BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022185
(301 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 261/300 (87%), Positives = 284/300 (94%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV++IQSLGGEV
Sbjct: 271 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEV 330
Query: 61 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 120
LNSR+QKIELNDDGTVK+FLL NG V++GDAYVFATPVDILKL LP+NWK + YF+RL+
Sbjct: 331 HLNSRIQKIELNDDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLD 390
Query: 121 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 180
KLVGVPVIN+HIWFDRKLKNTYDHLLFSRS LLSVYADMS+TCKEYY+PNQSMLELVFAP
Sbjct: 391 KLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAP 450
Query: 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240
AEEWIS SD +II ATM ELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+PNCEPCR
Sbjct: 451 AEEWISRSDDDIIQATMTELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCR 510
Query: 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMC 300
P+QRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD LLA RG+ R+A+AS+
Sbjct: 511 PIQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLATRGQKRMAKASVV 570
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 552 bits (1423), Expect = e-156, Method: Compositional matrix adjust.
Identities = 258/299 (86%), Positives = 287/299 (95%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+P+V+HI+SLGGEV
Sbjct: 265 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEV 324
Query: 61 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 120
+LNSR++KIELNDDGTVK+FLLTNG+ ++GDAYVFA PVDILKL LP+ WKE+ YFK+L+
Sbjct: 325 QLNSRIKKIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLD 384
Query: 121 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 180
KLVGVPVIN+HIWFDRKLKNTYDHLLFSRS+LLSVYADMSLTCKEYY+PN+SMLELVFAP
Sbjct: 385 KLVGVPVINVHIWFDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAP 444
Query: 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240
AEEWIS +DS+IIDATMKEL KLFPDEISADQSKAKI+KYHVVKTPRSVYKTIPNCEPCR
Sbjct: 445 AEEWISRTDSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCR 504
Query: 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 299
PLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGK C+Q+IVQDY LLAA G +L+EA++
Sbjct: 505 PLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAASGPRKLSEATV 563
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 535 bits (1379), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/299 (84%), Positives = 281/299 (93%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+V
Sbjct: 283 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQV 342
Query: 61 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 120
RLNSR++KIELN+DG+VK F+L +G+ I+GDA+VFATPVDI KL LPE+WKE+ YF++LE
Sbjct: 343 RLNSRIKKIELNEDGSVKCFILNDGSTIEGDAFVFATPVDIFKLLLPEDWKEIPYFQKLE 402
Query: 121 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 180
KLVGVPVIN+HIWFDRKLKNT D+LLFSRS LLSVYADMS+TCKEYY+PN+SMLELVFAP
Sbjct: 403 KLVGVPVINVHIWFDRKLKNTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELVFAP 462
Query: 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240
AEEW+S SDSEIIDATMKELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+P CEPCR
Sbjct: 463 AEEWVSRSDSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCR 522
Query: 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 299
LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY LL R + +LAE S+
Sbjct: 523 LLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVGRSQRKLAETSV 581
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/299 (86%), Positives = 285/299 (95%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+V
Sbjct: 284 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQV 343
Query: 61 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 120
RLNSR++KIELN+DG+VK+F+L++G+ I+GDA+VFA PVDI KL LPE+WKE+ YF++LE
Sbjct: 344 RLNSRIKKIELNEDGSVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLE 403
Query: 121 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 180
KLVGVPVIN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYYNPNQSMLELVFAP
Sbjct: 404 KLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSMLELVFAP 463
Query: 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240
AEEWIS SDSEIIDATMKELA LFPDEISADQSKAKI+KYHVVKTPRSVYKT+P CEPCR
Sbjct: 464 AEEWISRSDSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCR 523
Query: 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 299
PLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY LL R + +L+EAS+
Sbjct: 524 PLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVGRSQKKLSEASV 582
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust.
Identities = 249/291 (85%), Positives = 273/291 (93%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+HIQSLGG
Sbjct: 270 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGRA 329
Query: 61 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 120
+LNSR+QKIELN DGTVK+F+L NGN+I GDAYV A PVDILKL LP+ W+E+ YF++L+
Sbjct: 330 QLNSRLQKIELNPDGTVKHFVLGNGNIITGDAYVVAAPVDILKLLLPQEWREIPYFQKLD 389
Query: 121 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 180
KLVGVPVIN+HIWFDRKLKNTYDHLLF+RS LLSVYADMS+TCKEYY+PN+SMLELVFAP
Sbjct: 390 KLVGVPVINVHIWFDRKLKNTYDHLLFTRSPLLSVYADMSVTCKEYYDPNRSMLELVFAP 449
Query: 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240
AEEWIS SDSEII+ TMKELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCR
Sbjct: 450 AEEWISRSDSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCR 509
Query: 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGK 291
PLQRSP+EGFYLAGDYT QKYLASMEGAVLSGKLCAQ+IVQDY LL R K
Sbjct: 510 PLQRSPIEGFYLAGDYTNQKYLASMEGAVLSGKLCAQSIVQDYELLVRRSK 560
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 516 bits (1330), Expect = e-146, Method: Compositional matrix adjust.
Identities = 249/289 (86%), Positives = 278/289 (96%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEV
Sbjct: 277 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEV 336
Query: 61 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 120
RLNSR+QKIELN DGTVK+F LT+G I GDAYVFATPVDILKL +P+ WKE++YFK+LE
Sbjct: 337 RLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLE 396
Query: 121 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 180
KLVGVPVIN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SMLELVFAP
Sbjct: 397 KLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAP 456
Query: 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240
AEEW+ SD+EII+ATM+ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCR
Sbjct: 457 AEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCR 516
Query: 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 289
PLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ++V+DY +L+ R
Sbjct: 517 PLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRR 565
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 516 bits (1330), Expect = e-146, Method: Compositional matrix adjust.
Identities = 249/289 (86%), Positives = 278/289 (96%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEV
Sbjct: 277 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEV 336
Query: 61 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 120
RLNSR+QKIELN DGTVK+F LT+G I GDAYVFATPVDILKL +P+ WKE++YFK+LE
Sbjct: 337 RLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLE 396
Query: 121 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 180
KLVGVPVIN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SMLELVFAP
Sbjct: 397 KLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAP 456
Query: 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240
AEEW+ SD+EII+ATM+ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCR
Sbjct: 457 AEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCR 516
Query: 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 289
PLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ++V+DY +L+ R
Sbjct: 517 PLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRR 565
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/294 (84%), Positives = 273/294 (92%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+HI+S GGEV
Sbjct: 269 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGEV 328
Query: 61 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE 120
RLNSR++KIELN DGTVK+F L++G I GDAYV ATPVDI KL +P+ W E+ YFK+LE
Sbjct: 329 RLNSRIKKIELNPDGTVKHFALSDGTQITGDAYVCATPVDIFKLLVPQEWSEITYFKKLE 388
Query: 121 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 180
KLVGVPVIN+HIWFDRKL NTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SMLELVFAP
Sbjct: 389 KLVGVPVINVHIWFDRKLNNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAP 448
Query: 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240
A+EWI SD+EIIDATM+ELAKLFPDEI+ADQSKAKI+KYH+VKTPRSVYKT+PNCEPCR
Sbjct: 449 ADEWIGRSDTEIIDATMEELAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNCEPCR 508
Query: 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRL 294
PLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ+IVQDY LA R + L
Sbjct: 509 PLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDYSRLALRSQKSL 562
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 357 bits (917), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 181/305 (59%), Positives = 222/305 (72%), Gaps = 7/305 (2%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
M+KALNFI+PDE+S +L ALNRFLQEK GS MAFLDG PPERLC PIVEH+Q+ GG+V
Sbjct: 172 MAKALNFIDPDEISATVVLTALNRFLQEKKGSMMAFLDGAPPERLCQPIVEHVQARGGDV 231
Query: 61 RLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKLQLPENWKEMAY 115
LN+ +++ LNDD +V+ F + +I+ DAYV A PVD LKL LP+ WK M Y
Sbjct: 232 LLNAPLKEFVLNDDSSVQAFRIAGIKGQEEQLIEADAYVSALPVDPLKLLLPDAWKAMPY 291
Query: 116 FKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE 175
F++L+ L GVPVINIH+WFDRKL + DHLLFSRS LLSVYADMS TC+EY +P++SMLE
Sbjct: 292 FQQLDGLQGVPVINIHLWFDRKLTDI-DHLLFSRSPLLSVYADMSNTCREYEDPDRSMLE 350
Query: 176 LVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPN 235
LVFAPA++WI SD +I+ ATM E+ KLFP S ++ A++ KY +VKTP SVYK P
Sbjct: 351 LVFAPAKDWIGRSDEDILAATMAEIEKLFPQHFSG-ENPARLRKYKIVKTPLSVYKATPG 409
Query: 236 CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLA 295
+ RP Q SP+ F+L GDYT Q+YLASMEGAVLSGKL AQAI+ L R GR
Sbjct: 410 RQQYRPDQASPIANFFLTGDYTMQRYLASMEGAVLSGKLTAQAIIARQDELQRRSSGRPL 469
Query: 296 EASMC 300
AS
Sbjct: 470 AASQA 474
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 354 bits (908), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/288 (60%), Positives = 216/288 (75%), Gaps = 7/288 (2%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
MSKALNFI+PDE+S +L ALNRFLQEK+GSKMAFLDG PPERLC P+V++I GGEV
Sbjct: 172 MSKALNFIDPDEISATILLTALNRFLQEKNGSKMAFLDGAPPERLCQPLVDYITERGGEV 231
Query: 61 RLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKLQLPENWKEMAY 115
+N +++I LN+DG+VK +L+ VI D YV A PVD LK +P W+E
Sbjct: 232 HINKPLKEILLNEDGSVKGYLIRGLDGAPDEVITADLYVSAMPVDPLKTMVPAPWREYPE 291
Query: 116 FKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE 175
FK+++ L GVPVIN+H+WFDRKL + DHLLFSRS LLSVYADMS TC+EY +P++SMLE
Sbjct: 292 FKQIQGLEGVPVINLHLWFDRKLTDI-DHLLFSRSPLLSVYADMSNTCREYSDPDKSMLE 350
Query: 176 LVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPN 235
LV APA++WI SD EI+ ATM E+ +LFP + D + A+++K HVVKTPRSVYK P
Sbjct: 351 LVLAPAQDWIGKSDEEIVAATMAEIKQLFPQHFNGD-NPARLLKSHVVKTPRSVYKATPG 409
Query: 236 CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283
+ CRP QR+ V FYLAGD+T QKYL SMEGAVLSGK CAQAI D+
Sbjct: 410 RQACRPDQRTSVPNFYLAGDFTMQKYLGSMEGAVLSGKQCAQAIAADF 457
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 164 bits (414), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 169/309 (54%), Gaps = 27/309 (8%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
++ AL FI+ + +S +C+L F + SK+ L G+P E L PI+++IQ+ G +
Sbjct: 178 IAYALGFIDTENISARCMLTVFQMFAAKTEASKLNLLAGSPAEYLHKPILDYIQARGATL 237
Query: 61 RLNSRVQKIE---LNDDGTVKNFLLTNGNVID---GDAYVFATPVDILKLQLPENWKEMA 114
L RV++IE N V + +G+ ++ D Y+ A V ++ LPE W++ +
Sbjct: 238 HLRRRVREIEYTETNGQTVVTGLQIADGDAVERVEADVYLAACDVPGIQRLLPEAWRKWS 297
Query: 115 YFKRLEKLVGVPVINIHIWFD--------RKLKNTYDH------LLFSRSSLLSVYADMS 160
F + KL VPV + + FD R+ ++ DH LL++ + S + D++
Sbjct: 298 EFDNIYKLDAVPVATVQLRFDGWVTELGDREKRHQLDHATGLDNLLYTADADFSCFTDLA 357
Query: 161 LTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 218
L+ K+YY Q S+L+ V P + +I+ + +I +K++ +LFP + + +
Sbjct: 358 LSSPKDYYRKGQGSLLQCVLTPGDPFIAMKNEDIAQHVLKQVHELFPSSRDLNMTWS--- 414
Query: 219 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 278
+VVK +S+Y+ P +P RP Q++P+ F+LAG YT+Q Y+ SMEGA +SG+ A+A
Sbjct: 415 --NVVKLAQSLYREAPGMDPFRPDQKTPIANFFLAGSYTQQDYIDSMEGATISGRRAAKA 472
Query: 279 IVQDYVLLA 287
+++ + A
Sbjct: 473 MLEAQAIAA 481
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 167/309 (54%), Gaps = 28/309 (9%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
++ AL FI+ + +S +C+L F S + L+G+P E L PI E+++ G +
Sbjct: 178 IAYALGFIDTENISARCMLTIFQLFAARTEASVLRMLEGSPQEYLHKPIQEYLEQRGTKF 237
Query: 61 RLNSRVQKIE--LNDDGTVKNFLLTNGNV----IDGDAYVFATPVDILKLQLPENWK-EM 113
+V++I+ + D T L+ N V + DAYV A V +K LPENW+ +
Sbjct: 238 YTRHKVKEIKTKVTDGETRVTGLIINDGVETKTVTADAYVAACDVPGIKNLLPENWRTQW 297
Query: 114 AYFKRLEKLVGVPVINIHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADM 159
+F ++ L VPV + + FD ++L+ + D+LL++ + S +AD+
Sbjct: 298 DFFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDNLLYTSDAEFSCFADL 357
Query: 160 SLTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI 217
+LT +YY P + S+L+LV P + ++ S+ I +K++ LFP +AD + +
Sbjct: 358 ALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPS--AADLN---M 412
Query: 218 VKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQ 277
Y V+K +S+Y+ P + RP Q +P+ F+LAG YT+Q Y+ SMEGA LSG+ AQ
Sbjct: 413 TWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQ 472
Query: 278 AIVQDYVLL 286
AI+ + L
Sbjct: 473 AILANQARL 481
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 154 bits (390), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 28/299 (9%)
Query: 4 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 63
AL FI+ D +S +C+L F + S + L G+P L PI ++I GG L
Sbjct: 260 ALGFIDCDNMSARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIMDKGGRFHLR 319
Query: 64 SRVQKI--ELNDDGT--VKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 116
+++ E + DG+ V + T ++ DAYV A V +K +P+ W+E+ +F
Sbjct: 320 WGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACDVPGIKRLVPQKWRELEFF 379
Query: 117 KRLEKLVGVPVINIHIWFD------------RKLKNT--YDHLLFSRSSLLSVYADMSLT 162
+ KLVGVPV+ + + ++ R+LK D+LL++ + S +AD++L
Sbjct: 380 DNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGLDNLLYTPDADFSCFADLALA 439
Query: 163 C-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY 220
+YY Q S+L+ V P + ++ S+ EII K++ LFP ++
Sbjct: 440 SPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPSS-----QGLEVTWS 494
Query: 221 HVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 279
V+K +S+Y+ P +P RP Q++PVE F+LAG YTKQ Y+ SMEGA LSG+ + I
Sbjct: 495 SVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYI 553
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=ZDS PE=1 SV=1
Length = 588
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 160/317 (50%), Gaps = 29/317 (9%)
Query: 4 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 63
AL FI+ D +S +C+L F + S + L G+P L PI ++I GG L
Sbjct: 260 ALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIIDKGGRFHLR 319
Query: 64 SRVQKI--ELNDDGT--VKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 116
+++ E + DG+ V + T ++ DAYV A V +K +P+ W+E+ +F
Sbjct: 320 WGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACVVPGIKRLVPQKWRELEFF 379
Query: 117 KRLEKLVGVPVINIHIWFD--------------RKLKNTYDHLLFSRSSLLSVYADMSLT 162
+ KL+GVPV+ + + ++ K D+LL++ + S +AD++L
Sbjct: 380 GNIYKLIGVPVVTVQLRYNGWVTELQDLERSRQSKRATGLDNLLYTPDADFSCFADLALA 439
Query: 163 CKE-YYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY 220
E YY Q S+L+ V P + ++ + EII K++ LFP ++
Sbjct: 440 SPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPS-----SQGLEVTWS 494
Query: 221 HVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 280
VVK +S+Y+ P +P RP Q++PVE F+LAG YTKQ Y+ SMEGA LSG+ + I
Sbjct: 495 SVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYIC 554
Query: 281 Q-DYVLLAARGKGRLAE 296
LLA R K AE
Sbjct: 555 DAGEQLLALRKKIAAAE 571
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes
erecta PE=2 SV=1
Length = 587
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 28/308 (9%)
Query: 4 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 63
AL FI+ D +S +C+L + F + S + L G+P L PI ++I GG L
Sbjct: 263 ALGFIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRDYIIEKGGRFHLR 322
Query: 64 SRVQKI----ELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 116
++I N + V + T ++ D Y+ A V +K LP NW+E +F
Sbjct: 323 WGCREILYEKSANGETYVTGLAMSKATQKQIVKADVYIAACDVPGIKRLLPSNWREWEFF 382
Query: 117 KRLEKLVGVPVINIHIWFD------------RKLKNT--YDHLLFSRSSLLSVYADMSLT 162
+ KLVGVPV+ + + ++ R+L+ D+LL++ + S +AD++L
Sbjct: 383 DNIYKLVGVPVVTVQLRYNGWVTELQDVERSRQLRQAAGLDNLLYTPDADFSCFADLALA 442
Query: 163 CKE-YYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY 220
E YY Q S+L+ V P + ++ + EII K++ LFP ++
Sbjct: 443 SPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFPSS-----QGLEVTWS 497
Query: 221 HVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 280
VVK +S+Y+ P +P RP Q++PV+ F+LAG YTKQ Y+ SMEGA LSG+ + I
Sbjct: 498 SVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAFIC 557
Query: 281 QDYVLLAA 288
LAA
Sbjct: 558 DAGEELAA 565
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 28/299 (9%)
Query: 4 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 63
AL FI+ D +S +C+L F + S + L G+P L PI ++I GG L
Sbjct: 245 ALGFIDCDNISARCMLTIFTLFATKTEASLLRMLKGSPDVYLSGPIKKYITDRGGRFHLR 304
Query: 64 SRVQKI--ELNDDGT--VKNFLLTNGN---VIDGDAYVFATPVDILKLQLPENWKEMAYF 116
+++ E + DG VK LLT +I DAYV A V +K LP W+E F
Sbjct: 305 WGCREVLYEKSPDGETYVKGLLLTKATSREIIKADAYVAACDVPGIKRLLPSEWREWEMF 364
Query: 117 KRLEKLVGVPVINIHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADMSLT 162
+ KL GVPV+ + + ++ R+L+ D+LL++ + S ++D++L+
Sbjct: 365 DNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDNLLYTADADFSCFSDLALS 424
Query: 163 C-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY 220
+YY Q S+++ V P + ++ + EII K++ +LFP ++
Sbjct: 425 SPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSS-----RGLEVTWS 479
Query: 221 HVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 279
VVK +S+Y+ P +P RP Q++PV+ F+L+G YTKQ Y+ SMEGA LSG+ + I
Sbjct: 480 SVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAYI 538
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 162/304 (53%), Gaps = 27/304 (8%)
Query: 1 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 60
++ AL FI+ + +S +C+L F S + L+G+P E L PI+ ++++ G +V
Sbjct: 178 IAYALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKV 237
Query: 61 RLNSRVQKI---ELNDDGTVKNFLLTNGNVID---GDAYVFATPVDILKLQLPENWKEMA 114
+V++I E V ++ G+ ++ DAYV A + ++ LP+ W++ +
Sbjct: 238 YTRRQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWS 297
Query: 115 YFKRLEKLVGVPVINIHIWFD------------RKLKNT--YDHLLFSRSSLLSVYADMS 160
F + KL VPV + + FD ++LK D+LL++ + S +AD++
Sbjct: 298 EFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLA 357
Query: 161 LTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 218
LT +YY Q S+L+LV P + +I S+ I +K++ +LFP + +
Sbjct: 358 LTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSS-----RELNMT 412
Query: 219 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 278
Y VVK +S+Y+ P + RP Q++P+ F+LAG YT+Q Y+ SMEGA +SG+ A+
Sbjct: 413 WYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKV 472
Query: 279 IVQD 282
I+ +
Sbjct: 473 ILDN 476
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 161/321 (50%), Gaps = 28/321 (8%)
Query: 4 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 63
AL FI+ D +S +C+L + F + S + L G+P L PI ++I GG + L
Sbjct: 237 ALGFIDCDNMSARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLR 296
Query: 64 SRVQKIELNDDGTVKNFLL-------TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 116
++I + + ++ TN ++ D YV A V +K LP+ W+E +F
Sbjct: 297 WGCREILYDKSADGETYVTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFF 356
Query: 117 KRLEKLVGVPVINIHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADMSLT 162
+ +L GVPV+ + + ++ R+LK D+LL++ + S +AD++L
Sbjct: 357 NDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALA 416
Query: 163 C-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY 220
+YY Q ++L+ V P + ++ + +II+ ++ +LFP ++
Sbjct: 417 SPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPS-----SRGLEVTWS 471
Query: 221 HVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 280
VVK +S+Y+ P +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+ + I
Sbjct: 472 SVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYIC 531
Query: 281 QDYVLLAARGKGRLAEASMCP 301
LA K + A+ P
Sbjct: 532 DAGEELAELNKKLSSSATAVP 552
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 28/308 (9%)
Query: 4 ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 63
AL FI+ D +S +C+L + F + S + L G+P L PI ++I GG L
Sbjct: 245 ALGFIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLR 304
Query: 64 SRVQKI---EL-NDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 116
++I EL N D + + TN ++ D YV A V +K +P W+E F
Sbjct: 305 WGCREILYDELSNGDTYITGIAMSKATNKKLVKADVYVAACDVPGIKRLIPSEWREWDLF 364
Query: 117 KRLEKLVGVPVINIHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADMSLT 162
+ KLVGVPV+ + + ++ R+L+ D+LL++ + S ++D++L+
Sbjct: 365 DNIYKLVGVPVVTVQLRYNGWVTEMQDLEKSRQLRAAVGLDNLLYTPDADFSCFSDLALS 424
Query: 163 CKE-YYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY 220
E YY Q S+++ V P + ++ + II+ K++ LFP +++
Sbjct: 425 SPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPSS-----QGLEVLWS 479
Query: 221 HVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 280
VVK +S+Y+ P +P RP Q++PV+ F+LAG YTKQ Y+ SMEGA LSG+ A I
Sbjct: 480 SVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYIC 539
Query: 281 QDYVLLAA 288
LAA
Sbjct: 540 SAGEDLAA 547
>sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2
SV=1
Length = 490
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 57 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL-------QLPEN 109
G ++R+ RV KI +G NG DA V A P+ +LK +LPE
Sbjct: 237 GLDIRVGHRVTKIVRRYNGV--KVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPE- 293
Query: 110 WKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNP 169
WK+ A + ++ + + K+ ++ + + + L V A+ S C + N
Sbjct: 294 WKQEA------------INDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNL 341
Query: 170 NQSMLE--LVFAPAEEWIS----CSDSEIIDATMKELAKLFPDEI----------SADQS 213
+++ LV+ PA + SD + + +L ++ PD + +D +
Sbjct: 342 HKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSDVN 401
Query: 214 KAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 273
Y +V P +Y+ + R PV+ + AG+ T + S+ GA +G
Sbjct: 402 SMGSYSYDIVGKPHDLYERL----------RVPVDNLFFAGEATSSSFPGSVHGAYSTGL 451
Query: 274 LCAQ 277
+ A+
Sbjct: 452 MAAE 455
>sp|Q8H191|PAO4_ARATH Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1
SV=1
Length = 497
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 33/235 (14%)
Query: 59 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 118
++RLN RV K+ + V + N + DA + P+ +LK L + E+ +K
Sbjct: 240 DIRLNHRVTKVVRTSNNKVIVAVEGGTNFV-ADAVIITVPIGVLKANLIQFEPELPQWKT 298
Query: 119 LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE--L 176
+ G+ V N + K+ +D + L + A S C + N +++ L
Sbjct: 299 -SAISGLGVGN-----ENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVL 352
Query: 177 VFAPA----EEWISCSDSEIIDATMKELAKLFPD----------EISADQSKAKIVKYHV 222
V+ A ++ SD + M +L K+FPD D + Y V
Sbjct: 353 VYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDV 412
Query: 223 VKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQ 277
V P +Y P PV+ + G+ ++ S GA L+G +Q
Sbjct: 413 VGMPEDLY----------PRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQ 457
>sp|P55349|Y4AB_RHISN Uncharacterized protein y4aB OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00450 PE=4 SV=1
Length = 417
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDG--DAYVFATPVDIL 102
L P V+ ++ G VRL+ +++K+ + + + + + G DA + A P
Sbjct: 205 LVEPAVKLLERRGATVRLSHKLRKLAKSAE-IISELDFGDDKIAVGPDDAVILAVPPRAA 263
Query: 103 KLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLT 162
LP K F+ V+N H FD + +L V
Sbjct: 264 ATLLP-GLKTPTEFRA--------VVNAHFRFDPPV---------GADPILGVVG----- 300
Query: 163 CKEYYNPNQSMLELVFA-PAEEWISCSDSE-IIDATMKELAK-LFPDEISADQSKAKIVK 219
++E +FA P ++ S+ + ++D +E+ + ++ D A ++
Sbjct: 301 ---------GLVEWLFAYPQRLSVTISNGDRLLDIPREEVVRVIWRDVCEAGGISGELPP 351
Query: 220 YHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCA 276
+ +V R+ ++ P RP + + +LAGD+T A++EG+V SG A
Sbjct: 352 WQIVCERRATFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGSVRSGNRAA 408
>sp|Q6ZQ88|KDM1A_MOUSE Lysine-specific histone demethylase 1A OS=Mus musculus GN=Kdm1a
PE=1 SV=2
Length = 853
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 47/272 (17%)
Query: 46 CLPIVEHIQSLGGEVRLNSRVQKIELNDDG----TVKNFLLTNGNVIDGDAYVFATPVDI 101
C+P+ + G +++LN+ V+++ G V + + DA + P+ +
Sbjct: 574 CVPVA---LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGV 630
Query: 102 LKLQ---------LPENWKEMAY----FKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFS 148
LK Q LPE WK A F L K+V + FDR + +L
Sbjct: 631 LKQQPPAVQFVPPLPE-WKTSAVQRMGFGNLNKVV--------LCFDRVFWDPSVNLFGH 681
Query: 149 RSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWI-SCSDSEIIDATMKELAKLFPDE 207
S + ++ L Y P +L LV A + + SD I+ + L +F
Sbjct: 682 VGSTTASRGELFLFWNLYKAP--ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS 739
Query: 208 ISADQSKAKIVKYHVVKTPRSVYKTIPNCE---------------PCRPLQRSPVEGFYL 252
+ + ++ R Y + P P P+ +
Sbjct: 740 AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFF 799
Query: 253 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284
AG++T + Y A++ GA+LSG A I ++
Sbjct: 800 AGEHTIRNYPATVHGALLSGLREAGRIADQFL 831
>sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A
PE=1 SV=2
Length = 852
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 47/272 (17%)
Query: 46 CLPIVEHIQSLGGEVRLNSRVQKIELNDDG----TVKNFLLTNGNVIDGDAYVFATPVDI 101
C+P+ + G +++LN+ V+++ G V + + DA + P+ +
Sbjct: 573 CVPVA---LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGV 629
Query: 102 LKLQ---------LPENWKEMAY----FKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFS 148
LK Q LPE WK A F L K+V + FDR + +L
Sbjct: 630 LKQQPPAVQFVPPLPE-WKTSAVQRMGFGNLNKVV--------LCFDRVFWDPSVNLFGH 680
Query: 149 RSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWI-SCSDSEIIDATMKELAKLFPDE 207
S + ++ L Y P +L LV A + + SD I+ + L +F
Sbjct: 681 VGSTTASRGELFLFWNLYKAP--ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS 738
Query: 208 ISADQSKAKIVKYHVVKTPRSVYKTIPNCE---------------PCRPLQRSPVEGFYL 252
+ + ++ R Y + P P P+ +
Sbjct: 739 AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFF 798
Query: 253 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284
AG++T + Y A++ GA+LSG A I ++
Sbjct: 799 AGEHTIRNYPATVHGALLSGLREAGRIADQFL 830
>sp|P76150|YNEK_ECOLI Uncharacterized protein YneK OS=Escherichia coli (strain K12)
GN=yneK PE=4 SV=1
Length = 371
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 151 SLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISA 210
+L +A+M L ++ NPN+S L V PA S SD +II + KLF
Sbjct: 282 NLFLFFANMLLHYHQFMNPNESDLNDVLMPA----SLSDDKIIKHMARRTLKLF----VK 333
Query: 211 DQSKAKIVKYHVVKT-PRS 228
+++ K+ +VK PRS
Sbjct: 334 NETPPKVTHEDLVKNRPRS 352
>sp|A7HDA9|PURA_ANADF Adenylosuccinate synthetase OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=purA PE=3 SV=1
Length = 431
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 5/39 (12%)
Query: 103 KLQLPENWKEM-----AYFKRLEKLVGVPVINIHIWFDR 136
KL+ +W ++ AY KR+E+LVGVPV+ + + DR
Sbjct: 381 KLEDLRSWDDLPPRARAYVKRVEQLVGVPVVGLSVGADR 419
>sp|Q48A17|PURA_COLP3 Adenylosuccinate synthetase OS=Colwellia psychrerythraea (strain
34H / ATCC BAA-681) GN=purA PE=3 SV=1
Length = 431
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 91 DAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDR 136
++ V AT VD+L PEN +AY KR+E++ G+PV I DR
Sbjct: 381 ESTVGATSVDVL----PEN--ALAYIKRIEEITGIPVDIISTGPDR 420
>sp|O64411|PAO_MAIZE Polyamine oxidase OS=Zea mays GN=PAO PE=1 SV=1
Length = 500
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 148 SRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDE 207
SR V+ + K+Y + N ++ + + SD + M+ L K+FP +
Sbjct: 352 SRRGYYGVWQEFE---KQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGK 408
Query: 208 ISADQSKAKIVKYHVVKTPRSVYKTIP---NCEPCRPLQRSPVEGFYLAGDYTKQKYLAS 264
D + + ++ + + + P N L R+PV Y G++T + Y
Sbjct: 409 DVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQL-RAPVGRVYFTGEHTSEHYNGY 467
Query: 265 MEGAVLSGKLCAQAIV 280
+ GA LSG A+ ++
Sbjct: 468 VHGAYLSGIDSAEILI 483
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 8 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNP 41
+ PD L M +L L R + H SKMAF+D P
Sbjct: 137 LEPDILKMHPVLDQLARLFAQLHSSKMAFIDSAP 170
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 8 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNP 41
+ PD L M +L L R + H SKMAF+D P
Sbjct: 137 LEPDILKMHPVLDQLARLFAQLHSSKMAFIDSAP 170
>sp|Q9XWP6|LSD1_CAEEL Probable lysine-specific histone demethylase 1 OS=Caenorhabditis
elegans GN=spr-5 PE=1 SV=1
Length = 770
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 169 PNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYH------- 221
P +L E + D II M L K F + A I ++H
Sbjct: 558 PGSKVLCTYIVGEEAMLELPDDVIIQNAMINLQKAFGNNCPRAPISAHITRWHDDELAFG 617
Query: 222 -----VVKTPRSVYKTIPNCEPCRPLQRSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLC 275
++T + + + PL+ S + Y AG++T Y ++++GA +SG
Sbjct: 618 SGAFMSLRTETTSFDDV-----MEPLKTSDGMSRVYFAGEHTCSSYTSTIQGAWMSGARA 672
Query: 276 AQAIVQDYV 284
A I D++
Sbjct: 673 AADISNDHI 681
>sp|P22871|CRTI_ESCVU Phytoene desaturase (lycopene-forming) OS=Escherichia vulneris
GN=crtI PE=3 SV=1
Length = 492
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 49 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDA 92
+V+ LGGE+ LN+RV+++ + D+ V L +G + D DA
Sbjct: 227 MVKLFTDLGGEIELNARVEELVVADN-RVSQVRLADGRIFDTDA 269
>sp|P21900|PURA_DICDI Adenylosuccinate synthetase OS=Dictyostelium discoideum GN=purA
PE=1 SV=1
Length = 427
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 105 QLPENWKEMAYFKRLEKLVGVPVINIHIWFDRK 137
QLP K Y KR+E+LVGVP++ I + +RK
Sbjct: 388 QLPIQAKN--YIKRIEELVGVPIVYIGVGVERK 418
>sp|B1JQ63|CAPP_YERPY Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q66G74|CAPP_YERPS Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|B2JZD9|CAPP_YERPB Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|A7FCZ7|CAPP_YERP3 Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|A4TRH7|CAPP_YERPP Phosphoenolpyruvate carboxylase OS=Yersinia pestis (strain
Pestoides F) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q1CNQ7|CAPP_YERPN Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q8ZA84|CAPP_YERPE Phosphoenolpyruvate carboxylase OS=Yersinia pestis GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q1CBV8|CAPP_YERPA Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|C6DI86|CAPP_PECCP Phosphoenolpyruvate carboxylase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=ppc PE=3 SV=1
Length = 879
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 163 CKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
C++ +++ MLE+VFA A+ W++ D ++D + L K D+++AD
Sbjct: 754 CRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDEKLWPLGKQLRDQLAAD 805
>sp|Q05627|Y202_CLOB8 Uncharacterized protein Cbei_0202 OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=Cbei_0202 PE=4 SV=2
Length = 533
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 49 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFA 96
I E I+ LGGEV NS+++KI DG +++ ++ NG I +A V A
Sbjct: 213 IREEIKRLGGEVNFNSKLEKITYK-DGKLES-IVVNGKNITCEALVLA 258
>sp|A1JI20|CAPP_YERE8 Phosphoenolpyruvate carboxylase OS=Yersinia enterocolitica serotype
O:8 / biotype 1B (strain 8081) GN=ppc PE=3 SV=1
Length = 879
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 159 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 211
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D++ AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLEAD 804
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,806,081
Number of Sequences: 539616
Number of extensions: 4797653
Number of successful extensions: 11689
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 11620
Number of HSP's gapped (non-prelim): 53
length of query: 301
length of database: 191,569,459
effective HSP length: 117
effective length of query: 184
effective length of database: 128,434,387
effective search space: 23631927208
effective search space used: 23631927208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)