543 367777877665311 1 111222 233789999999999999999999
Q ss_pred EeCCCcceecccccCCccEEE-------------------EEecCCCcEEEEE-----eCCCcEEEEeCCCCceEEEEee
Q 022184 139 MHWPSLRIILDEPKAHKSVLD-------------------MDFSLDSEFLATT-----STDGSARIWKTEDGVAWTFLTR 194 (301)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~ 194 (301)
||+.+++.......+...... +.|+|+++.++.. ..+..|.+||+.+++......
T Consensus 107 ~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~- 185 (396)
T 3c5m_A 107 VDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ- 185 (396)
T ss_dssp EETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-
T ss_pred EECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-
Confidence 999887654333322222222 3567787766654 356689999999887655543
Q ss_pred cCCCCeeEEEEcc-CCCcceEEEEEEeCCc----ceEEEEEccCceEeeeeecc-CCCcEEEEEcCCCCEEEEeeCC---
Q 022184 195 NSDEKIELCRFSK-DGTKPFLFCTVQRGDK----ALLAVYDISTWNKIGHKRLL-RKPASVLSISLDGKYLAMGSKD--- 265 (301)
Q Consensus 195 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d--- 265 (301)
+ ...+..+.|+| ++..+++ ...+.. ..|.+||+..++........ ...+..++|+|||++|+.++.+
T Consensus 186 ~-~~~~~~~~~sp~dg~~l~~---~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 186 D-TAWLGHPIYRPFDDSTVGF---CHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ 261 (396)
T ss_dssp E-SSCEEEEEEETTEEEEEEE---EECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred C-CcccccceECCCCCCEEEE---EecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCC
Confidence 2 34588999999 7775321 222222 57999998766533222211 2247788999999988877554
Q ss_pred --CcEEEEeCCCceeeccccccccCccEEEEEEcc-CCC
Q 022184 266 --GDICVVDVKKMEINHWSKRLHLGTSIALVEFCP-TQR 301 (301)
Q Consensus 266 --~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~ 301 (301)
+.|++||+.+++..... .. .. .. +.|+| ||+
T Consensus 262 ~~~~l~~~d~~~g~~~~l~-~~--~~-~~-~~~s~~dg~ 295 (396)
T 3c5m_A 262 TDRVIYKANPETLENEEVM-VM--PP-CS-HLMSNFDGS 295 (396)
T ss_dssp CCEEEEEECTTTCCEEEEE-EC--CS-EE-EEEECSSSS
T ss_pred ccceEEEEECCCCCeEEee-eC--CC-CC-CCccCCCCc
Confidence 44999999988755432 11 11 23 88999 885
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.78 E-value=2.2e-16 Score=123.15 Aligned_cols=202 Identities=9% Similarity=0.015 Sum_probs=143.4
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~ 142 (301)
...+.+++++++|+.+++.. ++.|.+|+..+..... . .......+..++++++|+++++...++.|.+|+..
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~-~------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 137 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV-L------PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAG 137 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE-C------CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred cCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee-e------ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECC
Confidence 45688999999998655554 8889999976543211 1 11123567899999999877777778899999865
Q ss_pred CcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCC
Q 022184 143 SLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD 222 (301)
Q Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 222 (301)
+.............+.+++++|+++++++...++.|.+||............. ...+..++++++|.. .++...
T Consensus 138 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~d~~g~l-----~v~~~~ 211 (270)
T 1rwi_B 138 SKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD-ITAPWGIAVDEAGTV-----YVTEHN 211 (270)
T ss_dssp CCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS-CCSEEEEEECTTCCE-----EEEETT
T ss_pred CceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccC-CCCceEEEECCCCCE-----EEEECC
Confidence 54433222223346788999999997777777889999998776544322222 245889999999963 355566
Q ss_pred cceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCcee
Q 022184 223 KALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278 (301)
Q Consensus 223 ~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~ 278 (301)
++.|.+||............+...+..++++|+|+++++...++.|++|++...+.
T Consensus 212 ~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 212 TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp TSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 78899999876543322222235689999999999888888899999999876554
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.78 E-value=1.6e-17 Score=146.53 Aligned_cols=226 Identities=11% Similarity=0.002 Sum_probs=149.0
Q ss_pred cccCCcceEEEECCCCCeEEEEe-----cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC
Q 022184 60 DESEGDPMTIAVNPSGDDFVCST-----TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG 134 (301)
Q Consensus 60 ~~h~~~v~~~~~~~~~~~l~~~~-----~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 134 (301)
.+|...+..++|||||++||.+. .+..|++||+.+++... ...+.. .....++|+|||+.|+.++.+.
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~------~~~~~~-~~~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK------VDVIEG-GKYATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS------SCCBSC-CTTCCCEECTTSSEEEEEECCC
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC------CcccCc-ccccceEEecCCCEEEEEEecC
Confidence 35666799999999999998443 34689999999876520 001111 1126789999999999998876
Q ss_pred e-------------EEEEeCCCcce----ecccccCCccEEEEEecCCCcEEEEEeCCC----cEEEEeCCCCceEEEEe
Q 022184 135 H-------------LRIMHWPSLRI----ILDEPKAHKSVLDMDFSLDSEFLATTSTDG----SARIWKTEDGVAWTFLT 193 (301)
Q Consensus 135 ~-------------i~v~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~ 193 (301)
. |++|++.+++. +.....+...+..+.|+|||++|+..+.++ .|.+++..+++. ..+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~ 268 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLV 268 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEee
Confidence 5 99999987762 222223345788999999999988877665 677777665554 3444
Q ss_pred ecCCCCeeEEEEccCCCcceEEEEEEe--CCcceEEEEEccCceE--eeeeecc--CCCcEEEEEcCCCCEEEEeeCCCc
Q 022184 194 RNSDEKIELCRFSKDGTKPFLFCTVQR--GDKALLAVYDISTWNK--IGHKRLL--RKPASVLSISLDGKYLAMGSKDGD 267 (301)
Q Consensus 194 ~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~d~~~~~~--~~~~~~~--~~~v~~~~~s~~~~~l~~~~~d~~ 267 (301)
.+.. .+....+ ++|. +++ .+. ..++.|.+||+.+++. ...+..+ ...+..++|+ ++.++++...|+.
T Consensus 269 ~~~~-~~~~~~~-~~g~-l~~---~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 269 KGVG-AKYEVHA-WKDR-FYV---LTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT 341 (695)
T ss_dssp ECSS-CCEEEEE-ETTE-EEE---EECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE
T ss_pred cCCC-ceEEEEe-cCCc-EEE---EECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 4433 3455555 6666 332 222 2468999999987642 1223322 3457788888 7778888888988
Q ss_pred EEEEeCC-CceeeccccccccCccEEEEEEccCCC
Q 022184 268 ICVVDVK-KMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 268 i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+||.+. +++....+.... ...+..++++|||+
T Consensus 342 ~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~ 375 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTVQLPG-VGAASNLMGLEDLD 375 (695)
T ss_dssp EEEEEEETTCCEEEECCCSS-SSEECCCBSCTTCS
T ss_pred EEEEEEeCCCCeeEEecCCC-CeEEEEeecCCCCC
Confidence 7777654 344333332222 45677788888763
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.78 E-value=1.1e-16 Score=141.69 Aligned_cols=250 Identities=11% Similarity=-0.004 Sum_probs=162.1
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 85 (301)
.+..++|+|| ++.+|.+...... ....|.+|+. .+...... .+. ...+..++|+|||+.|+.++.++
T Consensus 126 ~~~~~~~SPD---g~~la~~~~~~G~-~~~~i~v~d~--~tg~~~~~-----~~~--~~~~~~~~wspDg~~l~~~~~~~ 192 (710)
T 2xdw_A 126 ALRGYAFSED---GEYFAYGLSASGS-DWVTIKFMKV--DGAKELPD-----VLE--RVKFSCMAWTHDGKGMFYNAYPQ 192 (710)
T ss_dssp EEEEEEECTT---SSEEEEEEEETTC-SCEEEEEEET--TTTEEEEE-----EEE--EECSCCEEECTTSSEEEEEECCC
T ss_pred EEEEEEECCC---CCEEEEEEcCCCC-ceEEEEEEEC--CCCCCCcc-----ccc--CcccceEEEEeCCCEEEEEEECC
Confidence 5788999988 6677765432111 1124555544 44333211 111 12267899999999999988776
Q ss_pred c----------------EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec-----CCeEEEEeCCC-
Q 022184 86 G----------------CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-----DGHLRIMHWPS- 143 (301)
Q Consensus 86 ~----------------i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~v~d~~~- 143 (301)
. |++|++.++.....+.. ....+...+..+.|+|||++|+..+. +..|++||+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~---~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 269 (710)
T 2xdw_A 193 QDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA---EFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE 269 (710)
T ss_dssp CSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE---CCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred ccccccccccccCCCCEEEEEECCCCcccceEEe---ccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccc
Confidence 5 99999977653222211 11113345788999999999988765 56899999976
Q ss_pred -----cc-eecccccCCccEEEEEecCCCcEEEEEeCC----CcEEEEeCCCCc--eEEEEeecCC-CCeeEEEEccCCC
Q 022184 144 -----LR-IILDEPKAHKSVLDMDFSLDSEFLATTSTD----GSARIWKTEDGV--AWTFLTRNSD-EKIELCRFSKDGT 210 (301)
Q Consensus 144 -----~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~--~~~~~~~~~~-~~v~~~~~~~~~~ 210 (301)
+. ....+..+...+.. .|+|+|+.|+..+.. ..|.+||+.++. ....+..+.. ..+..++|++++.
T Consensus 270 ~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 270 SNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp SSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE
T ss_pred ccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE
Confidence 43 23445455555444 488899887776643 359999998764 2344443433 3578889986554
Q ss_pred cceEEEEEEeCCcc--eEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEee----CCCcEEEEeCCCce
Q 022184 211 KPFLFCTVQRGDKA--LLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS----KDGDICVVDVKKME 277 (301)
Q Consensus 211 ~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~d~~i~i~~~~~~~ 277 (301)
. +++...++ .|.+||+.+++.+..+..+...+..+.++|+++.++... ..+.|++||+.+++
T Consensus 349 l-----v~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 349 L-----VLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp E-----EEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred E-----EEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 3 34444454 577788867776666666667788899999987666442 34789999998776
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=1.4e-14 Score=114.37 Aligned_cols=262 Identities=6% Similarity=-0.020 Sum_probs=171.0
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
..+.++++.++ +++.+... ..+ .++.+++. ..+.. ..+..+...+.+++++++|..+++...+
T Consensus 15 ~~~~~i~~d~~---g~l~v~~~------~~~--~v~~~d~~-~~~~~-----~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 77 (299)
T 2z2n_A 15 TGPYGITVSDK---GKVWITQH------KAN--MISCINLD-GKITE-----YPLPTPDAKVMCLTISSDGEVWFTENAA 77 (299)
T ss_dssp CCEEEEEECTT---SCEEEEET------TTT--EEEEECTT-CCEEE-----EECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CCccceEECCC---CCEEEEec------CCC--cEEEEcCC-CCeEE-----ecCCcccCceeeEEECCCCCEEEeCCCC
Confidence 45778888765 44444422 122 34445554 22211 1122345679999999999877776667
Q ss_pred CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecc-cccCCccEEEEEec
Q 022184 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMDFS 163 (301)
Q Consensus 85 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~ 163 (301)
+.|..|+.+ ++. .... .. .....+..++++++++++++...++.|..||. +++.... .......+..+++.
T Consensus 78 ~~i~~~~~~-g~~-~~~~---~~--~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 78 NKIGRITKK-GII-KEYT---LP--NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLG 149 (299)
T ss_dssp TEEEEECTT-SCE-EEEE---CS--STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred CeEEEECCC-CcE-EEEe---CC--CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEc
Confidence 889999875 221 1111 11 12356889999999988777777889999998 5443321 22233568999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeee-eec
Q 022184 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH-KRL 242 (301)
Q Consensus 164 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~ 242 (301)
++++.+++...++.|..||. +++............+..+++++++.. .++...++.|.+||. +++.... ...
T Consensus 150 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l-----~v~~~~~~~i~~~~~-~g~~~~~~~~~ 222 (299)
T 2z2n_A 150 SDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDAL-----WFVEIIGNKIGRITT-SGEITEFKIPT 222 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE-----EEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred CCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCE-----EEEccCCceEEEECC-CCcEEEEECCC
Confidence 99988877777789999998 665543222222345889999999874 344555788999999 5554321 222
Q ss_pred cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
....+..++++++|+++++...++.|..||. +++........+ ...+.++++ ++|+
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~-~~~~~~i~~-~~g~ 278 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIK-SAEPHGICF-DGET 278 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSS-SCCEEEEEE-CSSC
T ss_pred CCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCC-CCccceEEe-cCCC
Confidence 3467889999999986666657789999998 454333212233 467889998 8774
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=4.6e-16 Score=121.29 Aligned_cols=221 Identities=8% Similarity=0.017 Sum_probs=150.9
Q ss_pred cceEEEECCCCCeEE-EEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCC
Q 022184 65 DPMTIAVNPSGDDFV-CSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~-~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 143 (301)
.+.+++++++|+.++ +...++.|.+|+..+..... . ...+...+.+++++++++++++.. ++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~------~-~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV------L-PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE------C-CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce------E-eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCC
Confidence 688999999998666 43667889999875543211 0 112234578899999998666555 88999999876
Q ss_pred cceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCc
Q 022184 144 LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (301)
Q Consensus 144 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 223 (301)
.............+..++++|+|+++++...++.|.+|+..+......... ....+..++++++|+. .++...+
T Consensus 97 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l-----~v~~~~~ 170 (270)
T 1rwi_B 97 NNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT-GLNDPDGVAVDNSGNV-----YVTDTDN 170 (270)
T ss_dssp SCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC-SCCSCCCEEECTTCCE-----EEEEGGG
T ss_pred ceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc-cCCCceeEEEeCCCCE-----EEEECCC
Confidence 543222112235789999999999888777788999998765543322211 2234788999999974 3455567
Q ss_pred ceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 224 ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 224 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+.|.+||................+..++++++|.++++...++.|.+|+.......... ..+ ...+.+++++|||+
T Consensus 171 ~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~-~~~-~~~p~~i~~~~~g~ 246 (270)
T 1rwi_B 171 NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP-FTG-LNTPLAVAVDSDRT 246 (270)
T ss_dssp TEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC-CCS-CSCEEEEEECTTCC
T ss_pred CEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec-cCC-CCCceeEEECCCCC
Confidence 89999998876554332333356889999999977777777889999999765443322 222 35689999999985
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=1.9e-15 Score=121.22 Aligned_cols=217 Identities=11% Similarity=-0.025 Sum_probs=152.1
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCC
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 143 (301)
..+..+.+. +++.+++...++.|.+||..+++....+ ........++++++++.+++...++.|.+||..+
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i--------~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI--------TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE--------ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc--------CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 446778774 3445555566789999999887763333 1235678999999985444443789999999998
Q ss_pred cceecccccCC-----ccEEEEEecCCCcEEEEEe-CCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEE
Q 022184 144 LRIILDEPKAH-----KSVLDMDFSLDSEFLATTS-TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCT 217 (301)
Q Consensus 144 ~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 217 (301)
++....+.... .....+++ .+++.+++.. .++.|.++|+++++....+... .....++++|+|+. .
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g--~~p~~i~~~~dG~l-----~ 186 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG--IQPTSLVMDKYNKM-----W 186 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS--SCBCCCEECTTSEE-----E
T ss_pred CeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC--CCccceEEcCCCCE-----E
Confidence 88765544332 14556777 3444444443 4889999999999888877643 23678999999984 2
Q ss_pred EEeCCc----------ceEEEEEccCceEeeeeecc-CCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc-ccc
Q 022184 218 VQRGDK----------ALLAVYDISTWNKIGHKRLL-RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS-KRL 285 (301)
Q Consensus 218 ~~~~~~----------~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~ 285 (301)
++...+ +.|.++|..+++....+... ......++++|+++.|+++.. .|.+||..+++..... ...
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~ 264 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEF 264 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCC
T ss_pred EEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecC
Confidence 333333 78999999998877665433 346899999999999988765 8999999988764321 111
Q ss_pred ccCccEEEEEEccCC
Q 022184 286 HLGTSIALVEFCPTQ 300 (301)
Q Consensus 286 ~~~~~v~~~~~spdg 300 (301)
. ......++++|++
T Consensus 265 ~-~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 265 R-DTKYYGLTVNPNN 278 (328)
T ss_dssp C-SSCEEEEEECTTT
T ss_pred C-CCceEEEEEcCCC
Confidence 1 3568899999953
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.74 E-value=8.5e-15 Score=117.72 Aligned_cols=240 Identities=17% Similarity=0.150 Sum_probs=151.8
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC-
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN- 84 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d- 84 (301)
.+.+++|.++ +++++++.. ++ .|+.+++.+..+.. ....+...+.+++++|+|+++++...+
T Consensus 46 ~~~~~~~~~~---g~l~~~~~~------~~--~i~~~d~~~~~~~~------~~~~~~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 46 QLEGLNFDRQ---GQLFLLDVF------EG--NIFKINPETKEIKR------PFVSHKANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp CEEEEEECTT---SCEEEEETT------TC--EEEEECTTTCCEEE------EEECSSSSEEEEEECTTSCEEEEECTTS
T ss_pred cccCcEECCC---CCEEEEECC------CC--EEEEEeCCCCcEEE------EeeCCCCCcceEEECCCCcEEEEeCCCC
Confidence 4578889865 456555442 23 45556655443311 112346779999999999877776665
Q ss_pred ---CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec------CCeEEEEeCCCcceecccccCCc
Q 022184 85 ---GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV------DGHLRIMHWPSLRIILDEPKAHK 155 (301)
Q Consensus 85 ---~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~ 155 (301)
+.|.+||.+++....... .......+..++++|+|+++++... .+.|..+|..+++.. .+.....
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~-----~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~ 182 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIE-----DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT-PIIQNIS 182 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEEC-----SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE-EEEEEES
T ss_pred CCCceEEEEeCCCCEEEEEEc-----cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE-EeecCCC
Confidence 579999987665421111 0113357899999999987776553 356777776554432 2222334
Q ss_pred cEEEEEecCCCcEEE-EEeCCCcEEEEeCCC-CceEEEE-----ee-cCCCCeeEEEEccCCCcceEEEEEEeCCcceEE
Q 022184 156 SVLDMDFSLDSEFLA-TTSTDGSARIWKTED-GVAWTFL-----TR-NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~-~~~~~~~-----~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (301)
.+..++|+|+++.|+ +.+.++.|.+||+++ +.....+ .. .....+..++++++|+. .++...++.|.
T Consensus 183 ~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l-----~v~~~~~~~v~ 257 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL-----YVAMYGQGRVL 257 (333)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE-----EEEEETTTEEE
T ss_pred cccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCE-----EEEEcCCCEEE
Confidence 578899999998554 445678999999964 3322211 11 11135788999999984 34444568899
Q ss_pred EEEccCceEeeeeeccCC------CcEEEEEcCCCCEEEEeeCCC------cEEEEeCC
Q 022184 228 VYDISTWNKIGHKRLLRK------PASVLSISLDGKYLAMGSKDG------DICVVDVK 274 (301)
Q Consensus 228 ~~d~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~~~d~------~i~i~~~~ 274 (301)
+||.. ++.+..+..... .+.+++|+||++.|++++.++ .|..+++.
T Consensus 258 ~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 258 VFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred EECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 99984 555555544332 578999999987777666553 45555554
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.74 E-value=3.5e-16 Score=138.07 Aligned_cols=251 Identities=12% Similarity=0.000 Sum_probs=156.0
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
..+..++|+|| ++.+|.+..... +.+..|++|+.+... ... ...+.. .....++|+|||+.|+.++.|
T Consensus 121 ~~~~~~~~SPD---G~~la~~~~~~G-~~~~~i~v~dl~tg~--~~~----~~~~~~--~~~~~~~wspDg~~l~~~~~d 188 (695)
T 2bkl_A 121 VSLGTWAVSWD---GKKVAFAQKPNA-ADEAVLHVIDVDSGE--WSK----VDVIEG--GKYATPKWTPDSKGFYYEWLP 188 (695)
T ss_dssp EEEEEEEECTT---SSEEEEEEEETT-CSCCEEEEEETTTCC--BCS----SCCBSC--CTTCCCEECTTSSEEEEEECC
T ss_pred EEEEEEEECCC---CCEEEEEECCCC-CceEEEEEEECCCCC--CcC----CcccCc--ccccceEEecCCCEEEEEEec
Confidence 36888999988 667775433211 134556666665432 210 001111 112689999999999999887
Q ss_pred Cc-------------EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC----eEEEEeCCCccee
Q 022184 85 GG-------------CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG----HLRIMHWPSLRII 147 (301)
Q Consensus 85 ~~-------------i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----~i~v~d~~~~~~~ 147 (301)
.. |++|++.++.....+.. ....+...+..+.|||||++|++.+.++ .|++++..+++.
T Consensus 189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~---~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~- 264 (695)
T 2bkl_A 189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH---ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF- 264 (695)
T ss_dssp CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE---CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-
T ss_pred CCCCCccccCCCCCEEEEEECCCCchhceEEE---ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-
Confidence 66 99999987654222211 1112335678999999999998887666 777777655543
Q ss_pred cccccCCccEEEEEecCCCcEEEEEe---CCCcEEEEeCCCCce--EEEEeecC-CCCeeEEEEccCCCcceEEEEEEeC
Q 022184 148 LDEPKAHKSVLDMDFSLDSEFLATTS---TDGSARIWKTEDGVA--WTFLTRNS-DEKIELCRFSKDGTKPFLFCTVQRG 221 (301)
Q Consensus 148 ~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~--~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (301)
..+..+...+....+ +++++++... .++.|.+||+.+++. ...+..+. ...+..++|+ ++.. +++..
T Consensus 265 ~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~l-----v~~~~ 337 (695)
T 2bkl_A 265 RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHL-----SLEYL 337 (695)
T ss_dssp EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEE-----EEEEE
T ss_pred EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEE-----EEEEE
Confidence 344445555566666 5666444433 257899999987653 23333333 4457888887 4432 45556
Q ss_pred CcceEEEEEcc-CceEeeeeecc-CCCcEEEEEcCCCCEEEEee----CCCcEEEEeCCCcee
Q 022184 222 DKALLAVYDIS-TWNKIGHKRLL-RKPASVLSISLDGKYLAMGS----KDGDICVVDVKKMEI 278 (301)
Q Consensus 222 ~~~~i~~~d~~-~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~----~d~~i~i~~~~~~~~ 278 (301)
.++..++|.+. +++....+..+ ...+..++++|+++.++... ..+.|++||+.+++.
T Consensus 338 ~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 338 KDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred ECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 67766666544 34444444443 45677788999998777443 347899999988764
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=6.7e-15 Score=125.69 Aligned_cols=223 Identities=11% Similarity=0.066 Sum_probs=152.1
Q ss_pred cceEEEECCCCCeEEEEecCCcEEEEEEc--CCccccccccccCCCCCCCCCeeEEEEe----eCCCEEEEeec-CCeEE
Q 022184 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVY--GGATDINLLAKKMPPLQDAGPQKCLSFS----VDGSRFAAGGV-DGHLR 137 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~w~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~-dg~i~ 137 (301)
.+..+.|+|||+++++++.|+.|.+||+. +.+....+ ........++|+ |||+++++++. ++.+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i--------~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI--------KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE--------ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE--------ecCCCCceeEEccccCCCCCEEEEEEccCCeEE
Confidence 56789999999999999999999999985 44332111 122346789999 69999887765 59999
Q ss_pred EEeCCCcceecccccC-----------CccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEE
Q 022184 138 IMHWPSLRIILDEPKA-----------HKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRF 205 (301)
Q Consensus 138 v~d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 205 (301)
++|..+.+.+..+... ...+..+..++++. +++....+|.|.++|....+.+.............+.|
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~ 349 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGL 349 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceE
Confidence 9999888876654321 12577888888766 45555567999999998765444333333445788999
Q ss_pred ccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec-cC--CCcEEEE-EcCCCCEE-EEee-CCCcEEEEeCCC----
Q 022184 206 SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL-LR--KPASVLS-ISLDGKYL-AMGS-KDGDICVVDVKK---- 275 (301)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~--~~v~~~~-~s~~~~~l-~~~~-~d~~i~i~~~~~---- 275 (301)
+|+++++ +++...++.|.++|+.+++.+..+.. .. .+-..+. ++|++..+ ++.. .++.|.++|..+
T Consensus 350 ~pdgr~~----~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~ 425 (567)
T 1qks_A 350 DGSHRYF----ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHP 425 (567)
T ss_dssp CTTSCEE----EEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred CCCCCEE----EEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCc
Confidence 9999973 34555678999999999987766554 22 1112233 58875444 4443 468999999987
Q ss_pred ---ceeeccccccccCccEEEEEEccCCC
Q 022184 276 ---MEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 276 ---~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+.++.+.. . ...-.-+..+|||+
T Consensus 426 ~~~~kvv~~i~~-~-g~g~~~i~~~p~~~ 452 (567)
T 1qks_A 426 DNAWKILDSFPA-L-GGGSLFIKTHPNSQ 452 (567)
T ss_dssp TTBTSEEEEEEC-S-CSCCCCEECCTTCS
T ss_pred cccCEEEEEEec-C-CCCCEEEEeCCCCC
Confidence 555555432 1 12223356777764
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=2.4e-15 Score=120.68 Aligned_cols=218 Identities=5% Similarity=-0.102 Sum_probs=147.8
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee--cCCeEEEEe
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG--VDGHLRIMH 140 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~v~d 140 (301)
...+..++++++++.+++...++.|.+||..+.+....+.... ..........+++ . +..++++. .++.|.++|
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~--~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPD--MDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTT--CCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEE
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCC--ccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEE
Confidence 4568899999988544444378999999998876533322111 0001113456677 4 44555554 488999999
Q ss_pred CCCcceecccccCCccEEEEEecCCCcEEEEEeCC----------CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCC
Q 022184 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD----------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGT 210 (301)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 210 (301)
+.+++.+..+... .....++++|+|++++++..+ +.|.++|..+++....+.......+..++|+|+++
T Consensus 159 ~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~ 237 (328)
T 3dsm_A 159 TETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD 237 (328)
T ss_dssp TTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC
T ss_pred CCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC
Confidence 9998876665433 345688999999977776654 78999999999887777654334689999999999
Q ss_pred cceEEEEEEeCCcceEEEEEccCceEeee--eeccCCCcEEEEEcCC-CCEEEEe----eCCCcEEEEeCCCceeecccc
Q 022184 211 KPFLFCTVQRGDKALLAVYDISTWNKIGH--KRLLRKPASVLSISLD-GKYLAMG----SKDGDICVVDVKKMEINHWSK 283 (301)
Q Consensus 211 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~s~~-~~~l~~~----~~d~~i~i~~~~~~~~~~~~~ 283 (301)
.+ ..... .|.+||..+++.... +.........++++|+ ++++++. ..++.|.+||.. ++.+..+.
T Consensus 238 ~l-----yv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 238 TL-----YWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp EE-----EEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EE-----EEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 73 33332 899999988765321 1111356889999995 5555555 467899999998 88777664
Q ss_pred ccccCccEEEEEE
Q 022184 284 RLHLGTSIALVEF 296 (301)
Q Consensus 284 ~~~~~~~v~~~~~ 296 (301)
.+ .....++|
T Consensus 310 ~G---~~P~~~~~ 319 (328)
T 3dsm_A 310 VG---IIPGAFCW 319 (328)
T ss_dssp EE---ESEEEEEE
T ss_pred ec---cCcceEEE
Confidence 32 34455555
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.73 E-value=1.4e-14 Score=114.45 Aligned_cols=226 Identities=9% Similarity=0.062 Sum_probs=157.2
Q ss_pred ccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEE
Q 022184 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 59 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 138 (301)
+..+...+.+++++++|+.+++...++.|.+||.. +... ... . ......+.+++++++++++++...++.|..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~---~--~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYP---L--PTPDAKVMCLTISSDGEVWFTENAANKIGR 82 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEE---C--SSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-Eec---C--CcccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence 34455679999999999877766567889999977 4321 111 0 012357889999999988777776889999
Q ss_pred EeCCCcce-ecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEE
Q 022184 139 MHWPSLRI-ILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCT 217 (301)
Q Consensus 139 ~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 217 (301)
||.. ++. ..........+..+++.|+++++++...++.|..||. +++............+..+++.+++.. .
T Consensus 83 ~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l-----~ 155 (299)
T 2z2n_A 83 ITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNAL-----W 155 (299)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCE-----E
T ss_pred ECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCE-----E
Confidence 9976 332 1122223457899999999988887777889999998 555443322223345889999999974 3
Q ss_pred EEeCCcceEEEEEccCceEeee-eeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEE
Q 022184 218 VQRGDKALLAVYDISTWNKIGH-KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF 296 (301)
Q Consensus 218 ~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 296 (301)
++...++.|..||. +++.... .......+..++++++|+++++...++.|.+|+. +++........+ ...+.++++
T Consensus 156 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~ 232 (299)
T 2z2n_A 156 FTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTP-NARPHAITA 232 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEE
T ss_pred EEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCC-CCCceeEEE
Confidence 44556788999998 5554332 2223456789999999997777666789999999 665443222223 467889999
Q ss_pred ccCCC
Q 022184 297 CPTQR 301 (301)
Q Consensus 297 spdg~ 301 (301)
+++|+
T Consensus 233 ~~~g~ 237 (299)
T 2z2n_A 233 GAGID 237 (299)
T ss_dssp CSTTC
T ss_pred CCCCC
Confidence 99875
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.73 E-value=2.7e-15 Score=117.14 Aligned_cols=211 Identities=7% Similarity=-0.069 Sum_probs=158.3
Q ss_pred CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccC
Q 022184 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (301)
Q Consensus 74 ~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 153 (301)
.++.|++++.++.|++||.++++...++... ....+.++.++|+|++++ +.++.|+.||. +++.+.++...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~------~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE------KGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECC------TTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCC------ccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence 3578889999999999999888775544321 113578899999999888 34788999998 78887777654
Q ss_pred C-ccEEEEEecCCCcEEEEEeC-CCcEEEEeCCCCceEEEEeecCC-----CCeeEEEEccCCCcceEEEEEEeCCcceE
Q 022184 154 H-KSVLDMDFSLDSEFLATTST-DGSARIWKTEDGVAWTFLTRNSD-----EKIELCRFSKDGTKPFLFCTVQRGDKALL 226 (301)
Q Consensus 154 ~-~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (301)
. ..+.++.+.|+|+++++.+. ++.+..+|. +++.+..+..... .....+++.++|+. +++...++.|
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~-----lv~~~~~~~v 148 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY-----LVPLFATSEV 148 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE-----EEEETTTTEE
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE-----EEEecCCCEE
Confidence 3 47889999999999999887 778888885 7777776653211 13556788999997 6777889999
Q ss_pred EEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccc----cCccEEEEEEccCCC
Q 022184 227 AVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLH----LGTSIALVEFCPTQR 301 (301)
Q Consensus 227 ~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~spdg~ 301 (301)
..||.+ ++.+..+... ..+..+...++|+.++++..+++|..+|..+++.+..+.... ....+..++..++|+
T Consensus 149 ~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 149 REIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp EEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred EEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC
Confidence 999998 8887766654 345677889999999999888899999999898876653211 012366666666653
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.72 E-value=1.1e-13 Score=109.25 Aligned_cols=263 Identities=9% Similarity=0.002 Sum_probs=168.4
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
..+.++++.++ +++.+... ..+ .|..+++. ..+.. ..+..+...+.+++++++++..++...+
T Consensus 20 ~~p~~i~~d~~---g~l~v~~~------~~~--~v~~~~~~-~~~~~-----~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 82 (300)
T 2qc5_A 20 SGPYGITSSED---GKVWFTQH------KAN--KISSLDQS-GRIKE-----FEVPTPDAKVMCLIVSSLGDIWFTENGA 82 (300)
T ss_dssp CCEEEEEECTT---SCEEEEET------TTT--EEEEECTT-SCEEE-----EECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CCcceeeECCC---CCEEEEcC------CCC--eEEEECCC-CceEE-----EECCCCCCcceeEEECCCCCEEEEecCC
Confidence 45667777755 44444422 123 34445554 22211 1122334678999999999877776667
Q ss_pred CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceec-ccccCCccEEEEEec
Q 022184 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL-DEPKAHKSVLDMDFS 163 (301)
Q Consensus 85 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~ 163 (301)
+.|..+|.. ++.. ... .. .....+..+++.++++++++...++.|..+|.. ++... ........+..+++.
T Consensus 83 ~~v~~~d~~-g~~~-~~~---~~--~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 83 NKIGKLSKK-GGFT-EYP---LP--QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG 154 (300)
T ss_dssp TEEEEECTT-SCEE-EEE---CS--STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC
T ss_pred CeEEEECCC-CCeE-Eec---CC--CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEEC
Confidence 889999876 3321 111 11 122568899999999887777668899999987 54432 222234578999999
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeee-eec
Q 022184 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH-KRL 242 (301)
Q Consensus 164 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~ 242 (301)
++++++++...++.|..+|. +++............+..+++.+++.. .++....+.|.+||. +++.... ...
T Consensus 155 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l-----~v~~~~~~~i~~~~~-~g~~~~~~~~~ 227 (300)
T 2qc5_A 155 SDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGAL-----WFVEIMGNKIGRITT-TGEISEYDIPT 227 (300)
T ss_dssp TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE-----EEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred CCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCE-----EEEccCCCEEEEEcC-CCcEEEEECCC
Confidence 99997777666788999998 555443222122345889999999874 344455678999998 4443322 222
Q ss_pred cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
....+.+++++++|++.++...++.|..|+. +++......... ...+.++++.++|+
T Consensus 228 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~ 284 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTE-NAEPHGITFGKDGS 284 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCST-TCCCCCEEECTTSC
T ss_pred CCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCcc-CCccceeEeCCCCC
Confidence 3456889999999986666666789999998 444332211222 35678888888874
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.72 E-value=7e-16 Score=137.07 Aligned_cols=226 Identities=12% Similarity=0.039 Sum_probs=144.9
Q ss_pred ccCCcceEEEECCCCCeEEEEecC-----CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCe
Q 022184 61 ESEGDPMTIAVNPSGDDFVCSTTN-----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (301)
Q Consensus 61 ~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (301)
+|...+..++|||||++|+.++.+ ..|++||+.+++...... +...+..++|+|| +.|+.+..++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--------~~~~~~~~~wspD-~~l~~~~~~~~ 230 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL--------KWVKFSGLAWLGN-DALLYSRFAEP 230 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE--------EEEESCCCEESTT-SEEEEEECCCC
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC--------CCceeccEEEECC-CEEEEEEecCc
Confidence 344578899999999999877654 359999998876522110 1112356899999 99988876543
Q ss_pred --------------EEEEeCCCcce----ecccccCCccEEEEEecCCCcEEEEEeCCC-----cEEEEeCCCC--ceEE
Q 022184 136 --------------LRIMHWPSLRI----ILDEPKAHKSVLDMDFSLDSEFLATTSTDG-----SARIWKTEDG--VAWT 190 (301)
Q Consensus 136 --------------i~v~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~--~~~~ 190 (301)
|++|++.++.. +.....+...+..+.|+|||++|+..+.++ .|++||+.++ +...
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 310 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT 310 (741)
T ss_dssp --------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE
T ss_pred ccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE
Confidence 88999876652 222222223588999999999888877544 7999999877 3134
Q ss_pred EEeecCCCCeeEEEEccCCCcceEEEEEE-eCCcceEEEEEccCc--eEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCc
Q 022184 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQ-RGDKALLAVYDISTW--NKIGHKRLLRKPASVLSISLDGKYLAMGSKDGD 267 (301)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 267 (301)
.+..+... .... ++|+|+.+++ ... ...++.|.+||+.++ +....+..+...+..++|+ ++.++++...|+.
T Consensus 311 ~l~~~~~~-~~~~-~~~dg~~l~~--~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 385 (741)
T 1yr2_A 311 ALIPDLKA-QWDF-VDGVGDQLWF--VSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK 385 (741)
T ss_dssp EEECSSSS-CEEE-EEEETTEEEE--EECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE
T ss_pred EecCCCCc-eEEE-EeccCCEEEE--EECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 45444333 3333 3588887332 111 123567999999874 3333333344456677887 5677888888887
Q ss_pred EEEEeCC-CceeeccccccccCccEEEEEEccCCC
Q 022184 268 ICVVDVK-KMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 268 i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.+||.+. +++....+...+ ...+..++++|||+
T Consensus 386 ~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~ 419 (741)
T 1yr2_A 386 SQVLAFDLDGKPAGAVSLPG-IGSASGLSGRPGDR 419 (741)
T ss_dssp EEEEEEETTSCEEEECBCSS-SCEEEEEECCBTCS
T ss_pred EEEEEEeCCCCceeeccCCC-CeEEEEeecCCCCC
Confidence 6666543 344444332223 56789999999874
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=5.6e-16 Score=125.32 Aligned_cols=229 Identities=10% Similarity=-0.029 Sum_probs=143.4
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC-
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN- 84 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d- 84 (301)
.+.+.+|+|| ++.++...... .++..+||.++..+..... +..+.. +..++|+|+|+.|+.++.+
T Consensus 60 ~~~~~~~SpD---g~~la~~~~~~---~~~~~~l~~~~~~~g~~~~-------l~~~~~-~~~~~wspdg~~l~~~~~~~ 125 (347)
T 2gop_A 60 NATMPRISPD---GKKIAFMRANE---EKKVSEIWVADLETLSSKK-------ILEAKN-IRSLEWNEDSRKLLIVGFKR 125 (347)
T ss_dssp SCEEEEECTT---SSEEEEEEEET---TTTEEEEEEEETTTTEEEE-------EEEESE-EEEEEECTTSSEEEEEEECC
T ss_pred cCCCeEECCC---CCEEEEEEecc---CCCcceEEEEECCCCceEE-------EEcCCC-ccceeECCCCCEEEEEEccC
Confidence 3567899988 55666543211 1134467777765543211 222233 8999999999999887642
Q ss_pred --------------------------CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC----
Q 022184 85 --------------------------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG---- 134 (301)
Q Consensus 85 --------------------------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---- 134 (301)
..|++|++.+++....+.. . .+..+.|+||| +++++..+.
T Consensus 126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--------~-~~~~~~~spdg-~~~~~~~~~~~~~ 195 (347)
T 2gop_A 126 REDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--------P-RFSSGIWHRDK-IVVNVPHREIIPQ 195 (347)
T ss_dssp CC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--------E-TTCEEEEETTE-EEEEEECCCSSCC
T ss_pred CCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--------C-CcccccCCCCe-EEEEEeccccccc
Confidence 4688888876653111111 1 56789999999 777775442
Q ss_pred ---eEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCC--------CcEEEEeCCCCceEEEEeecCCCCeeE-
Q 022184 135 ---HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD--------GSARIWKTEDGVAWTFLTRNSDEKIEL- 202 (301)
Q Consensus 135 ---~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~v~~- 202 (301)
...+|.+++++. ..+..+ ..+..+ +|||++|+..+.+ ..|.+|| +++. ..+...+...+..
T Consensus 196 ~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~ 268 (347)
T 2gop_A 196 YFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQA 268 (347)
T ss_dssp SSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEE
T ss_pred ccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCc
Confidence 344444444443 333333 445444 9999998887754 3677787 4543 3333333455775
Q ss_pred EEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcE-EEEeCCCce
Q 022184 203 CRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDI-CVVDVKKME 277 (301)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i-~i~~~~~~~ 277 (301)
+.|+ ++ . ++++..++.+++| +.+++.. .+..+...+.+++|+| .++++++.++.. .+|.+. ++
T Consensus 269 ~~~s-dg-~-----~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 269 KIKD-GK-V-----YFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE 332 (347)
T ss_dssp EEET-TE-E-----EEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS
T ss_pred cEEc-Cc-E-----EEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc
Confidence 8999 77 4 4666778889999 8755543 3344467789999999 677777766654 666665 54
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=1.5e-14 Score=112.86 Aligned_cols=232 Identities=12% Similarity=0.106 Sum_probs=159.8
Q ss_pred ccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccC-CcceEEEECCCCCeEEEEecCCcEEEEEEcCCcc
Q 022184 19 VNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESE-GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGAT 97 (301)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~ 97 (301)
.++++.+. .++.+.+| +..+.+.. ..+..+. ..+.++.++|+|+.++ +.++.|+.||. +++.
T Consensus 5 ~~~lv~~~------~~~~v~~~--d~~tG~~~------w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~ 67 (276)
T 3no2_A 5 QHLLVGGS------GWNKIAII--NKDTKEIV------WEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRE 67 (276)
T ss_dssp CEEEEECT------TCSEEEEE--ETTTTEEE------EEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCE
T ss_pred CcEEEeeC------CCCEEEEE--ECCCCeEE------EEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCE
Confidence 35666655 34445555 44333331 1233333 4688999999999888 35677999998 5554
Q ss_pred ccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec-CCeEEEEeCCCcceecccc------cCCccEEEEEecCCCcEEE
Q 022184 98 DINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-DGHLRIMHWPSLRIILDEP------KAHKSVLDMDFSLDSEFLA 170 (301)
Q Consensus 98 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~ 170 (301)
..++.. .....+.++.+.|+|+++++.+. ++.+..+|. +++.+.++. .++.....+++.++|++++
T Consensus 68 ~W~~~~------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv 140 (276)
T 3no2_A 68 LWNIAA------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLV 140 (276)
T ss_dssp EEEEEC------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEE
T ss_pred EEEEcC------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEE
Confidence 333321 11245788899999999998887 778888885 566554432 1223455677899999999
Q ss_pred EEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC------
Q 022184 171 TTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR------ 244 (301)
Q Consensus 171 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------ 244 (301)
+...++.|..||.+ ++.+..+... ..+..+...++|+. ++++..++.|..+|..+++.+-.+....
T Consensus 141 ~~~~~~~v~~~d~~-G~~~w~~~~~--~~~~~~~~~~~g~~-----~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l 212 (276)
T 3no2_A 141 PLFATSEVREIAPN-GQLLNSVKLS--GTPFSSAFLDNGDC-----LVACGDAHCFVQLNLESNRIVRRVNANDIEGVQL 212 (276)
T ss_dssp EETTTTEEEEECTT-SCEEEEEECS--SCCCEEEECTTSCE-----EEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCC
T ss_pred EecCCCEEEEECCC-CCEEEEEECC--CCccceeEcCCCCE-----EEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccc
Confidence 99999999999998 9988888754 24667888999986 5666777789999999998876665332
Q ss_pred CCcEEEEEcCCCCEEEEeeCC--------CcEEEEeC-CCceeeccc
Q 022184 245 KPASVLSISLDGKYLAMGSKD--------GDICVVDV-KKMEINHWS 282 (301)
Q Consensus 245 ~~v~~~~~s~~~~~l~~~~~d--------~~i~i~~~-~~~~~~~~~ 282 (301)
..+..++..++|+.+++.... +..+++++ .+++.+-.+
T Consensus 213 ~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~ 259 (276)
T 3no2_A 213 FFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQL 259 (276)
T ss_dssp SEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEE
T ss_pred cccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEe
Confidence 226788889999988887421 23456666 466666554
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.71 E-value=1.3e-14 Score=114.82 Aligned_cols=222 Identities=9% Similarity=0.014 Sum_probs=147.6
Q ss_pred cCCcceEEEECCCCCeE-EEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEe
Q 022184 62 SEGDPMTIAVNPSGDDF-VCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMH 140 (301)
Q Consensus 62 h~~~v~~~~~~~~~~~l-~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d 140 (301)
+..-..+..|+|++..| ++...++.|+.||..++.... ......+.+++++++|++++ +. ++.|.+||
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~---------~~~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d 79 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR---------VTMDAPVSSVALRQSGGYVA-TI-GTKFCALN 79 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE---------EECSSCEEEEEEBTTSSEEE-EE-TTEEEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE---------EeCCCceEEEEECCCCCEEE-EE-CCeEEEEE
Confidence 34456689999965544 455567899999987664311 11235789999999999544 44 56799999
Q ss_pred CCCcceeccccc----CCccEEEEEecCCCcEEEEEeCC---------CcEEEEeCCCCceEEEEeecCCCCeeEEEEcc
Q 022184 141 WPSLRIILDEPK----AHKSVLDMDFSLDSEFLATTSTD---------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSK 207 (301)
Q Consensus 141 ~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 207 (301)
.++++....... ....+.+++++|+|+++++...+ ..-.+|.+........+.... .....++|+|
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~-~~pngi~~sp 158 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV-DISNGLDWSL 158 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE-SBEEEEEECT
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc-ccccceEEcC
Confidence 887664322111 12358899999999976654322 234555554322222222222 2468999999
Q ss_pred CCCcceEEEEEEeCCcceEEEEEc--cCceE-----eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeec
Q 022184 208 DGTKPFLFCTVQRGDKALLAVYDI--STWNK-----IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH 280 (301)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~~~d~--~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~ 280 (301)
+++.+ .++...++.|.+||+ .++.. ...+......+..++++++|++.++....+.|..||..+++.+.
T Consensus 159 dg~~l----yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 159 DHKIF----YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp TSCEE----EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred CCCEE----EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 99863 245566789999987 44432 11222233567889999999888777777889999999888877
Q ss_pred cccccccCccEEEEEEc-cCCC
Q 022184 281 WSKRLHLGTSIALVEFC-PTQR 301 (301)
Q Consensus 281 ~~~~~~~~~~v~~~~~s-pdg~ 301 (301)
.+. .+ ...+++++|. ||++
T Consensus 235 ~i~-~p-~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 235 TVK-LP-VDKTTSCCFGGKNYS 254 (297)
T ss_dssp EEE-CS-SSBEEEEEEESGGGC
T ss_pred EEE-CC-CCCceEEEEeCCCCC
Confidence 663 34 4679999998 8764
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.70 E-value=1.4e-14 Score=115.36 Aligned_cols=225 Identities=14% Similarity=0.055 Sum_probs=150.4
Q ss_pred CCcceEEEECCCCCeEEE-------EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC-CCEEEEeecCC
Q 022184 63 EGDPMTIAVNPSGDDFVC-------STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGVDG 134 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~-------~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg 134 (301)
-..+.+++|+++++.+++ ...++.|.+|+..+++...... .....+...+.+++++++ ++++++ +..+
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~ 92 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK---PEVNGYGGIPAGCQCDRDANQLFVA-DMRL 92 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC---CEETTEECCEEEEEECSSSSEEEEE-ETTT
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe---cccCCCCCCCceEEEecCCCcEEEE-ECCC
Confidence 445789999999987777 4677889999976665421110 000012356889999999 664444 4445
Q ss_pred eEEEEeCCCcceecc-ccc----CCccEEEEEecCCCcEEEEEeCC---------------CcEEEEeCCCCceEEEEee
Q 022184 135 HLRIMHWPSLRIILD-EPK----AHKSVLDMDFSLDSEFLATTSTD---------------GSARIWKTEDGVAWTFLTR 194 (301)
Q Consensus 135 ~i~v~d~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~ 194 (301)
.|.+||.. ++.... ... ....+.+++++|+|+++++...+ +.|..||.. ++......
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~- 169 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT- 169 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-
Confidence 79999987 654322 111 11358899999999887776655 567777765 55433322
Q ss_pred cCCCCeeEEEEc----cCCCcceEEEEEEeCCcceEEEEEcc-CceE-----eeeeeccC-CCcEEEEEcCCCCEEEEee
Q 022184 195 NSDEKIELCRFS----KDGTKPFLFCTVQRGDKALLAVYDIS-TWNK-----IGHKRLLR-KPASVLSISLDGKYLAMGS 263 (301)
Q Consensus 195 ~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~-----~~~~~~~~-~~v~~~~~s~~~~~l~~~~ 263 (301)
.. .....++|+ |+++.+ .++...++.|.+||.. +++. ...+..+. ..+..++++++|+++++..
T Consensus 170 ~~-~~~~~i~~~~~~d~dg~~l----~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 170 AF-QFPNGIAVRHMNDGRPYQL----IVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EE-SSEEEEEEEECTTSCEEEE----EEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred CC-CCcceEEEecccCCCCCEE----EEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 22 236889999 998752 2444567899999986 3432 12222222 4578899999999888877
Q ss_pred CCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 264 KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 264 ~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.++.|.+||..+++....+ ..+ ...+.+++|+|||+
T Consensus 245 ~~~~i~~~d~~~g~~~~~~-~~~-~~~~~~i~~~~dg~ 280 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRI-RCP-FEKPSNLHFKPQTK 280 (314)
T ss_dssp TTTEEEEECTTCBSCSEEE-ECS-SSCEEEEEECTTSS
T ss_pred CCCEEEEEcCCCCcEeEEE-eCC-CCCceeEEECCCCC
Confidence 8889999999877665544 334 56799999999985
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=5.7e-15 Score=119.98 Aligned_cols=235 Identities=9% Similarity=-0.022 Sum_probs=141.2
Q ss_pred EEeeeecCCCccEEEecCCcc----ccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec-
Q 022184 9 CGSWIKRPENVNLVVLGKSSR----ASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT- 83 (301)
Q Consensus 9 ~~~w~~~~~~~~~~~~g~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~- 83 (301)
.++|+|+ ++.+.++.... ....++.+.+|+.. .............-..+...+..++++|+|++|+++..
T Consensus 54 ~i~~spd---g~~lyv~~~~~~~~~~g~~~~~v~v~d~~--t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~ 128 (361)
T 2oiz_A 54 HVQVSND---GKKIYTMTTYHERITRGKRSDVVEVWDAD--KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS 128 (361)
T ss_dssp EEEECTT---SSEEEEEEEEETTSSSSCEEEEEEEEETT--TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES
T ss_pred ceEECCC---CCEEEEEEecccccccCCCCCEEEEEECc--CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC
Confidence 7889977 45555533100 00124566777543 22221110000000012356788999999999998864
Q ss_pred -CCcEEEEEEcCCccccc-ccccc------CCC-------CCCCCCeeE---------------------------EEEe
Q 022184 84 -NGGCKLFEVYGGATDIN-LLAKK------MPP-------LQDAGPQKC---------------------------LSFS 121 (301)
Q Consensus 84 -d~~i~~w~~~~~~~~~~-~~~~~------~~~-------~~~~~~v~~---------------------------~~~s 121 (301)
+++|.+||+.+++.... +.... ... ....+.+.. +.++
T Consensus 129 ~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (361)
T 2oiz_A 129 PATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPA 208 (361)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEec
Confidence 57899999987765333 21100 000 000011111 1223
Q ss_pred eCCCEEEEeecCCeEEEEeCCCccee--cccc--c----C----CccEEEEEecCCCcEEEEEeC-----------CCcE
Q 022184 122 VDGSRFAAGGVDGHLRIMHWPSLRII--LDEP--K----A----HKSVLDMDFSLDSEFLATTST-----------DGSA 178 (301)
Q Consensus 122 ~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~--~----~----~~~i~~~~~~~~~~~l~~~~~-----------d~~i 178 (301)
+++..++..+.++.+.++|+...... ..+. . . ......++++|+++.++++.. .+.|
T Consensus 209 ~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v 288 (361)
T 2oiz_A 209 LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEI 288 (361)
T ss_dssp ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEE
T ss_pred ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceE
Confidence 44445555556677888887543311 0000 0 0 011123789999887776543 3479
Q ss_pred EEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc--eEeeeeeccCCCcEEEEEcCCC
Q 022184 179 RIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW--NKIGHKRLLRKPASVLSISLDG 256 (301)
Q Consensus 179 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~s~~~ 256 (301)
.+||+.+++.+..+..+. +..++|+|+|++ +++++. +.|.+||..++ +.+..+.........++++|+|
T Consensus 289 ~viD~~t~~~v~~i~~~~---p~~ia~spdg~~-----l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 289 WVMDTKTKQRVARIPGRD---ALSMTIDQQRNL-----MLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp EEEETTTTEEEEEEECTT---CCEEEEETTTTE-----EEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred EEEECCCCcEEEEEecCC---eeEEEECCCCCE-----EEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 999999999999887654 899999999997 344455 89999999999 8887776667778999999998
Q ss_pred C
Q 022184 257 K 257 (301)
Q Consensus 257 ~ 257 (301)
+
T Consensus 360 ~ 360 (361)
T 2oiz_A 360 G 360 (361)
T ss_dssp C
T ss_pred C
Confidence 5
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=2.3e-14 Score=122.38 Aligned_cols=199 Identities=11% Similarity=0.056 Sum_probs=147.5
Q ss_pred CCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC--Ccceeccc
Q 022184 73 PSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP--SLRIILDE 150 (301)
Q Consensus 73 ~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~--~~~~~~~~ 150 (301)
|.+..+++...+++|.++|..+++....+. ....+..+.|+|||+++++++.++.|.+||+. +++.+.++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~--------~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLD--------TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEE--------CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEe--------CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 344466677778999999998876633322 22356789999999999999999999999995 77776666
Q ss_pred ccCCccEEEEEec----CCCcEEEEEe-CCCcEEEEeCCCCceEEEEeecC----------CCCeeEEEEccCCCcceEE
Q 022184 151 PKAHKSVLDMDFS----LDSEFLATTS-TDGSARIWKTEDGVAWTFLTRNS----------DEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 151 ~~~~~~i~~~~~~----~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~ 215 (301)
... .....++|+ |||++++++. .++++.++|..+.+.+..+.... ...+..+..++++.. +
T Consensus 237 ~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~-~-- 312 (567)
T 1qks_A 237 KIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE-F-- 312 (567)
T ss_dssp ECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE-E--
T ss_pred ecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCE-E--
Confidence 543 346789999 6999887766 55899999999999888775321 225778889998765 2
Q ss_pred EEEEeCCcceEEEEEccCceEeeee-eccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCceeeccccc
Q 022184 216 CTVQRGDKALLAVYDISTWNKIGHK-RLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKR 284 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~ 284 (301)
++.....+.|.++|....+.+... .........+.|+|+|++++++. .++.|.++|+.++++...+..
T Consensus 313 -vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 313 -IVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp -EEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred -EEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 355578899999998765432211 12234567889999999987765 568999999999987765543
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.67 E-value=1.2e-14 Score=129.15 Aligned_cols=249 Identities=11% Similarity=-0.022 Sum_probs=151.0
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 85 (301)
.+...+|+|| ++.+|.+.... +.+ ...||.++..+...... .+ +...+..++|+|| +.|+.++.++
T Consensus 164 ~~~~~~~SPD---G~~la~~~~~~--G~e-~~~i~v~dl~tg~~~~~-----~~--~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 164 ALDAWAASDD---GRLLAYSVQDG--GSD-WRTVKFVGVADGKPLAD-----EL--KWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEEECTT---SSEEEEEEEET--TCS-EEEEEEEETTTCCEEEE-----EE--EEEESCCCEESTT-SEEEEEECCC
T ss_pred EEEeEEECCC---CCEEEEEEcCC--CCc-eEEEEEEECCCCCCCCc-----cC--CCceeccEEEECC-CEEEEEEecC
Confidence 5778999988 66777654321 121 12344444444333211 11 1222467899999 9998887665
Q ss_pred c--------------EEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC-----eEEEEeCCCc--
Q 022184 86 G--------------CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG-----HLRIMHWPSL-- 144 (301)
Q Consensus 86 ~--------------i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~v~d~~~~-- 144 (301)
. |++|++.++.....+... ...+...+..+.|||||++|+..+.++ .|++||+.++
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~---~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~ 306 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA---TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI 306 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEEC---CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEec---cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC
Confidence 4 888887665432222111 111223578999999999988877544 8999999776
Q ss_pred ceecccccCCccEEEEEecCCCcEEEEEeCC----CcEEEEeCCCC-ceEEEEeecCCCCeeEEEEccCCCcceEEEEEE
Q 022184 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTD----GSARIWKTEDG-VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (301)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (301)
+....+..+........ +|+|+.|+..+.+ +.|.+||+.++ .....+..+....+..++|+ +..+ +++
T Consensus 307 ~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~l----v~~ 379 (741)
T 1yr2_A 307 GPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRL----FAS 379 (741)
T ss_dssp CCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEE----EEE
T ss_pred cccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEE----EEE
Confidence 31334444444444443 4889888877753 45999999875 23344444444456677776 3331 345
Q ss_pred eCCcceEEEEEcc-CceEeeeeec-cCCCcEEEEEcCCCCEEEEe----eCCCcEEEEeCCCcee
Q 022184 220 RGDKALLAVYDIS-TWNKIGHKRL-LRKPASVLSISLDGKYLAMG----SKDGDICVVDVKKMEI 278 (301)
Q Consensus 220 ~~~~~~i~~~d~~-~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~----~~d~~i~i~~~~~~~~ 278 (301)
...++..++|.+. +++....+.. ....+..+.++|+++.|+.. ...+.|++||+.+++.
T Consensus 380 ~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 380 YIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 5556665555443 3444444443 24567889999998766633 2347899999988764
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.67 E-value=3e-13 Score=110.05 Aligned_cols=220 Identities=7% Similarity=-0.064 Sum_probs=144.4
Q ss_pred EEEECCCCCeEEEEe----------cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec--CCe
Q 022184 68 TIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV--DGH 135 (301)
Q Consensus 68 ~~~~~~~~~~l~~~~----------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~ 135 (301)
.++++|||++++++. .++.|.+||..+.+....+................+.|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 999999999998875 36789999998765533322110000111123468999999999998874 478
Q ss_pred EEEEeCCCcceecc-cccCCccEEEEEecCCC-cEEEEEeCCCcEEEEeCCCCceEEEEee----cCCCC-eeEEEEccC
Q 022184 136 LRIMHWPSLRIILD-EPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLTR----NSDEK-IELCRFSKD 208 (301)
Q Consensus 136 i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~~-v~~~~~~~~ 208 (301)
|.++| .+++.+.. +... . ++.+.|++ +.+++.+.||.+.++|. +++....... ....+ .....+.++
T Consensus 150 v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 99887666 4322 2 24455655 35667778999999999 8776643221 11111 123456777
Q ss_pred CCcceEEEEEEeCCcceEEEEEccCce--Eeeeeecc----------CCCcEEEEEcCCCCEEEEeeC----------CC
Q 022184 209 GTKPFLFCTVQRGDKALLAVYDISTWN--KIGHKRLL----------RKPASVLSISLDGKYLAMGSK----------DG 266 (301)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~----------~~~v~~~~~s~~~~~l~~~~~----------d~ 266 (301)
+..+ +..+..+.+.+.|+.+.. .+..+... ......+.++|+++.++++.. .+
T Consensus 224 ~~~~-----~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 224 SGRI-----VWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred CCEE-----EEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 6652 222356789999987542 22222110 122344789999988888653 35
Q ss_pred cEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 267 DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 267 ~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.|.++|+.+++.+..+.. .....+++|+|||+
T Consensus 299 ~V~VID~~t~~vv~~i~~---g~~p~~i~~s~Dg~ 330 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQISL---GHDVDAISVAQDGG 330 (373)
T ss_pred eEEEEECCCCEEEEEEEC---CCCcCeEEECCCCC
Confidence 799999999999887743 34689999999986
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.66 E-value=5.7e-15 Score=119.41 Aligned_cols=177 Identities=10% Similarity=-0.001 Sum_probs=132.6
Q ss_pred cceEEEECCCCCeEEEEecCCcEEEEEEcCCcccc-----ccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEE
Q 022184 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDI-----NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~ 139 (301)
.+..+++++....+++|+.++ +.+|+++..+... ... ......... |+.++| |+++|+++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~--~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLT--FKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCC--CSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcccccccc--ceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 689999999999999999887 7789986544100 000 001112345 999999 89999998 78999999
Q ss_pred eCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEE
Q 022184 140 HWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (301)
Q Consensus 140 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (301)
|+++.........+..++.++.+.+. .+++++.||.+.+||+.++.... +. ..|++++|+|+| . +.
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~----~~Vs~v~WSpkG-~------~v 177 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LA----QNVTSFDVTNSQ-L------AV 177 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EE----ESEEEEEECSSE-E------EE
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-cc----CCceEEEEcCCc-e------EE
Confidence 99876654445556667888777654 38889999999999999877643 21 259999999999 2 45
Q ss_pred eCCcceEEEEEccCceE--eeee------e---ccCCCcEEEEEcCCCCEEEEe
Q 022184 220 RGDKALLAVYDISTWNK--IGHK------R---LLRKPASVLSISLDGKYLAMG 262 (301)
Q Consensus 220 ~~~~~~i~~~d~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~l~~~ 262 (301)
+..||.+++|+....+. ...+ . .+...|.++.|.+++.++++=
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 67789999999887764 3334 2 256789999999999988873
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=7.4e-13 Score=104.52 Aligned_cols=224 Identities=9% Similarity=0.060 Sum_probs=154.5
Q ss_pred ccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEe
Q 022184 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMH 140 (301)
Q Consensus 61 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d 140 (301)
.....+.++++.++|+..++...++.|.+|+.. ++... .. .. .....+..++++++++++++...++.|..+|
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~---~~--~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FE---VP--TPDAKVMCLIVSSLGDIWFTENGANKIGKLS 89 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EE---CS--STTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EE---CC--CCCCcceeEEECCCCCEEEEecCCCeEEEEC
Confidence 345678999999999877776677889999876 43211 11 11 1235688999999998777766678899999
Q ss_pred CCCcceec-ccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEE
Q 022184 141 WPSLRIIL-DEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (301)
Q Consensus 141 ~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (301)
.. ++... ........+..+++.++++++++...++.|..+|.. ++............+..+++.++++. .++
T Consensus 90 ~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l-----~v~ 162 (300)
T 2qc5_A 90 KK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL-----WFT 162 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE-----EEE
T ss_pred CC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE-----EEE
Confidence 87 54421 222233578999999999988877778899999987 55443222222345889999999984 344
Q ss_pred eCCcceEEEEEccCceEeee-eeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEcc
Q 022184 220 RGDKALLAVYDISTWNKIGH-KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP 298 (301)
Q Consensus 220 ~~~~~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~sp 298 (301)
...++.|..+|. +++.... .......+..++++++|++.++....+.|.+|+. +++........+ ...+.++++++
T Consensus 163 ~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d~ 239 (300)
T 2qc5_A 163 ENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTP-NARPHAITAGK 239 (300)
T ss_dssp ETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECS
T ss_pred ecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCC-CCCceEEEECC
Confidence 555778999998 4444321 1123356889999999987777666778999998 554433322223 45688999999
Q ss_pred CCC
Q 022184 299 TQR 301 (301)
Q Consensus 299 dg~ 301 (301)
+|+
T Consensus 240 ~g~ 242 (300)
T 2qc5_A 240 NSE 242 (300)
T ss_dssp TTC
T ss_pred CCC
Confidence 874
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.65 E-value=2e-13 Score=108.70 Aligned_cols=204 Identities=10% Similarity=0.033 Sum_probs=133.9
Q ss_pred cCCcceEEEECCC-CCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC-------
Q 022184 62 SEGDPMTIAVNPS-GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD------- 133 (301)
Q Consensus 62 h~~~v~~~~~~~~-~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------- 133 (301)
+...+.+++++++ ++.+++. ..+.|.+|+.+ ++....... .........+.+++++++|+++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKK--DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSB--CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC
T ss_pred CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEec--cCCCccccCCcCEEECCCCCEEEEecCcccccccc
Confidence 4567899999999 6645544 44468899887 443111011 0001122457899999999877776554
Q ss_pred --------CeEEEEeCCCcceecccccCCccEEEEEec----CCCcEEEEE-eCCCcEEEEeCC-CCceE--EEEee--c
Q 022184 134 --------GHLRIMHWPSLRIILDEPKAHKSVLDMDFS----LDSEFLATT-STDGSARIWKTE-DGVAW--TFLTR--N 195 (301)
Q Consensus 134 --------g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~d~~i~i~d~~-~~~~~--~~~~~--~ 195 (301)
+.|..++.. ++.. .+..+......++|+ |+++.++.+ ..++.|.+||++ +++.. ..+.. .
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp CBTTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred cccccCCCCeEEEECCC-CCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 567777765 4432 222233456889999 999765544 567899999986 44321 11111 1
Q ss_pred CC-CCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEe-eCCCcEEEEeC
Q 022184 196 SD-EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMG-SKDGDICVVDV 273 (301)
Q Consensus 196 ~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~~~ 273 (301)
.. ..+..++++++|.. .++...++.|.+||.++++.+..+..+...+.+++|+|+++.|+++ ..++.|..|++
T Consensus 223 ~~~~~p~~i~~d~~G~l-----~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 223 THEGGADGMDFDEDNNL-----LVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CSSCEEEEEEEBTTCCE-----EEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCceEECCCCCE-----EEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 11 35788999999974 3444457789999998776665566566788999999999955555 45678999998
Q ss_pred CCc
Q 022184 274 KKM 276 (301)
Q Consensus 274 ~~~ 276 (301)
...
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 753
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.65 E-value=3.8e-13 Score=107.78 Aligned_cols=215 Identities=13% Similarity=0.014 Sum_probs=141.2
Q ss_pred cceEEEECCCCCeE-EEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCC
Q 022184 65 DPMTIAVNPSGDDF-VCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (301)
Q Consensus 65 ~v~~~~~~~~~~~l-~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 143 (301)
-...+.|+|++..+ ++...++.|..|+.++++... . .....+.+++|+|+|+++++. .+ .|.+||..+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~--~-------~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~ 118 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV--H-------ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTAT 118 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE--E-------ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTT
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE--E-------ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCC
Confidence 35678999976544 455567889999987664311 1 123468999999999876654 34 499999887
Q ss_pred cceeccccc----CCccEEEEEecCCCcEEEEEeC------CCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcce
Q 022184 144 LRIILDEPK----AHKSVLDMDFSLDSEFLATTST------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (301)
Q Consensus 144 ~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (301)
++....... ....+.+++++|+|+++++... .+.|..++ +++.. .+... ......++|+|+++.++
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~-~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD-ISIPNSICFSPDGTTGY 194 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE-ESSEEEEEECTTSCEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC-CcccCCeEEcCCCCEEE
Confidence 764321111 1236889999999997665542 23455555 44433 33222 12467899999998632
Q ss_pred EEEEEEeCCcceEEEEEcc--Cc-eE-----eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccccc
Q 022184 214 LFCTVQRGDKALLAVYDIS--TW-NK-----IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285 (301)
Q Consensus 214 ~~~~~~~~~~~~i~~~d~~--~~-~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 285 (301)
++...++.|.+||+. ++ +. ...+......+..++++++|++.++...++.|.+|+. +++.+..+ ..
T Consensus 195 ----v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i-~~ 268 (326)
T 2ghs_A 195 ----FVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY-EV 268 (326)
T ss_dssp ----EEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE-EC
T ss_pred ----EEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE-EC
Confidence 445567899999986 55 31 1112122345678999999987777766788999998 56655544 33
Q ss_pred ccCccEEEEEEc-cCCC
Q 022184 286 HLGTSIALVEFC-PTQR 301 (301)
Q Consensus 286 ~~~~~v~~~~~s-pdg~ 301 (301)
+ ...+++++|+ ||++
T Consensus 269 ~-~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 269 P-GKQTTCPAFIGPDAS 284 (326)
T ss_dssp S-CSBEEEEEEESTTSC
T ss_pred C-CCCcEEEEEecCCCC
Confidence 4 4579999998 8764
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.63 E-value=9.8e-14 Score=114.45 Aligned_cols=223 Identities=8% Similarity=-0.074 Sum_probs=148.4
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC--eEEEEeC
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG--HLRIMHW 141 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~v~d~ 141 (301)
..+..++|+++++.+++...++.|++||.+++....... ...... ++|+|+++.|+++..++ .|.+++.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~--------~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP--------GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE--------TCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec--------cCCCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 468899999999877776667899999988765422111 112234 89999999988888765 7888887
Q ss_pred CCcceeccc----ccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEE---eecCCCC-ee-EEEEccCCCcc
Q 022184 142 PSLRIILDE----PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFL---TRNSDEK-IE-LCRFSKDGTKP 212 (301)
Q Consensus 142 ~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~~-v~-~~~~~~~~~~~ 212 (301)
..+.....+ ......+.+++++|++..|+.+..++.|+.||..++...... ....... .. .++|+|++..+
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 655432222 113356788999995555555777889999999877633220 1111111 13 99999975553
Q ss_pred eEEEEEEeCCcceEEEEEccCceEeeeeecc---------------CCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCc
Q 022184 213 FLFCTVQRGDKALLAVYDISTWNKIGHKRLL---------------RKPASVLSISLDGKYLAMGS-KDGDICVVDVKKM 276 (301)
Q Consensus 213 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~ 276 (301)
.++...++.|..||.... +..+... -.....++++|+|+++++-. .+++|+.|++.++
T Consensus 282 ----yv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 282 ----YMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp ----EEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred ----EEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 355667889999997653 2222222 13478899999999777777 7889999998888
Q ss_pred eeecccccc-c-----------cCccEEEEEEccCCC
Q 022184 277 EINHWSKRL-H-----------LGTSIALVEFCPTQR 301 (301)
Q Consensus 277 ~~~~~~~~~-~-----------~~~~v~~~~~spdg~ 301 (301)
+........ . .-.....++++|+|+
T Consensus 356 ~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~ 392 (409)
T 3hrp_A 356 YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG 392 (409)
T ss_dssp EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE
T ss_pred EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC
Confidence 754432110 0 013588999999873
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.63 E-value=1.7e-13 Score=110.46 Aligned_cols=244 Identities=12% Similarity=0.006 Sum_probs=156.1
Q ss_pred eEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe----------cCCcEEEEEEcCCccccccccccCC
Q 022184 38 EIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLAKKMP 107 (301)
Q Consensus 38 ~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~~w~~~~~~~~~~~~~~~~~ 107 (301)
.++.+|........ .+..-..+ . ++++|||++++++. .++.|.+||..+.+....+....-.
T Consensus 60 ~V~ViD~~t~~v~~------~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~ 131 (386)
T 3sjl_D 60 QQFVIDGEAGRVIG------MIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 131 (386)
T ss_dssp EEEEEETTTTEEEE------EEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred EEEEEECCCCeEEE------EEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc
Confidence 55556666554432 12222233 4 99999999888765 3678999999888764443221100
Q ss_pred CCCCCCCeeEEEEeeCCCEEEEeec--CCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCC
Q 022184 108 PLQDAGPQKCLSFSVDGSRFAAGGV--DGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTED 185 (301)
Q Consensus 108 ~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 185 (301)
..........+.|+|||++++++.. ++.|.++|+.+++.+.++.... . ...+....+.+++.+.||++.+.++..
T Consensus 132 r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 132 RFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred ccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCC
Confidence 1111234567999999999988864 6899999999998877764322 1 122333445677888899999999876
Q ss_pred -CceEEEEeecC---CCCe-eEEEEc-cCCCcceEEEEEEeCCcceEEEEEccCce--Eeeeeec----------cCCCc
Q 022184 186 -GVAWTFLTRNS---DEKI-ELCRFS-KDGTKPFLFCTVQRGDKALLAVYDISTWN--KIGHKRL----------LRKPA 247 (301)
Q Consensus 186 -~~~~~~~~~~~---~~~v-~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~----------~~~~v 247 (301)
++......... ..++ ....|. ++|+. +..+.++.|.+.|+.+.. ....+.. .....
T Consensus 209 ~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~------~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~ 282 (386)
T 3sjl_D 209 EGTPEITHTEVFHPEDEFLINHPAYSQKAGRL------VWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 282 (386)
T ss_dssp SSCCEEEECCCCSCTTSCBCSCCEEETTTTEE------EEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS
T ss_pred CCeEEEeecceeccccccccccceeEcCCCcE------EEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCc
Confidence 55433221111 1112 124564 67763 334557899999997653 2222210 11234
Q ss_pred EEEEEcCCCCEEEEeeC----------CCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 248 SVLSISLDGKYLAMGSK----------DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 248 ~~~~~s~~~~~l~~~~~----------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
..++++|+++.+++... .+.|.++|+.+++.+..+..+ ..+++++++|||+
T Consensus 283 q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~ 343 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEK 343 (386)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEECSSSS
T ss_pred ceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC---CCcceEEECCCCC
Confidence 45788999988888753 257999999999999887543 4788999999985
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.61 E-value=4.7e-14 Score=114.09 Aligned_cols=168 Identities=15% Similarity=0.082 Sum_probs=126.0
Q ss_pred CCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc---------eec-ccccCCccEEEEEecCCCcEEEEEeCCCcEEEEe
Q 022184 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR---------IIL-DEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWK 182 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~---------~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 182 (301)
.+++.+++++...++++|+.++ +.+|++.... ... ......+ |+.++| |+++|+++ .++.|++||
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 3688999999999999999875 6669875443 111 1223445 999999 89999998 889999999
Q ss_pred CCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEe
Q 022184 183 TEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMG 262 (301)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 262 (301)
+++.........+. ..+..+.+.+. . ++....||.|.+||+.++.... +...|++++|||+| ++.|
T Consensus 113 v~sl~~~~~~~~~~-~~v~~i~~~~p--~-----~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 113 LEELSEFRTVTSFE-KPVFQLKNVNN--T-----LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp SSSTTCEEEEEECS-SCEEEEEECSS--E-----EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEE
T ss_pred chhhhccCccceee-cceeeEEecCC--C-----EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEE
Confidence 98876655555443 45777776654 2 3566789999999999776543 34579999999999 7788
Q ss_pred eCCCcEEEEeCCCcee--ecccc-----c---cccCccEEEEEEccCC
Q 022184 263 SKDGDICVVDVKKMEI--NHWSK-----R---LHLGTSIALVEFCPTQ 300 (301)
Q Consensus 263 ~~d~~i~i~~~~~~~~--~~~~~-----~---~~~~~~v~~~~~spdg 300 (301)
..||++++|+...++. ...+. . +| ...|.++.|.+++
T Consensus 179 ~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~ 225 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVE-EYSPLSVTILSPQ 225 (388)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTT-TSEEEEEEESSSS
T ss_pred EcCCcEEEEcCCCccccccceecCCcccccccCC-CeeEEEEEEecCC
Confidence 9999999999887774 33331 1 35 6789999999876
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.60 E-value=8.7e-13 Score=104.25 Aligned_cols=229 Identities=10% Similarity=0.038 Sum_probs=140.9
Q ss_pred EEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcE
Q 022184 8 TCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGC 87 (301)
Q Consensus 8 ~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i 87 (301)
-+..|.++. ..++.+... .+ +|+.+++.+..... + .....+.+++++++|+++++ . +..|
T Consensus 16 Egp~w~~~~--~~l~~~d~~------~~--~i~~~d~~~~~~~~-------~-~~~~~~~~i~~~~dG~l~v~-~-~~~l 75 (297)
T 3g4e_A 16 ESPVWEEVS--NSLLFVDIP------AK--KVCRWDSFTKQVQR-------V-TMDAPVSSVALRQSGGYVAT-I-GTKF 75 (297)
T ss_dssp EEEEEETTT--TEEEEEETT------TT--EEEEEETTTCCEEE-------E-ECSSCEEEEEEBTTSSEEEE-E-TTEE
T ss_pred cCCeEECCC--CEEEEEECC------CC--EEEEEECCCCcEEE-------E-eCCCceEEEEECCCCCEEEE-E-CCeE
Confidence 356788542 445554332 22 45666665543211 1 23467999999999995554 4 4569
Q ss_pred EEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC---------CeEEEEeCCCcceecccccCCccEE
Q 022184 88 KLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD---------GHLRIMHWPSLRIILDEPKAHKSVL 158 (301)
Q Consensus 88 ~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------g~i~v~d~~~~~~~~~~~~~~~~i~ 158 (301)
.+||.++++..... . .........++.++++|+|+++++.... ..-.+|.+........+........
T Consensus 76 ~~~d~~~g~~~~~~-~--~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pn 152 (297)
T 3g4e_A 76 CALNWKEQSAVVLA-T--VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISN 152 (297)
T ss_dssp EEEETTTTEEEEEE-E--CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEE
T ss_pred EEEECCCCcEEEEE-e--cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecccccc
Confidence 99998766532111 1 1111122457889999999966654321 2234444432222222223334568
Q ss_pred EEEecCCCcEEE-EEeCCCcEEEEeC--CCCceE--EEEee--cCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEc
Q 022184 159 DMDFSLDSEFLA-TTSTDGSARIWKT--EDGVAW--TFLTR--NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI 231 (301)
Q Consensus 159 ~~~~~~~~~~l~-~~~~d~~i~i~d~--~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 231 (301)
.++|+||++.|+ +.+.++.|.+||+ .++... ..+.. .....+..+++.++|+. .++....+.|..||.
T Consensus 153 gi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l-----wva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKL-----WVACYNGGRVIRLDP 227 (297)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCE-----EEEEETTTEEEEECT
T ss_pred ceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCE-----EEEEcCCCEEEEEcC
Confidence 899999998664 4556788999987 455432 12221 11235788999999974 344445678999999
Q ss_pred cCceEeeeeeccCCCcEEEEEc-CCCCEEEEeeC
Q 022184 232 STWNKIGHKRLLRKPASVLSIS-LDGKYLAMGSK 264 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~ 264 (301)
.+++.+..+..+...+++++|. |+++.|++++.
T Consensus 228 ~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 228 VTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 9888888887776789999998 88887766654
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.60 E-value=1.9e-12 Score=106.70 Aligned_cols=238 Identities=9% Similarity=-0.012 Sum_probs=148.7
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 85 (301)
....++|.++ ++++++.. ..+ +|+.+++.+..+.. .... ..... ++|+++++.|+++..++
T Consensus 132 ~P~~la~d~~---g~lyv~d~------~~~--~I~~id~~~g~~~~------~~~~-~~~~~-ia~~~~g~~l~~~d~~~ 192 (409)
T 3hrp_A 132 YMWGIAAVGN---NTVLAYQR------DDP--RVRLISVDDNKVTT------VHPG-FKGGK-PAVTKDKQRVYSIGWEG 192 (409)
T ss_dssp CEEEEEECST---TEEEEEET------TTT--EEEEEETTTTEEEE------EEET-CCBCB-CEECTTSSEEEEEBSST
T ss_pred CceEEEEeCC---CCEEEEec------CCC--cEEEEECCCCEEEE------eecc-CCCCc-eeEecCCCcEEEEecCC
Confidence 4567888865 44555433 123 34455555443321 1111 23344 99999999999888766
Q ss_pred --cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecc----cccCCcc--E
Q 022184 86 --GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD----EPKAHKS--V 157 (301)
Q Consensus 86 --~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~----~~~~~~~--i 157 (301)
.|.+++.......... .. .. ......+.+++++|++..|+++..++.|+.||..++..... ....... .
T Consensus 193 ~~~I~~~d~~~~~~~~~~-g~-~~-~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 193 THTVYVYMKASGWAPTRI-GQ-LG-STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp TCEEEEEEGGGTTCEEEE-EE-CC-TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSC
T ss_pred CceEEEEEcCCCceeEEe-ee-cc-chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCcc
Confidence 6777776554331111 00 00 01234567899999555566677788999999887653221 1111111 1
Q ss_pred EEEEecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEeecC--------------CCCeeEEEEccCCCcceEEEEEEeC-
Q 022184 158 LDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNS--------------DEKIELCRFSKDGTKPFLFCTVQRG- 221 (301)
Q Consensus 158 ~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~~~~~~~~~~- 221 (301)
..++|+|+ +.++++-..++.|+.|+.... ...+.... -.....++++|+|+. .++..
T Consensus 270 ~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l-----yvad~~ 342 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF-----YIVDGF 342 (409)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE-----EEEETT
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE-----EEEeCC
Confidence 28999995 666666667889999997643 33333321 124789999999984 45666
Q ss_pred CcceEEEEEccCceEeeeeecc---------------CCCcEEEEEcCCCCEEEEeeCCCcEEEEeC
Q 022184 222 DKALLAVYDISTWNKIGHKRLL---------------RKPASVLSISLDGKYLAMGSKDGDICVVDV 273 (301)
Q Consensus 222 ~~~~i~~~d~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~ 273 (301)
.++.|+.||+.+++.. .+..+ -.....++++++|.++++-..+++|+.+++
T Consensus 343 ~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 343 KGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 7889999998777643 23222 135788999999887777778888888765
No 212
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.59 E-value=6.3e-13 Score=107.93 Aligned_cols=267 Identities=10% Similarity=0.059 Sum_probs=160.4
Q ss_pred CcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEE-----------C--CCCCeEEEE-ecCCcEEEEEEcCCccc
Q 022184 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAV-----------N--PSGDDFVCS-TTNGGCKLFEVYGGATD 98 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-----------~--~~~~~l~~~-~~d~~i~~w~~~~~~~~ 98 (301)
....+.+.+.+++.....+ ......+..-.+....+.| + +++++|+.. ..+++|+++|+.+....
T Consensus 41 ~~d~la~vDvdp~s~ty~~-vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~ 119 (462)
T 2ece_A 41 RADFIAVVDVNPKSETYSK-IVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPRE 119 (462)
T ss_dssp CCCEEEEEECCTTSTTTTS-EEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTS
T ss_pred CCCeEEEEECCCCCCCcce-EEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCC
Confidence 4556777778775432211 1111122222223333444 6 788877755 45789999999755322
Q ss_pred cccccccC-CCC---CCCCCeeEEEEeeCCCEEEEeecC------CeEEEEeCCCcceecccccCCc---cEEEEEecCC
Q 022184 99 INLLAKKM-PPL---QDAGPQKCLSFSVDGSRFAAGGVD------GHLRIMHWPSLRIILDEPKAHK---SVLDMDFSLD 165 (301)
Q Consensus 99 ~~~~~~~~-~~~---~~~~~v~~~~~s~~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~---~i~~~~~~~~ 165 (301)
.++..... ..+ ........+..+|+| +++++..+ |.|.++|.++++.+.+...... --..+-|+|+
T Consensus 120 p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~ 198 (462)
T 2ece_A 120 PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLP 198 (462)
T ss_dssp CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETT
T ss_pred ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCC
Confidence 22211100 000 011244567888999 66666555 7899999999988777753322 2346888999
Q ss_pred CcEEEEEe-------------------CCCcEEEEeCCCCceEEEEeec-CCCCeeEEEE--ccCCCcceEEEEEE-eCC
Q 022184 166 SEFLATTS-------------------TDGSARIWKTEDGVAWTFLTRN-SDEKIELCRF--SKDGTKPFLFCTVQ-RGD 222 (301)
Q Consensus 166 ~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~--~~~~~~~~~~~~~~-~~~ 222 (301)
++.+++.. .+.+|.+||+.+++.+.++... .......+.| +|++++.|+.+-++ ...
T Consensus 199 ~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L 278 (462)
T 2ece_A 199 NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDL 278 (462)
T ss_dssp TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTC
T ss_pred CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCC
Confidence 99888874 3689999999998888887754 2223455656 99999854322100 114
Q ss_pred cceEEEEEccCceE--eeee--ec----------------cCCCcEEEEEcCCCCEEEEeeC-CCcEEEEeCCC---cee
Q 022184 223 KALLAVYDISTWNK--IGHK--RL----------------LRKPASVLSISLDGKYLAMGSK-DGDICVVDVKK---MEI 278 (301)
Q Consensus 223 ~~~i~~~d~~~~~~--~~~~--~~----------------~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~---~~~ 278 (301)
+++|.+|....++. ...+ .. .......+.+||||++|+++.. .+.|.+||+.. .++
T Consensus 279 ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~l 358 (462)
T 2ece_A 279 SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVL 358 (462)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 56777765544321 1111 00 0245788999999999998865 57899999863 344
Q ss_pred eccccccc-------c-----CccEEEEEEccCCC
Q 022184 279 NHWSKRLH-------L-----GTSIALVEFCPTQR 301 (301)
Q Consensus 279 ~~~~~~~~-------~-----~~~v~~~~~spdg~ 301 (301)
+..+..+- . .+....++++||||
T Consensus 359 v~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk 393 (462)
T 2ece_A 359 TGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGR 393 (462)
T ss_dssp EEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSS
T ss_pred EEEEEeCCeeccccccccccCCCCCCEEEEcCCCC
Confidence 44443220 0 01357899999996
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.59 E-value=5.1e-14 Score=124.13 Aligned_cols=223 Identities=10% Similarity=0.028 Sum_probs=144.3
Q ss_pred ccCCcceEEEECCCCCeEEEEec-----CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC-
Q 022184 61 ESEGDPMTIAVNPSGDDFVCSTT-----NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG- 134 (301)
Q Consensus 61 ~h~~~v~~~~~~~~~~~l~~~~~-----d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg- 134 (301)
+|...+..++|||||++||.+.. ...|++||+++++....... ......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~--------~~k~~~~~Ws-Dg~~l~y~~~~~~ 196 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK--------DVKFSGISWL-GNEGFFYSSYDKP 196 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE--------EEESCCCEEE-TTTEEEEEESSCC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC--------CceeccEEEe-CCCEEEEEEecCc
Confidence 45667899999999999985432 24799999998874221110 0112467899 999999888774
Q ss_pred ------------eEEEEeCCCcce----eccccc-CCccEEEEEecCCCcEEEEEeC----CCcEEEEeCCCCc-eEEEE
Q 022184 135 ------------HLRIMHWPSLRI----ILDEPK-AHKSVLDMDFSLDSEFLATTST----DGSARIWKTEDGV-AWTFL 192 (301)
Q Consensus 135 ------------~i~v~d~~~~~~----~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~-~~~~~ 192 (301)
.|++|++.+... +..... +......+.|+|||++|+.... +..|+++|+.++. ....+
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l 276 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV 276 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE
Confidence 399999876542 222222 2335778999999998765442 2489999998764 34445
Q ss_pred eecCCCCeeEEEEccCCCcceEEEEEEeC--CcceEEEEEccCceE--eeeeeccCCCcEEEEEcCCCCEEEEeeCCC--
Q 022184 193 TRNSDEKIELCRFSKDGTKPFLFCTVQRG--DKALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKDG-- 266 (301)
Q Consensus 193 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-- 266 (301)
..+.. ..... +++++..+++ .+.. ..+.|..+|+.++.. ...+..+...+. .|++++++|+....++
T Consensus 277 ~~~~~-~~~~~-~~~~g~~l~~---~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 277 QGDLD-ADVSL-VDNKGSTLYL---LTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp ECSSS-SCEEE-EEEETTEEEE---EECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE
T ss_pred eCCCC-ceEEE-EeccCCEEEE---EECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe
Confidence 44433 23333 7788876432 2221 247899999987653 233444555544 8999998887776544
Q ss_pred -cEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 267 -DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 267 -~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.|++|++..+...... ... ...+..+.++||++
T Consensus 350 ~~l~~~d~~g~~~~~l~-~p~-~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 350 ARVEQFDYEGKRVREVA-LPG-LGSVSGFNGKHDDP 383 (693)
T ss_dssp EEEEEECTTSCEEEEEC-CSS-SSEEEECCCCTTCS
T ss_pred eEEEEEECCCCeeEEee-cCC-CceEEeeecCCCCC
Confidence 6899999865543322 223 45677777777763
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.58 E-value=1.9e-12 Score=102.66 Aligned_cols=231 Identities=13% Similarity=0.079 Sum_probs=143.8
Q ss_pred eEEEeeeecCCCcc-EEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC
Q 022184 7 VTCGSWIKRPENVN-LVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (301)
Q Consensus 7 v~~~~w~~~~~~~~-~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 85 (301)
.....|.++ ++ ++.++.. .+ +|+.+++.+. . ..+..+...+..++++++|+.+++...++
T Consensus 47 ~egp~~~~~---g~~l~~~d~~------~~--~i~~~~~~g~-~-------~~~~~~~~~~~gl~~d~dG~l~v~~~~~~ 107 (305)
T 3dr2_A 47 SEGPAWWEA---QRTLVWSDLV------GR--RVLGWREDGT-V-------DVLLDATAFTNGNAVDAQQRLVHCEHGRR 107 (305)
T ss_dssp EEEEEEEGG---GTEEEEEETT------TT--EEEEEETTSC-E-------EEEEESCSCEEEEEECTTSCEEEEETTTT
T ss_pred ccCCeEeCC---CCEEEEEECC------CC--EEEEEeCCCC-E-------EEEeCCCCccceeeECCCCCEEEEECCCC
Confidence 356788876 44 4444332 23 3455555332 1 11233456789999999998666655567
Q ss_pred cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEE----eec-------------CCeEEEEeCCCcceec
Q 022184 86 GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAA----GGV-------------DGHLRIMHWPSLRIIL 148 (301)
Q Consensus 86 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~~-------------dg~i~v~d~~~~~~~~ 148 (301)
.|.+|+.+ ++. ..+... .. ......+..++++|+|+++++ |.. .+.|..+|..+++...
T Consensus 108 ~v~~~~~~-g~~-~~~~~~-~~-~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~ 183 (305)
T 3dr2_A 108 AITRSDAD-GQA-HLLVGR-YA-GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR 183 (305)
T ss_dssp EEEEECTT-SCE-EEEECE-ET-TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE
T ss_pred EEEEECCC-CCE-EEEEec-cC-CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE
Confidence 79998875 332 111110 00 011234678999999998876 332 2567888876665433
Q ss_pred ccccCCccEEEEEecCCCcEEEEEeCC------CcEEEEeCCCCceE--EEEeecCCCCeeEEEEccCCCcceEEEEEEe
Q 022184 149 DEPKAHKSVLDMDFSLDSEFLATTSTD------GSARIWKTEDGVAW--TFLTRNSDEKIELCRFSKDGTKPFLFCTVQR 220 (301)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 220 (301)
.. .......++|+||++.|+.+... +.|.+|++..+... ..+.......+..+++.++|+. ..+
T Consensus 184 ~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l------wv~ 255 (305)
T 3dr2_A 184 MA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL------WSS 255 (305)
T ss_dssp EE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE------EEC
T ss_pred Ee--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE------EEe
Confidence 22 33456789999999977777655 68999998765411 1221112234567899999983 444
Q ss_pred CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEe
Q 022184 221 GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVD 272 (301)
Q Consensus 221 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~ 272 (301)
..+ .|.+||.. ++.+..+.... .+..++|+|+++.|+.++.++ +..++
T Consensus 256 ~~~-gv~~~~~~-g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 256 SGT-GVCVFDSD-GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp CSS-EEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred cCC-cEEEECCC-CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 444 49999984 55665565544 588999999998888887764 44333
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=7.9e-13 Score=106.69 Aligned_cols=232 Identities=9% Similarity=-0.012 Sum_probs=146.4
Q ss_pred CcceEEEECCCCCeEEEEec--CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec-----CCeE
Q 022184 64 GDPMTIAVNPSGDDFVCSTT--NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-----DGHL 136 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i 136 (301)
..+..++++|+|+.+++... ++.++||.+.+++. ..+.........+...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 57899999999998888642 34366777653322 1111000111124467899999999876665443 5789
Q ss_pred EEEeCCCcceeccccc------CCccEEEEEecCCCc-EEEEEe---CCCcEEEEeCCCCceEEEEeecC----------
Q 022184 137 RIMHWPSLRIILDEPK------AHKSVLDMDFSLDSE-FLATTS---TDGSARIWKTEDGVAWTFLTRNS---------- 196 (301)
Q Consensus 137 ~v~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~-~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~---------- 196 (301)
.+||+.+++.+..+.. +...+..++++|++. .+++-. .++.|.+||+.+++....+..+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 9999998875544322 123568999998654 445554 57899999998887655442210
Q ss_pred ------------------CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC---ce-----Eee--eeeccCCCcE
Q 022184 197 ------------------DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST---WN-----KIG--HKRLLRKPAS 248 (301)
Q Consensus 197 ------------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---~~-----~~~--~~~~~~~~v~ 248 (301)
...+..++|+|+++.+| ++......+..++... +. ... ....+.....
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLY----LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEE----EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEE----EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 01257899999998632 2223334666665421 10 000 1112334566
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 249 VLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 249 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.++++++|+++++...++.|.+||..+++........+ ...+.+++|.++|+
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~-~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEK-LSWTDSFNFGSDGY 303 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGG-GSCEEEEEECTTSC
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCc-eecCCeeEECCCCc
Confidence 79999999988888888999999986666443332222 45689999999874
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.57 E-value=1.5e-12 Score=106.72 Aligned_cols=212 Identities=9% Similarity=-0.002 Sum_probs=135.0
Q ss_pred EEEECCCCCeEEEEe----------cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec--CCe
Q 022184 68 TIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV--DGH 135 (301)
Q Consensus 68 ~~~~~~~~~~l~~~~----------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~ 135 (301)
.++++|||++|+++. .++.|.++|..+.+....+................+.|+|||++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999888775 36789999998887644432210011101133467899999999998874 578
Q ss_pred EEEEeCCCcceecccccCCc-------cEEEEEecCCCcEEE-------------------------------------E
Q 022184 136 LRIMHWPSLRIILDEPKAHK-------SVLDMDFSLDSEFLA-------------------------------------T 171 (301)
Q Consensus 136 i~v~d~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~l~-------------------------------------~ 171 (301)
|.+.|+.+++.+..+..... .-.-+.++++|++++ .
T Consensus 202 VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~ 281 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW 281 (426)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE
Confidence 99999999887665543211 001133444444333 2
Q ss_pred EeCCCcEEEEeCCCCceEE--EEeec--C-------CCCeeEEEEccCCCcceEEEEEEeC-------CcceEEEEEccC
Q 022184 172 TSTDGSARIWKTEDGVAWT--FLTRN--S-------DEKIELCRFSKDGTKPFLFCTVQRG-------DKALLAVYDIST 233 (301)
Q Consensus 172 ~~~d~~i~i~d~~~~~~~~--~~~~~--~-------~~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~d~~~ 233 (301)
.+..+.+.+.|+....... .+... . ......++++|+++++|+.. ... ..+.|.++|..+
T Consensus 282 ~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~--~~~~~gthk~~s~~VsVID~~T 359 (426)
T 3c75_H 282 PTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLV--DQRDEWKHKAASRFVVVLNAET 359 (426)
T ss_dssp EBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEE--EECCTTCTTSCEEEEEEEETTT
T ss_pred EeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEe--cccccccccCCCCEEEEEECCC
Confidence 2333344444443322110 01000 0 01122378999998755321 111 246899999999
Q ss_pred ceEeeeeeccCCCcEEEEEcCCCC-EEEEee-CCCcEEEEeCCCceeeccc
Q 022184 234 WNKIGHKRLLRKPASVLSISLDGK-YLAMGS-KDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 234 ~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~d~~i~i~~~~~~~~~~~~ 282 (301)
.+.+..+.... ....+.|+|||+ ++++.. .++.|.++|+.+++.+..+
T Consensus 360 ~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 360 GERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99888776533 478899999999 888887 5899999999999988875
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.54 E-value=2.8e-11 Score=98.48 Aligned_cols=202 Identities=13% Similarity=0.048 Sum_probs=134.6
Q ss_pred cceEEEECCCCCeEEEEec--CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCC-CEEEEeecCCeEEEEeC
Q 022184 65 DPMTIAVNPSGDDFVCSTT--NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDG-SRFAAGGVDGHLRIMHW 141 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~v~d~ 141 (301)
....++|+|||++|+++.. ++.|.++| .+++....+ +... .++.+.|++ +.+++.+.||.+.++|.
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~-------i~~~---~~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQL-------LSSP---TCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEE-------cCCC---ceEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 4568999999999998874 47899999 877652220 1111 124556655 44566677999999999
Q ss_pred CCcceecccc-----cCCccE-EEEEecCCCcEEEEEeCCCcEEEEeCCCCce--EEEEeec---------CCCCeeEEE
Q 022184 142 PSLRIILDEP-----KAHKSV-LDMDFSLDSEFLATTSTDGSARIWKTEDGVA--WTFLTRN---------SDEKIELCR 204 (301)
Q Consensus 142 ~~~~~~~~~~-----~~~~~i-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~---------~~~~v~~~~ 204 (301)
+++...... ....++ ....+.+++..++..+..+.+.+.|+..+.. +..+... .......+.
T Consensus 195 -~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 195 -AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred -CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE
Confidence 776552211 111222 2345677666555555778999999975532 2222111 012244578
Q ss_pred EccCCCcceEEEEEEeC-------CcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCC-EEEEee-CCCcEEEEeCCC
Q 022184 205 FSKDGTKPFLFCTVQRG-------DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGK-YLAMGS-KDGDICVVDVKK 275 (301)
Q Consensus 205 ~~~~~~~~~~~~~~~~~-------~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~d~~i~i~~~~~ 275 (301)
++|+++.+|+. .... ..+.|.++|..+++.+..+.. ......++|+|||+ +++++. .++.|.++|+.+
T Consensus 274 ~s~d~~~lyV~--~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 274 YLKSSDGIYLL--TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred ECCCCCEEEEE--eccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 99999875431 1111 246899999999998887754 34679999999999 777776 489999999999
Q ss_pred ceeecc
Q 022184 276 MEINHW 281 (301)
Q Consensus 276 ~~~~~~ 281 (301)
++.+..
T Consensus 351 ~~vv~~ 356 (373)
T 2mad_H 351 GDQDQS 356 (373)
T ss_pred CCEEee
Confidence 998877
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=1.2e-12 Score=115.41 Aligned_cols=250 Identities=10% Similarity=0.045 Sum_probs=148.9
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
..+..++|+|| ++.+|.+..... +....|++++++ +...... .+. ......++|+ |++.|+.++.+
T Consensus 129 ~~l~~~~~SpD---g~~lAy~~~~~G-~~~~~i~v~dl~--tg~~~~~-----~~~--~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 129 TALDQLSFSRD---GRILAYSLSLAG-SDWREIHLMDVE--SKQPLET-----PLK--DVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp CEEEEEEECTT---SSEEEEEEECSS-CCEEEEEEEETT--TCSEEEE-----EEE--EEESCCCEEE-TTTEEEEEESS
T ss_pred EEEEEEEECCC---CCEEEEEEecCC-CceEEEEEEECC--CCCCCcc-----ccC--CceeccEEEe-CCCEEEEEEec
Confidence 35778899988 667776442111 122344555544 3332111 111 1113578899 99999988877
Q ss_pred Cc-------------EEEEEEcCCccccccccccCCCCC-CCCCeeEEEEeeCCCEEEEeec----CCeEEEEeCCCcc-
Q 022184 85 GG-------------CKLFEVYGGATDINLLAKKMPPLQ-DAGPQKCLSFSVDGSRFAAGGV----DGHLRIMHWPSLR- 145 (301)
Q Consensus 85 ~~-------------i~~w~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----dg~i~v~d~~~~~- 145 (301)
.. |++|++.+.......... ... +......+.|+|||++|+.... +..|+++|+.++.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~---~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFG---AIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEES---CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEe---cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 43 888888765432222111 111 2334678999999998865443 3589999997763
Q ss_pred eecccccCCccEEEEEecCCCcEEEEEe-CC---CcEEEEeCCCCce--EEEEeecCCCCeeEEEEccCCCcceEEEEEE
Q 022184 146 IILDEPKAHKSVLDMDFSLDSEFLATTS-TD---GSARIWKTEDGVA--WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (301)
Q Consensus 146 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d---~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (301)
....+..+....... |++++..|+..+ .+ +.|..+|+.++.. ...+..+... +. .|+++++++++ ...
T Consensus 272 ~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~--~~s~~g~~lv~--~~~ 345 (693)
T 3iuj_A 272 PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-VL--TVHSGSGYLFA--EYM 345 (693)
T ss_dssp CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CE--EEEEETTEEEE--EEE
T ss_pred ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-EE--EEEEECCEEEE--EEE
Confidence 233444444444444 666666555444 33 5789999987654 2344444433 33 89999987321 222
Q ss_pred eCCcceEEEEEccCceEeeeeec-cCCCcEEEEEcCCCCEEEEeeCC----CcEEEEeCCCcee
Q 022184 220 RGDKALLAVYDISTWNKIGHKRL-LRKPASVLSISLDGKYLAMGSKD----GDICVVDVKKMEI 278 (301)
Q Consensus 220 ~~~~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~~~ 278 (301)
......|.+||+..+.. ..+.. ....+..+.++|+++.++....+ +.++.||+.+++.
T Consensus 346 ~~g~~~l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 346 VDATARVEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp ETTEEEEEEECTTSCEE-EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCeeEEEEEECCCCee-EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 22334799999886543 33332 33456677888888777666544 7899999987653
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.54 E-value=8.5e-13 Score=104.74 Aligned_cols=217 Identities=9% Similarity=-0.032 Sum_probs=139.1
Q ss_pred ccCCcceEEEECCCCCe-EEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEE
Q 022184 61 ESEGDPMTIAVNPSGDD-FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (301)
Q Consensus 61 ~h~~~v~~~~~~~~~~~-l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~ 139 (301)
..........|+|+++. +++...++.|..|+.. ++. .... .....+..++++++|+++++...++.|.+|
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~--~~~~------~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV--DVLL------DATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE--EEEE------ESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE--EEEe------CCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 34556788999999984 5565667889999863 332 1111 133567899999999966665556789999
Q ss_pred eCCCcceecccccC-----CccEEEEEecCCCcEEEE----EeC-------------CCcEEEEeCCCCceEEEEeecCC
Q 022184 140 HWPSLRIILDEPKA-----HKSVLDMDFSLDSEFLAT----TST-------------DGSARIWKTEDGVAWTFLTRNSD 197 (301)
Q Consensus 140 d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~ 197 (301)
+.. ++.. .+... ...+.+++++|+|+++++ +.. .+.|..+|..+++..... ..
T Consensus 113 ~~~-g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~- 187 (305)
T 3dr2_A 113 DAD-GQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL- 187 (305)
T ss_dssp CTT-SCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE-
T ss_pred CCC-CCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC-
Confidence 975 4432 22111 124678999999998886 332 246778887666654433 22
Q ss_pred CCeeEEEEccCCCcceEEEEEEeCC-----cceEEEEEccCceEe--eee-eccCCCcEEEEEcCCCCEEEEeeCCCcEE
Q 022184 198 EKIELCRFSKDGTKPFLFCTVQRGD-----KALLAVYDISTWNKI--GHK-RLLRKPASVLSISLDGKYLAMGSKDGDIC 269 (301)
Q Consensus 198 ~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~d~~~~~~~--~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 269 (301)
.....++|+|+++.++ ++... .+.|.+||+...... ..+ .........++++++|++.++ +.+ .|.
T Consensus 188 ~~p~gl~~spdg~~ly----v~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~ 261 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLY----VSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVC 261 (305)
T ss_dssp SSEEEEEECTTSSEEE----EEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEE
T ss_pred CCCcceEEcCCCCEEE----EEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEE
Confidence 2478899999999632 22222 368999998754311 111 112344567899999995444 444 499
Q ss_pred EEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 270 VVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 270 i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
+|+.. ++.+..+. .+ ..+.+++|+||++
T Consensus 262 ~~~~~-g~~~~~~~-~~--~~~~~~~f~~d~~ 289 (305)
T 3dr2_A 262 VFDSD-GQLLGHIP-TP--GTASNCTFDQAQQ 289 (305)
T ss_dssp EECTT-SCEEEEEE-CS--SCCCEEEECTTSC
T ss_pred EECCC-CCEEEEEE-CC--CceeEEEEeCCCC
Confidence 99984 55555442 22 3588999998874
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.51 E-value=1e-11 Score=100.15 Aligned_cols=220 Identities=13% Similarity=0.100 Sum_probs=143.3
Q ss_pred cceEEEECCCCCeEEEEec--CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC
Q 022184 65 DPMTIAVNPSGDDFVCSTT--NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~ 142 (301)
....++|+|||++++++.. ++.|.++|+.+.+....+.. .+ . ...+....+.+++.+.||.+.+.++.
T Consensus 138 ~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v--------~g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 138 YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV--------PD-C-YHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp CGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--------CS-E-EEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC--------CC-c-ceeecCCCceeEEECCCCCEEEEECC
Confidence 5778999999999988864 68899999998876433321 11 1 22333345667777788888888886
Q ss_pred C-cceecccc----cCCccEE-EEEec-CCCcEEEEEeCCCcEEEEeCCCCce--EEEEee---------cCCCCeeEEE
Q 022184 143 S-LRIILDEP----KAHKSVL-DMDFS-LDSEFLATTSTDGSARIWKTEDGVA--WTFLTR---------NSDEKIELCR 204 (301)
Q Consensus 143 ~-~~~~~~~~----~~~~~i~-~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~---------~~~~~v~~~~ 204 (301)
+ ++...... ....++. ...|. ++|++++ .+.+|+|.+.|+.+... ...+.. -.......++
T Consensus 208 ~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a 286 (386)
T 3sjl_D 208 TEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVA 286 (386)
T ss_dssp SSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEE
T ss_pred CCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceee
Confidence 5 44321111 1112222 24564 6776544 55689999999976542 222210 0011244678
Q ss_pred EccCCCcceEEEEEEe-----CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCC-EEEEee-CCCcEEEEeCCCce
Q 022184 205 FSKDGTKPFLFCTVQR-----GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGK-YLAMGS-KDGDICVVDVKKME 277 (301)
Q Consensus 205 ~~~~~~~~~~~~~~~~-----~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~d~~i~i~~~~~~~ 277 (301)
++++++.+|+..--.. .....|.++|+.+++.+..+... ..+..+++++|++ +|++.. .++.|.++|..+++
T Consensus 287 ~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 287 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 8999998554211000 12368999999999988777653 4678999999997 666654 58999999999999
Q ss_pred eeccccccccCccEEEEEEccC
Q 022184 278 INHWSKRLHLGTSIALVEFCPT 299 (301)
Q Consensus 278 ~~~~~~~~~~~~~v~~~~~spd 299 (301)
.+..+.. .+..+.|.+++|
T Consensus 366 ~~~~i~~---~~~p~~l~~s~d 384 (386)
T 3sjl_D 366 ELRSVNQ---LGHGPQVITTAD 384 (386)
T ss_dssp EEEEECC---CCSSCCEEEECC
T ss_pred EEEEecC---CCCCceeEECCc
Confidence 9887743 344567777777
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=9.4e-12 Score=100.37 Aligned_cols=250 Identities=8% Similarity=-0.083 Sum_probs=149.5
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec--
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT-- 83 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-- 83 (301)
.+..++++++ +++++...... ++.++||.++ . ..+...+.......+|...+..++++++++.+++-..
T Consensus 18 ~p~~va~~~~---g~~~v~~~~~~----~~~~~l~~~~-~-g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~ 88 (343)
T 2qe8_A 18 APGNITLTPD---GRLFLSLHQFY----QPEMQVAELT-Q-DGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ 88 (343)
T ss_dssp CEEEEEECTT---SCEEEEECGGG----CCSCSEEEEE-T-TEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH
T ss_pred CcceEEECCC---CCEEEEeCCCC----CCceEEEEEC-C-CCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC
Confidence 4567777765 45555532111 1125777776 3 2333222211223356678999999999876655433
Q ss_pred ---CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEE-EEee---cCCeEEEEeCCCcceecccccC---
Q 022184 84 ---NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGG---VDGHLRIMHWPSLRIILDEPKA--- 153 (301)
Q Consensus 84 ---d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~---~dg~i~v~d~~~~~~~~~~~~~--- 153 (301)
++.|.+||+.+++....+... .....+...+..+++++++..+ ++-. .++.|.+||+.+++....+..|
T Consensus 89 ~~~~~~i~~~d~~tg~~~~~~~~~-~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~ 167 (343)
T 2qe8_A 89 SKSVPKLVAWDTLNNQLSRVIYLP-PPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI 167 (343)
T ss_dssp HTSCCEEEEEETTTTEEEEEEECC-TTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred cCCCCeEEEEECCCCeEEEEEECC-hhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence 578999999877643222111 1111233456899999865555 4444 5789999999877654333211
Q ss_pred --------------------------CccEEEEEecCCCcEEEEEeCCC-cEEEEeCC---CCc--------eEEEEeec
Q 022184 154 --------------------------HKSVLDMDFSLDSEFLATTSTDG-SARIWKTE---DGV--------AWTFLTRN 195 (301)
Q Consensus 154 --------------------------~~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~---~~~--------~~~~~~~~ 195 (301)
...+..++|+|+++.|+.+..++ .+..++.. .+. .+... .+
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~ 246 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SE 246 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EE
T ss_pred cccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-cc
Confidence 01357899999999888877665 44444432 111 01111 12
Q ss_pred CCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeecc-CCCcEEEEEcCCCCEEEEeeCCCcEEEEe
Q 022184 196 SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL-RKPASVLSISLDGKYLAMGSKDGDICVVD 272 (301)
Q Consensus 196 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~~i~i~~ 272 (301)
. .....++++++|.. .++...++.|.+||..+++........ ...+..++|+++++++++.+..+.+.+|+
T Consensus 247 ~-g~pdgia~d~~G~l-----~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 247 K-PICDGISIDKDHNI-----YVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp C-CSCSCEEECTTCCE-----EEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred C-CCCceEEECCCCCE-----EEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 1 24678999999875 456667889999998555543222221 34678999999998888877655554444
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.49 E-value=4.1e-11 Score=95.94 Aligned_cols=226 Identities=10% Similarity=-0.008 Sum_probs=137.6
Q ss_pred EEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcE
Q 022184 8 TCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGC 87 (301)
Q Consensus 8 ~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i 87 (301)
.+.+|+++. ..++.++.. .+ .|+.+++.+..... + .....+.+++|+++|+++++. .++ |
T Consensus 52 egp~~~~~~--~~l~~~d~~------~~--~i~~~d~~~~~~~~-------~-~~~~~v~~i~~~~dg~l~v~~-~~g-l 111 (326)
T 2ghs_A 52 EGPTFDPAS--GTAWWFNIL------ER--ELHELHLASGRKTV-------H-ALPFMGSALAKISDSKQLIAS-DDG-L 111 (326)
T ss_dssp EEEEEETTT--TEEEEEEGG------GT--EEEEEETTTTEEEE-------E-ECSSCEEEEEEEETTEEEEEE-TTE-E
T ss_pred cCCeEeCCC--CEEEEEECC------CC--EEEEEECCCCcEEE-------E-ECCCcceEEEEeCCCeEEEEE-CCC-E
Confidence 456788652 344444332 12 46666665543311 1 123579999999999877654 444 8
Q ss_pred EEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec------CCeEEEEeCCCcceecccccCCccEEEEE
Q 022184 88 KLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV------DGHLRIMHWPSLRIILDEPKAHKSVLDMD 161 (301)
Q Consensus 88 ~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~ 161 (301)
.+||.++++... +.. .........+..++++|+|+++++... .+.|..++ +++.. .+.........++
T Consensus 112 ~~~d~~~g~~~~-~~~--~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~ 185 (326)
T 2ghs_A 112 FLRDTATGVLTL-HAE--LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSIC 185 (326)
T ss_dssp EEEETTTCCEEE-EEC--SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEE
T ss_pred EEEECCCCcEEE-Eee--CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeE
Confidence 999987665321 111 100011245789999999987665432 24566666 44432 2222224567899
Q ss_pred ecCCCcEEEEE-eCCCcEEEEeCC--CC-ce--EEEEee--cCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC
Q 022184 162 FSLDSEFLATT-STDGSARIWKTE--DG-VA--WTFLTR--NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST 233 (301)
Q Consensus 162 ~~~~~~~l~~~-~~d~~i~i~d~~--~~-~~--~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 233 (301)
|+|+++.++.+ +.++.|.+||+. ++ +. ...+.. .....+..+++.++|.. .++...++.|.+||. +
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l-----wva~~~~~~v~~~d~-~ 259 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI-----WNARWGEGAVDRYDT-D 259 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE-----EEEEETTTEEEEECT-T
T ss_pred EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE-----EEEEeCCCEEEEECC-C
Confidence 99999866554 456899999986 55 31 112211 12234678999999974 233334578999998 5
Q ss_pred ceEeeeeeccCCCcEEEEEc-CCCCEEEEeeCC
Q 022184 234 WNKIGHKRLLRKPASVLSIS-LDGKYLAMGSKD 265 (301)
Q Consensus 234 ~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~d 265 (301)
++.+..+......+++++|+ |+++.|++++..
T Consensus 260 g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 260 GNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 66666666666679999998 888777665543
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=1.2e-12 Score=107.32 Aligned_cols=217 Identities=10% Similarity=-0.049 Sum_probs=140.9
Q ss_pred CCCCeEEEEecC-----CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee----------cCCeEE
Q 022184 73 PSGDDFVCSTTN-----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG----------VDGHLR 137 (301)
Q Consensus 73 ~~~~~l~~~~~d-----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~ 137 (301)
+++++++++... +.|.++|..+.+....+... ..+ .+.++||+++++++. .++.|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-------~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vs 152 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-------FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVE 152 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-------SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-------CCC--ceEECCCCCEEEEEeccccccccCCCCCEEE
Confidence 477777666542 68999999888764443321 123 799999999988876 367899
Q ss_pred EEeCCCcceecccccC-------CccEEEEEecCCCcEEEEEeC--CCcEEEEeCCCCceEEEEeecCC------CCeeE
Q 022184 138 IMHWPSLRIILDEPKA-------HKSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTFLTRNSD------EKIEL 202 (301)
Q Consensus 138 v~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~------~~v~~ 202 (301)
++|..+++.+..+.-. ......+.++|||++++.+.. ++.|.+.|+.+++.+..+..... ..-..
T Consensus 153 viD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~ 232 (426)
T 3c75_H 153 VFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVF 232 (426)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEE
T ss_pred EEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEE
Confidence 9999998877665421 123467899999999988874 57899999999988877754210 00111
Q ss_pred EEEccCCCcceEEE--------------------------------EEEeCCcceEEEEEccCceEe--eeeec------
Q 022184 203 CRFSKDGTKPFLFC--------------------------------TVQRGDKALLAVYDISTWNKI--GHKRL------ 242 (301)
Q Consensus 203 ~~~~~~~~~~~~~~--------------------------------~~~~~~~~~i~~~d~~~~~~~--~~~~~------ 242 (301)
+.++++|+..++-. ++.....+.+.+.|+...... ..+..
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 33444444311100 111223456777776543321 11110
Q ss_pred ----cCCCcEEEEEcCCCCEEEEeeC----------CCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 243 ----LRKPASVLSISLDGKYLAMGSK----------DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 243 ----~~~~v~~~~~s~~~~~l~~~~~----------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.......++++|+++.+++... ++.|.++|+.+.+.+..+.. .....+++|+|||+
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v---g~~P~gia~spDg~ 382 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL---GHEIDSINVSQDAE 382 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---EEEECEEEECCSSS
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC---CCCcCeEEEccCCC
Confidence 0112223789999888777642 35799999999999988753 33688999999986
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.48 E-value=7.2e-12 Score=101.07 Aligned_cols=242 Identities=7% Similarity=-0.097 Sum_probs=142.9
Q ss_pred eEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe----------cCCcEEEEEEcCCccccccccccCC
Q 022184 38 EIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLAKKMP 107 (301)
Q Consensus 38 ~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~~w~~~~~~~~~~~~~~~~~ 107 (301)
.+..+|....+... .+..-..+ .+.++||+++++++. .++.|.+||..+.+....+......
T Consensus 47 ~vsvID~~t~~v~~------~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~ 118 (368)
T 1mda_H 47 ENWVSCAGCGVTLG------HSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP 118 (368)
T ss_dssp EEEEEETTTTEEEE------EEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC
T ss_pred eEEEEECCCCeEEE------EEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc
Confidence 45556665554432 22222334 799999999998886 3688999999988775444321000
Q ss_pred CCCCCCCeeEEEEeeCCCEEEEeec--CCeEEE--EeCCCcceecccccCC-------ccEEEEEe--------------
Q 022184 108 PLQDAGPQKCLSFSVDGSRFAAGGV--DGHLRI--MHWPSLRIILDEPKAH-------KSVLDMDF-------------- 162 (301)
Q Consensus 108 ~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~v--~d~~~~~~~~~~~~~~-------~~i~~~~~-------------- 162 (301)
.+........++++|||++++++.. +..+.+ +|..+- ..+.... +.-.-+++
T Consensus 119 ~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv---~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~ 195 (368)
T 1mda_H 119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDD---QLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEE---EEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhc---eEEECCCceEEccCCCeEEEEEcCCCCEEEEECccc
Confidence 0001123567999999999998875 467888 888651 1111000 00000111
Q ss_pred -----------------------cCCCcEEEEEeCCCcEEEEeCCCCc--eEEEEeec------C---CCCeeEEEEccC
Q 022184 163 -----------------------SLDSEFLATTSTDGSARIWKTEDGV--AWTFLTRN------S---DEKIELCRFSKD 208 (301)
Q Consensus 163 -----------------------~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~------~---~~~v~~~~~~~~ 208 (301)
.+++..++..+. +.+.+.|+.... .+..+... . ......++++|+
T Consensus 196 ~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~d 274 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKN 274 (368)
T ss_dssp CCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETT
T ss_pred cccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCC
Confidence 222333333333 566666765432 11111110 0 011223789999
Q ss_pred CCcceEEEEEEe-C-C-----cceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCE-EEEee-CCCcEEEEeCCCceee
Q 022184 209 GTKPFLFCTVQR-G-D-----KALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKY-LAMGS-KDGDICVVDVKKMEIN 279 (301)
Q Consensus 209 ~~~~~~~~~~~~-~-~-----~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~-~d~~i~i~~~~~~~~~ 279 (301)
++++|+ ... . . +..+.++|+.+.+.+..+.... ....++|+|||++ +++.. .++.|.++|+.+++.+
T Consensus 275 g~~lyV---~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 275 TDGIMI---LTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp TTEEEE---EEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred CCEEEE---EeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 998442 222 1 2 2345699999999887776544 5789999999985 55555 4899999999999999
Q ss_pred ccccccccCccEEEEEEcc
Q 022184 280 HWSKRLHLGTSIALVEFCP 298 (301)
Q Consensus 280 ~~~~~~~~~~~v~~~~~sp 298 (301)
..+.. ......+++.+
T Consensus 351 ~~I~v---g~~P~~i~~~~ 366 (368)
T 1mda_H 351 SSVEL---DKGPESLSVQN 366 (368)
T ss_dssp EECCC---CSCCCEEECCC
T ss_pred EEEEC---CCCCCEEEeec
Confidence 88753 33455666654
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.45 E-value=1.3e-14 Score=118.11 Aligned_cols=202 Identities=13% Similarity=0.037 Sum_probs=111.5
Q ss_pred CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccC
Q 022184 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (301)
Q Consensus 74 ~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 153 (301)
++..+++++.|+.|+.||..+++...+... +.+.+..+..++..+++++.|+.|+.||..+++.+.....+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 577899999999999999998887554432 22333334567778888889999999999888875444322
Q ss_pred Cc-cEE-EEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEc
Q 022184 154 HK-SVL-DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI 231 (301)
Q Consensus 154 ~~-~i~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 231 (301)
.. .+. ...+. ++..+++++.|+.++.||.++|+.+..+..+. ...++|++.. ++.++.++.|..||.
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~-----v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSL-----LYLGRTEYTITMYDT 147 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------------EEEEEEEEEEECCCS
T ss_pred CccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCE-----EEEEecCCEEEEEEC
Confidence 11 110 11111 34567788889999999999999877665432 2345666665 566677899999999
Q ss_pred cCceEeeeeeccCCCcEEEEEcCCC---CEEEEeeCCCcEEEEeCCCceeeccccccccCccE-EEEEEccCC
Q 022184 232 STWNKIGHKRLLRKPASVLSISLDG---KYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSI-ALVEFCPTQ 300 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v-~~~~~spdg 300 (301)
++++.+-.+.... .....++++. ..+++++.||.|+.||..+++.+.... . ..++ ....+++||
T Consensus 148 ~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~--~-~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 148 KTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN--Y-ASPVVAFYVWQREG 215 (369)
T ss_dssp SSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE--C-SSCEEEEEECTTSS
T ss_pred CCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec--C-CCceEEEEEecCCc
Confidence 9988654443221 1223334432 567788899999999999998776543 2 3344 344555555
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.38 E-value=5.6e-10 Score=90.88 Aligned_cols=190 Identities=14% Similarity=0.119 Sum_probs=126.3
Q ss_pred cceEEEECCCCCeEEEEecC------CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-------
Q 022184 65 DPMTIAVNPSGDDFVCSTTN------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG------- 131 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------- 131 (301)
....+...|+| .++++..+ +.|.++|.++.+...+..... ....--..+.|+|+++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~----~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~ 213 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDR----GDQYLAYDFWWNLPNEVLVSSEWAVPNTI 213 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBC----TTCCCCCCEEEETTTTEEEECBCCCHHHH
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCC----CCccccceEEECCCCCEEEEccCcCcccc
Confidence 46678889999 66666555 689999998877644332111 0112235688999999888874
Q ss_pred ------------cCCeEEEEeCCCcceecccccC-C-ccEEEEEe--cCCCcEEEEEe------CCCcEEEEeCCCCceE
Q 022184 132 ------------VDGHLRIMHWPSLRIILDEPKA-H-KSVLDMDF--SLDSEFLATTS------TDGSARIWKTEDGVAW 189 (301)
Q Consensus 132 ------------~dg~i~v~d~~~~~~~~~~~~~-~-~~i~~~~~--~~~~~~l~~~~------~d~~i~i~d~~~~~~~ 189 (301)
.+.+|.+||+.+++.+.++... . .....+.| +|++++++.+. .+++|.+|....++..
T Consensus 214 ~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~ 293 (462)
T 2ece_A 214 EDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWN 293 (462)
T ss_dssp TTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEE
T ss_pred ccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCcee
Confidence 3689999999988766665543 1 24455655 99999877666 4568887766554321
Q ss_pred --EEEeecC-----------------CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC---ceEeeeeeccC---
Q 022184 190 --TFLTRNS-----------------DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST---WNKIGHKRLLR--- 244 (301)
Q Consensus 190 --~~~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~--- 244 (301)
..+.... ...+..+.+++||+++| ++....+.|.+||+.. .+.+..+....
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY----VSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~ 369 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY----LSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFH 369 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE----EEETTTTEEEEEECSSTTSCEEEEEEECBTTTT
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE----EEeCCCCEEEEEEecCCCCcEEEEEEEeCCeec
Confidence 1110000 13468899999999753 4455568999999852 34444443321
Q ss_pred -----------CCcEEEEEcCCCCEEEEee
Q 022184 245 -----------KPASVLSISLDGKYLAMGS 263 (301)
Q Consensus 245 -----------~~v~~~~~s~~~~~l~~~~ 263 (301)
.....++++|||++|+++.
T Consensus 370 ~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 370 RADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1368899999999999998
No 227
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.38 E-value=1e-09 Score=85.18 Aligned_cols=221 Identities=8% Similarity=-0.045 Sum_probs=141.2
Q ss_pred CcceEEEECCCCCeEEEEe-cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeC
Q 022184 64 GDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHW 141 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~ 141 (301)
..+..++|++++..|+.+. .++.|..++..+.... .... ........++++|++..|+.+ ...+.|.++++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~------~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-TIIR------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-EEEC------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-EEEE------CCCCCccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 4578999999777666554 4678999998765431 1110 112467899999976666555 45678999998
Q ss_pred CCcceecccccCCccEEEEEecCCCcEEEEEeC---CCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEE
Q 022184 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATTST---DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (301)
+.................++++|++..|+.+.. .+.|..+++.... ...+..........++++|++..+| +
T Consensus 109 ~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~ly----v 183 (267)
T 1npe_A 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLC----W 183 (267)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEE----E
T ss_pred CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEE----E
Confidence 643322112222246789999997665554443 3678888876433 2333222223578999999887643 4
Q ss_pred EeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCceeeccccccccCccEEEEEEc
Q 022184 219 QRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFC 297 (301)
Q Consensus 219 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~s 297 (301)
+....+.|.++|............ ......++.. +..|+.+. ..+.|..+|..+++.+..+..+. ......+++.
T Consensus 184 ~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~-~~~p~gi~~~ 259 (267)
T 1npe_A 184 VDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK-QTRLYGITIA 259 (267)
T ss_dssp EETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSS-CCCCCCEEEE
T ss_pred EECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccc-ccccceeeec
Confidence 556678999999976543333332 2344566654 44555554 56899999999998887764332 2347788999
Q ss_pred cCC
Q 022184 298 PTQ 300 (301)
Q Consensus 298 pdg 300 (301)
||+
T Consensus 260 ~~~ 262 (267)
T 1npe_A 260 LSQ 262 (267)
T ss_dssp CSC
T ss_pred Ccc
Confidence 886
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.37 E-value=1.8e-10 Score=101.22 Aligned_cols=216 Identities=10% Similarity=0.081 Sum_probs=138.0
Q ss_pred CCcEEEEEEcCCccccccccccCCCC------------------------CCCCCeeEEEEeeCCCEEEEeecCCe----
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPL------------------------QDAGPQKCLSFSVDGSRFAAGGVDGH---- 135 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~------------------------~~~~~v~~~~~s~~~~~l~~~~~dg~---- 135 (301)
++.|+.||.++++...+......... .+......++++|+..+++++..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 68899999988887554432100000 01111235788998889998887763
Q ss_pred ---------------EEEEeCCCcceecccccCC---------ccEEEEEecCCCc---EEEEEeCCCcEEEEeCCCCce
Q 022184 136 ---------------LRIMHWPSLRIILDEPKAH---------KSVLDMDFSLDSE---FLATTSTDGSARIWKTEDGVA 188 (301)
Q Consensus 136 ---------------i~v~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~ 188 (301)
|..+|.++|+.+..+.... .++.......+|+ .++.++.+|.++++|.++|+.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 9999999999876654321 1222222333565 788999999999999999998
Q ss_pred EEEEeecCCC--------------------------------------CeeEEEEccCCCcceEEEEE------------
Q 022184 189 WTFLTRNSDE--------------------------------------KIELCRFSKDGTKPFLFCTV------------ 218 (301)
Q Consensus 189 ~~~~~~~~~~--------------------------------------~v~~~~~~~~~~~~~~~~~~------------ 218 (301)
+......... .-..++|+|+...+|+...-
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 7544321100 01126788887753321100
Q ss_pred ----------Ee------------------CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEE
Q 022184 219 ----------QR------------------GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICV 270 (301)
Q Consensus 219 ----------~~------------------~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i 270 (301)
.+ ..++.|..||+.+++.+-....+. +...-.+...+.++++++.||.|+.
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a 500 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIA 500 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEE
Confidence 00 014889999999999876665443 2333356667889999999999999
Q ss_pred EeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 271 VDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
||.++++++..+...+ .....-+.|..||+
T Consensus 501 ~D~~tG~~lw~~~~~~-~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 501 YAADTGEKLWEQPAAS-GVMAAPVTYSVDGE 530 (689)
T ss_dssp EETTTCCEEEEEECSS-CCCSCCEEEEETTE
T ss_pred EECCCCccceeeeCCC-CcccCceEEEECCE
Confidence 9999999987764433 32233455666664
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.33 E-value=1.2e-11 Score=103.89 Aligned_cols=195 Identities=9% Similarity=0.062 Sum_probs=138.2
Q ss_pred eEEEECC-----CCCeEEEEec-CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEE-e-eCCCEEEEee-------
Q 022184 67 MTIAVNP-----SGDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF-S-VDGSRFAAGG------- 131 (301)
Q Consensus 67 ~~~~~~~-----~~~~l~~~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s-~~~~~l~~~~------- 131 (301)
.....|. ||+++..... +++|.+.|+++.+....+. +.....+..+++ + |+++++++++
T Consensus 88 hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~------ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~ 161 (595)
T 1fwx_A 88 HHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILE------IPNAKGIHGLRPQKWPRSNYVFCNGEDETPLV 161 (595)
T ss_dssp CCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEE------CSSCCSEEEEEECCSSBCSEEEEEECSCEESS
T ss_pred CccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEe------CCCCCCCcceeeeecCCCcEEEEecccccccC
Confidence 3355555 7888877655 4679999999887533221 112245678887 5 8999988884
Q ss_pred -----------cCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCC------------------------
Q 022184 132 -----------VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG------------------------ 176 (301)
Q Consensus 132 -----------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~------------------------ 176 (301)
.++.+.+.|..+.+...++.-.. ....++++|+|+++++.+.+.
T Consensus 162 ~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~ 240 (595)
T 1fwx_A 162 NDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE 240 (595)
T ss_dssp CSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH
T ss_pred CCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccc
Confidence 34689999999888777765433 456788999999988887543
Q ss_pred --------------cEEEEeCCC--Cce-EEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce----
Q 022184 177 --------------SARIWKTED--GVA-WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN---- 235 (301)
Q Consensus 177 --------------~i~i~d~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---- 235 (301)
.|.+.|.++ ++. +..+.... ...++.++|||+++ ++++..+.+|.++|+.+.+
T Consensus 241 ~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~--~PhGv~~sPDGk~v----~V~~~~s~~VsVid~~~~~~~~~ 314 (595)
T 1fwx_A 241 IEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN--NPHGCNMAPDKKHL----CVAGKLSPTVTVLDVTRFDAVFY 314 (595)
T ss_dssp HHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES--SCCCEEECTTSSEE----EEECTTSSBEEEEEGGGHHHHHH
T ss_pred eeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCC--CceEEEEcCCCCEE----EEeCCCCCeEEEEECcccccccc
Confidence 477888877 444 55555432 36789999999974 4677788999999998653
Q ss_pred --------EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 236 --------KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 236 --------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
...... .......++|+|+|....+.-.|+.|.+||+.+
T Consensus 315 ~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 315 ENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp SCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 222222 235678899999994444556789999999977
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.32 E-value=5.5e-10 Score=85.42 Aligned_cols=196 Identities=8% Similarity=-0.022 Sum_probs=133.2
Q ss_pred cceEEEECCCCCeEEEEec--CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeC
Q 022184 65 DPMTIAVNPSGDDFVCSTT--NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHW 141 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~ 141 (301)
....+.|++++..+++.+. ++.|+++|+.+++........ .......+++ +++.|+.+ ..++.+.++|.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~------~~~fgeGi~~--~g~~lyv~t~~~~~v~viD~ 93 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD------DSYFGEGLTL--LNEKLYQVVWLKNIGFIYDR 93 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC------TTCCEEEEEE--ETTEEEEEETTCSEEEEEET
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC------CCcceEEEEE--eCCEEEEEEecCCEEEEEEC
Confidence 3579999998754444443 578999999988764443211 1111223444 45555544 45789999999
Q ss_pred CCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCC----CCeeEEEEccCCCcceEEEE
Q 022184 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD----EKIELCRFSKDGTKPFLFCT 217 (301)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~ 217 (301)
.+.+.+.++...... ...+++|++.++++..+++|.++|..+.+.+..+..... ..++.+.|. ++.. .
T Consensus 94 ~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l-----y 165 (266)
T 2iwa_A 94 RTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV-----W 165 (266)
T ss_dssp TTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE-----E
T ss_pred CCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE-----E
Confidence 998887776533111 234566888777777788999999999988888764321 135678888 6642 2
Q ss_pred EEeCCcceEEEEEccCceEeeeeecc-------------CCCcEEEEEcCCCCEEEE-eeCCCcEEEEeCCCc
Q 022184 218 VQRGDKALLAVYDISTWNKIGHKRLL-------------RKPASVLSISLDGKYLAM-GSKDGDICVVDVKKM 276 (301)
Q Consensus 218 ~~~~~~~~i~~~d~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~-~~~d~~i~i~~~~~~ 276 (301)
+....++.|.+.|..+++.+..+... ......++|+|+++.+++ +...+++...++...
T Consensus 166 vn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 166 ANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 44556789999999999987776532 135689999999865554 556788888887654
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.29 E-value=1.1e-09 Score=83.78 Aligned_cols=178 Identities=10% Similarity=0.048 Sum_probs=122.7
Q ss_pred CeeEEEEeeCCCEEEEeec--CCeEEEEeCCCcceecccccCCc-cEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEE
Q 022184 114 PQKCLSFSVDGSRFAAGGV--DGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT 190 (301)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 190 (301)
....+.|+|++.++++.+. ++.|+++|+.+++.+..+.-... ....+++.. ++..++.-.++.+.++|..+.+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEE
Confidence 3578999998754444432 58999999999998776543222 233555552 2344445578899999999999998
Q ss_pred EEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC-----CCcEEEEEcCCCCEEEEeeCC
Q 022184 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMGSKD 265 (301)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~d 265 (301)
.+..... ....+++||+.+ +.+..++.|.++|..+.+.+..+.... ..++.+.|. +|+..+....+
T Consensus 101 ~i~~g~~---~g~glt~Dg~~l-----~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 101 NFTHQMK---DGWGLATDGKIL-----YGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp EEECCSS---SCCEEEECSSSE-----EEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EEECCCC---CeEEEEECCCEE-----EEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCC
Confidence 8865411 234467788873 334457899999999988776665432 246788888 77555555567
Q ss_pred CcEEEEeCCCceeeccccccc-----------cCccEEEEEEccCCC
Q 022184 266 GDICVVDVKKMEINHWSKRLH-----------LGTSIALVEFCPTQR 301 (301)
Q Consensus 266 ~~i~i~~~~~~~~~~~~~~~~-----------~~~~v~~~~~spdg~ 301 (301)
+.|.+.|..+++.+..+.... .....+.++|+|+|+
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~ 218 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK 218 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC
Confidence 899999999998877764210 013568999999974
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.27 E-value=6.3e-10 Score=97.54 Aligned_cols=215 Identities=10% Similarity=0.069 Sum_probs=139.8
Q ss_pred CCcEEEEEEcCCccccccccccCCC---------------C----------CCCCCeeEEEEeeCCCEEEEeecCC----
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPP---------------L----------QDAGPQKCLSFSVDGSRFAAGGVDG---- 134 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~---------------~----------~~~~~v~~~~~s~~~~~l~~~~~dg---- 134 (301)
++.|+.+|.++++...+........ . .+......++++|++..++.+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 6889999998888755443211110 0 1111224578899888888887654
Q ss_pred ---------------eEEEEeCCCcceecccccCC---------ccEEEEEecCCC---cEEEEEeCCCcEEEEeCCCCc
Q 022184 135 ---------------HLRIMHWPSLRIILDEPKAH---------KSVLDMDFSLDS---EFLATTSTDGSARIWKTEDGV 187 (301)
Q Consensus 135 ---------------~i~v~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~ 187 (301)
.|..+|.++++.+..+.... ....-+....+| ..++.++.+|.++++|.++++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 59999999998876544311 112223334477 678999999999999999999
Q ss_pred eEEEEeecCCC----------Ce------------------------eEEEEccCCCcceEEEEEE------------e-
Q 022184 188 AWTFLTRNSDE----------KI------------------------ELCRFSKDGTKPFLFCTVQ------------R- 220 (301)
Q Consensus 188 ~~~~~~~~~~~----------~v------------------------~~~~~~~~~~~~~~~~~~~------------~- 220 (301)
.+..+...... ++ ..++++|++..+|+...-. +
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 88766532110 01 1468888887643311100 0
Q ss_pred -------------------------CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 221 -------------------------GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 221 -------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
...+.|..||+.+++.+-.... ..++....+..++.++++++.||.+++||..+
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 0137899999999998765543 33444555677788899999999999999999
Q ss_pred ceeeccccccccCccEEEEEEccCC
Q 022184 276 MEINHWSKRLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 276 ~~~~~~~~~~~~~~~v~~~~~spdg 300 (301)
++.+..+...+ .....-+.|.++|
T Consensus 508 G~~lw~~~~~~-~~~~~p~~y~~~G 531 (677)
T 1kb0_A 508 GEKLWEAPTGT-GVVAAPSTYMVDG 531 (677)
T ss_dssp CCEEEEEECSS-CCCSCCEEEEETT
T ss_pred CceeeeeeCCC-CcccCCEEEEeCC
Confidence 99988775433 3223334445555
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.22 E-value=5.5e-10 Score=90.12 Aligned_cols=200 Identities=10% Similarity=-0.148 Sum_probs=122.5
Q ss_pred cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee----------cCCeEEEEeCCCcceecccccC--
Q 022184 86 GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG----------VDGHLRIMHWPSLRIILDEPKA-- 153 (301)
Q Consensus 86 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~v~d~~~~~~~~~~~~~-- 153 (301)
+|.++|..+.+....+... ..+ .+.++||+++++++. .++.|.+||+.+++.+..+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG-------~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGA-------FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETTTTEEEEEEEEC-------TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred eEEEEECCCCeEEEEEeCC-------CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence 7889999888764443321 223 799999999998886 3688999999999988776432
Q ss_pred -----CccEEEEEecCCCcEEEEEeC--CCcEEE--EeCCCCceEEEEeecCCC------CeeEEEEccCCCcceEEE--
Q 022184 154 -----HKSVLDMDFSLDSEFLATTST--DGSARI--WKTEDGVAWTFLTRNSDE------KIELCRFSKDGTKPFLFC-- 216 (301)
Q Consensus 154 -----~~~i~~~~~~~~~~~l~~~~~--d~~i~i--~d~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~~-- 216 (301)
......++++|||++++++.. +..+.+ +|+.+ +..+...... .-.-++++++++...+-.
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 123567999999999988874 457888 99876 3333211000 000012222222100000
Q ss_pred ------------------------------EEEeCCcceEEEEEccCce--Eeeeeecc----------CCCcEEEEEcC
Q 022184 217 ------------------------------TVQRGDKALLAVYDISTWN--KIGHKRLL----------RKPASVLSISL 254 (301)
Q Consensus 217 ------------------------------~~~~~~~~~i~~~d~~~~~--~~~~~~~~----------~~~v~~~~~s~ 254 (301)
++..+. +.+.+.|..+.. .+..+... ......++++|
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~ 273 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK 273 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET
T ss_pred ccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcC
Confidence 111112 556666664321 12111110 01122278999
Q ss_pred CCCEEEEeeC---------CCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 255 DGKYLAMGSK---------DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 255 ~~~~l~~~~~---------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
|++.++++.. ++.+.++|+.+.+.+..+..+ .....++|+|||+
T Consensus 274 dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~ 326 (368)
T 1mda_H 274 NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGA 326 (368)
T ss_dssp TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---EEECEEEECCSSS
T ss_pred CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC---CCcceEEECCCCC
Confidence 9998887643 235779999999988887532 3688999999985
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.22 E-value=2.6e-09 Score=80.79 Aligned_cols=181 Identities=12% Similarity=0.026 Sum_probs=124.8
Q ss_pred ceEEEECCCCCeEEEEecCC--cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-cCCeEEEEeCC
Q 022184 66 PMTIAVNPSGDDFVCSTTNG--GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWP 142 (301)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~--~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~d~~ 142 (301)
...+.|+ ++.++.+.+.+| .|+.+|+++++....... ..........++++.|.... .++.+.++|..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--------~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--------GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--------CTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--------CCccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 4789998 666666777765 899999998876444321 12333333444555665544 58999999999
Q ss_pred CcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecC-C---CCeeEEEEccCCCcceEEEEE
Q 022184 143 SLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS-D---EKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~~~~~~~~~ 218 (301)
+.+.+.++.... ....+++|++.|+.+..++.|.++|..+.+.+..+.... + ..++.+.|. +|+. .+
T Consensus 116 t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~l-----ya 186 (262)
T 3nol_A 116 NLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEI-----FA 186 (262)
T ss_dssp TCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEE-----EE
T ss_pred cCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEE-----EE
Confidence 999887775433 223344577877777767889999999999888876432 1 224557776 6642 24
Q ss_pred EeCCcceEEEEEccCceEeeeeecc------------CCCcEEEEEcCCCCEEEEeeC
Q 022184 219 QRGDKALLAVYDISTWNKIGHKRLL------------RKPASVLSISLDGKYLAMGSK 264 (301)
Q Consensus 219 ~~~~~~~i~~~d~~~~~~~~~~~~~------------~~~v~~~~~s~~~~~l~~~~~ 264 (301)
..-.+..|.+.|.++++.+..+... ..-.+.++|+|+++.|++.+.
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 4556789999999999987666542 134688999999877777765
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.21 E-value=4.5e-09 Score=79.52 Aligned_cols=175 Identities=10% Similarity=0.109 Sum_probs=120.5
Q ss_pred eeEEEEeeCCCEEEEeecCC--eEEEEeCCCcceecccccCCccEEEEEecCCCcEEEE-EeCCCcEEEEeCCCCceEEE
Q 022184 115 QKCLSFSVDGSRFAAGGVDG--HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLAT-TSTDGSARIWKTEDGVAWTF 191 (301)
Q Consensus 115 v~~~~~s~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~ 191 (301)
...+.|+ ++.++.+.+.+| .|+++|+++++.+.+..-. .........++++.|.. .-.++.+.+||.++.+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4788998 676666666655 8999999999987766433 23333223333444444 44688999999999999999
Q ss_pred EeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC-----CCcEEEEEcCCCCEEEEeeCCC
Q 022184 192 LTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMGSKDG 266 (301)
Q Consensus 192 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~d~ 266 (301)
+..... ...++++++. ++.+..++.|.++|..+.+.+..+.... ..++.+.|. +|+..+..-.++
T Consensus 123 i~~~~e----G~glt~dg~~-----L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~ 192 (262)
T 3nol_A 123 FNYDGE----GWGLTHNDQY-----LIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTN 192 (262)
T ss_dssp EECSSC----CCCEEECSSC-----EEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EECCCC----ceEEecCCCE-----EEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCC
Confidence 875432 2344467776 3444457889999999988877665432 335567886 776555555678
Q ss_pred cEEEEeCCCceeecccccc----------ccCccEEEEEEccCCC
Q 022184 267 DICVVDVKKMEINHWSKRL----------HLGTSIALVEFCPTQR 301 (301)
Q Consensus 267 ~i~i~~~~~~~~~~~~~~~----------~~~~~v~~~~~spdg~ 301 (301)
.|.+.|.++++.+..+... ......+.+||+|+++
T Consensus 193 ~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~ 237 (262)
T 3nol_A 193 KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH 237 (262)
T ss_dssp EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT
T ss_pred eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCC
Confidence 9999999999987765321 0023568999999864
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.18 E-value=1.2e-08 Score=77.16 Aligned_cols=174 Identities=14% Similarity=0.080 Sum_probs=120.5
Q ss_pred CeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccE--EEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEE
Q 022184 114 PQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSV--LDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTF 191 (301)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 191 (301)
-...+.|+ ++.++.+.+.+|.|+++|+++++.+..+ - .... ..+++.. ++..+..-.++.+.+||.++.+.+.+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 34688887 4556667777889999999999987766 2 2233 3355542 23444445789999999999999999
Q ss_pred EeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC-----CCcEEEEEcCCCCEEEEeeCCC
Q 022184 192 LTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMGSKDG 266 (301)
Q Consensus 192 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~d~ 266 (301)
+..... -..+ +++++. ++.+..++.|.++|..+.+.+..+.... ..++.+.|. +|+..+..-.++
T Consensus 132 i~~~~e--GwGL--t~Dg~~-----L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~ 201 (268)
T 3nok_A 132 TRYSGE--GWGL--CYWNGK-----LVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSS 201 (268)
T ss_dssp EECSSC--CCCE--EEETTE-----EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred EeCCCc--eeEE--ecCCCE-----EEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCC
Confidence 875432 2333 467776 3444458899999999988877665432 245677877 776555555678
Q ss_pred cEEEEeCCCceeecccccc-----------ccCccEEEEEEccCCC
Q 022184 267 DICVVDVKKMEINHWSKRL-----------HLGTSIALVEFCPTQR 301 (301)
Q Consensus 267 ~i~i~~~~~~~~~~~~~~~-----------~~~~~v~~~~~spdg~ 301 (301)
.|.+.|.++++.+..+... ......+.+||+|+++
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~ 247 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG 247 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC
Confidence 9999999999887665321 0124678999999864
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.15 E-value=4.2e-10 Score=94.69 Aligned_cols=198 Identities=9% Similarity=0.013 Sum_probs=130.4
Q ss_pred CcceEEEE-C-CCCCeEEEEe------------------cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC
Q 022184 64 GDPMTIAV-N-PSGDDFVCST------------------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD 123 (301)
Q Consensus 64 ~~v~~~~~-~-~~~~~l~~~~------------------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 123 (301)
..+..+++ + |+++++++++ .++.+.+.|.++.+...++... +....++++|+
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg--------g~pd~~~~spd 205 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS--------GNLDNCDADYE 205 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES--------SCCCCEEECSS
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeC--------CCccceEECCC
Confidence 35778887 5 8999998884 2357888888876553333211 12355788999
Q ss_pred CCEEEEeecCC--------------------------------------eEEEEeCCC--cce-ecccccCCccEEEEEe
Q 022184 124 GSRFAAGGVDG--------------------------------------HLRIMHWPS--LRI-ILDEPKAHKSVLDMDF 162 (301)
Q Consensus 124 ~~~l~~~~~dg--------------------------------------~i~v~d~~~--~~~-~~~~~~~~~~i~~~~~ 162 (301)
|+++++.+.+. .|.|.|..+ ++. +..+.. .....++.+
T Consensus 206 Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~ 284 (595)
T 1fwx_A 206 GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNM 284 (595)
T ss_dssp SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEE
T ss_pred CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEE
Confidence 99988877543 355666655 322 222222 234568999
Q ss_pred cCCCcEEEEEe-CCCcEEEEeCCCCc------------eEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEE
Q 022184 163 SLDSEFLATTS-TDGSARIWKTEDGV------------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVY 229 (301)
Q Consensus 163 ~~~~~~l~~~~-~d~~i~i~d~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (301)
+|||+++++++ .+.+|.++|+.+.+ ...... .+.....++|+|+| +. .++..-+++|.+|
T Consensus 285 sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG~gP~h~aF~~dG-~a----Y~t~~ldsqV~kw 357 (595)
T 1fwx_A 285 APDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LGLGPLHTAFDGRG-NA----YTSLFLDSQVVKW 357 (595)
T ss_dssp CTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CCSCEEEEEECTTS-EE----EEEETTTTEEEEE
T ss_pred cCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--CCCCcceEEECCCC-eE----EEEEecCCcEEEE
Confidence 99999877665 67899999998653 233333 33458899999999 53 3556778999999
Q ss_pred EccC----------ceEeeeeeccCCCc-----EEEEEcCCCCEEEEeeC---CCc----------EEEEeCCCce
Q 022184 230 DIST----------WNKIGHKRLLRKPA-----SVLSISLDGKYLAMGSK---DGD----------ICVVDVKKME 277 (301)
Q Consensus 230 d~~~----------~~~~~~~~~~~~~v-----~~~~~s~~~~~l~~~~~---d~~----------i~i~~~~~~~ 277 (301)
|+.+ .+.+..+..+..+- ..+.++|||++|++... |+. -.++|+..++
T Consensus 358 di~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 358 NIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred EhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 9987 44555555543321 12345899999999853 332 2889996544
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.12 E-value=5.5e-08 Score=72.95 Aligned_cols=177 Identities=11% Similarity=0.100 Sum_probs=119.7
Q ss_pred CCeeEEEEeeCCCEEEEeecC--CeEEEEeCCCcceecccccCCcc-EEEEEecCCCcEEEEEeCCCcEEEEeCCCCceE
Q 022184 113 GPQKCLSFSVDGSRFAAGGVD--GHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTDGSARIWKTEDGVAW 189 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 189 (301)
.-...+.|++ +.++.+.+.+ ..|+.+|+.+++.+....-.... -..++.. .++.....-.++.+.+||.++.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 4467899986 5555555554 48999999999987766433221 1234443 2344444557899999999999999
Q ss_pred EEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC-----CCcEEEEEcCCCCEEEEeeC
Q 022184 190 TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMGSK 264 (301)
Q Consensus 190 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~ 264 (301)
.++..... -.. +.+++.. ++.+..++.|.++|..+.+.+..+.... ..++.+.|. +|+..+..-.
T Consensus 99 ~ti~~~~~--Gwg--lt~dg~~-----L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 99 ARFRYPGE--GWA--LTSDDSH-----LYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp EEEECSSC--CCE--EEECSSC-----EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred EEEeCCCC--ceE--EeeCCCE-----EEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 99875432 233 4467776 3444458899999999988877665432 345667776 6665555546
Q ss_pred CCcEEEEeCCCceeecccccc-----------ccCccEEEEEEccCCC
Q 022184 265 DGDICVVDVKKMEINHWSKRL-----------HLGTSIALVEFCPTQR 301 (301)
Q Consensus 265 d~~i~i~~~~~~~~~~~~~~~-----------~~~~~v~~~~~spdg~ 301 (301)
+..|.+.|..+++.+..+... ......+.+|++|+++
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 789999999999887765311 1124678999999764
No 239
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.08 E-value=1e-07 Score=75.36 Aligned_cols=219 Identities=11% Similarity=0.004 Sum_probs=132.5
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC--CeEEEEeC
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD--GHLRIMHW 141 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~v~d~ 141 (301)
.....++|+++++.+++-..++.|..||.++... ... .....+..++++++|+++++.... ..|..+|.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~--~~~-------~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ--IHA-------TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE--EEE-------ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE--EEE-------eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcC
Confidence 4578899999998666655778888888654321 111 112457899999999865554332 24667777
Q ss_pred CCcceecccc-cCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCce-EEEEee--------cCCCCeeEEEEccCCCc
Q 022184 142 PSLRIILDEP-KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA-WTFLTR--------NSDEKIELCRFSKDGTK 211 (301)
Q Consensus 142 ~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~--------~~~~~v~~~~~~~~~~~ 211 (301)
.+++...... ........++..+++..+++-..++.|..+|...++. +..... ..-.....+ +|+++.
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNF 180 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCE
Confidence 7766432111 1112334555555555555555678899999876432 211110 011124455 888876
Q ss_pred ceEEEEEEeCCcceEEEEEccC-ceE--eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeec--cccccc
Q 022184 212 PFLFCTVQRGDKALLAVYDIST-WNK--IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH--WSKRLH 286 (301)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~d~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~--~~~~~~ 286 (301)
+ .++....+.|..||+.. ++. ...+.. ......++++++|+++++....+.|.+++.. ++... .+. ..
T Consensus 181 l----yv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~-~~ 253 (306)
T 2p4o_A 181 L----YVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE-QG 253 (306)
T ss_dssp E----EEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG-GT
T ss_pred E----EEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc-cc
Confidence 3 35556678999999874 321 111111 1345778999999887777777899999976 54422 221 12
Q ss_pred cCccEEEEEEc---cCCC
Q 022184 287 LGTSIALVEFC---PTQR 301 (301)
Q Consensus 287 ~~~~v~~~~~s---pdg~ 301 (301)
....++++|. ||++
T Consensus 254 -~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 254 -VIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp -CTTEEEEEECCSTTTTT
T ss_pred -cCCceEEEEecccCCCC
Confidence 3568899998 7763
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.07 E-value=8.7e-08 Score=84.09 Aligned_cols=203 Identities=13% Similarity=0.111 Sum_probs=134.8
Q ss_pred ceEEEECCCCCeEEEEecCC-------------------cEEEEEEcCCccccccccccCC--CCCCCCCeeEEEEeeCC
Q 022184 66 PMTIAVNPSGDDFVCSTTNG-------------------GCKLFEVYGGATDINLLAKKMP--PLQDAGPQKCLSFSVDG 124 (301)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~-------------------~i~~w~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~ 124 (301)
...++++|++..++.+..++ .|..+|.++++........... ..........+....+|
T Consensus 245 w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 245 WDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp CSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred ccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 34688899888888876653 4888888888775554322110 01111223334444577
Q ss_pred ---CEEEEeecCCeEEEEeCCCcceecccccCC-----------ccE------------------------EEEEecCCC
Q 022184 125 ---SRFAAGGVDGHLRIMHWPSLRIILDEPKAH-----------KSV------------------------LDMDFSLDS 166 (301)
Q Consensus 125 ---~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----------~~i------------------------~~~~~~~~~ 166 (301)
..++.++.+|.++++|..+++.+....... .++ ..++++|+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 678999999999999999998765443111 011 146888988
Q ss_pred cEEEEEeC-------------------------------------------CCcEEEEeCCCCceEEEEeecCCCCeeEE
Q 022184 167 EFLATTST-------------------------------------------DGSARIWKTEDGVAWTFLTRNSDEKIELC 203 (301)
Q Consensus 167 ~~l~~~~~-------------------------------------------d~~i~i~d~~~~~~~~~~~~~~~~~v~~~ 203 (301)
.++++... .+.|..||+.+++.+-.+.... ++...
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~--~~~~g 482 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS--PWNGG 482 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS--SCCCC
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC--CCcCc
Confidence 87776543 1779999999999887776432 34455
Q ss_pred EEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC-CCcEEEEEcCCCCE-EEEeeC----------------C
Q 022184 204 RFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-KPASVLSISLDGKY-LAMGSK----------------D 265 (301)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~-l~~~~~----------------d 265 (301)
.+..++.. ++.++.++.+++||.++++.+..+.... ....-+.|.++|+. +++.+. .
T Consensus 483 ~~~~~g~~-----v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~ 557 (677)
T 1kb0_A 483 TLTTAGNV-----VFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGP 557 (677)
T ss_dssp EEEETTTE-----EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCC
T ss_pred ceEeCCCE-----EEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCC
Confidence 56677775 4567889999999999999987776543 23344667788864 444222 3
Q ss_pred CcEEEEeCCC
Q 022184 266 GDICVVDVKK 275 (301)
Q Consensus 266 ~~i~i~~~~~ 275 (301)
+.+..|.+..
T Consensus 558 ~~l~~f~l~~ 567 (677)
T 1kb0_A 558 GTVYTFVVGG 567 (677)
T ss_dssp CEEEEEEETC
T ss_pred CeEEEEeccc
Confidence 5777887763
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.07 E-value=9.9e-12 Score=101.17 Aligned_cols=147 Identities=18% Similarity=0.121 Sum_probs=82.4
Q ss_pred CCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCee-
Q 022184 123 DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIE- 201 (301)
Q Consensus 123 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~- 201 (301)
++..+++++.|+.|+.||..+|+.+.++.. +++.+..+.+++..+++++.|+.|+.||.++++.+..+..+....+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999998776654 44545455567778888889999999999988876555322111110
Q ss_pred EEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecc
Q 022184 202 LCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHW 281 (301)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~ 281 (301)
...+..++ . ++.++.++.|..||.++++.+..+..+. ...++|++..+++++.|+.|+.||.++++.+..
T Consensus 86 sp~~~~~~-~-----v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 86 SPCRSSDG-I-----LYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp CSCC-----------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred CceEecCC-E-----EEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 01111233 3 3556778999999999998876554432 235567888999999999999999999876544
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.06 E-value=8.1e-08 Score=76.56 Aligned_cols=211 Identities=11% Similarity=0.006 Sum_probs=128.5
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCC------------CCCCCCCeeEEEEee-CCCEEEE
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMP------------PLQDAGPQKCLSFSV-DGSRFAA 129 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~------------~~~~~~~v~~~~~s~-~~~~l~~ 129 (301)
-....+++|+++++.+.++..++.|..|+..++............ .......+..+++.+ +++ |++
T Consensus 18 ~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 18 SYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred cCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 345778999999987888888888999987654331100000000 000113578899998 554 555
Q ss_pred eecCCeEEEEeCCCcceec--cccc--CCccEEEEEecC-CCcEEEEEeC-----------------CCcEEEEeCCCCc
Q 022184 130 GGVDGHLRIMHWPSLRIIL--DEPK--AHKSVLDMDFSL-DSEFLATTST-----------------DGSARIWKTEDGV 187 (301)
Q Consensus 130 ~~~dg~i~v~d~~~~~~~~--~~~~--~~~~i~~~~~~~-~~~~l~~~~~-----------------d~~i~i~d~~~~~ 187 (301)
+...+.|..+|..+++... .... .......+++.| +|+..++-.. ++.|..+|..+++
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 5545558888877554211 1111 112468899999 9987666432 3678888887666
Q ss_pred eEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce--EeeeeeccCCCcEEEEEcCCCCEEEEeeC-
Q 022184 188 AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN--KIGHKRLLRKPASVLSISLDGKYLAMGSK- 264 (301)
Q Consensus 188 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 264 (301)
........ .....++++|+++.++ ++....+.|..|++.... ....+..... ...++++++|++.++...
T Consensus 177 ~~~~~~~~--~~p~gia~~~dg~~ly----v~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 177 TTLLLKEL--HVPGGAEVSADSSFVL----VAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp EEEEEEEE--SCCCEEEECTTSSEEE----EEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEE
T ss_pred EEEeccCC--ccCcceEECCCCCEEE----EEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCc
Confidence 43332221 2357899999998632 344556889999987421 1111111223 788999999986666544
Q ss_pred ---------CCcEEEEeCCCceeeccc
Q 022184 265 ---------DGDICVVDVKKMEINHWS 282 (301)
Q Consensus 265 ---------d~~i~i~~~~~~~~~~~~ 282 (301)
.+.|..+|.. ++.+..+
T Consensus 250 ~~~~~~~~~~~~v~~~d~~-G~~~~~~ 275 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEF-GNILEVI 275 (322)
T ss_dssp TTSSTTSCEEEEEEEECTT-SCEEEEE
T ss_pred ccccccCCCccEEEEECCC-CCEEEEE
Confidence 4678888874 5554443
No 243
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.05 E-value=8.4e-08 Score=71.98 Aligned_cols=183 Identities=8% Similarity=-0.024 Sum_probs=121.5
Q ss_pred CcceEEEECCCCCeEEEEecC--CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEE-EeecCCeEEEEe
Q 022184 64 GDPMTIAVNPSGDDFVCSTTN--GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHLRIMH 140 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d--~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~v~d 140 (301)
.-...+.|++ +..+.+.+.+ ..|+.+|+++++....... ..........+.++.|. ....++.+.+||
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l--------~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV--------PPPYFGAGIVAWRDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC--------CTTCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC--------CCCcceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 3466899986 5555566654 4899999999876443321 12233333344445554 445689999999
Q ss_pred CCCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCC----CCeeEEEEccCCCcceEEE
Q 022184 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD----EKIELCRFSKDGTKPFLFC 216 (301)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~ 216 (301)
..+.+.+.++...... ..++ ++++.|+.+..++.|.++|..+.+.+..+..... ..++.+.|. +|+.
T Consensus 92 ~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l----- 162 (243)
T 3mbr_X 92 LATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL----- 162 (243)
T ss_dssp TTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE-----
T ss_pred CCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE-----
Confidence 9999988777644322 3444 5677777777788999999999998888764321 134556665 5542
Q ss_pred EEEeCCcceEEEEEccCceEeeeeecc-------------CCCcEEEEEcCCCCEEEEeeC
Q 022184 217 TVQRGDKALLAVYDISTWNKIGHKRLL-------------RKPASVLSISLDGKYLAMGSK 264 (301)
Q Consensus 217 ~~~~~~~~~i~~~d~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~~~~ 264 (301)
.+..-.+..|.+.|.++++.+..+... ..-.+.++++|+++.|++.+.
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 244445779999999999987665422 135688999998776666654
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.05 E-value=7.1e-07 Score=69.04 Aligned_cols=178 Identities=10% Similarity=-0.014 Sum_probs=112.7
Q ss_pred CcceEEEECCCCCeEEEEe-cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec---CCeEEEE
Q 022184 64 GDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV---DGHLRIM 139 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~v~ 139 (301)
..+..+++++++..|+.+. ..+.|.+++++..... .+.. ........++++|++..|+.+.. .+.|..+
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFD------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEC------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-EEEE------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 4678999999766666554 4578999887654321 1110 01245689999997666655553 3688888
Q ss_pred eCCCcceecccc-cCCccEEEEEecCCCcEEEEE-eCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEE
Q 022184 140 HWPSLRIILDEP-KAHKSVLDMDFSLDSEFLATT-STDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCT 217 (301)
Q Consensus 140 d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 217 (301)
++..... ..+. ........++++|++..|+.+ ...+.|.++|+........+. . ......++.. +..+ .
T Consensus 152 ~~dg~~~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~-~~~P~gi~~d--~~~l----y 222 (267)
T 1npe_A 152 HMDGTNR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-G-LQYPFAVTSY--GKNL----Y 222 (267)
T ss_dssp ETTSCCC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-C-CCSEEEEEEE--TTEE----E
T ss_pred ecCCCCc-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-C-CCCceEEEEe--CCEE----E
Confidence 8754322 2221 222457899999987655544 456789999997654333333 2 2234566653 4442 3
Q ss_pred EEeCCcceEEEEEccCceEeeeeeccC-CCcEEEEEcCCCC
Q 022184 218 VQRGDKALLAVYDISTWNKIGHKRLLR-KPASVLSISLDGK 257 (301)
Q Consensus 218 ~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~ 257 (301)
++....+.|..+|..+++.+..+.... .....+++.|++.
T Consensus 223 va~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 223 YTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 455567899999999988877765443 2467788888764
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.05 E-value=9.4e-09 Score=82.10 Aligned_cols=200 Identities=13% Similarity=-0.001 Sum_probs=127.1
Q ss_pred CCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCC
Q 022184 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAH 154 (301)
Q Consensus 75 ~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 154 (301)
+..+..++.++.+..+|.+ ++....... ....+.++...+++. +..++.++.|..+|.. ++.........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~-------~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT-------KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC-------SSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC-------CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence 4567777778889888876 443222111 122344556666666 6667778999999988 76655554444
Q ss_pred ccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc
Q 022184 155 KSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234 (301)
Q Consensus 155 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 234 (301)
..+.++...+++..++.. +.+..+| .+++......... ..+.++...++|. +..++.++.|..+|. ++
T Consensus 177 ~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~-~~~~~~~~~~~g~------l~v~t~~~gl~~~~~-~g 244 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGY-WTVTRPAISEDGT------IYVTSLDGHLYAINP-DG 244 (330)
T ss_dssp CCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSS-CCCSCCEECTTSC------EEEEETTTEEEEECT-TS
T ss_pred CceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCC-cceeceEECCCCe------EEEEcCCCeEEEECC-CC
Confidence 556677777777755444 8899999 7777666655332 3578888888887 455666778888885 45
Q ss_pred eEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEEccCC
Q 022184 235 NKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 235 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 300 (301)
+.+.........+..+...+++ .|.+++.+|.|..+|. +++...... .. ...+.++...++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~-~~-~~~~~~~~~d~~g 306 (330)
T 3hxj_A 245 TEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFE-TG-SWIIATPVIDENG 306 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEE-CS-SCCCSCCEECTTC
T ss_pred CEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEE-cC-CccccceEEcCCC
Confidence 5554444444444556666666 4667777888999996 565544432 22 3445555555554
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.03 E-value=4.7e-08 Score=74.00 Aligned_cols=180 Identities=10% Similarity=-0.016 Sum_probs=122.0
Q ss_pred ceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEE-EEeecCCeEEEEeCCCc
Q 022184 66 PMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLRIMHWPSL 144 (301)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~v~d~~~~ 144 (301)
...+.|+ ++.++.+.+.+|.|+++|+++++..... .. .........++++.| .....++.+.+||..+.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~--------~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL--------GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC--------TTCCEEEEEECSSCEEEEESSSCEEEEEETTTT
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC--------CCcceeEEEEeCCEEEEEEccCCEEEEEECCcC
Confidence 4688887 3556667778889999999998875444 11 122222233444444 44456899999999999
Q ss_pred ceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCC----CCeeEEEEccCCCcceEEEEEEe
Q 022184 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD----EKIELCRFSKDGTKPFLFCTVQR 220 (301)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~ 220 (301)
+.+.++.... .-..++ +|++.|+.+..++.|.++|..+.+.+..+..... ..++.+.|. +|+. .+..
T Consensus 127 ~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l-----yanv 197 (268)
T 3nok_A 127 QRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI-----YANI 197 (268)
T ss_dssp EEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE-----EEEE
T ss_pred cEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE-----EEEE
Confidence 9887776432 223444 5678777777789999999999998888764321 134667777 6642 2444
Q ss_pred CCcceEEEEEccCceEeeeeecc-------------CCCcEEEEEcCCCCEEEEeeC
Q 022184 221 GDKALLAVYDISTWNKIGHKRLL-------------RKPASVLSISLDGKYLAMGSK 264 (301)
Q Consensus 221 ~~~~~i~~~d~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~~~~ 264 (301)
-.+..|.+.|.++++.+..+... ..-.+.++++|+++.|++.+.
T Consensus 198 w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 198 WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 56779999999999887655432 135688999998765555543
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.02 E-value=8.1e-08 Score=76.63 Aligned_cols=190 Identities=13% Similarity=0.043 Sum_probs=124.3
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~ 142 (301)
...+.++...+++. +..++.++.|..+|.. ++....... ....+.++...+++.+++ ++ +.|..+| .
T Consensus 136 ~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-------~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~ 202 (330)
T 3hxj_A 136 KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT-------NDAITSAASIGKDGTIYF-GS--DKVYAIN-P 202 (330)
T ss_dssp SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC-------SSCCCSCCEECTTCCEEE-ES--SSEEEEC-T
T ss_pred CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec-------CCCceeeeEEcCCCEEEE-Ee--CEEEEEC-C
Confidence 34466677777776 5566777889999987 443222211 123455566667776544 44 7799999 7
Q ss_pred CcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCC
Q 022184 143 SLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD 222 (301)
Q Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 222 (301)
+++...........+.++...+++. |..++.++.+..+|. +++.+..+.... ..+..+...+++. +..++.
T Consensus 203 ~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~g~------l~v~t~ 273 (330)
T 3hxj_A 203 DGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGK-RIESSPVIGNTDT------IYFGSY 273 (330)
T ss_dssp TSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSS-CCCSCCEECTTSC------EEEECT
T ss_pred CCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCC-CccccceEcCCCe------EEEecC
Confidence 7766655554445677888888775 555666788888874 566655554332 2345566666776 567778
Q ss_pred cceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCc
Q 022184 223 KALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKM 276 (301)
Q Consensus 223 ~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~ 276 (301)
++.|..+|. +++.+.........+.++..+++++ |..++.+|.+++...+..
T Consensus 274 ~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 274 DGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp TCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred CCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 888999996 5666655555556677777878876 566888999998887543
No 248
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.00 E-value=1.4e-06 Score=70.11 Aligned_cols=206 Identities=3% Similarity=-0.079 Sum_probs=126.1
Q ss_pred CcceEEEECCCCCeEEEEe-cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEE-EEeecCCeEEEEeC
Q 022184 64 GDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLRIMHW 141 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~v~d~ 141 (301)
..+..++|++....|..+. ..+.|+.+++.+..... +.. ........+++.+.+..| ++-...+.|.+.++
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-~~~------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~ 145 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-VVS------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANL 145 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EEC------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceE-EEe------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcC
Confidence 3478999998766666554 46778888877654211 110 112345788998855555 44455688999998
Q ss_pred CCcceecccccCCccEEEEEecCCCcEEEEE-eCC-CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEE
Q 022184 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATT-STD-GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (301)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d-~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (301)
+.................++++|.+..|+.. ... +.|..+++..... ..+....-.....++++|++..+| ++
T Consensus 146 dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY----~a 220 (349)
T 3v64_C 146 DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMY----WV 220 (349)
T ss_dssp TSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEE----EE
T ss_pred CCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEE----EE
Confidence 6543322222233567899999965554444 444 7788888765433 222222233578999999887643 44
Q ss_pred eCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 220 RGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 220 ~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
-...+.|..+|+..................+++. ++.++++-...+.|..++..+++....+
T Consensus 221 D~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 221 DAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred ECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 5567899999987543222222223456778883 4444555556678888886666554444
No 249
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.00 E-value=2.1e-07 Score=81.84 Aligned_cols=189 Identities=12% Similarity=0.128 Sum_probs=124.7
Q ss_pred eEEEECCCCCeEEEEecCCc-------------------EEEEEEcCCccccccccccCC--CCCCCCCeeEEEEeeCCC
Q 022184 67 MTIAVNPSGDDFVCSTTNGG-------------------CKLFEVYGGATDINLLAKKMP--PLQDAGPQKCLSFSVDGS 125 (301)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~-------------------i~~w~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~ 125 (301)
..++++|++..++.+..++. |..+|.++++........... ......+........+|+
T Consensus 238 ~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 238 DSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 46888998888888877753 999999988876554322111 111122222333334665
Q ss_pred ---EEEEeecCCeEEEEeCCCcceecccccCC----------------------------c-----------cEEEEEec
Q 022184 126 ---RFAAGGVDGHLRIMHWPSLRIILDEPKAH----------------------------K-----------SVLDMDFS 163 (301)
Q Consensus 126 ---~l~~~~~dg~i~v~d~~~~~~~~~~~~~~----------------------------~-----------~i~~~~~~ 163 (301)
.++.++.+|.++++|.++|+.+....... . .-..++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 78899999999999999998763211100 0 01136788
Q ss_pred CCCcEEEEEeC---------------------------------------------CCcEEEEeCCCCceEEEEeecCCC
Q 022184 164 LDSEFLATTST---------------------------------------------DGSARIWKTEDGVAWTFLTRNSDE 198 (301)
Q Consensus 164 ~~~~~l~~~~~---------------------------------------------d~~i~i~d~~~~~~~~~~~~~~~~ 198 (301)
|+..++++... +|.|+.||+++++.+-.+..+..
T Consensus 398 p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~- 476 (689)
T 1yiq_A 398 PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI- 476 (689)
T ss_dssp TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-
T ss_pred CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-
Confidence 88777766522 37799999999998877765432
Q ss_pred CeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCC-CcEEEEEcCCCC-EEEEe
Q 022184 199 KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRK-PASVLSISLDGK-YLAMG 262 (301)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~-~l~~~ 262 (301)
...-.+...+.. ++.++.|+.|+.||.++++.+-.+..... ...-+.|..+|+ |+++.
T Consensus 477 -~~~g~~~taggl-----vf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 477 -FNGGTLSTAGNL-----VFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp -CCCCEEEETTTE-----EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred -ccCccceECCCE-----EEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 333456666665 56678999999999999999877765432 234467778886 44443
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.98 E-value=1.3e-06 Score=71.40 Aligned_cols=207 Identities=3% Similarity=-0.094 Sum_probs=127.2
Q ss_pred CCcceEEEECCCCCeEEEEe-cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEE-EEeecCCeEEEEe
Q 022184 63 EGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLRIMH 140 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~v~d 140 (301)
...+..++|++.+..|+.+. ..+.|+.+++++...... .. ........+++.+.+..| ++-...+.|.+.+
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~-~~------~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV-VS------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE-EC------SSCSCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE-Ee------CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 34578999998666666554 457788888776542111 11 111234678888855555 4445567899988
Q ss_pred CCCcceecccccCCccEEEEEecCCCcEEEEEe-CC-CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEE
Q 022184 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS-TD-GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (301)
+..................++++|.+..|+... .. +.|..+++.......... ..-.....++++|++..+| +
T Consensus 188 ~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~~~~PnGlavd~~~~~lY----~ 262 (386)
T 3v65_B 188 LDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRRMY----W 262 (386)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEEGGGTEEE----E
T ss_pred CCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-CCCCCeeeEEEeCCCCEEE----E
Confidence 865433222223335678999999766555444 34 678888886544333332 2233478999999887643 4
Q ss_pred EeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 219 QRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 219 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
+-...+.|..+|+..................+++. .+.++++-...+.|..++..+++....+
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 263 VDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 45667899999987543322222233456778883 4445555556788999997666655444
No 251
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.97 E-value=1.2e-07 Score=84.34 Aligned_cols=199 Identities=11% Similarity=0.012 Sum_probs=113.8
Q ss_pred ccCC-cceEEEEC-CCCCeEEEEec-CC----cEEEEEEcCC-ccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec
Q 022184 61 ESEG-DPMTIAVN-PSGDDFVCSTT-NG----GCKLFEVYGG-ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV 132 (301)
Q Consensus 61 ~h~~-~v~~~~~~-~~~~~l~~~~~-d~----~i~~w~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 132 (301)
+|.- .+...+|| |||++||.+.. +| +|+++|+.++ +.... .+ ......++|+|||+.|+....
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------~~--~~~~~~~~WspDg~~l~y~~~ 240 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------KV--SGTNGEIVWGPDHTSLFYVTK 240 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------CE--EEECSCCEECSSTTEEEEEEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------cc--cCceeeEEEecCCCEEEEEEE
Confidence 3443 67889999 99998886543 33 4999999887 52111 01 011346899999998887766
Q ss_pred C-----CeEEEEeCCCccee--cccc-cCCccEEEEEecCCCcEEEEEeC---CCcEEEEeCCCCc-eE--EEEeecCCC
Q 022184 133 D-----GHLRIMHWPSLRII--LDEP-KAHKSVLDMDFSLDSEFLATTST---DGSARIWKTEDGV-AW--TFLTRNSDE 198 (301)
Q Consensus 133 d-----g~i~v~d~~~~~~~--~~~~-~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~-~~--~~~~~~~~~ 198 (301)
+ ..|+++++.+++.. ..+. ........+.|+|||++|+..+. ...|.++|+.++. .. ..+......
T Consensus 241 d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~ 320 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG 320 (751)
T ss_dssp CTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT
T ss_pred CCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC
Confidence 5 36888888765421 1111 22234668899999998877653 3468889988752 22 333332333
Q ss_pred CeeEEEEccCCCcceEEEEEEeC---CcceEEEEEccCceEeee-eeccCC--CcEEEEEcCCCCEEEEeeCCCc--EEE
Q 022184 199 KIELCRFSKDGTKPFLFCTVQRG---DKALLAVYDISTWNKIGH-KRLLRK--PASVLSISLDGKYLAMGSKDGD--ICV 270 (301)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~d~~~~~~~~~-~~~~~~--~v~~~~~s~~~~~l~~~~~d~~--i~i 270 (301)
....+.|+. |..++ +.+.. ....|..+|+.+...... +..+.. .+..+.+. .+.++++...++. |.+
T Consensus 321 ~~~s~~~~~-g~~l~---~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 321 VRYDVQMHG-TSHLV---ILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp CCEEEEEET-TTEEE---EEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred ceEEEeeee-CCEEE---EEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence 344454433 55422 12221 345788888765211122 222333 33444444 2344555566664 566
Q ss_pred EeC
Q 022184 271 VDV 273 (301)
Q Consensus 271 ~~~ 273 (301)
+++
T Consensus 396 ~dl 398 (751)
T 2xe4_A 396 MMA 398 (751)
T ss_dssp EEC
T ss_pred Eec
Confidence 675
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.96 E-value=3.1e-07 Score=73.20 Aligned_cols=201 Identities=13% Similarity=0.017 Sum_probs=118.2
Q ss_pred CcceEEEECC-CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeec---------
Q 022184 64 GDPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGV--------- 132 (301)
Q Consensus 64 ~~v~~~~~~~-~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~--------- 132 (301)
..+..+++.+ +++ |+.+...+.|..++..++... .+... ... ........+++.+ +|++.++-..
T Consensus 80 ~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~-~~~~~-~~~-~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 80 GRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHAT-QLATS-VDG-VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp CCEEEEEEETTTTE-EEEEETTTEEEEECTTCEECE-EEESE-ETT-EECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred CCCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEE-Eeccc-CCC-CcccccceEEEecCCCEEEEECCcccccccccc
Confidence 3578999998 554 555555555777776544321 11100 000 0113467899999 8986665432
Q ss_pred --------CCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEE-eCCCcEEEEeCCCCc--eEEEEeecCCCCee
Q 022184 133 --------DGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATT-STDGSARIWKTEDGV--AWTFLTRNSDEKIE 201 (301)
Q Consensus 133 --------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~--~~~~~~~~~~~~v~ 201 (301)
++.|..+|..+++... +.........++++|+++.|+.+ ...+.|.+|++.... ....+.. ... ..
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~-~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~ 232 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTL-LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PG 232 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEE-EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EE
T ss_pred eehcccCCCceEEEEeCCCCEEEE-eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CC
Confidence 3678888876665322 11112345679999999866555 556899999987521 1222222 223 78
Q ss_pred EEEEccCCCcceEEEEEEe--------CCcceEEEEEccCceEeeeeeccC----CCcEEEEEcCCCCEEEEeeCCCcEE
Q 022184 202 LCRFSKDGTKPFLFCTVQR--------GDKALLAVYDISTWNKIGHKRLLR----KPASVLSISLDGKYLAMGSKDGDIC 269 (301)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~d~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~d~~i~ 269 (301)
.+++.++|+. ++. ... +..+.|..+|.. ++.+..+.... ..++.+++ .+++++++...++.|.
T Consensus 233 gi~~d~~G~l-~va--~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 233 NIKRNADGHF-WVS--SSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVG 307 (322)
T ss_dssp EEEECTTSCE-EEE--EEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEE
T ss_pred CeEECCCCCE-EEE--ecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceE
Confidence 8999999974 321 111 124678889875 55555554332 34666766 4566666666778899
Q ss_pred EEeCCCc
Q 022184 270 VVDVKKM 276 (301)
Q Consensus 270 i~~~~~~ 276 (301)
.+++...
T Consensus 308 ~~~~~~~ 314 (322)
T 2fp8_A 308 ILVYDKK 314 (322)
T ss_dssp EEEC---
T ss_pred EEecccc
Confidence 9987643
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.94 E-value=1.5e-06 Score=68.63 Aligned_cols=226 Identities=12% Similarity=0.049 Sum_probs=125.0
Q ss_pred eeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC
Q 022184 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (301)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 85 (301)
-...++|.++ ++++++... .+ +|+.+++.+.... ... ....+..+++.++|+.+++.....
T Consensus 33 ~pegia~~~~---g~lyv~d~~------~~--~I~~~d~~g~~~~-----~~~---~~~~p~gia~~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 33 FLENLASAPD---GTIFVTNHE------VG--EIVSITPDGNQQI-----HAT---VEGKVSGLAFTSNGDLVATGWNAD 93 (306)
T ss_dssp CEEEEEECTT---SCEEEEETT------TT--EEEEECTTCCEEE-----EEE---CSSEEEEEEECTTSCEEEEEECTT
T ss_pred CcceEEECCC---CCEEEEeCC------CC--eEEEECCCCceEE-----EEe---CCCCceeEEEcCCCcEEEEeccCC
Confidence 3456778765 444444221 12 5677777653221 111 134688999999998655543332
Q ss_pred --cEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcce-ec---------ccccC
Q 022184 86 --GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI-IL---------DEPKA 153 (301)
Q Consensus 86 --~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~-~~---------~~~~~ 153 (301)
.|..++..+++... +.. . ........++..+++..+++-..++.|+.+|..+++. +. .....
T Consensus 94 ~~~v~~~d~~~g~~~~-~~~--~---~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~ 167 (306)
T 2p4o_A 94 SIPVVSLVKSDGTVET-LLT--L---PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESV 167 (306)
T ss_dssp SCEEEEEECTTSCEEE-EEE--C---TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCC
T ss_pred cceEEEEcCCCCeEEE-EEe--C---CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCC
Confidence 35555655554311 111 1 1112234455445544444444578999999765421 11 00011
Q ss_pred CccEEEEEecCCCcEEEEE-eCCCcEEEEeCCC-Cce--EEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEE
Q 022184 154 HKSVLDMDFSLDSEFLATT-STDGSARIWKTED-GVA--WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVY 229 (301)
Q Consensus 154 ~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (301)
-.....+ +|+++.|+.+ ...+.|..+++.. ++. ...+... .....+++.++|+. .++....+.|.++
T Consensus 168 ~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l-----~va~~~~~~V~~~ 238 (306)
T 2p4o_A 168 FPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNL-----YGATHIYNSVVRI 238 (306)
T ss_dssp SCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCE-----EEECBTTCCEEEE
T ss_pred CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCE-----EEEeCCCCeEEEE
Confidence 1234555 7888755544 4667899999874 321 1222211 23678999999974 3444556789999
Q ss_pred EccCceEe--eeeeccCCCcEEEEEc---CCCCEEEEeeCCC
Q 022184 230 DISTWNKI--GHKRLLRKPASVLSIS---LDGKYLAMGSKDG 266 (301)
Q Consensus 230 d~~~~~~~--~~~~~~~~~v~~~~~s---~~~~~l~~~~~d~ 266 (301)
|.. ++.. ..+...-...++++|. |+++.|++++..+
T Consensus 239 ~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 239 APD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 976 4442 2233333568999998 8888777776543
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=1.3e-06 Score=76.69 Aligned_cols=199 Identities=9% Similarity=0.051 Sum_probs=127.5
Q ss_pred CCcEEEEEEcCCccccccccccCC-CC-----------------------CCCCCeeEEEEeeCCCEEEEeecCC-----
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMP-PL-----------------------QDAGPQKCLSFSVDGSRFAAGGVDG----- 134 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~-~~-----------------------~~~~~v~~~~~s~~~~~l~~~~~dg----- 134 (301)
++.|..+|.++++...+....... .. .+......++++|+..+++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 578999998888775544321000 00 0011123578888888888887665
Q ss_pred --------------eEEEEeCCCcceecccccCC---------ccEEEEEecCCCc---EEEEEeCCCcEEEEeCCCCce
Q 022184 135 --------------HLRIMHWPSLRIILDEPKAH---------KSVLDMDFSLDSE---FLATTSTDGSARIWKTEDGVA 188 (301)
Q Consensus 135 --------------~i~v~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~ 188 (301)
.|..+|.++++.+....... .+.....+..+|+ .++.++.+|.+.++|.++|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 39999999999876654321 2222233334665 688899999999999999998
Q ss_pred EEEEeecC-----------CCC------------------------eeEEEEccCCCcceEEEE----------------
Q 022184 189 WTFLTRNS-----------DEK------------------------IELCRFSKDGTKPFLFCT---------------- 217 (301)
Q Consensus 189 ~~~~~~~~-----------~~~------------------------v~~~~~~~~~~~~~~~~~---------------- 217 (301)
+....... ..+ -..++++|+...+|+-..
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 85443211 000 012577777665332110
Q ss_pred ---E------------EeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 218 ---V------------QRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 218 ---~------------~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
. ....++.|..||+.+++.+-..... .+.....+...+.++++++.|+.++.||.++++.+..+
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEe
Confidence 0 1123588999999999887555433 23333345556788999999999999999999988766
Q ss_pred c
Q 022184 283 K 283 (301)
Q Consensus 283 ~ 283 (301)
.
T Consensus 496 ~ 496 (668)
T 1kv9_A 496 E 496 (668)
T ss_dssp E
T ss_pred c
Confidence 4
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.91 E-value=1.5e-06 Score=66.16 Aligned_cols=203 Identities=8% Similarity=0.069 Sum_probs=127.0
Q ss_pred ccccCCcceEEEECCCCCeEEE-EecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEE
Q 022184 59 FDESEGDPMTIAVNPSGDDFVC-STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137 (301)
Q Consensus 59 ~~~h~~~v~~~~~~~~~~~l~~-~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 137 (301)
+.+-.+.+..++|+|++..|++ ...++.|...|.+ ++...++. +......-.+++.+++.++++.-.++.+.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~------l~g~~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP------LDFVKDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE------CSSCSSEEEEEECSTTEEEEEETTTTEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe------cCCCCChHHeEEeCCCEEEEEECCCCcEE
Confidence 4455567999999998776654 5666777777776 43322221 12235677889988887666655677888
Q ss_pred EEeCCCccee---ccc------ccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCC---CCceEEEEee------cCCCC
Q 022184 138 IMHWPSLRII---LDE------PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE---DGVAWTFLTR------NSDEK 199 (301)
Q Consensus 138 v~d~~~~~~~---~~~------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~------~~~~~ 199 (301)
++++.....+ ... .........++|+|+++.|.++.......+|.++ ....+..+.. ..-..
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 8887543321 111 1123457899999998777776655555555553 1112222211 11224
Q ss_pred eeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC---------CCcEEEEEcCCCCEEEEeeCCCcEEE
Q 022184 200 IELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR---------KPASVLSISLDGKYLAMGSKDGDICV 270 (301)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~d~~i~i 270 (301)
+..+++.|...++ ++.+.....|..+|... +.+..+.... .....++|+++|+ |+..++-+.++.
T Consensus 175 ~S~l~~dp~tg~l----liLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~ 248 (255)
T 3qqz_A 175 VSGAEFNQQKNTL----LVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYR 248 (255)
T ss_dssp CCEEEEETTTTEE----EEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEE
T ss_pred ceeEEEcCCCCeE----EEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEE
Confidence 7899999988764 35567788999999764 4544443332 2567899999998 444577777777
Q ss_pred EeCC
Q 022184 271 VDVK 274 (301)
Q Consensus 271 ~~~~ 274 (301)
|.-.
T Consensus 249 f~~~ 252 (255)
T 3qqz_A 249 FTPQ 252 (255)
T ss_dssp EEC-
T ss_pred EEec
Confidence 7653
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.91 E-value=2.4e-05 Score=70.21 Aligned_cols=227 Identities=10% Similarity=0.037 Sum_probs=141.1
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~ 142 (301)
...|.++...++|...+ |+.+| |.+|+..+...............-....|.++...++|. |-.|+.++-|..++..
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 45699999998887554 44555 888987655432111000000111235789999988887 5556766778888875
Q ss_pred Ccceeccc--c----cCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee-------cCCCCeeEEEEccCC
Q 022184 143 SLRIILDE--P----KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR-------NSDEKIELCRFSKDG 209 (301)
Q Consensus 143 ~~~~~~~~--~----~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~ 209 (301)
+....... . -....|.++...++|+ |..|+.++-|..||..+++....... -....|.++...+++
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred cccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 54321110 0 0234699999888886 44567777899999877654332211 112458888888888
Q ss_pred CcceEEEEEEeCCcceEEEEEccCceEeeeee----ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccc-
Q 022184 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKR----LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR- 284 (301)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~- 284 (301)
.. +..+..++-|..||..+++...... .....|.++...++|++.+.. . +-+.+|+..+++.......
T Consensus 418 ~~-----lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~ 490 (795)
T 4a2l_A 418 SL-----VYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEK 490 (795)
T ss_dssp TE-----EEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCT
T ss_pred CE-----EEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccc
Confidence 72 2445555669999988765432211 224578899988888755544 4 4589999888765433211
Q ss_pred ----cccCccEEEEEEccCCC
Q 022184 285 ----LHLGTSIALVEFCPTQR 301 (301)
Q Consensus 285 ----~~~~~~v~~~~~spdg~ 301 (301)
.. ...|.++...++|+
T Consensus 491 ~~~~~~-~~~i~~i~~d~~g~ 510 (795)
T 4a2l_A 491 DGTPVV-SKQITTLFRDSHKR 510 (795)
T ss_dssp TCCBCC-CCCEEEEEECTTCC
T ss_pred cccccC-CceEEEEEECCCCC
Confidence 12 35688888887764
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.88 E-value=2e-05 Score=70.74 Aligned_cols=225 Identities=12% Similarity=0.047 Sum_probs=139.9
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCC-CCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPP-LQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW 141 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~ 141 (301)
...|.++...++|. |..|+.++-|..|+..++............. .-....|.++...++++.|.+|+.++-|..+|.
T Consensus 356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 45699999988886 4456666559999876554311110000000 012356889988888875667777777999998
Q ss_pred CCcceecccc----cCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee-----cCCCCeeEEEEccCCCcc
Q 022184 142 PSLRIILDEP----KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR-----NSDEKIELCRFSKDGTKP 212 (301)
Q Consensus 142 ~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~ 212 (301)
.+++...-.. .....|.++...++|++.+.. . +-+.+||..+++....... .....|.++...++|..
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l- 511 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL- 511 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE-
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE-
Confidence 7765422111 123578999988888755544 3 4588899877654332211 11245889999988884
Q ss_pred eEEEEEEeCCcceEEEEEccCceEeeeee-------ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccc-c
Q 022184 213 FLFCTVQRGDKALLAVYDISTWNKIGHKR-------LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK-R 284 (301)
Q Consensus 213 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~ 284 (301)
..++. +-|..||..+.+. . +. .....|.++..+++|++.+.. .. -|..||..+.+...... .
T Consensus 512 -----Wigt~-~Gl~~~~~~~~~~-~-~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~~~~~~~~~~ 581 (795)
T 4a2l_A 512 -----WIGGE-EGLSVFKQEGLDI-Q-KASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDKQIKRYNTTN 581 (795)
T ss_dssp -----EEEES-SCEEEEEEETTEE-E-ECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEEEECGGG
T ss_pred -----EEEeC-CceEEEeCCCCeE-E-EecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCCcEEEeCCCC
Confidence 44444 4588899877654 2 21 123568899999998855544 33 58889987765443211 1
Q ss_pred cccCccEEEEEEccCCC
Q 022184 285 LHLGTSIALVEFCPTQR 301 (301)
Q Consensus 285 ~~~~~~v~~~~~spdg~ 301 (301)
+-....|.++...++|+
T Consensus 582 gl~~~~i~~i~~d~~g~ 598 (795)
T 4a2l_A 582 GLPNNVVYGILEDSFGR 598 (795)
T ss_dssp TCSCSCEEEEEECTTSC
T ss_pred CCchhheEEEEECCCCC
Confidence 11145688888887764
No 258
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.87 E-value=1e-06 Score=77.31 Aligned_cols=256 Identities=11% Similarity=0.007 Sum_probs=137.0
Q ss_pred EEeeeecCCCccEEEecCCcccc---CCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec-C
Q 022184 9 CGSWIKRPENVNLVVLGKSSRAS---SSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT-N 84 (301)
Q Consensus 9 ~~~w~~~~~~~~~~~~g~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d 84 (301)
.+++.+ .++.+++.|+..... ...+.-.++.||+....+...+.. ...+.....++++..+++.++.|+. +
T Consensus 190 ~~av~~--~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~---~~~~~~~~~~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEP--TSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT---VTKHDMFCPGISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp EEEEET--TTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE---ECSCCCSSCEEEECTTSCEEEECSSST
T ss_pred eEEEEe--cCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc---CCCCCCccccccCCCCCCEEEeCCCCC
Confidence 345553 125677776643211 012333677788777655322111 1122333456788889999999884 4
Q ss_pred CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-cC-----CeEEEEeCCCcceeccc----ccCC
Q 022184 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VD-----GHLRIMHWPSLRIILDE----PKAH 154 (301)
Q Consensus 85 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-----g~i~v~d~~~~~~~~~~----~~~~ 154 (301)
..+.+||..+.+-.. ...+.....-.+++..+++++++.|+ .+ ..+.+||..+.+-...- ....
T Consensus 265 ~~v~~yd~~t~~W~~------~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~ 338 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIP------GPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPML 338 (656)
T ss_dssp TCEEEEEGGGTEEEE------CCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGC
T ss_pred CceEEecCcCCceeE------CCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccc
Confidence 579999987664311 11222222224456667899999988 34 56899998776532210 0000
Q ss_pred ccEEEEEecCCCcEEEEEeCCC---------cEEEEeCCCCceEEEEeecCC--------CCeeEEEEccCCCcceEEEE
Q 022184 155 KSVLDMDFSLDSEFLATTSTDG---------SARIWKTEDGVAWTFLTRNSD--------EKIELCRFSKDGTKPFLFCT 217 (301)
Q Consensus 155 ~~i~~~~~~~~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~ 217 (301)
..-....+..++..++.++.++ .+..||..+............ ..-.++.|...+..+ +
T Consensus 339 ~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i----~ 414 (656)
T 1k3i_A 339 TADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKI----L 414 (656)
T ss_dssp CCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEE----E
T ss_pred cccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeE----E
Confidence 0000012234555556665443 467888887664433322111 112344454433332 3
Q ss_pred EEeCCcc-----------eEEEEEccCceEeeee--eccCCC-cEEEEEcCCCCEEEEeeCC-----------CcEEEEe
Q 022184 218 VQRGDKA-----------LLAVYDISTWNKIGHK--RLLRKP-ASVLSISLDGKYLAMGSKD-----------GDICVVD 272 (301)
Q Consensus 218 ~~~~~~~-----------~i~~~d~~~~~~~~~~--~~~~~~-v~~~~~s~~~~~l~~~~~d-----------~~i~i~~ 272 (301)
+.++.+. .|.+||..+.+-.... ...... -.+++..|++++++.|+.+ ..+.+||
T Consensus 415 v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~yd 494 (656)
T 1k3i_A 415 TFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYV 494 (656)
T ss_dssp EECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEE
T ss_pred EEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEc
Confidence 4444321 6888888765433221 111122 2345667899999999864 4689999
Q ss_pred CCCceee
Q 022184 273 VKKMEIN 279 (301)
Q Consensus 273 ~~~~~~~ 279 (301)
..+.+..
T Consensus 495 p~t~~W~ 501 (656)
T 1k3i_A 495 PEQDTFY 501 (656)
T ss_dssp GGGTEEE
T ss_pred CCCCcee
Confidence 9876543
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.86 E-value=3.6e-07 Score=81.29 Aligned_cols=158 Identities=6% Similarity=-0.051 Sum_probs=97.5
Q ss_pred CeeEEEEe-eCCCEEEEeec-C----CeEEEEeCCCc-ceecccccCCccEEEEEecCCCcEEEEEeCC-----CcEEEE
Q 022184 114 PQKCLSFS-VDGSRFAAGGV-D----GHLRIMHWPSL-RIILDEPKAHKSVLDMDFSLDSEFLATTSTD-----GSARIW 181 (301)
Q Consensus 114 ~v~~~~~s-~~~~~l~~~~~-d----g~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~ 181 (301)
.+...+|| |||++|+.+.. + ..|+++|+.++ +.+.... ......++|+||++.|+....| ..|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~--~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV--SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE--EEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc--cCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 56789999 99999886643 2 35999999988 6321110 1123468899999988777765 258888
Q ss_pred eCCCCce--EEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc--eE--eeeeeccCCCcEEEEEcCC
Q 022184 182 KTEDGVA--WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW--NK--IGHKRLLRKPASVLSISLD 255 (301)
Q Consensus 182 d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~--~~~~~~~~~~v~~~~~s~~ 255 (301)
++.++.. ...+..........+.|+|||+++++ .........|.++|+.++ +. .............+.|+.+
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~--~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g 330 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCI--GSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGT 330 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEE--EEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEE--EecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeC
Confidence 8877642 23333222334667899999997433 233445678999999875 22 2122223345555655544
Q ss_pred CCEEEEeeCC----CcEEEEeCCC
Q 022184 256 GKYLAMGSKD----GDICVVDVKK 275 (301)
Q Consensus 256 ~~~l~~~~~d----~~i~i~~~~~ 275 (301)
+.+++....+ ..|..+++.+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTS
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCC
Confidence 4444444333 3677777765
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.84 E-value=1.9e-05 Score=62.61 Aligned_cols=208 Identities=7% Similarity=-0.072 Sum_probs=124.9
Q ss_pred CCcceEEEECCCCCeEEEEe-cCCcEEEEEEcCC---ccccccccccCCCCCCCCCeeEEEEeeCCCEEE-EeecCCeEE
Q 022184 63 EGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGG---ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHLR 137 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~ 137 (301)
...+..++|++.+..|+.+. ..+.|+.+++.+. ........ ........+++++.+..|+ +-...+.|.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~------~~~~~p~glavd~~~~~ly~~d~~~~~I~ 102 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------RDIQAPDGLAVDWIHSNIYWTDSVLGTVS 102 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC------SSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe------CCCCCcCEEEEeecCCeEEEEECCCCEEE
Confidence 34578999998776666554 4578988888752 11111110 1113457889987555554 445678999
Q ss_pred EEeCCCcceecccccCCccEEEEEecCCCcEEEEEeC-C-CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 138 IMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST-D-GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 138 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
++++..................++++|.+..|+.+.. . +.|...++.. .....+....-.....+++++++..+|
T Consensus 103 ~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY-- 179 (316)
T 1ijq_A 103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLY-- 179 (316)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEE--
T ss_pred EEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEE--
Confidence 9998654332222223346789999996665554443 2 6788888754 333333322234578999999887643
Q ss_pred EEEEeCCcceEEEEEccCceEeeeeec--cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 216 CTVQRGDKALLAVYDISTWNKIGHKRL--LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
++....+.|..+|+........... .......+++. .+.++++-...+.|..++..+++....+
T Consensus 180 --~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 180 --WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp --EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred --EEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 4556678999999875332211121 12345778885 3455555556688999998776654443
No 261
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=1.6e-06 Score=71.83 Aligned_cols=154 Identities=6% Similarity=0.036 Sum_probs=98.2
Q ss_pred cceEEEECC-CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC-C----eEEE
Q 022184 65 DPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-G----HLRI 138 (301)
Q Consensus 65 ~v~~~~~~~-~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g----~i~v 138 (301)
....++++| ++..|..+...+.|+.+|++++..... . ........++|++++++|+++... + .+.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~-~-------~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTV-Y-------SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEE-E-------CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEE-e-------cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 568899998 456676666657788888776543211 1 123567899999999966666542 1 3343
Q ss_pred EeCCCccee--cccccCCccEEEEEecC-CCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 139 MHWPSLRII--LDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 139 ~d~~~~~~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
++. .+... ..+. .......++++| ++.++++-..++.|..++...+................++|+|+++++
T Consensus 210 ~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l--- 284 (430)
T 3tc9_A 210 LTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA--- 284 (430)
T ss_dssp EEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE---
T ss_pred EeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE---
Confidence 442 33221 1111 123457788999 676666666778999999987654333332222347899999999963
Q ss_pred EEEEeCCcceEEEEEcc
Q 022184 216 CTVQRGDKALLAVYDIS 232 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~ 232 (301)
.++....+.|..++..
T Consensus 285 -yv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 285 -YIVVVNQHYILRSDYD 300 (430)
T ss_dssp -EEEETTTTEEEEEEEE
T ss_pred -EEEECCCCEEEEEeCC
Confidence 3455667889998765
No 262
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.83 E-value=5.6e-06 Score=67.36 Aligned_cols=189 Identities=8% Similarity=0.006 Sum_probs=118.3
Q ss_pred CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccC
Q 022184 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (301)
Q Consensus 74 ~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 153 (301)
++..++.++.++.|..+|.++++.......... . ...+ .. .+..+++++.++.|..+|..+++.+......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~--~-~~~p----~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE--A-LSRP----VV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSC--C-CSCC----EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc--e-EcCC----EE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCC
Confidence 456788888899999999988876443322110 0 0111 11 2457888888999999999999876655432
Q ss_pred CccE-----EEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCe---eE---EEEcc--CCCcceEEEEEEe
Q 022184 154 HKSV-----LDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKI---EL---CRFSK--DGTKPFLFCTVQR 220 (301)
Q Consensus 154 ~~~i-----~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v---~~---~~~~~--~~~~~~~~~~~~~ 220 (301)
.... ...... +..++.++.++.+..+|.++++.+-.......... .. +.-.| .+.. +..+
T Consensus 173 ~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----v~~~ 245 (376)
T 3q7m_A 173 MPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGV-----VFAL 245 (376)
T ss_dssp C-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTE-----EEEE
T ss_pred CCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCE-----EEEE
Confidence 2111 111222 44677788899999999999988776653221000 00 00111 1232 4556
Q ss_pred CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 221 GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 221 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
+.++.+..+|.++++.+-.... .....+.. ++..+++++.++.|..+|..+++.+...
T Consensus 246 ~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 246 AYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp CTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred ecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEee
Confidence 7788999999999887644432 23344444 4667888888999999999998866443
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.80 E-value=6.8e-06 Score=66.15 Aligned_cols=199 Identities=9% Similarity=-0.054 Sum_probs=121.6
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHW 141 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~ 141 (301)
.+...|.+..+ ..+|+.+. ...|+..++.+..... . ......+..++|++....|+.. ...+.|+.+++
T Consensus 33 ~d~~~C~~~~~-~~~ll~~~-~~~I~~i~~~g~~~~~--~------~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~ 102 (349)
T 3v64_C 33 PDRRSCKALGP-EPVLLFAN-RIDIRQVLPHRSEYTL--L------LNNLENAIALDFHHRRELVFWSDVTLDRILRANL 102 (349)
T ss_dssp TTSSCEEESSS-CCEEEEEC-BSCEEEECTTSCCEEE--E------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCccccccc-CceeEeec-ccceEEEeCCCCeeEE--e------ecCCCceEEEEEeccccEEEEEeccCCceEEEec
Confidence 34455666666 34555543 3447777765543211 1 1123457899999866666555 45788999998
Q ss_pred CCcceecccccCCccEEEEEecCCC-cEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEe
Q 022184 142 PSLRIILDEPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR 220 (301)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 220 (301)
..................+++.+.+ +++++-...+.|.+.++........+. ........+++.|.+..+| ++.
T Consensus 103 ~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~l~~P~~iavdp~~g~ly----~td 177 (349)
T 3v64_C 103 NGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIY----WTD 177 (349)
T ss_dssp TSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-TTCSCEEEEEEETTTTEEE----EEE
T ss_pred CCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-CCCCCcceEEEecCcCeEE----Eec
Confidence 7654332222223455788998754 455555567889999987554333332 2233578999999877643 333
Q ss_pred CCc-ceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCc
Q 022184 221 GDK-ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKM 276 (301)
Q Consensus 221 ~~~-~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~ 276 (301)
... +.|..+++............-.....++++|++..|+.+. ..+.|..+++...
T Consensus 178 ~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 178 WGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp CSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 334 7899999875433222222234578999999777666664 4578999998754
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.80 E-value=3.5e-05 Score=63.23 Aligned_cols=208 Identities=7% Similarity=-0.073 Sum_probs=126.9
Q ss_pred CCcceEEEECCCCCeEEEEe-cCCcEEEEEEcCCcc---ccccccccCCCCCCCCCeeEEEEeeCCCEE-EEeecCCeEE
Q 022184 63 EGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGAT---DINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLR 137 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~ 137 (301)
...+..++|++.+..|..+. ..+.|+.+++.+... ...+.. ........+++.+.+..| ++-...+.|.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~------~~~~~p~glavD~~~~~lY~~d~~~~~I~ 184 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------RDIQAPDGLAVDWIHSNIYWTDSVLGTVS 184 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC------SSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe------CCCCCcccEEEEecCCceEEEECCCCeEE
Confidence 45688999998766666554 457788888765321 111110 122456789998844444 4445678999
Q ss_pred EEeCCCcceecccccCCccEEEEEecCCCcEEEEEe-C-CCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 138 IMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS-T-DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 138 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
+.+++.......+.........++++|.+..|+... . .+.|...++........... .-.....+++++++..+|
T Consensus 185 ~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~-~l~~P~glavd~~~~~lY-- 261 (400)
T 3p5b_L 185 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLY-- 261 (400)
T ss_dssp EECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS-SCSCEEEEEEETTTTEEE--
T ss_pred EEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC-CCCceEEEEEEeCCCEEE--
Confidence 999875544333333334678999999666555544 2 36888888865444333332 223578999999888743
Q ss_pred EEEEeCCcceEEEEEccCceEeeeeec--cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 216 CTVQRGDKALLAVYDISTWNKIGHKRL--LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
++-.....|..+|+........... .-.....+++. .+.++.+-...+.|..++..+++.+..+
T Consensus 262 --~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 262 --WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp --EEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred --EEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 4456678999999875433222222 12345567763 3344455556678999997777655554
No 265
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.80 E-value=1.9e-06 Score=70.14 Aligned_cols=197 Identities=10% Similarity=0.066 Sum_probs=119.1
Q ss_pred CCeEEEEecCCcEEEEEEcCCccccccccccCCCCCC--CCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccccc
Q 022184 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQD--AGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK 152 (301)
Q Consensus 75 ~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 152 (301)
+..+++++.++.|..+|.++++..............+ ...+.. ....++..+++++.++.|..+|..+++.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5677778888889999998877644332211000000 122222 2223566788888899999999999987655543
Q ss_pred CCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCC----eeEEEEccCCCcceEEEEEEeCCcceEEE
Q 022184 153 AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEK----IELCRFSKDGTKPFLFCTVQRGDKALLAV 228 (301)
Q Consensus 153 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 228 (301)
........... +..++.++.++.+..+|.++++.+-......... ....... ++ . ++.+..++.|..
T Consensus 132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~-~-----v~~g~~~g~l~~ 202 (376)
T 3q7m_A 132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FG-A-----AVVGGDNGRVSA 202 (376)
T ss_dssp SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TT-E-----EEECCTTTEEEE
T ss_pred CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CC-E-----EEEEcCCCEEEE
Confidence 32211111222 4477778889999999999999887765432110 0111222 33 2 466777899999
Q ss_pred EEccCceEeeeeeccCCC----cE---EEEEcC--CCCEEEEeeCCCcEEEEeCCCceeecc
Q 022184 229 YDISTWNKIGHKRLLRKP----AS---VLSISL--DGKYLAMGSKDGDICVVDVKKMEINHW 281 (301)
Q Consensus 229 ~d~~~~~~~~~~~~~~~~----v~---~~~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~ 281 (301)
+|..+++.+-........ +. .+.-.| .+..+++++.++.+..+|..+++.+..
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~ 264 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWK 264 (376)
T ss_dssp EETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEE
T ss_pred EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEee
Confidence 999998876544322110 00 011111 245778888899999999999877644
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.78 E-value=2.5e-05 Score=61.94 Aligned_cols=187 Identities=9% Similarity=-0.054 Sum_probs=113.1
Q ss_pred eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeCCC----cceecccc
Q 022184 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPS----LRIILDEP 151 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~~~----~~~~~~~~ 151 (301)
+|+.+.. ..|+..++.+.+.... ......+..++|++++..|+.+ ..++.|..+++.. ......+.
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~--------~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSL--------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEE--------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred EEEEECC-CeEEEEECCCcceEeh--------hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe
Confidence 4555444 4488888876543211 1123467899999876656555 4568999999875 22111122
Q ss_pred cCCccEEEEEecCCC-cEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEE
Q 022184 152 KAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (301)
Q Consensus 152 ~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d 230 (301)
........+++.+.+ +++++-...+.|.++++........+. ........+++.|.+..+|+ +..+..+.|..++
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~P~~iavdp~~g~ly~---~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYW---TDWGTPAKIKKGG 149 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEE---EECSSSCEEEEEE
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE-CCCCCcceEEeCCCCCEEEE---EccCCCCeEEEEc
Confidence 222355788998754 455555667899999987554433333 22345789999998776432 2222237899888
Q ss_pred ccCceEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCc
Q 022184 231 ISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKM 276 (301)
Q Consensus 231 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~ 276 (301)
+............-.....++++|++..|+.+. ..+.|..+|+...
T Consensus 150 ~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 150 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 864332211222234678999999877776665 4578999998753
No 267
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.78 E-value=1.8e-05 Score=60.12 Aligned_cols=204 Identities=9% Similarity=0.023 Sum_probs=124.5
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 84 (301)
..+..++|.|+. ..+.++... .-+|+.++.....+.. ..+.+ ......+++.+++.++++.-.+
T Consensus 27 ~~lSGla~~~~~--~~L~aV~d~--------~~~I~~ld~~g~v~~~-----i~l~g-~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 27 NNISSLTWSAQS--NTLFSTINK--------PAAIVEMTTNGDLIRT-----IPLDF-VKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp SCEEEEEEETTT--TEEEEEEET--------TEEEEEEETTCCEEEE-----EECSS-CSSEEEEEECSTTEEEEEETTT
T ss_pred cCcceeEEeCCC--CEEEEEECC--------CCeEEEEeCCCCEEEE-----EecCC-CCChHHeEEeCCCEEEEEECCC
Confidence 458889999653 556666443 2267778777433321 12232 2568889999888776766567
Q ss_pred CcEEEEEEcCCcccccccccc--CCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCC---cceeccc-------cc
Q 022184 85 GGCKLFEVYGGATDINLLAKK--MPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS---LRIILDE-------PK 152 (301)
Q Consensus 85 ~~i~~w~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~---~~~~~~~-------~~ 152 (301)
+.+.++++............. ............++|+|+++.|+++.+.....+|.++. ...+... ..
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence 889999987654311111111 11223456689999999988888877765555655531 1111111 01
Q ss_pred CCccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEeecCC--------CCeeEEEEccCCCcceEEEEEEeCCc
Q 022184 153 AHKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSD--------EKIELCRFSKDGTKPFLFCTVQRGDK 223 (301)
Q Consensus 153 ~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~~~~~ 223 (301)
....+.+++++|... +++.......+.++|.. ++.+..+....+ .....++|.++|+. ...++.
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l------yIvsE~ 243 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI------YIVSEP 243 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCE------EEEETT
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCE------EEEcCC
Confidence 123578999999554 55566677789999975 556665543321 25789999999973 444566
Q ss_pred ceEEEEEc
Q 022184 224 ALLAVYDI 231 (301)
Q Consensus 224 ~~i~~~d~ 231 (301)
+.++.|..
T Consensus 244 n~~y~f~~ 251 (255)
T 3qqz_A 244 NRFYRFTP 251 (255)
T ss_dssp TEEEEEEC
T ss_pred ceEEEEEe
Confidence 66666653
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.77 E-value=4.7e-06 Score=69.08 Aligned_cols=202 Identities=7% Similarity=-0.023 Sum_probs=120.1
Q ss_pred CcceEEEECCC--CCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC-----eE
Q 022184 64 GDPMTIAVNPS--GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG-----HL 136 (301)
Q Consensus 64 ~~v~~~~~~~~--~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i 136 (301)
.....++|+|+ ...|..+...+.|+.++..++...... ........++++++|+ |+++...+ .+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~--------~~~~~P~giavd~dG~-lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT--------TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGI 209 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC--------CCCSCEEEEEECTTCC-EEEEECCSCTTSEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee--------cCCCCccEEEECCCCC-EEEEcCCCCcccceE
Confidence 35779999984 445666555478999988665542111 1234578999999999 54444321 23
Q ss_pred EEEeCCCcceecccccCCccEEEEEecC-CCcEEEEEeCCCcEEEEeCCCCceEEEE-eecCCCCeeEEEEccCCCcceE
Q 022184 137 RIMHWPSLRIILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFL-TRNSDEKIELCRFSKDGTKPFL 214 (301)
Q Consensus 137 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~ 214 (301)
...+...+...............++++| ++.++++-..++.|+.+|..++.....+ ..........++|+|+++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~L-- 287 (433)
T 4hw6_A 210 YLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWA-- 287 (433)
T ss_dssp EEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEE--
T ss_pred EEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEE--
Confidence 3333221111000111123456788999 6666666667788999999877663333 22222223579999999853
Q ss_pred EEEEEeCCcceEEEEEccC--ceE--eeeeecc---------------CCCcEEEEE---------cCCCCEEEEeeCCC
Q 022184 215 FCTVQRGDKALLAVYDIST--WNK--IGHKRLL---------------RKPASVLSI---------SLDGKYLAMGSKDG 266 (301)
Q Consensus 215 ~~~~~~~~~~~i~~~d~~~--~~~--~~~~~~~---------------~~~v~~~~~---------s~~~~~l~~~~~d~ 266 (301)
.++......|..++... +.. ...+... -.....+++ .++|.++++-...+
T Consensus 288 --Yvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~ 365 (433)
T 4hw6_A 288 --YIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH 365 (433)
T ss_dssp --EEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT
T ss_pred --EEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC
Confidence 34556678899988652 211 0111111 123567899 77777777666778
Q ss_pred cEEEEeCCCceee
Q 022184 267 DICVVDVKKMEIN 279 (301)
Q Consensus 267 ~i~i~~~~~~~~~ 279 (301)
+|+.++. ++...
T Consensus 366 ~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 366 TVRVLTP-EGRVT 377 (433)
T ss_dssp EEEEECT-TSEEE
T ss_pred EEEEECC-CCCEE
Confidence 8999985 55443
No 269
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.76 E-value=1.2e-06 Score=75.32 Aligned_cols=165 Identities=12% Similarity=0.039 Sum_probs=106.1
Q ss_pred EEEEeeCCCEEEEeecC----------------CeEEEEeCCCcceecccccCC----------ccEEEEEecCCCc---
Q 022184 117 CLSFSVDGSRFAAGGVD----------------GHLRIMHWPSLRIILDEPKAH----------KSVLDMDFSLDSE--- 167 (301)
Q Consensus 117 ~~~~s~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~----------~~i~~~~~~~~~~--- 167 (301)
.+++.++...++.+..+ +.|..+|.++++.+....... .++. +...++|+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 35667766667666532 359999999998866554221 1221 22334674
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEeecCC------------CCe--------------------------eEEEEccCC
Q 022184 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSD------------EKI--------------------------ELCRFSKDG 209 (301)
Q Consensus 168 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~~v--------------------------~~~~~~~~~ 209 (301)
.++.++.+|.+.++|.++++.+........ .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 577788999999999999998876653220 111 235778877
Q ss_pred CcceEEEEE------------------Ee--------------CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCC
Q 022184 210 TKPFLFCTV------------------QR--------------GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGK 257 (301)
Q Consensus 210 ~~~~~~~~~------------------~~--------------~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~ 257 (301)
..+|+...- .+ ..++.|..||..+++.+-..... ..+....+...+.
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg 476 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGG 476 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTT
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCC
Confidence 754432100 00 24689999999999877555432 2222222333466
Q ss_pred EEEEeeCCCcEEEEeCCCceeecccc
Q 022184 258 YLAMGSKDGDICVVDVKKMEINHWSK 283 (301)
Q Consensus 258 ~l~~~~~d~~i~i~~~~~~~~~~~~~ 283 (301)
.+++++.|+.|+.||.++++++..+.
T Consensus 477 ~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 477 LVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 78889999999999999999887664
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.75 E-value=1.4e-05 Score=63.42 Aligned_cols=206 Identities=8% Similarity=-0.076 Sum_probs=125.6
Q ss_pred cceEEEECCCCCeEEEE-ecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEE-EEeecCCeEEEEeCC
Q 022184 65 DPMTIAVNPSGDDFVCS-TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLRIMHWP 142 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~-~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~v~d~~ 142 (301)
.+..++|++.+..|..+ ...+.|+.+++.+.......... .......+++.+.+..| ++-...+.|.+++++
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~------~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d 109 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS------GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD 109 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE------CCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC------CCCCccEEEEEcCCCeEEEEECCCCEEEEEECC
Confidence 46789999866656544 45678888887765321111111 12345778998755444 444557889999986
Q ss_pred CcceecccccCCccEEEEEecCCCcEEEEEe--CCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEe
Q 022184 143 SLRIILDEPKAHKSVLDMDFSLDSEFLATTS--TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR 220 (301)
Q Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 220 (301)
.................+++.|.+..|+.+. ..+.|...++..... ..+....-.....++++|++..+| ++-
T Consensus 110 G~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~l~~Pnglavd~~~~~lY----~aD 184 (318)
T 3sov_A 110 GSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEEQKLY----WAD 184 (318)
T ss_dssp SCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEE----EEE
T ss_pred CCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEECCCCCccEEEEeccCCEEE----EEE
Confidence 5433222223335678999999665555554 357788888764333 333222223578999999887643 455
Q ss_pred CCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 221 GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 221 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
...+.|..+|+..................+++..+ .++.+-...+.|..++..+++....+
T Consensus 185 ~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 185 AKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEEECCCCCceEEE
Confidence 67789999998753322222223345677777533 44445456678999998777654443
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.75 E-value=6.8e-06 Score=67.12 Aligned_cols=196 Identities=9% Similarity=-0.064 Sum_probs=119.4
Q ss_pred ceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeCCCc
Q 022184 66 PMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSL 144 (301)
Q Consensus 66 v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~ 144 (301)
-.+.+..+ ..+|+.+.. ..|+.+++.+...... ......+..++|++.+..|+.. ...+.|+.+++...
T Consensus 79 ~~C~~~~~-~~~l~~~~~-~~I~~i~~~~~~~~~~--------~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 79 RSCKALGP-EPVLLFANR-IDIRQVLPHRSEYTLL--------LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp SCEEECSS-CCEEEEECB-SCEEEECTTSCCCEEE--------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CeECCccc-cceeEeecC-ccceeeccCCCcEEEE--------ecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 34555545 335555433 4577777765433111 1123457899999865555544 45788999998765
Q ss_pred ceecccccCCccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCc
Q 022184 145 RIILDEPKAHKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (301)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 223 (301)
...............+++.+.+. ++++-...+.|.+.++........+. ........+++.|.+..+| ++....
T Consensus 149 ~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~l~~P~giavdp~~g~ly----~td~~~ 223 (386)
T 3v65_B 149 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIY----WTDWGN 223 (386)
T ss_dssp CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-SSCSCEEEEEEETTTTEEE----EEECSS
T ss_pred CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-CCCCCCcEEEEEcCCCeEE----EeccCC
Confidence 43322222223456788887544 45555566789999887554333333 2223578999999887643 233333
Q ss_pred -ceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCc
Q 022184 224 -ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKM 276 (301)
Q Consensus 224 -~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~ 276 (301)
+.|..+++............-.....++++|++..|+.+. ..+.|..+++...
T Consensus 224 ~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 224 TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 7899999875433222222234578999998776666664 4578999998754
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.70 E-value=1.4e-06 Score=75.04 Aligned_cols=165 Identities=14% Similarity=0.086 Sum_probs=105.4
Q ss_pred EEEEeeCCCEEEEeec--------------------C----CeEEEEeCCCcceecccccC-C---------ccEEEEEe
Q 022184 117 CLSFSVDGSRFAAGGV--------------------D----GHLRIMHWPSLRIILDEPKA-H---------KSVLDMDF 162 (301)
Q Consensus 117 ~~~~s~~~~~l~~~~~--------------------d----g~i~v~d~~~~~~~~~~~~~-~---------~~i~~~~~ 162 (301)
.++++|+..+++.+.. | +.|..+|.++++.+..+... + .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4577777777776653 2 58999999999987665321 1 1221 222
Q ss_pred c-CCCc---EEEEEeCCCcEEEEeCCCCceEEEEeecCC------------CCe--------------------------
Q 022184 163 S-LDSE---FLATTSTDGSARIWKTEDGVAWTFLTRNSD------------EKI-------------------------- 200 (301)
Q Consensus 163 ~-~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~~v-------------------------- 200 (301)
. .+|+ .++.++.+|.++++|.++++.+........ .++
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 2 4674 688899999999999999998876653320 000
Q ss_pred ------eEEEEccCCCcceEEEEE----------------------------EeCCcceEEEEEccCceEeeeeeccCCC
Q 022184 201 ------ELCRFSKDGTKPFLFCTV----------------------------QRGDKALLAVYDISTWNKIGHKRLLRKP 246 (301)
Q Consensus 201 ------~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 246 (301)
..++++|+...+|+...- ....++.|..||+.+++.+-+..... +
T Consensus 409 ~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~ 487 (582)
T 1flg_A 409 LGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-P 487 (582)
T ss_dssp TCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-C
T ss_pred ccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-C
Confidence 134566665543321100 01236889999999998765544322 2
Q ss_pred cEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccc
Q 022184 247 ASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK 283 (301)
Q Consensus 247 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 283 (301)
...-.....+.++++++.|+.++.||.++++++..+.
T Consensus 488 ~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 488 LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 2211222246678889999999999999999887764
No 273
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=0.00015 Score=64.92 Aligned_cols=226 Identities=11% Similarity=0.038 Sum_probs=136.7
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccc---cCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEE
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAK---KMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~ 139 (301)
...|.++...++|. |-.|+.++-|..++............. ....+ ....|.++...++|+ |..|+.++-|..|
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~v~~i~~d~~g~-lWigt~~~Gl~~~ 388 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSL-SNKVVSSVCDDGQGK-LWIGTDGGGINVF 388 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCC-SSSCEEEEEECTTSC-EEEEEBSSCEEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCC-CCcceEEEEEcCCCC-EEEEeCCCcEEEE
Confidence 56799999998886 555665555888887654321111000 00111 235688888887776 5566656668889
Q ss_pred eCCCcceeccc---ccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee--cCCCCeeEEEEccCCCcceE
Q 022184 140 HWPSLRIILDE---PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR--NSDEKIELCRFSKDGTKPFL 214 (301)
Q Consensus 140 d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~ 214 (301)
+..++....-. ......|.++...+++.+.+ ++.++-+..+|.++++... +.. .....|.++...+++..
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~v~~i~~d~~g~l--- 463 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI-IELEKNELLDVRVFYEDKNKKI--- 463 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE-CCSTTTCCCCEEEEEECTTSEE---
T ss_pred ECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE-eccCCCCCCeEEEEEECCCCCE---
Confidence 97665432211 11235789998888776544 6666778899987765432 221 12346888888888873
Q ss_pred EEEEEeCCcceEEEEEccCceEeeeeecc-----CCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccc-ccccC
Q 022184 215 FCTVQRGDKALLAVYDISTWNKIGHKRLL-----RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK-RLHLG 288 (301)
Q Consensus 215 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~ 288 (301)
..++. +-|..||..+++........ ...|.++...++|++.+. +.++-|..|+..+++...... .+-..
T Consensus 464 ---wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~l~~ 538 (781)
T 3v9f_A 464 ---WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEGFCS 538 (781)
T ss_dssp ---EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEECTTTTCSC
T ss_pred ---EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCCCCC
Confidence 44444 45889998775543222111 356889999998875554 443448889987765443221 11114
Q ss_pred ccEEEEEEccCCC
Q 022184 289 TSIALVEFCPTQR 301 (301)
Q Consensus 289 ~~v~~~~~spdg~ 301 (301)
..|.++...++|+
T Consensus 539 ~~i~~i~~d~~g~ 551 (781)
T 3v9f_A 539 NTINQIYRSSKGQ 551 (781)
T ss_dssp SCEEEEEECTTSC
T ss_pred CeeEEEEECCCCC
Confidence 5688888777764
No 274
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.66 E-value=0.00012 Score=65.51 Aligned_cols=226 Identities=12% Similarity=0.010 Sum_probs=134.3
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~ 142 (301)
...|.++...++|...+. +.+| +.+||..+....................|.++...++|. |..|+..+-|.++|..
T Consensus 210 ~~~i~~i~~d~~g~lwig-t~~G-l~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIWIG-TSKG-LALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp CSSEEEEEECTTCCEEEE-ETTE-EEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred CCceeEEEEcCCCCEEEE-eCCc-HheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 356899999888875554 4454 888987655432111000000011235688888887775 5556664568888876
Q ss_pred Ccceecccc--------------cCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee--------cCCCCe
Q 022184 143 SLRIILDEP--------------KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR--------NSDEKI 200 (301)
Q Consensus 143 ~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~~v 200 (301)
+.+...... -....|.++...++|. |-.|+.++-|..++............ -....|
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 654321110 1234789999988886 55566677788898876543322110 012358
Q ss_pred eEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeee---eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCce
Q 022184 201 ELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK---RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME 277 (301)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~ 277 (301)
.++...++|. +..++.++-|..||..++...... ......|.++...+++++.+ |+.++-|..++..+++
T Consensus 366 ~~i~~d~~g~------lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 366 SSVCDDGQGK------LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK 438 (781)
T ss_dssp EEEEECTTSC------EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE
T ss_pred EEEEEcCCCC------EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc
Confidence 8888888887 455665566889998765432211 12235688888888876544 6666679999988776
Q ss_pred eecccc-ccccCccEEEEEEccCC
Q 022184 278 INHWSK-RLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 278 ~~~~~~-~~~~~~~v~~~~~spdg 300 (301)
...... ... ...|.++...++|
T Consensus 439 ~~~~~~~~~~-~~~v~~i~~d~~g 461 (781)
T 3v9f_A 439 FQIIELEKNE-LLDVRVFYEDKNK 461 (781)
T ss_dssp EEECCSTTTC-CCCEEEEEECTTS
T ss_pred EEEeccCCCC-CCeEEEEEECCCC
Confidence 543321 112 4568888777665
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.62 E-value=5.5e-05 Score=62.05 Aligned_cols=188 Identities=10% Similarity=-0.030 Sum_probs=117.1
Q ss_pred eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-cCCeEEEEeCCCcc----eecccc
Q 022184 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLR----IILDEP 151 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~----~~~~~~ 151 (301)
+|+.+. ...|+..++........ ......+..++|++....|+.+. ..+.|+.+++.... ......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~--------~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSL--------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEE--------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred eeEEec-cceeEEEccCCcceeEe--------ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence 555543 45688888765543111 12335678999998666665554 56889988886521 222222
Q ss_pred cCCccEEEEEecC-CCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEE
Q 022184 152 KAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (301)
Q Consensus 152 ~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d 230 (301)
........+++.+ .++++++-...+.|.+.++........+.. .......+++.|.+..+|. .-.+..+.|...+
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~ly~---td~~~~~~I~~~~ 231 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYW---TDWGTPAKIKKGG 231 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-SSCCEEEEEEETTTTEEEE---EECSSSCCEEEEE
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-CCCCcceEEEecccCeEEE---EeCCCCCEEEEEe
Confidence 2334678899988 455555555678899999876554444432 2334789999998776432 2223347899999
Q ss_pred ccCceEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCce
Q 022184 231 ISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKME 277 (301)
Q Consensus 231 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~ 277 (301)
+............-.....|++++++..|+.+. ..+.|..+|+....
T Consensus 232 ~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 232 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred CCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 875433322222235678999999877777764 45789999987543
No 276
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.60 E-value=1.3e-06 Score=76.92 Aligned_cols=207 Identities=7% Similarity=-0.089 Sum_probs=121.8
Q ss_pred CcceEEEECCCCCeEEEEe-cCCcEEEEEEcCC---ccccccccccCCCCCCCCCeeEEEEeeCCCEE-EEeecCCeEEE
Q 022184 64 GDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGG---ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLRI 138 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~v 138 (301)
..+..++|++.+..|+.+. ..+.|+.+++.+. .....+. .........+++.+.+..| ++-...+.|.+
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i------~~~~~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC------CSCC--CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE------eCCCCCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 4567899998777776654 4578888888752 1101100 0111234568888644444 44455688999
Q ss_pred EeCCCcceecccccCCccEEEEEecCCCcEEEEEeC-C-CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEE
Q 022184 139 MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST-D-GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFC 216 (301)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 216 (301)
+++........+.........++++|.+.+|+.+.. . +.|..+++.... ...+....-.....|+|+|++..+|
T Consensus 480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY--- 555 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLY--- 555 (699)
T ss_dssp EBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEE---
T ss_pred EecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEE---
Confidence 998755433222222345678899997665554442 2 678888775433 2223222223467899999887643
Q ss_pred EEEeCCcceEEEEEccCceEeeeee--ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 217 TVQRGDKALLAVYDISTWNKIGHKR--LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 217 ~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
++-...+.|..+|+.......... ........+++..+ .++++....+.|..++..+++.+..+
T Consensus 556 -~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 556 -WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp -EEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred -EEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 445667889999987533222221 11123445666554 44445556689999999888776655
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.59 E-value=0.00011 Score=60.93 Aligned_cols=215 Identities=9% Similarity=-0.028 Sum_probs=118.7
Q ss_pred eEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC----c-EEEEEEcCCccccccccccCCCCCCC
Q 022184 38 EIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG----G-CKLFEVYGGATDINLLAKKMPPLQDA 112 (301)
Q Consensus 38 ~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~----~-i~~w~~~~~~~~~~~~~~~~~~~~~~ 112 (301)
+|+.+++....+.. +......+..++++++|+ |+.+...+ . +...+.......... +...
T Consensus 163 ~I~~id~~~g~v~~-------~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~-------~~~~ 227 (433)
T 4hw6_A 163 AFRHVDFVNQYVDI-------KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLS-------LCNA 227 (433)
T ss_dssp CEEEEETTTTEEEE-------ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEE-------EEEC
T ss_pred CEEEEECCCCEEEE-------eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccc-------cccc
Confidence 56666664443321 112345688999999999 55444321 1 222222111110000 0112
Q ss_pred CCeeEEEEee-CCCEEEEeecCCeEEEEeCCCcceeccccc--CCccEEEEEecCCCcEEEE-EeCCCcEEEEeCC--CC
Q 022184 113 GPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLRIILDEPK--AHKSVLDMDFSLDSEFLAT-TSTDGSARIWKTE--DG 186 (301)
Q Consensus 113 ~~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~--~~ 186 (301)
.....++++| ++.+.++-..++.|+.+|..++.....+.. ....-..++|+|+++.|+. -...+.|+.++.. ++
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~ 307 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG 307 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence 3456788999 666555555678899999876654222211 1122346999999985544 4456789998765 23
Q ss_pred ce--EEEEeecC--------------CCCeeEEEE---------ccCCCcceEEEEEEeCCcceEEEEEccCceEeeeee
Q 022184 187 VA--WTFLTRNS--------------DEKIELCRF---------SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (301)
Q Consensus 187 ~~--~~~~~~~~--------------~~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 241 (301)
.. ...+.... -.....+++ .+++.. .++-.....|+.++. ++... .+.
T Consensus 308 ~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l-----yvaD~~n~~I~~~~~-~G~v~-t~~ 380 (433)
T 4hw6_A 308 KLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF-----YFCDRDSHTVRVLTP-EGRVT-TYA 380 (433)
T ss_dssp CBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE-----EEEETTTTEEEEECT-TSEEE-EEE
T ss_pred ccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE-----EEEECCCCEEEEECC-CCCEE-EEE
Confidence 21 12222210 113567888 566653 355666788999885 44332 222
Q ss_pred cc------------------CCCcEEEEEc-CCCCEEEEeeCCCcEEEEeCC
Q 022184 242 LL------------------RKPASVLSIS-LDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 242 ~~------------------~~~v~~~~~s-~~~~~l~~~~~d~~i~i~~~~ 274 (301)
+. -.....++++ ++|.++++=..+++|+.++++
T Consensus 381 G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 381 GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 11 1236788999 566655555566778887764
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.58 E-value=7.2e-06 Score=70.64 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=105.8
Q ss_pred EEEEeeCCCEEEEeecC----------------CeEEEEeCCCcceecccccCCc----------cEEEEEec-CCC---
Q 022184 117 CLSFSVDGSRFAAGGVD----------------GHLRIMHWPSLRIILDEPKAHK----------SVLDMDFS-LDS--- 166 (301)
Q Consensus 117 ~~~~s~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~~----------~i~~~~~~-~~~--- 166 (301)
.+++.++..+++.+..+ +.|..+|.++++.+..+...+. ++. +... .+|
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 45666777777777654 3799999999988765543221 221 2222 467
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEeecC------------CCCe--------------------------eEEEEccC
Q 022184 167 EFLATTSTDGSARIWKTEDGVAWTFLTRNS------------DEKI--------------------------ELCRFSKD 208 (301)
Q Consensus 167 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------~~~v--------------------------~~~~~~~~ 208 (301)
+.++.++.+|.+.++|.++++.+....... ..++ ..++++|+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCC
Confidence 467778899999999999999887664221 1111 24567777
Q ss_pred CCcceEEE--------------------------EEE--eC------CcceEEEEEccCceEeeeeeccCCCcEEEEEcC
Q 022184 209 GTKPFLFC--------------------------TVQ--RG------DKALLAVYDISTWNKIGHKRLLRKPASVLSISL 254 (301)
Q Consensus 209 ~~~~~~~~--------------------------~~~--~~------~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~ 254 (301)
...+|+.. +.. .+ ..+.|..||+.+++.+-..... .+...-.+..
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~t 482 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMAT 482 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEE
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEe
Confidence 66533211 011 01 4588999999999876544322 2221111223
Q ss_pred CCCEEEEeeCCCcEEEEeCCCceeecccc
Q 022184 255 DGKYLAMGSKDGDICVVDVKKMEINHWSK 283 (301)
Q Consensus 255 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 283 (301)
.+.+++.++.|+.++.||.++++++..+.
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEee
Confidence 56678889999999999999999887664
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.54 E-value=0.00028 Score=62.80 Aligned_cols=207 Identities=6% Similarity=-0.112 Sum_probs=123.7
Q ss_pred CCcceEEEECCCCCeEEEEe-cCCcEEEEEEcCCcc---ccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEE
Q 022184 63 EGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGAT---DINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLR 137 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~ 137 (301)
...+..++|++....|+.+. ..+.|+.+++..... ...+.. ........|++.+.++.|+.+ ...+.|.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~------~~l~~P~GLAvD~~~~~LY~tD~~~~~I~ 496 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------RDIQAPDGLAVDWIHSNIYWTDSVLGTVS 496 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC------SSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe------cCCCCcceeeeeecCCcEEEEecCCCeEE
Confidence 45678999998666555444 457788888765321 011110 022456789998877555554 4578999
Q ss_pred EEeCCCcceecccccCCccEEEEEecCCCcEEEEEe-CC-CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 138 IMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS-TD-GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 138 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
+.++........+.........|+++|.+.+|+... .. +.|...++..... ..+....-.....|++.+.+..+|
T Consensus 497 v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~P~GLavD~~~~~LY-- 573 (791)
T 3m0c_C 497 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLY-- 573 (791)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEE--
T ss_pred EEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCCceEEEEecCCCeEE--
Confidence 999875443222223334688999999765555544 22 6788888865444 333322334588999998887643
Q ss_pred EEEEeCCcceEEEEEccCceEeeeeecc--CCCcEEEEEcCCCCEEEEe-eCCCcEEEEeCCCceeeccc
Q 022184 216 CTVQRGDKALLAVYDISTWNKIGHKRLL--RKPASVLSISLDGKYLAMG-SKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 216 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~ 282 (301)
++-.....|..+|+............ -.....|++. +..|+.+ ...+.|...+..+++.+..+
T Consensus 574 --waD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 574 --WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp --EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred --EEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 34456678999998754433223221 1234556664 3355555 45578888887777554443
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.52 E-value=3.7e-05 Score=60.80 Aligned_cols=191 Identities=14% Similarity=0.192 Sum_probs=117.5
Q ss_pred CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC----CCE--EEEee-c---CCeEEEEeCC-
Q 022184 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD----GSR--FAAGG-V---DGHLRIMHWP- 142 (301)
Q Consensus 74 ~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~--l~~~~-~---dg~i~v~d~~- 142 (301)
....++.....+-+.+||+. ++....+ . .+.++.+..-|+ |+. ++.++ . +++|.+|++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-G~~l~~~--------~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp 108 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-GKMLHSY--------N-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG 108 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-SCEEEEE--------C-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT
T ss_pred CccEEEEEcCCCCEEEEcCC-CcEEEEc--------c-CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC
Confidence 33456666677789999994 4432221 1 145666666663 322 33333 3 4789999773
Q ss_pred -Ccceeccccc------CC-ccEEEEEe--cCC-Cc-EEEEEeCCCcEEEEeCC-------CCceEEEEeecCCCCeeEE
Q 022184 143 -SLRIILDEPK------AH-KSVLDMDF--SLD-SE-FLATTSTDGSARIWKTE-------DGVAWTFLTRNSDEKIELC 203 (301)
Q Consensus 143 -~~~~~~~~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~~v~~~ 203 (301)
+++ +..+.. .. ..+..+++ +|. ++ ++++...+|.+..|++. +.+.++.+... ..+..|
T Consensus 109 ~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--sq~Egc 185 (355)
T 3amr_A 109 KNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--SQTEGM 185 (355)
T ss_dssp TTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS--SCEEEE
T ss_pred CCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC--CCcceE
Confidence 332 333311 11 45677888 674 44 67778888999999883 33556666644 358899
Q ss_pred EEccCCCcceEEEEEEeCCcceEEEEEcc-----CceEeeeee--ccCCCcEEEEE--cCCCC-EEEEee-CCCcEEEEe
Q 022184 204 RFSKDGTKPFLFCTVQRGDKALLAVYDIS-----TWNKIGHKR--LLRKPASVLSI--SLDGK-YLAMGS-KDGDICVVD 272 (301)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-----~~~~~~~~~--~~~~~v~~~~~--s~~~~-~l~~~~-~d~~i~i~~ 272 (301)
...+.... ++.+.++.-|..||.+ +.+.+.... .....+..|++ .++++ +|++++ .++.+.+||
T Consensus 186 vvDd~~g~-----Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 186 AADDEYGR-----LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EEETTTTE-----EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred EEcCCCCe-----EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 99988776 5666777667777755 334443332 12246788888 45565 677666 567899999
Q ss_pred CC-Cceeeccc
Q 022184 273 VK-KMEINHWS 282 (301)
Q Consensus 273 ~~-~~~~~~~~ 282 (301)
.+ +.+.+..+
T Consensus 261 r~~~~~~vg~f 271 (355)
T 3amr_A 261 RQGKNKYVADF 271 (355)
T ss_dssp SSTTCCEEEEE
T ss_pred CCCCCcEEEEE
Confidence 97 55555444
No 281
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.51 E-value=3.5e-06 Score=73.92 Aligned_cols=198 Identities=10% Similarity=0.069 Sum_probs=119.6
Q ss_pred CCeEEEEecCCcEEEEEEcCCccccccccccCCCC--CCC-CCe-eEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccc
Q 022184 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPL--QDA-GPQ-KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150 (301)
Q Consensus 75 ~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~--~~~-~~v-~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 150 (301)
+..+++++.++.|.-+|..+++...+......... ... ..+ ..+.+ .+..+++++.|+.|..+|..+|+.+.+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 45666667778888888877776544322110000 000 000 11222 3557888888999999999999987665
Q ss_pred ccCCc-cEEEEEecC---CCcEEEEEeC------CCcEEEEeCCCCceEEEEeecCCC----------------------
Q 022184 151 PKAHK-SVLDMDFSL---DSEFLATTST------DGSARIWKTEDGVAWTFLTRNSDE---------------------- 198 (301)
Q Consensus 151 ~~~~~-~i~~~~~~~---~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~---------------------- 198 (301)
..... ....+.-.| ++ .++.+.. ++.|..+|.++|+.+-.+......
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred ccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 43210 000111111 34 4444432 589999999999998777531100
Q ss_pred --------CeeEEEEccCCCcceEEEEEEeCCcc-------------------eEEEEEccCceEeeeeecc--C-----
Q 022184 199 --------KIELCRFSKDGTKPFLFCTVQRGDKA-------------------LLAVYDISTWNKIGHKRLL--R----- 244 (301)
Q Consensus 199 --------~v~~~~~~~~~~~~~~~~~~~~~~~~-------------------~i~~~d~~~~~~~~~~~~~--~----- 244 (301)
....+++.|+... ++.+..++ .|..+|.++++.+-.+... .
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~-----vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDL-----LYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTE-----EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred eeeCCCCccccceEEcCCCCE-----EEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 0124678887775 33344443 4999999999887555432 1
Q ss_pred --CCcEEEEEcCCCC---EEEEeeCCCcEEEEeCCCceeec
Q 022184 245 --KPASVLSISLDGK---YLAMGSKDGDICVVDVKKMEINH 280 (301)
Q Consensus 245 --~~v~~~~~s~~~~---~l~~~~~d~~i~i~~~~~~~~~~ 280 (301)
.+.....+..+|+ .++.++.+|.++++|..+++++.
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEec
Confidence 2222223334665 78999999999999999998873
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.48 E-value=1.2e-05 Score=70.51 Aligned_cols=224 Identities=11% Similarity=0.051 Sum_probs=117.9
Q ss_pred ccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEe-cC-----CcEEEEEE
Q 022184 19 VNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST-TN-----GGCKLFEV 92 (301)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d-----~~i~~w~~ 92 (301)
+.++++|+... + .++.||+....+...+. +.. ...-.+++..++++.++.|+ .+ ..+.+||.
T Consensus 254 g~lyv~GG~~~-----~--~v~~yd~~t~~W~~~~~----~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 254 GQIVVTGGNDA-----K--KTSLYDSSSDSWIPGPD----MQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp SCEEEECSSST-----T--CEEEEEGGGTEEEECCC----CSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred CCEEEeCCCCC-----C--ceEEecCcCCceeECCC----CCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 45667766422 2 46666666666544321 111 11123456667899888888 34 56899998
Q ss_pred cCCcccccccc--ccCCCCCCCCCeeEEEEeeCCCEEEEeecC---------CeEEEEeCCCcceecccccCC-------
Q 022184 93 YGGATDINLLA--KKMPPLQDAGPQKCLSFSVDGSRFAAGGVD---------GHLRIMHWPSLRIILDEPKAH------- 154 (301)
Q Consensus 93 ~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------g~i~v~d~~~~~~~~~~~~~~------- 154 (301)
.+..-...... .......+. ..+..++..++.++.+ ..+..||..+...........
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~-----~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 396 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQ-----GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP 396 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTT-----GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECC
T ss_pred CCCcceeCCCcccccccccccc-----ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCC
Confidence 76543211000 000000000 1122344444444433 456788877654322111111
Q ss_pred --ccEEEEEecC-CCcEEEEEeCCC-----------cEEEEeCCCCceEEEE--eecCCCCeeEEEEccCCCcceEEEEE
Q 022184 155 --KSVLDMDFSL-DSEFLATTSTDG-----------SARIWKTEDGVAWTFL--TRNSDEKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 155 --~~i~~~~~~~-~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (301)
..-.++.+.. ++++++.|+.++ .+.+||..+....... ..+....-.++...|+++. ++
T Consensus 397 ~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i-----~v 471 (656)
T 1k3i_A 397 DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGST-----FI 471 (656)
T ss_dssp CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCE-----EE
T ss_pred CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCE-----EE
Confidence 1223444443 778888887543 6788888776654432 2222222345567788875 44
Q ss_pred EeCCc-----------ceEEEEEccCceEe--eeeeccCCCcEEEEEcCCCCEEEEeeC
Q 022184 219 QRGDK-----------ALLAVYDISTWNKI--GHKRLLRKPASVLSISLDGKYLAMGSK 264 (301)
Q Consensus 219 ~~~~~-----------~~i~~~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~ 264 (301)
.++.+ ..+.+||..+.+-. ..............+.|+++.++.|+.
T Consensus 472 ~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 472 TGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp ECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 55532 56899998775532 222222333445667799999999985
No 283
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.48 E-value=0.00012 Score=57.48 Aligned_cols=211 Identities=10% Similarity=0.027 Sum_probs=126.3
Q ss_pred ccccCCcceEEEECCCCCeEEEEe-cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEE---eeCCCEEEEeec--
Q 022184 59 FDESEGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF---SVDGSRFAAGGV-- 132 (301)
Q Consensus 59 ~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~-- 132 (301)
+....-...+++|++....|..++ ..++|..|+...+...................+..+.| .|+++++++...
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 444455677899988666666665 68999999987543211111000000111124589999 688777765431
Q ss_pred -----------CCeEEEEeCC---Ccceecccc--c-----------CCccEEEEEecCCCcEEEEEeCC-CcEEEEeCC
Q 022184 133 -----------DGHLRIMHWP---SLRIILDEP--K-----------AHKSVLDMDFSLDSEFLATTSTD-GSARIWKTE 184 (301)
Q Consensus 133 -----------dg~i~v~d~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~d-~~i~i~d~~ 184 (301)
+..|..||+. +++.+.... . .......++..++|+..++++.. +.|...+..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 5779999998 776543221 1 11358899999999999999888 888888765
Q ss_pred CCceEEEEeecC-----CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE--eeeee-cc---CCCcEEE-EE
Q 022184 185 DGVAWTFLTRNS-----DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK--IGHKR-LL---RKPASVL-SI 252 (301)
Q Consensus 185 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~-~~---~~~v~~~-~~ 252 (301)
.. .+..+.... ....+.+++.|+|.. ++.....+.|..+|+.+... +.... +. -.....+ .-
T Consensus 168 G~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~-----Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~ 241 (334)
T 2p9w_A 168 GK-TVSTFAWESGNGGQRPGYSGITFDPHSNK-----LIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTV 241 (334)
T ss_dssp SC-CEEEEEECCCCSSSCCSCSEEEEETTTTE-----EEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEE
T ss_pred CC-EEeeeeecCCCcccccCcceEEEeCCCCE-----EEEEcCCCeEEEEcCCCCcceeecccccCCcccccCccccccc
Confidence 44 333332111 112679999999987 34444499999999885322 11110 11 1223443 33
Q ss_pred cCCCCE-EEEeeCCCcEEEEeCCC
Q 022184 253 SLDGKY-LAMGSKDGDICVVDVKK 275 (301)
Q Consensus 253 s~~~~~-l~~~~~d~~i~i~~~~~ 275 (301)
-.+|+. +++....+.+.+.+.+.
T Consensus 242 ~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 242 PVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EETTEEEEEEEETTEEEEEECSST
T ss_pred ccCCEEEEEEcCCCCEEEEECCCC
Confidence 346777 44445566666666554
No 284
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.45 E-value=6.6e-05 Score=60.43 Aligned_cols=225 Identities=13% Similarity=0.081 Sum_probs=116.9
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC---CCEEEEeec-C-----C
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGGV-D-----G 134 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~-d-----g 134 (301)
.....++|.|+|+.++ +..++.|++++ .+... ... ..............++|+|+ +..|+++.. . +
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~-~~~-~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLS-TYA-ELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEE-EEE-ECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCcc-Eee-cceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 3577999999998554 45678898888 33321 111 10111123457899999998 555555543 2 6
Q ss_pred eEEEEeCCCc-----ceecc-cc---cCCccEEEEEecCCCcEEEEEeCC-------------CcEEEEeCCCC------
Q 022184 135 HLRIMHWPSL-----RIILD-EP---KAHKSVLDMDFSLDSEFLATTSTD-------------GSARIWKTEDG------ 186 (301)
Q Consensus 135 ~i~v~d~~~~-----~~~~~-~~---~~~~~i~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~------ 186 (301)
.|..++...+ +.+.. +. ........++|.|||.++++.+.. +.|.-++....
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 7878877643 11111 22 111133689999999766664321 44555554320
Q ss_pred ------ceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcc-------eEEEEEccC--------c--------eEe
Q 022184 187 ------VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA-------LLAVYDIST--------W--------NKI 237 (301)
Q Consensus 187 ------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-------~i~~~d~~~--------~--------~~~ 237 (301)
.....+..... ....++|+|+...+|+ .-.+.+. .|.+..... + .++
T Consensus 186 f~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v---~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFS---SEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp TTTCTTSCTTEEEECCS-EECCCEECTTTCCEEE---EEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred ccCCCCCCccEEEEcCC-CcccEEEECCCCCEEE---EEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence 11112222222 2678899994333232 2223232 243332111 0 011
Q ss_pred eeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCcee------eccccccccCccEEEEEEccCCC
Q 022184 238 GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI------NHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 238 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~------~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
..+ .+......++| .+|.++++.-..+.|...+++.... ...+. .. ...+..+++.|||.
T Consensus 262 ~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~-~~rp~~v~~~pdG~ 327 (352)
T 2ism_A 262 YFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SG-FGRLREVQVGPDGA 327 (352)
T ss_dssp EEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ES-SCCEEEEEECTTSC
T ss_pred Eec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec-cc-CCCeeEEEECCCCc
Confidence 111 11224566777 4666666655667788877764321 11111 12 35789999999984
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=1.8e-05 Score=65.52 Aligned_cols=152 Identities=13% Similarity=0.077 Sum_probs=97.3
Q ss_pred CeeEEEEee-CCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeC-CC----cEEEEeCCCCc
Q 022184 114 PQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST-DG----SARIWKTEDGV 187 (301)
Q Consensus 114 ~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~----~i~i~d~~~~~ 187 (301)
....++++| ++..|+++...+.|+.+|+..+... .+.........++|++++++|+.+.. ++ .+..++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 457899997 4556766665588999998776543 33334456889999999996655553 22 2333443 332
Q ss_pred eE--EEEeecCCCCeeEEEEcc-CCCcceEEEEEEeCCcceEEEEEccCceEeeeeec-cCCCcEEEEEcCCCCEEEEe-
Q 022184 188 AW--TFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL-LRKPASVLSISLDGKYLAMG- 262 (301)
Q Consensus 188 ~~--~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~- 262 (301)
.. ..+.. ......++++| ++.. .++...++.|..+|...+........ .......++|+|+|++|+.+
T Consensus 216 ~~~~~~l~~--~~~p~giavdp~~g~l-----yv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 216 FKVITELTK--GQNCNGAETHPINGEL-----YFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp SCSEEEEEE--CSSCCCEEECTTTCCE-----EEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred eeeeeeecc--CCCceEEEEeCCCCEE-----EEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 21 22322 12367889999 5553 34555678999999987654222222 12356889999999966555
Q ss_pred eCCCcEEEEeCC
Q 022184 263 SKDGDICVVDVK 274 (301)
Q Consensus 263 ~~d~~i~i~~~~ 274 (301)
...+.|..++..
T Consensus 289 ~~~~~I~~~~~d 300 (430)
T 3tc9_A 289 VNQHYILRSDYD 300 (430)
T ss_dssp TTTTEEEEEEEE
T ss_pred CCCCEEEEEeCC
Confidence 456789988765
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.41 E-value=0.0004 Score=55.26 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=131.4
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 83 (301)
...+.++.+.++ ...+++|.. + .++.....+..+..... ........+.++.|++ +. +..++.
T Consensus 35 ~~~~~~v~~~~~---~~~~~~G~~-------g--~i~~s~DgG~tW~~~~~---~~~~~~~~~~~i~~~~-~~-~~~~g~ 97 (327)
T 2xbg_A 35 TATILDMSFIDR---HHGWLVGVN-------A--TLMETRDGGQTWEPRTL---VLDHSDYRFNSVSFQG-NE-GWIVGE 97 (327)
T ss_dssp SSCEEEEEESSS---SCEEEEETT-------T--EEEEESSTTSSCEECCC---CCSCCCCEEEEEEEET-TE-EEEEEE
T ss_pred CCcEEEEEECCC---CcEEEEcCC-------C--eEEEeCCCCCCCeECCC---CCCCCCccEEEEEecC-Ce-EEEEEC
Confidence 456788887644 345555432 2 24444333333322110 0112244688899976 44 444455
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceeccc-ccCCccEEEEEe
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE-PKAHKSVLDMDF 162 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~i~~~~~ 162 (301)
++. ++....+........ ........+..+.+.+++..++.+ .++.|..- .+.++.-... ......+..+++
T Consensus 98 ~g~--i~~S~DgG~tW~~~~---~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~ 170 (327)
T 2xbg_A 98 PPI--MLHTTDGGQSWSQIP---LDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNR 170 (327)
T ss_dssp TTE--EEEESSTTSSCEECC---CCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEE
T ss_pred CCe--EEEECCCCCCceECc---cccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEE
Confidence 663 344433322222111 100122446778887777666555 45544321 1223221111 223457889999
Q ss_pred cCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 163 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
.|++.+++.+...+..+-.|- .++.-..+.......+..+.+.+++.. ...+.++.+.+.+...++.-.....
T Consensus 171 ~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~------~~~~~~G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 171 SPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRL------WMIVNGGKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp CTTSCEEEEETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCE------EEEETTTEEEEEETTEEEEECCCBC
T ss_pred cCCCcEEEEECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCE------EEEeCCceEEEecCCCCCeeEeccC
Confidence 998887776654333333342 122222223333446888999998873 3445567777764332333222221
Q ss_pred ----cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccc--cccCccEEEEEEccCC
Q 022184 243 ----LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR--LHLGTSIALVEFCPTQ 300 (301)
Q Consensus 243 ----~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~~~v~~~~~spdg 300 (301)
....+..+.+.+++..++++. ++.| ++..+.++.-..+.. .. ...+.++.|.+++
T Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~-~~~~~~v~~~~~~ 304 (327)
T 2xbg_A 244 PLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKV-PSNFYKILFFSPD 304 (327)
T ss_dssp TTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTS-SSCCCEEEEEETT
T ss_pred CcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCC-CCCeEEEEEECCC
Confidence 123578899998887766654 6666 344444432221111 11 2456677775443
No 287
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.39 E-value=0.0002 Score=62.20 Aligned_cols=208 Identities=8% Similarity=-0.095 Sum_probs=122.6
Q ss_pred CCcceEEEECCCCCeEEEEec-CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEe
Q 022184 63 EGDPMTIAVNPSGDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMH 140 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d 140 (301)
-..+..++|++.+..|..+.. .+.|+.+++++......... ........+++.+.+..|+.+ ...+.|.+.+
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~------~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~ 112 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------SGLLSPDGLACDWLGEKLYWTDSETNRIEVSN 112 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe------CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEE
Confidence 345789999997777766554 57788888765422111111 122467899999965555554 4578999999
Q ss_pred CCCcceecccccCCccEEEEEecCCCcEEEEEeC--CCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEE
Q 022184 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (301)
+............-.....|++.|.+..|+.... .+.|...++..... ..+....-.....+++++++..+| +
T Consensus 113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~~P~Glald~~~~~LY----~ 187 (619)
T 3s94_A 113 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEEQKLY----W 187 (619)
T ss_dssp TTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEE----E
T ss_pred CCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEeCCCCCCcEEEEEccCCEEE----E
Confidence 8754332222233345778999997555555443 35677777754333 333222334578999999877643 4
Q ss_pred EeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 219 QRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 219 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
+-...+.|..+|+..................+++.++ ..+.+-...+.|...|..+++....+
T Consensus 188 aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 188 ADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp EETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred EeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 4566778999998765443222212233456777665 34444445678999998877654433
No 288
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.38 E-value=0.00029 Score=56.33 Aligned_cols=202 Identities=12% Similarity=0.103 Sum_probs=114.8
Q ss_pred CcceEEEECCCCCeEEEEe------------cCCcEEEEEEcCCccccccccccCC-CCCCCCCeeEEEEee--CCC-EE
Q 022184 64 GDPMTIAVNPSGDDFVCST------------TNGGCKLFEVYGGATDINLLAKKMP-PLQDAGPQKCLSFSV--DGS-RF 127 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~------------~d~~i~~w~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~--~~~-~l 127 (301)
.....+...|+|..+++++ .+|.|.++|.++...........-. .....-....+.+.+ ++. +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 3456777888876555542 6899999998743221111111000 111223567788776 454 34
Q ss_pred EEee-c--CCeEEEEeCCCcce----ecccccC-CccEEEEEecCCCcEEEEEeC-----------------CCcEEEEe
Q 022184 128 AAGG-V--DGHLRIMHWPSLRI----ILDEPKA-HKSVLDMDFSLDSEFLATTST-----------------DGSARIWK 182 (301)
Q Consensus 128 ~~~~-~--dg~i~v~d~~~~~~----~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-----------------d~~i~i~d 182 (301)
+++. . +..|.+|++..... +..+... -....++.+.++|.++++... .+.|..+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 4442 2 46788887754321 1122221 136789999999997777541 23444454
Q ss_pred CCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC-ceE--eeeeeccCCCcEEEEEcC-CCCE
Q 022184 183 TEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST-WNK--IGHKRLLRKPASVLSISL-DGKY 258 (301)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~ 258 (301)
. ++.. .+...- ...+.++|+||++.+| ++.+..+.|..|++.. ++. .+.+ ........+++++ +|++
T Consensus 210 ~--~~~~-~~~~~l-~~pNGia~spDg~~lY----vadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 210 P--NDVR-VVAEGF-DFANGINISPDGKYVY----IAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDL 280 (355)
T ss_dssp T--TCCE-EEEEEE-SSEEEEEECTTSSEEE----EEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCE
T ss_pred C--CeEE-EeecCC-cccCcceECCCCCEEE----EEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcE
Confidence 4 3332 222222 2478999999999743 4455678999999863 222 1223 2245567899999 5988
Q ss_pred EEEeeCC-CcEEEEeCC
Q 022184 259 LAMGSKD-GDICVVDVK 274 (301)
Q Consensus 259 l~~~~~d-~~i~i~~~~ 274 (301)
.+++..+ +.|..|+..
T Consensus 281 wva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 281 WVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEESCHHHHHSCCTT
T ss_pred EEEecCCceEEEEECCC
Confidence 7766544 345555544
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.36 E-value=0.00035 Score=62.17 Aligned_cols=188 Identities=9% Similarity=-0.050 Sum_probs=113.7
Q ss_pred eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeCCCc----ceecccc
Q 022184 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSL----RIILDEP 151 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~----~~~~~~~ 151 (301)
+|+.+. ...|+..++....... .......+..++|++....|+.. ...+.|+.+++... .....+.
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~--------l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~ 467 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTS--------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 467 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEE--------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred cccccc-ccceeEeeccCCccee--------eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe
Confidence 444443 3447777665443211 11123567889999855555544 45678988888642 1222222
Q ss_pred cCCccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEE
Q 022184 152 KAHKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (301)
Q Consensus 152 ~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d 230 (301)
........|++.+.++ ++++-...+.|.+.++........+. ........|++.|.+.++|+ +-.+....|...+
T Consensus 468 ~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~~l~~P~gIaVDp~~g~LYw---tD~g~~~~I~~~~ 543 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYW---TDWGTPAKIKKGG 543 (791)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEE---EECSSSCEEEEEE
T ss_pred cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-CCCCCcceEEEecCCCCEEE---ecCCCCCeEEEEe
Confidence 2334567899988665 45555567899999997555433333 33345889999998776432 2223347899999
Q ss_pred ccCceEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCce
Q 022184 231 ISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKME 277 (301)
Q Consensus 231 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~ 277 (301)
+............-.....|++++.+..|+.+. ..+.|..+++....
T Consensus 544 ~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 544 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 876544333333335688999998777777664 45679999986543
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.36 E-value=9.1e-05 Score=58.10 Aligned_cols=156 Identities=9% Similarity=-0.004 Sum_probs=102.2
Q ss_pred eeEEEEeeCCCEEEEee-cCCeEEEEeCCCcceec-cccc----CC--ccEEEEEe---cCCCcEEEEEe----------
Q 022184 115 QKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRIIL-DEPK----AH--KSVLDMDF---SLDSEFLATTS---------- 173 (301)
Q Consensus 115 v~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~~~-~~~~----~~--~~i~~~~~---~~~~~~l~~~~---------- 173 (301)
..+++|++....|..++ ..+.|..|+...+.... .+.. .. ..+..+.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 35689988555565555 78999999987553221 2222 11 14689999 68887777543
Q ss_pred ---CCCcEEEEeCC---CCceEEEEeec------------CCCCeeEEEEccCCCcceEEEEEEeCCc-ceEEEEEccCc
Q 022184 174 ---TDGSARIWKTE---DGVAWTFLTRN------------SDEKIELCRFSKDGTKPFLFCTVQRGDK-ALLAVYDISTW 234 (301)
Q Consensus 174 ---~d~~i~i~d~~---~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~d~~~~ 234 (301)
.+..+..||+. +++.+...... .......++..++|+. -++.+.. +.|...+....
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna-----YVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS-----YVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE-----EEEEEESSCEEEEECTTSC
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE-----EEeCCCCCCeEEEEeCCCC
Confidence 25779999999 77766555321 1124789999999995 2334444 66776666543
Q ss_pred eEeeee-----eccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 235 NKIGHK-----RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 235 ~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
...... .......+.++++|+|+.|++....|.+..+|+..
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 221111 11122467999999999888887799999999874
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=0.00062 Score=56.89 Aligned_cols=252 Identities=6% Similarity=-0.123 Sum_probs=133.1
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEE-------CCCCCeEE
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAV-------NPSGDDFV 79 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~l~ 79 (301)
...++|.|. ...++.++-. ..-.|+.++.....+... .. .-......+..++| ++++++|+
T Consensus 141 p~~la~dp~-~~~~Lyv~~~--------~~~~i~~ID~~~~~v~~l--~~-~~~~~~~~p~~ia~~~~~~~~d~~G~~ly 208 (496)
T 3kya_A 141 NGRLAFDPL-NKDHLYICYD--------GHKAIQLIDLKNRMLSSP--LN-INTIPTNRIRSIAFNKKIEGYADEAEYMI 208 (496)
T ss_dssp EEEEEEETT-EEEEEEEEEE--------TEEEEEEEETTTTEEEEE--EC-CTTSSCSBEEEEEECCCBTTTBCTTCEEE
T ss_pred CCEEEEccC-CCCEEEEEEC--------CCCeEEEEECCCCEEEEE--Ec-cCccccCCCcEEEEeecccccCCCCCEEE
Confidence 456777752 1134444422 122577777666554321 00 01112346899999 99999777
Q ss_pred EEecCC-c------EEEEEEcC-CccccccccccCCCCCCCCCeeEEEEeeC-CCEEEEeecCCeEEEEeCC-------C
Q 022184 80 CSTTNG-G------CKLFEVYG-GATDINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWP-------S 143 (301)
Q Consensus 80 ~~~~d~-~------i~~w~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~v~d~~-------~ 143 (301)
++...+ . |.+++... +.............. .....++++|+ +.++++-..++.|..+|+. +
T Consensus 209 vad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~---~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~t 285 (496)
T 3kya_A 209 VAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY---KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKN 285 (496)
T ss_dssp EEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE---SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHT
T ss_pred EEeCCCCCcccCceEEEEecCCCCceeecccceeeccC---CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccC
Confidence 766554 2 55555333 121100000001111 23457788994 5555555677889999987 4
Q ss_pred cce-----------eccc--ccCCccEEEEEecCCCcEEEEE-eCCCcEEEEeCC--CCce--EEEEeec--CC------
Q 022184 144 LRI-----------ILDE--PKAHKSVLDMDFSLDSEFLATT-STDGSARIWKTE--DGVA--WTFLTRN--SD------ 197 (301)
Q Consensus 144 ~~~-----------~~~~--~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~--~~~~--~~~~~~~--~~------ 197 (301)
+.. ...+ .........++|+|+++.|+.+ .....|+.++.. .+.. ...+.+. ..
T Consensus 286 g~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~ 365 (496)
T 3kya_A 286 GGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDV 365 (496)
T ss_dssp TCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCB
T ss_pred ceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCc
Confidence 432 0011 1122345789999999954444 466788886653 3321 1223221 00
Q ss_pred ------CCee-EEEEc-------cCCCcceEEEEEEeCCcceEEEEEccCceEeeeeecc--------------------
Q 022184 198 ------EKIE-LCRFS-------KDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL-------------------- 243 (301)
Q Consensus 198 ------~~v~-~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------------------- 243 (301)
.... .+... +++.. .++-....+|+.++. ++.. ..+.+.
T Consensus 366 ~~~a~f~~P~~gv~vd~~~~~~~~~g~l-----yVaD~~N~rIr~i~~-~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~ 438 (496)
T 3kya_A 366 GTEARMNNPCQGVFVKNPDYTGEEEYDF-----YFVDRLNFCVRKVTP-EGIV-STYAGRGASTSLADGNQWGTDDGDLR 438 (496)
T ss_dssp GGGCBCSSEEEEEEEECTTCCSSCCEEE-----EEEEGGGTEEEEECT-TCBE-EEEEESCTTHHHHHSCSCCCCCEETT
T ss_pred ccccccCCCeEEEEEccccccccCCCeE-----EEEECCCCEEEEEeC-CCCE-EEEecccccccccCccccccCCCCch
Confidence 1133 34443 33432 355566778888884 4432 222211
Q ss_pred ----CCCcEEEEEcCC-CCEEEEeeCCCcEEEEeCCCceeec
Q 022184 244 ----RKPASVLSISLD-GKYLAMGSKDGDICVVDVKKMEINH 280 (301)
Q Consensus 244 ----~~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~ 280 (301)
-.....|+++++ |.++++=..+.+|+.++++......
T Consensus 439 ~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 439 EVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp TTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred hhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 023578999997 6666655667889999987655443
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.35 E-value=0.00044 Score=54.75 Aligned_cols=164 Identities=6% Similarity=-0.066 Sum_probs=99.7
Q ss_pred CcceEEEECCCCCeEEEE-ecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee--cCCeEEEEe
Q 022184 64 GDPMTIAVNPSGDDFVCS-TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG--VDGHLRIMH 140 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~-~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~v~d 140 (301)
..+..+++.+.+..|+.+ ...+.|.+++++..... .+.. ........+++.|.+..|+.+. ..+.|...+
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~~------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLFW------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEC------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEEe------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence 457789998755555544 45678999887654321 1110 1234568999999766666555 257888888
Q ss_pred CCCcceecccccCCccEEEEEecCCCcEEEEE-eCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEE
Q 022184 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATT-STDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (301)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (301)
+............-.....++++|++..|+.+ +..+.|..+|+..... ..+..........+++..+ .+ ..+
T Consensus 152 ~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~glav~~~--~l----ywt 224 (318)
T 3sov_A 152 MDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFED--IL----YWT 224 (318)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSCCSCEEEEEEETT--EE----EEE
T ss_pred cCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCCCCCceEEEEeCC--EE----EEE
Confidence 76432221122222456899999976655554 4567899999865433 3332222234667777533 32 355
Q ss_pred eCCcceEEEEEccCceEeeeee
Q 022184 220 RGDKALLAVYDISTWNKIGHKR 241 (301)
Q Consensus 220 ~~~~~~i~~~d~~~~~~~~~~~ 241 (301)
....+.|..+|..+++....+.
T Consensus 225 d~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 225 DWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp ETTTTEEEEEETTTCCSCEEEE
T ss_pred ecCCCeEEEEECCCCCceEEEe
Confidence 6677889999987776554443
No 293
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.34 E-value=4.4e-05 Score=65.79 Aligned_cols=187 Identities=11% Similarity=0.119 Sum_probs=111.9
Q ss_pred EEEECCCCCeEEEEec--------------------C----CcEEEEEEcCCccccccccccCCC--CCC-CCCeeEEEE
Q 022184 68 TIAVNPSGDDFVCSTT--------------------N----GGCKLFEVYGGATDINLLAKKMPP--LQD-AGPQKCLSF 120 (301)
Q Consensus 68 ~~~~~~~~~~l~~~~~--------------------d----~~i~~w~~~~~~~~~~~~~~~~~~--~~~-~~~v~~~~~ 120 (301)
.++++|+...++.+.. | +.|..+|.++++............ +.. ..++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4667777777776553 2 578888888887765543211110 001 11221 222
Q ss_pred e-eCCC---EEEEeecCCeEEEEeCCCcceecccccCC-------------cc---------------------------
Q 022184 121 S-VDGS---RFAAGGVDGHLRIMHWPSLRIILDEPKAH-------------KS--------------------------- 156 (301)
Q Consensus 121 s-~~~~---~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-------------~~--------------------------- 156 (301)
. .+|+ .++.++.+|.++++|.++++.+....... .+
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 2 3674 67888999999999999988764432211 00
Q ss_pred -----EEEEEecCCCcEEEEEe---------------------------------CCCcEEEEeCCCCceEEEEeecCCC
Q 022184 157 -----VLDMDFSLDSEFLATTS---------------------------------TDGSARIWKTEDGVAWTFLTRNSDE 198 (301)
Q Consensus 157 -----i~~~~~~~~~~~l~~~~---------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~ 198 (301)
-..++++|+...+++.. .+|.|..||+.+++.+-+......
T Consensus 409 ~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~- 487 (582)
T 1flg_A 409 LGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP- 487 (582)
T ss_dssp TCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC-
T ss_pred ccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC-
Confidence 01345666555544432 257899999999998776654322
Q ss_pred CeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCC-cEEEEEcCCCC-EEEEe
Q 022184 199 KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKP-ASVLSISLDGK-YLAMG 262 (301)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~-~l~~~ 262 (301)
...-.....+.. ++.++.|+.++.||.++++.+-+++..... ..-+.|..+|+ |+++.
T Consensus 488 -~~~g~~~taggl-----vf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 488 -LWAGVLATAGNL-----VFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp -CCSCCEEETTTE-----EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred -CcccceEeCCCE-----EEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 222122223444 455788999999999999998777654332 22366667886 44443
No 294
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.34 E-value=9.2e-05 Score=63.69 Aligned_cols=186 Identities=13% Similarity=0.007 Sum_probs=111.6
Q ss_pred EEEECCCCCeEEEEecC----------------CcEEEEEEcCCccccccccccCC--CCC-CCCCeeEEEEeeCCC---
Q 022184 68 TIAVNPSGDDFVCSTTN----------------GGCKLFEVYGGATDINLLAKKMP--PLQ-DAGPQKCLSFSVDGS--- 125 (301)
Q Consensus 68 ~~~~~~~~~~l~~~~~d----------------~~i~~w~~~~~~~~~~~~~~~~~--~~~-~~~~v~~~~~s~~~~--- 125 (301)
.+++.++...++.+..+ +.|..+|.++++........... ... ...++ -+...++|+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEE
Confidence 35666766666655432 25888888887765444321100 000 11222 233335774
Q ss_pred EEEEeecCCeEEEEeCCCcceecccccCC-------------ccE--------------------------EEEEecCCC
Q 022184 126 RFAAGGVDGHLRIMHWPSLRIILDEPKAH-------------KSV--------------------------LDMDFSLDS 166 (301)
Q Consensus 126 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-------------~~i--------------------------~~~~~~~~~ 166 (301)
.++.++.+|.++++|..+++.+....... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 57778889999999999988765432111 111 235778877
Q ss_pred cEEEEEe-------------------------------------CCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCC
Q 022184 167 EFLATTS-------------------------------------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209 (301)
Q Consensus 167 ~~l~~~~-------------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 209 (301)
.+++... .++.|..||+.+++.+-.+..... +....+...+
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~--~~~~~~~t~g 475 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA--AWGGTLYTKG 475 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC--CCSBCEEETT
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC--ccceeEEECC
Confidence 7666543 347899999999998877764322 2232333344
Q ss_pred CcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCC-cEEEEEcCCCCEEEE
Q 022184 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKP-ASVLSISLDGKYLAM 261 (301)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~ 261 (301)
.. ++.++.++.|+.+|.++++.+..+...... ...+.+..+|+.++.
T Consensus 476 g~-----v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 476 GL-----VWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp TE-----EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CE-----EEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 44 455788999999999999988776644321 223445577764443
No 295
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.34 E-value=0.00046 Score=55.54 Aligned_cols=227 Identities=12% Similarity=0.007 Sum_probs=119.8
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC---CCEEEEeec----C---
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGGV----D--- 133 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~----d--- 133 (301)
.....|+|.|+|+. +++..++.|++++. .+. ..+.. .............++++|+ +..|+++.. +
T Consensus 29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d~-~G~--~~~~~-~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRY-LVTERPGRLVLISP-SGK--KLVAS-FDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEE-EEEETTTEEEEECS-SCE--EEEEE-CCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeE-EEEeCCCEEEEEeC-CCc--eEeec-cceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 45789999999974 44566788888863 332 11111 0111123456889999997 555555443 2
Q ss_pred -CeEEEEeCCCc-------ceecc-cccC-CccEEEEEecCCCcEEEEEeCC-------------CcEEEEeCCCCc---
Q 022184 134 -GHLRIMHWPSL-------RIILD-EPKA-HKSVLDMDFSLDSEFLATTSTD-------------GSARIWKTEDGV--- 187 (301)
Q Consensus 134 -g~i~v~d~~~~-------~~~~~-~~~~-~~~i~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~--- 187 (301)
..|..|+.... +.+.. +... ......++|.|||.++++.+.. +.|.-++....-
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56777776543 11111 2111 1124679999999877664431 345555543210
Q ss_pred ----eEEEEeecCCCCeeEEEEcc-CCCcceEEEEEEeCCc--ceEEEEEccC--------c--------eEeeeeeccC
Q 022184 188 ----AWTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGDK--ALLAVYDIST--------W--------NKIGHKRLLR 244 (301)
Q Consensus 188 ----~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~--~~i~~~d~~~--------~--------~~~~~~~~~~ 244 (301)
....+..... ....++|+| ++.. |+ .-.+.+ ..|.+..... + .++..+....
T Consensus 184 npf~~~~i~a~G~r-np~Gla~d~~~g~l-~v---~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ 258 (354)
T 3a9g_A 184 NPFPNSPIWSYGHR-NPQGIDWHRASGVM-VA---TEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSET 258 (354)
T ss_dssp SSSTTCCEEEECCS-CCCEEEECTTTCCE-EE---EECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC
T ss_pred CCCCCCcEEEEccC-CcceEEEeCCCCCE-EE---EecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCC
Confidence 0122222222 267899999 5552 21 222222 1233332111 0 0111111122
Q ss_pred CCcEEEEEc-------CCCCEEEEeeCCCcEEEEeCCCc-eee--ccccccccCccEEEEEEccCCC
Q 022184 245 KPASVLSIS-------LDGKYLAMGSKDGDICVVDVKKM-EIN--HWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 245 ~~v~~~~~s-------~~~~~l~~~~~d~~i~i~~~~~~-~~~--~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.....++|. .+|.++++.-..+.|...++... +.. ..+.... ...+..+++.|||.
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-~~rp~~v~~~pDG~ 324 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNV-FGRLRDVVIDDDGG 324 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTT-SCCEEEEEECTTSC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCC-CCCeeEEEECCCCc
Confidence 356778883 56777776666778988888753 221 1222222 45789999999984
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.30 E-value=0.00033 Score=55.45 Aligned_cols=166 Identities=11% Similarity=0.187 Sum_probs=105.4
Q ss_pred CCCEEEEeecCCeEEEEeCCCcceecccccCCccEEEEEecC----CCcE--E-EEEe-C--CCcEEEEeCC--CCceEE
Q 022184 123 DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSL----DSEF--L-ATTS-T--DGSARIWKTE--DGVAWT 190 (301)
Q Consensus 123 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~----~~~~--l-~~~~-~--d~~i~i~d~~--~~~~~~ 190 (301)
...+++.....+-+.+||+ +++.+..+.. +.+..+..-| .|+. + ++.. . +++|.+|++. +++ +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456666667788999999 7887776643 4566666655 2332 3 3333 3 5789999773 333 44
Q ss_pred EEee---c--CC-CCeeEEEE--ccCCCcceEEEEEEeCCcceEEEEEcc-------CceEeeeeeccCCCcEEEEEcCC
Q 022184 191 FLTR---N--SD-EKIELCRF--SKDGTKPFLFCTVQRGDKALLAVYDIS-------TWNKIGHKRLLRKPASVLSISLD 255 (301)
Q Consensus 191 ~~~~---~--~~-~~v~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~d~~-------~~~~~~~~~~~~~~v~~~~~s~~ 255 (301)
.+.. + .. ..+..+++ +|.....+ ++....++.+..|++. +.+.++.+.. ...+..+...+.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~y---afV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~ 190 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYY---AMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDE 190 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEE---EEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEE---EEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCC
Confidence 4421 1 11 34677777 77544323 4566777999999983 3355666654 456888999998
Q ss_pred CCEEEEeeCCCcEEEEeCC-----CceeeccccccccCccEEEEEE
Q 022184 256 GKYLAMGSKDGDICVVDVK-----KMEINHWSKRLHLGTSIALVEF 296 (301)
Q Consensus 256 ~~~l~~~~~d~~i~i~~~~-----~~~~~~~~~~~~~~~~v~~~~~ 296 (301)
...|+.+-++.-|..|+.+ +++.+..+...+....+..|+.
T Consensus 191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai 236 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTI 236 (355)
T ss_dssp TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEE
T ss_pred CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEE
Confidence 8999999998777777755 3445544322332346777777
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.24 E-value=0.00013 Score=62.85 Aligned_cols=203 Identities=9% Similarity=0.011 Sum_probs=116.2
Q ss_pred CCeEEEEec-CCcEEEEEE-cCCccccccccccCCCCC----CCCCeeEEEEeeCCCE----EEEeecCCeEEEEeCCCc
Q 022184 75 GDDFVCSTT-NGGCKLFEV-YGGATDINLLAKKMPPLQ----DAGPQKCLSFSVDGSR----FAAGGVDGHLRIMHWPSL 144 (301)
Q Consensus 75 ~~~l~~~~~-d~~i~~w~~-~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~----l~~~~~dg~i~v~d~~~~ 144 (301)
+..+++++. ++.|.-+|. ++++...+.......... .......++++|.+.. ++.++.|+.|.-+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 345555555 677777787 666654443221100000 0001123455554444 888888999999999999
Q ss_pred ceecccccCCc----cEEE-EEecCCCcEEEEEe------CCCcEEEEeCCCCceEEEEeecCCCC--------------
Q 022184 145 RIILDEPKAHK----SVLD-MDFSLDSEFLATTS------TDGSARIWKTEDGVAWTFLTRNSDEK-------------- 199 (301)
Q Consensus 145 ~~~~~~~~~~~----~i~~-~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~-------------- 199 (301)
+.+.+...... .+.+ .... ++ .++.++ .++.|+.+|.++|+.+-.+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 88765432210 1111 1111 44 444444 37999999999999887765332110
Q ss_pred ----------------------e-eEEEEccCCCcceEEEEEEeCC--------------cceEEEEEccCceEeeeeec
Q 022184 200 ----------------------I-ELCRFSKDGTKPFLFCTVQRGD--------------KALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 200 ----------------------v-~~~~~~~~~~~~~~~~~~~~~~--------------~~~i~~~d~~~~~~~~~~~~ 242 (301)
+ ..+++.+....+| +.++.. .+.|..+|.++++.+-.+..
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy---~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~ 296 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIY---FGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK 296 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEE---EECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEE---EeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeec
Confidence 0 1244555555422 122211 24799999999988755543
Q ss_pred cCC---------CcEEEEEc-CCC---CEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 243 LRK---------PASVLSIS-LDG---KYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 243 ~~~---------~v~~~~~s-~~~---~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
... ...-+... .+| +.++.++.+|.++++|..+++++...
T Consensus 297 ~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 297 TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 321 11112222 567 57788899999999999999877543
No 298
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.20 E-value=0.00091 Score=52.38 Aligned_cols=237 Identities=13% Similarity=0.076 Sum_probs=115.4
Q ss_pred ccEEEecC-CccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC-----CcEEEEEE
Q 022184 19 VNLVVLGK-SSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN-----GGCKLFEV 92 (301)
Q Consensus 19 ~~~~~~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~~w~~ 92 (301)
..+++.|+ .... ...-.++.+++....+...+.. ......-..+. .+++.++.|+.+ ..+.+||+
T Consensus 15 ~~i~~~GG~~~~~---~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~ 85 (301)
T 2vpj_A 15 EVLLVVGGFGSQQ---SPIDVVEKYDPKTQEWSFLPSI----TRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDY 85 (301)
T ss_dssp EEEEEECCEETTT---EECCCEEEEETTTTEEEECCCC----SSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEET
T ss_pred CEEEEEeCccCCC---cceeEEEEEcCCCCeEEeCCCC----ChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEEC
Confidence 45777777 3221 1122466677766666443211 11111111222 256667777654 46888888
Q ss_pred cCCcc-ccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC-----CeEEEEeCCCcceec--ccccCCccEEEEEecC
Q 022184 93 YGGAT-DINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-----GHLRIMHWPSLRIIL--DEPKAHKSVLDMDFSL 164 (301)
Q Consensus 93 ~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~ 164 (301)
.+... ..... ..+.....-.+++ ..++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+
T Consensus 86 ~~~~~~~W~~~----~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-- 158 (301)
T 2vpj_A 86 TADEDGVWYSV----APMNVRRGLAGAT-TLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-- 158 (301)
T ss_dssp TCCTTCCCEEE----CCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--
T ss_pred CCCCCCeeEEC----CCCCCCccceeEE-EECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--
Confidence 76551 01111 1111111111222 2367777777653 368889987654321 12111111122222
Q ss_pred CCcEEEEEeCC-----CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCC-----cceEEEEEccCc
Q 022184 165 DSEFLATTSTD-----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD-----KALLAVYDISTW 234 (301)
Q Consensus 165 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~d~~~~ 234 (301)
+++.++.|+.+ ..+.+||+.+.+-...-..+....-..+.. -+++ + .+.++. ...+.+||+.+.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~-i----~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDH-I----YVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTE-E----EEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCE-E----EEEeCCCCCcccceEEEEeCCCC
Confidence 67777777754 458899988775443321111111112222 2333 2 233443 256899999875
Q ss_pred eEe--eeeeccCCCcEEEEEcCCCCEEEEeeCC-----CcEEEEeCCCceee
Q 022184 235 NKI--GHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEIN 279 (301)
Q Consensus 235 ~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~ 279 (301)
+-. ............+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 233 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 233 SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 432 222211222222333 67788888765 45889999876543
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.18 E-value=0.0014 Score=52.11 Aligned_cols=191 Identities=10% Similarity=0.083 Sum_probs=104.3
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeC--
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW-- 141 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~-- 141 (301)
+.+..+.+.++++.++++ .++. +|....+......... .....+..+.+.|++.+++.+...+..+-.|-
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~--v~~S~DgG~tW~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG 193 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGA--IYRTKDSGKNWQALVQ-----EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQ 193 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCC--EEEESSTTSSEEEEEC-----SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTC
T ss_pred CCeEEEEEECCCCEEEEe-CCcc--EEEEcCCCCCCEEeec-----CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCC
Confidence 446778877766655554 4553 3444332222221111 12346788999998887776654443333342
Q ss_pred CCcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeec---CCCCeeEEEEccCCCcceEEEEE
Q 022184 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRN---SDEKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~ 218 (301)
.+.+.+. ......+..+.+.++++.++ ++.+|.+++.+...++.-..+... ....+..+.+.+++.. +
T Consensus 194 ~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~------~ 264 (327)
T 2xbg_A 194 TAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV------W 264 (327)
T ss_dssp SSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE------E
T ss_pred CceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE------E
Confidence 2223221 12345788899999887554 456787777643334433333222 1224788899987763 3
Q ss_pred EeCCcceEEEEEccCceEeeeee---ccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeC
Q 022184 219 QRGDKALLAVYDISTWNKIGHKR---LLRKPASVLSISLDGKYLAMGSKDGDICVVDV 273 (301)
Q Consensus 219 ~~~~~~~i~~~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~ 273 (301)
..+.++.| ++....++.-.... .....+..+.|.++++ +++++.+|.|.-++-
T Consensus 265 ~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 265 LAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp EEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred EEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 33446656 33333333222222 1235678888876555 556667887776653
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=0.00066 Score=56.74 Aligned_cols=204 Identities=9% Similarity=-0.029 Sum_probs=117.3
Q ss_pred cceEEEECC-CCCeEEEEec-CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEE-------eeCCCEEEEeecCC-
Q 022184 65 DPMTIAVNP-SGDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF-------SVDGSRFAAGGVDG- 134 (301)
Q Consensus 65 ~v~~~~~~~-~~~~l~~~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~~~~~l~~~~~dg- 134 (301)
....|+|+| +...|+.+.. .+.|++.|++++........ . .........++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~---~-~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI---N-TIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC---T-TSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc---C-ccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 366899998 3555555544 35677777776554221111 0 012346899999 99999777665543
Q ss_pred ------eEEEEeCCC-ccee-----cccccCCccEEEEEecCCC-cEEEEEeCCCcEEEEeCC-------CCce------
Q 022184 135 ------HLRIMHWPS-LRII-----LDEPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTE-------DGVA------ 188 (301)
Q Consensus 135 ------~i~v~d~~~-~~~~-----~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~-------~~~~------ 188 (301)
.|.+++... +... ..+. .......++++|++ .++++-..++.|..+|+. ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 266665333 2221 1111 11245678899954 455566677889999987 4543
Q ss_pred -----EEE-EeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEcc--CceEe--eeeecc---C-----------
Q 022184 189 -----WTF-LTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS--TWNKI--GHKRLL---R----------- 244 (301)
Q Consensus 189 -----~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~--~~~~~--~~~~~~---~----------- 244 (301)
... +..........++|+|+|+.+| ++-.....|+.+|.. .+... ..+.+. .
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lY----vaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~ 370 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAY----FGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEAR 370 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEE----EEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCB
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEE----EEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccc
Confidence 222 2222333468999999999532 455667788886653 32210 111111 0
Q ss_pred -CCcE-EEEEc-------CCCCEEEEeeCCCcEEEEeCCCcee
Q 022184 245 -KPAS-VLSIS-------LDGKYLAMGSKDGDICVVDVKKMEI 278 (301)
Q Consensus 245 -~~v~-~~~~s-------~~~~~l~~~~~d~~i~i~~~~~~~~ 278 (301)
.... .+... +++.++++=..+.+|+.++ .++..
T Consensus 371 f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v 412 (496)
T 3kya_A 371 MNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV 412 (496)
T ss_dssp CSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE
T ss_pred cCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCE
Confidence 1234 45554 4566666666778899998 45543
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.17 E-value=0.0015 Score=52.55 Aligned_cols=192 Identities=12% Similarity=0.051 Sum_probs=95.1
Q ss_pred CCcceEEEECCC---CCeEEEEec-C-----CcEEEEEEcCCccc--cccccccCCC-CCCCCCeeEEEEeeCCCEEEEe
Q 022184 63 EGDPMTIAVNPS---GDDFVCSTT-N-----GGCKLFEVYGGATD--INLLAKKMPP-LQDAGPQKCLSFSVDGSRFAAG 130 (301)
Q Consensus 63 ~~~v~~~~~~~~---~~~l~~~~~-d-----~~i~~w~~~~~~~~--~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~ 130 (301)
......++|+|+ +..|..+.. . +.|..++....... ..+... ... .........++|.|||.+.++.
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~-~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDG-IPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEE-ECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEe-CCCCCCCCcCCceEEECCCCCEEEEE
Confidence 456889999998 555554433 2 56778887643211 111111 110 0111123689999999766664
Q ss_pred ec-------------CCeEEEEeCCCc------------ceecccccCCccEEEEEecC-CCcEEEEEeCCCcE------
Q 022184 131 GV-------------DGHLRIMHWPSL------------RIILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSA------ 178 (301)
Q Consensus 131 ~~-------------dg~i~v~d~~~~------------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i------ 178 (301)
+. .|.|.-++.... .....+.........++|+| +++++++-.....+
T Consensus 153 G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~d 232 (352)
T 2ism_A 153 GEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHD 232 (352)
T ss_dssp CCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCC
T ss_pred CCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCe
Confidence 32 245666665421 00011111123467789999 56655543322221
Q ss_pred EEEeCCCCc------------------eEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE----
Q 022184 179 RIWKTEDGV------------------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK---- 236 (301)
Q Consensus 179 ~i~d~~~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---- 236 (301)
.+.-+..+. +...+ ........++| .+|.. .++.-..+.|...++.....
T Consensus 233 ei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~--~~~~ap~G~~~-~~G~l-----~v~~~~~~~v~~v~~~~~~~~~~~ 304 (352)
T 2ism_A 233 EVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW--PQGFPPGNLAF-FRGDL-----YVAGLRGQALLRLVLEGERGRWRV 304 (352)
T ss_dssp EEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC--TTCCCEEEEEE-ETTEE-----EEEETTTTEEEEEEEEEETTEEEE
T ss_pred EEEEeccCCcCCCCcccCCCCCCCCcCCeEec--CCCCCCcceEE-ECCEE-----EEEECCCCEEEEEEECCCCcceee
Confidence 122222221 11111 11123556777 34542 24445566777777654321
Q ss_pred --eeeeeccCCCcEEEEEcCCCCEEEEee
Q 022184 237 --IGHKRLLRKPASVLSISLDGKYLAMGS 263 (301)
Q Consensus 237 --~~~~~~~~~~v~~~~~s~~~~~l~~~~ 263 (301)
...+......+..+++.|||.++++..
T Consensus 305 ~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 305 LRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred cchheecccCCCeeEEEECCCCcEEEEEe
Confidence 112222235788999999997666653
No 302
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.17 E-value=0.00064 Score=53.43 Aligned_cols=231 Identities=9% Similarity=-0.007 Sum_probs=115.3
Q ss_pred cEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC----CcEEEEEEcCC
Q 022184 20 NLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN----GGCKLFEVYGG 95 (301)
Q Consensus 20 ~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----~~i~~w~~~~~ 95 (301)
.++++|+... .-.+|.|++....+...+..... ...-..+.+ ++..++.|+.+ ..+.+||+.+.
T Consensus 13 ~l~~~GG~~~------~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 13 YRIALFGGSQ------PQSCRYFNPKDYSWTDIRCPFEK----RRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKD 80 (306)
T ss_dssp EEEEEECCSS------TTSEEEEETTTTEEEECCCCSCC----CBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTT
T ss_pred eEEEEeCCCC------CceEEEecCCCCCEecCCCCCcc----cceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCC
Confidence 4666776433 22577778777766543221111 111122222 56666777654 56778887765
Q ss_pred ccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC------CeEEEEeCCCcceec--ccccCCccEEEEEecCCCc
Q 022184 96 ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD------GHLRIMHWPSLRIIL--DEPKAHKSVLDMDFSLDSE 167 (301)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~ 167 (301)
+-.. ... +.....-.+++ .-++++++.|+.+ ..+.+||..+.+-.. .+.........+.+ +++
T Consensus 81 ~W~~--~~~----~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 151 (306)
T 3ii7_A 81 SWYS--KLG----PPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGL 151 (306)
T ss_dssp EEEE--EEC----CSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE
T ss_pred eEEE--CCC----CCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCE
Confidence 4311 111 11111111122 2367777888765 468899987764322 12111111122222 567
Q ss_pred EEEEEeC---------CCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCc-----ceEEEEEccC
Q 022184 168 FLATTST---------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK-----ALLAVYDIST 233 (301)
Q Consensus 168 ~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~ 233 (301)
+++.|+. -..+.+||+.+.+-...-..+....-..+... +++ + .+.++.+ ..+.+||+.+
T Consensus 152 iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i----~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 152 IYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDK-I----FAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp EEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-E----EEECCEETTEEBCCEEEEETTT
T ss_pred EEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCE-E----EEEeCCCCCCCCceEEEeeCCC
Confidence 7777663 34588999987754332221111111122222 333 2 2333322 4688999877
Q ss_pred ceE--eeeeeccCCCcEEEEEcCCCCEEEEeeCC-----CcEEEEeCCCceee
Q 022184 234 WNK--IGHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEIN 279 (301)
Q Consensus 234 ~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~ 279 (301)
.+- +..+.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 226 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 226 NEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp TEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred CcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 542 2222222222333333 67788888754 46899999886543
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.14 E-value=0.0033 Score=54.67 Aligned_cols=204 Identities=6% Similarity=-0.075 Sum_probs=126.5
Q ss_pred CcceEEEECCCCCeEEEEe-cCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeC
Q 022184 64 GDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHW 141 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~ 141 (301)
..+..++|++.+..|..+. .++.|+.++++...... ... ........+++.+.+..|+.+ ...+.|.+.++
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~-v~~------~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~ 109 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEH-VVE------FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKL 109 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EEC------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEE-EEe------CCCCCcceEEEEeCCCEEEEEECCCCEEEEEec
Confidence 4578999999777666554 46788888876543211 111 012346788998765555544 45688999998
Q ss_pred CCcceecccccCCccEEEEEecCCCcEEEEEe--CCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEE
Q 022184 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATTS--TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (301)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (301)
+...........-.....++++|....|+... ..+.|...++.......... .-.....+++++++..+| ++
T Consensus 110 dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--~~~~P~GlalD~~~~~LY----~a 183 (628)
T 4a0p_A 110 DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--NVGRANGLTIDYAKRRLY----WT 183 (628)
T ss_dssp TSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SCSSEEEEEEETTTTEEE----EE
T ss_pred CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--CCCCcceEEEccccCEEE----EE
Confidence 65433222223334678999999555555444 24678888876554433332 234588999999888743 45
Q ss_pred eCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 220 RGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 220 ~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
-...+.|..+|+..... ..+.........+++.. +.++++-...+.|...|..+++....+
T Consensus 184 D~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 184 DLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp ETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred ECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 56678899999875433 22333334556788765 334444445688999998777544433
No 304
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.13 E-value=2.2e-05 Score=69.17 Aligned_cols=180 Identities=11% Similarity=-0.044 Sum_probs=104.1
Q ss_pred CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-cCCeEEEEeCCC----cceecccccCCccEE
Q 022184 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPS----LRIILDEPKAHKSVL 158 (301)
Q Consensus 84 d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~d~~~----~~~~~~~~~~~~~i~ 158 (301)
...|+..++.+..... .......+..++|++.+..|+.+. ..+.|+.+++.. ......+........
T Consensus 385 ~~~I~~id~~~~~~~~--------~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~ 456 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTS--------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 456 (699)
T ss_dssp TTC-CEECTTSCCEEC--------CSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC
T ss_pred ccceEEEeCCCCccee--------eeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc
Confidence 3456666665543311 111224567789998776666654 457899999875 222222212223456
Q ss_pred EEEecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEe-CCcceEEEEEccCceE
Q 022184 159 DMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR-GDKALLAVYDISTWNK 236 (301)
Q Consensus 159 ~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~d~~~~~~ 236 (301)
.|++.+. ++++++-...+.|.++++........+. ........+++.|.+.++| ++. +..+.|..+++.....
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-~~~~~P~giavDp~~g~ly----~td~~~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-EQGSKPRAIVVDPVHGFMY----WTDWGTPAKIKKGGLNGVDI 531 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC-CSSCCCCCEECCSSSSCCE----ECCCSSSCCEEBCCSSSCCC
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe-CCCCCcceEEEccCCCcEE----EcccCCCCeEEEEeCCCCCe
Confidence 7888864 4455554567889999987554333332 2223467899999877643 222 2236788888764322
Q ss_pred eeeeeccCCCcEEEEEcCCCCEEEEe-eCCCcEEEEeCCCc
Q 022184 237 IGHKRLLRKPASVLSISLDGKYLAMG-SKDGDICVVDVKKM 276 (301)
Q Consensus 237 ~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~ 276 (301)
.......-.....|+|+|++..|+.+ ...+.|..+++...
T Consensus 532 ~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 532 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 11111222346789999986655555 45678999998653
No 305
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.11 E-value=0.0022 Score=51.53 Aligned_cols=231 Identities=11% Similarity=0.029 Sum_probs=117.5
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC---CCEEEEee-c-------
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGG-V------- 132 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~-~------- 132 (301)
.....|+|.|+|++|+++...|.|++++.. +.....+................++|+|+ +..|.... .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 357899999999845555678988888743 22111111000011123456789999995 44554443 2
Q ss_pred CCeEEEEeCCCc-------ceec-cccc---CCccEEEEEecCCCcEEEEEeCC-------------CcEEEEeCCCCc-
Q 022184 133 DGHLRIMHWPSL-------RIIL-DEPK---AHKSVLDMDFSLDSEFLATTSTD-------------GSARIWKTEDGV- 187 (301)
Q Consensus 133 dg~i~v~d~~~~-------~~~~-~~~~---~~~~i~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~- 187 (301)
...|..+++... +.+. .+.. .......++|.|||.++++.+.. +.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666665432 1111 1111 11123579999999766665432 356666654220
Q ss_pred -----------eEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE--------------------
Q 022184 188 -----------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK-------------------- 236 (301)
Q Consensus 188 -----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------------------- 236 (301)
....+..... ....++|.|....+|+ .-.+.++.=.|.-+..+..
T Consensus 177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~---~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~ 252 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWL---NEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEA 252 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEE---EEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTC
T ss_pred CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEE---EecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcc
Confidence 1122222222 3778999994333221 2222221111111111110
Q ss_pred -----------eeeeeccCCCcEEEEEcC-------CCCEEEEeeCCCcEEEEeCCCceeecc--ccccccCccEEEEEE
Q 022184 237 -----------IGHKRLLRKPASVLSISL-------DGKYLAMGSKDGDICVVDVKKMEINHW--SKRLHLGTSIALVEF 296 (301)
Q Consensus 237 -----------~~~~~~~~~~v~~~~~s~-------~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~~~~~~~~v~~~~~ 296 (301)
+..+ .+...+..+.|.. +|+++++.-..+.|...++..++.... +.... ...+..+++
T Consensus 253 ~~~~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~rp~~v~~ 330 (353)
T 2g8s_A 253 KGEIVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDR-GQRIRDVRT 330 (353)
T ss_dssp CBSSCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGG-CCCEEEEEE
T ss_pred cCCCCCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCC-CCceeEEEE
Confidence 0001 1123456677753 466777666778888888876543322 11122 357899999
Q ss_pred ccCCC
Q 022184 297 CPTQR 301 (301)
Q Consensus 297 spdg~ 301 (301)
.|||.
T Consensus 331 ~pdG~ 335 (353)
T 2g8s_A 331 GPDGY 335 (353)
T ss_dssp CTTSC
T ss_pred CCCCc
Confidence 99984
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.04 E-value=0.003 Score=54.83 Aligned_cols=192 Identities=6% Similarity=-0.020 Sum_probs=112.3
Q ss_pred eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-cCCeEEEEeCCCcce-ecccccCC
Q 022184 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRI-ILDEPKAH 154 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~-~~~~~~~~ 154 (301)
+|+-+ ....|+..++........ ........+..++|++.+..|+.+. ..+.|..++++.... ...+...-
T Consensus 11 ~~~~~-~~~~I~~i~~~~~~~~~~------~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~ 83 (619)
T 3s94_A 11 LLLYA-NRRDLRLVDATNGKENAT------IVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL 83 (619)
T ss_dssp CEEEE-CSSBEEEECCC---------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSC
T ss_pred eEEEe-ccccEEEEeCCCCcceEE------EEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCC
Confidence 44443 345588888765421111 1112334578999999766666554 467888888865432 12222222
Q ss_pred ccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccC
Q 022184 155 KSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST 233 (301)
Q Consensus 155 ~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 233 (301)
.....+++.+.++ ++++-...+.|.+.++........+. ..-.....+++.|.+..+|+ .--+..+.|...++..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~-~~l~~P~~Iavdp~~g~ly~---tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-QELDQPRAIALDPSSGFMYW---TDWGEVPKIERAGMDG 159 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSCCCCEEEETTTTEEEE---EECSSSCEEEEEETTS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEe-CCCCCCceEEEecCCCeEEE---eccCCCCEEEEEECCC
Confidence 5688999998555 55555567899999987654333332 22334789999998775332 2223356788888764
Q ss_pred ceEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCceee
Q 022184 234 WNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEIN 279 (301)
Q Consensus 234 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~ 279 (301)
..........-.....++++++++.|+.+. ..+.|..+++......
T Consensus 160 ~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~ 206 (619)
T 3s94_A 160 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ 206 (619)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC
T ss_pred CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccE
Confidence 433222222334678999999776666664 4578999998765433
No 307
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.97 E-value=0.0032 Score=49.47 Aligned_cols=234 Identities=12% Similarity=0.060 Sum_probs=114.0
Q ss_pred ccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec----C-----CcEEE
Q 022184 19 VNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT----N-----GGCKL 89 (301)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----d-----~~i~~ 89 (301)
..+++.|+... ...-.++.|++....+...+.......+| ..+.+ +++.++.|+. + ..+.+
T Consensus 25 ~~i~v~GG~~~----~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~ 94 (308)
T 1zgk_A 25 RLIYTAGGYFR----QSLSYLEAYNPSNGTWLRLADLQVPRSGL----AGCVV--GGLLYAVGGRNNSPDGNTDSSALDC 94 (308)
T ss_dssp CCEEEECCBSS----SBCCCEEEEETTTTEEEECCCCSSCCBSC----EEEEE--TTEEEEECCEEEETTEEEECCCEEE
T ss_pred CEEEEEeCcCC----CCcceEEEEcCCCCeEeECCCCCcccccc----eEEEE--CCEEEEECCCcCCCCCCeecceEEE
Confidence 45777777411 12224677777776665432211111122 12222 5666666665 2 45778
Q ss_pred EEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC-----CeEEEEeCCCcceec--ccccCCccEEEEEe
Q 022184 90 FEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-----GHLRIMHWPSLRIIL--DEPKAHKSVLDMDF 162 (301)
Q Consensus 90 w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~ 162 (301)
||+.+.+-.. ...+.....-.+++ .-++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+
T Consensus 95 ~d~~~~~W~~------~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 95 YNPMTNQWSP------CAPMSVPRNRIGVG-VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp EETTTTEEEE------CCCCSSCCBTCEEE-EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ECCCCCeEeE------CCCCCcCccccEEE-EECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 8876654211 11111111111222 2267777777643 468889987654322 12111112222222
Q ss_pred cCCCcEEEEEeCC-----CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCc-----ceEEEEEcc
Q 022184 163 SLDSEFLATTSTD-----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK-----ALLAVYDIS 232 (301)
Q Consensus 163 ~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~d~~ 232 (301)
++++++.|+.+ ..+.+||+.+.+-...-..+....-.+++.. +++ + .+.++.+ ..+.+||+.
T Consensus 168 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i----yv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 168 --NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNC-I----YAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp --TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE-E----EEECCBCSSSBCCCEEEEETT
T ss_pred --CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCE-E----EEEeCCCCCCccceEEEEeCC
Confidence 57777777754 4588999887654332111111111122222 333 2 2334332 568999987
Q ss_pred CceEe--eeeeccCCCcEEEEEcCCCCEEEEeeCC-----CcEEEEeCCCceee
Q 022184 233 TWNKI--GHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEIN 279 (301)
Q Consensus 233 ~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~ 279 (301)
+.+-. ..+.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 240 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 240 TETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 75432 222211122222222 67788888754 45889999876544
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.97 E-value=0.0073 Score=52.51 Aligned_cols=189 Identities=8% Similarity=-0.010 Sum_probs=117.6
Q ss_pred eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeCCCcceecccccCCc
Q 022184 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSLRIILDEPKAHK 155 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~ 155 (301)
+|+.+ ....|+..++++...... ..+..-..+..++|++.+..|+.+ ..++.|+.+++..............
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~------~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVA------IPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEE------CCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEE-eCCcEEEEECCCCCcceE------EEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 45554 456688888876542111 111223467899999966666554 4578899998865433222222224
Q ss_pred cEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc
Q 022184 156 SVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234 (301)
Q Consensus 156 ~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 234 (301)
....+++.+.+. ++++-...+.|.+.++........+.. .-.....+++.|....+|. .--+..+.|...++...
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~-~l~~P~~iavdp~~G~lY~---tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK-DLDSPRALALDPAEGFMYW---TEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECS-SCCCEEEEEEETTTTEEEE---EECSSSCEEEEEETTSC
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC-CCCCcccEEEccCCCeEEE---eCCCCCCEEEEEeCCCC
Confidence 567888887655 445555667899999875543333322 2335789999997665331 22234678888888754
Q ss_pred eEeeeeeccCCCcEEEEEcCCCCEEEEee-CCCcEEEEeCCCce
Q 022184 235 NKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKME 277 (301)
Q Consensus 235 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~ 277 (301)
.... +...-.....++++++++.|+.+. ..+.|..+++....
T Consensus 157 ~~~~-l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 157 ERTT-LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp SCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ceEE-EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 4322 222345678999999877777664 45789999987543
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.96 E-value=0.0037 Score=48.84 Aligned_cols=201 Identities=12% Similarity=0.103 Sum_probs=121.9
Q ss_pred eEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc-c
Q 022184 67 MTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL-R 145 (301)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~-~ 145 (301)
.+.-.+|..+.+|.-. ..++++||+++.+.... ..-...|..-.|-. .+.|+..+ +..|+-|++... .
T Consensus 70 dsAIMnP~~~ViALra-g~~LQiFnletK~klks--------~~~~e~VvfWkWis-~~~L~lVT-~taVyHWs~~~~s~ 138 (365)
T 2xzh_A 70 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKA--------HTMTDDVTFWKWIS-LNTVALVT-DNAVYHWSMEGESQ 138 (365)
T ss_dssp SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEE--------EECSSCEEEEEECS-SSEEEEEE-SSEEEEEESSTTCC
T ss_pred ceeeeCCCccEEEEec-CCeEEEechHHhhhhcc--------eecCCccEEEEecC-CCeEEEEc-CCcEEEEcccCCCC
Confidence 3455688888777654 67899999988765222 12234666666654 34566665 567999999743 3
Q ss_pred eecccccCC----ccEEEEEecCCCcEEEEEeC-------CCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCc--c
Q 022184 146 IILDEPKAH----KSVLDMDFSLDSEFLATTST-------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK--P 212 (301)
Q Consensus 146 ~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~ 212 (301)
+.+.+..|. ..|..-..+++.++++..+- .|.+.+|..+.+. .+.+.+|. ..-..+-.+|.. .
T Consensus 139 P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGha---a~F~~~~~~g~~~~~ 214 (365)
T 2xzh_A 139 PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHA---ASFAQFKMEGNAEES 214 (365)
T ss_dssp CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSE---EEEEEECCTTCSSCE
T ss_pred CceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeee---eeeEEEecCCCCCCc
Confidence 333333332 36777778889997765542 3678899876543 33444331 122233333321 1
Q ss_pred eEEEEEEe-CCcceEEEEEccCc---eE------eeeeec---cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceee
Q 022184 213 FLFCTVQR-GDKALLAVYDISTW---NK------IGHKRL---LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEIN 279 (301)
Q Consensus 213 ~~~~~~~~-~~~~~i~~~d~~~~---~~------~~~~~~---~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~ 279 (301)
.+++++.. ...+.+++.++... .+ +..+.. ..+-..++..|+.-..++.-+.-|.|++||++++.++
T Consensus 215 ~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 215 TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp EEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 23333333 23368999998542 11 111111 1234567788888888999999999999999999887
Q ss_pred ccc
Q 022184 280 HWS 282 (301)
Q Consensus 280 ~~~ 282 (301)
...
T Consensus 295 ~~n 297 (365)
T 2xzh_A 295 YMN 297 (365)
T ss_dssp EEE
T ss_pred EEe
Confidence 754
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.96 E-value=0.0023 Score=50.15 Aligned_cols=235 Identities=14% Similarity=0.111 Sum_probs=112.5
Q ss_pred ccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC-----CcEEEEEEc
Q 022184 19 VNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN-----GGCKLFEVY 93 (301)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~~w~~~ 93 (301)
..++++|+.... ..-.++.+++....+...+........| ..+.+ ++..++.|+.+ ..+.+||..
T Consensus 16 ~~i~v~GG~~~~----~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~ 85 (302)
T 2xn4_A 16 KLMVVVGGQAPK----AIRSVECYDFKEERWHQVAELPSRRCRA----GMVYM--AGLVFAVGGFNGSLRVRTVDSYDPV 85 (302)
T ss_dssp EEEEEECCBSSS----BCCCEEEEETTTTEEEEECCCSSCCBSC----EEEEE--TTEEEEESCBCSSSBCCCEEEEETT
T ss_pred CEEEEECCCCCC----CCCcEEEEcCcCCcEeEcccCCcccccc----eEEEE--CCEEEEEeCcCCCccccceEEECCC
Confidence 356777774321 1123566666665554322111111111 12222 56666777654 357788876
Q ss_pred CCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC-----eEEEEeCCCcceec--ccccCCccEEEEEecCCC
Q 022184 94 GGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG-----HLRIMHWPSLRIIL--DEPKAHKSVLDMDFSLDS 166 (301)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~ 166 (301)
+.+-.. . ..+.....-.+++ ..++++++.|+.++ .+.+||+.+.+-.. .+.........+.+ ++
T Consensus 86 ~~~W~~--~----~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~ 156 (302)
T 2xn4_A 86 KDQWTS--V----ANMRDRRSTLGAA-VLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GG 156 (302)
T ss_dssp TTEEEE--E----CCCSSCCBSCEEE-EETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT
T ss_pred CCceee--C----CCCCccccceEEE-EECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CC
Confidence 654211 1 1111111111222 23677777777553 57788887654321 12111111222222 56
Q ss_pred cEEEEEeCC-------CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCc-----ceEEEEEccCc
Q 022184 167 EFLATTSTD-------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK-----ALLAVYDISTW 234 (301)
Q Consensus 167 ~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~~ 234 (301)
+.++.|+.+ ..+.+||+.+.+-...-..+....-.+++.. +++. .+.++.+ ..+.+||+.+.
T Consensus 157 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i-----yv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 157 LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLL-----YAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEE-----EEECCBSSSSBCCCEEEEETTTT
T ss_pred EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEE-----EEECCCCCCcccceEEEEeCCCC
Confidence 777777643 3588999887654433221111111122222 3332 2334432 46889998765
Q ss_pred eE--eeeeeccCCCcEEEEEcCCCCEEEEeeCCC-----cEEEEeCCCceeec
Q 022184 235 NK--IGHKRLLRKPASVLSISLDGKYLAMGSKDG-----DICVVDVKKMEINH 280 (301)
Q Consensus 235 ~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----~i~i~~~~~~~~~~ 280 (301)
+- +............+. -++++++.|+.++ .+.+||+.+.+...
T Consensus 231 ~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 231 AWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp EEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 43 222221111222222 3677888887653 48999998876443
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.91 E-value=0.0027 Score=50.83 Aligned_cols=159 Identities=12% Similarity=0.090 Sum_probs=90.0
Q ss_pred cCCeEEEEeCCCc--ce-eccccc-----CCccEEEEEecC--CCc-EEEEE-eC--CCcEEEEeCCCCce----EEEEe
Q 022184 132 VDGHLRIMHWPSL--RI-ILDEPK-----AHKSVLDMDFSL--DSE-FLATT-ST--DGSARIWKTEDGVA----WTFLT 193 (301)
Q Consensus 132 ~dg~i~v~d~~~~--~~-~~~~~~-----~~~~i~~~~~~~--~~~-~l~~~-~~--d~~i~i~d~~~~~~----~~~~~ 193 (301)
.+|.|.++|+++. +. ...+.+ ..-....+.+.+ +++ +|+.+ .. +.+|.+|++..... +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999998732 21 112222 112566777755 454 34444 33 46788888765322 22333
Q ss_pred ecCCCCeeEEEEccCCCcceEEEEEEeC-----------------CcceEEEEEccCceEeeeeeccCCCcEEEEEcCCC
Q 022184 194 RNSDEKIELCRFSKDGTKPFLFCTVQRG-----------------DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDG 256 (301)
Q Consensus 194 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 256 (301)
...-...+.+.+.++|.. .++.. ..+.|..+|..+-+ .....-...+.++||||+
T Consensus 161 g~~~~~pND~~v~~~G~f-----yvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~---~~~~~l~~pNGia~spDg 232 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHF-----YATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVR---VVAEGFDFANGINISPDG 232 (355)
T ss_dssp CTTCSSEEEEEEEETTEE-----EEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCE---EEEEEESSEEEEEECTTS
T ss_pred cCCCCCCceEEEeCCCCE-----EecCCcEeCCcccccchhhccCCccEEEEEECCeEE---EeecCCcccCcceECCCC
Confidence 333345789999999984 12221 23566666653221 222222456889999999
Q ss_pred CEEEEee-CCCcEEEEeCCC-ceee--ccccccccCccEEEEEEcc-CCC
Q 022184 257 KYLAMGS-KDGDICVVDVKK-MEIN--HWSKRLHLGTSIALVEFCP-TQR 301 (301)
Q Consensus 257 ~~l~~~~-~d~~i~i~~~~~-~~~~--~~~~~~~~~~~v~~~~~sp-dg~ 301 (301)
+.|+++. ..+.|..|++.. ++.. +.+ . . .+....++..+ +|+
T Consensus 233 ~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~-~-~g~PDGi~vD~e~G~ 279 (355)
T 3sre_A 233 KYVYIAELLAHKIHVYEKHANWTLTPLRVL-S-F-DTLVDNISVDPVTGD 279 (355)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEE-E-C-SSEEEEEEECTTTCC
T ss_pred CEEEEEeCCCCeEEEEEECCCCcEecCEEE-e-C-CCCCceEEEeCCCCc
Confidence 8888775 467899999863 3221 122 1 1 34566677776 363
No 312
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.85 E-value=0.0017 Score=52.63 Aligned_cols=149 Identities=13% Similarity=0.131 Sum_probs=90.7
Q ss_pred CCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceec---
Q 022184 72 NPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL--- 148 (301)
Q Consensus 72 ~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~--- 148 (301)
..+|..++.+ .++.||.-++.... ..+... .+..-.-..+..+..||+|++||..+ +..|.|..++.+....
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~-~Yk~L~--~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDS-LYHSLN--FSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCS-SCEEEE--CTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCC-cceEEe--cCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc
Confidence 4466666665 45667777776432 111111 11000123567899999999999887 5679998887322100
Q ss_pred ---------cccc------CCccEEEEEecCC---CcEEEEEeCCCcEEEEeCCCC--ceEEEEeec--------CCCCe
Q 022184 149 ---------DEPK------AHKSVLDMDFSLD---SEFLATTSTDGSARIWKTEDG--VAWTFLTRN--------SDEKI 200 (301)
Q Consensus 149 ---------~~~~------~~~~i~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~--------~~~~v 200 (301)
.+.- ...+|..+.|+|- +..|++-..|+.|++||+... ++. .+... ....+
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 1110 2357999999994 458999999999999999852 222 23211 11358
Q ss_pred eEEEEccCCCcceEEEEEEeCCcceEEEE
Q 022184 201 ELCRFSKDGTKPFLFCTVQRGDKALLAVY 229 (301)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (301)
.+++|.+++-.+| +++....|.|+-.
T Consensus 183 ~S~~Fg~~~lTLY---vl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLY---CLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEE---EEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEE---EEecCCCCCEEEE
Confidence 8999999765533 3445566767643
No 313
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.82 E-value=0.0071 Score=47.65 Aligned_cols=221 Identities=14% Similarity=0.112 Sum_probs=107.0
Q ss_pred eEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec----C-------CcEEEEEEcCCccccccccccC
Q 022184 38 EIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT----N-------GGCKLFEVYGGATDINLLAKKM 106 (301)
Q Consensus 38 ~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----d-------~~i~~w~~~~~~~~~~~~~~~~ 106 (301)
.++.||+....+... .+..............+++.++.|+. + ..+..||..+.+- .. .
T Consensus 14 ~~~~yd~~~~~W~~~-----~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~~----~ 82 (315)
T 4asc_A 14 GAVAYDPAANECYCA-----SLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW--LG----M 82 (315)
T ss_dssp EEEEEETTTTEEEEE-----ECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--EE----C
T ss_pred ceEEECCCCCeEecC-----CCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE--EE----C
Confidence 577888887776431 11111222333334457777777773 1 1256677665542 11 1
Q ss_pred CCCCCCCCeeEEEEeeCCCEEEEeecC--------CeEEEEeCCCcceec--ccccCCccEEEEEecCCCcEEEEEeC-C
Q 022184 107 PPLQDAGPQKCLSFSVDGSRFAAGGVD--------GHLRIMHWPSLRIIL--DEPKAHKSVLDMDFSLDSEFLATTST-D 175 (301)
Q Consensus 107 ~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~-d 175 (301)
..+.....-.+++ .-++++++.|+.+ ..+.+||..+.+-.. .+.........+. -+++.++.|+. +
T Consensus 83 ~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~ 159 (315)
T 4asc_A 83 PPLPSPRCLFGLG-EALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGS 159 (315)
T ss_dssp CCBSSCEESCEEE-EETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCT
T ss_pred CCCCcchhceeEE-EECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCC
Confidence 1111111111122 2266777777742 458889987754321 1211111112222 35677777776 2
Q ss_pred -----CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCC-----cceEEEEEccCceE--eeeeecc
Q 022184 176 -----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD-----KALLAVYDISTWNK--IGHKRLL 243 (301)
Q Consensus 176 -----~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~d~~~~~~--~~~~~~~ 243 (301)
..+.+||+.+.+-...-..+....-.+++.. +++ ++ +.++. -..+.+||+.+.+- +......
T Consensus 160 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iy----v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 233 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGR-II----VAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQE 233 (315)
T ss_dssp TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE-EE----EEEEECSSSEEEEEEEEETTTTEEEEECCCSSC
T ss_pred CCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCE-EE----EEeccCCCCccceEEEEECCCCeEEECCCCCCc
Confidence 3688999887654332211111111122222 333 22 22322 23688899877543 2222211
Q ss_pred CCCcEEEEEcCCCCEEEEeeCC--------------CcEEEEeCCCceeec
Q 022184 244 RKPASVLSISLDGKYLAMGSKD--------------GDICVVDVKKMEINH 280 (301)
Q Consensus 244 ~~~v~~~~~s~~~~~l~~~~~d--------------~~i~i~~~~~~~~~~ 280 (301)
......+.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 234 r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 234 RSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEG 282 (315)
T ss_dssp CBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEE
T ss_pred ccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhh
Confidence 222222333 66777777753 247889998775443
No 314
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.69 E-value=0.0069 Score=47.42 Aligned_cols=144 Identities=9% Similarity=-0.009 Sum_probs=85.5
Q ss_pred EEEEeeCCCEEEEeecC--------------CeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEe--CCC--cE
Q 022184 117 CLSFSVDGSRFAAGGVD--------------GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS--TDG--SA 178 (301)
Q Consensus 117 ~~~~s~~~~~l~~~~~d--------------g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~--~i 178 (301)
+--+++++.+|+.+... ..|+..++...+.. .+... . ...|++++++|+-.. .++ .|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDPD--P--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEECS--C--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-EeecC--C--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34568899998877653 46777777665432 22221 1 236778888888765 333 45
Q ss_pred EEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCE
Q 022184 179 RIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKY 258 (301)
Q Consensus 179 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 258 (301)
...++... ....+..+. + .+++++++.++ .+.....+|...++..+....... +... ..++|++.+
T Consensus 132 y~~~~dGs-~~~~lt~~~---~--~~~~~~g~~iy----~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~ 197 (302)
T 3s25_A 132 YRIRIDGE-EKKKIKNHY---L--FTCNTSDRYFY----YNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTN 197 (302)
T ss_dssp EEEETTSC-CCEEEESSC---C--CCSEEETTEEE----EECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTE
T ss_pred EEEECCCC-CeEEEeCCC---c--eEeeEECCEEE----EEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCE
Confidence 55566533 334444322 2 35678888743 334456789999987765443222 2222 346699988
Q ss_pred EEEeeCC--CcEEEEeCCCceee
Q 022184 259 LAMGSKD--GDICVVDVKKMEIN 279 (301)
Q Consensus 259 l~~~~~d--~~i~i~~~~~~~~~ 279 (301)
|+..... ..|..-++......
T Consensus 198 iy~t~~~~~~~I~~~~ldG~~~~ 220 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNPNPV 220 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSCCCE
T ss_pred EEEEEcCCCcEEEEEECCCCCeE
Confidence 8877544 35777777665533
No 315
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.65 E-value=0.015 Score=46.38 Aligned_cols=230 Identities=13% Similarity=0.090 Sum_probs=116.9
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeC---CCEEEEe---ecCCeE
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAG---GVDGHL 136 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~---~~dg~i 136 (301)
-.....|+|.|+|+.+++-...|.|++++..++.... +................++++|+ +..|... ..++.|
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~-v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE-LGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEee-ecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 4467899999999877765448888888754433211 11000111234567899999995 3444432 234556
Q ss_pred EEEeCCCc----------ceec-cccc-CCccEEEEEecCCCcEEEEEeC-------------CCcEEEEeCCCCc----
Q 022184 137 RIMHWPSL----------RIIL-DEPK-AHKSVLDMDFSLDSEFLATTST-------------DGSARIWKTEDGV---- 187 (301)
Q Consensus 137 ~v~d~~~~----------~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~---- 187 (301)
.-|.+..+ +.+. .+.. .......|+|.|||.++++.+. .|.|.-.+....-
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 66655431 1111 1111 1113456999999987777542 2444444443210
Q ss_pred ---eEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE------------------eeeeeccCCC
Q 022184 188 ---AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK------------------IGHKRLLRKP 246 (301)
Q Consensus 188 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------------------~~~~~~~~~~ 246 (301)
....+...+. ....++|+|+|.. + ..-.+.++.=.|--+..+.. +..+..+...
T Consensus 190 Pf~~~~i~a~G~R-Np~Gla~dp~G~L-~---~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 190 PFPGSPVYSYGHR-NVQGLAWDDKQRL-F---ASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp SSTTCCEEEBCCS-BCCEEEECTTCCE-E---EEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred CCCCCeEEeeCCC-CcceEEECCCCCE-E---EEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 1122322332 3678999998763 2 12223332111211121111 1111111124
Q ss_pred cEEEEEcCCCCEEEEeeCCCcEEEEeCCCceee---ccccccccCccEEEEEEccCC
Q 022184 247 ASVLSISLDGKYLAMGSKDGDICVVDVKKMEIN---HWSKRLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 247 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~---~~~~~~~~~~~v~~~~~spdg 300 (301)
...++|. +|..+...-..+.|....+...... ..+.... ...+..++..|||
T Consensus 265 p~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~-~gR~~dv~~~pDG 319 (347)
T 3das_A 265 PSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGE-YGRLRTVAPAGGD 319 (347)
T ss_dssp EEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTT-SSCEEEEEEEETT
T ss_pred CcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCC-CCCccEEEECCCC
Confidence 4567776 3555555555567777776654321 1121222 4679999999998
No 316
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.64 E-value=0.0074 Score=49.01 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=76.2
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccc-------cc--cccCC--CCCCCCCeeEEEEee---CCCEEEE
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDIN-------LL--AKKMP--PLQDAGPQKCLSFSV---DGSRFAA 129 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~-------~~--~~~~~--~~~~~~~v~~~~~s~---~~~~l~~ 129 (301)
+.|..+..+|+|++||..+. ..|.|-.+..+..... +. .-... ......+|..+.|+| .+..|++
T Consensus 66 ~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 66 DDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp CTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred CceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 46888999999999998754 4699999884321111 00 00011 111357899999999 4678999
Q ss_pred eecCCeEEEEeCCCcce-ecccc---------cCCccEEEEEecCCCcEEEEEe--CCCcEEEE
Q 022184 130 GGVDGHLRIMHWPSLRI-ILDEP---------KAHKSVLDMDFSLDSEFLATTS--TDGSARIW 181 (301)
Q Consensus 130 ~~~dg~i~v~d~~~~~~-~~~~~---------~~~~~i~~~~~~~~~~~l~~~~--~d~~i~i~ 181 (301)
-..|+.|++||+..... ...+. .....|.+++|.+++-.|...+ ++|.|+-.
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999999975221 00111 1114688999999776666644 77776543
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.61 E-value=0.015 Score=45.53 Aligned_cols=227 Identities=11% Similarity=0.062 Sum_probs=131.5
Q ss_pred CceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCC
Q 022184 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGP 114 (301)
Q Consensus 35 ~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 114 (301)
..++|++++...+-. ...+ ...|.-=.|-.+ +.|+..+ +..|+-|++++...+.+...+. ..+. ...
T Consensus 87 ~~LQiFnletK~klk------s~~~---~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~-~~L~-~~Q 153 (365)
T 2xzh_A 87 KTLQIFNIEMKSKMK------AHTM---TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRH-SSLA-GCQ 153 (365)
T ss_dssp TEEEEEETTTTEEEE------EEEC---SSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECC-GGGT-TCE
T ss_pred CeEEEechHHhhhhc------ceec---CCccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecc-hhcc-cce
Confidence 456777776544211 1122 356777777644 3455544 4559999998765555544432 2221 356
Q ss_pred eeEEEEeeCCCEEEEee-------cCCeEEEEeCCCcceecccccCCccEEEEEecC--C-CcEEEEEeC---CCcEEEE
Q 022184 115 QKCLSFSVDGSRFAAGG-------VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSL--D-SEFLATTST---DGSARIW 181 (301)
Q Consensus 115 v~~~~~s~~~~~l~~~~-------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~l~~~~~---d~~i~i~ 181 (301)
|..-..+++.++++..+ -.|.+.+|..+.+.. +.+++|......+...- . .+.|+.+.. .+++++-
T Consensus 154 IInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIi 232 (365)
T 2xzh_A 154 IINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 232 (365)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-ceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEE
Confidence 66667778888876543 237788998865543 44555544433332221 1 123444433 2578888
Q ss_pred eCCCC---c-----eEEEEeecC---CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEE
Q 022184 182 KTEDG---V-----AWTFLTRNS---DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVL 250 (301)
Q Consensus 182 d~~~~---~-----~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~ 250 (301)
++... . ....+..+. ..-.-++..++.... +..-+.-|.|++||++++.++..-+.....|...
T Consensus 233 Ei~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygv-----iyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 233 EVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-----VFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 307 (365)
T ss_dssp ECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTE-----EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCE-----EEEEeCCcEEEEEEcccCcEEEEeccCCCceEEe
Confidence 87432 1 111111111 112345555555554 3344567899999999999998777777787766
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCceeec
Q 022184 251 SISLDGKYLAMGSKDGDICVVDVKKMEINH 280 (301)
Q Consensus 251 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~ 280 (301)
+-+.+..-++.....|.|.--.++....+.
T Consensus 308 a~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivp 337 (365)
T 2xzh_A 308 APHEATAGIIGVNRKGQVLSVCVEEENIIP 337 (365)
T ss_dssp EEEGGGTEEEEEETTCEEEEEEECTTTHHH
T ss_pred cccCCCCcEEEEcCCCEEEEEEECcccEeh
Confidence 666555556666688888877777655443
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.61 E-value=0.0018 Score=47.52 Aligned_cols=143 Identities=11% Similarity=-0.050 Sum_probs=80.9
Q ss_pred CCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCcc--------EEEEEecCCCcEEEEEeCCCcEEEEeCC
Q 022184 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS--------VLDMDFSLDSEFLATTSTDGSARIWKTE 184 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 184 (301)
..+..++|+|+|.+.++ .+|.++-.+..+..... ....... ...+.|.|+|.+.++ .||.|.-++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~-W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN-WMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC-HHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccc-ccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 36779999999986666 67887777765432211 1111122 478899999987777 56888877753
Q ss_pred CCceE------EEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE------eeeee-ccCCCcEEEE
Q 022184 185 DGVAW------TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK------IGHKR-LLRKPASVLS 251 (301)
Q Consensus 185 ~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~~~~-~~~~~v~~~~ 251 (301)
+.... ..+-...=..+..+.|.|+|.. .+.. ++.+.-....+... ...+. ..-...+.+.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~L------yav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~ 188 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYL------YAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLF 188 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCE------EEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEE
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceE------EEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEE
Confidence 32111 1111111124789999999984 4444 66654332221110 00111 1112334567
Q ss_pred EcCCCCEEEEeeCCCcEE
Q 022184 252 ISLDGKYLAMGSKDGDIC 269 (301)
Q Consensus 252 ~s~~~~~l~~~~~d~~i~ 269 (301)
|.|++.+.++. ++.++
T Consensus 189 f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 189 FSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp ECTTSCEEEEE--TTEEE
T ss_pred ECCCCcEEEEe--CCeEE
Confidence 89999877776 66443
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.61 E-value=0.018 Score=46.26 Aligned_cols=59 Identities=7% Similarity=-0.050 Sum_probs=36.0
Q ss_pred CeeEEEEccC-------CCcceEEEEEEeCCcceEEEEEccCceEeeee---eccCCCcEEEEEcCCCCEEEEe
Q 022184 199 KIELCRFSKD-------GTKPFLFCTVQRGDKALLAVYDISTWNKIGHK---RLLRKPASVLSISLDGKYLAMG 262 (301)
Q Consensus 199 ~v~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~ 262 (301)
.+..++|.+. +.. +++.-..+.|...++..++..... ......+..+++.|||.++++.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l-----~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKL-----FIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEE-----EEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred CcceeEEECCccCcccCCcE-----EEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 3566777642 332 344456678888887765433221 1223578999999999865543
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.55 E-value=0.0022 Score=47.09 Aligned_cols=109 Identities=10% Similarity=-0.032 Sum_probs=63.0
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCC--CCCCeeEEEEeeCCCEEEEeecCCeEEEEeC
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQ--DAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW 141 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~ 141 (301)
..+..++|+|+|.+.++ .+|.++-.+..+... .........+. .-....++.|.|+|.+.++ .||.|+-++-
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~--~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN--DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTT--CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCc--ccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 36789999999986655 667544444322211 11110000000 0012478899999987777 5699988876
Q ss_pred CCcceecc------c-ccCCccEEEEEecCCCcEEEEEeCCCcEEE
Q 022184 142 PSLRIILD------E-PKAHKSVLDMDFSLDSEFLATTSTDGSARI 180 (301)
Q Consensus 142 ~~~~~~~~------~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 180 (301)
.+.....- + ...-..+..|.+.|+|.+.+.. |+.++-
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 44222111 1 0111478999999999877766 677543
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.52 E-value=0.013 Score=47.01 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=30.9
Q ss_pred eEEEEEccCce--EeeeeeccCCCcEEEEEcCCCCEEEEeeCCC------cEEEEeCCCceeecccc
Q 022184 225 LLAVYDISTWN--KIGHKRLLRKPASVLSISLDGKYLAMGSKDG------DICVVDVKKMEINHWSK 283 (301)
Q Consensus 225 ~i~~~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~------~i~i~~~~~~~~~~~~~ 283 (301)
.+.+||+.+.+ .+..+......-.+ ...++++++.|+.++ .|.++++++++......
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 57789987543 33333222222222 334778888888653 46677888887666543
No 322
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.48 E-value=0.027 Score=45.18 Aligned_cols=230 Identities=13% Similarity=0.027 Sum_probs=114.5
Q ss_pred eEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcc-eeeeCCceeccccccCCcceEEEECCC---CCeEEEEe
Q 022184 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTT-SVYTSPLVTYVFDESEGDPMTIAVNPS---GDDFVCST 82 (301)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~ 82 (301)
...++|.|+ ++++++-. .+ +|+.++..+. .+...+ ...........|+++|+ +..|..+.
T Consensus 31 P~~ia~~pd---G~l~V~e~-------~g--~I~~~d~~G~~~~~~~~----v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 31 PWSIAPLGG---GRYLVTER-------PG--RLVLISPSGKKLVASFD----VANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEEEEEET---TEEEEEET-------TT--EEEEECSSCEEEEEECC----CCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CeEEEEcCC---CeEEEEeC-------CC--EEEEEeCCCceEeeccc----eeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 467889987 45555422 23 4555554432 111111 11222456889999997 45555443
Q ss_pred c----C----CcEEEEEEcCCccc----cccccccCCCCCCCCCeeEEEEeeCCCEEEEeec-------------CCeEE
Q 022184 83 T----N----GGCKLFEVYGGATD----INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-------------DGHLR 137 (301)
Q Consensus 83 ~----d----~~i~~w~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~ 137 (301)
. + ..|..|+....... ..+.........| ....++|.|||.+.++.+. .|.|.
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ 172 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKIL 172 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEE
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEE
Confidence 3 2 56777777654110 1111100111112 2467999999987666432 24565
Q ss_pred EEeCCCcce--------ecccccCCccEEEEEecC-CCcEEEEEeCCC---cEEEEeCCCCc------------------
Q 022184 138 IMHWPSLRI--------ILDEPKAHKSVLDMDFSL-DSEFLATTSTDG---SARIWKTEDGV------------------ 187 (301)
Q Consensus 138 v~d~~~~~~--------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~---~i~i~d~~~~~------------------ 187 (301)
-++.. ++. ...+.........++|+| +++++++-.... .|.+.. .+.
T Consensus 173 ri~~d-G~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~ 249 (354)
T 3a9g_A 173 RVDEE-GRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVD 249 (354)
T ss_dssp EECTT-SCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCC
T ss_pred EEcCC-CCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcC
Confidence 55543 221 011111223456899999 666555433221 233322 111
Q ss_pred eEEEEeecCCCCeeEEEEc-------cCCCcceEEEEEEeCCcceEEEEEccCc-eEe--eeee-ccCCCcEEEEEcCCC
Q 022184 188 AWTFLTRNSDEKIELCRFS-------KDGTKPFLFCTVQRGDKALLAVYDISTW-NKI--GHKR-LLRKPASVLSISLDG 256 (301)
Q Consensus 188 ~~~~~~~~~~~~v~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~--~~~~-~~~~~v~~~~~s~~~ 256 (301)
++..+. +....+..++|. .+|.. +++.-..+.|...++... +.. ..+. .....+..+++.|||
T Consensus 250 p~~~~~-~~~~ap~G~~~y~g~~fp~~~G~l-----~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG 323 (354)
T 3a9g_A 250 PVIDTG-SETWAPSGASFVHGDMFPGLRGWL-----LIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG 323 (354)
T ss_dssp CSEECT-TCCCCEEEEEECCSSSCGGGTTEE-----EEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS
T ss_pred CEeecC-CCCcCCcceEEECCCCCcccCCcE-----EEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC
Confidence 111110 112246778884 34443 344555678888887753 221 1221 223568899999999
Q ss_pred CEEEEee
Q 022184 257 KYLAMGS 263 (301)
Q Consensus 257 ~~l~~~~ 263 (301)
.+.++..
T Consensus 324 ~lyv~~~ 330 (354)
T 3a9g_A 324 GILISTS 330 (354)
T ss_dssp CEEEEEC
T ss_pred cEEEEEe
Confidence 7666553
No 323
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.47 E-value=0.024 Score=45.19 Aligned_cols=144 Identities=8% Similarity=-0.001 Sum_probs=83.5
Q ss_pred CccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee-----cCCCCeeEEEEccC---CCcceEEEEEEeCCcce
Q 022184 154 HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR-----NSDEKIELCRFSKD---GTKPFLFCTVQRGDKAL 225 (301)
Q Consensus 154 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~ 225 (301)
-...+.++|.|||+++++--..|.|++++...++....... ........++++|+ ...+|+ ..+...+..
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv--~yt~~~~~~ 108 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA--YFTSASDNR 108 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE--EEECSSSEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEE--EEecCCCCE
Confidence 34678999999999777765589999998766554222111 12334789999996 343332 234345566
Q ss_pred EEEEEccCc----------eEe-eeee-ccCCCcEEEEEcCCCCEEEEeeC-------------CCcEEEEeCCCce---
Q 022184 226 LAVYDISTW----------NKI-GHKR-LLRKPASVLSISLDGKYLAMGSK-------------DGDICVVDVKKME--- 277 (301)
Q Consensus 226 i~~~d~~~~----------~~~-~~~~-~~~~~v~~~~~s~~~~~l~~~~~-------------d~~i~i~~~~~~~--- 277 (301)
|.-|..... +.+ ..+. ...+....+.|.|||.+.++.+. .|.|.-++....-
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 777766541 111 1121 12234567999999987766542 3556666654320
Q ss_pred ----eeccccccccCccEEEEEEccCCC
Q 022184 278 ----INHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 278 ----~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
....+..+| .....++|+|+|+
T Consensus 189 nPf~~~~i~a~G~--RNp~Gla~dp~G~ 214 (347)
T 3das_A 189 NPFPGSPVYSYGH--RNVQGLAWDDKQR 214 (347)
T ss_dssp CSSTTCCEEEBCC--SBCCEEEECTTCC
T ss_pred CCCCCCeEEeeCC--CCcceEEECCCCC
Confidence 011121233 2356889999874
No 324
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.39 E-value=0.04 Score=45.01 Aligned_cols=226 Identities=12% Similarity=0.063 Sum_probs=133.3
Q ss_pred CceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCC
Q 022184 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGP 114 (301)
Q Consensus 35 ~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 114 (301)
..++|++++...+-. ...+ ...|.-=.|-.+ +.|+..+ +..|+-|++++...+.+...+. ..+ ....
T Consensus 86 ~~lQiFnle~K~klk------s~~~---~e~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR~-~~L-~~~Q 152 (494)
T 1bpo_A 86 KTLQIFNIEMKSKMK------AHTM---TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRH-SSL-AGCQ 152 (494)
T ss_dssp TEEEEEETTTTEEEE------EEEC---SSCCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEECC-GGG-TTCE
T ss_pred CeEEEEchHHhhhhc------ceec---CCCceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhheecc-hhc-ccce
Confidence 456777766543211 1112 345767777543 3455543 4569999998755555544432 222 1356
Q ss_pred eeEEEEeeCCCEEEEee-------cCCeEEEEeCCCcceecccccCCccEEEEEecCC---CcEEEEEeCC---CcEEEE
Q 022184 115 QKCLSFSVDGSRFAAGG-------VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLD---SEFLATTSTD---GSARIW 181 (301)
Q Consensus 115 v~~~~~s~~~~~l~~~~-------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d---~~i~i~ 181 (301)
|..-.-+++.++++..+ -.|.+.+|..+.+.. +.+.+|......+...-+ .+.++.+... +.++|.
T Consensus 153 IInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~ 231 (494)
T 1bpo_A 153 IINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 231 (494)
T ss_dssp EEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEE
T ss_pred EEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEE
Confidence 66677788888876443 247888998876543 455666554444433221 1244444432 678888
Q ss_pred eCCCC---c-----eEEEEeecC---CCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEE
Q 022184 182 KTEDG---V-----AWTFLTRNS---DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVL 250 (301)
Q Consensus 182 d~~~~---~-----~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~ 250 (301)
++... . ....+..+. ..-.-++..++.... +..-..-|.|++||++++.++..-+.....|...
T Consensus 232 Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv-----iyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t 306 (494)
T 1bpo_A 232 EVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-----VFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 306 (494)
T ss_dssp ECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE-----EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE-----EEEEecCceEEEEecccceeeeeecccCCceEEe
Confidence 88532 1 111111111 122445666666554 3344577899999999999998777777777776
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCceee
Q 022184 251 SISLDGKYLAMGSKDGDICVVDVKKMEIN 279 (301)
Q Consensus 251 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~ 279 (301)
+-+....-++.....|.|.--.++....+
T Consensus 307 ~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 307 APHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp EEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred cccCCCCcEEEEccCceEEEEEEccccch
Confidence 66666566666678888877777665444
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.38 E-value=0.032 Score=43.90 Aligned_cols=224 Identities=16% Similarity=0.122 Sum_probs=104.6
Q ss_pred EeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEec----CC-------cEEEEEEcCCccccccccccCC
Q 022184 39 IFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT----NG-------GCKLFEVYGGATDINLLAKKMP 107 (301)
Q Consensus 39 i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----d~-------~i~~w~~~~~~~~~~~~~~~~~ 107 (301)
++.|++....+...+ +..............++..++.|+. ++ .+..||..+.+-. . ..
T Consensus 26 ~~~yd~~~~~W~~~~-----~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~--~----~~ 94 (318)
T 2woz_A 26 AVAYDPMENECYLTA-----LAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV--G----LP 94 (318)
T ss_dssp EEEEETTTTEEEEEE-----ECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEE--E----CS
T ss_pred eEEECCCCCceeccc-----CCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEE--E----CC
Confidence 677788777664411 1111112223333456777777773 12 1566666554321 1 11
Q ss_pred CCCCCCCeeEEEEeeCCCEEEEeecC-------CeEEEEeCCCcceec--ccccCCccEEEEEecCCCcEEEEEeCC---
Q 022184 108 PLQDAGPQKCLSFSVDGSRFAAGGVD-------GHLRIMHWPSLRIIL--DEPKAHKSVLDMDFSLDSEFLATTSTD--- 175 (301)
Q Consensus 108 ~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d--- 175 (301)
.+.....-.+++. -++++++.|+.+ ..+.+||..+.+-.. .+.........+. .++++++.|+.+
T Consensus 95 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 95 PLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDK 171 (318)
T ss_dssp CBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSS
T ss_pred CCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCC
Confidence 1111111112222 267777777754 357888887654322 1111111111222 367777777642
Q ss_pred ---CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeC-CcceEEEEEccCceE--eeeeeccCCCcEE
Q 022184 176 ---GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG-DKALLAVYDISTWNK--IGHKRLLRKPASV 249 (301)
Q Consensus 176 ---~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~--~~~~~~~~~~v~~ 249 (301)
..+.+||+.+.+-...-..+....-.+++.. ++ .++++-..... ....+.+||+.+.+- +............
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KG-KIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL 249 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE
T ss_pred CccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CC-EEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE
Confidence 3589999987754332221111111122222 33 33322111100 124677899876542 2222211122222
Q ss_pred EEEcCCCCEEEEeeCC--------------CcEEEEeCCCceeec
Q 022184 250 LSISLDGKYLAMGSKD--------------GDICVVDVKKMEINH 280 (301)
Q Consensus 250 ~~~s~~~~~l~~~~~d--------------~~i~i~~~~~~~~~~ 280 (301)
+. -++++++.|+.+ ..+.+||+.+.+-..
T Consensus 250 ~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 250 VS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp EE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred EE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 22 356777777653 458899998876443
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.34 E-value=0.034 Score=43.28 Aligned_cols=148 Identities=11% Similarity=0.063 Sum_probs=77.9
Q ss_pred eCCCEEEEeecC-----CeEEEEeCCCcc---e--ecccccCCccEEEEEecCCCcEEEEEeCCC-----cEEEEeCCCC
Q 022184 122 VDGSRFAAGGVD-----GHLRIMHWPSLR---I--ILDEPKAHKSVLDMDFSLDSEFLATTSTDG-----SARIWKTEDG 186 (301)
Q Consensus 122 ~~~~~l~~~~~d-----g~i~v~d~~~~~---~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~ 186 (301)
.++++++.|+.+ ..+.+||+.+.+ - +..+.........+.+ +++.++.|+.++ .+.+||+.+.
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 467777887754 468899987765 2 2222211112222222 577777776543 5889998876
Q ss_pred ceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCC-----cceEEEEEccCceEe--eeeeccCCCcEEEEEcCCCCEE
Q 022184 187 VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD-----KALLAVYDISTWNKI--GHKRLLRKPASVLSISLDGKYL 259 (301)
Q Consensus 187 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l 259 (301)
+-...-..+....-..++. -+++. .+.++. ...+.+||+.+.+-. ..+.........+.+ +++++
T Consensus 139 ~W~~~~~~p~~r~~~~~~~-~~~~i-----yv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~ 210 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVV-ASGVI-----YCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIY 210 (301)
T ss_dssp EEEEEEECSSCCBSCEEEE-ETTEE-----EEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEE
T ss_pred eEEECCCCCCCcccceEEE-ECCEE-----EEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEE
Confidence 6443322222211112222 24432 233433 246889998765432 222111112222222 67777
Q ss_pred EEeeCC-----CcEEEEeCCCceee
Q 022184 260 AMGSKD-----GDICVVDVKKMEIN 279 (301)
Q Consensus 260 ~~~~~d-----~~i~i~~~~~~~~~ 279 (301)
+.|+.+ ..+.+||+.+.+..
T Consensus 211 v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 211 VVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp EECCBCSSSBCCCEEEEETTTTEEE
T ss_pred EEeCCCCCcccceEEEEeCCCCcEE
Confidence 888764 46899999876543
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.20 E-value=0.066 Score=43.74 Aligned_cols=201 Identities=12% Similarity=0.104 Sum_probs=122.2
Q ss_pred eEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc-c
Q 022184 67 MTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL-R 145 (301)
Q Consensus 67 ~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~-~ 145 (301)
.+.-.+|..+.+|.-. ..++++||+++...... ..-...|..-.|-.+ +.|+..+ +..|+-|++... .
T Consensus 69 dsAIMnP~~~iiALra-g~~lQiFnle~K~klks--------~~~~e~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~ 137 (494)
T 1bpo_A 69 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKA--------HTMTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQ 137 (494)
T ss_dssp SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEE--------EECSSCCCEEEEEET-TEEEEEC-SSEEEEEESSSSCC
T ss_pred ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcc--------eecCCCceEEEecCC-CeEEEEc-CCeeEEecccCCCC
Confidence 3566788888777654 77899999988765222 122345666677654 4566555 568999999643 3
Q ss_pred eecccccCC----ccEEEEEecCCCcEEEEEe-------CCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCc--c
Q 022184 146 IILDEPKAH----KSVLDMDFSLDSEFLATTS-------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK--P 212 (301)
Q Consensus 146 ~~~~~~~~~----~~i~~~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~ 212 (301)
+.+.+..|. ..|..-..+++.++++..+ -.|.+.+|..+.+. .+.+.+|. ..-..+-.+|.. .
T Consensus 138 P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGha---a~F~~~~~~g~~~~~ 213 (494)
T 1bpo_A 138 PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHA---ASFAQFKMEGNAEES 213 (494)
T ss_dssp CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSE---EEEEEEECTTCSSEE
T ss_pred chhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeee---eeeEEEecCCCCCCc
Confidence 333333332 3677778889999877544 23678899876543 23343331 112223223221 1
Q ss_pred eEEEEEEe-CCcceEEEEEccCc---eE------eeeeec---cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceee
Q 022184 213 FLFCTVQR-GDKALLAVYDISTW---NK------IGHKRL---LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEIN 279 (301)
Q Consensus 213 ~~~~~~~~-~~~~~i~~~d~~~~---~~------~~~~~~---~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~ 279 (301)
.+++++.. ...+.+++.++... .. +..+.. ..+-..++..|+.-..++.-+.-|.|++||+.++..+
T Consensus 214 ~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp EEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceee
Confidence 23333332 22478999988542 11 111111 1234567888888888999999999999999999887
Q ss_pred ccc
Q 022184 280 HWS 282 (301)
Q Consensus 280 ~~~ 282 (301)
..-
T Consensus 294 ~~n 296 (494)
T 1bpo_A 294 YMN 296 (494)
T ss_dssp EEE
T ss_pred eee
Confidence 654
No 328
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.16 E-value=0.055 Score=42.14 Aligned_cols=153 Identities=11% Similarity=0.114 Sum_probs=75.5
Q ss_pred ccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecCC-----cEEEEEEc
Q 022184 19 VNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG-----GCKLFEVY 93 (301)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~~w~~~ 93 (301)
..++++|+.... ...-.+|.|++....+...+..... ...-..+.+ +++.++.|+.++ .+.+||+.
T Consensus 62 ~~lyv~GG~~~~---~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~ 132 (302)
T 2xn4_A 62 GLVFAVGGFNGS---LRVRTVDSYDPVKDQWTSVANMRDR----RSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIK 132 (302)
T ss_dssp TEEEEESCBCSS---SBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETT
T ss_pred CEEEEEeCcCCC---ccccceEEECCCCCceeeCCCCCcc----ccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCC
Confidence 356667664321 1223467777777666443221111 111122222 566777777553 46677766
Q ss_pred CCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC-------CeEEEEeCCCcceec--ccccCCccEEEEEecC
Q 022184 94 GGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-------GHLRIMHWPSLRIIL--DEPKAHKSVLDMDFSL 164 (301)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~ 164 (301)
+.+-.. . ..+.....-.+++. -++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+
T Consensus 133 ~~~W~~--~----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 203 (302)
T 2xn4_A 133 SNEWFH--V----APMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-- 203 (302)
T ss_dssp TTEEEE--E----CCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--
T ss_pred CCeEee--c----CCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--
Confidence 554211 1 11111111112222 367777777643 358889987654322 22211112222222
Q ss_pred CCcEEEEEeCC-----CcEEEEeCCCCceE
Q 022184 165 DSEFLATTSTD-----GSARIWKTEDGVAW 189 (301)
Q Consensus 165 ~~~~l~~~~~d-----~~i~i~d~~~~~~~ 189 (301)
++++++.|+.+ ..+.+||+.+.+-.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 57778887764 36889999876543
No 329
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.15 E-value=0.058 Score=42.17 Aligned_cols=198 Identities=10% Similarity=0.106 Sum_probs=108.9
Q ss_pred eEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC--------------CcEEEEEEcCCcccccccc
Q 022184 38 EIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN--------------GGCKLFEVYGGATDINLLA 103 (301)
Q Consensus 38 ~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--------------~~i~~w~~~~~~~~~~~~~ 103 (301)
+||.++.++..... +. .+. +--++++|++|+.+... ..|+..++++.+. ....
T Consensus 38 ~ly~~~~dg~~~~~-------l~--~~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~--~~l~ 104 (302)
T 3s25_A 38 RLYAMNIDGSNIHK-------LS--NDT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS--TVLD 104 (302)
T ss_dssp EEEEEETTSCSCEE-------EE--EEE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC--EEEE
T ss_pred eEEEEcCCCCCCEE-------cc--CCc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc--eEee
Confidence 67877766543211 11 112 23457889988877543 2455555544432 1111
Q ss_pred ccCCCCCCCCCeeEEEEeeCCCEEEEee----cCCeEEEEeCCCcceecccccCCccEEEEEecCCCcEEEEEeC-CCcE
Q 022184 104 KKMPPLQDAGPQKCLSFSVDGSRFAAGG----VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST-DGSA 178 (301)
Q Consensus 104 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i 178 (301)
.. .+..|+++++.|+... .+..|+..++..... ..+..+.. .+++|+++.|+-.+. ...|
T Consensus 105 --------~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~~----~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 105 --------PD--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHYL----FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp --------CS--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESSCC----CCSEEETTEEEEECTTTCCE
T ss_pred --------cC--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCCCc----eEeeEECCEEEEEeCCCceE
Confidence 01 2347889999988776 344566666654332 33333322 456788888876665 5678
Q ss_pred EEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCE
Q 022184 179 RIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKY 258 (301)
Q Consensus 179 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 258 (301)
...++..+.....+. . ... ..+.|++.++++ ........|..-++...... .+. ...+ ..|+|++++
T Consensus 170 y~~~l~g~~~~~l~~---~-~~~-~~~~P~g~~iy~---t~~~~~~~I~~~~ldG~~~~-~Lt--~~~~--~~~~~~g~~ 236 (302)
T 3s25_A 170 YRYDTASQSEALFYD---C-NCY-KPVVLDDTNVYY---MDVNRDNAIVHVNINNPNPV-VLT--EANI--EHYNVYGSL 236 (302)
T ss_dssp EEEETTTTEEEEEEC---S-CEE-EEEEEETTEEEE---EEGGGTTEEEEECSSSCCCE-ECS--CSCE--EEEEEETTE
T ss_pred EEEECCCCCEEEEeC---C-Ccc-ceeeecCCEEEE---EEcCCCcEEEEEECCCCCeE-EEe--CCCc--ceEEECCCE
Confidence 888887665443322 1 222 345699987432 22222257777777765432 222 2223 347888888
Q ss_pred EEEeeC--CCcEEEEeCCCc
Q 022184 259 LAMGSK--DGDICVVDVKKM 276 (301)
Q Consensus 259 l~~~~~--d~~i~i~~~~~~ 276 (301)
|+.+.. .+.|..-++...
T Consensus 237 Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 237 IFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EEEEECSSSCEEEEEETTSC
T ss_pred EEEEECCCCcEEEEEECCCC
Confidence 876532 356666666543
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.14 E-value=0.086 Score=43.87 Aligned_cols=109 Identities=13% Similarity=0.083 Sum_probs=62.2
Q ss_pred ccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeec-------CCCCeeEEEEccC---CCcceEEEEEEe----
Q 022184 155 KSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRN-------SDEKIELCRFSKD---GTKPFLFCTVQR---- 220 (301)
Q Consensus 155 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~~~v~~~~~~~~---~~~~~~~~~~~~---- 220 (301)
...+.++|.|+|+++++-...+.|++++..+++........ .......++|+|+ +..+|+......
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45679999999987776544457888886655543222111 1234678999996 555443221100
Q ss_pred CC----cceEEEEEccCc-------eEee-eee-ccCCCcEEEEEcCCCCEEEEee
Q 022184 221 GD----KALLAVYDISTW-------NKIG-HKR-LLRKPASVLSISLDGKYLAMGS 263 (301)
Q Consensus 221 ~~----~~~i~~~d~~~~-------~~~~-~~~-~~~~~v~~~~~s~~~~~l~~~~ 263 (301)
+. ...|.-|+.... +.+. .+. ...+....++|.|||++.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 01 245666665321 1111 111 1224578899999998776654
No 331
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.13 E-value=0.18 Score=47.27 Aligned_cols=273 Identities=14% Similarity=0.121 Sum_probs=138.5
Q ss_pred CceeEEEeeeecCC---CccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEEC--CCCCeE
Q 022184 4 GGTVTCGSWIKRPE---NVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVN--PSGDDF 78 (301)
Q Consensus 4 ~~~v~~~~w~~~~~---~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l 78 (301)
...|.|+++.+.++ ...++|+|. ..+++++|+.++.-. .+ ....+.. ...+.++.+. ....+|
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~-----~~d~tv~I~sL~~l~-~~-----~~~~L~~-~~~p~si~l~~~~~~~~L 620 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGL-----WTDISARILKLPSFE-LL-----HKEMLGG-EIIPRSILMTTFESSHYL 620 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEE-----TTTTEEEEEETTTCC-EE-----EEEECCS-SCCEEEEEEEEETTEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEE-----CCCCEEEEEECCCCC-eE-----EEEECCC-CCCCcEEEEEEeCCCcEE
Confidence 45799999986543 246788765 247788999986422 11 1112211 1233333332 234578
Q ss_pred EEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecccccCCccEE
Q 022184 79 VCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVL 158 (301)
Q Consensus 79 ~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~ 158 (301)
..+-.||.+.-+.++...... .......+ +..++.-..+...+..-+.+..+.-..++.-+ ++....- -....+.
T Consensus 621 ~igl~dG~l~~~~~d~~tg~l--~d~r~~~L-G~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~-l~~~~v~ 695 (1158)
T 3ei3_A 621 LCALGDGALFYFGLNIETGLL--SDRKKVTL-GTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSN-VNLKEVN 695 (1158)
T ss_dssp EEEETTSEEEEEEECTTTCCE--EEEEEEEC-CSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEE-BSSSCCC
T ss_pred EEEeCCCeEEEEEEcCCCCcc--ccceeEEc-CCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEec-cChHHhc
Confidence 888899988777765322111 10000111 23445444454444433333334444444422 2222111 1112232
Q ss_pred E-EEecCC--CcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEe--C------------
Q 022184 159 D-MDFSLD--SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR--G------------ 221 (301)
Q Consensus 159 ~-~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~------------ 221 (301)
. ..|+.. .+-++..+ ++.++|..+..-.....-..+-...++.++++|..+...+...-.. .
T Consensus 696 ~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 774 (1158)
T 3ei3_A 696 YMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSA 774 (1158)
T ss_dssp EEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCH
T ss_pred eEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhh
Confidence 2 334332 12344433 4568888876543333333334456888888887775333221110 0
Q ss_pred ------------------------------CcceEEEEEccCceEeeeeeccC-CCcEEEE---EcCC-CCEEEEee---
Q 022184 222 ------------------------------DKALLAVYDISTWNKIGHKRLLR-KPASVLS---ISLD-GKYLAMGS--- 263 (301)
Q Consensus 222 ------------------------------~~~~i~~~d~~~~~~~~~~~~~~-~~v~~~~---~s~~-~~~l~~~~--- 263 (301)
..+.|++.|..+++.+..+.... ..+.+++ |..+ ..++++|+
T Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~ 854 (1158)
T 3ei3_A 775 STQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMV 854 (1158)
T ss_dssp HHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEEC
T ss_pred hhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeec
Confidence 12457888888877665554333 2344443 3332 47888886
Q ss_pred -------CCCcEEEEeCCCceeeccccccccCccEEEEE
Q 022184 264 -------KDGDICVVDVKKMEINHWSKRLHLGTSIALVE 295 (301)
Q Consensus 264 -------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~ 295 (301)
..|.|.+|++..+++........ .++|++++
T Consensus 855 ~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v-~g~v~al~ 892 (1158)
T 3ei3_A 855 YPEEAEPKQGRIVVFQYSDGKLQTVAEKEV-KGAVYSMV 892 (1158)
T ss_dssp CTTCSSCCCEEEEEEEEETTEEEEEEEEEE-SSCEEEEE
T ss_pred CCCCCCCCceEEEEEEEECCEEEEEEEEEc-CCcCEEEe
Confidence 34789999997554433332333 67777765
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.12 E-value=0.068 Score=44.49 Aligned_cols=99 Identities=12% Similarity=0.204 Sum_probs=56.3
Q ss_pred CCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcce--ecccc------cCCccEEEEEecCC---CcEE-EEEeC------
Q 022184 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI--ILDEP------KAHKSVLDMDFSLD---SEFL-ATTST------ 174 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~------~~~~~i~~~~~~~~---~~~l-~~~~~------ 174 (301)
.....|+|.|+|+++++-...+.|++++..+++. +..+. .....+..|+|+|+ +..| ++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3467899999998666654445788887654433 11121 12456789999995 4444 44332
Q ss_pred ------CCcEEEEeCCCC--c---eEEE---EeecCCCCeeEEEEccCCCc
Q 022184 175 ------DGSARIWKTEDG--V---AWTF---LTRNSDEKIELCRFSKDGTK 211 (301)
Q Consensus 175 ------d~~i~i~d~~~~--~---~~~~---~~~~~~~~v~~~~~~~~~~~ 211 (301)
...|.-++.... . .... +..........++|.|||..
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~L 157 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKI 157 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCE
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeE
Confidence 134555554322 1 1111 22111224789999999973
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.92 E-value=0.096 Score=40.83 Aligned_cols=186 Identities=13% Similarity=0.072 Sum_probs=92.9
Q ss_pred eEEEEec--CCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecC----CeEEEEeCCCcceec--
Q 022184 77 DFVCSTT--NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----GHLRIMHWPSLRIIL-- 148 (301)
Q Consensus 77 ~l~~~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~v~d~~~~~~~~-- 148 (301)
.++.|+. ...+.+||..+.+-.. ...+.....-.++. ..++.+++.|+.+ ..+.+||..+.+-..
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~------~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTD------IRCPFEKRRDAACV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEE------CCCCSCCCBSCEEE-EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCceEEEecCCCCCEec------CCCCCcccceeEEE-EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC
Confidence 4445554 3568888877654311 11111111111222 2367777888755 678889987764321
Q ss_pred ccccCCccEEEEEecCCCcEEEEEeCC------CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCC
Q 022184 149 DEPKAHKSVLDMDFSLDSEFLATTSTD------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD 222 (301)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 222 (301)
.+.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-..+....-.+++. -+++ ++ +.++.
T Consensus 87 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iy----v~GG~ 158 (306)
T 3ii7_A 87 GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGL-IY----VCGGS 158 (306)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTE-EE----EECCE
T ss_pred CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCE-EE----EECCC
Confidence 22211112222222 67777887765 458899998776433322111111112222 2333 22 22321
Q ss_pred ---------cceEEEEEccCceE--eeeeeccCCCcEEEEEcCCCCEEEEeeCC-----CcEEEEeCCCceee
Q 022184 223 ---------KALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEIN 279 (301)
Q Consensus 223 ---------~~~i~~~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~ 279 (301)
-..+.+||+.+.+- +..+.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred CCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence 35688999877643 2222111122222222 67777777654 46899999876543
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.90 E-value=0.1 Score=40.80 Aligned_cols=189 Identities=13% Similarity=-0.029 Sum_probs=93.4
Q ss_pred CCCeEEEEecC----CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeec----C-----CeEEEEe
Q 022184 74 SGDDFVCSTTN----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV----D-----GHLRIMH 140 (301)
Q Consensus 74 ~~~~l~~~~~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-----g~i~v~d 140 (301)
++..++.|+.+ ..+.+||..+.+-... ..+.....-.+++ ..++++++.|+. + ..+.+||
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~------~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d 96 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL------ADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYN 96 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEEC------CCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeEC------CCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEEC
Confidence 45566666532 3578888766543111 1111111111222 236777777775 2 4688889
Q ss_pred CCCcceec--ccccCCccEEEEEecCCCcEEEEEeCC-----CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcce
Q 022184 141 WPSLRIIL--DEPKAHKSVLDMDFSLDSEFLATTSTD-----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (301)
Q Consensus 141 ~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (301)
+.+.+-.. .+.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-..+....-.+++.. ++. +
T Consensus 97 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i- 171 (308)
T 1zgk_A 97 PMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRL-L- 171 (308)
T ss_dssp TTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE-E-
T ss_pred CCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCE-E-
Confidence 87654321 12111112222222 57777777643 3588899887654332211111111122222 333 2
Q ss_pred EEEEEEeCC-----cceEEEEEccCceEe--eeeeccCCCcEEEEEcCCCCEEEEeeCC-----CcEEEEeCCCceee
Q 022184 214 LFCTVQRGD-----KALLAVYDISTWNKI--GHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEIN 279 (301)
Q Consensus 214 ~~~~~~~~~-----~~~i~~~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~ 279 (301)
.+.++. ...+.+||+.+.+-. ..+.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 172 ---yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 172 ---YAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp ---EEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ---EEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 233332 246889998765432 222211222223333 67778888764 46999999876543
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.82 E-value=0.25 Score=44.06 Aligned_cols=214 Identities=12% Similarity=0.038 Sum_probs=119.9
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~ 142 (301)
...|.+|.-..+|. |-.|+.+| +..||-..... ... ... .....|.++.-..++ .|..|+.+| +..||..
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~---~~~--~~~-~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~ 90 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQ---HFT--YGE-NNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYR 90 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEE---CSC--TTS-TTSSCEEEEEEETTT-EEEEEETTE-EEEEETT
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEE---EEc--cCC-CCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCC
Confidence 56799999888874 55566777 66666322111 000 011 123568887776665 566666665 7889987
Q ss_pred CcceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEe----ecCCCCeeEEEEccCCCcceEEEEE
Q 022184 143 SLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT----RNSDEKIELCRFSKDGTKPFLFCTV 218 (301)
Q Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (301)
+.+...........|.++.. .++. |..++.+ -+..+|..+++.. .+. ......|.++...+++.. .
T Consensus 91 ~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~l------W 160 (758)
T 3ott_A 91 ADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQI------Y 160 (758)
T ss_dssp TTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCE------E
T ss_pred CCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCE------E
Confidence 65432211111235776654 3554 4445554 6788898765543 231 111235778888777773 3
Q ss_pred EeCCcceEEEEEccCceEeeee-ec----cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEE
Q 022184 219 QRGDKALLAVYDISTWNKIGHK-RL----LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL 293 (301)
Q Consensus 219 ~~~~~~~i~~~d~~~~~~~~~~-~~----~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~ 293 (301)
.+..+ -|..+|..+.+..... .. ....|.++...+++..|..|+. +-+..++..+++..... ... ...|.+
T Consensus 161 igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~-~l~-~~~i~~ 236 (758)
T 3ott_A 161 VGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTE-AFH-NNSIKS 236 (758)
T ss_dssp EEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEE-EEE-EEEEEE
T ss_pred EEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEecc-CCC-CCeEEE
Confidence 34444 4778887765532111 11 1224788888877765555554 45888998776543221 112 345667
Q ss_pred EEEccCC
Q 022184 294 VEFCPTQ 300 (301)
Q Consensus 294 ~~~spdg 300 (301)
+.-.++|
T Consensus 237 i~~d~~g 243 (758)
T 3ott_A 237 LALDGNG 243 (758)
T ss_dssp EEECTTC
T ss_pred EEEcCCC
Confidence 6665555
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.0028 Score=50.24 Aligned_cols=116 Identities=11% Similarity=0.035 Sum_probs=66.6
Q ss_pred CeEEEEecCCcEEEEEEcCCcccccccccc-CCCCCCCCCeeEEEEeeCCCEEEEe-ecCCeEEEEeCCCcceeccccc-
Q 022184 76 DDFVCSTTNGGCKLFEVYGGATDINLLAKK-MPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSLRIILDEPK- 152 (301)
Q Consensus 76 ~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~- 152 (301)
..++.++.||.|.-+|.++++....+.... ...+....+. ...++..++.. +.||.|..++..+|.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~----~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPS----RLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSC----TTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCc----cccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 367777888888888887777655543321 0111000000 00123333333 5799999999887754332211
Q ss_pred ---CCccEEE---EEe-c----CCCcEEEEEeCCCcEEEEeCCCCceEEEEeec
Q 022184 153 ---AHKSVLD---MDF-S----LDSEFLATTSTDGSARIWKTEDGVAWTFLTRN 195 (301)
Q Consensus 153 ---~~~~i~~---~~~-~----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 195 (301)
...++.. ... . ..+..+++++.++++...|+++|+.+..+...
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 1112221 001 0 14567889999999999999999999888643
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.72 E-value=0.19 Score=47.48 Aligned_cols=202 Identities=11% Similarity=0.101 Sum_probs=114.8
Q ss_pred EEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc-ce
Q 022184 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL-RI 146 (301)
Q Consensus 68 ~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~-~~ 146 (301)
+.-.+|..+.+|.- ...++++||+++... +....-..+|..-.|-.+ +.|+..+ +..|+.|++... .+
T Consensus 70 sAIMnP~~~iiALr-ag~~lQiFnl~~k~k--------lks~~~~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P 138 (1630)
T 1xi4_A 70 SAIMNPASKVIALK-AGKTLQIFNIEMKSK--------MKAHTMTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQP 138 (1630)
T ss_pred hhccCCCcceEEEe-cCCeEEEeehHHhhh--------hcccccCCCceEEEecCC-CeeEEEc-CCeEEEeccCCCCcc
Confidence 44567877766654 367899999987764 333333456666667544 4555555 567999999643 33
Q ss_pred ecccccCC----ccEEEEEecCCCcEEEEEe-------CCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEE
Q 022184 147 ILDEPKAH----KSVLDMDFSLDSEFLATTS-------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (301)
Q Consensus 147 ~~~~~~~~----~~i~~~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (301)
...+..|. ..|..-..+++.++++..+ ..|.+.+|..+.+.. +.+.+|.. ....+....+.....++
T Consensus 139 ~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegha~-~F~~~~~~~~~~~~~l~ 216 (1630)
T 1xi4_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAA-SFAQFKMEGNAEESTLF 216 (1630)
T ss_pred HHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHhHh-hhheeccCCCCCCceEE
Confidence 33333332 3577777788888877544 346788888764332 22222211 11111111111101122
Q ss_pred EEEEe-CCcceEEEEEccCc---eEe------eeeec---cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccc
Q 022184 216 CTVQR-GDKALLAVYDISTW---NKI------GHKRL---LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (301)
Q Consensus 216 ~~~~~-~~~~~i~~~d~~~~---~~~------~~~~~---~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 282 (301)
+++.. ...+.+++.++... .+. ..+.. ...-..++..|+.-..+..-+.-|.|++||+.++..+..-
T Consensus 217 ~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred EEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhc
Confidence 22222 22368888887543 110 00111 1233456777887778888889999999999998877643
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.68 E-value=0.13 Score=41.19 Aligned_cols=95 Identities=7% Similarity=0.100 Sum_probs=46.2
Q ss_pred CCCeEEEEecC-CcEEEEEEcCCccccccccccCCCCC-CCCCeeEEEEeeCCCEEEEeec-C---------CeEEEEeC
Q 022184 74 SGDDFVCSTTN-GGCKLFEVYGGATDINLLAKKMPPLQ-DAGPQKCLSFSVDGSRFAAGGV-D---------GHLRIMHW 141 (301)
Q Consensus 74 ~~~~l~~~~~d-~~i~~w~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~-d---------g~i~v~d~ 141 (301)
+++.++.|+.+ ..+.+||+.......... ..+. ....-.+++ .-++++++.|+. + ..+.+||+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~----~~~p~~~R~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTAL----AAFPGGPRDQATSA-FIDGNLYVFGGIGKNSEGLTQVFNDVHKYNP 93 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEEC----CCCTTCCCBSCEEE-EETTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeEC----CCCCCCcCccceEE-EECCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence 56666666543 467778875422222211 1111 111111222 236777777775 2 46888998
Q ss_pred CCcceec--ccc-cCCccEEEEEecCCCcEEEEEeCC
Q 022184 142 PSLRIIL--DEP-KAHKSVLDMDFSLDSEFLATTSTD 175 (301)
Q Consensus 142 ~~~~~~~--~~~-~~~~~i~~~~~~~~~~~l~~~~~d 175 (301)
.+.+-.. .+. ........+. .++++++.|+.+
T Consensus 94 ~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 94 KTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 7765322 121 1111222222 467788888754
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.57 E-value=0.36 Score=42.62 Aligned_cols=108 Identities=11% Similarity=0.068 Sum_probs=60.6
Q ss_pred CCCeEEEEecC------CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCC--eEEEEeCCCcc
Q 022184 74 SGDDFVCSTTN------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG--HLRIMHWPSLR 145 (301)
Q Consensus 74 ~~~~l~~~~~d------~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~v~d~~~~~ 145 (301)
+++.++.|+.+ ..+.+||..+..-.. ...+.....-.+++.-.++++++.|+.++ .+.+||..+.+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~------~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSM------IKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEE------CCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEE------CCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence 67777777654 357778876653211 11111111112233323788888887654 68999987765
Q ss_pred eecc-----cccCCccEEEEEecCC-CcEEEEEeC--C-----CcEEEEeCCCCc
Q 022184 146 IILD-----EPKAHKSVLDMDFSLD-SEFLATTST--D-----GSARIWKTEDGV 187 (301)
Q Consensus 146 ~~~~-----~~~~~~~i~~~~~~~~-~~~l~~~~~--d-----~~i~i~d~~~~~ 187 (301)
-... ..........+.+..+ ++.++.|+. + ..+.+||+.+..
T Consensus 525 W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 525 FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 3221 1111112233555655 677777775 2 358899998876
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.55 E-value=0.19 Score=39.31 Aligned_cols=138 Identities=10% Similarity=-0.007 Sum_probs=70.6
Q ss_pred eEeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC--------CcEEEEEEcCCccccccccccCCCC
Q 022184 38 EIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN--------GGCKLFEVYGGATDINLLAKKMPPL 109 (301)
Q Consensus 38 ~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--------~~i~~w~~~~~~~~~~~~~~~~~~~ 109 (301)
.+|.+++....+...+.......+| ..+.+ +++.++.|+.+ ..+.+||..+.+-. . ...+
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~--~----~~~~ 135 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLF----GLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG--E----SDPL 135 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESC----EEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEE--E----CCCC
T ss_pred ceEEecCCCCeEEECCCCCcchhce----eEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEe--E----CCCC
Confidence 3788888877765432221111111 12222 56666666632 45888887765421 1 1111
Q ss_pred CCCCCeeEEEEeeCCCEEEEeec-C-----CeEEEEeCCCcceec--ccccCCccEEEEEecCCCcEEEEEeCCC-----
Q 022184 110 QDAGPQKCLSFSVDGSRFAAGGV-D-----GHLRIMHWPSLRIIL--DEPKAHKSVLDMDFSLDSEFLATTSTDG----- 176 (301)
Q Consensus 110 ~~~~~v~~~~~s~~~~~l~~~~~-d-----g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~----- 176 (301)
.....-.+++ ..++++++.|+. + ..+.+||+.+.+-.. .+.........+.+ ++++++.|+.++
T Consensus 136 p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 212 (315)
T 4asc_A 136 PYVVYGHTVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTS 212 (315)
T ss_dssp SSCCBSCEEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEE
T ss_pred CCcccceeEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccc
Confidence 1111111222 246777788875 2 468899987654321 12111111222222 677888887654
Q ss_pred cEEEEeCCCCceEE
Q 022184 177 SARIWKTEDGVAWT 190 (301)
Q Consensus 177 ~i~i~d~~~~~~~~ 190 (301)
.+.+||+.+.+-..
T Consensus 213 ~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 213 SAEVYSITDNKWAP 226 (315)
T ss_dssp EEEEEETTTTEEEE
T ss_pred eEEEEECCCCeEEE
Confidence 48889988775433
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.43 E-value=0.42 Score=45.31 Aligned_cols=207 Identities=11% Similarity=0.031 Sum_probs=111.7
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEee-------cCCe
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-------VDGH 135 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~ 135 (301)
..+|.-=.|-... .|+..+ +..|+-|++.+...+.+...+.. .+. ...|..-.-+++.++++..+ -.|.
T Consensus 105 ~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~-~L~-~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~ 180 (1630)
T 1xi4_A 105 TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS-SLA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (1630)
T ss_pred CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcch-hcc-cCeeEEeeeCCCCCeEEEEeeccCCCcccce
Confidence 3457777775433 454443 45599999987555444444322 221 35566667788888876433 3488
Q ss_pred EEEEeCCCcceecccccCCccEEEEEec--C-CCcEEEEEeC---CCcEEEEeCCCC---ceEE-----EEeecC---CC
Q 022184 136 LRIMHWPSLRIILDEPKAHKSVLDMDFS--L-DSEFLATTST---DGSARIWKTEDG---VAWT-----FLTRNS---DE 198 (301)
Q Consensus 136 i~v~d~~~~~~~~~~~~~~~~i~~~~~~--~-~~~~l~~~~~---d~~i~i~d~~~~---~~~~-----~~~~~~---~~ 198 (301)
+.+|..+.+.. +.+.+|......+... + ..+.++.+.. .+.++|-++... .+.. .+..+. ..
T Consensus 181 mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~D 259 (1630)
T 1xi4_A 181 MQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 259 (1630)
T ss_pred eeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccC
Confidence 89998765443 3444554433222221 1 1223333322 367888887442 1100 000000 11
Q ss_pred CeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCcee
Q 022184 199 KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278 (301)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~ 278 (301)
-..++..++.... +..-+.-|.|++||+.++.++..-+....+|...+-+....-++.....|.|.--.+.....
T Consensus 260 fpv~~~vs~k~g~-----iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 260 FPVAMQISEKHDV-----VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred cceEEEeccccCE-----EEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchh
Confidence 1234445554443 34445678999999999998766555556665555444433444445667666666655443
Q ss_pred e
Q 022184 279 N 279 (301)
Q Consensus 279 ~ 279 (301)
+
T Consensus 335 v 335 (1630)
T 1xi4_A 335 I 335 (1630)
T ss_pred h
Confidence 3
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.27 E-value=0.16 Score=39.78 Aligned_cols=136 Identities=9% Similarity=-0.029 Sum_probs=67.4
Q ss_pred EeeeCCCcceeeeCCceeccccccCCcceEEEECCCCCeEEEEecC-------CcEEEEEEcCCccccccccccCCCCCC
Q 022184 39 IFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN-------GGCKLFEVYGGATDINLLAKKMPPLQD 111 (301)
Q Consensus 39 i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-------~~i~~w~~~~~~~~~~~~~~~~~~~~~ 111 (301)
+|.+++....+...+..... ...-..+.+ +++.++.|+.+ ..+.+||+.+.+-. ... .+..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~--~~~----~~p~ 147 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSA----RCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS--EVK----NLPI 147 (318)
T ss_dssp EEEEETTTTEEEECSCBSSC----BCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE--EEC----CCSS
T ss_pred EEEEeCCCCcEEECCCCCcc----ccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEe--ECC----CCCC
Confidence 78888877776543221111 111122222 56677777653 24667776654321 111 1111
Q ss_pred CCCeeEEEEeeCCCEEEEeecC------CeEEEEeCCCcceec--ccccCCccEEEEEecCCCcEEEEEeCCC-----cE
Q 022184 112 AGPQKCLSFSVDGSRFAAGGVD------GHLRIMHWPSLRIIL--DEPKAHKSVLDMDFSLDSEFLATTSTDG-----SA 178 (301)
Q Consensus 112 ~~~v~~~~~s~~~~~l~~~~~d------g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i 178 (301)
...-.+++ ..++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++++++.|+.++ .+
T Consensus 148 ~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 224 (318)
T 2woz_A 148 KVYGHNVI-SHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASV 224 (318)
T ss_dssp CEESCEEE-EETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEE
T ss_pred cccccEEE-EECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceE
Confidence 11111222 2467777777642 458899987764321 12111111122222 577777776543 47
Q ss_pred EEEeCCCCceE
Q 022184 179 RIWKTEDGVAW 189 (301)
Q Consensus 179 ~i~d~~~~~~~ 189 (301)
.+||+.+.+-.
T Consensus 225 ~~yd~~~~~W~ 235 (318)
T 2woz_A 225 EAFDLKTNKWE 235 (318)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCeEE
Confidence 78898876543
No 343
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.24 E-value=0.42 Score=39.82 Aligned_cols=111 Identities=13% Similarity=0.101 Sum_probs=60.4
Q ss_pred CcceEEEECCCCC-eEEEEecCCcEEEEEEcCCccccccccccCCCC------CCCCCeeEEEEeeC----CCEEEEeec
Q 022184 64 GDPMTIAVNPSGD-DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPL------QDAGPQKCLSFSVD----GSRFAAGGV 132 (301)
Q Consensus 64 ~~v~~~~~~~~~~-~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~----~~~l~~~~~ 132 (301)
.....|+|.|+|. .|+++.+.|.|++++.........+.. ....+ ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~-~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLD-IHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEE-CTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecC-CcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3467999999996 566667889999886433211111111 01111 12467889999995 443333222
Q ss_pred --C----------CeEEEEeCCCc----------ceecccc--cCCccEEEEEecCCCcEEEEEeCC
Q 022184 133 --D----------GHLRIMHWPSL----------RIILDEP--KAHKSVLDMDFSLDSEFLATTSTD 175 (301)
Q Consensus 133 --d----------g~i~v~d~~~~----------~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d 175 (301)
+ ..|.-|.+..+ +.+..+. ........|+|.|||.++++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 13444554321 1222221 111235789999999877776543
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.08 E-value=0.69 Score=40.83 Aligned_cols=201 Identities=10% Similarity=0.043 Sum_probs=102.2
Q ss_pred CCCCeEEEEecC----CcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeecC------CeEEEEeC
Q 022184 73 PSGDDFVCSTTN----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVD------GHLRIMHW 141 (301)
Q Consensus 73 ~~~~~l~~~~~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d------g~i~v~d~ 141 (301)
.++..++.|+.+ ..+.+||..+..-.................-.+++..+ ++++++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 46888898776432111000000011111122333333 77778888754 35788898
Q ss_pred CCccee--cccccCCccEEEEEecCCCcEEEEEeCCC--cEEEEeCCCCceEEEEe---ecCC-CCeeEEEEccCCCcce
Q 022184 142 PSLRII--LDEPKAHKSVLDMDFSLDSEFLATTSTDG--SARIWKTEDGVAWTFLT---RNSD-EKIELCRFSKDGTKPF 213 (301)
Q Consensus 142 ~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~---~~~~-~~v~~~~~~~~~~~~~ 213 (301)
.+.+-. ..+......- +++.-.+++.++.|+.++ .+.+||+.+.+-...-. .+.. .....+.+..+...++
T Consensus 476 ~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 775432 2222111122 222323788888887654 68999998765433221 1111 1122355555534332
Q ss_pred EEEEEEeCC-------cceEEEEEccCce--------Eeeeee-ccCCCcEEEEEcCCCCEEEEeeC--------CCcEE
Q 022184 214 LFCTVQRGD-------KALLAVYDISTWN--------KIGHKR-LLRKPASVLSISLDGKYLAMGSK--------DGDIC 269 (301)
Q Consensus 214 ~~~~~~~~~-------~~~i~~~d~~~~~--------~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~--------d~~i~ 269 (301)
+.|+. -..+.+||+.+.+ .+.... ...... +++...++++++.|+. ...+.
T Consensus 555 ----v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 555 ----ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp ----EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred ----EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 33333 2468899987765 111111 111122 2233333778888874 34699
Q ss_pred EEeCCCceee
Q 022184 270 VVDVKKMEIN 279 (301)
Q Consensus 270 i~~~~~~~~~ 279 (301)
+||+.+.+..
T Consensus 630 ~yd~~t~~W~ 639 (695)
T 2zwa_A 630 SLDPLSETLT 639 (695)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCeEE
Confidence 9999877644
No 345
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.89 E-value=0.045 Score=43.42 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=69.8
Q ss_pred CEEEEeecCCeEEEEeCCCcceecccccCC-ccEEEEEec--C-CCcEEEEE-eCCCcEEEEeCCCCceEEEEeecCCCC
Q 022184 125 SRFAAGGVDGHLRIMHWPSLRIILDEPKAH-KSVLDMDFS--L-DSEFLATT-STDGSARIWKTEDGVAWTFLTRNSDEK 199 (301)
Q Consensus 125 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~--~-~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~ 199 (301)
.++++++.||.|.-+|..+|+...++.... .++....-. + ++..++.. +.||.+..++..+|.....+....-..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 378889999999999999998877665431 222221100 1 23334343 589999999998886554443221000
Q ss_pred eeEEEE------------ccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeec
Q 022184 200 IELCRF------------SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (301)
Q Consensus 200 v~~~~~------------~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 242 (301)
...+.. +.++. +++++.++++...|+++|+.+..+..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~------Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEK------VYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCEE------EEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCCE------EEEEecCCEEEEEECCCCcEEEEEec
Confidence 011111 12332 67889999999999999998866643
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.88 E-value=0.088 Score=44.45 Aligned_cols=100 Identities=11% Similarity=0.022 Sum_probs=64.7
Q ss_pred cEEEEEecCCCcEEEEEe-CCCcEEEEeCCCC------ce-------EEEEeecCCCCeeEEEEccCCCcceEEEEEEeC
Q 022184 156 SVLDMDFSLDSEFLATTS-TDGSARIWKTEDG------VA-------WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~------~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (301)
....+..+|||++++.++ .+.++.++|.+.- +. ..... -+-.....+|.++|.- ..+--
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~GlGPlHt~Fd~~G~a-----YTtlf 396 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LGLGPLHTTFDGRGNA-----YTTLF 396 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CCSCEEEEEECSSSEE-----EEEET
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CCCcccEEEECCCCce-----Eeeee
Confidence 345788999999888776 5778999998741 11 22222 2334778899999942 24445
Q ss_pred CcceEEEEEccCc----------eEeeeeeccCCCcEEEEE------cCCCCEEEEee
Q 022184 222 DKALLAVYDISTW----------NKIGHKRLLRKPASVLSI------SLDGKYLAMGS 263 (301)
Q Consensus 222 ~~~~i~~~d~~~~----------~~~~~~~~~~~~v~~~~~------s~~~~~l~~~~ 263 (301)
-|.+|.-|++... ..+..+..|-.+ -.+.- .|||++|++..
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence 7889999998753 233444444332 22222 57899999875
No 347
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.47 E-value=1.3 Score=39.46 Aligned_cols=214 Identities=9% Similarity=0.011 Sum_probs=120.3
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~ 142 (301)
...|.++....+| .|..++.+| +..||..+..... ... .....|.++.. .++ .|..++.+ -+..+|..
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~-----~~~--~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~ 129 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ-----PET--DFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQ 129 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC-----CSC--CCCSCEEEEEE-ETT-EEEEEETT-EEEEEETT
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC-----ccc--CCCceEEEEEe-cCC-cEEEEcCC-cceeEeCC
Confidence 4568888877766 566666666 8889876653311 000 11234666654 455 56666655 57888876
Q ss_pred Ccceecc--c--ccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecC-----CCCeeEEEEccCCCcce
Q 022184 143 SLRIILD--E--PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS-----DEKIELCRFSKDGTKPF 213 (301)
Q Consensus 143 ~~~~~~~--~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~ 213 (301)
+++...- . ......|.++...+++.+.+ ++. +-+..++..+++.. .+.... ...|.++...+++..+
T Consensus 130 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~l- 205 (758)
T 3ott_A 130 SRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCV- 205 (758)
T ss_dssp TCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEE-
T ss_pred CCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEE-
Confidence 6543211 0 01234688888888887555 344 34778887766532 222111 1237777777776642
Q ss_pred EEEEEEeCCcceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCceeecccc------cccc
Q 022184 214 LFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK------RLHL 287 (301)
Q Consensus 214 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~------~~~~ 287 (301)
..+. ++-+..+|..+++...........|.++...++|.+.+. +.+ -+.+++..+.+...... ...
T Consensus 206 ----Wigt-~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~- 277 (758)
T 3ott_A 206 ----WIGT-EGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTTPLQHIIHDSRNIQSLT- 277 (758)
T ss_dssp ----EEEE-EEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTSCCEEECCCTTCTTSCS-
T ss_pred ----EEEE-CCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCCcEEEEEcCCCCcCcCC-
Confidence 2233 235888998776543221222345788888888765544 444 48888887654322110 011
Q ss_pred CccEEEEEEccCC
Q 022184 288 GTSIALVEFCPTQ 300 (301)
Q Consensus 288 ~~~v~~~~~spdg 300 (301)
...|.++....+|
T Consensus 278 ~~~i~~i~~D~~g 290 (758)
T 3ott_A 278 NNIIWNIFADQEH 290 (758)
T ss_dssp CSCEEEEEECTTC
T ss_pred cCeEEEEEEcCCC
Confidence 3457777666655
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.17 E-value=1.2 Score=37.09 Aligned_cols=108 Identities=12% Similarity=0.121 Sum_probs=60.8
Q ss_pred ccEEEEEecCCCc-EEEEEeCCCcEEEEeCCCCc---eEEEEe----e----cCCCCeeEEEEccC---CCcceEEEEEE
Q 022184 155 KSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGV---AWTFLT----R----NSDEKIELCRFSKD---GTKPFLFCTVQ 219 (301)
Q Consensus 155 ~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~---~~~~~~----~----~~~~~v~~~~~~~~---~~~~~~~~~~~ 219 (301)
...+.|+|.||+. .|+.+...|.|++++..... .+..+. . ........++|+|+ ..++|+ ..+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv--~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV--SYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE--EEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEE--EEe
Confidence 3567899999996 45566788999999754321 122211 0 01234788999997 333333 222
Q ss_pred eCCc----------ceEEEEEccC----------ceEeeeee--ccCCCcEEEEEcCCCCEEEEeeC
Q 022184 220 RGDK----------ALLAVYDIST----------WNKIGHKR--LLRKPASVLSISLDGKYLAMGSK 264 (301)
Q Consensus 220 ~~~~----------~~i~~~d~~~----------~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~ 264 (301)
...+ ..|.-|.+.. .+.+..+. ...+....|.|.|||.+.++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 2211 2454455532 12222222 22345688999999987666554
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.10 E-value=0.61 Score=39.53 Aligned_cols=123 Identities=10% Similarity=0.070 Sum_probs=73.9
Q ss_pred CcceEEEECCCCCeEEEEec-CCcEEEEEEcCCcccc-----ccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEE
Q 022184 64 GDPMTIAVNPSGDDFVCSTT-NGGCKLFEVYGGATDI-----NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~-d~~i~~w~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 137 (301)
.....+..+|||++++.++. +.++.+++++.-.... .............-.....+|.++|....+---|..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 45678899999999987764 6899999997532100 00000001111234568899999995445555799999
Q ss_pred EEeCCCc----------ceecccccCCccEEEEEe------cCCCcEEEEEe---CCCc----------EEEEeCCCCc
Q 022184 138 IMHWPSL----------RIILDEPKAHKSVLDMDF------SLDSEFLATTS---TDGS----------ARIWKTEDGV 187 (301)
Q Consensus 138 v~d~~~~----------~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~---~d~~----------i~i~d~~~~~ 187 (301)
-|++... ..+.++..|..+ -.+.- .|||++|++.. .|+. -.+.|+...+
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGdk 480 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGDE 480 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSSS
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCCc
Confidence 9998643 222233333222 22222 57899999875 4443 3677775433
No 350
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.95 E-value=6.2 Score=37.17 Aligned_cols=113 Identities=12% Similarity=-0.017 Sum_probs=69.2
Q ss_pred CCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceec-ccccCCccEEEEEecCC------CcEEEEEeC-CCcEEEEeCC
Q 022184 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL-DEPKAHKSVLDMDFSLD------SEFLATTST-DGSARIWKTE 184 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~------~~~l~~~~~-d~~i~i~d~~ 184 (301)
..|...+.+ +..++.++ ++.+.++.+..++... ....-...|.|+++.|. +++++.|.. |++++|+++.
T Consensus 514 ~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 514 KNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 345555543 34666665 6788888776543211 11122457999999863 368888886 9999999999
Q ss_pred CCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEc
Q 022184 185 DGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI 231 (301)
Q Consensus 185 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 231 (301)
+.+.+..........+.++.+..-+..++ +..+-.||.+.-+.+
T Consensus 591 ~l~~~~~~~L~~~~~p~si~l~~~~~~~~---L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 591 SFELLHKEMLGGEIIPRSILMTTFESSHY---LLCALGDGALFYFGL 634 (1158)
T ss_dssp TCCEEEEEECCSSCCEEEEEEEEETTEEE---EEEEETTSEEEEEEE
T ss_pred CCCeEEEEECCCCCCCcEEEEEEeCCCcE---EEEEeCCCeEEEEEE
Confidence 87766554433223455555443333333 456667887765554
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.42 E-value=3.9 Score=31.41 Aligned_cols=187 Identities=10% Similarity=-0.012 Sum_probs=93.5
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCC
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 143 (301)
..|..++...+. .++. . ||.|+.|-......... .......|..++...+ ..+.-. +|.|+.|-...
T Consensus 63 ~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~-------P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~ 129 (282)
T 3qhy_B 63 SGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTV-------PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDS 129 (282)
T ss_dssp SCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCC-------CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCT
T ss_pred CCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCC-------CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCC
Confidence 357777775433 2333 4 89999998654332111 0011245666665433 334445 89999997654
Q ss_pred cceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCc
Q 022184 144 LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (301)
Q Consensus 144 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 223 (301)
...+-........|..++...+...+ -. ||.+..|-......+. ........|..++...... ++. .+
T Consensus 130 ~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~hs------~al--~~ 197 (282)
T 3qhy_B 130 DGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFGQTT-VPAEAQSGVDDVAGGIFHS------LAL--KD 197 (282)
T ss_dssp TSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSEE------EEE--ET
T ss_pred CCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCCCCC-CceecCCCeEEEEecCCEE------EEE--EC
Confidence 22211111122457777655333222 33 7888888754322111 1111122355555443322 222 48
Q ss_pred ceEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCCcee
Q 022184 224 ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278 (301)
Q Consensus 224 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~ 278 (301)
+.|..|=......+.........|..++...+. .++ -. ||.|+.|=.....+
T Consensus 198 G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~a-l~-~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 198 GKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLA-LK-NGKVIAWGSSRTAP 249 (282)
T ss_dssp TEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEE-EE-TTEEEEESTTCCCC
T ss_pred CeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEE-EE-CCEEEEecCCCCcc
Confidence 889999755432221111112346666654432 233 33 88999997665433
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.31 E-value=8.8 Score=35.32 Aligned_cols=38 Identities=13% Similarity=0.131 Sum_probs=33.4
Q ss_pred cEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEe
Q 022184 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT 193 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 193 (301)
.+.+++..++..++++.+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777888888899999999999999999999988764
No 353
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=87.50 E-value=10 Score=30.63 Aligned_cols=161 Identities=6% Similarity=-0.048 Sum_probs=84.5
Q ss_pred eEEEEeCCCc--ceeccccc------CCccEEEEEec---CC----CcEEEEEe-CCCcEEEEeCCCCceEEEEee---c
Q 022184 135 HLRIMHWPSL--RIILDEPK------AHKSVLDMDFS---LD----SEFLATTS-TDGSARIWKTEDGVAWTFLTR---N 195 (301)
Q Consensus 135 ~i~v~d~~~~--~~~~~~~~------~~~~i~~~~~~---~~----~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~---~ 195 (301)
.|.+||+.+. +.++++.- ....+..+.+. |+ +.++..+. ....|.++|+.+++..+.+.. .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4667777777 65544321 23467788877 32 33433333 467899999999887665521 0
Q ss_pred C--------------CCCeeEEEEccC----CCcceEEEEEEeCCcceEEEEE---ccCce---EeeeeeccC---CCcE
Q 022184 196 S--------------DEKIELCRFSKD----GTKPFLFCTVQRGDKALLAVYD---ISTWN---KIGHKRLLR---KPAS 248 (301)
Q Consensus 196 ~--------------~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~d---~~~~~---~~~~~~~~~---~~v~ 248 (301)
. ...+..++++|+ ++.+|+ ...++ ..+.--. ++... .+..+ +.+ ..-.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf--~plss--~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~ 278 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYY--LAGSA--IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAI 278 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEE--EESSC--SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEE--EECCC--CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcc
Confidence 0 124777888887 555332 12221 1222222 11111 11111 112 2233
Q ss_pred EEEEc-CCCCEEEEeeCCCcEEEEeCCC-c---eeeccccccccCccEEEEEEccCC
Q 022184 249 VLSIS-LDGKYLAMGSKDGDICVVDVKK-M---EINHWSKRLHLGTSIALVEFCPTQ 300 (301)
Q Consensus 249 ~~~~s-~~~~~l~~~~~d~~i~i~~~~~-~---~~~~~~~~~~~~~~v~~~~~spdg 300 (301)
.++++ .+|.++++--..+.|..|+..+ . +....+.....-..+..+.+.++|
T Consensus 279 ~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g 335 (381)
T 3q6k_A 279 ALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKG 335 (381)
T ss_dssp EEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTS
T ss_pred eEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCC
Confidence 56675 6787777777788999999876 1 111111111113456777776665
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=86.95 E-value=8.8 Score=29.41 Aligned_cols=183 Identities=10% Similarity=-0.028 Sum_probs=91.0
Q ss_pred cceEEEECCCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCc
Q 022184 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL 144 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~ 144 (301)
.|..++.... +.+.-. ||.++.|-......... .......|..++...+. .++. . ||.|+.|-....
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~-------p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~ 91 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTM-------PAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNED 91 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSC-------CGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTT
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCC-------CccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCC
Confidence 5777777533 223234 89999998654432111 00112356666654332 2333 4 899999976532
Q ss_pred ceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcc
Q 022184 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (301)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 224 (301)
..+-.-......|..++...+ +.+... ||.|..|-......+- ........|..++...... ++. . ++
T Consensus 92 Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~~------~~l-~-~G 159 (282)
T 3qhy_B 92 GQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYTA------LAV-K-NG 159 (282)
T ss_dssp STTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSEE------EEE-E-TT
T ss_pred CCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCEE------EEE-E-CC
Confidence 211111111246777776544 333334 8999999765322111 0111122355554433321 122 2 68
Q ss_pred eEEEEEccCceEeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 225 LLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 225 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
.|..|-......+.........|..++...+- .++. .||.|+.|=...
T Consensus 160 ~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 160 GVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp EEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCT
T ss_pred EEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCC
Confidence 88888765432222111123456666654332 2333 588999997654
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=86.48 E-value=1.9 Score=37.08 Aligned_cols=55 Identities=18% Similarity=0.315 Sum_probs=39.9
Q ss_pred CcEEEEEcCCCCEEEEeeCC------------CcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 246 PASVLSISLDGKYLAMGSKD------------GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 246 ~v~~~~~s~~~~~l~~~~~d------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
..-.|+|+|.|++++.-..+ +.+.+.+..++++.+.+. .+....++.++|+|||+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fspDg~ 543 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQK 543 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSS
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CCCCccCcCeeECCCCC
Confidence 34679999999976665432 346677777787766553 34378899999999986
No 356
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=86.34 E-value=17 Score=32.17 Aligned_cols=180 Identities=8% Similarity=0.008 Sum_probs=92.9
Q ss_pred eEEE-EeeCCCEEEEee-----cCCeEEEEeCCCcceecccccC--Cc------cEEEEEecCCCcEEEEEe--------
Q 022184 116 KCLS-FSVDGSRFAAGG-----VDGHLRIMHWPSLRIILDEPKA--HK------SVLDMDFSLDSEFLATTS-------- 173 (301)
Q Consensus 116 ~~~~-~s~~~~~l~~~~-----~dg~i~v~d~~~~~~~~~~~~~--~~------~i~~~~~~~~~~~l~~~~-------- 173 (301)
..+. ++|++++++.+- +-..++++|+.+++.+..-... +. ....++|..+...+++..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 4455 889998877642 2347999999998876432111 11 113447774444444321
Q ss_pred --CCCcEEEEeCCCC--ceEEEEeecCCCCeeEEEEccCCCcc--eEEEEEE-eCCcceEEEEEccC--ceEeeeeeccC
Q 022184 174 --TDGSARIWKTEDG--VAWTFLTRNSDEKIELCRFSKDGTKP--FLFCTVQ-RGDKALLAVYDIST--WNKIGHKRLLR 244 (301)
Q Consensus 174 --~d~~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~-~~~~~~i~~~d~~~--~~~~~~~~~~~ 244 (301)
....|+.|.+-+. +-...+.............++++++. ++++... ......+.+.|... ++.. .+....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-EeecCC
Confidence 1245888887654 23334443333323345667787753 1221122 23346677777653 3322 222222
Q ss_pred CCcEEEEEcCCCCEEEEee----------CCCcEEEEeCCCcee-------ec-cccccccCccEEEEEEccC
Q 022184 245 KPASVLSISLDGKYLAMGS----------KDGDICVVDVKKMEI-------NH-WSKRLHLGTSIALVEFCPT 299 (301)
Q Consensus 245 ~~v~~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~-------~~-~~~~~~~~~~v~~~~~spd 299 (301)
. ..+..++++.+++... ..+.|...++.++.. .+ .+.... ...+..+.|..+
T Consensus 291 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~ 360 (711)
T 4hvt_A 291 D--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTA-NEVFNFISTTKD 360 (711)
T ss_dssp T--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCT-TEEEEEEEECSS
T ss_pred c--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCC-CCeEEEEEEECC
Confidence 2 2233455666655331 357799999876421 11 121222 456777777764
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=86.31 E-value=3.8 Score=35.28 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=43.4
Q ss_pred cEEEEEecCCCcEEEEEeCC------------CcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcce
Q 022184 156 SVLDMDFSLDSEFLATTSTD------------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (301)
..-.|+|+|.|++++.-..+ ..+.+.+..+++....+..+....++.++|+||++.+|
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 35678999999866654432 24666677778877777777777899999999999744
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.31 E-value=12 Score=29.44 Aligned_cols=120 Identities=14% Similarity=0.109 Sum_probs=73.7
Q ss_pred CCcceEEE-ECC--CCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEE
Q 022184 63 EGDPMTIA-VNP--SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (301)
Q Consensus 63 ~~~v~~~~-~~~--~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~ 139 (301)
...|.++. ..+ +..+++..+.+|.++-..+.......+ .......+.....+..+........|+..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-GGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-SCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-CceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 34455554 332 577899999999999888765433211 01111122234556666655566678888889998887
Q ss_pred eCC--Ccc---------eecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCC
Q 022184 140 HWP--SLR---------IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE 184 (301)
Q Consensus 140 d~~--~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 184 (301)
... .-. ....+ .....|.++...+++..++..+..|.++.-.+.
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRF-NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCC-CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred ECcccccCcCCcCCCCeeeecC-CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 765 211 11122 223457776666666788888999998887764
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.82 E-value=7.8 Score=33.14 Aligned_cols=60 Identities=15% Similarity=0.145 Sum_probs=41.9
Q ss_pred ccEEEEEecCCCcEEEEEeC------------CCcEEEEeCCCCceEEEEeecCCCCeeEEEEccCCCcceE
Q 022184 155 KSVLDMDFSLDSEFLATTST------------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214 (301)
Q Consensus 155 ~~i~~~~~~~~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 214 (301)
.....|.|.++|.+.+.... ...+..++..+++....+..+....++.++|+||++.+|+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 35678999999987663321 1256777777787666565444456899999999997543
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=83.65 E-value=14 Score=28.83 Aligned_cols=197 Identities=13% Similarity=0.051 Sum_probs=108.3
Q ss_pred CCCCeEEEEecCCcEEEEEEcCCcccccc-ccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeCC---C-----
Q 022184 73 PSGDDFVCSTTNGGCKLFEVYGGATDINL-LAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP---S----- 143 (301)
Q Consensus 73 ~~~~~l~~~~~d~~i~~w~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~---~----- 143 (301)
++.+++++.+.+|.|+-..+........- .......+.....+..+........++..+..|.++-+... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45667888899999998776544321110 00001112334556666666666778888889987766542 1
Q ss_pred -ccee---cccccCCccEEEEEecC---CCcEEEEEeCCCcEEEEeCCCCce-----EEEEeecCCCCeeEEEEccCCCc
Q 022184 144 -LRII---LDEPKAHKSVLDMDFSL---DSEFLATTSTDGSARIWKTEDGVA-----WTFLTRNSDEKIELCRFSKDGTK 211 (301)
Q Consensus 144 -~~~~---~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~ 211 (301)
|..+ ..+. ....|..+...+ +..+++..+..|.++...+..-.. +..+....+..+-.+........
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCE
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCE
Confidence 1111 1121 223455554332 456788889999999888743211 11122222334555544433443
Q ss_pred ceEEEEEEeCCcceEEEEEccCceE-------eeeeec-cCCCcEEEEEcCCCCEEEEeeCCCcEEEEeCCC
Q 022184 212 PFLFCTVQRGDKALLAVYDISTWNK-------IGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~d~~~~~~-------~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~ 275 (301)
++..+.+|.+..++...-.. +..+.. ....+..+..-.++..+++.+..|..+..++..
T Consensus 165 -----i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 165 -----VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp -----EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred -----EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 45566788888887654211 111111 134555655545566788888899988888754
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=81.52 E-value=5.3 Score=34.12 Aligned_cols=56 Identities=16% Similarity=0.283 Sum_probs=39.1
Q ss_pred CCcEEEEEcCCCCEEEEeeC------------CCcEEEEeCCCceeeccccccccCccEEEEEEccCCC
Q 022184 245 KPASVLSISLDGKYLAMGSK------------DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (301)
Q Consensus 245 ~~v~~~~~s~~~~~l~~~~~------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 301 (301)
.....|.|+++|.+.++... .+.|..++..++++...+.... ...++.++|+||++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-~aEpnGiafSPD~k 543 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-GCEVTGISFSPDQK 543 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-TCEEEEEEECTTSS
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-CccccCCEECCCCC
Confidence 34678999999987774321 2257777887887666552222 46799999999985
No 362
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=81.10 E-value=20 Score=28.87 Aligned_cols=145 Identities=8% Similarity=-0.031 Sum_probs=74.1
Q ss_pred CCCEEEEeecCCeEEEEeCCCcce-----------eccccc-CCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCc---
Q 022184 123 DGSRFAAGGVDGHLRIMHWPSLRI-----------ILDEPK-AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGV--- 187 (301)
Q Consensus 123 ~~~~l~~~~~dg~i~v~d~~~~~~-----------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--- 187 (301)
.....+.-..||.|+.|-....-. ...+.. ....+..++.+.-..+.+....||.|..|-.....
T Consensus 61 G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 61 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence 344556667789999986432110 011111 11244556666666677777889999999643210
Q ss_pred --------eEEEEeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce-----------Eeeeeec-cCCCc
Q 022184 188 --------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN-----------KIGHKRL-LRKPA 247 (301)
Q Consensus 188 --------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-----------~~~~~~~-~~~~v 247 (301)
....+.......|..++... .+ .+.-..+|.|..|-....- ....+.. ....+
T Consensus 141 ~g~~~~~~~p~~v~~l~~~~i~~va~G~--~h-----s~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v 213 (389)
T 3kci_A 141 HGNRSPCDRPRVIESLRGIEVVDVAAGG--AH-----SACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRV 213 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEECS--SE-----EEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCE
T ss_pred CCCCccCcCCeEecccCCCeEEEEEeCc--Ce-----EEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeE
Confidence 11111111122344444432 22 2334567889888643210 0111111 22346
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEEeCC
Q 022184 248 SVLSISLDGKYLAMGSKDGDICVVDVK 274 (301)
Q Consensus 248 ~~~~~s~~~~~l~~~~~d~~i~i~~~~ 274 (301)
..++......+.++-..||.|+.|-..
T Consensus 214 ~~ia~G~g~~~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 214 VDIACGSGDAQTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp EEEEECCSSCEEEEEETTTEEEEEECC
T ss_pred EEEEEcCCCcEEEEEccCCEEEEEeCC
Confidence 666654433566666788889988653
No 363
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=79.06 E-value=36 Score=30.58 Aligned_cols=161 Identities=11% Similarity=0.071 Sum_probs=73.7
Q ss_pred CceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccccCCcceEEEECCCC-CeEEEEe
Q 022184 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSG-DDFVCST 82 (301)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~ 82 (301)
++.|.+++++|.. ...+.+++..+ -+|..+..+..+.........-.-....|.+++++|.. ..++.+.
T Consensus 14 ~g~i~~i~~~p~~--~~~~~a~~~~g--------gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKT--KDLLYARTDIG--------GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSS--TTCEEEEESSS--------CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCC--CCEEEEEecCC--------CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 5789999999653 23333333211 25555555555533111000000013469999999843 3444443
Q ss_pred cCCc----EEEEEEcCCccccccccccCCC---CCCCCCeeEEEEee-CCCEEEEeecCCeEEEEeCCCcc---eecccc
Q 022184 83 TNGG----CKLFEVYGGATDINLLAKKMPP---LQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLR---IILDEP 151 (301)
Q Consensus 83 ~d~~----i~~w~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~---~~~~~~ 151 (301)
.+.. -.||.-..+............. ......+..++++| +.+.++.+...+.|.. ..+.++ .+....
T Consensus 84 g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~ 162 (789)
T 1sqj_A 84 GRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIP 162 (789)
T ss_dssp CSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSC
T ss_pred CccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCc
Confidence 3211 4455554433322222111110 11112355678887 3455666654443322 112222 222111
Q ss_pred ---cCCccEEEEEecCC-CcEEEEEeCC
Q 022184 152 ---KAHKSVLDMDFSLD-SEFLATTSTD 175 (301)
Q Consensus 152 ---~~~~~i~~~~~~~~-~~~l~~~~~d 175 (301)
.....+..+.++|. +..++.+..+
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 11245788999884 4455555544
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.69 E-value=20 Score=31.65 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=29.5
Q ss_pred EEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEee
Q 022184 157 VLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR 194 (301)
Q Consensus 157 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 194 (301)
|.++.+ +..++++.+.|.++|+|++++++++.....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444443 477999999999999999999998887764
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=78.64 E-value=20 Score=27.37 Aligned_cols=197 Identities=10% Similarity=0.063 Sum_probs=107.9
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEE---cCCccccccccccCCCCCCCCCeeEEEEee--CCCEEEEeecCCeEE
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEV---YGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVDGHLR 137 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~ 137 (301)
.+.+..+.-....++|+.-+..|.++--.+ ...... .+ +.....|..+.. + +...++..+.+|.++
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~------~l--l~~~e~i~~v~~-~~~~~~~~v~~T~~G~iK 93 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKV------SL--KSREEKIVGAFI-REKFGNRLLLATKKGYVK 93 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEEC------CC--SSTTCCEEEEEE-GGGSCSEEEEEETTSEEE
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCccc------cc--CCCCCEEEEEEC-CcCCCCEEEEEeCCCEEE
Confidence 445555555555566776677886554332 221110 12 334556666644 4 467899999999999
Q ss_pred EEeCCCcc------eecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCC-------CceEEEEeecCCCCeeEEE
Q 022184 138 IMHWPSLR------IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTED-------GVAWTFLTRNSDEKIELCR 204 (301)
Q Consensus 138 v~d~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-------~~~~~~~~~~~~~~v~~~~ 204 (301)
-..+.... ....+. ..+.+..+........++..+..|.+..+.... ..-...+....+..+..+.
T Consensus 94 r~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~ 172 (276)
T 3no0_A 94 KIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLR 172 (276)
T ss_dssp EEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEE
T ss_pred EEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEE
Confidence 98875432 112222 234566665555566788888889887776532 1111112222233455554
Q ss_pred EccCCCcceEEEEEEeCCcceEEEEEccCceE-------eeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEE--EeCCC
Q 022184 205 FSKDGTKPFLFCTVQRGDKALLAVYDISTWNK-------IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICV--VDVKK 275 (301)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i--~~~~~ 275 (301)
..+++.. ++..+..|.++...+..... +..+ ...+.+..+....+...++..+.+|.+.. ++...
T Consensus 173 ~~~~~~~-----ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 173 IWNGEPY-----LLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EESSCSE-----EEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EeCCCCE-----EEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 4444444 45556677777777643221 1112 22344444433334456777778888887 87654
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.65 E-value=52 Score=31.09 Aligned_cols=38 Identities=13% Similarity=0.131 Sum_probs=31.8
Q ss_pred cEEEEEecCCCcEEEEEeCCCcEEEEeCCCCceEEEEe
Q 022184 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT 193 (301)
Q Consensus 156 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 193 (301)
.+.+++..++..++++.+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455666788899999999999999999999988765
No 367
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.83 E-value=10 Score=35.68 Aligned_cols=36 Identities=8% Similarity=0.080 Sum_probs=29.4
Q ss_pred CeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecc
Q 022184 114 PQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD 149 (301)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 149 (301)
.+.+++..++..++++-+.|+++|+|++.+++++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 445566667888999999999999999999887654
No 368
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=73.63 E-value=28 Score=26.56 Aligned_cols=120 Identities=12% Similarity=0.049 Sum_probs=65.6
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCcccccc-ccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINL-LAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW 141 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~ 141 (301)
.+.+..+......+.++..+..|.+..+....-....+. .......+.....|..+...+++..++..+..|.++...+
T Consensus 115 gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~ 194 (276)
T 3no0_A 115 GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISH 194 (276)
T ss_dssp TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEG
T ss_pred CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEH
Confidence 455666666666668888889998888876432211110 1111122334466766665566778889999999988876
Q ss_pred CCcce-------ecccccCCccEEEEEecCCCcEEEEEeCCCcEEE--EeC
Q 022184 142 PSLRI-------ILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARI--WKT 183 (301)
Q Consensus 142 ~~~~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i--~d~ 183 (301)
..-.. +..+ ...+.+..+....+...++..+.+|.+.. ++.
T Consensus 195 ~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 195 EEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp GGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEG
T ss_pred HHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCH
Confidence 43221 1122 12233443333223334555555666555 554
No 369
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=71.51 E-value=48 Score=28.37 Aligned_cols=97 Identities=12% Similarity=0.102 Sum_probs=53.3
Q ss_pred cEEEEeCCCCceEEEEeecCC------------CCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeeccC
Q 022184 177 SARIWKTEDGVAWTFLTRNSD------------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR 244 (301)
Q Consensus 177 ~i~i~d~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 244 (301)
.+..||.+.++.......... ..+....+.-||+..+++-...-..||++ +|... ..|.
T Consensus 293 ~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~~iD~dG~~-L~st~--------~gHG 363 (591)
T 2zux_A 293 MLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSMAVDHDGKG-MYSTG--------LGHG 363 (591)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTEEECTTSCE-EEECS--------CCCC
T ss_pred EEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeeeEECCCCCE-eeeCC--------CCCC
Confidence 488899888776554432221 12444555666665433222222334433 34432 2566
Q ss_pred CCcEEEEEcCC--CCEEEEeeCCC----cEEEEeCCCceeeccc
Q 022184 245 KPASVLSISLD--GKYLAMGSKDG----DICVVDVKKMEINHWS 282 (301)
Q Consensus 245 ~~v~~~~~s~~--~~~l~~~~~d~----~i~i~~~~~~~~~~~~ 282 (301)
..+....|.|+ |..++.+.+++ -..+.|..+++.+...
T Consensus 364 Da~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 364 DALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGV 407 (591)
T ss_dssp SCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred CeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEc
Confidence 66666777876 44566655441 3556888888877654
No 370
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=67.06 E-value=44 Score=26.23 Aligned_cols=205 Identities=12% Similarity=0.052 Sum_probs=109.0
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCcc-----ccccccccCCCCCCCCCeeEEEEee---CCCEEEEeecCCe
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGAT-----DINLLAKKMPPLQDAGPQKCLSFSV---DGSRFAAGGVDGH 135 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~ 135 (301)
+.+..+......+.|+.-+..|.++-.....-.. ........+ .+.....|..+..-+ +..+++..+.+|.
T Consensus 42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l-~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLL-AFQPEERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHT-TCCTTCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHcc-CCCCCCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 4455554445556666667778665554321110 001100111 223345555554333 4678999999999
Q ss_pred EEEEeCCCcce-------ecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCC--C----C---ceEEEEeecCCCC
Q 022184 136 LRIMHWPSLRI-------ILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE--D----G---VAWTFLTRNSDEK 199 (301)
Q Consensus 136 i~v~d~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~--~----~---~~~~~~~~~~~~~ 199 (301)
++-..+..... ...+.. .+.+..+........++..+..|.+..+... . + .-...+....+..
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~ 199 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDR 199 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCC
T ss_pred EEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCE
Confidence 99887654322 122322 3456555555555677778888988777665 2 1 1111122223344
Q ss_pred eeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceE-------eeeee--ccCCCcEEEEEcCCCCEEEEeeCCCcEEE
Q 022184 200 IELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK-------IGHKR--LLRKPASVLSISLDGKYLAMGSKDGDICV 270 (301)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~i 270 (301)
|..+...+.+.. ++..+..|.++.-.+..... +..+. .....+-.+....+...++..+.+|.+.-
T Consensus 200 Vv~~~~~~~~~~-----ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir 274 (327)
T 3uc1_A 200 LLSLNVVREGTY-----LLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIR 274 (327)
T ss_dssp EEEEEECCTTCE-----EEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEE
T ss_pred EEEEEEECCCCE-----EEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEE
Confidence 666655555554 45566788888777643221 11111 11234444444444556777777888877
Q ss_pred EeCCC
Q 022184 271 VDVKK 275 (301)
Q Consensus 271 ~~~~~ 275 (301)
++...
T Consensus 275 ~~~~~ 279 (327)
T 3uc1_A 275 TAARQ 279 (327)
T ss_dssp EEGGG
T ss_pred Eehhh
Confidence 77643
No 371
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=67.02 E-value=44 Score=26.18 Aligned_cols=205 Identities=10% Similarity=0.041 Sum_probs=104.7
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccc-----cccccccCCCCCCCCCeeEEEEee---CCCEEEEeecCCe
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD-----INLLAKKMPPLQDAGPQKCLSFSV---DGSRFAAGGVDGH 135 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~ 135 (301)
+.+..+......+.|+..+..|.++-+....-... ..... ..-.+.....|..+..-+ ++.+++.++.+|.
T Consensus 39 D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~-~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 117 (323)
T 1wp5_A 39 DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIA-NIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM 117 (323)
T ss_dssp CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGG-GTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChh-hccCCCCCCEEEEEEEecccCCCceEEEEeCCCe
Confidence 44545544445667777778887666554321110 01011 111233344565543323 2567899999999
Q ss_pred EEEEeCCCc--------ceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCC-------CceEEEEeecCCCCe
Q 022184 136 LRIMHWPSL--------RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTED-------GVAWTFLTRNSDEKI 200 (301)
Q Consensus 136 i~v~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-------~~~~~~~~~~~~~~v 200 (301)
++-..+... .....+... +.+..+........++..+.+|.+..+.... ..-+..+....+..+
T Consensus 118 iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~V 196 (323)
T 1wp5_A 118 VKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYI 196 (323)
T ss_dssp EEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCE
T ss_pred EEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEE
Confidence 998877422 222223222 4555555555555677788889888887642 111222222233345
Q ss_pred eEEEEccCCC-cceEEEEEEeCCcceEEEEEccCceE-------eeee---eccCCCcEEEEEcCCCCEEEEeeCCCcEE
Q 022184 201 ELCRFSKDGT-KPFLFCTVQRGDKALLAVYDISTWNK-------IGHK---RLLRKPASVLSISLDGKYLAMGSKDGDIC 269 (301)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~d~~~~~~-------~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 269 (301)
..+...+++. . ++..+..|..+..++..... +..+ +.....+..+....++..++..+.+|.+.
T Consensus 197 v~~~~~~~~~~~-----ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~i 271 (323)
T 1wp5_A 197 VSGQLITSKDES-----IVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIE 271 (323)
T ss_dssp EEEEEECCTTCE-----EEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEE
T ss_pred EEEEEEcCCCcE-----EEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEE
Confidence 5554433333 3 34445666777666643211 1111 11122444333333344566777778777
Q ss_pred EEeCCC
Q 022184 270 VVDVKK 275 (301)
Q Consensus 270 i~~~~~ 275 (301)
.+.+..
T Consensus 272 r~~~~~ 277 (323)
T 1wp5_A 272 TIKVGD 277 (323)
T ss_dssp EEEGGG
T ss_pred EEEhhh
Confidence 777654
No 372
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=66.01 E-value=45 Score=25.94 Aligned_cols=163 Identities=12% Similarity=0.096 Sum_probs=89.9
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccc-----cccccccCCCCCCCCCeeEEEEee---CCCEEEEeecCCe
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD-----INLLAKKMPPLQDAGPQKCLSFSV---DGSRFAAGGVDGH 135 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~ 135 (301)
+.+..+......+.++..+..|.++-+....-... ...... .-.+.....|..+..-+ +..+++..+..|.
T Consensus 47 D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~-~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~ 125 (312)
T 1suu_A 47 DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISE-LINLGDQEEILTIKNSKDLTDDAYLLLTTASGK 125 (312)
T ss_dssp CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGG-TSCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhh-ccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCe
Confidence 44545544445667777788887776665421110 000001 11233344555554332 4667888899999
Q ss_pred EEEEeCCCc-------ceecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCC-------CceEEEEeecCCCCee
Q 022184 136 LRIMHWPSL-------RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTED-------GVAWTFLTRNSDEKIE 201 (301)
Q Consensus 136 i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-------~~~~~~~~~~~~~~v~ 201 (301)
++...+... .....+.. .+.+..+....+...++..+.+|....+.... ..-+..+....+..+.
T Consensus 126 ~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv 204 (312)
T 1suu_A 126 IARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFV 204 (312)
T ss_dssp EEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEE
T ss_pred EEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEE
Confidence 998877432 22223333 34566665555556788888899988887643 1112222222334455
Q ss_pred EEEEccCCCcceEEEEEEeCCcceEEEEEccC
Q 022184 202 LCRFSKDGTKPFLFCTVQRGDKALLAVYDIST 233 (301)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 233 (301)
.+....++.. ++..+..|..+..++..
T Consensus 205 ~~~~v~~~~~-----l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 205 KVLSVKENPY-----LLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEECTTCSE-----EEEEETTSEEEEEEGGG
T ss_pred EEEEECCCCe-----EEEEECCCceEEEEHHH
Confidence 5555444444 35556777888887754
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.57 E-value=56 Score=28.97 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=26.1
Q ss_pred eeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecc
Q 022184 115 QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD 149 (301)
Q Consensus 115 v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 149 (301)
|.++.+ +..++++-+.|.++|+|++++++.+..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 444443 578999999999999999999886544
No 374
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=63.25 E-value=56 Score=26.11 Aligned_cols=142 Identities=9% Similarity=-0.008 Sum_probs=66.4
Q ss_pred CcceEEEECCC--CCeEEEEecCCcEEEEEEcCCcccccccccc--CCC-----------CCCCCCeeEEEEee-CCCEE
Q 022184 64 GDPMTIAVNPS--GDDFVCSTTNGGCKLFEVYGGATDINLLAKK--MPP-----------LQDAGPQKCLSFSV-DGSRF 127 (301)
Q Consensus 64 ~~v~~~~~~~~--~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~--~~~-----------~~~~~~v~~~~~s~-~~~~l 127 (301)
..|.++++.|. ...|.++...+. ||....+.......... ... ......+.++.++| +...|
T Consensus 115 ~~i~~l~~~~~~~~~~l~~g~~~gg--l~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l 192 (394)
T 3b7f_A 115 DHVFWLTPGHASEPGTWYAGTSPQG--LFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHL 192 (394)
T ss_dssp CEEEEEEECCTTSTTCEEEEEETTE--EEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCE
T ss_pred cceeEEEeCCCCCCCEEEEEecCCc--EEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEE
Confidence 35788999872 455666555553 44444332222211100 000 11224578899988 34455
Q ss_pred EEeecCCeEEEEeCCCcceeccccc----C---------CccEEEEEecCC-CcEEEEEeCCCcEEEEeCCCCceEEEEe
Q 022184 128 AAGGVDGHLRIMHWPSLRIILDEPK----A---------HKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLT 193 (301)
Q Consensus 128 ~~~~~dg~i~v~d~~~~~~~~~~~~----~---------~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 193 (301)
..+..++.|...+ +.++.-..... . ...+.++.++|+ ...|..+...+ |...+ ..++.-..+.
T Consensus 193 ~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~ 269 (394)
T 3b7f_A 193 YIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIG 269 (394)
T ss_dssp EEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGG
T ss_pred EEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECC
Confidence 5565455444432 22222111110 0 124889999985 34566555443 43333 2233333222
Q ss_pred ecC-C---CCeeEEEEccCCC
Q 022184 194 RNS-D---EKIELCRFSKDGT 210 (301)
Q Consensus 194 ~~~-~---~~v~~~~~~~~~~ 210 (301)
... . ..+..+.++|...
T Consensus 270 ~~l~~~~~~~~~~i~~~p~~~ 290 (394)
T 3b7f_A 270 DAMPREVGDIGFPIVVHQRDP 290 (394)
T ss_dssp GGSCTTTCSCEEEEEECSSCT
T ss_pred CCCCCCCccceEEEEECCCCC
Confidence 111 1 2356778877443
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=62.69 E-value=52 Score=25.51 Aligned_cols=206 Identities=9% Similarity=0.088 Sum_probs=106.1
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccc-cccc---cCCCCCCCCCeeEEEEe---eCCCEEEEeecCCeE
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDIN-LLAK---KMPPLQDAGPQKCLSFS---VDGSRFAAGGVDGHL 136 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~-~~~~---~~~~~~~~~~v~~~~~s---~~~~~l~~~~~dg~i 136 (301)
+.+..+......+.|+..+..|.++-+....-..... .... ..-.+.....|..+..- .++.+++..+.+|.+
T Consensus 42 D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~ 121 (307)
T 1zi0_A 42 DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTV 121 (307)
T ss_dssp CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEE
T ss_pred CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeE
Confidence 4444444444556677777888766655432111000 0000 11123344556555432 245678899999999
Q ss_pred EEEeCCCcc-------eecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCC-------ceEEEEeecCCCCeeE
Q 022184 137 RIMHWPSLR-------IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-------VAWTFLTRNSDEKIEL 202 (301)
Q Consensus 137 ~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~~v~~ 202 (301)
+-..+.... ....+... +.+..+....+...++..+.+|.+..+....- .-...+....+..+..
T Consensus 122 Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~ 200 (307)
T 1zi0_A 122 KKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVS 200 (307)
T ss_dssp EEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEE
T ss_pred EEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEE
Confidence 988764221 22223323 55555555545556777788888877775421 1122222223334555
Q ss_pred EEEccCCCcceEEEEEEeCCcceEEEEEccCce---------EeeeeeccCCCcEEEEEcCCCCEEEEeeCCCcEEEEeC
Q 022184 203 CRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN---------KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDV 273 (301)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~ 273 (301)
+...+++.. ++..+..|.++-.++.... ....+....+.+-.+....+...++..+.+|.+.-+++
T Consensus 201 ~~~~~~~~~-----ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~ 275 (307)
T 1zi0_A 201 LIVPRGDGA-----ILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRV 275 (307)
T ss_dssp EECCCSSCE-----EEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEG
T ss_pred EEEecCCCE-----EEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEec
Confidence 554444443 4555667778777764321 11112222244444444334455666677787777776
Q ss_pred CC
Q 022184 274 KK 275 (301)
Q Consensus 274 ~~ 275 (301)
..
T Consensus 276 ~~ 277 (307)
T 1zi0_A 276 SE 277 (307)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 376
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=58.41 E-value=69 Score=25.57 Aligned_cols=183 Identities=8% Similarity=-0.019 Sum_probs=83.7
Q ss_pred eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEee-CCCEEEEeecCC----eEEEEeCCCcc---eec
Q 022184 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDG----HLRIMHWPSLR---IIL 148 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg----~i~v~d~~~~~---~~~ 148 (301)
.|.++...| +.+++...+.......... .....|.++++.| +...|.++...| .|...+ +.++ .+.
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~----~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~ 97 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPV----FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEAT 97 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEE----STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECS
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCcc----CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECC
Confidence 566676666 6666554321111111000 1235689999998 344455555454 444332 2222 211
Q ss_pred c---ccc--------CCccEEEEEecCC--CcEEEEEeCCCcEEEEeCCCCceEEEEee------------------cCC
Q 022184 149 D---EPK--------AHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVAWTFLTR------------------NSD 197 (301)
Q Consensus 149 ~---~~~--------~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------------------~~~ 197 (301)
. +.. ....|.++++.|. ...+..+...+.|...+ ..++.-..+.. ...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 98 RPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp BCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred ccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCC
Confidence 1 111 1125778899872 45555555555544443 22222222211 112
Q ss_pred CCeeEEEEccCC-CcceEEEEEEeCCcceEEEEEcc--CceEeee-eecc---------CCCcEEEEEcCC-CCEEEEee
Q 022184 198 EKIELCRFSKDG-TKPFLFCTVQRGDKALLAVYDIS--TWNKIGH-KRLL---------RKPASVLSISLD-GKYLAMGS 263 (301)
Q Consensus 198 ~~v~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~d~~--~~~~~~~-~~~~---------~~~v~~~~~s~~-~~~l~~~~ 263 (301)
..+..+.+.|.. ..+ ..+..++.|...+-. +++.+.. .... ...+..+.++|+ ...|+++.
T Consensus 177 ~~i~~i~~d~~~~~~l-----~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHL-----YIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp CEEEEEEECTTCTTCE-----EEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CceeEEEECCCCCCEE-----EEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 247788898843 332 222223334333221 2222211 0000 124788999985 45666666
Q ss_pred CCCcEEEEe
Q 022184 264 KDGDICVVD 272 (301)
Q Consensus 264 ~d~~i~i~~ 272 (301)
..+ |...+
T Consensus 252 ~~g-l~~s~ 259 (394)
T 3b7f_A 252 HCG-IYRMD 259 (394)
T ss_dssp TTE-EEEEE
T ss_pred CCe-EEEeC
Confidence 544 44444
No 377
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=54.12 E-value=77 Score=24.79 Aligned_cols=194 Identities=9% Similarity=0.005 Sum_probs=105.3
Q ss_pred CCCCeEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEeC---CC------
Q 022184 73 PSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW---PS------ 143 (301)
Q Consensus 73 ~~~~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~---~~------ 143 (301)
|+.+.+++.+.+|.|+--.+...+... .....+.....+..+........|+..+..|.++-+.. +.
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~----~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~ 78 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASN----GQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDL 78 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTT----TCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcC----ccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCC
Confidence 456678888999999877654322100 00112234456666666666677888888888765543 22
Q ss_pred cceecccc--cCCccEEEEEecC---CCcEEEEEeCCCcEEEEeCCCC------ceEEEEeecCCCCeeEEEEccCCCcc
Q 022184 144 LRIILDEP--KAHKSVLDMDFSL---DSEFLATTSTDGSARIWKTEDG------VAWTFLTRNSDEKIELCRFSKDGTKP 212 (301)
Q Consensus 144 ~~~~~~~~--~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (301)
|.++.... .....|..+..-+ ++.+++..+.+|.++-..+..- .-+..+....+..+-.+........
T Consensus 79 G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~- 157 (323)
T 1wp5_A 79 GQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNE- 157 (323)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSE-
T ss_pred CcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCE-
Confidence 22222221 1223455543333 2567889999999998887421 1222222222233444444443443
Q ss_pred eEEEEEEeCCcceEEEEEccCceE-------eeeeec-cCCCcEEEEEcCCCC-EEEEeeCCCcEEEEeCCC
Q 022184 213 FLFCTVQRGDKALLAVYDISTWNK-------IGHKRL-LRKPASVLSISLDGK-YLAMGSKDGDICVVDVKK 275 (301)
Q Consensus 213 ~~~~~~~~~~~~~i~~~d~~~~~~-------~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~ 275 (301)
++..+.+|.+..++...-.. +..+.. ....|.++..-+++. .+++.+..|..+..++..
T Consensus 158 ----i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 158 ----LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp ----EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred ----EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 34556677887777643211 111111 234455554434444 788888888888777653
No 378
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=52.96 E-value=89 Score=25.18 Aligned_cols=172 Identities=7% Similarity=-0.036 Sum_probs=87.8
Q ss_pred eeEeeeCCCcc--eeeeCCceeccccccCCcceEEEEC---CC----CCeEEEEe-cCCcEEEEEEcCCccccccccccC
Q 022184 37 LEIFSFDPKTT--SVYTSPLVTYVFDESEGDPMTIAVN---PS----GDDFVCST-TNGGCKLFEVYGGATDINLLAKKM 106 (301)
Q Consensus 37 ~~i~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~~~~~---~~----~~~l~~~~-~d~~i~~w~~~~~~~~~~~~~~~~ 106 (301)
-+|+.+|..+. ++..........-........+++. |. +.++..+. ..+-|.++|+.+++.-.... ...
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~-~~~ 201 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH-PTF 201 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC-GGG
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc-CCC
Confidence 35666666555 4433222111111124567788887 22 23444443 35679999998876532221 111
Q ss_pred CCC------------CCCCCeeEEEEeeC----CCEEEEeecCCeEEEEeCC-----Ccceec--ccccCC---ccEEEE
Q 022184 107 PPL------------QDAGPQKCLSFSVD----GSRFAAGGVDGHLRIMHWP-----SLRIIL--DEPKAH---KSVLDM 160 (301)
Q Consensus 107 ~~~------------~~~~~v~~~~~s~~----~~~l~~~~~dg~i~v~d~~-----~~~~~~--~~~~~~---~~i~~~ 160 (301)
... .-...+..++++|+ ++.|......+ -++|.+. ...... +..+.. ..-..+
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 110 01247889999997 77777765444 2333332 111111 111111 233456
Q ss_pred Eec-CCCcEEEEEeCCCcEEEEeCCC-C---ceEEEEee-cCCCCeeEEEEccCCC
Q 022184 161 DFS-LDSEFLATTSTDGSARIWKTED-G---VAWTFLTR-NSDEKIELCRFSKDGT 210 (301)
Q Consensus 161 ~~~-~~~~~l~~~~~d~~i~i~d~~~-~---~~~~~~~~-~~~~~v~~~~~~~~~~ 210 (301)
++. .+|.++++--....|..|+..+ . +....+.. ..-..+..+.+.++|.
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG 336 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe
Confidence 675 5787777777888999999875 1 22233322 2222355666665554
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=52.85 E-value=45 Score=28.03 Aligned_cols=74 Identities=15% Similarity=0.171 Sum_probs=42.7
Q ss_pred cceEEEECC----CCC--eEEEEecCCcEEEEEEcCCccc---cccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCe
Q 022184 65 DPMTIAVNP----SGD--DFVCSTTNGGCKLFEVYGGATD---INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (301)
Q Consensus 65 ~v~~~~~~~----~~~--~l~~~~~d~~i~~w~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (301)
..++|+... ++. .+..|..+|.|.-.-+...... .......+..+....+|..|.++++...|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 356666543 233 4557788887765544322110 0111112233334578899999999999999998776
Q ss_pred EEE
Q 022184 136 LRI 138 (301)
Q Consensus 136 i~v 138 (301)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 380
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=51.67 E-value=82 Score=24.38 Aligned_cols=84 Identities=7% Similarity=0.008 Sum_probs=49.6
Q ss_pred cccccCCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccccc-cccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeE
Q 022184 58 VFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDIN-LLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHL 136 (301)
Q Consensus 58 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 136 (301)
.+..+ +.+..+....+...++..+.+|.+..++...-....+ ......-.+.....|.++...+++..+++.+..|.+
T Consensus 141 ~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~ 219 (307)
T 1zi0_A 141 KLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYG 219 (307)
T ss_dssp CCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEE
T ss_pred EECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCce
Confidence 34444 5555555555556777788899888887654222111 011111223344567666655556678888999998
Q ss_pred EEEeCC
Q 022184 137 RIMHWP 142 (301)
Q Consensus 137 ~v~d~~ 142 (301)
+-.++.
T Consensus 220 Kr~~~~ 225 (307)
T 1zi0_A 220 KRTAVA 225 (307)
T ss_dssp EEECGG
T ss_pred EEEEHH
Confidence 888763
No 381
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=50.63 E-value=77 Score=23.78 Aligned_cols=120 Identities=11% Similarity=0.086 Sum_probs=66.4
Q ss_pred CcceEEEECCCCCeEEEEecCCcEEEEEEcCC---ccccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEEEe
Q 022184 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGG---ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMH 140 (301)
Q Consensus 64 ~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d 140 (301)
+.+..+......+.|+..+..|.++-+....- ......... .-.+.....|..+....++.+|+.++..|.++...
T Consensus 33 D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~-~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~ 111 (256)
T 1zvt_A 33 DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTG-KLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCT 111 (256)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGG-TCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeee-eecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeE
Confidence 34444444344556666678887665554321 111111111 22233445677664434566788899999999887
Q ss_pred CCC-------cceecccccCCccEEEEEec-CCCcEEEEEeCCCcEEEEeCCC
Q 022184 141 WPS-------LRIILDEPKAHKSVLDMDFS-LDSEFLATTSTDGSARIWKTED 185 (301)
Q Consensus 141 ~~~-------~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~ 185 (301)
+.. +.....+.. .+.+..+... .++..++..+.+|.+..+....
T Consensus 112 ~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 112 FNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp GGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred HHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 743 222233322 2345444444 3455788888889888887643
No 382
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=49.67 E-value=1.6e+02 Score=27.19 Aligned_cols=37 Identities=8% Similarity=0.082 Sum_probs=31.0
Q ss_pred CCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcceecc
Q 022184 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD 149 (301)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 149 (301)
..+.++...++..++++-+.|+++|+|++.+++++..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 3567777777888999999999999999999887654
No 383
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=41.43 E-value=78 Score=27.81 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=38.0
Q ss_pred eEEEEecCCcEEEEEE-cCCcc--ccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEE
Q 022184 77 DFVCSTTNGGCKLFEV-YGGAT--DINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~-~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 138 (301)
.+..|+.+|.|.-.-+ ..... ...........+....+|..|.++++...|++++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4557788887753322 22111 11111122344456678999999999999999998876665
No 384
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=40.19 E-value=1.8e+02 Score=25.13 Aligned_cols=98 Identities=11% Similarity=0.068 Sum_probs=50.6
Q ss_pred CcEEEEeCCCCceEEEEeecCC------------CCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCceEeeeeecc
Q 022184 176 GSARIWKTEDGVAWTFLTRNSD------------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL 243 (301)
Q Consensus 176 ~~i~i~d~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 243 (301)
..|..||.+.++.......... ..+....+.-||+...++....-..||++ +|... ..|
T Consensus 296 ~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs~~iD~dG~~-L~st~--------~gH 366 (620)
T 2zuy_A 296 TVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGAMAVDHDGTG-LYSTG--------LGH 366 (620)
T ss_dssp CEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETTEEECTTSSE-EEECS--------CCC
T ss_pred eeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEeeeEECCCCCE-EeecC--------CCC
Confidence 3477888877765444332221 12344445566665332211222233332 33321 256
Q ss_pred CCCcEEEEEcCC--CCEEEEeeCC----CcEEEEeCCCceeeccc
Q 022184 244 RKPASVLSISLD--GKYLAMGSKD----GDICVVDVKKMEINHWS 282 (301)
Q Consensus 244 ~~~v~~~~~s~~--~~~l~~~~~d----~~i~i~~~~~~~~~~~~ 282 (301)
...+.--.|.|+ |..++.+.++ .-..++|..+++.+...
T Consensus 367 GDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~ 411 (620)
T 2zuy_A 367 GDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGV 411 (620)
T ss_dssp CSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred CceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEe
Confidence 666666667776 4455555443 14677888888877654
No 385
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=39.73 E-value=71 Score=20.25 Aligned_cols=11 Identities=18% Similarity=0.326 Sum_probs=6.9
Q ss_pred eEEEEccCCCc
Q 022184 201 ELCRFSKDGTK 211 (301)
Q Consensus 201 ~~~~~~~~~~~ 211 (301)
..+.+..+|..
T Consensus 59 ~~l~l~~dGNL 69 (113)
T 3mez_B 59 CFMRLGHSGEL 69 (113)
T ss_dssp CEEEECTTSCE
T ss_pred EEEEEeCCCcE
Confidence 35667777764
No 386
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=38.74 E-value=1.5e+02 Score=23.72 Aligned_cols=80 Identities=13% Similarity=0.000 Sum_probs=45.3
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCcccccc-ccccCCCCCCCCCeeEEEEee-------------------
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINL-LAKKMPPLQDAGPQKCLSFSV------------------- 122 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~------------------- 122 (301)
.+.+..+........++..+.+|.+..++...-....+. .......+.....|.++...+
T Consensus 149 ~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (370)
T 3l6v_A 149 GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVE 228 (370)
T ss_dssp TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------
T ss_pred CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccc
Confidence 455555555555667887888898887876532221111 111111223345565555444
Q ss_pred ----------------CCCEEEEeecCCeEEEEeCC
Q 022184 123 ----------------DGSRFAAGGVDGHLRIMHWP 142 (301)
Q Consensus 123 ----------------~~~~l~~~~~dg~i~v~d~~ 142 (301)
++..+++.+..|..+...+.
T Consensus 229 t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 229 TTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLA 264 (370)
T ss_dssp ------------------CEEEEEETTSEEEEEEGG
T ss_pred ccccccccccccccccCCceEEEeeCCCCEEEEEHH
Confidence 34578888999988888764
No 387
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=37.85 E-value=61 Score=27.59 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=43.4
Q ss_pred cceEEEECCCCC--eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCee-EEEEeeCCCEEEEeecCCeEEE
Q 022184 65 DPMTIAVNPSGD--DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK-CLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 65 ~v~~~~~~~~~~--~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~v 138 (301)
..++++....+. .+..|..+|.|.-..+.......... ..........+|. .|.++++...|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~-e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQY-EMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEE-EEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeE-EEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 456666654333 55678888988776665332110111 1122223345774 8999999999999987765554
No 388
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=37.66 E-value=2.2e+02 Score=25.26 Aligned_cols=74 Identities=12% Similarity=0.178 Sum_probs=46.2
Q ss_pred CCCCeeEEEEeeCCCEEEEeecCCeEEEEeCCCcc-------eecccccCCccEEEEEec-CCCcEEEEEeCCCcEEEEe
Q 022184 111 DAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-------IILDEPKAHKSVLDMDFS-LDSEFLATTSTDGSARIWK 182 (301)
Q Consensus 111 ~~~~v~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d 182 (301)
....|..+--..+..+++.++..|.++.-.+.... ....+.. .+.+..+... ..+..++..+.+|....|.
T Consensus 552 ~~e~i~~~~~~~~~~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~~-~d~lv~~~~~~~~~~~v~l~t~~g~~lrf~ 630 (716)
T 1zvu_A 552 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFP 630 (716)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEE
T ss_pred CCCeEEEEEEecCCceEEEEeCCceEEEecHHHhcccCccceEEEeeCC-CCEEEEEEEecCCCCEEEEEeCCCeEEEEE
Confidence 34566665544467788889999999988764322 2222322 2344444444 3345677888889888888
Q ss_pred CCC
Q 022184 183 TED 185 (301)
Q Consensus 183 ~~~ 185 (301)
...
T Consensus 631 ~~~ 633 (716)
T 1zvu_A 631 VSD 633 (716)
T ss_dssp STT
T ss_pred HHH
Confidence 754
No 389
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=36.12 E-value=1.2e+02 Score=26.13 Aligned_cols=62 Identities=10% Similarity=0.123 Sum_probs=38.1
Q ss_pred eEEEEecCCcEEEEEEcCCcc-ccccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEE
Q 022184 77 DFVCSTTNGGCKLFEVYGGAT-DINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 77 ~l~~~~~d~~i~~w~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 138 (301)
.+..|+.+|.|.-.-...... ...........+....+|..+.++++...|++++.++.++|
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 455777888876544432221 00111112333345578899999999899999988776665
No 390
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=35.01 E-value=2.4e+02 Score=25.00 Aligned_cols=97 Identities=12% Similarity=0.063 Sum_probs=54.3
Q ss_pred CCCcEEEEeCCCCc-------eEEE-EeecCCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce-Eeee-eecc
Q 022184 174 TDGSARIWKTEDGV-------AWTF-LTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN-KIGH-KRLL 243 (301)
Q Consensus 174 ~d~~i~i~d~~~~~-------~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~-~~~~ 243 (301)
..+.|.+.|+.++. .... +.......+..+.|..+ . +++.........|.++|+.+++ .... +...
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~--l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp 393 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--R--VFLATYDNVVAKVVTFTLENEQWTKPVVLKLP 393 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--C--EEEEEEETTEEEEEEECEETTEECCCEEECCC
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--E--EEEEEEECCEEEEEEEECCCCceEEEeccCCC
Confidence 35678899987642 2233 43333445778888876 2 1123333444578888887664 2222 2222
Q ss_pred -CCCcEEEEEcCCCCEE-EEeeC---CCcEEEEeCC
Q 022184 244 -RKPASVLSISLDGKYL-AMGSK---DGDICVVDVK 274 (301)
Q Consensus 244 -~~~v~~~~~s~~~~~l-~~~~~---d~~i~i~~~~ 274 (301)
...+.....++++..+ ++.+. -+.+..+|+.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 394 YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 2456666777776544 43332 2568888876
No 391
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=32.81 E-value=2.6e+02 Score=24.77 Aligned_cols=117 Identities=12% Similarity=0.076 Sum_probs=56.8
Q ss_pred ceeEEEeeeecCCCccEEEecCCccccCCcCceeEeeeCCCcceeeeCCceeccccc-cCCcceEEEECCC-CCeEEEEe
Q 022184 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDE-SEGDPMTIAVNPS-GDDFVCST 82 (301)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~-~~~l~~~~ 82 (301)
+.|..++++|... ..+.++...+ -+|+.+..+..+...... ..... ....|.+|+++|. .+.++.+.
T Consensus 23 g~i~~i~~~p~~~--~~~~~~~~~g--------gv~rS~D~G~tW~~i~~~-~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 23 GFMPGIVFNETEK--DLIYARAAIG--------GAYRWDPSTETWIPLLDH-FQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp SCCCEEEECSSST--TCEEEECSSS--------CEEEEETTTTEEEECCTT-CCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred ceeeEEEECCCCC--CEEEEEecCC--------cEEEeCCCCCCEEECcCc-cCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 3789999997632 2333333211 367666656555331100 00000 1245899999983 34444443
Q ss_pred cC-------CcEEEEEEcCCccccccccccCCC---CCCCCCeeEEEEee-CCCEEEEeec
Q 022184 83 TN-------GGCKLFEVYGGATDINLLAKKMPP---LQDAGPQKCLSFSV-DGSRFAAGGV 132 (301)
Q Consensus 83 ~d-------~~i~~w~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~-~~~~l~~~~~ 132 (301)
.. +...||.-..+............. ......+..++++| +.+.++.+..
T Consensus 92 ~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 92 GMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 21 135677766554433322211110 01112346789988 4456666653
No 392
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=32.25 E-value=1.9e+02 Score=23.08 Aligned_cols=120 Identities=9% Similarity=0.063 Sum_probs=66.9
Q ss_pred CCcceEEEECCCCCeEEEEecCCcEEEEEEcCCccc-----cccccccCCCCCCCCCeeEEEEee---CCCEEEEeecCC
Q 022184 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD-----INLLAKKMPPLQDAGPQKCLSFSV---DGSRFAAGGVDG 134 (301)
Q Consensus 63 ~~~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg 134 (301)
.+.+..+......+.|+..+..|.++-+....-... ..... ..-.+.....|.++..-. ++.+|+.++..|
T Consensus 45 ~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~-~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G 123 (370)
T 3l6v_A 45 EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPII-NWIPLESGERVQAVLPVREYADNRYVFMATRNG 123 (370)
T ss_dssp CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGG-GSCCCCTTCCEEEEEEESCCCTTCEEEEEETTS
T ss_pred CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHh-hccCCCCCCEEEEEEEeccCCCCcEEEEEeCCC
Confidence 455666655556667777778887666554321110 00001 111233345565554332 456899999999
Q ss_pred eEEEEeCCCcc-------eecccccCCccEEEEEecCCCcEEEEEeCCCcEEEEeCC
Q 022184 135 HLRIMHWPSLR-------IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE 184 (301)
Q Consensus 135 ~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 184 (301)
.++...+.... ....+.. .+.+-.+........++..+.+|.+..++..
T Consensus 124 ~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 124 TVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp EEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred eEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 99988764322 2222322 3455555555455567777788887777653
No 393
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=31.75 E-value=2.5e+02 Score=24.18 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=17.3
Q ss_pred cCCcceEEEECCCCC-eEEEEecCCc
Q 022184 62 SEGDPMTIAVNPSGD-DFVCSTTNGG 86 (301)
Q Consensus 62 h~~~v~~~~~~~~~~-~l~~~~~d~~ 86 (301)
|...+....|.-||+ .++....+|+
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt 202 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGT 202 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTC
T ss_pred ccCceeEEEcCCCCcceEEEEccCCc
Confidence 556677888888886 5666666665
No 394
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=31.69 E-value=2.4e+02 Score=24.01 Aligned_cols=68 Identities=10% Similarity=-0.055 Sum_probs=39.5
Q ss_pred eeEEEEccCCCcceEEEEEEeCCcceEEEEEccCc----eEeeeeec--cCCCcE-EEEEcCCCCEEEEeeCCCcEEE
Q 022184 200 IELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----NKIGHKRL--LRKPAS-VLSISLDGKYLAMGSKDGDICV 270 (301)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~----~~~~~~~~--~~~~v~-~~~~s~~~~~l~~~~~d~~i~i 270 (301)
.+.++....+.+. +++.|..+|.|.-..+... ..+..+.. ...+|. .+.++++..+|++++.++.++|
T Consensus 402 lT~vav~~~~~~t---V~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYS---VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEE---EEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeE---EEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4445544444432 2456677887765554322 12222322 245775 8999999999999987654443
No 395
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.20 E-value=1.7e+02 Score=24.61 Aligned_cols=66 Identities=17% Similarity=0.143 Sum_probs=39.3
Q ss_pred eeEEEEeeC----CC--EEEEeecCCeEEEEeC-CCcc-------eec--ccccCCccEEEEEecCCCcEEEEEeCCCcE
Q 022184 115 QKCLSFSVD----GS--RFAAGGVDGHLRIMHW-PSLR-------IIL--DEPKAHKSVLDMDFSLDSEFLATTSTDGSA 178 (301)
Q Consensus 115 v~~~~~s~~----~~--~l~~~~~dg~i~v~d~-~~~~-------~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 178 (301)
.+.++...- +. .++.|+.+|.|.=.-+ ..+. .+. .+.....+|..+.++++..+|..++.++.+
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~ 485 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 485 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEE
Confidence 466655432 33 4677888887743332 2211 111 122234689999999999999998887655
Q ss_pred EE
Q 022184 179 RI 180 (301)
Q Consensus 179 ~i 180 (301)
+|
T Consensus 486 ~v 487 (495)
T 1q47_A 486 QL 487 (495)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 396
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=30.32 E-value=3e+02 Score=24.69 Aligned_cols=149 Identities=7% Similarity=-0.039 Sum_probs=72.9
Q ss_pred CCCeeEEEEeeC-CCEEEEeecCCeEEEEeCCCcceeccccc-------CCccEEEEEecCCC-cEEEEEeCCCc----E
Q 022184 112 AGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLRIILDEPK-------AHKSVLDMDFSLDS-EFLATTSTDGS----A 178 (301)
Q Consensus 112 ~~~v~~~~~s~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~-~~l~~~~~d~~----i 178 (301)
.+.|.+++++|. ...++++...+.|...+ +.++.-..+.. ....+.+++++|.. +.++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999994 45677777667665544 23332211211 12369999999843 34444432211 3
Q ss_pred EEEe-CCCCceEEEEeecCC--------CCeeEEEEccCCCcceEEEEEEeCCcceEEE-EEc-cCceEeeeee---ccC
Q 022184 179 RIWK-TEDGVAWTFLTRNSD--------EKIELCRFSKDGTKPFLFCTVQRGDKALLAV-YDI-STWNKIGHKR---LLR 244 (301)
Q Consensus 179 ~i~d-~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~d~-~~~~~~~~~~---~~~ 244 (301)
.||. ...++.-..+..... ..+..+++.|..... +..+...+.|.. -|- ++++.+.... ...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~----v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNE----VWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEE----EEEECSSSCEEEESSTTSSCEEETTSCCCCSTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCE----EEEEeccCCEEEECCCCcccCCCccCccccCCC
Confidence 3443 334544444432110 124568888754331 223332222221 111 2334332211 112
Q ss_pred CCcEEEEEcCC-CCEEEEeeCC
Q 022184 245 KPASVLSISLD-GKYLAMGSKD 265 (301)
Q Consensus 245 ~~v~~~~~s~~-~~~l~~~~~d 265 (301)
..+..+.++|. +..++++..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 45788899884 4456666544
No 397
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=28.30 E-value=1.5e+02 Score=20.55 Aligned_cols=49 Identities=8% Similarity=0.171 Sum_probs=29.3
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEEeCCCceeeccccccccCccEEEEEE
Q 022184 248 SVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF 296 (301)
Q Consensus 248 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 296 (301)
.-+.|.|++.+.+.+...|...=.|+..++....-......-.|+.+.|
T Consensus 113 Ep~eF~p~~~w~a~~~esG~f~dvDLse~eW~DYDEk~~~~VsI~e~~~ 161 (164)
T 1zso_A 113 ELIDFFPSNNFIVEDTKGKLYYDVNLSDQNWCDYNEEHEMCVGIYNLEY 161 (164)
T ss_dssp EEEEECCCSCEEEEETTSCEEEEECCTTSCEEEEETTTTEEEEEEEEEE
T ss_pred eeEEEecCCcEEEEECCCCcEEeeecCCCceeccccCCCCeEEEEEEEE
Confidence 3478999999999987677444567776654433222111334555554
No 398
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=27.40 E-value=1.2e+02 Score=19.04 Aligned_cols=14 Identities=21% Similarity=0.242 Sum_probs=8.7
Q ss_pred EEEEEcCCCCEEEE
Q 022184 248 SVLSISLDGKYLAM 261 (301)
Q Consensus 248 ~~~~~s~~~~~l~~ 261 (301)
..+.+.++|.+++.
T Consensus 85 ~~l~l~~dGnlvl~ 98 (110)
T 3a0c_A 85 YVLVLQQDRNVVIY 98 (110)
T ss_dssp CEEEECTTSCEEEE
T ss_pred EEEEEeCCccEEEE
Confidence 45667777775553
No 399
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=26.18 E-value=2.1e+02 Score=24.71 Aligned_cols=55 Identities=9% Similarity=0.056 Sum_probs=34.0
Q ss_pred EEEEeecCCeEEEE-eCCCcc---e--eccc--ccCCccEEEEEecCCCcEEEEEeCCCcEEE
Q 022184 126 RFAAGGVDGHLRIM-HWPSLR---I--ILDE--PKAHKSVLDMDFSLDSEFLATTSTDGSARI 180 (301)
Q Consensus 126 ~l~~~~~dg~i~v~-d~~~~~---~--~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 180 (301)
.++.|+.+|.|.-. ....+. . +..+ .....+|..+.++++...|..++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 56778888887533 222221 1 1111 123457899999998888888877665554
No 400
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.60 E-value=2.2e+02 Score=25.05 Aligned_cols=71 Identities=21% Similarity=0.229 Sum_probs=43.0
Q ss_pred cceEEEEC----CCCC---eEEEEecCCcEEEEEEcCCccccccccccCCCCCCCCCeeEEEEeeCC--CEEEEeecCCe
Q 022184 65 DPMTIAVN----PSGD---DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDG--SRFAAGGVDGH 135 (301)
Q Consensus 65 ~v~~~~~~----~~~~---~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~ 135 (301)
..++|+.. .+++ .+..|..+|.|.-.-...... ... .....+....+|..|.++++. ..|++++.++.
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~--~~~-ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V 474 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAV--HII-EETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGV 474 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSE--EEE-EEEECCTTCCCCCEEEECCSSSSCEEEEECSSCE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCc--eEE-EEecccCCCCcceeeEeccCCCccEEEEEEcCeE
Confidence 35666653 3443 566788888775543332221 111 122334445788899999987 88998887776
Q ss_pred EEE
Q 022184 136 LRI 138 (301)
Q Consensus 136 i~v 138 (301)
++|
T Consensus 475 ~~v 477 (663)
T 1olz_A 475 VQA 477 (663)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 401
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=22.34 E-value=2.1e+02 Score=24.59 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=42.1
Q ss_pred ceEEEECC----CC--CeEEEEecCCcEEEEEEcCCcc---ccccccccCCCCC---------CCCCeeEEEEeeCCCEE
Q 022184 66 PMTIAVNP----SG--DDFVCSTTNGGCKLFEVYGGAT---DINLLAKKMPPLQ---------DAGPQKCLSFSVDGSRF 127 (301)
Q Consensus 66 v~~~~~~~----~~--~~l~~~~~d~~i~~w~~~~~~~---~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l 127 (301)
.+.|+... ++ ..+..|+.+|.|.-.-+..... ........+..+. ...+|..+.++++...|
T Consensus 405 lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~L 484 (565)
T 3oky_B 405 LTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSL 484 (565)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEE
T ss_pred eEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEE
Confidence 46677653 22 3556788889876443332110 0011111111111 24578899999999999
Q ss_pred EEeecCCeEEEE
Q 022184 128 AAGGVDGHLRIM 139 (301)
Q Consensus 128 ~~~~~dg~i~v~ 139 (301)
++++.++.+++-
T Consensus 485 YV~s~~~V~qVP 496 (565)
T 3oky_B 485 YVAFSTCVIKVP 496 (565)
T ss_dssp EEECSSCEEEEE
T ss_pred EEEecCeEEEee
Confidence 999988877763
No 402
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=22.29 E-value=3e+02 Score=22.03 Aligned_cols=194 Identities=11% Similarity=-0.009 Sum_probs=90.3
Q ss_pred cceEEEECCCCCeEEEEecCCcEEEEEEcCCcccc------ccccccCCCCCCCCCeeEEEEeeCCCEEEEeecCCeEEE
Q 022184 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDI------NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (301)
Q Consensus 65 ~v~~~~~~~~~~~l~~~~~d~~i~~w~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 138 (301)
.|..++.. ..+.+.-..+|.|+.|-........ .........+ ....|..++. .....+.-..+|.|+.
T Consensus 122 ~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~-~~~~i~~va~--G~~hs~alt~~G~v~~ 196 (406)
T 4d9s_A 122 RIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EGIRIKMVAA--GAEHTAAVTEDGDLYG 196 (406)
T ss_dssp CEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGG-TTCCEEEEEE--CSSEEEEEETTSCEEE
T ss_pred CEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEeccc-CCCcEEEEec--CCCeEEEEeCCCCEEE
Confidence 56666653 3445555688999999764322110 0000111111 1123444443 3445556677899999
Q ss_pred EeCCCcce-----------eccccc-CCccEEEEEecCCCcEEEEEeCCCcEEEEeCCCCc-----------eEEEEeec
Q 022184 139 MHWPSLRI-----------ILDEPK-AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGV-----------AWTFLTRN 195 (301)
Q Consensus 139 ~d~~~~~~-----------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------~~~~~~~~ 195 (301)
|-...... ...+.. ....|..++.. ..+.+....+|.|..|-..... ....+...
T Consensus 197 wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~ 274 (406)
T 4d9s_A 197 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEAL 274 (406)
T ss_dssp EECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGG
T ss_pred eeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEeccc
Confidence 96432111 001111 11345555443 3344555678888888643211 01111111
Q ss_pred CCCCeeEEEEccCCCcceEEEEEEeCCcceEEEEEccCce------------EeeeeeccCCCcEEEEEcCCCCEEEEee
Q 022184 196 SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN------------KIGHKRLLRKPASVLSISLDGKYLAMGS 263 (301)
Q Consensus 196 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 263 (301)
....|..++--. .+ .+.-..++.|..|=....- +..........|..++. -..+.++-.
T Consensus 275 ~~~~v~~i~~G~--~h-----s~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~--G~~hs~alt 345 (406)
T 4d9s_A 275 SNSFISQISGGW--RH-----TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSC--GWRHTLAVT 345 (406)
T ss_dssp TTSCEEEEEECS--SE-----EEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEE--CSSEEEEEE
T ss_pred CCCCEEEEEecC--CE-----EEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEe--CCCeEEEEe
Confidence 122344443322 22 2333467888888543211 11111111234555544 234555556
Q ss_pred CCCcEEEEeCC
Q 022184 264 KDGDICVVDVK 274 (301)
Q Consensus 264 ~d~~i~i~~~~ 274 (301)
.+|.|+.|=..
T Consensus 346 ~~G~v~~wG~n 356 (406)
T 4d9s_A 346 ERNNVFAWGRG 356 (406)
T ss_dssp TTSCEEEEECC
T ss_pred CCCCEEEecCC
Confidence 78888888654
No 403
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=21.75 E-value=57 Score=18.57 Aligned_cols=17 Identities=12% Similarity=0.450 Sum_probs=14.2
Q ss_pred CcCceeEeeeCCCccee
Q 022184 33 SPSVLEIFSFDPKTTSV 49 (301)
Q Consensus 33 ~~~~~~i~~~~~~~~~~ 49 (301)
.++.++||.|++....+
T Consensus 36 e~g~iKIykyde~tNeI 52 (72)
T 3kvp_A 36 EDGYIKIYEYNESRNEV 52 (72)
T ss_dssp ETTEEEEEEEETTTTEE
T ss_pred eCCEEEEEEeCCCCCeE
Confidence 57889999999988665
Done!