Query 022185
Match_columns 301
No_of_seqs 117 out of 1483
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 15:19:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 8.3E-27 2.8E-31 213.1 26.0 257 6-280 163-424 (425)
2 4dgk_A Phytoene dehydrogenase; 99.9 4.1E-26 1.4E-30 212.9 21.8 245 33-288 212-496 (501)
3 1s3e_A Amine oxidase [flavin-c 99.9 7.4E-26 2.5E-30 212.3 18.4 269 6-291 173-462 (520)
4 2vvm_A Monoamine oxidase N; FA 99.9 2.9E-25 9.8E-30 207.0 14.3 263 6-288 215-490 (495)
5 3nrn_A Uncharacterized protein 99.9 3E-23 1E-27 189.5 24.7 256 6-289 156-411 (421)
6 2yg5_A Putrescine oxidase; oxi 99.9 1.9E-24 6.3E-29 199.3 14.8 258 6-283 173-451 (453)
7 1b37_A Protein (polyamine oxid 99.9 1.1E-23 3.8E-28 195.2 13.9 235 37-285 201-460 (472)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 1.9E-23 6.3E-28 193.8 14.4 236 32-287 228-477 (478)
9 3i6d_A Protoporphyrinogen oxid 99.9 9E-24 3.1E-28 195.2 10.8 232 32-283 225-468 (470)
10 2z3y_A Lysine-specific histone 99.9 2.1E-22 7.3E-27 193.6 17.9 232 33-284 392-659 (662)
11 2jae_A L-amino acid oxidase; o 99.9 9.9E-23 3.4E-27 189.6 15.1 235 31-284 228-486 (489)
12 3nks_A Protoporphyrinogen oxid 99.9 1.2E-22 4.1E-27 188.3 14.2 261 5-282 170-473 (477)
13 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 1.4E-21 4.7E-26 173.6 19.7 228 34-282 104-341 (342)
14 2xag_A Lysine-specific histone 99.9 5.9E-22 2E-26 193.6 18.7 237 33-288 563-834 (852)
15 3lov_A Protoporphyrinogen oxid 99.9 6.4E-23 2.2E-27 190.1 8.3 234 31-287 225-469 (475)
16 1sez_A Protoporphyrinogen oxid 99.9 5.1E-23 1.8E-27 192.1 6.1 235 33-286 234-496 (504)
17 2iid_A L-amino-acid oxidase; f 99.9 1.3E-21 4.4E-26 182.5 13.7 238 32-285 231-486 (498)
18 4gut_A Lysine-specific histone 99.9 4E-21 1.4E-25 186.6 15.2 228 32-281 524-775 (776)
19 3k7m_X 6-hydroxy-L-nicotine ox 99.8 6.9E-20 2.4E-24 167.5 17.1 246 6-283 168-426 (431)
20 1rsg_A FMS1 protein; FAD bindi 99.8 1.3E-20 4.3E-25 176.6 11.0 245 35-286 196-510 (516)
21 3ayj_A Pro-enzyme of L-phenyla 99.8 3.2E-20 1.1E-24 177.2 12.8 272 8-287 317-683 (721)
22 4dsg_A UDP-galactopyranose mut 99.8 2.2E-19 7.4E-24 166.8 10.7 260 5-280 163-452 (484)
23 4gde_A UDP-galactopyranose mut 99.8 4.2E-19 1.4E-23 165.8 12.5 232 34-282 214-478 (513)
24 1yvv_A Amine oxidase, flavin-c 99.7 2.9E-15 9.9E-20 132.1 19.8 216 48-286 111-330 (336)
25 2b9w_A Putative aminooxidase; 99.6 2.9E-15 9.8E-20 136.6 13.1 245 7-280 170-423 (424)
26 2bcg_G Secretory pathway GDP d 99.1 2.1E-09 7.1E-14 98.8 18.2 195 32-280 232-438 (453)
27 1d5t_A Guanine nucleotide diss 99.1 3.4E-09 1.2E-13 96.7 16.1 194 32-280 224-427 (433)
28 1v0j_A UDP-galactopyranose mut 99.0 1.9E-11 6.5E-16 110.6 -3.1 115 5-147 165-283 (399)
29 2e1m_C L-glutamate oxidase; L- 99.0 7.9E-11 2.7E-15 94.5 0.4 101 181-286 48-155 (181)
30 3p1w_A Rabgdi protein; GDI RAB 98.9 5.8E-09 2E-13 95.7 10.4 90 10-100 221-313 (475)
31 1vg0_A RAB proteins geranylger 98.9 7.7E-08 2.6E-12 91.0 18.2 117 8-139 341-461 (650)
32 1i8t_A UDP-galactopyranose mut 98.8 5.7E-10 2E-14 99.7 0.2 114 4-148 154-270 (367)
33 2bi7_A UDP-galactopyranose mut 98.6 1.3E-07 4.6E-12 84.8 8.4 98 5-135 159-260 (384)
34 3hdq_A UDP-galactopyranose mut 98.2 7.4E-07 2.5E-11 80.0 3.7 202 4-282 182-390 (397)
35 2gag_B Heterotetrameric sarcos 98.2 0.00011 3.6E-09 65.8 17.2 209 34-282 163-375 (405)
36 3dje_A Fructosyl amine: oxygen 98.1 0.00012 4E-09 66.4 16.4 68 33-101 148-221 (438)
37 1ryi_A Glycine oxidase; flavop 98.1 8.6E-05 2.9E-09 65.9 14.7 208 33-282 152-362 (382)
38 2e1m_B L-glutamate oxidase; L- 98.0 5.7E-06 2E-10 61.9 4.9 103 86-207 4-111 (130)
39 1y56_B Sarcosine oxidase; dehy 98.0 0.0013 4.3E-08 58.3 20.8 202 43-282 149-355 (382)
40 3ps9_A TRNA 5-methylaminomethy 97.9 0.0012 4.2E-08 63.3 20.6 67 33-101 405-473 (676)
41 3pvc_A TRNA 5-methylaminomethy 97.8 0.0019 6.6E-08 62.1 20.5 66 33-100 400-468 (689)
42 3dme_A Conserved exported prot 97.8 0.00026 9E-09 62.1 12.9 58 43-101 150-209 (369)
43 3atr_A Conserved archaeal prot 97.6 0.0021 7.1E-08 58.6 15.9 57 44-101 101-162 (453)
44 3kkj_A Amine oxidase, flavin-c 97.4 0.011 3.6E-07 48.7 17.1 88 186-286 243-330 (336)
45 3ihg_A RDME; flavoenzyme, anth 97.2 0.012 4.3E-07 54.6 16.5 56 44-100 121-182 (535)
46 3cgv_A Geranylgeranyl reductas 97.2 0.018 6.1E-07 50.9 16.6 56 44-100 103-161 (397)
47 3oz2_A Digeranylgeranylglycero 97.1 0.023 7.8E-07 50.0 16.6 55 45-100 104-161 (397)
48 3lxd_A FAD-dependent pyridine 97.1 0.0016 5.4E-08 58.6 8.3 56 43-99 194-249 (415)
49 3nyc_A D-arginine dehydrogenas 97.0 0.00076 2.6E-08 59.5 5.5 66 33-101 142-209 (381)
50 2i0z_A NAD(FAD)-utilizing dehy 97.0 0.0014 4.9E-08 59.6 7.5 66 34-100 125-190 (447)
51 3rp8_A Flavoprotein monooxygen 97.0 0.0013 4.5E-08 58.8 7.1 53 44-100 128-180 (407)
52 3fg2_P Putative rubredoxin red 96.9 0.0016 5.6E-08 58.3 7.2 56 43-99 184-239 (404)
53 4at0_A 3-ketosteroid-delta4-5a 96.9 0.0023 8E-08 59.2 7.9 56 44-99 203-262 (510)
54 3nlc_A Uncharacterized protein 96.9 0.0018 6.3E-08 60.4 7.2 58 43-101 220-277 (549)
55 1y0p_A Fumarate reductase flav 96.7 0.0037 1.3E-07 58.7 8.0 57 43-99 255-315 (571)
56 2uzz_A N-methyl-L-tryptophan o 96.6 0.0038 1.3E-07 54.9 7.0 55 44-101 150-204 (372)
57 1qo8_A Flavocytochrome C3 fuma 96.5 0.0044 1.5E-07 58.1 7.1 57 43-99 250-310 (566)
58 1d4d_A Flavocytochrome C fumar 96.5 0.006 2.1E-07 57.3 8.0 57 43-99 255-315 (572)
59 2dkh_A 3-hydroxybenzoate hydro 96.5 0.33 1.1E-05 46.1 19.8 62 44-106 142-217 (639)
60 3axb_A Putative oxidoreductase 96.4 0.0044 1.5E-07 56.1 6.3 58 43-101 181-254 (448)
61 3v76_A Flavoprotein; structura 96.4 0.0048 1.6E-07 55.6 6.4 63 34-100 124-186 (417)
62 2e1m_A L-glutamate oxidase; L- 96.4 0.0042 1.4E-07 55.1 5.6 61 31-97 309-369 (376)
63 3ef6_A Toluene 1,2-dioxygenase 96.4 0.0054 1.8E-07 55.1 6.4 54 44-99 186-239 (410)
64 1q1r_A Putidaredoxin reductase 96.3 0.0093 3.2E-07 53.9 7.9 57 43-99 191-248 (431)
65 3iwa_A FAD-dependent pyridine 96.3 0.0097 3.3E-07 54.4 8.0 55 43-99 202-256 (472)
66 1fec_A Trypanothione reductase 96.3 0.0092 3.1E-07 54.9 7.8 55 44-99 232-286 (490)
67 2wpf_A Trypanothione reductase 96.3 0.01 3.5E-07 54.7 8.0 55 44-99 236-290 (495)
68 1mo9_A ORF3; nucleotide bindin 96.2 0.0092 3.1E-07 55.4 7.3 57 43-99 255-314 (523)
69 2e4g_A Tryptophan halogenase; 96.2 0.012 4.1E-07 54.9 8.1 57 44-101 195-252 (550)
70 2hqm_A GR, grase, glutathione 96.2 0.0099 3.4E-07 54.5 7.2 57 43-99 226-283 (479)
71 2weu_A Tryptophan 5-halogenase 96.2 0.015 5E-07 53.7 8.3 58 43-101 173-230 (511)
72 1pj5_A N,N-dimethylglycine oxi 96.1 0.0079 2.7E-07 59.1 6.8 66 34-101 140-207 (830)
73 3da1_A Glycerol-3-phosphate de 96.1 0.0084 2.9E-07 56.2 6.6 68 33-101 159-232 (561)
74 1ges_A Glutathione reductase; 96.1 0.012 4.2E-07 53.4 7.5 55 44-99 209-263 (450)
75 2cul_A Glucose-inhibited divis 96.1 0.0085 2.9E-07 49.2 5.9 55 44-100 69-124 (232)
76 2gf3_A MSOX, monomeric sarcosi 96.1 0.01 3.4E-07 52.5 6.7 56 43-101 150-205 (389)
77 2ywl_A Thioredoxin reductase r 96.1 0.015 5E-07 45.5 6.9 53 43-99 56-108 (180)
78 3o0h_A Glutathione reductase; 96.1 0.012 4.2E-07 53.9 7.3 55 43-99 232-286 (484)
79 2oln_A NIKD protein; flavoprot 96.0 0.011 3.8E-07 52.5 6.8 55 43-100 153-207 (397)
80 4dna_A Probable glutathione re 96.0 0.013 4.3E-07 53.5 7.2 55 43-99 211-266 (463)
81 1trb_A Thioredoxin reductase; 96.0 0.019 6.6E-07 49.1 8.1 55 44-99 185-245 (320)
82 2v3a_A Rubredoxin reductase; a 96.0 0.012 4.3E-07 52.1 6.9 55 43-99 187-241 (384)
83 1xdi_A RV3303C-LPDA; reductase 96.0 0.014 4.8E-07 53.8 7.4 55 44-100 224-278 (499)
84 2cdu_A NADPH oxidase; flavoenz 95.9 0.014 4.7E-07 53.0 6.9 56 43-100 191-246 (452)
85 1onf_A GR, grase, glutathione 95.9 0.018 6.2E-07 53.0 7.8 56 43-99 217-273 (500)
86 3nix_A Flavoprotein/dehydrogen 95.9 0.012 4.1E-07 52.6 6.2 57 44-100 107-165 (421)
87 3oc4_A Oxidoreductase, pyridin 95.8 0.02 6.9E-07 52.0 7.6 55 43-100 189-243 (452)
88 2wdq_A Succinate dehydrogenase 95.8 0.02 6.9E-07 53.9 7.8 58 43-100 143-205 (588)
89 2gmh_A Electron transfer flavo 95.8 0.023 8E-07 53.4 8.1 57 44-100 145-216 (584)
90 2gqf_A Hypothetical protein HI 95.8 0.016 5.5E-07 51.8 6.6 63 35-100 102-167 (401)
91 1m6i_A Programmed cell death p 95.7 0.017 5.7E-07 53.2 6.6 54 44-99 227-280 (493)
92 2x3n_A Probable FAD-dependent 95.7 0.014 4.7E-07 51.9 5.9 62 44-106 108-172 (399)
93 2aqj_A Tryptophan halogenase, 95.7 0.028 9.7E-07 52.2 8.1 58 43-101 165-222 (538)
94 2yqu_A 2-oxoglutarate dehydrog 95.6 0.021 7.2E-07 51.9 6.7 56 43-100 208-263 (455)
95 2rgh_A Alpha-glycerophosphate 95.5 0.026 9E-07 52.9 7.2 58 43-101 188-250 (571)
96 3dgh_A TRXR-1, thioredoxin red 95.4 0.039 1.3E-06 50.5 7.7 56 43-99 227-287 (483)
97 2pyx_A Tryptophan halogenase; 95.4 0.05 1.7E-06 50.4 8.5 57 44-101 176-233 (526)
98 3itj_A Thioredoxin reductase 1 95.3 0.042 1.4E-06 47.2 7.4 53 46-99 211-269 (338)
99 2r9z_A Glutathione amide reduc 95.2 0.036 1.2E-06 50.5 6.9 55 43-99 207-262 (463)
100 1k0i_A P-hydroxybenzoate hydro 95.2 0.049 1.7E-06 48.2 7.6 63 44-107 104-170 (394)
101 2zxi_A TRNA uridine 5-carboxym 95.1 0.045 1.5E-06 51.8 7.3 55 44-100 124-179 (637)
102 3ntd_A FAD-dependent pyridine 95.1 0.05 1.7E-06 50.8 7.6 56 43-99 192-265 (565)
103 2gqw_A Ferredoxin reductase; f 95.0 0.054 1.8E-06 48.4 7.5 50 44-99 188-237 (408)
104 2qcu_A Aerobic glycerol-3-phos 95.0 0.043 1.5E-06 50.5 7.0 57 43-101 149-210 (501)
105 3lad_A Dihydrolipoamide dehydr 94.9 0.071 2.4E-06 48.6 8.1 55 43-99 221-278 (476)
106 3ab1_A Ferredoxin--NADP reduct 94.9 0.05 1.7E-06 47.4 6.8 57 43-100 74-130 (360)
107 1zmd_A Dihydrolipoyl dehydroge 94.9 0.062 2.1E-06 49.0 7.6 57 43-100 220-281 (474)
108 3g3e_A D-amino-acid oxidase; F 94.9 0.13 4.3E-06 44.7 9.3 192 43-285 142-336 (351)
109 2bs2_A Quinol-fumarate reducta 94.9 0.049 1.7E-06 52.0 7.0 58 43-101 158-220 (660)
110 1rp0_A ARA6, thiazole biosynth 94.8 0.058 2E-06 45.6 6.8 56 43-99 119-189 (284)
111 3cty_A Thioredoxin reductase; 94.8 0.076 2.6E-06 45.4 7.7 53 46-99 193-250 (319)
112 3alj_A 2-methyl-3-hydroxypyrid 94.8 0.051 1.7E-06 47.9 6.6 53 44-101 108-160 (379)
113 2qa2_A CABE, polyketide oxygen 94.8 0.066 2.3E-06 49.3 7.6 61 44-106 108-172 (499)
114 2h88_A Succinate dehydrogenase 94.8 0.045 1.5E-06 51.9 6.5 57 44-101 156-217 (621)
115 2bc0_A NADH oxidase; flavoprot 94.8 0.056 1.9E-06 49.6 7.0 54 43-99 236-289 (490)
116 3c4n_A Uncharacterized protein 94.6 0.016 5.5E-07 51.8 3.0 56 43-101 172-236 (405)
117 2qae_A Lipoamide, dihydrolipoy 94.6 0.085 2.9E-06 48.0 7.9 54 44-99 216-274 (468)
118 3ces_A MNMG, tRNA uridine 5-ca 94.6 0.057 1.9E-06 51.2 6.7 56 44-101 125-181 (651)
119 2eq6_A Pyruvate dehydrogenase 94.6 0.074 2.5E-06 48.4 7.4 55 43-99 210-269 (464)
120 1y56_A Hypothetical protein PH 94.6 0.078 2.7E-06 48.7 7.5 62 31-99 250-311 (493)
121 2qa1_A PGAE, polyketide oxygen 94.6 0.067 2.3E-06 49.3 7.0 61 44-106 107-171 (500)
122 1v59_A Dihydrolipoamide dehydr 94.6 0.078 2.7E-06 48.4 7.4 56 44-99 225-285 (478)
123 3h8l_A NADH oxidase; membrane 94.5 0.041 1.4E-06 49.1 5.4 51 43-99 218-268 (409)
124 3e1t_A Halogenase; flavoprotei 94.5 0.07 2.4E-06 49.2 7.0 57 44-101 112-172 (512)
125 3ics_A Coenzyme A-disulfide re 94.5 0.052 1.8E-06 51.0 6.1 53 43-99 228-280 (588)
126 2a8x_A Dihydrolipoyl dehydroge 94.5 0.098 3.4E-06 47.5 7.8 55 43-99 212-269 (464)
127 2zbw_A Thioredoxin reductase; 94.4 0.11 3.8E-06 44.6 7.8 54 44-99 192-250 (335)
128 1chu_A Protein (L-aspartate ox 94.4 0.039 1.3E-06 51.4 5.1 59 43-101 138-208 (540)
129 3ab1_A Ferredoxin--NADP reduct 94.4 0.059 2E-06 47.0 6.0 55 44-99 203-261 (360)
130 3r9u_A Thioredoxin reductase; 94.4 0.071 2.4E-06 45.2 6.4 48 51-99 191-242 (315)
131 1n4w_A CHOD, cholesterol oxida 94.3 0.066 2.2E-06 49.4 6.2 58 44-101 222-288 (504)
132 3lzw_A Ferredoxin--NADP reduct 94.2 0.066 2.3E-06 45.8 5.9 55 43-99 67-121 (332)
133 3gwf_A Cyclohexanone monooxyge 94.2 0.085 2.9E-06 49.1 6.8 56 44-99 88-145 (540)
134 1ebd_A E3BD, dihydrolipoamide 94.2 0.089 3.1E-06 47.7 6.9 56 43-100 211-269 (455)
135 4ap3_A Steroid monooxygenase; 94.0 0.087 3E-06 49.1 6.6 56 44-99 100-157 (549)
136 3dgz_A Thioredoxin reductase 2 94.0 0.15 5.1E-06 46.7 8.1 56 43-99 225-285 (488)
137 1kf6_A Fumarate reductase flav 94.0 0.078 2.7E-06 50.0 6.3 58 43-101 134-197 (602)
138 4a9w_A Monooxygenase; baeyer-v 94.0 0.064 2.2E-06 46.3 5.4 56 44-101 77-132 (357)
139 1ojt_A Surface protein; redox- 94.0 0.061 2.1E-06 49.2 5.4 55 43-99 226-284 (482)
140 3dk9_A Grase, GR, glutathione 94.0 0.12 4E-06 47.2 7.3 56 43-99 228-291 (478)
141 3i3l_A Alkylhalidase CMLS; fla 94.0 0.1 3.5E-06 49.1 7.0 57 44-101 129-188 (591)
142 4hb9_A Similarities with proba 94.0 0.049 1.7E-06 48.2 4.6 51 49-100 114-165 (412)
143 2zbw_A Thioredoxin reductase; 93.9 0.094 3.2E-06 45.1 6.3 56 43-100 65-120 (335)
144 1nhp_A NADH peroxidase; oxidor 93.9 0.11 3.6E-06 47.0 6.8 54 43-99 191-244 (447)
145 3cgb_A Pyridine nucleotide-dis 93.8 0.17 5.7E-06 46.2 8.0 54 43-99 227-280 (480)
146 1zk7_A HGII, reductase, mercur 93.8 0.12 4E-06 47.0 6.8 55 43-100 216-270 (467)
147 3fbs_A Oxidoreductase; structu 93.7 0.15 5E-06 42.8 7.0 60 33-99 165-224 (297)
148 4b1b_A TRXR, thioredoxin reduc 93.6 0.14 4.7E-06 47.7 7.1 55 43-99 263-317 (542)
149 1dxl_A Dihydrolipoamide dehydr 93.6 0.13 4.4E-06 46.7 6.8 56 43-100 218-278 (470)
150 3urh_A Dihydrolipoyl dehydroge 93.5 0.15 5E-06 46.7 7.1 55 43-99 239-298 (491)
151 1fl2_A Alkyl hydroperoxide red 93.5 0.21 7E-06 42.3 7.5 52 47-99 183-240 (310)
152 1coy_A Cholesterol oxidase; ox 93.3 0.11 3.6E-06 48.0 5.8 58 44-101 227-293 (507)
153 3f8d_A Thioredoxin reductase ( 93.3 0.23 8E-06 42.0 7.6 50 48-99 194-249 (323)
154 4g6h_A Rotenone-insensitive NA 93.3 0.11 3.9E-06 47.8 5.8 56 42-99 271-330 (502)
155 1fl2_A Alkyl hydroperoxide red 93.2 0.14 4.8E-06 43.4 6.1 56 44-100 57-114 (310)
156 3fmw_A Oxygenase; mithramycin, 93.2 0.062 2.1E-06 50.4 4.1 61 44-106 149-213 (570)
157 2vou_A 2,6-dihydroxypyridine h 93.2 0.15 5.1E-06 45.2 6.4 52 45-100 101-152 (397)
158 3klj_A NAD(FAD)-dependent dehy 93.1 0.089 3E-06 46.7 4.7 51 45-99 64-114 (385)
159 4eqs_A Coenzyme A disulfide re 93.0 0.2 6.7E-06 45.2 7.0 52 42-99 187-238 (437)
160 3f8d_A Thioredoxin reductase ( 93.0 0.17 5.8E-06 42.9 6.3 54 44-100 71-124 (323)
161 3cp8_A TRNA uridine 5-carboxym 93.0 0.14 4.7E-06 48.5 6.1 55 44-100 118-173 (641)
162 3d1c_A Flavin-containing putat 92.9 0.19 6.3E-06 43.8 6.4 53 45-100 90-142 (369)
163 3h28_A Sulfide-quinone reducta 92.8 0.14 4.7E-06 46.1 5.5 50 44-99 201-254 (430)
164 3nlc_A Uncharacterized protein 92.7 0.42 1.4E-05 44.5 8.9 80 193-284 463-543 (549)
165 3lzw_A Ferredoxin--NADP reduct 92.7 0.18 6.3E-06 43.0 6.1 52 46-99 192-248 (332)
166 2bry_A NEDD9 interacting prote 92.7 0.11 3.9E-06 47.7 5.0 59 43-101 166-230 (497)
167 3uox_A Otemo; baeyer-villiger 92.6 0.13 4.6E-06 47.8 5.4 56 44-99 88-145 (545)
168 3k30_A Histamine dehydrogenase 92.6 0.081 2.8E-06 50.8 3.9 51 45-99 569-622 (690)
169 3vrd_B FCCB subunit, flavocyto 92.5 0.052 1.8E-06 48.2 2.4 45 53-99 212-256 (401)
170 2q0l_A TRXR, thioredoxin reduc 92.5 0.29 1E-05 41.4 7.1 52 47-99 182-239 (311)
171 2xdo_A TETX2 protein; tetracyc 92.3 0.12 4.2E-06 45.7 4.6 52 46-101 131-182 (398)
172 2q7v_A Thioredoxin reductase; 92.3 0.41 1.4E-05 40.8 7.9 51 47-99 191-247 (325)
173 3ic9_A Dihydrolipoamide dehydr 92.2 0.34 1.2E-05 44.4 7.5 54 43-99 215-272 (492)
174 1jnr_A Adenylylsulfate reducta 92.0 0.3 1E-05 46.4 7.1 58 43-100 151-217 (643)
175 2q0l_A TRXR, thioredoxin reduc 91.9 0.24 8.2E-06 41.9 5.8 53 44-99 60-112 (311)
176 2gv8_A Monooxygenase; FMO, FAD 91.8 0.2 6.9E-06 45.2 5.4 55 44-100 116-176 (447)
177 1w4x_A Phenylacetone monooxyge 91.7 0.27 9.1E-06 45.7 6.3 55 45-99 96-152 (542)
178 2e5v_A L-aspartate oxidase; ar 91.7 0.19 6.5E-06 45.8 5.2 57 43-101 119-176 (472)
179 1lvl_A Dihydrolipoamide dehydr 91.6 0.21 7.1E-06 45.3 5.4 53 43-99 212-266 (458)
180 1vdc_A NTR, NADPH dependent th 91.6 0.31 1E-05 41.7 6.1 53 44-100 71-123 (333)
181 3gyx_A Adenylylsulfate reducta 91.5 0.25 8.6E-06 47.1 5.9 57 43-99 166-231 (662)
182 1xhc_A NADH oxidase /nitrite r 91.4 0.18 6.2E-06 44.3 4.5 49 44-99 184-232 (367)
183 2xve_A Flavin-containing monoo 91.3 0.38 1.3E-05 43.7 6.7 56 43-99 101-164 (464)
184 3s5w_A L-ornithine 5-monooxyge 91.2 0.45 1.5E-05 42.9 7.2 55 43-99 310-375 (463)
185 2gjc_A Thiazole biosynthetic e 91.2 0.56 1.9E-05 40.5 7.3 41 43-83 146-192 (326)
186 3c96_A Flavin-containing monoo 91.2 0.37 1.3E-05 42.8 6.4 55 44-101 108-169 (410)
187 4fk1_A Putative thioredoxin re 91.1 0.4 1.4E-05 40.6 6.3 64 30-97 169-232 (304)
188 1vdc_A NTR, NADPH dependent th 91.1 0.58 2E-05 40.0 7.4 69 31-99 182-257 (333)
189 1c0p_A D-amino acid oxidase; a 90.8 1.1 3.8E-05 38.8 9.2 44 43-101 142-185 (363)
190 2q7v_A Thioredoxin reductase; 90.8 0.59 2E-05 39.8 7.2 54 44-99 66-121 (325)
191 1hyu_A AHPF, alkyl hydroperoxi 90.8 0.39 1.3E-05 44.3 6.3 56 44-100 268-325 (521)
192 3fpz_A Thiazole biosynthetic e 90.5 0.15 5.3E-06 43.8 3.2 41 244-284 280-325 (326)
193 3jsk_A Cypbp37 protein; octame 90.5 0.71 2.4E-05 40.1 7.4 58 43-100 160-250 (344)
194 3d1c_A Flavin-containing putat 90.4 0.29 1E-05 42.5 4.9 52 46-99 217-270 (369)
195 3itj_A Thioredoxin reductase 1 89.5 0.64 2.2E-05 39.6 6.3 53 44-99 85-140 (338)
196 2a87_A TRXR, TR, thioredoxin r 89.4 0.6 2.1E-05 40.0 6.1 52 44-99 72-124 (335)
197 3sx6_A Sulfide-quinone reducta 89.4 0.57 2E-05 42.0 6.2 51 44-98 209-266 (437)
198 3hyw_A Sulfide-quinone reducta 89.4 0.51 1.7E-05 42.3 5.8 53 43-99 200-254 (430)
199 3s5w_A L-ornithine 5-monooxyge 89.2 0.49 1.7E-05 42.7 5.6 55 45-99 129-190 (463)
200 4gcm_A TRXR, thioredoxin reduc 89.0 0.59 2E-05 39.6 5.7 43 242-285 265-307 (312)
201 1kdg_A CDH, cellobiose dehydro 89.0 0.47 1.6E-05 44.0 5.4 54 47-101 199-261 (546)
202 4fk1_A Putative thioredoxin re 88.9 0.91 3.1E-05 38.3 6.8 54 45-99 62-115 (304)
203 1trb_A Thioredoxin reductase; 88.7 0.95 3.2E-05 38.3 6.8 53 44-100 63-115 (320)
204 1cjc_A Protein (adrenodoxin re 88.4 0.79 2.7E-05 41.5 6.3 44 56-99 270-331 (460)
205 3fbs_A Oxidoreductase; structu 88.3 0.72 2.5E-05 38.4 5.7 54 44-100 57-111 (297)
206 1hyu_A AHPF, alkyl hydroperoxi 88.3 1.1 3.8E-05 41.3 7.4 52 47-99 394-451 (521)
207 2ywl_A Thioredoxin reductase r 88.2 0.91 3.1E-05 34.9 5.9 49 244-294 132-180 (180)
208 2jbv_A Choline oxidase; alcoho 88.2 0.54 1.8E-05 43.7 5.2 46 55-100 221-272 (546)
209 3kd9_A Coenzyme A disulfide re 88.1 0.87 3E-05 40.9 6.4 53 43-99 190-242 (449)
210 2gag_A Heterotetrameric sarcos 88.0 0.91 3.1E-05 45.3 7.0 50 50-99 323-381 (965)
211 3qfa_A Thioredoxin reductase 1 86.9 1.4 4.8E-05 40.5 7.1 56 43-99 250-313 (519)
212 2r0c_A REBC; flavin adenine di 86.6 1.3 4.4E-05 41.1 6.8 51 45-100 140-195 (549)
213 2a87_A TRXR, TR, thioredoxin r 86.1 0.88 3E-05 39.0 5.1 45 53-99 201-250 (335)
214 1q1r_A Putidaredoxin reductase 86.0 0.96 3.3E-05 40.5 5.5 46 50-99 67-112 (431)
215 2x8g_A Thioredoxin glutathione 85.9 2.2 7.4E-05 40.0 8.0 56 43-99 326-393 (598)
216 3l8k_A Dihydrolipoyl dehydroge 85.2 1 3.5E-05 40.8 5.2 51 45-99 216-270 (466)
217 1xhc_A NADH oxidase /nitrite r 85.0 0.79 2.7E-05 40.1 4.3 46 49-99 66-111 (367)
218 3cty_A Thioredoxin reductase; 84.9 1.4 4.8E-05 37.3 5.7 52 44-99 73-124 (319)
219 3ef6_A Toluene 1,2-dioxygenase 84.7 1.1 3.9E-05 39.7 5.3 45 51-99 65-109 (410)
220 3pl8_A Pyranose 2-oxidase; sub 84.6 1 3.6E-05 42.5 5.2 45 56-100 273-323 (623)
221 1ps9_A 2,4-dienoyl-COA reducta 84.6 2.2 7.6E-05 40.6 7.5 50 46-100 576-627 (671)
222 4a5l_A Thioredoxin reductase; 83.9 1.3 4.6E-05 37.2 5.2 53 44-99 67-119 (314)
223 2cul_A Glucose-inhibited divis 82.9 1.4 4.7E-05 35.7 4.6 36 245-283 196-231 (232)
224 3hyw_A Sulfide-quinone reducta 82.6 1.4 4.8E-05 39.4 4.9 48 48-100 61-108 (430)
225 3uox_A Otemo; baeyer-villiger 81.9 1.3 4.6E-05 41.0 4.6 48 47-101 342-391 (545)
226 3r9u_A Thioredoxin reductase; 81.6 2.1 7.3E-05 35.8 5.5 41 243-284 272-312 (315)
227 3lxd_A FAD-dependent pyridine 81.2 1.3 4.5E-05 39.2 4.2 51 45-99 67-117 (415)
228 1lqt_A FPRA; NADP+ derivative, 81.0 1.6 5.5E-05 39.5 4.7 51 47-99 250-324 (456)
229 3h8l_A NADH oxidase; membrane 81.0 2.2 7.4E-05 37.7 5.6 47 246-292 298-344 (409)
230 2gqw_A Ferredoxin reductase; f 80.6 1.4 4.9E-05 39.0 4.2 43 53-99 69-111 (408)
231 3gwf_A Cyclohexanone monooxyge 80.5 0.79 2.7E-05 42.5 2.6 44 52-101 339-384 (540)
232 3qvp_A Glucose oxidase; oxidor 80.0 2.1 7.2E-05 40.1 5.3 46 54-99 238-291 (583)
233 1ju2_A HydroxynitrIle lyase; f 79.6 2.3 8E-05 39.2 5.5 52 49-100 200-260 (536)
234 4a9w_A Monooxygenase; baeyer-v 79.5 1.6 5.5E-05 37.2 4.1 42 243-285 310-353 (357)
235 1nhp_A NADH peroxidase; oxidor 78.8 2.4 8.3E-05 37.9 5.2 50 48-99 61-113 (447)
236 3sx6_A Sulfide-quinone reducta 78.3 2.4 8E-05 37.9 4.9 49 47-100 63-111 (437)
237 3cgb_A Pyridine nucleotide-dis 78.0 2.4 8.3E-05 38.4 5.0 49 49-99 98-150 (480)
238 2vdc_G Glutamate synthase [NAD 77.6 3.3 0.00011 37.4 5.7 44 243-288 405-448 (456)
239 1gte_A Dihydropyrimidine dehyd 77.3 5.5 0.00019 40.0 7.7 51 48-99 375-440 (1025)
240 2vdc_G Glutamate synthase [NAD 75.6 1.5 5E-05 39.8 2.7 48 50-99 309-376 (456)
241 1o94_A Tmadh, trimethylamine d 75.5 2 6.7E-05 41.4 3.8 49 47-99 575-644 (729)
242 2bc0_A NADH oxidase; flavoprot 75.2 3 0.0001 37.9 4.8 47 49-99 98-147 (490)
243 1m6i_A Programmed cell death p 75.2 1.7 5.9E-05 39.6 3.2 41 55-99 102-142 (493)
244 1gpe_A Protein (glucose oxidas 74.5 2.5 8.4E-05 39.6 4.1 46 54-99 242-295 (587)
245 4b63_A L-ornithine N5 monooxyg 74.3 5.8 0.0002 36.2 6.5 55 45-99 147-212 (501)
246 3fim_B ARYL-alcohol oxidase; A 74.0 1.9 6.4E-05 40.2 3.1 47 53-99 218-274 (566)
247 3fg2_P Putative rubredoxin red 73.2 4.8 0.00016 35.4 5.5 50 45-99 59-108 (404)
248 3oc4_A Oxidoreductase, pyridin 73.2 3.9 0.00013 36.7 5.0 49 49-99 64-113 (452)
249 2cdu_A NADPH oxidase; flavoenz 72.7 2.6 9E-05 37.8 3.7 50 48-99 63-115 (452)
250 1ebd_A E3BD, dihydrolipoamide 72.4 5.9 0.0002 35.4 6.0 48 47-99 95-143 (455)
251 3q9t_A Choline dehydrogenase a 71.8 3.4 0.00012 38.6 4.3 45 55-99 218-268 (577)
252 3ics_A Coenzyme A-disulfide re 71.3 5 0.00017 37.3 5.4 51 47-99 97-150 (588)
253 1v59_A Dihydrolipoamide dehydr 70.6 4.8 0.00016 36.3 5.0 37 243-281 313-349 (478)
254 2a8x_A Dihydrolipoyl dehydroge 70.6 6.2 0.00021 35.4 5.7 37 243-281 297-333 (464)
255 3vrd_B FCCB subunit, flavocyto 70.1 7.6 0.00026 33.9 6.1 44 52-100 64-107 (401)
256 2i0z_A NAD(FAD)-utilizing dehy 70.1 4.5 0.00015 36.3 4.6 38 245-282 402-442 (447)
257 4ap3_A Steroid monooxygenase; 68.9 2.4 8.2E-05 39.3 2.6 45 50-101 350-396 (549)
258 3kd9_A Coenzyme A disulfide re 68.0 3.4 0.00012 37.0 3.3 42 54-99 70-112 (449)
259 4a5l_A Thioredoxin reductase; 67.0 12 0.00041 31.1 6.5 41 243-284 272-312 (314)
260 3ntd_A FAD-dependent pyridine 66.9 5.8 0.0002 36.6 4.8 43 55-99 70-115 (565)
261 1pn0_A Phenol 2-monooxygenase; 66.7 7.4 0.00025 37.0 5.5 36 248-283 351-389 (665)
262 3h28_A Sulfide-quinone reducta 66.4 1.8 6.3E-05 38.5 1.2 49 47-100 60-108 (430)
263 1dxl_A Dihydrolipoamide dehydr 65.8 8.7 0.0003 34.5 5.6 37 243-281 305-341 (470)
264 3t37_A Probable dehydrogenase; 64.1 6.4 0.00022 35.9 4.5 49 56-105 224-275 (526)
265 1ojt_A Surface protein; redox- 63.2 7.9 0.00027 35.0 4.9 37 243-281 312-348 (482)
266 2gqf_A Hypothetical protein HI 61.9 5.2 0.00018 35.4 3.3 36 245-280 361-399 (401)
267 2qae_A Lipoamide, dihydrolipoy 61.3 12 0.00041 33.6 5.7 38 243-281 302-339 (468)
268 2hqm_A GR, grase, glutathione 60.3 13 0.00046 33.4 5.8 37 243-281 310-346 (479)
269 3iwa_A FAD-dependent pyridine 60.3 9 0.00031 34.4 4.7 43 55-99 78-123 (472)
270 2v3a_A Rubredoxin reductase; a 59.0 13 0.00043 32.4 5.3 44 51-99 68-111 (384)
271 1chu_A Protein (L-aspartate ox 58.9 9.6 0.00033 35.1 4.6 40 244-283 364-410 (540)
272 1y56_A Hypothetical protein PH 58.9 8.2 0.00028 35.1 4.1 37 246-285 342-378 (493)
273 1xdi_A RV3303C-LPDA; reductase 58.6 11 0.00039 34.1 5.1 37 243-281 305-341 (499)
274 3ic9_A Dihydrolipoamide dehydr 57.9 12 0.0004 34.0 5.0 37 243-281 301-337 (492)
275 4eqs_A Coenzyme A disulfide re 57.5 18 0.0006 32.2 6.0 47 52-100 66-115 (437)
276 1w4x_A Phenylacetone monooxyge 57.2 9 0.00031 35.3 4.1 47 48-101 343-391 (542)
277 4dna_A Probable glutathione re 56.9 12 0.00042 33.5 4.9 38 243-282 294-331 (463)
278 3l8k_A Dihydrolipoyl dehydroge 56.6 12 0.00042 33.5 4.9 38 243-282 296-333 (466)
279 3dk9_A Grase, GR, glutathione 56.0 13 0.00043 33.5 4.9 38 243-282 319-356 (478)
280 3v76_A Flavoprotein; structura 55.7 5.5 0.00019 35.4 2.4 33 246-278 381-416 (417)
281 1jnr_A Adenylylsulfate reducta 53.2 15 0.00052 34.6 5.0 40 244-283 428-467 (643)
282 3lad_A Dihydrolipoamide dehydr 52.9 15 0.00052 32.9 4.8 37 243-281 306-342 (476)
283 3o0h_A Glutathione reductase; 52.7 15 0.00052 33.1 4.9 38 243-282 314-351 (484)
284 2yqu_A 2-oxoglutarate dehydrog 52.7 14 0.00047 33.0 4.5 37 243-281 290-326 (455)
285 3dgh_A TRXR-1, thioredoxin red 52.7 16 0.00054 32.9 5.0 38 243-281 314-351 (483)
286 3dgz_A Thioredoxin reductase 2 51.8 17 0.00057 32.9 4.9 39 243-282 314-352 (488)
287 3urh_A Dihydrolipoyl dehydroge 51.3 14 0.00048 33.4 4.4 37 243-281 326-362 (491)
288 1ges_A Glutathione reductase; 51.0 17 0.00058 32.4 4.9 37 243-281 291-327 (450)
289 4gcm_A TRXR, thioredoxin reduc 50.8 30 0.001 28.7 6.2 51 45-99 64-114 (312)
290 1d4d_A Flavocytochrome C fumar 50.6 9.2 0.00031 35.5 3.1 38 245-282 525-568 (572)
291 3qfa_A Thioredoxin reductase 1 50.3 18 0.0006 33.1 4.9 38 243-281 342-379 (519)
292 1qo8_A Flavocytochrome C3 fuma 48.9 11 0.00039 34.7 3.4 39 244-282 518-562 (566)
293 1zmd_A Dihydrolipoyl dehydroge 48.8 16 0.00056 32.7 4.4 37 243-281 308-344 (474)
294 3klj_A NAD(FAD)-dependent dehy 48.4 15 0.00052 32.1 4.0 39 243-281 253-293 (385)
295 3cp8_A TRNA uridine 5-carboxym 48.4 17 0.00057 34.4 4.4 35 246-283 377-411 (641)
296 1gte_A Dihydropyrimidine dehyd 48.3 20 0.0007 35.8 5.3 40 243-284 469-508 (1025)
297 1kf6_A Fumarate reductase flav 47.8 19 0.00066 33.6 4.8 41 243-283 368-415 (602)
298 2wpf_A Trypanothione reductase 47.8 21 0.00071 32.4 4.9 37 243-281 318-354 (495)
299 2r9z_A Glutathione amide reduc 47.0 21 0.00073 31.9 4.9 36 244-281 291-326 (463)
300 1fec_A Trypanothione reductase 47.0 22 0.00074 32.2 4.9 37 243-281 314-350 (490)
301 1y0p_A Fumarate reductase flav 47.0 12 0.0004 34.7 3.2 39 244-282 523-567 (571)
302 2gjc_A Thiazole biosynthetic e 46.4 17 0.00058 31.2 3.8 39 246-284 282-325 (326)
303 1zk7_A HGII, reductase, mercur 45.0 20 0.00069 32.0 4.4 37 243-281 297-333 (467)
304 2eq6_A Pyruvate dehydrogenase 44.8 20 0.00069 32.1 4.3 37 243-281 297-333 (464)
305 4at0_A 3-ketosteroid-delta4-5a 44.7 14 0.00048 33.6 3.3 38 244-281 465-508 (510)
306 2gag_A Heterotetrameric sarcos 44.2 19 0.00066 35.8 4.4 40 245-287 408-447 (965)
307 2x8g_A Thioredoxin glutathione 43.7 27 0.00091 32.4 5.1 39 243-282 421-459 (598)
308 3g5s_A Methylenetetrahydrofola 43.6 17 0.0006 32.3 3.5 35 246-283 327-361 (443)
309 3ces_A MNMG, tRNA uridine 5-ca 43.5 22 0.00075 33.6 4.4 35 246-283 383-417 (651)
310 2bs2_A Quinol-fumarate reducta 42.7 26 0.0009 33.2 4.9 41 243-283 381-428 (660)
311 1mo9_A ORF3; nucleotide bindin 42.5 25 0.00086 32.0 4.6 37 243-281 341-377 (523)
312 1lvl_A Dihydrolipoamide dehydr 41.0 27 0.00091 31.2 4.5 37 243-281 293-329 (458)
313 4g6h_A Rotenone-insensitive NA 40.4 30 0.001 31.4 4.8 40 243-282 359-399 (502)
314 2h88_A Succinate dehydrogenase 38.4 15 0.00052 34.5 2.5 39 245-283 387-432 (621)
315 2zxi_A TRNA uridine 5-carboxym 38.3 29 0.00099 32.7 4.3 35 246-283 388-422 (637)
316 3jsk_A Cypbp37 protein; octame 37.8 15 0.00052 31.7 2.2 39 247-285 293-336 (344)
317 2gmh_A Electron transfer flavo 37.0 33 0.0011 31.8 4.6 38 247-284 346-386 (584)
318 4b1b_A TRXR, thioredoxin reduc 37.0 37 0.0013 31.3 4.8 39 243-282 346-384 (542)
319 1rp0_A ARA6, thiazole biosynth 36.2 20 0.00068 29.7 2.7 38 247-284 233-275 (284)
320 3gyx_A Adenylylsulfate reducta 36.0 35 0.0012 32.3 4.6 42 243-284 448-489 (662)
321 2gv8_A Monooxygenase; FMO, FAD 34.8 27 0.00091 31.0 3.4 37 60-100 254-291 (447)
322 2xve_A Flavin-containing monoo 33.6 33 0.0011 30.6 3.9 22 80-101 255-276 (464)
323 1lqt_A FPRA; NADP+ derivative, 33.1 35 0.0012 30.5 3.9 40 245-285 349-388 (456)
324 2wdq_A Succinate dehydrogenase 33.0 24 0.0008 32.9 2.8 38 246-283 379-423 (588)
325 3c4a_A Probable tryptophan hyd 32.9 11 0.00037 32.8 0.5 47 43-102 98-144 (381)
326 1onf_A GR, grase, glutathione 32.5 40 0.0014 30.4 4.3 38 244-281 301-370 (500)
327 3k30_A Histamine dehydrogenase 32.3 29 0.00098 33.0 3.3 35 246-283 640-674 (690)
328 1cjc_A Protein (adrenodoxin re 32.2 36 0.0012 30.5 3.8 38 247-285 359-396 (460)
329 3nix_A Flavoprotein/dehydrogen 30.9 51 0.0018 28.5 4.6 37 248-284 288-327 (421)
330 4b63_A L-ornithine N5 monooxyg 29.3 27 0.00093 31.6 2.5 41 59-99 355-407 (501)
331 2e5v_A L-aspartate oxidase; ar 29.1 20 0.00067 32.3 1.5 39 243-281 325-370 (472)
332 2x3n_A Probable FAD-dependent 26.5 55 0.0019 28.2 4.0 36 248-283 286-324 (399)
333 1o94_A Tmadh, trimethylamine d 25.6 32 0.0011 32.9 2.4 36 245-283 664-699 (729)
334 3c4a_A Probable tryptophan hyd 25.6 64 0.0022 27.7 4.2 34 248-281 262-298 (381)
335 4hb9_A Similarities with proba 24.2 53 0.0018 28.1 3.4 36 248-283 311-349 (412)
336 3c96_A Flavin-containing monoo 23.5 58 0.002 28.3 3.5 34 248-281 303-339 (410)
337 1k0i_A P-hydroxybenzoate hydro 21.7 80 0.0027 27.0 4.1 36 248-283 279-317 (394)
338 2vou_A 2,6-dihydroxypyridine h 21.6 82 0.0028 27.1 4.1 34 248-281 299-335 (397)
339 2gf3_A MSOX, monomeric sarcosi 20.9 88 0.003 26.5 4.2 78 189-282 287-364 (389)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.96 E-value=8.3e-27 Score=213.15 Aligned_cols=257 Identities=17% Similarity=0.218 Sum_probs=188.0
Q ss_pred cCCCCccccHHHHHHHHHHHhhccCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC
Q 022185 6 NFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG 85 (301)
Q Consensus 6 ~~~~~e~~sa~~~~~~~~~~~~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g 85 (301)
+..+++++|+..++..+..+... . ...+++||+ +.++++|++.++++|++|+++++|++|..+ ++++++|++ +|
T Consensus 163 ~~~~~~~~s~~~~~~~~~~~~~~-~--~~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~-~g 236 (425)
T 3ka7_A 163 LSLKSDEVPVEEVFEIIENMYRF-G--GTGIPEGGC-KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIA-DD 236 (425)
T ss_dssp HSSCGGGSBHHHHHHHHHHHHHH-C--SCEEETTSH-HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEE-TT
T ss_pred hCCCcccchHHHHHHHHHHHHhc-C--CccccCCCH-HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEE-CC
Confidence 45788999998776666653211 1 357899996 999999999999999999999999999985 566766777 57
Q ss_pred cEEecCEEEEccChhhHhhcCCch-hh--hcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecC--ccchhhhhcc
Q 022185 86 NVIDGDAYVFATPVDILKLQLPEN-WK--EMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRS--SLLSVYADMS 160 (301)
Q Consensus 86 ~~~~ad~VI~a~p~~~l~~l~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~s 160 (301)
++++||.||+|+|++.+.+|+++. .. +.++.++++++.+++.++++++++++++.. ..+++..+ .+.+ +...|
T Consensus 237 ~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~s 314 (425)
T 3ka7_A 237 RIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH-TGVLLTPYTRRING-VNEVT 314 (425)
T ss_dssp EEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS-SSEEECCSSSSEEE-EECGG
T ss_pred EEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc-CEEEECCChhhcce-EEecc
Confidence 789999999999999998888642 11 345677788889888889999999887643 34444332 2221 22445
Q ss_pred cccccccCCCCcEEEEEecCCCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCC
Q 022185 161 LTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 240 (301)
Q Consensus 161 ~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 240 (301)
..+++++|+|++++.+.+....+..+. +++.++.++++|++++|+.. .+++ .+.+|+.+.+.+.++. ..+
T Consensus 315 ~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~~------~~~~--~v~~~~~~~P~~~~~~-~~~ 384 (425)
T 3ka7_A 315 QADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGKR------YEVL--LIQSYHDEWPVNRAAS-GTD 384 (425)
T ss_dssp GTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTCC------EEEE--EEEEEBTTBCSBSSCT-TCC
T ss_pred CCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCCc------eEEE--EEEEECCCcccccccc-CCC
Confidence 567888999988876654322111122 34567999999999999842 2333 4456666655555553 345
Q ss_pred CCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHH
Q 022185 241 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 280 (301)
Q Consensus 241 ~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~ 280 (301)
+...+|++|||+||||+.+.++.+|++|+.||+.+|++|+
T Consensus 385 ~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 385 PGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp CCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred CCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 6778899999999999998665799999999999999886
No 2
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.94 E-value=4.1e-26 Score=212.92 Aligned_cols=245 Identities=18% Similarity=0.214 Sum_probs=140.8
Q ss_pred eEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhH-hhcCCchhh
Q 022185 33 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL-KLQLPENWK 111 (301)
Q Consensus 33 ~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l-~~l~~~~~~ 111 (301)
+.+||+||+ ++|+++|++.++++|++|+++++|++|+.. ++++++|++.||++++||.||++++++.+ .+|+++...
T Consensus 212 G~~~p~GG~-~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~ 289 (501)
T 4dgk_A 212 GVWFPRGGT-GALVQGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPA 289 (501)
T ss_dssp CEEEETTHH-HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC--------------
T ss_pred CeEEeCCCC-cchHHHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcccccc
Confidence 568999996 999999999999999999999999999994 67788899999999999999999987655 567765422
Q ss_pred hcHHHHHHhhcCCc-CeEEEEEEecccCCC-ccceeeeecC--ccc-h------------h-hhhcccccccccCCCCcE
Q 022185 112 EMAYFKRLEKLVGV-PVINIHIWFDRKLKN-TYDHLLFSRS--SLL-S------------V-YADMSLTCKEYYNPNQSM 173 (301)
Q Consensus 112 ~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~-~~~~~~~~~~--~~~-~------------~-~~~~s~~~~~~~~~g~~~ 173 (301)
+....+.+++.+++ +.+++++.++++... ...++++... ... . + ....|..+++++|+|+++
T Consensus 290 ~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~ 369 (501)
T 4dgk_A 290 AVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGS 369 (501)
T ss_dssp -------------CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEE
T ss_pred chhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCce
Confidence 33344556666664 577899999877643 2222333211 000 0 0 011233456778888877
Q ss_pred EEEE-ecCCCccCCC----ChHHHHHHHHHHHHHhC-CCCccccccCceEEEEEEeecCCcc-----------eecCCC-
Q 022185 174 LELV-FAPAEEWISC----SDSEIIDATMKELAKLF-PDEISADQSKAKIVKYHVVKTPRSV-----------YKTIPN- 235 (301)
Q Consensus 174 l~~~-~~~~~~~~~~----~~~~~~~~~~~~l~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~g- 235 (301)
+.+. ..+...+.+. .++++.+++++.|++.+ |++++ .++. ....+|... |...+.
T Consensus 370 ~~~~~~~p~~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~~------~i~~-~~~~tP~~~~~~~~~~~G~~~g~~~~~ 442 (501)
T 4dgk_A 370 YYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGLRS------QLVT-HRMFTPFDFRDQLNAYHGSAFSVEPVL 442 (501)
T ss_dssp EEEEEEECCTTTSCCCHHHHHHHHHHHHHHHHHHHTCTTHHH------HEEE-EEEECTTTTC-----------------
T ss_pred EEEEEecCccccccccHHHHHHHHHHHHHHHHHHhhCCChHH------ceEE-EEECCHHHHHHHcCCCCccccChhcch
Confidence 6543 3333222222 24678888999998865 88752 3333 334455421 111111
Q ss_pred -C-CCCCCCC-CCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhh
Q 022185 236 -C-EPCRPLQ-RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 288 (301)
Q Consensus 236 -~-~~~~~~~-~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~~ 288 (301)
+ ..+||.. .+|++|||+||+++.+| +|++||+.||+.||+.|++++.-++-
T Consensus 443 ~q~~~~RP~~~~t~i~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 443 TQSAWFRPHNRDKTITNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp -------------CCTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC----
T ss_pred hhccccCCCCCCCCCCCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 1 1246643 47899999999999887 79999999999999999999865554
No 3
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.94 E-value=7.4e-26 Score=212.28 Aligned_cols=269 Identities=16% Similarity=0.155 Sum_probs=183.3
Q ss_pred cCCCCccccHHHHHHHHHHH------hhccCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEE
Q 022185 6 NFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKN 79 (301)
Q Consensus 6 ~~~~~e~~sa~~~~~~~~~~------~~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~ 79 (301)
+..+++++|+.+++.++... +....+....+++||+ ++|+++|++.+ |++|+++++|++|+.+ ++.+.
T Consensus 173 ~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V~~i~~~-~~~v~- 246 (520)
T 1s3e_A 173 VTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGS-GQVSERIMDLL---GDRVKLERPVIYIDQT-RENVL- 246 (520)
T ss_dssp HSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCT-HHHHHHHHHHH---GGGEESSCCEEEEECS-SSSEE-
T ss_pred cCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCH-HHHHHHHHHHc---CCcEEcCCeeEEEEEC-CCeEE-
Confidence 46789999999886555421 1112333457889996 99999999987 7899999999999985 44565
Q ss_pred EEEeCCcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCc--cceeee--ecCccchh
Q 022185 80 FLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT--YDHLLF--SRSSLLSV 155 (301)
Q Consensus 80 V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~--~~~~~~~~ 155 (301)
|++.+|++++||+||+|+|+.++.+++.+..+|..+.++++++.+.+..++++.|++++|.. +...++ +.......
T Consensus 247 v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~ 326 (520)
T 1s3e_A 247 VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAY 326 (520)
T ss_dssp EEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSE
T ss_pred EEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCCCCCceeeccCCCCceEE
Confidence 88888888999999999999999887522112445667788888888999999999998853 222222 11111111
Q ss_pred hhhcccccccccCCC-CcEEEEEecC--CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecC---C--
Q 022185 156 YADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTP---R-- 227 (301)
Q Consensus 156 ~~~~s~~~~~~~~~g-~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~---~-- 227 (301)
..+. ..+++ ..++..++.. +..|.+++++++.+.+++.|+++||.... ..+......+|. +
T Consensus 327 ~~d~------~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~-----~~p~~~~~~~W~~~~~~~ 395 (520)
T 1s3e_A 327 TLDD------TKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEA-----LEPVHYEEKNWCEEQYSG 395 (520)
T ss_dssp EEEC------CCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGGG-----GCCSEEEEEEGGGCTTTC
T ss_pred EeeC------CCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCcccc-----CCccEEEEEeeCCCCCCC
Confidence 1111 12233 3555443332 35678889999999999999999986311 112223333333 2
Q ss_pred ccee--cCCCCC-CCCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhhcCC
Q 022185 228 SVYK--TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGK 291 (301)
Q Consensus 228 ~~~~--~~~g~~-~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~~~~~ 291 (301)
+.|. ..+|.. .+++...+|++||||||++++..++++++||+.||++||++|++.++...+.+.
T Consensus 396 G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~~~~~~~ 462 (520)
T 1s3e_A 396 GCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEI 462 (520)
T ss_dssp SSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTSSCGGGS
T ss_pred CCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 2222 233331 123446778999999999998777789999999999999999999876554433
No 4
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.92 E-value=2.9e-25 Score=207.00 Aligned_cols=263 Identities=11% Similarity=0.085 Sum_probs=177.2
Q ss_pred cCCCCccccHHHHHHHHHHHhhc----cCCceEeeecCCCcccchHHHHHHHHHcC-cEEEecceeeEEEecCCCcEEEE
Q 022185 6 NFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNF 80 (301)
Q Consensus 6 ~~~~~e~~sa~~~~~~~~~~~~~----~~~~~~~~~~GG~~~~l~~~l~~~l~~~g-~~I~l~~~V~~I~~~~~g~v~~V 80 (301)
+..+++++|+..++..+...... ......+++.||+ ++++++|.+.+++.| ++|+++++|++|+..++ .+. |
T Consensus 215 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-~v~-v 291 (495)
T 2vvm_A 215 SGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQ-SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-AAR-V 291 (495)
T ss_dssp HSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCH-HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-SEE-E
T ss_pred cCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCH-HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-EEE-E
Confidence 46789999998876554321000 0122456789996 999999999999888 99999999999998544 464 8
Q ss_pred EEeCCcEEecCEEEEccChhhHhhcC-CchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecCccchhhhhc
Q 022185 81 LLTNGNVIDGDAYVFATPVDILKLQL-PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADM 159 (301)
Q Consensus 81 ~~~~g~~~~ad~VI~a~p~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (301)
++.+|++++||+||+|+|++++.++. .+. +|..+.++++++.+.+..++++.|++++|.++.....++.++..++.
T Consensus 292 ~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~-lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~~~~g~~~~~~~~~~~~~-- 368 (495)
T 2vvm_A 292 TARDGREFVAKRVVCTIPLNVLSTIQFSPA-LSTERISAMQAGHVSMCTKVHAEVDNKDMRSWTGIAYPFNKLCYAIG-- 368 (495)
T ss_dssp EETTCCEEEEEEEEECCCGGGGGGSEEESC-CCHHHHHHHHHCCCCCCEEEEEEESCGGGGGEEEEECSSCSSCEEEE--
T ss_pred EECCCCEEEcCEEEECCCHHHHhheeeCCC-CCHHHHHHHHhcCCCceeEEEEEECCccCCCceeEecCCCCcEEEec--
Confidence 88888889999999999999998874 222 24456777888999899999999999887543322222223221111
Q ss_pred ccccccccCCCCcEEEEEecCCCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCC-----ccee-cC
Q 022185 160 SLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYK-TI 233 (301)
Q Consensus 160 s~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~ 233 (301)
....|.+..++.. +.+... .+++++..+.+++.|++++|+.. .+......+|.. +.|. +.
T Consensus 369 ----~~~~~~~~~vl~~-~~~~~~--~~~~~e~~~~~~~~L~~~~~~~~-------~~~~~~~~~W~~dp~~~g~y~~~~ 434 (495)
T 2vvm_A 369 ----DGTTPAGNTHLVC-FGNSAN--HIQPDEDVRETLKAVGQLAPGTF-------GVKRLVFHNWVKDEFAKGAWFFSR 434 (495)
T ss_dssp ----EEECTTSCEEEEE-EECSTT--CCCTTTCHHHHHHHHHTTSTTSC-------CEEEEEECCTTTCTTTSSSSCCCC
T ss_pred ----CCCCCCCCeEEEE-EeCccc--cCCCHHHHHHHHHHHHHhcCCCC-------CceEEEEeEcCCCCCCCCCccCcC
Confidence 1113444455544 333221 13455667889999999998632 234444445532 2232 23
Q ss_pred CCCC-CCCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhh
Q 022185 234 PNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 288 (301)
Q Consensus 234 ~g~~-~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~~ 288 (301)
||.. ..++....|.+||||||++++..++++|+||+.||++||++|++.++...+
T Consensus 435 ~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~~~ 490 (495)
T 2vvm_A 435 PGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGTKRE 490 (495)
T ss_dssp TTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred CCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhccccC
Confidence 3432 112234567899999999998767789999999999999999998765443
No 5
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.92 E-value=3e-23 Score=189.50 Aligned_cols=256 Identities=11% Similarity=0.133 Sum_probs=173.6
Q ss_pred cCCCCccccHHHHHHHHHHHhhccCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC
Q 022185 6 NFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG 85 (301)
Q Consensus 6 ~~~~~e~~sa~~~~~~~~~~~~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g 85 (301)
+..+++++|+..++..+..+... . ..++++||+ +.++++|++.++++|++|+++++|++|..+ ++++ |. .+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~--g~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v--V~-~~g 227 (421)
T 3nrn_A 156 DSVSLSDLTALELAKEIRAALRW-G--GPGLIRGGC-KAVIDELERIIMENKGKILTRKEVVEINIE-EKKV--YT-RDN 227 (421)
T ss_dssp HSSCGGGSBHHHHHHHHHHHHHH-C--SCEEETTCH-HHHHHHHHHHHHTTTCEEESSCCEEEEETT-TTEE--EE-TTC
T ss_pred cCCCcccCCHHHHHHHHHHHhhc-C--CcceecCCH-HHHHHHHHHHHHHCCCEEEcCCeEEEEEEE-CCEE--EE-eCC
Confidence 45788899998776666553211 1 357899995 999999999999999999999999999984 5545 54 477
Q ss_pred cEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecCccchhhhhccccccc
Q 022185 86 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKE 165 (301)
Q Consensus 86 ~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 165 (301)
++++||.||+|+|++.+.+|++....+.+..+++.++.+.+.+++++.++++.... .++++..+.-...+...|..++.
T Consensus 228 ~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~~i~~~s~~~p~ 306 (421)
T 3nrn_A 228 EEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG-NTIVFTPGLMINGFNEPSALDKS 306 (421)
T ss_dssp CEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC-SSEEECTTSSSCEEECGGGTCGG
T ss_pred cEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC-CeEEEcCCcceeeEeccCCCCCC
Confidence 78999999999999999998873212445667788899988899999999875432 34455332112112234556777
Q ss_pred ccCCCCcEEEEEecCCCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCC
Q 022185 166 YYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRS 245 (301)
Q Consensus 166 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 245 (301)
++|+|++++.+.+.- ...++++.++.++++|++++|.. +++..+.++.....|...++. .+. .+
T Consensus 307 ~ap~G~~~~~~~~~~----~~~~~~~~~~~~~~~L~~~~p~~--------~~~~~~~~~~~~p~~~~~~~~---~~~-~~ 370 (421)
T 3nrn_A 307 LAREGYTLIMAHMAL----KNGNVKKAIEKGWEELLEIFPEG--------EPLLAQVYRDGNPVNRTRAGL---HIE-WP 370 (421)
T ss_dssp GSCTTEEEEEEEEEC----TTCCHHHHHHHHHHHHHHHCTTC--------EEEEEEEC----------------CCC-CC
T ss_pred cCCCCceEEEEEEee----ccccHHHHHHHHHHHHHHHcCCC--------eEEEeeeccCCCCcccccCCC---CCC-CC
Confidence 788887766654421 12334466899999999999922 333333222222223222232 122 67
Q ss_pred CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhhc
Q 022185 246 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 289 (301)
Q Consensus 246 p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~~~ 289 (301)
+ +|||+|||++.+.++..++||+.||++||++| ..++-++|
T Consensus 371 ~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l--~~~~~~~~ 411 (421)
T 3nrn_A 371 L-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL--NLGSFSEW 411 (421)
T ss_dssp C-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT--TSCCCCTT
T ss_pred C-CcEEEECCcccCCCceeeehHHHHHHHHHHHh--CcCchhhh
Confidence 7 99999999998753235599999999999999 55555554
No 6
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.92 E-value=1.9e-24 Score=199.25 Aligned_cols=258 Identities=14% Similarity=0.124 Sum_probs=173.8
Q ss_pred cCCCCc-cccHHHHHHHHHHHh-----hccCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCc-EE
Q 022185 6 NFINPD-ELSMQCILIALNRFL-----QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT-VK 78 (301)
Q Consensus 6 ~~~~~e-~~sa~~~~~~~~~~~-----~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~-v~ 78 (301)
+..+++ ++|+.+++..+.... ....+....++.||+ ++|+++|++.+ |++|+++++|++|..+ ++. +.
T Consensus 173 ~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V~~i~~~-~~~~v~ 247 (453)
T 2yg5_A 173 MLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGM-QQVSIRMAEAL---GDDVFLNAPVRTVKWN-ESGATV 247 (453)
T ss_dssp CCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCT-HHHHHHHHHHH---GGGEECSCCEEEEEEE-TTEEEE
T ss_pred cccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCCh-HHHHHHHHHhc---CCcEEcCCceEEEEEe-CCceEE
Confidence 456888 999998765554310 001122357789996 99999999877 7899999999999985 444 43
Q ss_pred EEEEeCCcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCc--cceeeeec-Cccchh
Q 022185 79 NFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT--YDHLLFSR-SSLLSV 155 (301)
Q Consensus 79 ~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~-~~~~~~ 155 (301)
|++ +|++++||.||+|+|+.++.+++.+..+|..+.++++++.+.+..++++.|++++|.. +...++.. .++..+
T Consensus 248 -v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~ 325 (453)
T 2yg5_A 248 -LAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEV 325 (453)
T ss_dssp -EET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEE
T ss_pred -EEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCCCCCceeecCCCCeEEE
Confidence 666 7778999999999999999887522112445667788888888999999999988752 22222222 222111
Q ss_pred hhhcccccccccCCC-CcEEEEEecC--CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCC-----
Q 022185 156 YADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR----- 227 (301)
Q Consensus 156 ~~~~s~~~~~~~~~g-~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~----- 227 (301)
+ +. ..+++ ..++...+.. +..|.+++++++++.+++.|+++||... ..++.....+|..
T Consensus 326 ~-~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~------~~p~~~~~~~W~~~~~~~ 392 (453)
T 2yg5_A 326 Y-DN------TNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKA------EEPVVYYESDWGSEEWTR 392 (453)
T ss_dssp E-EC------CCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGG------GCCSEEEECCTTTCTTTC
T ss_pred E-eC------CCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccC------CCccEEEEeecCCCCCCC
Confidence 1 11 12333 3444433322 3457778899999999999999997521 1122333344432
Q ss_pred cce--ecCCCCC-CCCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 228 SVY--KTIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 228 ~~~--~~~~g~~-~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
+.| ...+|.. .+++...+|++||||||++++..++++++||+.||++||++|++.+
T Consensus 393 G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 393 GCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp SSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHh
Confidence 222 1234421 1233467789999999999987777899999999999999999865
No 7
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.90 E-value=1.1e-23 Score=195.17 Aligned_cols=235 Identities=17% Similarity=0.218 Sum_probs=162.8
Q ss_pred ecCCCcccchHHHHHHHHHc--------CcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCC-
Q 022185 37 LDGNPPERLCLPIVEHIQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP- 107 (301)
Q Consensus 37 ~~GG~~~~l~~~l~~~l~~~--------g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~- 107 (301)
++||+ ++|+++|++.+.+. |++|+++++|++|..+++ .+. |++.+|++++||+||+|+|+.++++++.
T Consensus 201 ~~gG~-~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~-~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~ 277 (472)
T 1b37_A 201 DQRGY-EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPG-GVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQ 277 (472)
T ss_dssp CTTCT-THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSS-CEE-EEETTSCEEEESEEEECSCHHHHHTTSSE
T ss_pred cCCcH-HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCC-cEE-EEECCCCEEEcCEEEEecCHHHhccCCee
Confidence 47996 99999999988654 689999999999999644 465 8888888899999999999999987531
Q ss_pred --chhhhcHHHHHHhhcCCcCeEEEEEEecccCCCc-c--ceeeeecCc--cchhhhhcccccccccCCCCcEEEEEecC
Q 022185 108 --ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-Y--DHLLFSRSS--LLSVYADMSLTCKEYYNPNQSMLELVFAP 180 (301)
Q Consensus 108 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~--~~~~~~~~~--~~~~~~~~s~~~~~~~~~g~~~l~~~~~~ 180 (301)
+. +|..+.++++++.+.+..++++.|++++|.. . ...++...+ ....+... .+ ..| +.+++.+.+.+
T Consensus 278 ~~p~-Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~p-~~~~l~~~~~~ 351 (472)
T 1b37_A 278 FKPK-LPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEF---EK-QYP-DANVLLVTVTD 351 (472)
T ss_dssp EESC-CCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEEC---TT-TST-TCCEEEEEEEH
T ss_pred ECCC-CCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecc---cC-CCC-CCCEEEEEech
Confidence 22 2445677788888888899999999998853 1 122232211 11111100 11 123 44565554432
Q ss_pred --CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeec---C--Cccee-cCCCCCC-CCCCCCCCCCCeE
Q 022185 181 --AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKT---P--RSVYK-TIPNCEP-CRPLQRSPVEGFY 251 (301)
Q Consensus 181 --~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~---~--~~~~~-~~~g~~~-~~~~~~~p~~~l~ 251 (301)
+..|..++++++.+.+++.|+++||+...+ .++...+.+| | .+.|. ..+|... .++...+|++|||
T Consensus 352 ~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~-----~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~ 426 (472)
T 1b37_A 352 EESRRIEQQSDEQTKAEIMQVLRKMFPGKDVP-----DATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVY 426 (472)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCC-----CCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEE
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCC-----CCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEE
Confidence 235677899999999999999999875311 1122223333 2 23343 2345431 2334567899999
Q ss_pred EeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 022185 252 LAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 285 (301)
Q Consensus 252 ~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~ 285 (301)
|||+++++.++++|+||+.||++||++|++.++.
T Consensus 427 fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 427 FTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp ECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccCCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 9999999877789999999999999999987643
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.90 E-value=1.9e-23 Score=193.85 Aligned_cols=236 Identities=15% Similarity=0.157 Sum_probs=158.0
Q ss_pred ceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE---eCCcEEecCEEEEccChhhHhhcCCc
Q 022185 32 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPE 108 (301)
Q Consensus 32 ~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~~~~ad~VI~a~p~~~l~~l~~~ 108 (301)
...++++||+ ++|+++|++.+ |++|+++++|++|..++++ + .|++ .+|++++||.||+|+|+..+.+|+++
T Consensus 228 ~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~-~-~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~ 301 (478)
T 2ivd_A 228 GALSTFDGGL-QVLIDALAASL---GDAAHVGARVEGLAREDGG-W-RLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP 301 (478)
T ss_dssp CCEEEETTCT-HHHHHHHHHHH---GGGEESSEEEEEEECC--C-C-EEEEEETTEEEEEECSEEEECSCHHHHHHHHTT
T ss_pred ccEEEECCCH-HHHHHHHHHHh---hhhEEcCCEEEEEEecCCe-E-EEEEeecCCCceEEcCEEEECCCHHHHHHHhhc
Confidence 4678899996 99999999988 6799999999999985444 5 4776 57778999999999999999888875
Q ss_pred hhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccc--eeeeec---CccchhhhhcccccccccCCCCcEEEEEecC--C
Q 022185 109 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD--HLLFSR---SSLLSVYADMSLTCKEYYNPNQSMLELVFAP--A 181 (301)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~---~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~--~ 181 (301)
. +..+.++++++.+.++.++++.+++++|.... ..+... .+...+..+ +...+...|++..++.+.+.. .
T Consensus 302 l--~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~p~g~~~l~~~~~~~~~ 378 (478)
T 2ivd_A 302 L--DDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHA-STTFPFRAEGGRVLYSCMVGGARQ 378 (478)
T ss_dssp T--CHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEH-HHHCGGGBSTTCEEEEEEEECTTC
T ss_pred c--CHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEE-cccCCCcCCCCCEEEEEEeCCcCC
Confidence 3 44566778889998999999999988764211 112211 111111111 111233345565666555433 2
Q ss_pred CccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCC----CCCCCCCCCCCeEEeeccc
Q 022185 182 EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYT 257 (301)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~p~~~l~~aGd~~ 257 (301)
..|.+.+++++.+.+++.|++++|.... +......+|+.+.+.+.++... .++.... .+||||||+++
T Consensus 379 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~ 450 (478)
T 2ivd_A 379 PGLVEQDEDALAALAREELKALAGVTAR-------PSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAY 450 (478)
T ss_dssp GGGGGSCHHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTT
T ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCCC-------CcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCC
Confidence 3456778999999999999999986431 2233455666654334444311 1111112 57999999998
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHhhhhh
Q 022185 258 KQKYLASMEGAVLSGKLCAQAIVQDYVLLA 287 (301)
Q Consensus 258 ~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~ 287 (301)
. + .+++||+.||+++|++|++.++..+
T Consensus 451 ~-g--~gv~gA~~SG~~aA~~i~~~l~~~~ 477 (478)
T 2ivd_A 451 K-G--VGLNDCIRNAAQLADALVAGNTSHA 477 (478)
T ss_dssp S-C--CSHHHHHHHHHHHHHHHCC------
T ss_pred C-C--CCHHHHHHHHHHHHHHHHHhhccCC
Confidence 4 3 5799999999999999988776544
No 9
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.90 E-value=9e-24 Score=195.18 Aligned_cols=232 Identities=16% Similarity=0.189 Sum_probs=163.1
Q ss_pred ceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCchhh
Q 022185 32 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWK 111 (301)
Q Consensus 32 ~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~ 111 (301)
..+.+++||+ +.|+++|++.+++ ++|+++++|++|+.++++ +. |++.+|++++||.||+|+|++++.+++++.
T Consensus 225 ~~~~~~~~g~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~~-v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~-- 297 (470)
T 3i6d_A 225 GQFQTLSTGL-QTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC-YS-LELDNGVTLDADSVIVTAPHKAAAGMLSEL-- 297 (470)
T ss_dssp --EEEETTCT-HHHHHHHHHTCCS--EEEECSCCEEEEEECSSS-EE-EEESSSCEEEESEEEECSCHHHHHHHTTTS--
T ss_pred ceEEEeCChH-HHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe-EE-EEECCCCEEECCEEEECCCHHHHHHHcCCc--
Confidence 3567889996 9999999998743 799999999999986444 64 888889889999999999999999987652
Q ss_pred hcHHHHHHhhcCCcCeEEEEEEecccCCCc-cc--eeeeecC-cc--chhhhhcccccccccCCCCcEEEEEecC--CCc
Q 022185 112 EMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YD--HLLFSRS-SL--LSVYADMSLTCKEYYNPNQSMLELVFAP--AEE 183 (301)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~--~~~~~~~-~~--~~~~~~~s~~~~~~~~~g~~~l~~~~~~--~~~ 183 (301)
+..++++++.+.++.++++.|++++|.. .. ..++... +. .++. ..|..++...|++..++.+++.. +..
T Consensus 298 --~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~-~~s~~~~~~~p~~~~~l~~~~~~~~~~~ 374 (470)
T 3i6d_A 298 --PAISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACT-WTNKKWPHAAPEGKTLLRAYVGKAGDES 374 (470)
T ss_dssp --TTHHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEE-EHHHHCGGGSCTTCEEEEEEECCSSCCG
T ss_pred --hhhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEE-EEcCcCCCcCCCCCEEEEEEECCCCCcc
Confidence 2345678888989999999999988742 11 2333322 21 1111 11112334456665666655533 234
Q ss_pred cCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCC----CCCCCCCCCCCeEEeeccccC
Q 022185 184 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQ 259 (301)
Q Consensus 184 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~p~~~l~~aGd~~~~ 259 (301)
+..++++++.+.++++|+++||... .+....+.+|+++.+.+.+|... .++...++.+|||+|||++..
T Consensus 375 ~~~~~~~~~~~~~~~~l~~~~g~~~-------~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g 447 (470)
T 3i6d_A 375 IVDLSDNDIINIVLEDLKKVMNING-------EPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEG 447 (470)
T ss_dssp GGTSCHHHHHHHHHHHHGGGSCCCS-------CCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC
T ss_pred ccCCCHHHHHHHHHHHHHHHhCCCC-------CceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC
Confidence 6688999999999999999998642 22334455666665555555421 122233456899999998864
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHh
Q 022185 260 KYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 260 ~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
.++++|+.||+++|++|++.+
T Consensus 448 ---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 448 ---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHHHh
Confidence 579999999999999999865
No 10
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.89 E-value=2.1e-22 Score=193.61 Aligned_cols=232 Identities=20% Similarity=0.270 Sum_probs=154.0
Q ss_pred eEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC------CcEEecCEEEEccChhhHhhc-
Q 022185 33 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQ- 105 (301)
Q Consensus 33 ~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~------g~~~~ad~VI~a~p~~~l~~l- 105 (301)
....+.||+ ++|+++|++ +.+|++|++|++|.+++++ |. |++.+ |++++||+||+|+|+.+++++
T Consensus 392 ~~~~~~gG~-~~l~~~La~-----~l~I~l~~~V~~I~~~~~~-v~-V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~ 463 (662)
T 2z3y_A 392 SHLTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTASG-CE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 463 (662)
T ss_dssp CCEEETTCT-THHHHHHTT-----TCEEETTEEEEEEEEETTE-EE-EEEEESSCTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceeeecCcH-HHHHHHHHh-----cCceecCCeEEEEEECCCc-EE-EEEeecccCCCCeEEEeCEEEECCCHHHHhccc
Confidence 346678997 999888875 5689999999999997554 53 77655 567999999999999999873
Q ss_pred -----CCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeec--CccchhhhhcccccccccCCCCcEEEEEe
Q 022185 106 -----LPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSR--SSLLSVYADMSLTCKEYYNPNQSMLELVF 178 (301)
Q Consensus 106 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~g~~~l~~~~ 178 (301)
.|+ +|..+.++++++.|.++.|+++.|++++|... ...+.. ...... ......++.. +..++..++
T Consensus 464 ~~i~f~P~--LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~-~~~~G~l~~~~~~~-~~~~~~~~~~---~~~vL~~~~ 536 (662)
T 2z3y_A 464 PAVQFVPP--LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPS-VNLFGHVGSTTASR-GELFLFWNLY---KAPILLALV 536 (662)
T ss_dssp CSSEEESC--CCHHHHHHHHHSEECCCEEEEEECSSCCSCTT-CSEEEECCSSSTTT-TEEEEEECCS---SSSEEEEEE
T ss_pred CceEEcCC--CCHHHHHHHHhCCccceeEEEEEcCcccccCC-CCceeeecCCCCCC-CceeEEEeCC---CCCEEEEEe
Confidence 243 24456778899999999999999999998631 111210 000000 0000011111 234554444
Q ss_pred cC--CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCC-----cceec-CCCCCC------------
Q 022185 179 AP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYKT-IPNCEP------------ 238 (301)
Q Consensus 179 ~~--~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~g~~~------------ 238 (301)
.+ +..+..++++++++.+++.|+++|+....+ .+....+.+|.. +.|.+ .||...
T Consensus 537 ~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~-----~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~ 611 (662)
T 2z3y_A 537 AGEAAGIMENISDDVIVGRCLAILKGIFGSSAVP-----QPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITP 611 (662)
T ss_dssp CTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSC-----CCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC
T ss_pred ccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccC-----CCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcc
Confidence 33 345678899999999999999999763211 122233344433 24432 445321
Q ss_pred --CCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 022185 239 --CRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 239 --~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
.+|....+.++|||||++++..|+++|+||+.||.+||++|++.++
T Consensus 612 ~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 612 GPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp ---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 0112234568999999999987789999999999999999998764
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.89 E-value=9.9e-23 Score=189.57 Aligned_cols=235 Identities=14% Similarity=0.143 Sum_probs=158.3
Q ss_pred CceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC---cEEecCEEEEccChhhHhhcCC
Q 022185 31 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQLP 107 (301)
Q Consensus 31 ~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g---~~~~ad~VI~a~p~~~l~~l~~ 107 (301)
...+++++||+ ++|+++|++.|.+ ++|+++++|++|+.++ +.|. |++.+| ++++||+||+|+|+.++.++..
T Consensus 228 ~~~~~~~~gG~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~ 302 (489)
T 2jae_A 228 AMMMFTPVGGM-DRIYYAFQDRIGT--DNIVFGAEVTSMKNVS-EGVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQN 302 (489)
T ss_dssp SSSEEEETTCT-THHHHHHHHHHCG--GGEETTCEEEEEEEET-TEEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEE
T ss_pred CccEEeecCCH-HHHHHHHHHhcCC--CeEEECCEEEEEEEcC-CeEE-EEEecCCeEEEEECCEEEECCCHHHHHhCcc
Confidence 34678899996 9999999998832 7899999999999864 4464 777766 6799999999999999988765
Q ss_pred chhhhcHHHHHHhhcCCcCeEEEEEEecccCCCc----cceeeeecCccchhhhhcccccccccCCCCcEEEEEe-cC--
Q 022185 108 ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT----YDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVF-AP-- 180 (301)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~-~~-- 180 (301)
+ +|..+.++++++.|.++.++++.|++++|.. ++...+.+.+...++ ..|... +...+++...+ ..
T Consensus 303 ~--l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~-~~s~~~----~~~~~~l~~~~~~g~~ 375 (489)
T 2jae_A 303 N--LPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIM-FPYDHY----NSDRGVVVAYYSSGKR 375 (489)
T ss_dssp C--CCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEE-CCSSST----TSSCEEEEEEEEETHH
T ss_pred C--CCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEE-eCCCCC----CCCCCEEEEEeeCCch
Confidence 3 2445677788999999999999999988742 112223333332222 111111 11123443223 22
Q ss_pred CCccCCCChHHHHHHHHHHHHHhCCC-CccccccCceEEEEEEeecCCcc-----ee-cC------CCCC-CCCCCCCCC
Q 022185 181 AEEWISCSDSEIIDATMKELAKLFPD-EISADQSKAKIVKYHVVKTPRSV-----YK-TI------PNCE-PCRPLQRSP 246 (301)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~l~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~------~g~~-~~~~~~~~p 246 (301)
+..|..++++++.+.+++.|++++|. +.. .+......+|.... |. .. |+.. ..++...+|
T Consensus 376 ~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~------~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~ 449 (489)
T 2jae_A 376 QEAFESLTHRQRLAKAIAEGSEIHGEKYTR------DISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEP 449 (489)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHCGGGGS------SEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSC
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHcCcchhh------hccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCC
Confidence 24577889999999999999999987 431 22222333333222 21 11 3321 112234567
Q ss_pred CCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 022185 247 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 247 ~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
.+||||||++++. +.++++||+.||+++|++|++.+.
T Consensus 450 ~~~l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 450 VDKIYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp BTTEEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999974 447999999999999999998764
No 12
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.89 E-value=1.2e-22 Score=188.27 Aligned_cols=261 Identities=16% Similarity=0.132 Sum_probs=177.3
Q ss_pred ccCCCCccccHHHHHHHHHHH-----------hh----------------ccCCceEeeecCCCcccchHHHHHHHHHcC
Q 022185 5 LNFINPDELSMQCILIALNRF-----------LQ----------------EKHGSKMAFLDGNPPERLCLPIVEHIQSLG 57 (301)
Q Consensus 5 ~~~~~~e~~sa~~~~~~~~~~-----------~~----------------~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g 57 (301)
.+..+++++|+..++..+... +. ...+..+++++||+ ++|+++|++.|+++|
T Consensus 170 ~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g 248 (477)
T 3nks_A 170 VFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGL-EMLPQALETHLTSRG 248 (477)
T ss_dssp HHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCT-THHHHHHHHHHHHTT
T ss_pred cccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCH-HHHHHHHHHHHHhcC
Confidence 457789999998775443321 00 01133578899996 999999999999999
Q ss_pred cEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEeccc
Q 022185 58 GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRK 137 (301)
Q Consensus 58 ~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 137 (301)
++|+++++|++|+.++++.+ .|++ +|++++||.||+|+|++.+.+|+++. +.+..+++.++.+.++.++++.|+++
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~-~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~--~~~~~~~l~~~~~~~~~~v~l~~~~~ 324 (477)
T 3nks_A 249 VSVLRGQPVCGLSLQAEGRW-KVSL-RDSSLEADHVISAIPASVLSELLPAE--AAPLARALSAITAVSVAVVNLQYQGA 324 (477)
T ss_dssp CEEECSCCCCEEEECGGGCE-EEEC-SSCEEEESEEEECSCHHHHHHHSCGG--GHHHHHHHHTCCEEEEEEEEEEETTC
T ss_pred CEEEeCCEEEEEEEcCCceE-EEEE-CCeEEEcCEEEECCCHHHHHHhcccc--CHHHHHHHhcCCCCcEEEEEEEECCC
Confidence 99999999999998544424 4766 55579999999999999999998764 23456678888998999999999988
Q ss_pred CCC--ccceeeeec---Cccchhhhhccccccccc-CCCCcEEEEEecCC--Ccc----CCCChHHHHHHHHHHHHHhCC
Q 022185 138 LKN--TYDHLLFSR---SSLLSVYADMSLTCKEYY-NPNQSMLELVFAPA--EEW----ISCSDSEIIDATMKELAKLFP 205 (301)
Q Consensus 138 ~~~--~~~~~~~~~---~~~~~~~~~~s~~~~~~~-~~g~~~l~~~~~~~--~~~----~~~~~~~~~~~~~~~l~~~~p 205 (301)
+|. ++ ..+... .+..++..+.+ .++.+. +++..++.+++... ..+ ..++++++++.++++|+++++
T Consensus 325 ~~~~~~~-g~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g 402 (477)
T 3nks_A 325 HLPVQGF-GHLVPSSEDPGVLGIVYDSV-AFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLG 402 (477)
T ss_dssp CCSSCSS-EEECCTTTCSSEEEEECHHH-HCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCc-eEEccCCCCCCceEEEEecc-ccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhC
Confidence 774 33 222221 12222221221 223222 33556665555321 111 246899999999999999996
Q ss_pred CCccccccCceEEEEEEeecCCcceecCCCCCCCC----CCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 206 DEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR----PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
... .+....+.+|+++.+.+.+|+.... .......++|++||||+.. .++++|+.||+.+|++|+.
T Consensus 403 ~~~-------~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G---~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 403 LKE-------MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEG---VAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp CCS-------CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSC---CSHHHHHHHHHHHHHHHHH
T ss_pred CCC-------CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCC---CcHHHHHHHHHHHHHHHHh
Confidence 532 2234556677777666566643210 0111123589999999753 5899999999999999987
Q ss_pred H
Q 022185 282 D 282 (301)
Q Consensus 282 ~ 282 (301)
+
T Consensus 473 ~ 473 (477)
T 3nks_A 473 T 473 (477)
T ss_dssp C
T ss_pred c
Confidence 4
No 13
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.88 E-value=1.4e-21 Score=173.64 Aligned_cols=228 Identities=14% Similarity=0.117 Sum_probs=157.6
Q ss_pred EeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCch--hh
Q 022185 34 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN--WK 111 (301)
Q Consensus 34 ~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~--~~ 111 (301)
.+...+|+ ++++++|.+.+ |++|+++++|++|+.++++ +. |++.+|++++||.||+|+|++.+.+|+++. .+
T Consensus 104 ~~~~~~g~-~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~-~~-v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 104 NFVAPQGI-SSIIKHYLKES---GAEVYFRHRVTQINLRDDK-WE-VSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp EEECTTCT-THHHHHHHHHH---TCEEESSCCEEEEEECSSS-EE-EEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred ceecCCCH-HHHHHHHHHhc---CCEEEeCCEEEEEEEcCCE-EE-EEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 34457896 89999999876 8999999999999996444 64 888788778999999999999999998642 12
Q ss_pred hcHHHHHHhhcCCcCeEEEEEEecccCCC--ccceeeeecCc-cchhhhhccccccccc-CCCCcEEEEEecC--CCccC
Q 022185 112 EMAYFKRLEKLVGVPVINIHIWFDRKLKN--TYDHLLFSRSS-LLSVYADMSLTCKEYY-NPNQSMLELVFAP--AEEWI 185 (301)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~-~~~~~~~~s~~~~~~~-~~g~~~l~~~~~~--~~~~~ 185 (301)
|....+.+.++.|.++.++++.|++++|. ++...+..+.+ +..++.+.+. +... +++...+.+...+ ++.+.
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k--~~r~~~~~~~~~v~~~~~~~~~~~~ 255 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKK--RNIESSEIGPSLVIHTTVPFGVTYL 255 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHH--TTCCCC-CCCEEEEEECHHHHHHTT
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccC--CCCCCCCCCceEEEECCHHHHHHhh
Confidence 33556778999999999999999987543 33343333333 2222222221 1111 1222333333322 24467
Q ss_pred CCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCC--CCCCCeEEeeccccCCCCC
Q 022185 186 SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQR--SPVEGFYLAGDYTKQKYLA 263 (301)
Q Consensus 186 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~p~~~l~~aGd~~~~~~~~ 263 (301)
+++++++.+.++++|++++|... .+....+.+|.++.+.+... .++... ...++|++||||+.. +
T Consensus 256 ~~~~~~~~~~~~~~l~~~~g~~~-------~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g---~ 322 (342)
T 3qj4_A 256 EHSIEDVQELVFQQLENILPGLP-------QPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ---S 322 (342)
T ss_dssp TSCHHHHHHHHHHHHHHHSCSCC-------CCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC---S
T ss_pred cCCHHHHHHHHHHHHHHhccCCC-------CCceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC---C
Confidence 88999999999999999998543 23455677888776532111 122222 356899999999975 6
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 022185 264 SMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 264 ~v~gA~~SG~~aA~~i~~~ 282 (301)
++++|+.||+.+|++|++.
T Consensus 323 ~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 323 NFDGCITSALCVLEALKNY 341 (342)
T ss_dssp SHHHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHHHHhh
Confidence 9999999999999999764
No 14
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.88 E-value=5.9e-22 Score=193.62 Aligned_cols=237 Identities=19% Similarity=0.246 Sum_probs=157.5
Q ss_pred eEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC------CcEEecCEEEEccChhhHhhc-
Q 022185 33 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQ- 105 (301)
Q Consensus 33 ~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~------g~~~~ad~VI~a~p~~~l~~l- 105 (301)
....++||+ ++|+++|++ +.+|++|++|++|.+++++ |. |++.+ |++++||+||+|+|+.+++++
T Consensus 563 ~~~~~~gG~-~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~g-V~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~ 634 (852)
T 2xag_A 563 SHLTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTASG-CE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 634 (852)
T ss_dssp CCEEETTCT-THHHHHHTT-----TCCEECSEEEEEEEEETTE-EE-EEEEESSSTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceEEecCcH-HHHHHHHHh-----CCCEEeCCeEEEEEEcCCc-EE-EEEeecccCCCCeEEECCEEEECCCHHHHHhhh
Confidence 346678997 999888876 4589999999999996554 53 76655 568999999999999999874
Q ss_pred -----CCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecC-ccchhhhhcccccccccCCCCcEEEEEec
Q 022185 106 -----LPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRS-SLLSVYADMSLTCKEYYNPNQSMLELVFA 179 (301)
Q Consensus 106 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~g~~~l~~~~~ 179 (301)
.|+ +|..+.++++++.|.++.|++|.|++++|... ..+|... +...........++.. +..++..++.
T Consensus 635 ~~I~F~P~--LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~-~~~fG~l~~~~~~~~~l~~~~~~~---~~pvLl~~v~ 708 (852)
T 2xag_A 635 PAVQFVPP--LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPS-VNLFGHVGSTTASRGELFLFWNLY---KAPILLALVA 708 (852)
T ss_dssp CSSEEESC--CCHHHHHHHHHSEECCCEEEEEECSSCCSCTT-CCEEEECCSSSTTTTTTCEEEECS---SSSEEEEEEC
T ss_pred cccccCCC--CCHHHHHHHHcCCccceEEEEEEcCCcccCCC-CCeeeeeccccCCCCceEEEecCC---CCCEEEEEec
Confidence 233 24456777899999999999999999998631 1122110 0000000000011111 2235544333
Q ss_pred C--CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCC-----cceec-CCCCCC------C------
Q 022185 180 P--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYKT-IPNCEP------C------ 239 (301)
Q Consensus 180 ~--~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~g~~~------~------ 239 (301)
+ +..+..++++++++.+++.|+++|+....+ .+....+.+|.. +.|.+ .+|... .
T Consensus 709 G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~-----~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~ 783 (852)
T 2xag_A 709 GEAAGIMENISDDVIVGRCLAILKGIFGSSAVP-----QPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPG 783 (852)
T ss_dssp HHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCC-----CCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCC
T ss_pred CcCHHHHhcCCHHHHHHHHHHHHHHHhCccccC-----CceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccc
Confidence 2 345678899999999999999999763211 122333444433 24432 455421 0
Q ss_pred --CCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhh
Q 022185 240 --RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 288 (301)
Q Consensus 240 --~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~~ 288 (301)
+|....+.++|||||++++..|+++|+||+.||.+||++|++.+.....
T Consensus 784 ~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~~ 834 (852)
T 2xag_A 784 PSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMY 834 (852)
T ss_dssp CSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCGG
T ss_pred cccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 1122345689999999999877899999999999999999998865433
No 15
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.87 E-value=6.4e-23 Score=190.11 Aligned_cols=234 Identities=15% Similarity=0.197 Sum_probs=160.4
Q ss_pred CceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCchh
Q 022185 31 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 110 (301)
Q Consensus 31 ~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~ 110 (301)
+..+.+++||+ ++|+++|++.+++ ++|+++++|++|+..++ .+. |++.+| +++||+||+|+|++++.+++++.
T Consensus 225 ~~~~~~~~~G~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~-~~~-v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~- 297 (475)
T 3lov_A 225 TGQFLSLETGL-ESLIERLEEVLER--SEIRLETPLLAISREDG-RYR-LKTDHG-PEYADYVLLTIPHPQVVQLLPDA- 297 (475)
T ss_dssp CCSEEEETTCH-HHHHHHHHHHCSS--CEEESSCCCCEEEEETT-EEE-EECTTC-CEEESEEEECSCHHHHHHHCTTS-
T ss_pred CCcEEeeCChH-HHHHHHHHhhccC--CEEEcCCeeeEEEEeCC-EEE-EEECCC-eEECCEEEECCCHHHHHHHcCcc-
Confidence 34678899996 9999999998843 79999999999998544 454 888788 79999999999999999988653
Q ss_pred hhcHHHHHHhhcCCcCeEEEEEEecccCCCccc--eeeeecC-cc--chhhhhcccccccccCCCCcEEEEEecC--CCc
Q 022185 111 KEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD--HLLFSRS-SL--LSVYADMSLTCKEYYNPNQSMLELVFAP--AEE 183 (301)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~-~~--~~~~~~~s~~~~~~~~~g~~~l~~~~~~--~~~ 183 (301)
+. +.+.++.+.++.++++.|+++++.+.. .+++... +. .++. ..+..++...|+ ..++.+++.. ...
T Consensus 298 -~~---~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~-~~s~~~~~~~p~-~~~l~~~~~~~~~~~ 371 (475)
T 3lov_A 298 -HL---PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACT-AIDQKWNHSAPD-HTVLRAFVGRPGNDH 371 (475)
T ss_dssp -CC---HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEE-EHHHHCTTTCTT-EEEEEEEECBTTBCG
T ss_pred -CH---HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEE-EEcccCCCCCCC-cEEEEEEeCCCCCCc
Confidence 22 567788998999999999988743222 2333322 21 1111 111122333343 3445554432 244
Q ss_pred cCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCC----CCCCCCCCCCCeEEeeccccC
Q 022185 184 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQ 259 (301)
Q Consensus 184 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~p~~~l~~aGd~~~~ 259 (301)
+..++++++.+.++++|+++||... .+....+.+|+++.+.+.+|+.. .++...++.+|||||||++..
T Consensus 372 ~~~~~~e~~~~~~~~~L~~~~g~~~-------~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g 444 (475)
T 3lov_A 372 LVHESDEVLQQAVLQDLEKICGRTL-------EPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG 444 (475)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHSSCC-------CCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC
T ss_pred ccCCCHHHHHHHHHHHHHHHhCCCC-------CCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC
Confidence 6678999999999999999997532 22334455666655445555421 122233456899999998864
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhhhhh
Q 022185 260 KYLASMEGAVLSGKLCAQAIVQDYVLLA 287 (301)
Q Consensus 260 ~~~~~v~gA~~SG~~aA~~i~~~~~~~~ 287 (301)
.++++|+.||+++|++|++.++...
T Consensus 445 ---~g~~~a~~sG~~aA~~i~~~l~~~~ 469 (475)
T 3lov_A 445 ---VGLPDCVASAKTMIESIELEQSHTD 469 (475)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHTC----
T ss_pred ---CCHHHHHHHHHHHHHHHHHHhhccc
Confidence 5799999999999999999876553
No 16
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.87 E-value=5.1e-23 Score=192.15 Aligned_cols=235 Identities=16% Similarity=0.131 Sum_probs=153.8
Q ss_pred eEeeecCCCcccchHHHHHHHHHcC-cEEEecceeeEEEecCCCc----EEEEEEe--CC---cEEecCEEEEccChhhH
Q 022185 33 KMAFLDGNPPERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGT----VKNFLLT--NG---NVIDGDAYVFATPVDIL 102 (301)
Q Consensus 33 ~~~~~~GG~~~~l~~~l~~~l~~~g-~~I~l~~~V~~I~~~~~g~----v~~V~~~--~g---~~~~ad~VI~a~p~~~l 102 (301)
..++++||+ ++|+++|++.| + ++|+++++|++|..++++. ...|++. +| ++++||.||+|+|++.+
T Consensus 234 ~~~~~~GG~-~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l 309 (504)
T 1sez_A 234 GSFSFLGGM-QTLTDAICKDL---REDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDV 309 (504)
T ss_dssp SCBEETTCT-HHHHHHHHTTS---CTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHH
T ss_pred ceEeeCcHH-HHHHHHHHhhc---ccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHH
Confidence 467789996 99999999876 4 7999999999999865542 1236654 45 57899999999999999
Q ss_pred hhcCC----chhhhcHHHHHHhhcCCcCeEEEEEEecccCCCc-c-c-eeeeecC------ccchhhhhcccccccccCC
Q 022185 103 KLQLP----ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-Y-D-HLLFSRS------SLLSVYADMSLTCKEYYNP 169 (301)
Q Consensus 103 ~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-~-~~~~~~~------~~~~~~~~~s~~~~~~~~~ 169 (301)
.+++. ..+ +.+. +.++.+.++.++++.|++++|.. . . ++++... .+.++. ..|..++...|+
T Consensus 310 ~~ll~~~~~~~~-~~~~---l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~-~~s~~~~~~~p~ 384 (504)
T 1sez_A 310 KSMKIAKRGNPF-LLNF---IPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTL-FSSMMFPDRAPN 384 (504)
T ss_dssp HTSEEESSSSBC-CCTT---SCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEE-EHHHHCGGGSCT
T ss_pred HHHhhcccCCcc-cHHH---HhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEE-eeccccCCcCCC
Confidence 98873 111 1111 55677778899999999887641 1 1 2222211 111111 011234444566
Q ss_pred CCcEEEEEecC--CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCC---CCCC
Q 022185 170 NQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR---PLQR 244 (301)
Q Consensus 170 g~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~ 244 (301)
+..++..+... +..|..++++++++.++++|++++|.... +....+.+|+.+.+.+.+|+.... +...
T Consensus 385 g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~-------p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~ 457 (504)
T 1sez_A 385 NVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGE-------PTYVNHLYWSKAFPLYGHNYDSVLDAIDKME 457 (504)
T ss_dssp TEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSC-------CSSEEEEEEEEEEECCCTTHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCC-------CeEEEEeECCCCCCccCcCHHHHHHHHHHHH
Confidence 65555443322 24577889999999999999999976321 112223344444333344432111 1123
Q ss_pred CCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhh
Q 022185 245 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 286 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~ 286 (301)
+|++||||||++++. .++++|+.||++||++|++.++..
T Consensus 458 ~~~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 458 KNLPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp HHSTTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence 467899999999873 589999999999999999987654
No 17
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.86 E-value=1.3e-21 Score=182.46 Aligned_cols=238 Identities=14% Similarity=0.085 Sum_probs=158.7
Q ss_pred ceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCc----EEecCEEEEccChhhHhhcC-
Q 022185 32 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQL- 106 (301)
Q Consensus 32 ~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~----~~~ad~VI~a~p~~~l~~l~- 106 (301)
..+.++.||+ ++|+++|++.|++ +|+++++|++|+.+++ .|. |++.+|+ +++||+||+|+|+..+.++.
T Consensus 231 ~~~~~~~gG~-~~l~~~l~~~l~~---~i~~~~~V~~I~~~~~-~v~-v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f 304 (498)
T 2iid_A 231 KRFDEIVDGM-DKLPTAMYRDIQD---KVHFNAQVIKIQQNDQ-KVT-VVYETLSKETPSVTADYVIVCTTSRAVRLIKF 304 (498)
T ss_dssp CCEEEETTCT-THHHHHHHHHTGG---GEESSCEEEEEEECSS-CEE-EEEECSSSCCCEEEESEEEECSCHHHHTTSEE
T ss_pred cceEEeCCcH-HHHHHHHHHhccc---ccccCCEEEEEEECCC-eEE-EEEecCCcccceEEeCEEEECCChHHHhheec
Confidence 3567889996 9999999998843 8999999999999544 463 7776664 47999999999999888763
Q ss_pred -CchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCcc---ceeeeecCccchhhhhcccccccccCCCCcEEEEEecC--
Q 022185 107 -PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY---DHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP-- 180 (301)
Q Consensus 107 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~-- 180 (301)
|+ +|..+.++++++.|.+..++++.|++++|... +...+.+.+...++ ..+ ...|.+.+++..+..+
T Consensus 305 ~p~--Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~s----~~~p~g~~~L~~~~~g~~ 377 (498)
T 2iid_A 305 NPP--LLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIY-YPN----HNFTNGVGVIIAYGIGDD 377 (498)
T ss_dssp ESC--CCHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEE-CCS----SCCTTSCEEEEEEEEHHH
T ss_pred CCC--CCHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCCCCcceEE-ECC----CCCCCCCcEEEEEeCCcc
Confidence 44 25567778899999999999999999988531 12222222221111 111 1134455555543322
Q ss_pred CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeec---CCc--cee-cCCCCC-CCCCCCCCCCCCeEEe
Q 022185 181 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKT---PRS--VYK-TIPNCE-PCRPLQRSPVEGFYLA 253 (301)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~---~~~--~~~-~~~g~~-~~~~~~~~p~~~l~~a 253 (301)
+..|..++++++.+.++++|+++++... ++... ........+| |++ .|. ..|+.. .+++....|.+|||||
T Consensus 378 a~~~~~~~~~~~~~~~l~~L~~~~g~~~-~~~~~-~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fA 455 (498)
T 2iid_A 378 ANFFQALDFKDCADIVFNDLSLIHQLPK-KDIQS-FCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFA 455 (498)
T ss_dssp HHTTTTSCHHHHHHHHHHHHHHHHTCCH-HHHHH-HEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEEC
T ss_pred HhhhhcCCHHHHHHHHHHHHHHHcCCCh-hhhhh-hcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEE
Confidence 3457788999999999999999997321 10000 0111222333 332 222 122221 1122234578999999
Q ss_pred eccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 022185 254 GDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 285 (301)
Q Consensus 254 Gd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~ 285 (301)
|++++..+ ++++||+.||+++|++|++.++.
T Consensus 456 Ge~t~~~~-g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 456 GEYTAQAH-GWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp SGGGSSSS-SCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EcccccCC-cCHHHHHHHHHHHHHHHHHHhcC
Confidence 99997654 79999999999999999998864
No 18
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.86 E-value=4e-21 Score=186.56 Aligned_cols=228 Identities=21% Similarity=0.290 Sum_probs=153.1
Q ss_pred ceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhc----CC
Q 022185 32 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ----LP 107 (301)
Q Consensus 32 ~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l----~~ 107 (301)
.....+.+|+ +.++++|++ |++|+++++|++|+.++++ |. |++.+|++++||.||+|+|+.++++. .|
T Consensus 524 G~~~~~~~G~-~~l~~aLa~-----gl~I~l~t~V~~I~~~~~~-v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P 595 (776)
T 4gut_A 524 GDHTLLTPGY-SVIIEKLAE-----GLDIQLKSPVQCIDYSGDE-VQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNP 595 (776)
T ss_dssp SCEEECTTCT-HHHHHHHHT-----TSCEESSCCEEEEECSSSS-EE-EEETTCCEEEESEEEECCCHHHHHTTCSEEES
T ss_pred CCeEEECChH-HHHHHHHHh-----CCcEEcCCeeEEEEEcCCE-EE-EEECCCcEEEcCEEEECCCHHHHhhcccccCC
Confidence 3556678886 878777763 7899999999999986444 64 88888888999999999999999752 23
Q ss_pred chhhhcHHHHHHhhcCCcCeEEEEEEecccCCCcc--ceeeeec-------CccchhhhhcccccccccCCCC-cEEEEE
Q 022185 108 ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY--DHLLFSR-------SSLLSVYADMSLTCKEYYNPNQ-SMLELV 177 (301)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~-------~~~~~~~~~~s~~~~~~~~~g~-~~l~~~ 177 (301)
++ |..+.++++++.+.++.++++.|++++|... +..++.. ..+..++.+ ..+.+. .++..+
T Consensus 596 ~L--p~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d-------~~p~g~~~vL~~~ 666 (776)
T 4gut_A 596 PL--SEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYD-------MDPQKKHSVLMSV 666 (776)
T ss_dssp CC--CHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEE-------SCTTSCSCEEEEE
T ss_pred CC--CHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEec-------CCCCCCceEEEEE
Confidence 32 4466778888998889999999999998521 1112211 011111111 123332 455444
Q ss_pred ecC--CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeec---CC--cceec-CCCCCC-CCCCCCCCC-
Q 022185 178 FAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKT---PR--SVYKT-IPNCEP-CRPLQRSPV- 247 (301)
Q Consensus 178 ~~~--~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~---~~--~~~~~-~~g~~~-~~~~~~~p~- 247 (301)
+.+ +..+..++++++++.+++.|+++||....+ .+....+.+| |+ +.|.. .+|... ..+.+..|+
T Consensus 667 i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~-----~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~ 741 (776)
T 4gut_A 667 IAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVP-----DPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQ 741 (776)
T ss_dssp ECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCC-----CCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBT
T ss_pred ecchhHHHHHcCCHHHHHHHHHHHHHHHhCccccc-----CcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCC
Confidence 433 245678899999999999999999863211 1222223333 22 33432 344321 111223343
Q ss_pred CCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 248 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
++|||||++++..++++|+||++||.++|++|++
T Consensus 742 grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 742 GTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp TTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 7899999999988889999999999999999974
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.83 E-value=6.9e-20 Score=167.53 Aligned_cols=246 Identities=13% Similarity=0.124 Sum_probs=158.0
Q ss_pred cCCCCccccHHHHHHHHHHHhh---c-cCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEE
Q 022185 6 NFINPDELSMQCILIALNRFLQ---E-KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL 81 (301)
Q Consensus 6 ~~~~~e~~sa~~~~~~~~~~~~---~-~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~ 81 (301)
...+++++|+..++..+...-. . ...... .+.+|+ ..+++++.+. .| +|+++++|++|+.+++ .+. |+
T Consensus 168 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~~l~~~~~~~---~g-~i~~~~~V~~i~~~~~-~v~-v~ 239 (431)
T 3k7m_X 168 LGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGS-ADLVDAMSQE---IP-EIRLQTVVTGIDQSGD-VVN-VT 239 (431)
T ss_dssp HSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCT-HHHHHHHHTT---CS-CEESSCCEEEEECSSS-SEE-EE
T ss_pred cCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcH-HHHHHHHHhh---CC-ceEeCCEEEEEEEcCC-eEE-EE
Confidence 4567788888877655543200 0 011122 678996 8888877753 46 9999999999998544 464 88
Q ss_pred EeCCcEEecCEEEEccChhhHhhcC-CchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecCccchhhhhcc
Q 022185 82 LTNGNVIDGDAYVFATPVDILKLQL-PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMS 160 (301)
Q Consensus 82 ~~~g~~~~ad~VI~a~p~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s 160 (301)
+.+|++++||.||+|+|+++++++. .+. ++....+++....+....++.+.++++++. +....++....+
T Consensus 240 ~~~g~~~~ad~vi~a~~~~~l~~i~~~p~-l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~----i~~~~d~~~~~~---- 310 (431)
T 3k7m_X 240 VKDGHAFQAHSVIVATPMNTWRRIVFTPA-LPERRRSVIEEGHGGQGLKILIHVRGAEAG----IECVGDGIFPTL---- 310 (431)
T ss_dssp ETTSCCEEEEEEEECSCGGGGGGSEEESC-CCHHHHHHHHHCCCCCEEEEEEEEESCCTT----EEEEBSSSSSEE----
T ss_pred ECCCCEEEeCEEEEecCcchHhheeeCCC-CCHHHHHHHHhCCCcceEEEEEEECCCCcC----ceEcCCCCEEEE----
Confidence 8888789999999999999998874 222 244566677777787889999999988752 111222211111
Q ss_pred cccccccC-CCCcEEEEEecCCCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeec---CC--ccee-cC
Q 022185 161 LTCKEYYN-PNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKT---PR--SVYK-TI 233 (301)
Q Consensus 161 ~~~~~~~~-~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~---~~--~~~~-~~ 233 (301)
...... .+..++.. +.....+...+. +.+.+.|++++|+.. ++.....+| |+ +.|. ..
T Consensus 311 --~~~~~~~~~~~~l~~-~~~g~~~~~~~~----~~~~~~l~~~~~~~~--------~~~~~~~~W~~d~~~~G~~~~~~ 375 (431)
T 3k7m_X 311 --YDYCEVSESERLLVA-FTDSGSFDPTDI----GAVKDAVLYYLPEVE--------VLGIDYHDWIADPLFEGPWVAPR 375 (431)
T ss_dssp --EEEEECSSSEEEEEE-EEETTTCCTTCH----HHHHHHHHHHCTTCE--------EEEEECCCTTTCTTTSSSSCCCC
T ss_pred --EeCcCCCCCCeEEEE-EeccccCCCCCH----HHHHHHHHHhcCCCC--------ccEeEecccCCCCCCCCCCCCcC
Confidence 111112 23233332 322222433333 246678888998752 333323333 33 3343 34
Q ss_pred CCCC-CCCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 234 PNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 234 ~g~~-~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
||.. .+++.+..|.+||||||++++..|+++|+||++||.+||++|+..+
T Consensus 376 ~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~~ 426 (431)
T 3k7m_X 376 VGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHSH 426 (431)
T ss_dssp TTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhhh
Confidence 5653 3456667789999999999998888999999999999999998753
No 20
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.83 E-value=1.3e-20 Score=176.57 Aligned_cols=245 Identities=14% Similarity=0.143 Sum_probs=149.0
Q ss_pred eeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhc---------
Q 022185 35 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ--------- 105 (301)
Q Consensus 35 ~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l--------- 105 (301)
.++.| + ++|+++|++.|+ +++|++|++|++|...+++.+ .|++.+|++++||+||+|+|+.+++..
T Consensus 196 ~~~~g-~-~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~ 270 (516)
T 1rsg_A 196 AFALN-Y-DSVVQRIAQSFP--QNWLKLSCEVKSITREPSKNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRG 270 (516)
T ss_dssp EEESC-H-HHHHHHHHTTSC--GGGEETTCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTT
T ss_pred hhhhC-H-HHHHHHHHHhCC--CCEEEECCEEEEEEEcCCCeE-EEEECCCcEEECCEEEECCCHHHhhhcccccccccc
Confidence 45667 7 899999988773 368999999999998534445 488888988999999999999998632
Q ss_pred ----CCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCcc-ceeeeecC---ccchhhhhcc-----------------
Q 022185 106 ----LPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLFSRS---SLLSVYADMS----------------- 160 (301)
Q Consensus 106 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~---~~~~~~~~~s----------------- 160 (301)
.|+ +|..+.++++++.|.+..|+++.|++++|... ..+..... ++...+....
T Consensus 271 ~i~f~P~--Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (516)
T 1rsg_A 271 RIEFQPP--LKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKH 348 (516)
T ss_dssp CCEEESC--CCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC--------
T ss_pred ceEecCC--CCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccc
Confidence 244 25567788899999999999999999998632 22222111 1111111100
Q ss_pred ---c-c-cc----c-ccCCCCcEEEEEecC--CCccCCC--ChHHHHHH---HHHHHHHhCC------CCcccccc----
Q 022185 161 ---L-T-CK----E-YYNPNQSMLELVFAP--AEEWISC--SDSEIIDA---TMKELAKLFP------DEISADQS---- 213 (301)
Q Consensus 161 ---~-~-~~----~-~~~~g~~~l~~~~~~--~~~~~~~--~~~~~~~~---~~~~l~~~~p------~~~~~~~~---- 213 (301)
. + .+ . ..+.+..++.....+ +..+..+ +++++.+. +++.|.++|+ +...+++.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~ 428 (516)
T 1rsg_A 349 TSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANAN 428 (516)
T ss_dssp -CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CC
T ss_pred cccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccC
Confidence 0 0 01 0 112334455433322 2334455 77777554 6666666664 22111000
Q ss_pred CceEEEEEEeec---CC--ccee-cCCCCCCC--CCCC-CCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 022185 214 KAKIVKYHVVKT---PR--SVYK-TIPNCEPC--RPLQ-RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 214 ~~~~~~~~~~~~---~~--~~~~-~~~g~~~~--~~~~-~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
...+......+| |+ +.|. ..||.... .... ..+.++|||||++++..++++|+||++||.++|++|++.+.
T Consensus 429 ~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~ 508 (516)
T 1rsg_A 429 KPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK 508 (516)
T ss_dssp SCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhh
Confidence 001112223333 33 3343 23444211 0111 13668999999999987789999999999999999999876
Q ss_pred hh
Q 022185 285 LL 286 (301)
Q Consensus 285 ~~ 286 (301)
..
T Consensus 509 ~~ 510 (516)
T 1rsg_A 509 LE 510 (516)
T ss_dssp GG
T ss_pred hh
Confidence 53
No 21
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.82 E-value=3.2e-20 Score=177.22 Aligned_cols=272 Identities=13% Similarity=0.081 Sum_probs=167.6
Q ss_pred CCCccccHHHHHHHHHHHhhccCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceee--EEEecCCC------cEEE
Q 022185 8 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ--KIELNDDG------TVKN 79 (301)
Q Consensus 8 ~~~e~~sa~~~~~~~~~~~~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~--~I~~~~~g------~v~~ 79 (301)
.+....|...++... + ...+.+.+++.||+ ++|+++|++.+.. |++|+++++|+ +|.+++++ .|.
T Consensus 317 ~~~~~~S~le~L~~~---~-~~~~~~~~~i~GG~-~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~- 389 (721)
T 3ayj_A 317 KPLYNISLVEMMRLI---L-WDYSNEYTLPVTEN-VEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQL- 389 (721)
T ss_dssp GGGTTBBHHHHHHHH---H-TTTTCEECCSSSST-HHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEE-
T ss_pred CCccchhHHHHHHHH---h-cCCccceeEECCcH-HHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEE-
Confidence 344567766554333 1 22345678899996 9999999998742 67899999999 99986555 253
Q ss_pred E-EEeCCc--EEecCEEEEccChhhHhh------cC-----------------------Cchhhh-------cHHHHHHh
Q 022185 80 F-LLTNGN--VIDGDAYVFATPVDILKL------QL-----------------------PENWKE-------MAYFKRLE 120 (301)
Q Consensus 80 V-~~~~g~--~~~ad~VI~a~p~~~l~~------l~-----------------------~~~~~~-------~~~~~~~~ 120 (301)
| .+.+|+ +++||+||+|+|++.+.. +- ++.++| ..+.++++
T Consensus 390 V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~ 469 (721)
T 3ayj_A 390 LSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIG 469 (721)
T ss_dssp EEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHH
T ss_pred EEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHH
Confidence 6 344676 789999999999999853 21 221214 46778899
Q ss_pred hcCCcCeEEEEEEe-----cccCCCcc-c---eeeeecCccchhhhhcccccccccCCCCcEEEEEecC---CCcc----
Q 022185 121 KLVGVPVINIHIWF-----DRKLKNTY-D---HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP---AEEW---- 184 (301)
Q Consensus 121 ~~~~~~~~~~~l~~-----~~~~~~~~-~---~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~---~~~~---- 184 (301)
++.|.+..|+++.| +++||... + ...+++.+...++.-++....++.+++.+++.+.|.. +..|
T Consensus 470 ~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~ 549 (721)
T 3ayj_A 470 QLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDF 549 (721)
T ss_dssp TCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTC
T ss_pred hcCcccceEEEEEEccccCCCCcccccCCCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccc
Confidence 99999999999999 89998632 1 1123343332111100000001223344555444432 2234
Q ss_pred --CCCChHH-------HHHHHHHHHH--HhCCCCcc----------ccccCceEEEEEEeecC-Cccee-cCCCCC----
Q 022185 185 --ISCSDSE-------IIDATMKELA--KLFPDEIS----------ADQSKAKIVKYHVVKTP-RSVYK-TIPNCE---- 237 (301)
Q Consensus 185 --~~~~~~~-------~~~~~~~~l~--~~~p~~~~----------~~~~~~~~~~~~~~~~~-~~~~~-~~~g~~---- 237 (301)
..+++++ +.+.+++.|. ++||+... ..+.....+.+.+...| .+.|. +.||+.
T Consensus 550 g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~ 629 (721)
T 3ayj_A 550 GLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSN 629 (721)
T ss_dssp CSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHH
T ss_pred cccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhh
Confidence 3334434 4899999999 88886430 00101112333333444 23343 356651
Q ss_pred ---CCC--CCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhh
Q 022185 238 ---PCR--PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 287 (301)
Q Consensus 238 ---~~~--~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~ 287 (301)
++. .....+.++||||||+++. +.|+++||++||.+||..|+..++...
T Consensus 630 l~~~~~~~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~~ 683 (721)
T 3ayj_A 630 LCFRYHTHALAASLDNRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRANRGD 683 (721)
T ss_dssp HHHHGGGGGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhhhccccCCCCCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhcCCC
Confidence 121 1123456899999999985 568999999999999999999875543
No 22
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.79 E-value=2.2e-19 Score=166.77 Aligned_cols=260 Identities=13% Similarity=0.122 Sum_probs=171.6
Q ss_pred ccCCCCccccHHHH---------HHHHHHHhhcc------CCceEeee-cCCCcccchHHHHHHHHHcCcEEEec--cee
Q 022185 5 LNFINPDELSMQCI---------LIALNRFLQEK------HGSKMAFL-DGNPPERLCLPIVEHIQSLGGEVRLN--SRV 66 (301)
Q Consensus 5 ~~~~~~e~~sa~~~---------~~~~~~~~~~~------~~~~~~~~-~GG~~~~l~~~l~~~l~~~g~~I~l~--~~V 66 (301)
.+..+++++|+.++ ...+...+... ....+.|| +||+ ++|+++|++.|++ .+|+++ ++|
T Consensus 163 v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~-~~l~~~la~~l~~--~~i~~~~~~~V 239 (484)
T 4dsg_A 163 VWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGT-GIIYQAIKEKLPS--EKLTFNSGFQA 239 (484)
T ss_dssp HHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCT-HHHHHHHHHHSCG--GGEEECGGGCE
T ss_pred hcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCH-HHHHHHHHhhhhh--CeEEECCCcee
Confidence 45778888887542 12222222211 13356777 5996 9999999998843 389999 569
Q ss_pred eEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCc--hhhhcHHHHHHhhcCCcCeEEEEEEecccCCC--cc
Q 022185 67 QKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN--TY 142 (301)
Q Consensus 67 ~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~ 142 (301)
++|... ++. |++.+|++++||.||+|+|++.+.+++++ ...+....+.+.++.|.++.++++.++++... ..
T Consensus 240 ~~I~~~-~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~ 315 (484)
T 4dsg_A 240 IAIDAD-AKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKT 315 (484)
T ss_dssp EEEETT-TTE---EEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTT
T ss_pred EEEEec-CCE---EEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCC
Confidence 999984 443 45678888999999999999999988743 11234566678899999999999999876422 11
Q ss_pred ceeee-ecCc--cchhhhhcccccccccCCCCcEEEEEecCCCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEE
Q 022185 143 DHLLF-SRSS--LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVK 219 (301)
Q Consensus 143 ~~~~~-~~~~--~~~~~~~~s~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 219 (301)
+++++ .+.+ ...+ ..++.+++..+|++++++.+.+... .....+++++++.++++|.++.. +.. ...+..
T Consensus 316 ~~~i~vp~~~~~~~ri-~~~s~~~p~~ap~g~~~l~~e~~~~-~~~~~~d~~l~~~a~~~L~~~~~-~~~----~~~~~~ 388 (484)
T 4dsg_A 316 ACWLYFPEDTSPFYRA-TVFSNYSKYNVPEGHWSLMLEVSES-KYKPVNHSTLIEDCIVGCLASNL-LLP----EDLLVS 388 (484)
T ss_dssp CCEEECCSTTCSCSEE-ECGGGTCGGGSCTTEEEEEEEEEEB-TTBCCCTTSHHHHHHHHHHHTTS-CCT----TCCEEE
T ss_pred CeEEEEEcCCCeEEEE-EeecCCCcccCCCCeEEEEEEEecC-cCCcCCHHHHHHHHHHHHHHcCC-CCc----cceEEE
Confidence 33443 3322 2211 1234455666777766665555433 34467899999999999999853 221 112344
Q ss_pred EEEeecCCcceecCCCCCC----CCCCCCCCCCCeEEeeccccCCCC-CchhHHHHHHHHHHHHHH
Q 022185 220 YHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCAQAIV 280 (301)
Q Consensus 220 ~~~~~~~~~~~~~~~g~~~----~~~~~~~p~~~l~~aGd~~~~~~~-~~v~gA~~SG~~aA~~i~ 280 (301)
..+.+++.+.+.+.+++.. .+..... . ||+++|.+....|. .+++.|+.||+.||++|+
T Consensus 389 ~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 389 KWHYRIEKGYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp EEEEEEEEEEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCccccCCCccHHHHHHHHHHHHHh-C-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 4566777776665666421 1221222 3 89999997766553 379999999999999998
No 23
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.79 E-value=4.2e-19 Score=165.77 Aligned_cols=232 Identities=12% Similarity=0.092 Sum_probs=157.3
Q ss_pred EeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCchhhhc
Q 022185 34 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEM 113 (301)
Q Consensus 34 ~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~ 113 (301)
.+.++||+ ++++++|++.|++.|++|+++++|++|..+ +++ |++.+|++++||.||+|+|++.+.+++++.
T Consensus 214 ~~~~~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~~---v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~---- 284 (513)
T 4gde_A 214 RFPARGGT-GGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NKT---VTLQDGTTIGYKKLVSTMAVDFLAEAMNDQ---- 284 (513)
T ss_dssp EEESSSHH-HHHHHHHHHTSCGGGEEESGGGCEEEEETT-TTE---EEETTSCEEEEEEEEECSCHHHHHHHTTCH----
T ss_pred eecccCCH-HHHHHHHHHHHHhcCeeeecceEEEEEEcc-CCE---EEEcCCCEEECCEEEECCCHHHHHHhcCch----
Confidence 33458996 999999999999999999999999999983 442 667799999999999999999999988753
Q ss_pred HHHHHHhhcCCcCeEEEEEEecccCCC--ccceeee-ecC--ccchhhhhcccccccccCCCCc----------------
Q 022185 114 AYFKRLEKLVGVPVINIHIWFDRKLKN--TYDHLLF-SRS--SLLSVYADMSLTCKEYYNPNQS---------------- 172 (301)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~-~~~--~~~~~~~~~s~~~~~~~~~g~~---------------- 172 (301)
+...+...+.|.++..+.+.++..... ....+++ .+. ++.++. .++...+...|++..
T Consensus 285 ~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~-~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~ 363 (513)
T 4gde_A 285 ELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRAT-IFSNYSPYNQPEASAALPTMQLADGSRPQST 363 (513)
T ss_dssp HHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEE-CGGGTCGGGSCCTTCCEECCEETTSCCCSCC
T ss_pred hhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEE-ecCCCCcccCCCCCceEEEEEeccCCCcccc
Confidence 234456778888888888888765322 1123333 222 221110 111122222222221
Q ss_pred -----EEEEEe--cCCCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCC----CCC
Q 022185 173 -----MLELVF--APAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRP 241 (301)
Q Consensus 173 -----~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~ 241 (301)
.+...+ .....+..++++++++.++++|.++.+... ...++...+.++|++.+.+..|+.. .++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~-----~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~ 438 (513)
T 4gde_A 364 EAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKP-----TDEIVSTYHRRFDHGYPTPTLEREGTLTQILP 438 (513)
T ss_dssp SEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCT-----TCEEEEEEEEEEEEEEECCBTTHHHHHHHHHH
T ss_pred cCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCC-----ccceEEEEEEECCCeecccCHhHHHHHHHHHH
Confidence 111111 112345578999999999999999986432 2367777788888876655555421 122
Q ss_pred CCCCCCCCeEEeeccccCCCC-CchhHHHHHHHHHHHHHHHH
Q 022185 242 LQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 242 ~~~~p~~~l~~aGd~~~~~~~-~~v~gA~~SG~~aA~~i~~~ 282 (301)
.+.. +|||++|.+....|. +.|+.|+++|+.||++|+..
T Consensus 439 ~l~~--~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 439 KLQD--KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp HHHH--TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred HHhh--cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 2222 599999987766653 57999999999999999974
No 24
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.68 E-value=2.9e-15 Score=132.12 Aligned_cols=216 Identities=16% Similarity=0.145 Sum_probs=137.5
Q ss_pred HHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEE-ecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcC
Q 022185 48 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVP 126 (301)
Q Consensus 48 ~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~-~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 126 (301)
.|.+.+. .|++|+++++|++|+.++++ +. |++.+|+.. +||.||+|+|++.+.++++.. + .....+..+.|.+
T Consensus 111 ~l~~~l~-~g~~i~~~~~v~~i~~~~~~-~~-v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~--~-~l~~~~~~~~~~~ 184 (336)
T 1yvv_A 111 AITRAMR-GDMPVSFSCRITEVFRGEEH-WN-LLDAEGQNHGPFSHVIIATPAPQASTLLAAA--P-KLASVVAGVKMDP 184 (336)
T ss_dssp HHHHHHH-TTCCEECSCCEEEEEECSSC-EE-EEETTSCEEEEESEEEECSCHHHHGGGGTTC--H-HHHHHHTTCCEEE
T ss_pred HHHHHHH-ccCcEEecCEEEEEEEeCCE-EE-EEeCCCcCccccCEEEEcCCHHHHHHhhccC--H-HHHHHHhhcCccc
Confidence 3444442 38899999999999986554 64 788888766 499999999999988877542 2 3445677888888
Q ss_pred eEEEEEEecccCCCccceeeeecCccchhhhhcccccccccCCCC-cEEEEEecC--CCccCCCChHHHHHHHHHHHHHh
Q 022185 127 VINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQ-SMLELVFAP--AEEWISCSDSEIIDATMKELAKL 203 (301)
Q Consensus 127 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~-~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 203 (301)
+.++++.++++++......++.+.++..++.+.+ .+.. .+. ..+.+...+ ...+.+++++++.+.+++.|.++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~p~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (336)
T 1yvv_A 185 TWAVALAFETPLQTPMQGCFVQDSPLDWLARNRS--KPER--DDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAEL 260 (336)
T ss_dssp EEEEEEEESSCCSCCCCEEEECSSSEEEEEEGGG--STTC--CCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTT
T ss_pred eeEEEEEecCCCCCCCCeEEeCCCceeEEEecCc--CCCC--CCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999998877654444444333322221111 1111 111 122222222 24466789999999999999999
Q ss_pred CCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 204 FPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
++.... .+......+|.++.+....+. +....+.+||+||||+++. +++++|+.||..+|+.|.+.+
T Consensus 261 lg~~~~------~p~~~~~~rw~~a~~~~~~~~----~~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 261 IDCTMP------APVFSLAHRWLYARPAGAHEW----GALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp CSSCCC------CCSEEEEEEEEEEEESSCCCC----SCEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCC------CCcEEEccccCccCCCCCCCC----CeeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 974211 011112333333322211111 1112345799999999975 699999999999999999987
Q ss_pred hhh
Q 022185 284 VLL 286 (301)
Q Consensus 284 ~~~ 286 (301)
...
T Consensus 328 ~~~ 330 (336)
T 1yvv_A 328 QLE 330 (336)
T ss_dssp TC-
T ss_pred hhh
Confidence 543
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.62 E-value=2.9e-15 Score=136.57 Aligned_cols=245 Identities=10% Similarity=0.106 Sum_probs=140.5
Q ss_pred CCCCccccHHHHHHHHHHH--hhccCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC
Q 022185 7 FINPDELSMQCILIALNRF--LQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN 84 (301)
Q Consensus 7 ~~~~e~~sa~~~~~~~~~~--~~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~ 84 (301)
+.+++++|+.+++.++... +....+ ..+.+.||+ ++++++|.+.+ +.+|+++++|++|..+ ++++. |++.+
T Consensus 170 ~~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~g~-~~l~~~l~~~l---~~~v~~~~~V~~i~~~-~~~v~-v~~~~ 242 (424)
T 2b9w_A 170 YGHFDNVPAAYVLKYLDFVTMMSFAKG-DLWTWADGT-QAMFEHLNATL---EHPAERNVDITRITRE-DGKVH-IHTTD 242 (424)
T ss_dssp CCCTTTSBHHHHHHHSCHHHHHHHHHT-CCBCCTTCH-HHHHHHHHHHS---SSCCBCSCCEEEEECC-TTCEE-EEESS
T ss_pred cCChHhcCHHHHHHhhhHhhhhcccCC-ceEEeCChH-HHHHHHHHHhh---cceEEcCCEEEEEEEE-CCEEE-EEECC
Confidence 4578899998875433221 111112 235678996 99999999877 5689999999999985 44565 88877
Q ss_pred CcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecC--c-cchhhhhccc
Q 022185 85 GNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRS--S-LLSVYADMSL 161 (301)
Q Consensus 85 g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~s~ 161 (301)
|+ ++||.||+|+|+..+.+++++. + +..+.+.++.+.+. .+.+.+...++. +.. ++... + ..+.. .
T Consensus 243 g~-~~ad~Vv~a~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~g~~--~-- 311 (424)
T 2b9w_A 243 WD-RESDVLVLTVPLEKFLDYSDAD--D-DEREYFSKIIHQQY-MVDACLVKEYPT-ISG-YVPDNMRPERLGHV--M-- 311 (424)
T ss_dssp CE-EEESEEEECSCHHHHTTSBCCC--H-HHHHHHTTCEEEEE-EEEEEEESSCCS-SEE-ECGGGGSGGGTTSC--C--
T ss_pred Ce-EEcCEEEECCCHHHHhhccCCC--H-HHHHHHhcCCccee-EEEEEEeccCCc-ccc-cccCCCCCcCCCcc--e--
Confidence 75 8999999999999887777642 2 22233456665442 223333333321 111 11111 0 11000 0
Q ss_pred ccccccCCC-CcEEEEEe-cCCCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEE-EEeecCC-cceecCCCCC
Q 022185 162 TCKEYYNPN-QSMLELVF-APAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY-HVVKTPR-SVYKTIPNCE 237 (301)
Q Consensus 162 ~~~~~~~~g-~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~g~~ 237 (301)
......+++ ..++..+. .+...+...+++++.+.+++.|.++.+... .++.. .+...|. +......|..
T Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~~~-------~~~~~~~w~~~p~~~~~~~~~G~~ 384 (424)
T 2b9w_A 312 VYYHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHPVE-------KIIEEQTWYYFPHVSSEDYKAGWY 384 (424)
T ss_dssp EEEECCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCCEE-------EEEEEEEEEEEEECCHHHHHTTHH
T ss_pred EEeeecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCccc-------ccccccceeeeeccCHHHHhccHH
Confidence 001111222 23443332 334456677889999999999999544321 11211 1111111 0001111211
Q ss_pred CCCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHH
Q 022185 238 PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 280 (301)
Q Consensus 238 ~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~ 280 (301)
+ +.....+.+||||||+|++. +.+|+|+.||+++|++|+
T Consensus 385 ~-~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 385 E-KVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp H-HHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred H-HHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 0 11112345799999999975 579999999999999875
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.14 E-value=2.1e-09 Score=98.75 Aligned_cols=195 Identities=12% Similarity=0.042 Sum_probs=117.3
Q ss_pred ceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecC-CCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCchh
Q 022185 32 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 110 (301)
Q Consensus 32 ~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~-~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~ 110 (301)
..+.||+||+ +.|+++|++.++++|++|+++++|++|.... ++++++|++ +|++++||.||+++++..- ++
T Consensus 232 ~~~~~p~gG~-~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~-~l----- 303 (453)
T 2bcg_G 232 SPYLYPMYGL-GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE-KC----- 303 (453)
T ss_dssp CSEEEETTCT-THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG-GE-----
T ss_pred CceEeeCCCH-HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch-hh-----
Confidence 3566999996 9999999999999999999999999999842 566767777 6788999999999988521 11
Q ss_pred hhcHHHHHHhhcC-CcCeEEEEEEecccCCC----ccceeeeecC-----ccchhhhhcccccccccCCCCcEEEEEe-c
Q 022185 111 KEMAYFKRLEKLV-GVPVINIHIWFDRKLKN----TYDHLLFSRS-----SLLSVYADMSLTCKEYYNPNQSMLELVF-A 179 (301)
Q Consensus 111 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~s~~~~~~~~~g~~~l~~~~-~ 179 (301)
.+.. + ....++.+++++.. ....++++.. +...+ ...|... ..+|+|++++.++. .
T Consensus 304 ---------~~~~~~--~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v-~~~s~~d-~~aP~G~~~~~v~~~~ 370 (453)
T 2bcg_G 304 ---------KSTGQR--VIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYV-AIVSDAH-NVCSKGHYLAIISTII 370 (453)
T ss_dssp ---------EEEEEE--EEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEE-EEEEGGG-TSSCTTCEEEEEEEEC
T ss_pred ---------cccCCc--ceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEE-EEeCCCC-CCCCCCcEEEEEEEec
Confidence 1111 2 11222227776531 1112344321 11111 1122222 45788877765443 3
Q ss_pred CCCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCCCCCCeEEeeccccC
Q 022185 180 PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQ 259 (301)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~l~~aGd~~~~ 259 (301)
+. .+.++- +...++++.|... ..+.... .|... .....+|||+||++...
T Consensus 371 ~~-----~~~~~~---l~~~~~~l~~~~~-------~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~~ 420 (453)
T 2bcg_G 371 ET-----DKPHIE---LEPAFKLLGPIEE-------KFMGIAE------LFEPR---------EDGSKDNIYLSRSYDAS 420 (453)
T ss_dssp CS-----SCHHHH---THHHHGGGCSCSE-------EEEEEEE------EEEES---------SCSTTTSEEECCCCCSC
T ss_pred CC-----CCHHHH---HHHHHHHhhhHHH-------hhccchh------eeeec---------CCCCCCCEEECCCCCcc
Confidence 31 122322 3344444455432 2222211 22111 11223799999998765
Q ss_pred CCCCchhHHHHHHHHHHHHHH
Q 022185 260 KYLASMEGAVLSGKLCAQAIV 280 (301)
Q Consensus 260 ~~~~~v~gA~~SG~~aA~~i~ 280 (301)
..+++++.+++.++++|.
T Consensus 421 ---~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 421 ---SHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp ---SBSHHHHHHHHHHHHHHH
T ss_pred ---ccHHHHHHHHHHHHHHHH
Confidence 467999999999999998
No 27
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.07 E-value=3.4e-09 Score=96.72 Aligned_cols=194 Identities=14% Similarity=0.132 Sum_probs=116.6
Q ss_pred ceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCchhh
Q 022185 32 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWK 111 (301)
Q Consensus 32 ~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~ 111 (301)
..+.+|+||+ +.|+++|++.+++.|++|+++++|++|... ++++.+|++ +|++++||.||+|+|+... .+..
T Consensus 224 ~~~~~p~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~~~--~~~~--- 295 (433)
T 1d5t_A 224 SPYLYPLYGL-GELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYVPD--RVRK--- 295 (433)
T ss_dssp CSEEEETTCT-THHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGCGG--GEEE---
T ss_pred CcEEEeCcCH-HHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCCcc--cccc---
Confidence 3578999995 999999999999999999999999999984 566765664 7888999999999988641 1111
Q ss_pred hcHHHHHHhhcCCcCeEEEEEEecccCCC----ccceeeeecC-----ccchhhhhcccccccccCCCCcEEEEEe-cCC
Q 022185 112 EMAYFKRLEKLVGVPVINIHIWFDRKLKN----TYDHLLFSRS-----SLLSVYADMSLTCKEYYNPNQSMLELVF-APA 181 (301)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~s~~~~~~~~~g~~~l~~~~-~~~ 181 (301)
+. ...+.+ .+ +++++.. ....+++... +...+ ...| ..+..+|+|++++.++. .+.
T Consensus 296 -------~~--~~~~~~--~i-l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v-~~~s-~d~~~aP~G~~~~~~~~~~p~ 361 (433)
T 1d5t_A 296 -------AG--QVIRII--CI-LSHPIKNTNDANSCQIIIPQNQVNRKSDIYV-CMIS-YAHNVAAQGKYIAIASTTVET 361 (433)
T ss_dssp -------EE--EEEEEE--EE-ESSCCTTSTTCSSEEEEECGGGTTCSSCEEE-EEEE-GGGTSSCTTCEEEEEEEECCS
T ss_pred -------cC--cceeEE--EE-EcCcccccCCCceEEEEeCccccCCCCCEEE-EEEC-CCCcccCCCCEEEEEEEecCC
Confidence 11 111122 22 6766532 1223333321 11111 1223 44556888887765433 332
Q ss_pred CccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCCCCCCeEEeeccccCCC
Q 022185 182 EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKY 261 (301)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~l~~aGd~~~~~~ 261 (301)
.+.+ +.+...++++.|... +.+... ..|.. ......+|||+++++-..
T Consensus 362 -----~~~~---~~l~~~~~~l~~~~~-------~~~~~~------~~~~~---------~~~~~~~~~~~~~~~d~~-- 409 (433)
T 1d5t_A 362 -----TDPE---KEVEPALGLLEPIDQ-------KFVAIS------DLYEP---------IDDGSESQVFCSCSYDAT-- 409 (433)
T ss_dssp -----SCHH---HHTHHHHTTTCSCSE-------EEEEEE------EEEEE---------SCCSTTTCEEECCCCCSC--
T ss_pred -----CCHH---HHHHHHHHHhhhHHh-------heeccc------eeeee---------cCCCCCCCEEECCCCCcc--
Confidence 1222 234444444555532 233222 11211 111223799999987655
Q ss_pred CCchhHHHHHHHHHHHHHH
Q 022185 262 LASMEGAVLSGKLCAQAIV 280 (301)
Q Consensus 262 ~~~v~gA~~SG~~aA~~i~ 280 (301)
..+++++.+++..-++|.
T Consensus 410 -~~~e~~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 410 -THFETTCNDIKDIYKRMA 427 (433)
T ss_dssp -SBSHHHHHHHHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHHHHh
Confidence 457999999988888875
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.97 E-value=1.9e-11 Score=110.56 Aligned_cols=115 Identities=12% Similarity=-0.027 Sum_probs=74.8
Q ss_pred ccCCCCccccHHHHHHHHHHHhhccC--CceE-eeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEE
Q 022185 5 LNFINPDELSMQCILIALNRFLQEKH--GSKM-AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL 81 (301)
Q Consensus 5 ~~~~~~e~~sa~~~~~~~~~~~~~~~--~~~~-~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~ 81 (301)
.+..+++++|+.++.....++..... ...+ .+|+||+ ++|+++|++. .|++|++|++|++|... |
T Consensus 165 ~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~~---~g~~I~l~~~V~~I~~~----v---- 232 (399)
T 1v0j_A 165 QWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGY-TAWLQNMAAD---HRIEVRLNTDWFDVRGQ----L---- 232 (399)
T ss_dssp HHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHH-HHHHHHHTCS---TTEEEECSCCHHHHHHH----H----
T ss_pred hcCCChhhcChHhhhcceeEeccccchhhhhhcccccccH-HHHHHHHHhc---CCeEEEECCchhhhhhh----h----
Confidence 35678888888765211111111111 1123 4899996 9999999874 48899999999999751 2
Q ss_pred EeCCcEE-ecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeee
Q 022185 82 LTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLF 147 (301)
Q Consensus 82 ~~~g~~~-~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 147 (301)
+ ++ +||.||+|+|+..+.++. +.++.|.++.++.+.++.+...+...+.+
T Consensus 233 --~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~~~~~~~~~~~~~~~ 283 (399)
T 1v0j_A 233 --R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEVLPIGDFQGTAVMNY 283 (399)
T ss_dssp --T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSSCSSSSSEEEE
T ss_pred --h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEEEccccCCCCeEEEe
Confidence 1 34 799999999999877651 23567777777888887654333333334
No 29
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.96 E-value=7.9e-11 Score=94.51 Aligned_cols=101 Identities=20% Similarity=0.133 Sum_probs=69.1
Q ss_pred CCccCCCChHHHHHHHHHHHHHhC-CCCccccccCceE--EEEEEeecCC--cceec-CCCCC-CCCCCCCCCCCCeEEe
Q 022185 181 AEEWISCSDSEIIDATMKELAKLF-PDEISADQSKAKI--VKYHVVKTPR--SVYKT-IPNCE-PCRPLQRSPVEGFYLA 253 (301)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~l~~~~-p~~~~~~~~~~~~--~~~~~~~~~~--~~~~~-~~g~~-~~~~~~~~p~~~l~~a 253 (301)
+..|..++++++++.+++.|.++| |+. .+ +. .. +...+...|+ +.|.. .||.. .+.+.+..|.++||||
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~-~~--~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FA 123 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRI-EV-FY--TGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFA 123 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGG-GG-TE--EEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEEC
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCc-Hh-hc--cCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEE
Confidence 356778899999999999999999 443 11 11 12 2223333344 33542 45542 1233345678899999
Q ss_pred eccccCCCCCchhHHHHHHHHHHHHHHHHhhhh
Q 022185 254 GDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 286 (301)
Q Consensus 254 Gd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~ 286 (301)
|++++. ++++|+||++||+++|++|++.++..
T Consensus 124 Ge~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~ 155 (181)
T 2e1m_C 124 GEHVSL-KHAWIEGAVETAVRAAIAVNEAPVGD 155 (181)
T ss_dssp SGGGTT-STTSHHHHHHHHHHHHHHHHTCCC--
T ss_pred EHHHcC-CccCHHHHHHHHHHHHHHHHHHhccC
Confidence 999996 77899999999999999999877543
No 30
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.90 E-value=5.8e-09 Score=95.72 Aligned_cols=90 Identities=13% Similarity=0.069 Sum_probs=71.1
Q ss_pred CccccHHHHHHHHHHHh---hccCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCc
Q 022185 10 PDELSMQCILIALNRFL---QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN 86 (301)
Q Consensus 10 ~e~~sa~~~~~~~~~~~---~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~ 86 (301)
..+.|+...+..+..|+ ...+++.+.||+||+ +.|+++|++.++++|++|+++++|++|..+++|++++|++.+|+
T Consensus 221 ~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~-~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~ 299 (475)
T 3p1w_A 221 YLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGL-GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGE 299 (475)
T ss_dssp GGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCT-THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSC
T ss_pred cccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCH-HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCc
Confidence 34567776665544443 223467899999996 99999999999999999999999999998556778889998888
Q ss_pred EEecCEEEEccChh
Q 022185 87 VIDGDAYVFATPVD 100 (301)
Q Consensus 87 ~~~ad~VI~a~p~~ 100 (301)
+++||.||++....
T Consensus 300 ~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 300 IAYCDKVICDPSYV 313 (475)
T ss_dssp EEEEEEEEECGGGC
T ss_pred EEECCEEEECCCcc
Confidence 89999999998653
No 31
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.90 E-value=7.7e-08 Score=91.03 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=80.7
Q ss_pred CCCccccHHHHHHHHHHHh---hccCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCC-CcEEEEEEe
Q 022185 8 INPDELSMQCILIALNRFL---QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLT 83 (301)
Q Consensus 8 ~~~e~~sa~~~~~~~~~~~---~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~-g~v~~V~~~ 83 (301)
.+.+..++...+..+..|+ .......+.|+.||+ +.|+++|++.++++|++|+++++|++|..+++ |++++|++.
T Consensus 341 ~~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~-g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~ 419 (650)
T 1vg0_A 341 TSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQ-GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQ 419 (650)
T ss_dssp --CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCT-THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEET
T ss_pred cCCCCCchhHHHHHHHHHHHHHHhhccCceEEeCCch-hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeC
Confidence 3344445555543333332 222334789999996 99999999999999999999999999998543 788888877
Q ss_pred CCcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEecccCC
Q 022185 84 NGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 139 (301)
Q Consensus 84 ~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 139 (301)
+|++++||.||++. .. +|... ..++.+..+.++.+.+++++.
T Consensus 420 ~Ge~i~A~~VVs~~--~~----lp~~~--------~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 420 FGQRIISKHFIIED--SY----LSENT--------CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp TSCEEECSEEEEEG--GG----BCTTT--------TTTCCCEEEEEEEEEESSCSS
T ss_pred CCCEEEcCEEEECh--hh----cCHhH--------hccccccceEEEEEEecCCCC
Confidence 89999999999932 22 23211 012234457778888888764
No 32
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.80 E-value=5.7e-10 Score=99.70 Aligned_cols=114 Identities=14% Similarity=0.052 Sum_probs=73.1
Q ss_pred cccCCCCccccHHHHHHHHHHHhhccC--CceE-eeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEE
Q 022185 4 ALNFINPDELSMQCILIALNRFLQEKH--GSKM-AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNF 80 (301)
Q Consensus 4 ~~~~~~~e~~sa~~~~~~~~~~~~~~~--~~~~-~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V 80 (301)
..+..+++++|+.++.....++..... ...+ .+|+||+ ++++++|++ |++|++|++|++|.. .+
T Consensus 154 ~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~-----g~~i~l~~~V~~i~~----~v--- 220 (367)
T 1i8t_A 154 KQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGY-TKLIEKMLE-----GVDVKLGIDFLKDKD----SL--- 220 (367)
T ss_dssp HHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCH-HHHHHHHHT-----TSEEECSCCGGGSHH----HH---
T ss_pred hhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCH-HHHHHHHhc-----CCEEEeCCceeeech----hh---
Confidence 346788899998754211001111110 1123 4899996 999888886 689999999998863 12
Q ss_pred EEeCCcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeee
Q 022185 81 LLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFS 148 (301)
Q Consensus 81 ~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 148 (301)
..++|.||+|+|+..+.++. +.+++|.++..+.+.++++...+...+.+.
T Consensus 221 ------~~~~D~VV~a~p~~~~~~~~------------l~~l~y~s~~~v~~~~d~~~~~~~~~~~~~ 270 (367)
T 1i8t_A 221 ------ASKAHRIIYTGPIDQYFDYR------------FGALEYRSLKFETERHEFPNFQGNAVINFT 270 (367)
T ss_dssp ------HTTEEEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSSCSSSSSEEEEC
T ss_pred ------hccCCEEEEeccHHHHHHHh------------hCCCCCceEEEEEEEeccccCCCCeEEEeC
Confidence 14699999999998865431 335677777888888887643333333343
No 33
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.57 E-value=1.3e-07 Score=84.77 Aligned_cols=98 Identities=14% Similarity=0.112 Sum_probs=65.9
Q ss_pred ccCCCCccccHHHHHHHHHHH-hhcc-CCceE-eeecCCCcccchHHHHHHHHHcCcEEEecceee-EEEecCCCcEEEE
Q 022185 5 LNFINPDELSMQCILIALNRF-LQEK-HGSKM-AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ-KIELNDDGTVKNF 80 (301)
Q Consensus 5 ~~~~~~e~~sa~~~~~~~~~~-~~~~-~~~~~-~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~-~I~~~~~g~v~~V 80 (301)
.+..+++++|+.++.....++ ..+. ....+ .+|+||+ ++++++|++. .|++|+++++|+ +|..
T Consensus 159 ~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~~---~g~~I~l~~~V~~~i~~--------- 225 (384)
T 2bi7_A 159 QWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY-TQMIKSILNH---ENIKVDLQREFIVEERT--------- 225 (384)
T ss_dssp HHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH-HHHHHHHHCS---TTEEEEESCCCCGGGGG---------
T ss_pred HhCCCHHHhCHHHHhccccccccccccccccccEEECcCH-HHHHHHHHhc---CCCEEEECCeeehhhhc---------
Confidence 456788888887541010001 0010 11123 4899996 9999999873 588999999998 7752
Q ss_pred EEeCCcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEec
Q 022185 81 LLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD 135 (301)
Q Consensus 81 ~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (301)
++|.||+|+|+..+.++. +.+++|.++..+.+.++
T Consensus 226 --------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 226 --------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp --------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEEE
T ss_pred --------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEEeC
Confidence 299999999999877652 23467777777777776
No 34
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.19 E-value=7.4e-07 Score=80.03 Aligned_cols=202 Identities=13% Similarity=0.087 Sum_probs=114.4
Q ss_pred cccCCCCccccHHHHHHHHHHHhhc----cCCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEE
Q 022185 4 ALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKN 79 (301)
Q Consensus 4 ~~~~~~~e~~sa~~~~~~~~~~~~~----~~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~ 79 (301)
..+..+++++|+.++. .+...... ..+.-..+|+||+ .+|+++|++ ..|++|++|++|+++
T Consensus 182 k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gGy-~~l~e~l~~---~~g~~V~l~~~v~~~---------- 246 (397)
T 3hdq_A 182 KQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHGY-TRMFQNMLS---SPNIKVMLNTDYREI---------- 246 (397)
T ss_dssp HHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTCH-HHHHHHHTC---STTEEEEESCCGGGT----------
T ss_pred chhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCCH-HHHHHHHHh---ccCCEEEECCeEEec----------
Confidence 3467899999988552 11111111 1122235899997 899988865 359999999999732
Q ss_pred EEEeCCcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeec-Cccchhhhh
Q 022185 80 FLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSR-SSLLSVYAD 158 (301)
Q Consensus 80 V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~ 158 (301)
++++.+|.||+|+|+..+... ...++.|.+...+.+.++.+...+...+.+.+ .++.++. .
T Consensus 247 -----~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~~~~~~~~vn~~d~~p~tRi~-e 308 (397)
T 3hdq_A 247 -----ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTEQLLPTGTVNYPNDYAYTRVS-E 308 (397)
T ss_dssp -----TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSCSCSSSEEECSSSSSCSEEE-E
T ss_pred -----cccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccccCCCCeEEEeCCCCcceEEE-e
Confidence 223579999999999776321 13356777888888888865444333333432 2544432 1
Q ss_pred cccccccccCCCCcEEEEEecC--CCccCCCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCC
Q 022185 159 MSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNC 236 (301)
Q Consensus 159 ~s~~~~~~~~~g~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 236 (301)
+++. +. .+.+++++..-+.. .++.-...+++-.+...+-++.
T Consensus 309 ~k~~-~~-~~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~---------------------------------- 352 (397)
T 3hdq_A 309 FKHI-TG-QRHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEAL---------------------------------- 352 (397)
T ss_dssp HHHH-HC-CCCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHH----------------------------------
T ss_pred eccc-CC-CCCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHH----------------------------------
Confidence 1111 11 12344555543321 1111111111111111111000
Q ss_pred CCCCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 237 EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 237 ~~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
....+||+|+|-.....| -.|+-++.+|+.++++++..
T Consensus 353 -------a~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 353 -------ADAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQGQ 390 (397)
T ss_dssp -------HHHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC-
T ss_pred -------HhcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhcc
Confidence 001358999998877766 48999999999999998764
No 35
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.15 E-value=0.00011 Score=65.81 Aligned_cols=209 Identities=13% Similarity=0.149 Sum_probs=109.2
Q ss_pred EeeecCCC--cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh--HhhcCCch
Q 022185 34 MAFLDGNP--PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI--LKLQLPEN 109 (301)
Q Consensus 34 ~~~~~GG~--~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~--l~~l~~~~ 109 (301)
++++.+|. ...+.+.|.+.+++.|++|+++++|++|..+ ++++.+|++.+| +++||.||+|+.... +.+.++.
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~- 239 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGF- 239 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTC-
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCC-
Confidence 34444443 1268888999998999999999999999985 555666888777 689999999998743 2221110
Q ss_pred hhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecCccchhhhhcccccccccCCCCcEEEEEecCCCccCCCCh
Q 022185 110 WKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSD 189 (301)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~~~~~~~~~~ 189 (301)
.+...+.....+.+ ++........+++.... .+ ..+. +.+.-.+.........+....+
T Consensus 240 -----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~y-----~~p~--~~g~~~ig~~~~~~~~~~~~~~ 298 (405)
T 2gag_B 240 -----------ELPIQSHPLQALVS-ELFEPVHPTVVMSNHIH--VY-----VSQA--HKGELVMGAGIDSYNGYGQRGA 298 (405)
T ss_dssp -----------CCCEEEEEEEEEEE-EEBCSCCCSEEEETTTT--EE-----EEEC--TTSEEEEEEEECSSCCCSSCCC
T ss_pred -----------CCCccccceeEEEe-cCCccccCceEEeCCCc--EE-----EEEc--CCCcEEEEeccCCCCccccCCC
Confidence 01101111111222 22211111122211100 00 0110 1221122222221122323344
Q ss_pred HHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCCCCCCeEEeeccccCCCCCchhHHH
Q 022185 190 SEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAV 269 (301)
Q Consensus 190 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~ 269 (301)
++..+.+++.+.+++|.+.. ..+...+ .+.+...++..+.. -..|.+|+|++.-+.+. |+..|.
T Consensus 299 ~~~~~~l~~~~~~~~p~l~~-----~~~~~~w-----~g~~~~t~d~~p~i--g~~~~~~l~~~~G~~g~----G~~~a~ 362 (405)
T 2gag_B 299 FHVIQEQMAAAVELFPIFAR-----AHVLRTW-----GGIVDTTMDASPII--SKTPIQNLYVNCGWGTG----GFKGTP 362 (405)
T ss_dssp THHHHHHHHHHHHHCGGGGG-----CEECEEE-----EEEEEEETTSCCEE--EECSSBTEEEEECCGGG----CSTTHH
T ss_pred HHHHHHHHHHHHHhCCcccc-----CCcceEE-----eeccccCCCCCCEe--cccCCCCEEEEecCCCc----hhhHHH
Confidence 56778889999999997642 1222111 11122233322111 01225789988644433 567778
Q ss_pred HHHHHHHHHHHHH
Q 022185 270 LSGKLCAQAIVQD 282 (301)
Q Consensus 270 ~SG~~aA~~i~~~ 282 (301)
..|+.+|+.|...
T Consensus 363 ~~g~~la~~i~g~ 375 (405)
T 2gag_B 363 GAGFTLAHTIAND 375 (405)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCC
Confidence 8899999998864
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.09 E-value=0.00012 Score=66.45 Aligned_cols=68 Identities=12% Similarity=0.166 Sum_probs=55.2
Q ss_pred eEeeecC-CC--cccchHHHHHHHHHcCcEEEecc---eeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 33 KMAFLDG-NP--PERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 33 ~~~~~~G-G~--~~~l~~~l~~~l~~~g~~I~l~~---~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.++.+.+ |. ...++..|.+.++++|++|++++ +|++|..+ ++++++|++.+|++++||.||+|+....
T Consensus 148 g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 148 GYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp EEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred EEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 3444444 32 24788999999999999999999 99999984 5567779998888899999999998864
No 37
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.07 E-value=8.6e-05 Score=65.90 Aligned_cols=208 Identities=14% Similarity=0.136 Sum_probs=111.2
Q ss_pred eEeeecCCC--cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCchh
Q 022185 33 KMAFLDGNP--PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 110 (301)
Q Consensus 33 ~~~~~~GG~--~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~ 110 (301)
.++++.+|. ...+.+.|.+.+++.|++|+++++|++|..+ ++.+ .|++.+| +++||.||+|+..... .+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~~- 226 (382)
T 1ryi_A 152 ASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG-MFFKQL- 226 (382)
T ss_dssp EEEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH-HHHHHT-
T ss_pred EEEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH-HHHHhc-
Confidence 344555553 2458888999998899999999999999985 4456 5877666 7999999999987432 111110
Q ss_pred hhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecCccchhhhhcccccccccCCCCcEEEEEecC-CCccCCCCh
Q 022185 111 KEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP-AEEWISCSD 189 (301)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~-~~~~~~~~~ 189 (301)
. ..+...+.....+.++.+.. .....++... . + . .|...+.+.+-... ...+....+
T Consensus 227 -~-------~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~--~--~-----~----~p~~~g~~~vG~~~~~~~~~~~~~ 284 (382)
T 1ryi_A 227 -G-------LNNAFLPVKGECLSVWNDDI-PLTKTLYHDH--C--Y-----I----VPRKSGRLVVGATMKPGDWSETPD 284 (382)
T ss_dssp -T-------CCCCCEEEEEEEEEEECCSS-CCCSEEEETT--E--E-----E----EECTTSEEEEECCCEETCCCCSCC
T ss_pred -C-------CCCceeccceEEEEECCCCC-CccceEEcCC--E--E-----E----EEcCCCeEEEeecccccCCCCCCC
Confidence 0 00111122222233332211 1112222210 0 0 0 11111221111111 122333455
Q ss_pred HHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCCCCCCeEEeeccccCCCCCchhHHH
Q 022185 190 SEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAV 269 (301)
Q Consensus 190 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~ 269 (301)
++..+.+++.+.+++|.+.. ..+...+. +.+...++..+.. ......+|+|+++.+.+ .|+..|.
T Consensus 285 ~~~~~~l~~~~~~~~p~l~~-----~~~~~~w~-----g~~~~t~d~~p~i-g~~~~~~~l~~~~G~~g----~G~~~a~ 349 (382)
T 1ryi_A 285 LGGLESVMKKAKTMLPAIQN-----MKVDRFWA-----GLRPGTKDGKPYI-GRHPEDSRILFAAGHFR----NGILLAP 349 (382)
T ss_dssp HHHHHHHHHHHHHHCGGGGG-----SEEEEEEE-----EEEEECSSSCCEE-EEETTEEEEEEEECCSS----CTTTTHH
T ss_pred HHHHHHHHHHHHHhCCCcCC-----CceeeEEE-----EecccCCCCCcEe-ccCCCcCCEEEEEcCCc----chHHHhH
Confidence 67788999999999998642 12222111 1112233321110 00112468999875543 3678888
Q ss_pred HHHHHHHHHHHHH
Q 022185 270 LSGKLCAQAIVQD 282 (301)
Q Consensus 270 ~SG~~aA~~i~~~ 282 (301)
.+|+.+|+.|...
T Consensus 350 ~~g~~la~~i~~~ 362 (382)
T 1ryi_A 350 ATGALISDLIMNK 362 (382)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCC
Confidence 9999999998764
No 38
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.01 E-value=5.7e-06 Score=61.88 Aligned_cols=103 Identities=11% Similarity=0.067 Sum_probs=52.0
Q ss_pred cEEecCEEEEccChhhHhhcC--CchhhhcHHHHHHhhcCCcCeEEEEEEecccCCCccceeeeecCccchhhhhccccc
Q 022185 86 NVIDGDAYVFATPVDILKLQL--PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTC 163 (301)
Q Consensus 86 ~~~~ad~VI~a~p~~~l~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 163 (301)
++++||+||+|+|+.+++++. |+ +|..+.++++++.|....|+++.|+++||..-+. .+ +.+.
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~--LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~----------~g-d~s~-- 68 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPP--FSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEA----------DW-KREL-- 68 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESC--CCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHH----------HH-HHHH--
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCC--CCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCc----------cc-cccC--
Confidence 468999999999999998763 43 3567788899999999999999999999963110 00 1110
Q ss_pred ccccCCCCcEEEEEe--c-CCCccCCCChHHHHHHHHHHHHHhCCCC
Q 022185 164 KEYYNPNQSMLELVF--A-PAEEWISCSDSEIIDATMKELAKLFPDE 207 (301)
Q Consensus 164 ~~~~~~g~~~l~~~~--~-~~~~~~~~~~~~~~~~~~~~l~~~~p~~ 207 (301)
.+...+++..+. . .+..|..+++ +..+.+++.|.++||+.
T Consensus 69 ---~~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 69 ---DAIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp ---HHHSTTHHHHHHHHCCCSCCCC----------------------
T ss_pred ---CCCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 011112221111 1 1345666655 66788899999999975
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.99 E-value=0.0013 Score=58.29 Aligned_cols=202 Identities=13% Similarity=0.129 Sum_probs=107.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh--HhhcCCchhhhcHHHHHHh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI--LKLQLPENWKEMAYFKRLE 120 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~--l~~l~~~~~~~~~~~~~~~ 120 (301)
..+...|.+.+++.|++|+++++|++|+.+ ++++.+|++.+| +++||.||+|+.... +.+.+....
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~---------- 216 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKT---------- 216 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCS----------
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCc----------
Confidence 467888899998899999999999999985 555766888777 799999999998753 211111000
Q ss_pred hcCCcCeEEEEEEecccCCCccc-eeeeecCccchhhhhcccccccccCCCCcEEEEE--ecCCCccCCCChHHHHHHHH
Q 022185 121 KLVGVPVINIHIWFDRKLKNTYD-HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELV--FAPAEEWISCSDSEIIDATM 197 (301)
Q Consensus 121 ~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~--~~~~~~~~~~~~~~~~~~~~ 197 (301)
.+...+.-...+.++ +...... ..+++... ...+ . .|...+++... ......+....+++..+.++
T Consensus 217 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~-~~~y-----~----~p~~~g~~iG~~~~~~~~~~~~~~~~~~~~~l~ 285 (382)
T 1y56_B 217 KIPIEPYKHQAVITQ-PIKRGTINPMVISFKY-GHAY-----L----TQTFHGGIIGGIGYEIGPTYDLTPTYEFLREVS 285 (382)
T ss_dssp CCCCEEEEEEEEEEC-CCSTTSSCSEEEESTT-TTEE-----E----ECCSSSCCEEECSCCBSSCCCCCCCHHHHHHHH
T ss_pred CcCCCeeEeEEEEEc-cCCcccCCCeEEecCC-CeEE-----E----EEeCCeEEEecCCCCCCCCCCCCCCHHHHHHHH
Confidence 011111111222232 2111011 22222110 0000 0 11111221111 11111233334567788899
Q ss_pred HHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHH
Q 022185 198 KELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQ 277 (301)
Q Consensus 198 ~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~ 277 (301)
+.+.+++|.+.. .++...+ .+.+...++..+.. ......+|+|++.-+.+ .|+..|...|+.+|+
T Consensus 286 ~~~~~~~p~l~~-----~~~~~~~-----~g~r~~t~d~~p~i-g~~~~~~~~~~~~G~~g----~G~~~a~~~g~~la~ 350 (382)
T 1y56_B 286 YYFTKIIPALKN-----LLILRTW-----AGYYAKTPDSNPAI-GRIEELNDYYIAAGFSG----HGFMMAPAVGEMVAE 350 (382)
T ss_dssp HHHHHHCGGGGG-----SEEEEEE-----EEEEEECTTSCCEE-EEESSSBTEEEEECCTT----CHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcCC-----CCceEEE-----EeccccCCCCCcEe-ccCCCCCCEEEEEecCc----chHhhhHHHHHHHHH
Confidence 999999998642 2332211 12222233322111 00112578998863333 478888899999999
Q ss_pred HHHHH
Q 022185 278 AIVQD 282 (301)
Q Consensus 278 ~i~~~ 282 (301)
.|...
T Consensus 351 ~i~~~ 355 (382)
T 1y56_B 351 LITKG 355 (382)
T ss_dssp HHHHS
T ss_pred HHhCC
Confidence 99875
No 40
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.92 E-value=0.0012 Score=63.30 Aligned_cols=67 Identities=16% Similarity=0.204 Sum_probs=53.2
Q ss_pred eEeeecCCC--cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 33 KMAFLDGNP--PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 33 ~~~~~~GG~--~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
..+++.+|. ...++..|.+.+++.|++|+++++|++|..+ ++.+ .|++.+|++++||.||+|+....
T Consensus 405 g~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 405 GITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred cEEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCeE-EEEECCCCEEECCEEEECCCcch
Confidence 345555552 2578889999998899999999999999985 4445 58887877899999999998763
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.84 E-value=0.0019 Score=62.10 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=52.0
Q ss_pred eEeeecCCC--cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCc-EEecCEEEEccChh
Q 022185 33 KMAFLDGNP--PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVD 100 (301)
Q Consensus 33 ~~~~~~GG~--~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~-~~~ad~VI~a~p~~ 100 (301)
.++++.+|. ...++.+|.+.+++.|++|+++++|++|..+++ .+ .|++.+|+ +++||.||+|+...
T Consensus 400 g~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v-~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 400 GIHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDS-QW-QLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSS-SE-EEEEC-CCCCEEESEEEECCGGG
T ss_pred eEEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC-eE-EEEeCCCcEEEECCEEEECCCcc
Confidence 345555552 257888999999889999999999999999544 46 48887876 79999999999886
No 42
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.81 E-value=0.00026 Score=62.15 Aligned_cols=58 Identities=10% Similarity=0.138 Sum_probs=48.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC--cEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~~~ 101 (301)
..+.+.|.+.++++|++|+++++|++|+.++++.+ .|++.+| .+++||.||+|+....
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 46888999999999999999999999999655535 4888777 4799999999998753
No 43
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.60 E-value=0.0021 Score=58.56 Aligned_cols=57 Identities=21% Similarity=0.133 Sum_probs=45.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CCc--EEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 101 (301)
.+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++. +|+ +++||.||.|.....
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 46677888887889999999999999985 5556556654 665 789999999987744
No 44
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.44 E-value=0.011 Score=48.66 Aligned_cols=88 Identities=19% Similarity=0.187 Sum_probs=52.3
Q ss_pred CCChHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCCCCCCeEEeeccccCCCCCch
Q 022185 186 SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASM 265 (301)
Q Consensus 186 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~l~~aGd~~~~~~~~~v 265 (301)
........+.....+...+..... .+......+|.++... .+.. .+...+..+|||+|||++.. +++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~w~~a~~~-~~~~---~~~~~~~~~~v~l~GDa~~g---~gv 309 (336)
T 3kkj_A 243 DASREQVIEHLHGAFAELIDCTMP------APVFSLAHRWLYARPA-GAHE---WGALSDADLGIYVCGDWCLS---GRV 309 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSCCC------CCSEEEEEEEEEEEES-SCCC---CSSEEETTTTEEECCGGGTT---SSH
T ss_pred cccchhhhhhhhhhhhhhccCCcC------cchheeccceeecccc-cccC---ccceeeCCCCEEEEecccCC---cCH
Confidence 445566666777777776643221 1112222333222211 1110 11122345799999999865 589
Q ss_pred hHHHHHHHHHHHHHHHHhhhh
Q 022185 266 EGAVLSGKLCAQAIVQDYVLL 286 (301)
Q Consensus 266 ~gA~~SG~~aA~~i~~~~~~~ 286 (301)
++|+.||+.+|++|++.+.+.
T Consensus 310 ~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 310 EGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999988654
No 45
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.22 E-value=0.012 Score=54.56 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=44.7
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCC---cEEEEEEeCC---cEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG---TVKNFLLTNG---NVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g---~v~~V~~~~g---~~~~ad~VI~a~p~~ 100 (301)
.+...|.+.+++.|++|+++++|++|+.++++ .|+ |++.++ ++++||.||.|....
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVT-ARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEE-EEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEE-EEEEcCCCeEEEEeCEEEECCCCc
Confidence 56777888888889999999999999996552 353 666665 678999999998774
No 46
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.19 E-value=0.018 Score=50.91 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.|.+.+++.|++|+++++|++|+.+ ++.+.+|++. ++++++||.||.|....
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 45677888888889999999999999985 5666667763 44679999999998764
No 47
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.13 E-value=0.023 Score=49.97 Aligned_cols=55 Identities=13% Similarity=0.139 Sum_probs=41.0
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe-CC--cEEecCEEEEccChh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVD 100 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~~ 100 (301)
+-..|.+..++.|++++++++|+.+..+ ++++.++... +| .+++||.||-|-...
T Consensus 104 ~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 104 FDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCccc
Confidence 4456777777789999999999999985 5556555443 34 357899999987764
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.05 E-value=0.0016 Score=58.62 Aligned_cols=56 Identities=20% Similarity=0.254 Sum_probs=48.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.++++|++|+++++|++|+.+ ++++.+|++.+|++++||.||+++..
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEESSSCEEECSEEEECSCC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 456677888888899999999999999984 56677789989999999999999875
No 49
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.99 E-value=0.00076 Score=59.52 Aligned_cols=66 Identities=18% Similarity=0.089 Sum_probs=51.9
Q ss_pred eEeeecCCC--cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 33 KMAFLDGNP--PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 33 ~~~~~~GG~--~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.++++.+|. ...++..|.+.++++|++|+++++|++|..+ ++.+ +|++.+| +++||.||+|+....
T Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~~-~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 142 ATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGAW-EVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTEE-EEECSSE-EEEESEEEECCGGGH
T ss_pred EEEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCeE-EEEeCCC-EEEcCEEEECCChhH
Confidence 344555542 2578889999999999999999999999985 4444 5888777 799999999998754
No 50
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.99 E-value=0.0014 Score=59.56 Aligned_cols=66 Identities=24% Similarity=0.420 Sum_probs=52.8
Q ss_pred EeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 34 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 34 ~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..++..+-...+++.|.+.+++.|++|+++++|++|..+ ++++.+|++.+|++++||.||+|+...
T Consensus 125 ~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 125 RMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGK 190 (447)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCS
T ss_pred EEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCC
Confidence 345533224688999999999999999999999999984 555567888888779999999998653
No 51
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.98 E-value=0.0013 Score=58.84 Aligned_cols=53 Identities=23% Similarity=0.327 Sum_probs=42.1
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.|.+.+++ ++|+++++|++|+.+++ .+. |++.+|++++||.||.|....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v~-v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDAD-GVT-VWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETT-EEE-EEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCC-cEE-EEEcCCCEEeeCEEEECCCcC
Confidence 355666777654 89999999999998644 464 888899899999999998764
No 52
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.93 E-value=0.0016 Score=58.31 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=48.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.++++|++|+++++|++|+.+ ++++.+|++.+|++++||.||+++..
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 456777888888899999999999999984 55677788989999999999999876
No 53
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.87 E-value=0.0023 Score=59.21 Aligned_cols=56 Identities=29% Similarity=0.431 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC-Cc--EEecC-EEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-GN--VIDGD-AYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~-g~--~~~ad-~VI~a~p~ 99 (301)
.+++.|.+.+++.|++|+++++|++|..+++|+|++|++.+ |+ +++|| .||+++..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 78999999999999999999999999996568888887764 33 58996 99998865
No 54
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.87 E-value=0.0018 Score=60.41 Aligned_cols=58 Identities=28% Similarity=0.480 Sum_probs=50.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
..+.+.|.+.+++.|++|+++++|++|... ++++.+|++.+|++++||.||+++....
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 467888999998899999999999999984 5567778998898899999999987643
No 55
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.71 E-value=0.0037 Score=58.72 Aligned_cols=57 Identities=23% Similarity=0.313 Sum_probs=48.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe--CCc--EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 99 (301)
..+.+.|.+.+++.|++|+++++|++|..+++|+|.+|++. +|+ ++.||.||+++..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 46888999999889999999999999998544778778765 565 6899999999875
No 56
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.62 E-value=0.0038 Score=54.91 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.++..|.+.+++.|++|+++++|++|+.+++ .+ .|++.+| +++||.||+|+....
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-~~-~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD-GV-TIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSS-SE-EEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCC-EE-EEEECCC-eEEcCEEEEcCCccH
Confidence 6888999999889999999999999998544 45 3777777 599999999998764
No 57
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.52 E-value=0.0044 Score=58.15 Aligned_cols=57 Identities=28% Similarity=0.348 Sum_probs=47.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe--CCc--EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 99 (301)
..+++.|.+.+++.|++|+++++|++|..+++|+|.+|++. +|+ +++||.||+++..
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 46889999999889999999999999998543778778775 675 5899999999875
No 58
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.51 E-value=0.006 Score=57.33 Aligned_cols=57 Identities=30% Similarity=0.391 Sum_probs=46.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe--CCc--EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 99 (301)
..+++.|.+.+++.|++|+++++|++|..+++|+|.+|++. +|+ ++.||.||+++..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 46888999999999999999999999998532778778775 564 5899999999874
No 59
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.46 E-value=0.33 Score=46.09 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=45.1
Q ss_pred cchHHHHHHHHHcCc--EEEecceeeEEEecCC--C-cEEEEEEe------CC--cEEecCEEEEccChhh-HhhcC
Q 022185 44 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--G-TVKNFLLT------NG--NVIDGDAYVFATPVDI-LKLQL 106 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~--~I~l~~~V~~I~~~~~--g-~v~~V~~~------~g--~~~~ad~VI~a~p~~~-l~~l~ 106 (301)
.+.+.|.+.+++.|+ +|+++++|++|+.+++ + .|. |++. +| ++++||+||.|....- +.+.+
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~-v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 217 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT-VTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAI 217 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE-EEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEE-EEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHh
Confidence 456678888888887 9999999999998643 1 343 6554 45 5689999999987743 34444
No 60
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.42 E-value=0.0044 Score=56.15 Aligned_cols=58 Identities=22% Similarity=0.261 Sum_probs=47.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEec--------------CCCcEEEEEEeCCcEE--ecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~--------------~~g~v~~V~~~~g~~~--~ad~VI~a~p~~~ 101 (301)
..+.+.|.+.++++|++|+++++|++|..+ +++++.+|++.+| ++ +||.||+|+....
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 378889999999999999999999999972 2445656888777 68 9999999998754
No 61
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.42 E-value=0.0048 Score=55.63 Aligned_cols=63 Identities=16% Similarity=0.300 Sum_probs=50.8
Q ss_pred EeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 34 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 34 ~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..++... ...+.+.|.+.+++.|++|+++++|++|..+++ .+ .|++.+| +++||.||+|+...
T Consensus 124 ~~~~~~~-~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-~~-~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 124 QLFCDHS-AKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-GF-RVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp EEEESSC-HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EE-EEEETTE-EEEESEEEECCCCS
T ss_pred EEeeCCC-HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EE-EEEECCc-EEEeeEEEECCCCc
Confidence 3445444 468999999999999999999999999998544 35 4788777 89999999998764
No 62
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.36 E-value=0.0042 Score=55.13 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=39.5
Q ss_pred CceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEcc
Q 022185 31 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFAT 97 (301)
Q Consensus 31 ~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~ 97 (301)
+...+.+.||+ ++|+++|++.| +.+|+++++|++|.++++|+. |...+........|++.+
T Consensus 309 ~~~~~~i~GG~-~~l~~~l~~~l---~~~i~l~~~V~~I~~~~~gv~--v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 309 RATYWEIEGGS-RMLPETLAKDL---RDQIVMGQRMVRLEYYDPGRD--GHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp TCCEEEETTCT-THHHHHHHHHG---GGTEECSEEEEEEEECCCC---------------CCEEEEE
T ss_pred CCceEEECCcH-HHHHHHHHHhc---CCcEEecCeEEEEEECCCceE--EEeCCCcCCCCCeeEEEe
Confidence 45677789995 99999999988 578999999999999777732 333232234455566543
No 63
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.35 E-value=0.0054 Score=55.06 Aligned_cols=54 Identities=15% Similarity=0.222 Sum_probs=45.1
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.++++|++|+++++|++|+.+ + ++.+|++.+|++++||.||+++..
T Consensus 186 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 186 RIGAWLRGLLTELGVQVELGTGVVGFSGE-G-QLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEECS-S-SCCEEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEecc-C-cEEEEEECCCCEEEcCEEEEeeCC
Confidence 34566778888899999999999999973 3 455688889999999999999876
No 64
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.34 E-value=0.0093 Score=53.91 Aligned_cols=57 Identities=16% Similarity=0.221 Sum_probs=46.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEec-CCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~-~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.. +++++..|++.+|+++++|.||+++..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 345667788888899999999999999862 245576688888988999999999875
No 65
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.32 E-value=0.0097 Score=54.40 Aligned_cols=55 Identities=20% Similarity=0.317 Sum_probs=46.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+. +++++. |++.+|+++++|.||+++..
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~-v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVA-RVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEE-EEEESSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEE-EEEeCCCEEEcCEEEECCCC
Confidence 45667888889899999999999999998 355565 77788889999999999876
No 66
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.30 E-value=0.0092 Score=54.91 Aligned_cols=55 Identities=25% Similarity=0.332 Sum_probs=46.0
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.++++|++|+++++|++|+.++++.+ .|++.+|+++++|.||+++..
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECCCcEEEcCEEEEccCC
Confidence 4577788889899999999999999998544444 478888888999999999875
No 67
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.29 E-value=0.01 Score=54.69 Aligned_cols=55 Identities=22% Similarity=0.344 Sum_probs=45.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.|+++|++|+++++|++|+.++++.+ .|++.+|+++++|.||+++..
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSK-HVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceE-EEEECCCcEEEcCEEEECCCC
Confidence 4577788889899999999999999998544434 478888888999999999875
No 68
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.20 E-value=0.0092 Score=55.40 Aligned_cols=57 Identities=21% Similarity=0.275 Sum_probs=46.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcE--EEEEEeCCc-EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v--~~V~~~~g~-~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.++++++ ..|++.+|+ +++||.||+++..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 34567888899999999999999999998545543 247777787 7999999999875
No 69
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.20 E-value=0.012 Score=54.94 Aligned_cols=57 Identities=16% Similarity=0.216 Sum_probs=48.1
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~-g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.+.+.|.+.+++. |++|+++ +|++|..++++.+.+|++.+|++++||.||.|....-
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 5778888888888 9999999 9999998656666678888888899999999988744
No 70
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.0099 Score=54.48 Aligned_cols=57 Identities=19% Similarity=0.217 Sum_probs=45.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC-cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g-~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|++.|++|+++++|++|+.++++++..|++.+| +++++|.||+++..
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 3466778888888999999999999999754442335788888 78999999999875
No 71
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.15 E-value=0.015 Score=53.74 Aligned_cols=58 Identities=17% Similarity=0.184 Sum_probs=48.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
..+.+.|.+.+++.|++++.+ +|++|..++++.+.+|++.+|++++||.||.|.....
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 356777888888889999999 9999998656666678888888899999999988754
No 72
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.14 E-value=0.0079 Score=59.10 Aligned_cols=66 Identities=21% Similarity=0.201 Sum_probs=52.0
Q ss_pred EeeecCCC--cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 34 MAFLDGNP--PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 34 ~~~~~GG~--~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
++++.+|. ...++..|.+.++++|++|+++++|++|+.+ ++++.+|++.+| +++||.||+|+....
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 34444442 2368899999999999999999999999984 455666888676 799999999998764
No 73
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.13 E-value=0.0084 Score=56.19 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=52.5
Q ss_pred eEeeecCCC-cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC---C--cEEecCEEEEccChhh
Q 022185 33 KMAFLDGNP-PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 101 (301)
Q Consensus 33 ~~~~~~GG~-~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~~ 101 (301)
.+.|++|-+ ..++...|.+.++++|++|+++++|++|..+ ++++.+|++.+ | .+++||.||.|+.+..
T Consensus 159 g~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 159 GGIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred EEEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 344554432 3578889999998999999999999999985 56676787764 3 4689999999998754
No 74
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.11 E-value=0.012 Score=53.44 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=45.8
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|++|+++++|++|+.++++.+ .|++.+|+++++|.||+++..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL-TLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEE-EEEECCCcEEEcCEEEECCCC
Confidence 4667788889889999999999999998544434 478888888999999999865
No 75
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.10 E-value=0.0085 Score=49.24 Aligned_cols=55 Identities=13% Similarity=0.039 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~-g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.|.+.+++. |++++ +++|++|..+ ++++.+|++.+|++++||.||.++...
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCC
Confidence 5667777888776 88998 6799999985 455666888888789999999998773
No 76
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.09 E-value=0.01 Score=52.46 Aligned_cols=56 Identities=21% Similarity=0.258 Sum_probs=46.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
..++..|.+.++++|++|+++++|++|+.++++ +. |++.+| +++||.||+|+....
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~-v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-VK-IETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-EE-EEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-EE-EEeCCC-EEEeCEEEEecCccH
Confidence 467888999998899999999999999985443 53 777555 799999999998754
No 77
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.07 E-value=0.015 Score=45.51 Aligned_cols=53 Identities=21% Similarity=0.228 Sum_probs=43.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++++++ +|++|+.++++ + .|++.+| ++++|.||+++..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~-~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-F-EVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-E-EEECSSC-EEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-E-EEEECCC-EEEECEEEECCCC
Confidence 456778888888899999999 99999985443 4 3777777 8999999999876
No 78
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.05 E-value=0.012 Score=53.95 Aligned_cols=55 Identities=22% Similarity=0.271 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.+ ++.+ .|++.+|+++++|.||+++..
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-NVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-EEEECCCcEEEcCEEEEeeCC
Confidence 346778888898899999999999999985 4446 488888888999999999986
No 79
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.05 E-value=0.011 Score=52.47 Aligned_cols=55 Identities=15% Similarity=0.137 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+...|.+.+++.|++|+++++|++|+.+ ++.+. |++.+| +++||.||+|+...
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v~-v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPD-ADGVS-VTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEEE-EEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeEE-EEECCC-EEEcCEEEEcCCcC
Confidence 367888889888899999999999999985 44454 776555 79999999999864
No 80
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.03 E-value=0.013 Score=53.52 Aligned_cols=55 Identities=15% Similarity=0.198 Sum_probs=46.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEE-EeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~-~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.++++|++|+++++|++|+.++++.+ .|+ +.+|+ +++|.||+++..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR-VATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE-EEEESSSCE-EEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE-EEEEcCCCe-EEeCEEEEeeCc
Confidence 45578888899999999999999999998655544 488 88887 999999999876
No 81
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.02 E-value=0.019 Score=49.09 Aligned_cols=55 Identities=11% Similarity=0.103 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC----C--cEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~----g--~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|++|+++++|++|..+ ++++.+|++.+ | +++++|.||++++.
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 45667777888899999999999999984 44566677654 4 57899999999765
No 82
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.01 E-value=0.012 Score=52.09 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=45.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.+ ++.+ .|++.+|+++++|.||+++..
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA-GEGL-EAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec-CCEE-EEEECCCCEEECCEEEECcCC
Confidence 345678888898899999999999999974 3334 477888888999999999875
No 83
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.00 E-value=0.014 Score=53.78 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=45.6
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.+.+.++++|++|+++++|++|+.+ ++.+ .|++.+|+++++|.||+++...
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECCCcEEEcCEEEECCCCC
Confidence 46678888998999999999999999985 3345 3777788889999999998764
No 84
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.92 E-value=0.014 Score=53.04 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=45.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.+++.|++|+++++|++|+.. ++++..|.+ +|+++++|.||+++...
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 456678888898999999999999999963 455654555 77889999999999753
No 85
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.91 E-value=0.018 Score=53.04 Aligned_cols=56 Identities=13% Similarity=0.153 Sum_probs=46.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcE-EecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~-~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|+++|++|+++++|++|+.++++.+ .|++.+|++ +++|.||+++..
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNL-SIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCE-EEEETTSCEEEEESEEEECCCB
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceE-EEEECCCcEEEECCEEEECCCC
Confidence 35667788899999999999999999997544544 477778887 899999999875
No 86
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.87 E-value=0.012 Score=52.61 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=45.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCc--EEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~--~~~ad~VI~a~p~~ 100 (301)
.+...|.+.+++.|++|+.+++|++|+.++++.+..|++.+|+ +++||.||.|....
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 4567788888888999999999999998655543446667787 68999999998764
No 87
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.84 E-value=0.02 Score=51.97 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=45.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.+++.|++|+++++|++|+.. ++++ .|++.+| ++++|.||+++...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCB
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCC
Confidence 456678888898899999999999999974 4556 5777666 89999999998763
No 88
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.83 E-value=0.02 Score=53.94 Aligned_cols=58 Identities=17% Similarity=0.095 Sum_probs=47.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE---eCCc--EEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~ 100 (301)
..+++.|.+.+++.|++|+++++|++|..+++|++.+|.+ .+|+ ++.|+.||+++...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 3578889998888999999999999999853667777775 3564 58899999999763
No 89
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.79 E-value=0.023 Score=53.44 Aligned_cols=57 Identities=25% Similarity=0.330 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC------C---------cEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------G---------NVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~------g---------~~~~ad~VI~a~p~~ 100 (301)
.+...|.+.+++.|++|+++++|++|..+++|+|.+|++.+ | .+++||.||.|....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 45677888888889999999999999986667777787752 3 579999999998874
No 90
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.78 E-value=0.016 Score=51.83 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=49.1
Q ss_pred eeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecC---CCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 35 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 35 ~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~---~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.|+... ...+.+.|.+.+++.|++|+++++|++|..++ ++.+ .|++.+| +++||.||+|+...
T Consensus 102 ~~p~~~-~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVlAtG~~ 167 (401)
T 2gqf_A 102 LFCDEG-AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIVATGGL 167 (401)
T ss_dssp EEETTC-THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEECCCCS
T ss_pred EccCCC-HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEECCCCc
Confidence 345434 47889999999999999999999999999741 3445 4777666 79999999998653
No 91
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.70 E-value=0.017 Score=53.20 Aligned_cols=54 Identities=24% Similarity=0.290 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.++++|++|+++++|++|+.+ ++.+ .|++.+|++++||.||+++..
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCC
Confidence 45667778888899999999999999874 4445 488888989999999999875
No 92
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.70 E-value=0.014 Score=51.91 Aligned_cols=62 Identities=18% Similarity=0.258 Sum_probs=48.3
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCcEE-EEEEeCCcEEecCEEEEccChhh-HhhcC
Q 022185 44 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVDI-LKLQL 106 (301)
Q Consensus 44 ~l~~~l~~~l~~~-g~~I~l~~~V~~I~~~~~g~v~-~V~~~~g~~~~ad~VI~a~p~~~-l~~l~ 106 (301)
.+.+.|.+.+++. |++|+++++|++|+.++++ ++ .|++.+|++++||.||.|....- +.+.+
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCChHHHHHh
Confidence 5677788888777 8999999999999986444 52 37888888899999999987643 34444
No 93
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=95.66 E-value=0.028 Score=52.21 Aligned_cols=58 Identities=16% Similarity=0.255 Sum_probs=47.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
..+.+.|.+.+++.|++++.+ +|++|..++++.+..|++.+|++++||.||.+.....
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 356778888888889999999 8999998656665568888888899999999988744
No 94
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.58 E-value=0.021 Score=51.87 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=45.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.++++|++|+++++|++|+.+ ++.+ .|++.+|+++++|.||+++...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPE-AKGA-RVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCEE-EEEECCCeEEEcCEEEECcCCC
Confidence 456778888898899999999999999975 3334 3666678889999999998763
No 95
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=95.49 E-value=0.026 Score=52.92 Aligned_cols=58 Identities=7% Similarity=0.042 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CCc--EEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 101 (301)
.+++..+.+.++++|++|+.+++|++|..+ ++++.+|++. +|+ +++||.||+|+.+..
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 467788888888899999999999999985 5566667754 343 689999999998764
No 96
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.35 E-value=0.039 Score=50.51 Aligned_cols=56 Identities=14% Similarity=0.102 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCc-----EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~-----~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|+++|++|+++++|++|+..+++.+. |++.+++ ++++|.||+++..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~-v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLL-VKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEE-EEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEE-EEEecCCCCceeEEEcCEEEECccc
Confidence 456677888898999999999999999985555553 6666543 6899999999875
No 97
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.35 E-value=0.05 Score=50.42 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=46.0
Q ss_pred cchHHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.+.+.|.+.+++ .|++|+.+ +|++|+.++++.+.+|++.+|++++||.||.|....-
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 456777788877 89999999 5999998656665568887877799999999988753
No 98
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.28 E-value=0.042 Score=47.18 Aligned_cols=53 Identities=8% Similarity=0.025 Sum_probs=41.6
Q ss_pred hHHHHHHHHHc-CcEEEecceeeEEEecCCCcEEEEEEeC-----CcEEecCEEEEccCh
Q 022185 46 CLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPV 99 (301)
Q Consensus 46 ~~~l~~~l~~~-g~~I~l~~~V~~I~~~~~g~v~~V~~~~-----g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+. |++|+++++|++|+.+ ++++.+|++.+ ++++++|.||++++.
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 56677777665 9999999999999985 44566677765 357899999999765
No 99
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.19 E-value=0.036 Score=50.49 Aligned_cols=55 Identities=20% Similarity=0.317 Sum_probs=45.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCc-EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~-~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.++++ + .|++.+|+ ++++|.||+++..
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQG-T-TLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-E-EEEETTCCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-E-EEEEeCCcEEEEcCEEEECCCC
Confidence 345677888888899999999999999975444 4 47888888 8999999999875
No 100
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=95.17 E-value=0.049 Score=48.20 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=47.1
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE-eCCc--EEecCEEEEccChhh-HhhcCC
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVDI-LKLQLP 107 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~~~-l~~l~~ 107 (301)
.+.+.|.+.+.+.|++|+++++|++|+.++++.+ .|++ .+|+ +++||.||.+....- +.+.++
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4567788888778999999999999998533434 3766 6886 689999999987743 344443
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=95.08 E-value=0.045 Score=51.75 Aligned_cols=55 Identities=15% Similarity=-0.000 Sum_probs=46.0
Q ss_pred cchHHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.|.+.+++ .|++| ++++|++|..+ ++++.+|++.+|+++.||.||+|+...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 467788888877 58999 68899999984 666878999889889999999999864
No 102
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.07 E-value=0.05 Score=50.78 Aligned_cols=56 Identities=20% Similarity=0.381 Sum_probs=44.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEec------------------CCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~------------------~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++++++++|++|+.+ +++++. +++.+|+++++|.||+++..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEcCCCEEEcCEEEECcCC
Confidence 345667778888899999999999999873 244453 66778888999999999864
No 103
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.04 E-value=0.054 Score=48.43 Aligned_cols=50 Identities=24% Similarity=0.288 Sum_probs=42.2
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.++++|++|+++++|++|+ + + .|++.+|+++++|.||+++..
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCC
Confidence 456677888888999999999999998 3 3 367778888999999999876
No 104
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=95.04 E-value=0.043 Score=50.55 Aligned_cols=57 Identities=21% Similarity=0.182 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CCc--EEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 101 (301)
.+++..|.+.++++|++|+++++|++|..+ + .+.+|++. +|+ +++||.||.|+.+..
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 468889999998999999999999999985 3 35567774 565 689999999998764
No 105
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.92 E-value=0.071 Score=48.59 Aligned_cols=55 Identities=16% Similarity=0.191 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC---cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g---~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|++.|++|+++++|++|+.+ ++.+. |++.++ +++++|.||+++..
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~-~~~~~-v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVK-NKQVT-VKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEEC-SSCEE-EEEESSSEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEc-CCEEE-EEEEeCCCcEEEECCEEEEeeCC
Confidence 456778888898899999999999999985 43453 666554 57899999999976
No 106
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.89 E-value=0.05 Score=47.44 Aligned_cols=57 Identities=26% Similarity=0.278 Sum_probs=45.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.+++.|.+++++++|++|+..+++.+ .|++.+|+++++|.||+++...
T Consensus 74 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 74 IDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTF-ETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceE-EEEECCCcEEEeeEEEEccCCC
Confidence 35667777778778999999999999998544445 3778788889999999998763
No 107
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.88 E-value=0.062 Score=48.98 Aligned_cols=57 Identities=18% Similarity=0.263 Sum_probs=43.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE-----eCCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-----TNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~-----~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.+++.|++|+++++|++|+.++++.+ .|++ .+|+++++|.||+++...
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 34567788888889999999999999998544424 3553 356789999999998753
No 108
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=94.87 E-value=0.13 Score=44.73 Aligned_cols=192 Identities=11% Similarity=-0.026 Sum_probs=98.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhHhhcCCchhhhcHHHHHHhhc
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKL 122 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l~~~~~~~~~~~~~~~~~ 122 (301)
..++..|.+.++++|++|+. ++|++|+.. + .++||.||+|+....- +++++.
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~--~-----------~~~a~~VV~A~G~~s~-~l~~~~------------- 193 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEV--A-----------REGADVIVNCTGVWAG-ALQRDP------------- 193 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHH--H-----------HTTCSEEEECCGGGGG-GTSCCT-------------
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHh--h-----------cCCCCEEEECCCcChH-hhcCCC-------------
Confidence 46788999999999999988 899887642 1 1579999999987653 343321
Q ss_pred CCcCeEEEEEEecccCCCccceeeeecCccchhhhhcccccccccCCCCcEEEEEecCCCccCCCChHHHHHHHHHHHHH
Q 022185 123 VGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAK 202 (301)
Q Consensus 123 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 202 (301)
...+.--..+.++.+ + ....++...+... +.... ...|....++.........+....+++..+.+++.+.+
T Consensus 194 ~l~p~rg~~~~~~~~-~--~~~~~~~~~~~~~---~~~~~--y~~p~~~~~~iGg~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (351)
T 3g3e_A 194 LLQPGRGQIMKVDAP-W--MKHFILTHDPERG---IYNSP--YIIPGTQTVTLGGIFQLGNWSELNNIQDHNTIWEGCCR 265 (351)
T ss_dssp TCEEEEEEEEEEECT-T--CCSEEEECCTTTC---TTCSC--EEEECSSCEEEECCCEETCCCCSCCHHHHHHHHHHHHH
T ss_pred ceeecCCcEEEEeCC-C--cceEEEeccccCC---CCcee--EEEeCCCcEEEeeeeecCCCCCCCCHHHHHHHHHHHHH
Confidence 111222223333322 1 1122221110000 00000 00122122221100001223334456678889999999
Q ss_pred hCCCCccccccCceEEEEEEeecCCcceecCCCCCCC-CCC-CCCC-CCCeEEeeccccCCCCCchhHHHHHHHHHHHHH
Q 022185 203 LFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC-RPL-QRSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 279 (301)
Q Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~-~~~p-~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i 279 (301)
++|.+.. ..+...+ .+.+...++ .+. .+. ...| .+|+|++.-+.+ .|+..+...|+..|+.|
T Consensus 266 ~~P~l~~-----~~i~~~w-----~G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g----~G~~~ap~~g~~la~li 330 (351)
T 3g3e_A 266 LEPTLKN-----ARIIGER-----TGFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGG----YGLTIHWGCALEAAKLF 330 (351)
T ss_dssp HCGGGGG-----CEEEEEE-----EEEEEECSS-CEEEEEEECCSSSCEEEEEEECCTT----CHHHHHHHHHHHHHHHH
T ss_pred hCCCccC-----CcEeeee-----EeeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCc----chHhhhHHHHHHHHHHH
Confidence 9998642 2333211 122222333 110 010 1122 468988864433 37888888999999998
Q ss_pred HHHhhh
Q 022185 280 VQDYVL 285 (301)
Q Consensus 280 ~~~~~~ 285 (301)
...+..
T Consensus 331 ~~~~~~ 336 (351)
T 3g3e_A 331 GRILEE 336 (351)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887653
No 109
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.86 E-value=0.049 Score=52.00 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE---eCCc--EEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~~ 101 (301)
..++..|.+.+++.|++|+.+++|++|.. ++|++.+|.+ .+|+ .+.|+.||+++....
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 36788899988889999999999999998 4677777765 3565 489999999987643
No 110
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=94.84 E-value=0.058 Score=45.62 Aligned_cols=56 Identities=9% Similarity=0.082 Sum_probs=42.9
Q ss_pred ccchHHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEe---------CC-----cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---------NG-----NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~---------~g-----~~~~ad~VI~a~p~ 99 (301)
..+...|.+.+.+ .|++|+++++|++|..+ ++++.+|++. +| .+++||.||+++..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 4566678877765 69999999999999984 5556667653 22 57899999999875
No 111
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=94.84 E-value=0.076 Score=45.39 Aligned_cols=53 Identities=17% Similarity=0.177 Sum_probs=41.1
Q ss_pred hHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CCc--EEecCEEEEccCh
Q 022185 46 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 46 ~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 99 (301)
.+.+.+.+++.|++|+++++|++|..+ ++++.+|++. +|+ ++++|.||+++..
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 356777787899999999999999974 4546567665 564 5899999998754
No 112
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=94.82 E-value=0.051 Score=47.90 Aligned_cols=53 Identities=26% Similarity=0.364 Sum_probs=44.3
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.+.+.|.+.+++.|++|+++++|++|+. ++ .|++.+|++++||.||.+....-
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccH
Confidence 4577888888888999999999999997 44 37777888899999999987643
No 113
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=94.79 E-value=0.066 Score=49.28 Aligned_cols=61 Identities=11% Similarity=-0.007 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCc---EEecCEEEEccChhh-HhhcC
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQL 106 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~---~~~ad~VI~a~p~~~-l~~l~ 106 (301)
.+.+.|.+.+++.|++|+++++|++|+.++++ |+ |++.+|+ +++||+||.+-...- +.+.+
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDH-VV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-EE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 45667777887889999999999999986554 64 7776664 789999999887643 34444
No 114
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.78 E-value=0.045 Score=51.87 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CCc--EEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 101 (301)
.++..|.+.+++.|++|+.+++|++|..+ +|+|.+|.+. +|+ .+.|+.||+|+....
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 67888888888899999999999999984 6777777763 564 589999999997643
No 115
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.77 E-value=0.056 Score=49.59 Aligned_cols=54 Identities=17% Similarity=0.288 Sum_probs=43.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+. ++++..|++ +|+++++|.||+++..
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 34556788888889999999999999986 344544666 7778999999999875
No 116
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.65 E-value=0.016 Score=51.77 Aligned_cols=56 Identities=14% Similarity=0.186 Sum_probs=42.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceee---------EEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~---------~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
..+...|.+.+++.|++|+++++|+ +|..+ ++++ +|++.+| +++||.||+|+....
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 3588889999988999999999999 88874 4445 5777666 799999999998753
No 117
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.65 E-value=0.085 Score=47.98 Aligned_cols=54 Identities=15% Similarity=0.184 Sum_probs=41.8
Q ss_pred cchHHHHHHH-HHcCcEEEecceeeEEEecCCCcEEEEEEe--CC--cEEecCEEEEccCh
Q 022185 44 RLCLPIVEHI-QSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l-~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+ +++|++|+++++|++|+.+++ .+ .|++. +| +++++|.||+++..
T Consensus 216 ~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~-~~-~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 216 DVTNALVGALAKNEKMKFMTSTKVVGGTNNGD-SV-SLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCEEEEEEECSS-SE-EEEEECC---EEEEEESEEEECSCE
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCC-eE-EEEEEcCCCceEEEECCEEEECCCc
Confidence 4567788888 899999999999999998533 34 36655 66 57899999999875
No 118
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=94.62 E-value=0.057 Score=51.21 Aligned_cols=56 Identities=9% Similarity=0.081 Sum_probs=46.0
Q ss_pred cchHHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.+...|.+.+++ .|++| ++++|++|..+ +++|.+|++.+|++++||.||+|+....
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 466778888877 58999 68899999984 5667789888888899999999998743
No 119
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=94.61 E-value=0.074 Score=48.38 Aligned_cols=55 Identities=15% Similarity=0.133 Sum_probs=43.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe-C--Cc--EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~-~--g~--~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.+ ++.+ .|++. + |+ ++++|.||+++..
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKK-KDGL-HVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTEE-EEEEEETTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEe-CCEE-EEEEeecCCCceeEEEcCEEEECCCc
Confidence 345667788888899999999999999974 3334 36665 6 76 7999999999865
No 120
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.61 E-value=0.078 Score=48.71 Aligned_cols=62 Identities=21% Similarity=0.267 Sum_probs=46.7
Q ss_pred CceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 31 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 31 ~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.....+.||. ..++ +.++++|++|++++.|++|..+ +++..|++.+|+++++|.||+++..
T Consensus 250 ~~~vvViGgG~--~gle---~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 250 GRKVAVTGSKA--DEVI---QELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp CSEEEEESTTH--HHHH---HHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCE
T ss_pred CCEEEEECCCH--HHHH---HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCc
Confidence 44556665663 3333 6677789999999999999863 3355577778888999999999876
No 121
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.58 E-value=0.067 Score=49.27 Aligned_cols=61 Identities=11% Similarity=0.096 Sum_probs=46.0
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCc---EEecCEEEEccChhh-HhhcC
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQL 106 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~---~~~ad~VI~a~p~~~-l~~l~ 106 (301)
.+.+.|.+.+++.|++|+++++|++|+.++++ |+ |++.+|+ +++||+||.+-...- +.+.+
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAG-VT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-EE-EEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-EE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 45667777787889999999999999986544 64 7776664 789999999887643 34444
No 122
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.56 E-value=0.078 Score=48.37 Aligned_cols=56 Identities=14% Similarity=0.281 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe-----CCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-----NGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~-----~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|++|+++++|++|...+++....|++. +|+++++|.||+++..
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 4667888889899999999999999986212223346665 3467899999999875
No 123
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.55 E-value=0.041 Score=49.10 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=43.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++++++++|++|+. ++ |++.+|+++++|.||++++.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCCCEEeeeEEEECCCC
Confidence 45677888889899999999999999975 32 66778889999999999875
No 124
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=94.51 E-value=0.07 Score=49.22 Aligned_cols=57 Identities=14% Similarity=0.092 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe--CCc--EEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~~~ 101 (301)
.+.+.|.+.+++.|++|+++++|++|..+ ++++.+|++. +|+ +++||.||.+....-
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 45677888888899999999999999985 5556556554 574 789999999988743
No 125
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.47 E-value=0.052 Score=51.00 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=43.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.+ ++ +|++.+|+++++|.||+++..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCC
Confidence 456677888898999999999999999874 33 367778888999999999864
No 126
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.46 E-value=0.098 Score=47.51 Aligned_cols=55 Identities=16% Similarity=0.254 Sum_probs=43.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe-CC--cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.++++|++|+++++|++|+.+ ++.+. |++. +| +++++|.||+++..
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~~-v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADG-GSQVT-VTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEEC-SSCEE-EEEESSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEc-CCeEE-EEEEcCCceEEEEcCEEEECCCC
Confidence 345667788888899999999999999974 33353 6654 56 57899999999875
No 127
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.44 E-value=0.11 Score=44.56 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CC--cEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g--~~~~ad~VI~a~p~ 99 (301)
...+.|.+.+++.|++++++++|++|.. + +++.+|++. +| +++++|.||+++..
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~-~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEG-D-ERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEE-S-SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEcc-C-CCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 3456677777777999999999999997 3 445557765 67 57899999999775
No 128
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=94.43 E-value=0.039 Score=51.37 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=43.8
Q ss_pred ccchHHHHHHHHH-cCcEEEecceeeEEEecCCC------cEEEEEEe---CCc--EEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g------~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 101 (301)
..+++.|.+.+++ .|++|+++++|++|..++++ ++.+|.+. +|+ ++.|+.||+|+....
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3567778888877 69999999999999984344 77778765 565 689999999987643
No 129
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.41 E-value=0.059 Score=47.01 Aligned_cols=55 Identities=16% Similarity=0.225 Sum_probs=43.2
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe--CC--cEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~ 99 (301)
.+.+.|.+.+++.|++|+++++|++|..+ ++++.+|++. +| +++++|.||+++..
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 35666777777789999999999999984 4555556664 67 57899999999875
No 130
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=94.40 E-value=0.071 Score=45.23 Aligned_cols=48 Identities=8% Similarity=0.009 Sum_probs=37.6
Q ss_pred HHHHHcCcEEEecceeeEEEecCCCcEEEEEEe--CCc--EEecCEEEEccCh
Q 022185 51 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 51 ~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 99 (301)
+.+++.|++|+++++|++|..+ ++++.+|++. +|+ ++++|.||+++..
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHhcCCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 3445689999999999999984 4456667766 775 6899999999764
No 131
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=94.26 E-value=0.066 Score=49.37 Aligned_cols=58 Identities=14% Similarity=0.075 Sum_probs=42.5
Q ss_pred cchHHHHHHHHHcC-cEEEecceeeEEEecCCC-cEEEEEEe--CC-----cEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~g-~~I~l~~~V~~I~~~~~g-~v~~V~~~--~g-----~~~~ad~VI~a~p~~~ 101 (301)
....++.+.++++| ++|++++.|++|..+++| ++++|++. +| .+++|+.||+++..-.
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~ 288 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLG 288 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCC
Confidence 33445555555565 899999999999986434 68888875 56 3578999999987643
No 132
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.23 E-value=0.066 Score=45.79 Aligned_cols=55 Identities=13% Similarity=0.236 Sum_probs=44.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|.+++++++|++|+..+++.+ .|.+.+|+ +.+|+||+++..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQADGVF-KLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCE-EEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcE-EEEECCCE-EEeCEEEECCCC
Confidence 45667777777778999999999999998655345 37777775 999999999887
No 133
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.18 E-value=0.085 Score=49.08 Aligned_cols=56 Identities=13% Similarity=0.126 Sum_probs=44.4
Q ss_pred cchHHHHHHHHHcCc--EEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~--~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|. +|+++++|++++.++++....|++.+|++++||.||+|+..
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 455666667777787 89999999999986553333588888988999999999884
No 134
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.18 E-value=0.089 Score=47.65 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=43.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.+++.|++|+++++|++|+.+ ++.+ .|++. +++++++|.||+++...
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEER-EDGV-TVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEE-EEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCeE-EEEEEeCCceeEEEcCEEEECcCCC
Confidence 345677888888899999999999999974 3334 35554 34678999999998763
No 135
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.04 E-value=0.087 Score=49.13 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=43.8
Q ss_pred cchHHHHHHHHHcCc--EEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~--~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|. +|+++++|++++.++++....|++.+|++++||.||+|+..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 455556666667777 89999999999986554333588888988999999999984
No 136
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.04 E-value=0.15 Score=46.66 Aligned_cols=56 Identities=14% Similarity=0.170 Sum_probs=43.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC---Cc--EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|++.|++|++++.|++|...+++.+. |++.+ |+ ++++|.||+++..
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~-v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQ-VTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEE-EEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEE-EEEEeCCCCeeEEEECCEEEEcccC
Confidence 456778888898999999999999999985455443 65544 54 4789999999875
No 137
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.04 E-value=0.078 Score=50.04 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=46.3
Q ss_pred ccchHHHHHHHHHcC-cEEEecceeeEEEecCCCcEEEEEE---eCCc--EEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g-~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~~ 101 (301)
..+...|.+.+++.| ++|+++++|++|..+ +++|.+|.+ .+|+ ++.|+.||+++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 357888888888788 999999999999984 566767754 3575 689999999997643
No 138
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.03 E-value=0.064 Score=46.30 Aligned_cols=56 Identities=14% Similarity=-0.067 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.+.+.+.+.+++.|++++++++|++|+.. ++.+.+|++.+| ++++|.||+|+....
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 56677777777789999999999999985 443422777676 899999999998643
No 139
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.01 E-value=0.061 Score=49.20 Aligned_cols=55 Identities=16% Similarity=0.127 Sum_probs=43.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC----CcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~----g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|+++|++|+++++|++|+.++++ + .|++.+ |+++++|.||+++..
T Consensus 226 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~-~-~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDG-V-YVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTE-E-EEEEESSSCCSSCEEESCEEECCCE
T ss_pred HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCe-E-EEEEeccCCCceEEEcCEEEECcCC
Confidence 345677888898899999999999999974332 3 477666 777899999999875
No 140
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.99 E-value=0.12 Score=47.23 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCC-cEEEEEEeC---C----cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG-TVKNFLLTN---G----NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g-~v~~V~~~~---g----~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|++.|++|+++++|++|+..+++ ++ .|++.+ | +++++|.||+++..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~-~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV-SMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEE-EEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEE-EEEEccCCCCcccceEEEcCEEEEeecc
Confidence 456677888898899999999999999985555 34 366654 2 57899999999875
No 141
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=93.99 E-value=0.1 Score=49.11 Aligned_cols=57 Identities=16% Similarity=0.161 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe-CC--cEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~~~ 101 (301)
.+...|.+.+++.|++|+.+++|++|..+ ++.+.+|++. +| ++++||.||.|....-
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 45677788888899999999999999985 3444468776 66 5789999999987643
No 142
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.95 E-value=0.049 Score=48.15 Aligned_cols=51 Identities=20% Similarity=0.323 Sum_probs=39.8
Q ss_pred HHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 49 IVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 49 l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
|.+.|.+ .+..|+++++|++++..+++.|+ |++.||++++||.||-|=...
T Consensus 114 L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~-v~~~dG~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 114 LKEILNKGLANTIQWNKTFVRYEHIENGGIK-IFFADGSHENVDVLVGADGSN 165 (412)
T ss_dssp HHHHHHTTCTTTEECSCCEEEEEECTTSCEE-EEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHhhccceEEEEEEEEeeeEcCCCeEE-EEECCCCEEEeeEEEECCCCC
Confidence 4444432 46789999999999987777674 888999999999999876653
No 143
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.94 E-value=0.094 Score=45.06 Aligned_cols=56 Identities=21% Similarity=0.326 Sum_probs=44.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.+++.+.+++++++|++|+.+++ .+ .|++.+|+++++|.||+++...
T Consensus 65 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~-~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVAPFNPVYSLGERAETLEREGD-LF-KVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHGGGCCEEEESCCEEEEEEETT-EE-EEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC-EE-EEEECCCCEEEeCEEEECCCCC
Confidence 34566777777778999999999999998533 34 3777778789999999998863
No 144
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=93.90 E-value=0.11 Score=47.04 Aligned_cols=54 Identities=20% Similarity=0.277 Sum_probs=42.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.+ +++..|.+ +|+++++|.||+++..
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCC
Confidence 345677888888899999999999999973 44434665 5668999999999875
No 145
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.83 E-value=0.17 Score=46.24 Aligned_cols=54 Identities=15% Similarity=0.095 Sum_probs=43.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.+ +++..|.+ +++++++|.||+++..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVET-DKGTYKADLVLVSVGV 280 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEE-TTEEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEE-CCCEEEcCEEEECcCC
Confidence 355677888898899999999999999973 44655666 4557999999999875
No 146
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.76 E-value=0.12 Score=47.04 Aligned_cols=55 Identities=16% Similarity=0.140 Sum_probs=43.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.++++|++|+++++|++|+.+ ++ ...|++. ++++++|.||+++...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCC
Confidence 356778888898999999999999999974 43 3346664 5579999999998763
No 147
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.74 E-value=0.15 Score=42.82 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=48.7
Q ss_pred eEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 33 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 33 ~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.++..+ ...+.+.+.+.|++.|++|+. ++|++|..+ + .|++.+|+++++|.||++++.
T Consensus 165 ~v~~v~~~-~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~~--~---~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 165 ETTFFTNG-IVEPDADQHALLAARGVRVET-TRIREIAGH--A---DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEEEECTT-TCCCCHHHHHHHHHTTCEEEC-SCEEEEETT--E---EEEETTSCEEEESEEEECCEE
T ss_pred cEEEEECC-CCCCCHHHHHHHHHCCcEEEc-ceeeeeecC--C---eEEeCCCCEEEEEEEEEccCc
Confidence 67777666 357888899999999999995 999999852 2 377888989999999999754
No 148
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.62 E-value=0.14 Score=47.68 Aligned_cols=55 Identities=9% Similarity=0.047 Sum_probs=46.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|++.|+++++++.|++++.. ++.+. |.+.+++++.+|.|++++.-
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~-~~~~~-v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM-DDKIL-VEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE-TTEEE-EEETTSCEEEESEEEECSCE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec-CCeEE-EEEcCCCeEEEEEEEEcccc
Confidence 557788899999999999999999999985 44453 77778888999999999864
No 149
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.56 E-value=0.13 Score=46.74 Aligned_cols=56 Identities=16% Similarity=0.346 Sum_probs=43.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CC--cEEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g--~~~~ad~VI~a~p~~ 100 (301)
..+.+.+.+.+++.|++|+++++|++|+.+++ .+. |++. +| +++++|.||+++...
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~-v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGD-GVK-LTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEECSSS-SEE-EEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCC-eEE-EEEEecCCCcceEEECCEEEECCCCC
Confidence 35567788889899999999999999997433 343 5554 44 678999999998763
No 150
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.53 E-value=0.15 Score=46.74 Aligned_cols=55 Identities=15% Similarity=0.249 Sum_probs=43.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC---C--cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+.+++ .+ .|++.+ | +++++|.||+++..
T Consensus 239 ~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~-~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGD-GA-KVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EE-EEEEEETTSCCCEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCC-EE-EEEEEecCCCceEEEEcCEEEEeeCC
Confidence 45677788889889999999999999998533 34 355542 5 57899999999875
No 151
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=93.48 E-value=0.21 Score=42.34 Aligned_cols=52 Identities=12% Similarity=0.205 Sum_probs=39.0
Q ss_pred HHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEeC---Cc--EEecCEEEEccCh
Q 022185 47 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 99 (301)
Q Consensus 47 ~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 99 (301)
..+.+.|++ .|++|+++++|++|..+ ++++.+|++.+ |+ ++.+|.||+++..
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcC-CCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 445667776 69999999999999974 45565676653 53 5789999998653
No 152
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=93.33 E-value=0.11 Score=48.01 Aligned_cols=58 Identities=16% Similarity=0.091 Sum_probs=42.0
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCC-cEEEEEEe--CC-----cEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~~-g~~I~l~~~V~~I~~~~~g-~v~~V~~~--~g-----~~~~ad~VI~a~p~~~ 101 (301)
....++.+..+++ +.+|++++.|++|..++++ ++++|++. +| .+++|+.||+++..-.
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccC
Confidence 3444555554455 4999999999999996445 68888875 45 2578999999987643
No 153
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.26 E-value=0.23 Score=42.03 Aligned_cols=50 Identities=24% Similarity=0.290 Sum_probs=38.1
Q ss_pred HHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEeC---Cc--EEecCEEEEccCh
Q 022185 48 PIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 99 (301)
Q Consensus 48 ~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 99 (301)
.+.+.+.+ .|++++++++|++|..+ +++.+|++.+ |+ ++++|.||+++..
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 45555554 49999999999999974 4455677765 75 6899999999765
No 154
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.25 E-value=0.11 Score=47.76 Aligned_cols=56 Identities=20% Similarity=0.231 Sum_probs=42.3
Q ss_pred cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC----cEEecCEEEEccCh
Q 022185 42 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG----NVIDGDAYVFATPV 99 (301)
Q Consensus 42 ~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g----~~~~ad~VI~a~p~ 99 (301)
...+.+.+.+.|+++|++|++++.|++|+. ++.+..+...|| +++.+|.||.++..
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCC
Confidence 456677888899999999999999999975 443333444455 35899999998753
No 155
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=93.24 E-value=0.14 Score=43.42 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCC--CcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDD--GTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~--g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.+.+.+++.|++++++++|+.|..+.+ +.+ .|.+.+|+++++|.+|+++...
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~-~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLH-QIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceE-EEEECCCCEEEeCEEEECcCCC
Confidence 4566777777778999999999999986422 234 4778788889999999998763
No 156
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=93.22 E-value=0.062 Score=50.37 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=46.5
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE--eCC-cEEecCEEEEccChhh-HhhcC
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NVIDGDAYVFATPVDI-LKLQL 106 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~--~~g-~~~~ad~VI~a~p~~~-l~~l~ 106 (301)
.+...|.+.+++.|++|+.+++|++|+.++++ |+ |++ .+| ++++||.||.+....- +.+.+
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-VE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-EE-EEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-EE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 45677788887789999999999999986554 53 665 577 6899999999987643 33444
No 157
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.18 E-value=0.15 Score=45.15 Aligned_cols=52 Identities=8% Similarity=0.045 Sum_probs=40.0
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
+.+.|.+.+ .|++|+++++|++|+.++++ +. |++.+|++++||.||.|....
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~-v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDSET-VQ-MRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECSSC-EE-EEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecCCE-EE-EEECCCCEEECCEEEECCCcc
Confidence 334444443 48999999999999986444 64 888888889999999998764
No 158
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.10 E-value=0.089 Score=46.68 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=40.5
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.....+.+++.|++++++++|++|+.. +. .|++.+|+++.+|++|+|+..
T Consensus 64 l~~~~~~~~~~~~i~~~~~~~V~~id~~-~~---~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 64 ILIKKNDWYEKNNIKVITSEFATSIDPN-NK---LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TBSSCHHHHHHTTCEEECSCCEEEEETT-TT---EEEETTSCEEECSEEEECCCE
T ss_pred ccCCCHHHHHHCCCEEEeCCEEEEEECC-CC---EEEECCCCEEECCEEEEecCC
Confidence 3334456666789999999999999973 33 277888889999999999875
No 159
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.02 E-value=0.2 Score=45.22 Aligned_cols=52 Identities=17% Similarity=0.247 Sum_probs=44.1
Q ss_pred cccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 42 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 42 ~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
...+.+.+.+.++++|++++++++|++++. + .|++.+|+++++|.||+++..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEece
Confidence 356788899999999999999999999874 2 267788999999999999875
No 160
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.01 E-value=0.17 Score=42.91 Aligned_cols=54 Identities=19% Similarity=0.173 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.+.+.+++.|+++++ ++|++|..+ ++.+ .|++.+|+++++|.||+++...
T Consensus 71 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~~-~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 71 DMIKVFNKHIEKYEVPVLL-DIVEKIENR-GDEF-VVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHTTTCCEEE-SCEEEEEEC---CE-EEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEec-CCEE-EEEECCCCEEEcCEEEECcCCC
Confidence 4667777777778999999 999999985 4445 3788787889999999998764
No 161
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=93.01 E-value=0.14 Score=48.51 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=44.3
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~-g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.|.+.+++. |++| ++..|+.|..+ +++|.+|++.+|++++||.||+|+...
T Consensus 118 ~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDL-LQDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EeeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 4577788888764 8998 46699999874 566777888888899999999999864
No 162
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.86 E-value=0.19 Score=43.77 Aligned_cols=53 Identities=15% Similarity=-0.016 Sum_probs=40.9
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
+.+.+.+.+++.|++|+++++|++|+.++++ +. |.+.+| ++++|.||+++...
T Consensus 90 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~~-v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 90 YAEYLQVVANHYELNIFENTVVTNISADDAY-YT-IATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EE-EEESSC-CEEEEEEEECCCST
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-EE-EEeCCC-EEEeCEEEECCCCC
Confidence 4455666667789999999999999985333 43 777666 58999999999864
No 163
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=92.77 E-value=0.14 Score=46.06 Aligned_cols=50 Identities=14% Similarity=0.089 Sum_probs=39.3
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC----CcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~----g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|++|+++++|++|+. ++ + ++.+ |+++++|.||++++.
T Consensus 201 ~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~-v---~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--DK-V---IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--SE-E---EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce-E---EEEecCCCceEEeeeEEEECCCC
Confidence 4567888899999999999999999975 33 3 3334 678999999998653
No 164
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=92.71 E-value=0.42 Score=44.45 Aligned_cols=80 Identities=21% Similarity=0.231 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCC-CCCCeEEeeccccCCCCCchhHHHHH
Q 022185 193 IDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRS-PVEGFYLAGDYTKQKYLASMEGAVLS 271 (301)
Q Consensus 193 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-p~~~l~~aGd~~~~~~~~~v~gA~~S 271 (301)
+.+.+..|.+..|++.. ...++.--..++ +.+.. .-. .....+ .++|||.|||-.. |.+|+-.|..+
T Consensus 463 l~e~~~~~~~~~~g~~~----~~~~l~g~e~~~--ssp~r-i~~---~~~~~~~~~~gly~~GegaG--~a~gi~~Aa~~ 530 (549)
T 3nlc_A 463 IREAIPAFDRKIKGFAS----EDGLLTGVETRT--SSPVC-IKR---GKDFQSVNLKGFYPAGEGAG--YAGGILSAGID 530 (549)
T ss_dssp HHHHHHHHHTTSTTTTC----TTCEEEEEECCS--SCSEE-CCC---TTTTSCTTCBTEEECHHHHT--SCCSHHHHHHH
T ss_pred HHHHHHHhhccCcCCCC----CCcEEEEEeecc--CCcee-EEE---CCCceECCcCCEEEccccCC--hhhHHHHHHHH
Confidence 44456777777888763 223443333332 11100 000 122344 5899999999885 44899999999
Q ss_pred HHHHHHHHHHHhh
Q 022185 272 GKLCAQAIVQDYV 284 (301)
Q Consensus 272 G~~aA~~i~~~~~ 284 (301)
|.++|+.|++.+.
T Consensus 531 G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 531 GIKVAEAVARDIV 543 (549)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999874
No 165
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.69 E-value=0.18 Score=42.96 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=39.3
Q ss_pred hHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC-----CcEEecCEEEEccCh
Q 022185 46 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPV 99 (301)
Q Consensus 46 ~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~-----g~~~~ad~VI~a~p~ 99 (301)
.+...+.|++.|++++++++|++|..+ ++ +.+|++.+ ++++++|.||++++.
T Consensus 192 ~~~~~~~l~~~gv~~~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 192 HEHSVENLHASKVNVLTPFVPAELIGE-DK-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp CHHHHHHHHHSSCEEETTEEEEEEECS-SS-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred cHHHHHHHhcCCeEEEeCceeeEEecC-Cc-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 345566788899999999999999974 33 33466654 356899999998764
No 166
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=92.68 E-value=0.11 Score=47.66 Aligned_cols=59 Identities=15% Similarity=0.130 Sum_probs=43.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecC-CCcEEEEEE--e-CC--cEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLL--T-NG--NVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~-~g~v~~V~~--~-~g--~~~~ad~VI~a~p~~~ 101 (301)
..+.+.|.+.+++.|++|+++++|++|..++ ++....|++ . +| ++++||.||.++...-
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 3456677788888899999999999999742 222224666 3 55 4689999999988744
No 167
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=92.58 E-value=0.13 Score=47.81 Aligned_cols=56 Identities=16% Similarity=0.172 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHcCc--EEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~--~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+..++.|. .|+++++|++++.++++....|++.+|++++||.||+|+..
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 455555566666676 89999999999986543333588888988999999999984
No 168
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.56 E-value=0.081 Score=50.78 Aligned_cols=51 Identities=18% Similarity=0.085 Sum_probs=39.6
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE---eCCcEEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~~~~ad~VI~a~p~ 99 (301)
+.+.+.+.|+++|++|+++++|++|+. ++ +. ++. .+++++++|.||+++..
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~-~~-v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGA--GG-VT-VRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEET--TE-EE-EEETTTCCEEEEECSEEEEESCE
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEEC--Ce-EE-EEEccCCeEEEEECCEEEECCCC
Confidence 456788889999999999999999985 33 22 332 24567899999999876
No 169
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=92.55 E-value=0.052 Score=48.21 Aligned_cols=45 Identities=7% Similarity=0.066 Sum_probs=37.0
Q ss_pred HHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 53 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 53 l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+++.|++|++++.|+.++.+.++ . .|++.+|+++++|.||+++|.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~-~-~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEA-M-TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTT-T-EEEETTSCEEECSEEEECCCE
T ss_pred HHhcCcEEEeCceEEEEEecccc-e-EEEcCCCcEEEeeEEEEecCc
Confidence 34689999999999999985444 3 388889999999999998764
No 170
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=92.48 E-value=0.29 Score=41.39 Aligned_cols=52 Identities=12% Similarity=0.043 Sum_probs=38.9
Q ss_pred HHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEe---CCc--EEecCEEEEccCh
Q 022185 47 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 47 ~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 99 (301)
..+.+.+.+ .|++|+++++|++|..+ ++++.+|++. +|+ ++++|.||+++..
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 456666654 69999999999999974 3445456665 565 6899999998754
No 171
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=92.35 E-value=0.12 Score=45.75 Aligned_cols=52 Identities=10% Similarity=0.086 Sum_probs=39.2
Q ss_pred hHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 46 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 46 ~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.+.|.+.++ +++|+++++|++|+.+++ .+. |++.+|++++||.||.|....-
T Consensus 131 ~~~L~~~~~--~~~i~~~~~v~~i~~~~~-~v~-v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 131 RAILLNSLE--NDTVIWDRKLVMLEPGKK-KWT-LTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHTSC--TTSEEESCCEEEEEECSS-SEE-EEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHhhcC--CCEEEECCEEEEEEECCC-EEE-EEECCCcEEecCEEEECCCcch
Confidence 344444442 468999999999998644 464 8888888899999999988743
No 172
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=92.33 E-value=0.41 Score=40.81 Aligned_cols=51 Identities=12% Similarity=0.050 Sum_probs=38.3
Q ss_pred HHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEe---CCc--EEecCEEEEccCh
Q 022185 47 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 47 ~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 99 (301)
..+.+.+.+ .|++|+++++|++|..+ +++.+|++. +|+ ++++|.||+++..
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGA--DSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccC--CcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 455566654 69999999999999973 445567765 564 6899999998764
No 173
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=92.18 E-value=0.34 Score=44.36 Aligned_cols=54 Identities=13% Similarity=-0.014 Sum_probs=42.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe--CC--cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|++. ++|+++++|++|+.+ ++.+. |++. +| +++++|.||+++..
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~-~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEK-EDAVE-VIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEEC-SSSEE-EEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEc-CCEEE-EEEEeCCCceEEEECCEEEEeeCC
Confidence 34566777788766 999999999999985 44454 6664 67 67899999999876
No 174
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=92.01 E-value=0.3 Score=46.37 Aligned_cols=58 Identities=16% Similarity=0.115 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHHc-Cc-EEEecceeeEEEecCC--CcEEEEEE---eCCc--EEecCEEEEccChh
Q 022185 43 ERLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVD 100 (301)
Q Consensus 43 ~~l~~~l~~~l~~~-g~-~I~l~~~V~~I~~~~~--g~v~~V~~---~~g~--~~~ad~VI~a~p~~ 100 (301)
..+...|.+.+++. |+ +|+.+++|++|..+++ |+|.+|.+ .+|+ .+.|+.||+|+...
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 35677788888777 99 9999999999998533 27878764 3564 58999999988753
No 175
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=91.92 E-value=0.24 Score=41.93 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=41.6
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|+++++ ++|++|+.+ ++.+ .|++.+|+++++|.||+++..
T Consensus 60 ~~~~~l~~~~~~~~v~~~~-~~v~~i~~~-~~~~-~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 60 DFMQPWQEQCFRFGLKHEM-TAVQRVSKK-DSHF-VILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHTTSCEEEC-SCEEEEEEE-TTEE-EEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEEc-CCEE-EEEEcCCCEEECCEEEECCCC
Confidence 4566777777778999998 799999985 3334 366778888999999999985
No 176
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=91.78 E-value=0.2 Score=45.17 Aligned_cols=55 Identities=20% Similarity=0.015 Sum_probs=40.8
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC---Cc---EEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN---VIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~---~~~ad~VI~a~p~~ 100 (301)
.+.+.|.+.+++.+..|+++++|++|+.. ++.+ .|++.+ |+ ++++|.||+|+...
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~-~~~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKK-DGSW-VVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEE-TTEE-EEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeC-CCeE-EEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 45555666665567889999999999985 4434 366655 66 78999999999873
No 177
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=91.73 E-value=0.27 Score=45.68 Aligned_cols=55 Identities=9% Similarity=0.105 Sum_probs=39.6
Q ss_pred chHHHHHHHHHcC--cEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLG--GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g--~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.+.|....++.+ .+|+++++|++++.++++....|++.+|++++||.||+|+..
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 3334444444444 689999999999986543233488888888999999999875
No 178
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=91.71 E-value=0.19 Score=45.83 Aligned_cols=57 Identities=25% Similarity=0.251 Sum_probs=43.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe-CCcEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~-~g~~~~ad~VI~a~p~~~ 101 (301)
..+.+.|.+.+++.|++|+.+++| +|..+ ++++.+|.+. ++.++.||.||+++....
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 357788888887789999999999 99874 5667667653 223578999999987643
No 179
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.63 E-value=0.21 Score=45.29 Aligned_cols=53 Identities=21% Similarity=0.237 Sum_probs=41.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC--cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++.|++|+++++|++|+. ++ +. ++..+| +++++|.||+++..
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~-v~-v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN--GC-LL-ANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET--TE-EE-EECSSSCCCEECCSCEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe--CC-EE-EEECCCceEEEECCEEEECcCC
Confidence 34567788888889999999999999985 33 43 554456 57999999999876
No 180
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.55 E-value=0.31 Score=41.71 Aligned_cols=53 Identities=17% Similarity=0.266 Sum_probs=42.1
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.+.+.+++.|+++++++ |++|+.. ++.+. |++ +|+++++|.||+++...
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~-~~~~~-v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFS-SKPFK-LFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECS-SSSEE-EEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEc-CCEEE-EEE-CCcEEEcCEEEECCCCC
Confidence 566777778878899999997 9999974 33353 666 77889999999998864
No 181
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=91.51 E-value=0.25 Score=47.10 Aligned_cols=57 Identities=12% Similarity=0.118 Sum_probs=45.3
Q ss_pred ccchHHHHHHHHHc--CcEEEecceeeEEEecCC--CcEEEEEEe---CCc--EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLLT---NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~--g~~I~l~~~V~~I~~~~~--g~v~~V~~~---~g~--~~~ad~VI~a~p~ 99 (301)
..+...|.+.+++. |++|+.++.|++|..+++ |+|.+|.+. +|+ .+.|+.||+|+.-
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 45778888888877 999999999999998544 378888652 453 5889999999875
No 182
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.35 E-value=0.18 Score=44.30 Aligned_cols=49 Identities=22% Similarity=0.307 Sum_probs=40.2
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.++++|++|+++++|++|+. + +|++.+|+ +++|.||+++..
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~----~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEANE--E----GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEECS--S----EEEETTEE-EECSCEEEECCE
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEe--e----EEEECCCE-EEcCEEEECcCC
Confidence 4566778889899999999999999972 2 26677887 999999999875
No 183
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.27 E-value=0.38 Score=43.70 Aligned_cols=56 Identities=25% Similarity=0.294 Sum_probs=41.1
Q ss_pred ccchHHHHHHHHHcCcE--EEecceeeEEEecCCC-cEEEEEEeC---C--cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGE--VRLNSRVQKIELNDDG-TVKNFLLTN---G--NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~--I~l~~~V~~I~~~~~g-~v~~V~~~~---g--~~~~ad~VI~a~p~ 99 (301)
..+.+.|.+.+++.|++ |+++++|++|+..+++ .+ .|++.+ | +++++|.||+|+..
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE-EEEEEETTTTEEEEEEESEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEcCCCceEEEEcCEEEECCCC
Confidence 34556666677677887 9999999999985442 33 366654 4 56899999999985
No 184
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.25 E-value=0.45 Score=42.94 Aligned_cols=55 Identities=20% Similarity=0.163 Sum_probs=38.8
Q ss_pred ccchHHHHHHHHH------cCcEEEecceeeEEEecCCCcEEEEEEe---CCc--EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQS------LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~------~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 99 (301)
..+++.+.+.+-+ .|++|+++++|++|+.+ ++.+ .|++. +|+ ++++|.||+++..
T Consensus 310 ~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~-~~~~-~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 310 TDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATAT-AQGI-ELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEE-TTEE-EEEEEETTTCCEEEEEESEEEECCCE
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEec-CCEE-EEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 3444444444432 58999999999999985 3434 36665 665 3899999999876
No 185
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=91.23 E-value=0.56 Score=40.53 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=31.1
Q ss_pred ccchHHHHHHHHHc-CcEEEecceeeEEEecC--C-C--cEEEEEEe
Q 022185 43 ERLCLPIVEHIQSL-GGEVRLNSRVQKIELND--D-G--TVKNFLLT 83 (301)
Q Consensus 43 ~~l~~~l~~~l~~~-g~~I~l~~~V~~I~~~~--~-g--~v~~V~~~ 83 (301)
..+.+.|.+.+.+. |++|+.+++|+++..++ + | +|.+|++.
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~ 192 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTN 192 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEec
Confidence 45677888877764 99999999999999853 3 4 78888763
No 186
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=91.19 E-value=0.37 Score=42.81 Aligned_cols=55 Identities=25% Similarity=0.377 Sum_probs=41.3
Q ss_pred cchHHHHHHHHH-cC-cEEEecceeeEEEecCCCcEEEEEEeC---C--cEEecCEEEEccChhh
Q 022185 44 RLCLPIVEHIQS-LG-GEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 101 (301)
Q Consensus 44 ~l~~~l~~~l~~-~g-~~I~l~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~~ 101 (301)
.|.+.|.+.+++ .| ++|+++++|++|+. +++ +. |++.+ | ++++||.||.|....-
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RV-LIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EE-EEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cE-EEEecCCCCCceEEecCEEEECCCccc
Confidence 355677777765 36 58999999999998 555 53 66654 7 5789999999987643
No 187
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=91.10 E-value=0.4 Score=40.63 Aligned_cols=64 Identities=13% Similarity=0.213 Sum_probs=48.1
Q ss_pred CCceEeeecCCCcccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEcc
Q 022185 30 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFAT 97 (301)
Q Consensus 30 ~~~~~~~~~GG~~~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~ 97 (301)
.+..+..+..+ ..+.+.+.+.|++.|.+++.++ |+.|.. +++++..|++.+|+++++|.+|+++
T Consensus 169 ~~~~v~i~~~~--~~~~~~~~~~l~~~g~~~~~~~-v~~~~~-~~~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 169 WSTDLVIATNG--NELSQTIMDELSNKNIPVITES-IRTLQG-EGGYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp TCSCEEEECSS--CCCCHHHHHHHHTTTCCEECSC-EEEEES-GGGCCCEEEETTSCEECCCEEEECC
T ss_pred CCceEEEEecc--ccchhhhhhhhhccceeEeeee-EEEeec-CCCeeeeeeccccceeeecceeeee
Confidence 34455666555 5678889999999999998765 778876 3556767888899888888877653
No 188
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.10 E-value=0.58 Score=39.95 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=43.9
Q ss_pred CceEeeecCCCcccchHHHHHH-HHHcCcEEEecceeeEEEecCCC-cEEEEEEe---CC--cEEecCEEEEccCh
Q 022185 31 GSKMAFLDGNPPERLCLPIVEH-IQSLGGEVRLNSRVQKIELNDDG-TVKNFLLT---NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 31 ~~~~~~~~GG~~~~l~~~l~~~-l~~~g~~I~l~~~V~~I~~~~~g-~v~~V~~~---~g--~~~~ad~VI~a~p~ 99 (301)
+..+..+.-+-.-...+.+.+. +++.|++|+++++|++|..++++ ++.+|++. +| +++++|.||+++..
T Consensus 182 g~~V~lv~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 182 GSKVYIIHRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp SSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CCeEEEEecCCcCCccHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 4455555433101123455533 45689999999999999974321 45556654 35 46899999999765
No 189
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=90.85 E-value=1.1 Score=38.76 Aligned_cols=44 Identities=23% Similarity=0.305 Sum_probs=36.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
..+...|.+.++++|++|+. ++|++|... . + +||.||+|+....
T Consensus 142 ~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~----~---------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 142 PKYCQYLARELQKLGATFER-RTVTSLEQA----F---------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCSBGGGT----C---------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEcccHhhc----C---------c-CCCEEEECCCcch
Confidence 46788999999999999999 999988752 0 1 7999999998765
No 190
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=90.76 E-value=0.59 Score=39.79 Aligned_cols=54 Identities=15% Similarity=0.192 Sum_probs=41.7
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEec--CCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELN--DDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~--~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|++++. .+|++|+.. +++.+ .|.+.+|+++++|+||+++..
T Consensus 66 ~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~-~v~~~~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 66 ELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYP-FTVRGYNGEYRAKAVILATGA 121 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCC-EEEEESSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceE-EEEECCCCEEEeCEEEECcCC
Confidence 5666777778788999988 689999984 23213 366778888999999999886
No 191
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=90.75 E-value=0.39 Score=44.34 Aligned_cols=56 Identities=16% Similarity=0.222 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecC--CCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELND--DGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~--~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.+.+.+++.|++++.+++|++|.... ++.+ .|++.+|+++++|.||+++...
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~-~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLH-QIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceE-EEEECCCCEEEcCEEEECCCCC
Confidence 456777788878899999999999998632 2234 4778788889999999999863
No 192
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=90.51 E-value=0.15 Score=43.81 Aligned_cols=41 Identities=22% Similarity=0.396 Sum_probs=30.0
Q ss_pred CCCCCCeEEeeccccCC---C-C-CchhHHHHHHHHHHHHHHHHhh
Q 022185 244 RSPVEGFYLAGDYTKQK---Y-L-ASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~~---~-~-~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
.+.+|+||.|||.+..- + + ..+-+++.||++||+.|++.+.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 45578999999975321 1 0 2355678899999999999874
No 193
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=90.48 E-value=0.71 Score=40.15 Aligned_cols=58 Identities=9% Similarity=0.127 Sum_probs=43.8
Q ss_pred ccchHHHHHHHHH-cCcEEEecceeeEEEecCC----------------C--cEEEEEEe--------------CCcEEe
Q 022185 43 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDD----------------G--TVKNFLLT--------------NGNVID 89 (301)
Q Consensus 43 ~~l~~~l~~~l~~-~g~~I~l~~~V~~I~~~~~----------------g--~v~~V~~~--------------~g~~~~ 89 (301)
..+.+.|.+.+++ .|++|+.++.|+++..+++ | +|.+|++. ++.+++
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 4566888888877 4999999999999988542 3 67777662 224689
Q ss_pred cCEEEEccChh
Q 022185 90 GDAYVFATPVD 100 (301)
Q Consensus 90 ad~VI~a~p~~ 100 (301)
|++||.|+...
T Consensus 240 Ak~VV~ATG~~ 250 (344)
T 3jsk_A 240 APVIISTTGHD 250 (344)
T ss_dssp CSEEEECCCSS
T ss_pred cCEEEECCCCC
Confidence 99999998753
No 194
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.38 E-value=0.29 Score=42.48 Aligned_cols=52 Identities=17% Similarity=0.258 Sum_probs=39.6
Q ss_pred hHHHHHHHHHcC-cEEEecceeeEEEecCCCcEEEEEEeCCcEEe-cCEEEEccCh
Q 022185 46 CLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVID-GDAYVFATPV 99 (301)
Q Consensus 46 ~~~l~~~l~~~g-~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~-ad~VI~a~p~ 99 (301)
.+.+.+.+++.| ++|+++++|++|+.+ ++.+ .|++.+|+++. +|.||+++..
T Consensus 217 ~~~l~~~l~~~g~v~~~~~~~v~~i~~~-~~~~-~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 217 RQRLGNVIKQGARIEMNVHYTVKDIDFN-NGQY-HISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHHHTTCCEEEECSCCEEEEEEE-TTEE-EEEESSSCCEEESSCCEECCCB
T ss_pred HHHHHHHHhhCCcEEEecCcEEEEEEec-CCce-EEEecCCeEeccCCceEEeecc
Confidence 467777777786 999999999999864 3333 47777886664 6999998875
No 195
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=89.49 E-value=0.64 Score=39.56 Aligned_cols=53 Identities=23% Similarity=0.341 Sum_probs=42.1
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE---eCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|+++++++ |++|+.. ++.+. +.+ .+++++.+|.||+++..
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~-~~~~~-v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLS-SKPFK-LWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECS-SSSEE-EEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEc-CCEEE-EEEEecCCCcEEEeCEEEECcCC
Confidence 567778888888999999999 9999984 44453 655 35677999999999876
No 196
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=89.45 E-value=0.6 Score=40.03 Aligned_cols=52 Identities=17% Similarity=0.325 Sum_probs=40.8
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEE-EEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNF-LLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V-~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|+++++++ |++|+. ++. + .| .+.+|+++++|.||+++..
T Consensus 72 ~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~-~-~v~~~~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 72 ELMDEMREQALRFGADLRMED-VESVSL-HGP-L-KSVVTADGQTHRARAVILAMGA 124 (335)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEEC-SSS-S-EEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEEee-EEEEEe-CCc-E-EEEEeCCCCEEEeCEEEECCCC
Confidence 456677777777899999997 999987 333 3 26 6667888999999999876
No 197
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=89.44 E-value=0.57 Score=42.03 Aligned_cols=51 Identities=14% Similarity=0.038 Sum_probs=38.3
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE--eC-----CcEEecCEEEEccC
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TN-----GNVIDGDAYVFATP 98 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~--~~-----g~~~~ad~VI~a~p 98 (301)
...+.+.+.++++|++++++++|++|+. ++ +. +.. .+ ++++++|.||++++
T Consensus 209 ~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~-v~-~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 209 DSKGILTKGLKEEGIEAYTNCKVTKVED--NK-MY-VTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp THHHHHHHHHHHTTCEEECSEEEEEEET--TE-EE-EEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEC--Ce-EE-EEecccCCccccceEEEEeEEEEcCC
Confidence 3567788889899999999999999985 33 32 332 22 45789999999865
No 198
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=89.43 E-value=0.51 Score=42.32 Aligned_cols=53 Identities=17% Similarity=0.088 Sum_probs=38.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC--cEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~ 99 (301)
....+.+.+.++++|+++++++.|++|+. ++ +. +...+| +++++|.||.+++.
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~-~~-~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIEP--DK-VI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEECS--SE-EE-EECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEeC--Cc-eE-EEeeCCCceEeecceEEEeccC
Confidence 33445677788889999999999999974 33 42 444344 57899999998764
No 199
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=89.19 E-value=0.49 Score=42.66 Aligned_cols=55 Identities=18% Similarity=0.091 Sum_probs=38.4
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCC-CcE--EEEEEeCCc----EEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTV--KNFLLTNGN----VIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~-g~v--~~V~~~~g~----~~~ad~VI~a~p~ 99 (301)
+.+.+....++.+.+|+++++|++|+..++ ++. ..|++.+|+ ++++|.||+++..
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 334444445556899999999999997421 222 136666665 7999999999875
No 200
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=88.97 E-value=0.59 Score=39.57 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=34.3
Q ss_pred CCCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 022185 242 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 285 (301)
Q Consensus 242 ~~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~ 285 (301)
..+|..++||.+||-+..++ ..+.-|+..|+.||..|.+.+..
T Consensus 265 ~~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVRDKGL-RQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp TSBCSSTTEEECSTTBSCSC-CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeecCCCcc-hHHHHHHHHHHHHHHHHHHHHHh
Confidence 34577899999999876543 36788999999999999887654
No 201
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=88.96 E-value=0.47 Score=43.98 Aligned_cols=54 Identities=9% Similarity=0.047 Sum_probs=40.5
Q ss_pred HHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEeC---Cc--EE---ecCEEEEccChhh
Q 022185 47 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDI 101 (301)
Q Consensus 47 ~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~---~ad~VI~a~p~~~ 101 (301)
.++.+.+.+ .|++|++++.|++|..+ ++++++|++.+ |+ ++ .++.||+++..-.
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 345555544 58999999999999984 56788898864 63 33 7899999987743
No 202
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=88.92 E-value=0.91 Score=38.32 Aligned_cols=54 Identities=9% Similarity=0.033 Sum_probs=40.2
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.+...+.+.+.+.....+..|..+...+++.. .|.+.+|+++++|+||+|+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 62 FKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLF-EIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHTTSTTEEEEECCEEEEEECTTSCE-EEEETTCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcE-EEEECCCCEEEeCEEEEccCC
Confidence 445555666666777777777888887656644 478888999999999999975
No 203
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=88.73 E-value=0.95 Score=38.27 Aligned_cols=53 Identities=19% Similarity=0.303 Sum_probs=41.3
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.+.+.+++.|+++++++ |+.|+.. ++.+. | +.+|+++++|.+|+++...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~-v~~i~~~-~~~~~-v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 63 LLMERMHEHATKFETEIIFDH-INKVDLQ-NRPFR-L-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECS-SSSEE-E-EESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEee-eeEEEec-CCEEE-E-EeCCCEEEcCEEEECCCCC
Confidence 566677777778899999997 9999874 44453 5 5677889999999998763
No 204
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=88.35 E-value=0.79 Score=41.55 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=33.6
Q ss_pred cCcEEEecceeeEEEecCCC-cEEEEEEe---------------CC--cEEecCEEEEccCh
Q 022185 56 LGGEVRLNSRVQKIELNDDG-TVKNFLLT---------------NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 56 ~g~~I~l~~~V~~I~~~~~g-~v~~V~~~---------------~g--~~~~ad~VI~a~p~ 99 (301)
.|++|++++.+++|..++++ ++.+|++. +| +++++|.||.++..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 78999999999999874335 66556543 34 46899999999865
No 205
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=88.33 E-value=0.72 Score=38.43 Aligned_cols=54 Identities=11% Similarity=0.035 Sum_probs=39.9
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 44 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 44 ~l~~~l~~~l~~~-g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.+.+.+++. +.++. +.+|++|+.++++ + .|++.+|+++++|.||+++...
T Consensus 57 ~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~-~-~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 57 EIIAEARRQIERYPTIHWV-EGRVTDAKGSFGE-F-IVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTE-E-EEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCe-E-EEEECCCCEEEcCEEEECCCCC
Confidence 5566677777665 55554 5699999985333 4 4788888889999999998763
No 206
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.32 E-value=1.1 Score=41.26 Aligned_cols=52 Identities=10% Similarity=0.190 Sum_probs=38.9
Q ss_pred HHHHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEEeC---Cc--EEecCEEEEccCh
Q 022185 47 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 99 (301)
Q Consensus 47 ~~l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 99 (301)
..+.+.|++ .|++|++++.|++|..+ ++++.+|++.+ |+ ++.+|.||+++..
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEEC-SSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcC-CCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 446667766 59999999999999974 45666677653 53 5789999988663
No 207
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=88.23 E-value=0.91 Score=34.93 Aligned_cols=49 Identities=18% Similarity=0.074 Sum_probs=36.3
Q ss_pred CCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhhcCCCcc
Q 022185 244 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRL 294 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~~~~~~~~ 294 (301)
++..+++|.+||-+.... .....|...|..+|..|...+.. .++..|+|
T Consensus 132 ~t~~~~i~a~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~ 180 (180)
T 2ywl_A 132 RTSYPRVYAAGVARGKVP-GHAIISAGDGAYVAVHLVSDLRG-EPYKDHAL 180 (180)
T ss_dssp BCSSTTEEECGGGGTCCS-CCHHHHHHHHHHHHHHHHHHHHT-SCCCCCCC
T ss_pred CcCCCCEEEeecccCcch-hhHHHHHHhHHHHHHHHHHHhhh-ccccccCC
Confidence 445789999999887642 26788999999999999877642 35555554
No 208
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=88.18 E-value=0.54 Score=43.70 Aligned_cols=46 Identities=11% Similarity=0.134 Sum_probs=36.6
Q ss_pred HcCcEEEecceeeEEEecCCCcEEEEEEeC---Cc--EEecC-EEEEccChh
Q 022185 55 SLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGD-AYVFATPVD 100 (301)
Q Consensus 55 ~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad-~VI~a~p~~ 100 (301)
+.|++|++++.|++|..++++++++|++.+ |+ ++.|+ .||+++..-
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 468999999999999995337788888754 53 57898 899988763
No 209
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=88.10 E-value=0.87 Score=40.95 Aligned_cols=53 Identities=19% Similarity=0.269 Sum_probs=40.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.+++. +++++++.|++|+.+ + ++..+ ..+|+++++|.||+++..
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~-~-~v~~v-~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGE-E-RVEKV-VTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECS-S-SCCEE-EETTEEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEecc-C-cEEEE-EeCCCEEECCEEEEeeCC
Confidence 34556777888777 999999999999863 3 34334 347778999999999875
No 210
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=87.97 E-value=0.91 Score=45.29 Aligned_cols=50 Identities=18% Similarity=0.271 Sum_probs=39.0
Q ss_pred HHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC-------C--cEEecCEEEEccCh
Q 022185 50 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------G--NVIDGDAYVFATPV 99 (301)
Q Consensus 50 ~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~-------g--~~~~ad~VI~a~p~ 99 (301)
.+.+++.|++|++++.|++|..++++++.+|++.+ | +++++|.||+++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 56778899999999999999973245565676654 4 57899999999864
No 211
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=86.87 E-value=1.4 Score=40.54 Aligned_cols=56 Identities=18% Similarity=0.162 Sum_probs=40.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCC---CcEEEEE--EeCC-c--EEecCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDD---GTVKNFL--LTNG-N--VIDGDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~---g~v~~V~--~~~g-~--~~~ad~VI~a~p~ 99 (301)
..+.+.+.+.|++.|++|++++.|++|...++ +.+. |+ ..+| + ++++|.||+++..
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~-v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLR-VVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEE-EEEEESSSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEE-EEEEECCCcEEEEEECCEEEEecCC
Confidence 45677788889899999999999988876432 3332 43 3355 3 4679999999875
No 212
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=86.58 E-value=1.3 Score=41.10 Aligned_cols=51 Identities=24% Similarity=0.337 Sum_probs=37.6
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeC---C--cEEecCEEEEccChh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVD 100 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~ 100 (301)
+.+.|.+.+++. |+++++|++|+.++++ |+ |++.+ | ++++||+||.|....
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v~-v~~~~~~~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDH-VR-ATITDLRTGATRAVHARYLVACDGAS 195 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSC-EE-EEEEETTTCCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCE-EE-EEEEECCCCCEEEEEeCEEEECCCCC
Confidence 445566666554 9999999999986554 64 66554 6 468999999998764
No 213
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=86.11 E-value=0.88 Score=38.96 Aligned_cols=45 Identities=13% Similarity=0.055 Sum_probs=33.1
Q ss_pred HHHcCcEEEecceeeEEEecCCCcEEEEEEe---CC--cEEecCEEEEccCh
Q 022185 53 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 53 l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g--~~~~ad~VI~a~p~ 99 (301)
+++.|++++++++|++|+.+ + ++.+|++. +| +++++|.||+++..
T Consensus 201 ~~~~gV~v~~~~~v~~i~~~-~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 201 RNNDKIRFLTNHTVVAVDGD-T-TVTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp HHCTTEEEECSEEEEEEECS-S-SCCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred hccCCcEEEeCceeEEEecC-C-cEeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 45689999999999999974 3 33335543 34 46899999998764
No 214
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=86.04 E-value=0.96 Score=40.51 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=37.4
Q ss_pred HHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 50 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 50 ~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+++.|++++++++|+.|+.. +. .|++.+|+++++|.+|+++..
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~-~~---~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRD-RQ---QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETT-TT---EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEeCCEEEEEECC-CC---EEEECCCCEEECCEEEEcCCC
Confidence 35566789999999999999973 33 267778888999999999876
No 215
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=85.86 E-value=2.2 Score=39.95 Aligned_cols=56 Identities=13% Similarity=0.195 Sum_probs=40.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEec-----CC---CcEEEEE--EeCCcEEe--cCEEEEccCh
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN-----DD---GTVKNFL--LTNGNVID--GDAYVFATPV 99 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~-----~~---g~v~~V~--~~~g~~~~--ad~VI~a~p~ 99 (301)
..+.+.+.+.|++.|+++++++.|++|... ++ +.+. ++ ..+|++++ +|.||+++..
T Consensus 326 ~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 326 QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEETTSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEeCCCcEEeccCCEEEEEeCC
Confidence 456777788888899999999999888642 12 4332 33 34676655 9999999875
No 216
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=85.22 E-value=1 Score=40.78 Aligned_cols=51 Identities=16% Similarity=0.272 Sum_probs=37.0
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe--CCc--EEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 99 (301)
+.+.+.+.+ .++|+++++|++|+.++++.+. |++. +|+ ++++|.||+++..
T Consensus 216 ~~~~l~~~l---~v~i~~~~~v~~i~~~~~~~v~-v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 216 IVNTLLSIL---KLNIKFNSPVTEVKKIKDDEYE-VIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp HHHHHHHHH---CCCEECSCCEEEEEEEETTEEE-EEECCTTSCCEEEEESCEEECCCE
T ss_pred HHHHHHhcC---EEEEEECCEEEEEEEcCCCcEE-EEEEecCCceEEEEcCEEEECcCC
Confidence 334444444 4999999999999985424453 7776 565 7899999999975
No 217
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.00 E-value=0.79 Score=40.12 Aligned_cols=46 Identities=24% Similarity=0.302 Sum_probs=36.0
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 49 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 49 l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
..+.+++.|++++++++|+.|+.. ++. |+ .+|+++++|++|+|+..
T Consensus 66 ~~~~~~~~~v~~~~g~~v~~id~~--~~~--V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 66 SLDWYRKRGIEIRLAEEAKLIDRG--RKV--VI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp CHHHHHHHTEEEECSCCEEEEETT--TTE--EE-ESSCEEECSEEEECCCE
T ss_pred CHHHHHhCCcEEEECCEEEEEECC--CCE--EE-ECCcEEECCEEEECCCC
Confidence 345566779999999999999873 332 55 57788999999999875
No 218
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=84.87 E-value=1.4 Score=37.29 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=39.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.|+++++ .+|++|+.. ++.+. |.+ +|+++++|.||+++..
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~~~-v~~-~~~~~~~~~li~AtG~ 124 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKT-QGGFD-IET-NDDTYHAKYVIITTGT 124 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEE-TTEEE-EEE-SSSEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEe-CCEEE-EEE-CCCEEEeCEEEECCCC
Confidence 4566777777778999988 789999974 33343 666 6668999999999885
No 219
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=84.75 E-value=1.1 Score=39.66 Aligned_cols=45 Identities=18% Similarity=0.269 Sum_probs=36.8
Q ss_pred HHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 51 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 51 ~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.+++.|++++++++|+.|+.. + + .|.+.+|+++.+|++|+++..
T Consensus 65 ~~~~~~~i~~~~~~~v~~id~~-~-~--~v~~~~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 65 DWYGEARIDMLTGPEVTALDVQ-T-R--TISLDDGTTLSADAIVIATGS 109 (410)
T ss_dssp THHHHTTCEEEESCCEEEEETT-T-T--EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHCCCEEEeCCEEEEEECC-C-C--EEEECCCCEEECCEEEEccCC
Confidence 4455689999999999999973 3 3 377778888999999999875
No 220
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=84.60 E-value=1 Score=42.50 Aligned_cols=45 Identities=13% Similarity=0.196 Sum_probs=35.3
Q ss_pred cCcEEEecceeeEEEecCC-CcEEEEEEeC---Cc--EEecCEEEEccChh
Q 022185 56 LGGEVRLNSRVQKIELNDD-GTVKNFLLTN---GN--VIDGDAYVFATPVD 100 (301)
Q Consensus 56 ~g~~I~l~~~V~~I~~~~~-g~v~~V~~~~---g~--~~~ad~VI~a~p~~ 100 (301)
.|++|++++.|++|..+++ +++++|++.+ |+ ++.||.||+++...
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~ 323 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAV 323 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTT
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCc
Confidence 3799999999999998543 3677888753 54 57899999998763
No 221
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=84.55 E-value=2.2 Score=40.58 Aligned_cols=50 Identities=24% Similarity=0.245 Sum_probs=38.4
Q ss_pred hHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC--cEEecCEEEEccChh
Q 022185 46 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVD 100 (301)
Q Consensus 46 ~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~~ 100 (301)
-..+.+.|+++|++|+++++|++|+. ++ +. ++ .+| +++++|.||+++...
T Consensus 576 ~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v~-~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 576 GWIHRTTLLSRGVKMIPGVSYQKIDD--DG-LH-VV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEET--TE-EE-EE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-EE-Ee-cCCeEEEEeCCEEEECCCcc
Confidence 34456788889999999999999984 34 32 43 577 578999999998763
No 222
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=83.92 E-value=1.3 Score=37.19 Aligned_cols=53 Identities=9% Similarity=0.270 Sum_probs=37.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 44 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 44 ~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
.+.+.+.+.+++.+.++..++ |..+....+. . .+.+.+++++++|.+|+++..
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~-~-~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQP-F-KLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSSS-E-EEEETTCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCCc-e-EEEECCCeEEEEeEEEEcccc
Confidence 356677777777888877654 6666654333 3 366667889999999999986
No 223
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=82.86 E-value=1.4 Score=35.68 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=30.2
Q ss_pred CCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 245 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
+..|+||.+||-. . . +....++.+|+.+|+.|++.+
T Consensus 196 t~~p~iya~G~~a-~-~-g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV-R-E-GDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT-S-C-CCHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc-c-C-ccHHHHHHHHHHHHHHHHhhc
Confidence 4689999999988 3 2 567788999999999998875
No 224
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=82.55 E-value=1.4 Score=39.39 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=37.1
Q ss_pred HHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 48 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 48 ~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.+.+++.|++++.+ +|++|+.+ + + .|++++|+++++|++|+++...
T Consensus 61 ~~~~~~~~~gv~~i~~-~v~~Id~~-~-~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 61 PLAPLLPKFNIEFINE-KAESIDPD-A-N--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp ESTTTGGGGTEEEECS-CEEEEETT-T-T--EEEETTCCEEECSEEEECCCCE
T ss_pred cHHHHHHHCCcEEEEe-EEEEEECC-C-C--EEEECCCCEEECCEEEEeCCCC
Confidence 3445566679999876 69999973 3 3 2788899999999999999864
No 225
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=81.89 E-value=1.3 Score=41.03 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCcEEEe--cceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 47 LPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 47 ~~l~~~l~~~g~~I~l--~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
+.+.+.|++.++++.. +.+|++|+. +| |++.+| ++++|.||+|+....
T Consensus 342 ~~y~~al~~~nV~lv~~~~~~I~~it~--~g----v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 342 TNYYETYNRDNVHLVDIREAPIQEVTP--EG----IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp SSHHHHTTSTTEEEEETTTSCEEEEET--TE----EEESSC-EEECSEEEECCCCBS
T ss_pred ccHHHHhcCCCEEEEecCCCCceEEcc--Ce----EEeCCC-eeecCEEEECCcccc
Confidence 3446677667888886 899999974 44 778899 899999999998865
No 226
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=81.61 E-value=2.1 Score=35.79 Aligned_cols=41 Identities=22% Similarity=0.279 Sum_probs=33.2
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
.++..++||.+||-+... +..+..|+..|+.||..|.+.+.
T Consensus 272 ~~t~~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 272 MQTSVAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp CBCSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHHHH
Confidence 345678999999987543 35789999999999999998764
No 227
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.24 E-value=1.3 Score=39.25 Aligned_cols=51 Identities=18% Similarity=0.323 Sum_probs=39.5
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.....+.+++.|++++++++|++|+.. + + .|.+.+|+++.+|.+|+++..
T Consensus 67 ~~~~~~~~~~~~~i~~~~~~~v~~id~~-~-~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 67 ICIRPAQFWEDKAVEMKLGAEVVSLDPA-A-H--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp GBSSCHHHHHHTTEEEEETCCEEEEETT-T-T--EEEETTSCEEEEEEEEECCCE
T ss_pred hccCCHHHHHHCCcEEEeCCEEEEEECC-C-C--EEEECCCCEEEeeEEEEccCC
Confidence 3333456666789999999999999873 3 3 267778889999999999864
No 228
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=81.01 E-value=1.6 Score=39.46 Aligned_cols=51 Identities=12% Similarity=0.035 Sum_probs=36.1
Q ss_pred HHHHHHHHH------cCcEEEecceeeEEEecCCCcEEEEEEe----------------CC--cEEecCEEEEccCh
Q 022185 47 LPIVEHIQS------LGGEVRLNSRVQKIELNDDGTVKNFLLT----------------NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 47 ~~l~~~l~~------~g~~I~l~~~V~~I~~~~~g~v~~V~~~----------------~g--~~~~ad~VI~a~p~ 99 (301)
+.|.+.+++ .|++|++++.|++|..+ +++.+|++. +| +++.+|.||.++..
T Consensus 250 ~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 250 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp HHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 344455545 78999999999999863 444445443 34 46899999999875
No 229
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=80.95 E-value=2.2 Score=37.69 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=36.7
Q ss_pred CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 022185 246 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKG 292 (301)
Q Consensus 246 p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~~~~~~ 292 (301)
..+|||.+||-+....+.....|...|..+|+.|...++...+...|
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~~~~~~~~ 344 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVPTKVDKY 344 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 57899999999874344567889999999999999998555544444
No 230
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=80.61 E-value=1.4 Score=39.04 Aligned_cols=43 Identities=19% Similarity=0.173 Sum_probs=34.9
Q ss_pred HHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 53 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 53 l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+++.|++++++++|+.|+.. + + .|++.+|+++++|++|+++..
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~-~-~--~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQ-A-H--TVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp TTSCSCEEEETCCEEEEETT-T-T--EEEETTSCEEECSEEEECCCE
T ss_pred HHHCCCEEEcCCEEEEEECC-C-C--EEEECCCCEEECCEEEECCCC
Confidence 44578999999999999973 3 2 267778888999999999875
No 231
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=80.53 E-value=0.79 Score=42.51 Aligned_cols=44 Identities=20% Similarity=0.276 Sum_probs=34.2
Q ss_pred HHHHcCcEEEe--cceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 52 HIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 52 ~l~~~g~~I~l--~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.|++.++++.. +.+|++|+. +| |++.||+++++|.||+++....
T Consensus 339 ~l~~~nV~lv~~~~~~I~~it~--~g----v~~~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 339 VYNRPNVEAVAIKENPIREVTA--KG----VVTEDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp GGGSTTEEEEETTTSCEEEECS--SE----EEETTCCEEECSEEEECCCBSC
T ss_pred HhcCCCEEEEeCCCCCccEEec--Ce----EEcCCCCEEECCEEEECCccCc
Confidence 34445777776 788998874 44 7788999999999999998754
No 232
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=79.96 E-value=2.1 Score=40.05 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=35.5
Q ss_pred HHcCcEEEecceeeEEEecC---CCcEEEEEEe--CCc--EEecC-EEEEccCh
Q 022185 54 QSLGGEVRLNSRVQKIELND---DGTVKNFLLT--NGN--VIDGD-AYVFATPV 99 (301)
Q Consensus 54 ~~~g~~I~l~~~V~~I~~~~---~g~v~~V~~~--~g~--~~~ad-~VI~a~p~ 99 (301)
++.+.+|++++.|++|..++ ++++++|++. +|+ ++.|+ .||++...
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa 291 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGS 291 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCc
Confidence 35789999999999999853 5678899875 464 46775 68987765
No 233
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=79.64 E-value=2.3 Score=39.24 Aligned_cols=52 Identities=15% Similarity=0.170 Sum_probs=38.1
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCC--CcEEEEEEe--CCcE--E---ecCEEEEccChh
Q 022185 49 IVEHIQSLGGEVRLNSRVQKIELNDD--GTVKNFLLT--NGNV--I---DGDAYVFATPVD 100 (301)
Q Consensus 49 l~~~l~~~g~~I~l~~~V~~I~~~~~--g~v~~V~~~--~g~~--~---~ad~VI~a~p~~ 100 (301)
+.+..++.|.+|++++.|++|..+++ +++++|++. +|+. + .++.||+++..-
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~ 260 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTI 260 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCccc
Confidence 44444567999999999999998543 378888875 4643 3 468899988764
No 234
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=79.51 E-value=1.6 Score=37.25 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=32.5
Q ss_pred CCCCCCCeEEee--ccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 022185 243 QRSPVEGFYLAG--DYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 285 (301)
Q Consensus 243 ~~~p~~~l~~aG--d~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~ 285 (301)
..+..++||.+| |.+.++ +..+.+|...|+.+|+.|.+.+..
T Consensus 310 ~~t~~~~vya~Gd~d~~~~~-~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGMA-SATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BBSSCTTEEECSSCGGGSTT-CSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCeEEeccccccccc-hhhhhhhHHHHHHHHHHHHHHHHh
Confidence 345678999999 555432 357888999999999999998754
No 235
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=78.79 E-value=2.4 Score=37.94 Aligned_cols=50 Identities=20% Similarity=0.210 Sum_probs=35.8
Q ss_pred HHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE-eCCc--EEecCEEEEccCh
Q 022185 48 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 99 (301)
Q Consensus 48 ~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 99 (301)
.+.+.+++.|+++++++.|+.|+.. ++.+. +.. .+|+ ++++|++|+++..
T Consensus 61 ~~~~~~~~~gv~~~~~~~v~~i~~~-~~~v~-~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 61 MTGEKMESRGVNVFSNTEITAIQPK-EHQVT-VKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp CCHHHHHHTTCEEEETEEEEEEETT-TTEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred CCHHHHHHCCCEEEECCEEEEEeCC-CCEEE-EEecCCCceEEEeCCEEEEcCCC
Confidence 3445666789999999999999873 44332 433 2364 3899999999875
No 236
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=78.34 E-value=2.4 Score=37.94 Aligned_cols=49 Identities=22% Similarity=0.327 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 47 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 47 ~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+++.|++++ ..+|++|+.+ +. .|++.+|+++.+|++|+++...
T Consensus 63 ~~l~~~~~~~gv~~~-~~~v~~id~~-~~---~V~~~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 63 FPIRHYVERKGIHFI-AQSAEQIDAE-AQ---NITLADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp EECHHHHHTTTCEEE-CSCEEEEETT-TT---EEEETTSCEEECSEEEECCCCE
T ss_pred HHHHHHHHHCCCEEE-EeEEEEEEcC-CC---EEEECCCCEEECCEEEECCCCC
Confidence 345567767899997 4699999873 33 3777788889999999998763
No 237
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=78.05 E-value=2.4 Score=38.40 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=34.9
Q ss_pred HHHHHHH-cCcEEEecceeeEEEecCCCcEEEEEE-eCCc--EEecCEEEEccCh
Q 022185 49 IVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 99 (301)
Q Consensus 49 l~~~l~~-~g~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 99 (301)
..+.+.+ .|++++++++|+.|+.. ++.+. +.. .+|+ ++++|.+|+++..
T Consensus 98 ~~~~~~~~~gv~~~~~~~v~~i~~~-~~~v~-v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 98 NVKTFRDKYGIDAKVRHEVTKVDTE-KKIVY-AEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CHHHHHHTTCCEEESSEEEEEEETT-TTEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred CHHHHHhhcCCEEEeCCEEEEEECC-CCEEE-EEEcCCCceEEEEcCEEEECCCC
Confidence 3445533 49999999999999974 44342 443 3465 7899999999875
No 238
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=77.55 E-value=3.3 Score=37.39 Aligned_cols=44 Identities=20% Similarity=0.249 Sum_probs=35.3
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhh
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 288 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~~ 288 (301)
.++..++||.+||-+... ..+..|+..|+.||..|...+...++
T Consensus 405 ~~Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~~~~~ 448 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAKAKAE 448 (456)
T ss_dssp CBCSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 346679999999987642 57899999999999999998755443
No 239
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=77.35 E-value=5.5 Score=39.97 Aligned_cols=51 Identities=16% Similarity=0.085 Sum_probs=37.5
Q ss_pred HHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe------CC---------cEEecCEEEEccCh
Q 022185 48 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT------NG---------NVIDGDAYVFATPV 99 (301)
Q Consensus 48 ~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~------~g---------~~~~ad~VI~a~p~ 99 (301)
.-.+.+++.|+++++++.|++|.. +++++++|++. +| ++++||.||+++..
T Consensus 375 ~e~~~~~~~Gv~~~~~~~~~~i~~-~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 375 EEVELAKEEKCEFLPFLSPRKVIV-KGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHHcCCEEEeCCCceEEEc-cCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 344567778999999999999987 35666656542 22 36899999998853
No 240
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=75.62 E-value=1.5 Score=39.77 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=33.9
Q ss_pred HHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe------------------CC--cEEecCEEEEccCh
Q 022185 50 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT------------------NG--NVIDGDAYVFATPV 99 (301)
Q Consensus 50 ~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~------------------~g--~~~~ad~VI~a~p~ 99 (301)
.+.+++.|+++++++.+++|.. +|++.+|++. +| +++++|.||+++..
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 3556678999999999999985 3444222221 23 36899999999875
No 241
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=75.55 E-value=2 Score=41.44 Aligned_cols=49 Identities=18% Similarity=0.176 Sum_probs=36.3
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE--eCC-cE------------------EecCEEEEccCh
Q 022185 47 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NV------------------IDGDAYVFATPV 99 (301)
Q Consensus 47 ~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~--~~g-~~------------------~~ad~VI~a~p~ 99 (301)
..+.+.|++.|++|++++.|++|.. ++ +. +.. .++ ++ +++|.||+++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~--~~-v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEP--GR-ME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET--TE-EE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEEC--Ce-EE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 5677788889999999999999984 33 32 332 233 32 899999999875
No 242
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=75.23 E-value=3 Score=37.92 Aligned_cols=47 Identities=34% Similarity=0.406 Sum_probs=35.0
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe-C--CcEEecCEEEEccCh
Q 022185 49 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GNVIDGDAYVFATPV 99 (301)
Q Consensus 49 l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~-~--g~~~~ad~VI~a~p~ 99 (301)
+.+.+++.|++++++++|+.|+.. ++.+ ++. + ++++++|++|+++..
T Consensus 98 ~~~~~~~~gv~v~~~~~v~~i~~~-~~~v---~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 98 DKEELESLGAKVYMESPVQSIDYD-AKTV---TALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp CHHHHHHTTCEEETTCCEEEEETT-TTEE---EEEETTEEEEEECSEEEECCCE
T ss_pred CHHHHHhCCCEEEeCCEEEEEECC-CCEE---EEEeCCcEEEEECCEEEECCCC
Confidence 345566789999999999999973 4433 333 4 357899999999875
No 243
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=75.18 E-value=1.7 Score=39.62 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=33.8
Q ss_pred HcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 55 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 55 ~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.|++++++++|++|+.. +. .|++.+|+++.+|++|+|+..
T Consensus 102 ~~gv~~~~g~~v~~id~~-~~---~V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVR-DN---MVKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGG-GT---EEEETTSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECC-CC---EEEECCCCEEECCEEEECCCC
Confidence 468899999999999974 33 267778888999999999875
No 244
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=74.51 E-value=2.5 Score=39.61 Aligned_cols=46 Identities=11% Similarity=0.018 Sum_probs=35.5
Q ss_pred HHcCcEEEecceeeEEEecCC---CcEEEEEEe--CCc--EEec-CEEEEccCh
Q 022185 54 QSLGGEVRLNSRVQKIELNDD---GTVKNFLLT--NGN--VIDG-DAYVFATPV 99 (301)
Q Consensus 54 ~~~g~~I~l~~~V~~I~~~~~---g~v~~V~~~--~g~--~~~a-d~VI~a~p~ 99 (301)
++.|.+|++++.|++|..+++ +++++|++. +|+ ++.| +.||+++..
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~ 295 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGS 295 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCT
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCC
Confidence 356899999999999998532 468888764 564 4678 889998876
No 245
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=74.31 E-value=5.8 Score=36.18 Aligned_cols=55 Identities=11% Similarity=-0.081 Sum_probs=36.9
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCc------EEEEEEeCC-----cEEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT------VKNFLLTNG-----NVIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~------v~~V~~~~g-----~~~~ad~VI~a~p~ 99 (301)
+.+-|....++.+..|+++++|++|+..+++. ...|++.++ +++.|+.||+++..
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 44444444444567899999999999754321 234666543 35889999999874
No 246
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=73.99 E-value=1.9 Score=40.24 Aligned_cols=47 Identities=13% Similarity=0.136 Sum_probs=34.9
Q ss_pred HHHcCcEEEecceeeEEEec---CC-CcEEEEEEeC--C-c--EEec-CEEEEccCh
Q 022185 53 IQSLGGEVRLNSRVQKIELN---DD-GTVKNFLLTN--G-N--VIDG-DAYVFATPV 99 (301)
Q Consensus 53 l~~~g~~I~l~~~V~~I~~~---~~-g~v~~V~~~~--g-~--~~~a-d~VI~a~p~ 99 (301)
+++.+.+|++++.|++|..+ ++ +++++|++.+ | + ++.| +.||++...
T Consensus 218 ~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGa 274 (566)
T 3fim_B 218 QSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGS 274 (566)
T ss_dssp TTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHH
T ss_pred ccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCC
Confidence 34578999999999999985 13 5677888753 4 3 4677 679988765
No 247
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=73.22 E-value=4.8 Score=35.44 Aligned_cols=50 Identities=24% Similarity=0.272 Sum_probs=38.7
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.....+.+++.|+++++ ++|++|+.. +. .|++.+|+++.+|.+|+++..
T Consensus 59 ~~~~~~~~~~~~~i~~~~-~~v~~id~~-~~---~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 59 LMFRPEKFFQDQAIELIS-DRMVSIDRE-GR---KLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp SBSSCHHHHHHTTEEEEC-CCEEEEETT-TT---EEEESSSCEEECSEEEECCCE
T ss_pred ccCCCHHHHHhCCCEEEE-EEEEEEECC-CC---EEEECCCCEEECCEEEEeeCC
Confidence 333445666678999999 999999973 33 277778888999999999875
No 248
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=73.22 E-value=3.9 Score=36.66 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=36.1
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE-eCCcEEecCEEEEccCh
Q 022185 49 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGNVIDGDAYVFATPV 99 (301)
Q Consensus 49 l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~~~~ad~VI~a~p~ 99 (301)
+.+.+++.|.+++++++|++|+.. ++.+. +.. .+++++++|.+|+++..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~-~~~v~-v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVE-NQLIA-WTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETT-TTEEE-EEETTEEEEEECSEEEECCCC
T ss_pred CHHHHHHCCCEEEECCEEEEEECC-CCEEE-EEecCceEEEEcCEEEECCCc
Confidence 345666789999999999999974 44332 431 24567899999999876
No 249
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=72.71 E-value=2.6 Score=37.76 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=35.7
Q ss_pred HHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEe-C--CcEEecCEEEEccCh
Q 022185 48 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GNVIDGDAYVFATPV 99 (301)
Q Consensus 48 ~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~-~--g~~~~ad~VI~a~p~ 99 (301)
.+.+.+++.|++++++++|+.|+.. ++.+. +... + ++++++|.+|+++..
T Consensus 63 ~~~~~~~~~gv~~~~~~~v~~i~~~-~~~v~-v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 63 SSPEELSNLGANVQMRHQVTNVDPE-TKTIK-VKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp CCHHHHHHTTCEEEESEEEEEEEGG-GTEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHHcCCEEEeCCEEEEEEcC-CCEEE-EEecCCCceEEEECCEEEEccCC
Confidence 3345666789999999999999874 44342 4321 2 457999999999874
No 250
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=72.44 E-value=5.9 Score=35.45 Aligned_cols=48 Identities=10% Similarity=0.005 Sum_probs=34.5
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCC-cEEecCEEEEccCh
Q 022185 47 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPV 99 (301)
Q Consensus 47 ~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g-~~~~ad~VI~a~p~ 99 (301)
+.+.+.+++.|++++.++.+. +. ++.+ .|++.+| +++++|.+|+++..
T Consensus 95 ~~~~~~~~~~gv~~~~g~~~~-id---~~~v-~V~~~~G~~~i~~d~lViATGs 143 (455)
T 1ebd_A 95 GGVEGLLKGNKVEIVKGEAYF-VD---ANTV-RVVNGDSAQTYTFKNAIIATGS 143 (455)
T ss_dssp HHHHHHHHTTTCEEEESEEEE-EE---TTEE-EEEETTEEEEEECSEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEEEEEE-cc---CCeE-EEEeCCCcEEEEeCEEEEecCC
Confidence 334556667899999999764 43 2334 3666667 67999999999875
No 251
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=71.80 E-value=3.4 Score=38.58 Aligned_cols=45 Identities=16% Similarity=0.205 Sum_probs=34.4
Q ss_pred HcCcEEEecceeeEEEecC-CCcEEEEEEe--CCc--EEec-CEEEEccCh
Q 022185 55 SLGGEVRLNSRVQKIELND-DGTVKNFLLT--NGN--VIDG-DAYVFATPV 99 (301)
Q Consensus 55 ~~g~~I~l~~~V~~I~~~~-~g~v~~V~~~--~g~--~~~a-d~VI~a~p~ 99 (301)
+.+.+|++++.|++|..++ ++++++|++. +|+ ++.| +.||+++..
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa 268 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGV 268 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccc
Confidence 4689999999999999853 5678888875 364 3567 569988765
No 252
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=71.30 E-value=5 Score=37.32 Aligned_cols=51 Identities=16% Similarity=0.165 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEE-eCCc--EEecCEEEEccCh
Q 022185 47 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 99 (301)
Q Consensus 47 ~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 99 (301)
..+....++.|.+++++++|++|+.. ++.+. +.. .+|+ ++.+|.+|+++..
T Consensus 97 ~~~~~~~~~~gi~v~~~~~V~~id~~-~~~v~-v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 97 QTVERMSKRFNLDIRVLSEVVKINKE-EKTIT-IKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp SCHHHHHHHTTCEEECSEEEEEEETT-TTEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECC-CCEEE-EeecCCCCEEEEeCCEEEECCCC
Confidence 34444555679999999999999974 44342 433 3465 6899999999875
No 253
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=70.65 E-value=4.8 Score=36.29 Aligned_cols=37 Identities=16% Similarity=0.039 Sum_probs=30.2
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 313 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 313 FNSKFPHIKVVGDVTFG--PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 34567899999998864 24678899999999999986
No 254
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=70.56 E-value=6.2 Score=35.40 Aligned_cols=37 Identities=27% Similarity=0.298 Sum_probs=30.1
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 297 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 297 MRTNVGHIYAIGDVNGL--LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp SBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEeECcCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 34667999999998764 24678899999999999975
No 255
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=70.14 E-value=7.6 Score=33.92 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=33.9
Q ss_pred HHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 52 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 52 ~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
.+.++|+++..+ +|++|+.+ + +. |++.+|+++.+|++|+++...
T Consensus 64 ~~~~~gv~~i~~-~v~~id~~-~-~~--v~~~~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 64 GLRAHGIQVVHD-SALGIDPD-K-KL--VKTAGGAEFAYDRCVVAPGID 107 (401)
T ss_dssp HHHHTTCEEECS-CEEEEETT-T-TE--EEETTSCEEECSEEEECCCEE
T ss_pred HHHHCCCEEEEe-EEEEEEcc-C-cE--EEecccceeecceeeeccCCc
Confidence 344679998765 69999973 3 33 677888899999999998763
No 256
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=70.06 E-value=4.5 Score=36.26 Aligned_cols=38 Identities=16% Similarity=0.474 Sum_probs=29.5
Q ss_pred CCCCCeEEeeccccCC-CCC--chhHHHHHHHHHHHHHHHH
Q 022185 245 SPVEGFYLAGDYTKQK-YLA--SMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~-~~~--~v~gA~~SG~~aA~~i~~~ 282 (301)
.+++|||+||+-+.-. +.| ++..|+.+|+.|++.+.+.
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~ 442 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGEN 442 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4789999999976522 223 5788999999999988654
No 257
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=68.95 E-value=2.4 Score=39.31 Aligned_cols=45 Identities=22% Similarity=0.193 Sum_probs=34.2
Q ss_pred HHHHHHcCcEEE--ecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 50 VEHIQSLGGEVR--LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 50 ~~~l~~~g~~I~--l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.+.|++.++++. ...+|++|+. +| |++.+| ++++|.||+++....
T Consensus 350 ~~al~~~~V~lvd~~~~~I~~it~--~g----v~~~dG-~~~~D~iI~ATGf~~ 396 (549)
T 4ap3_A 350 YETYNRDNVELVDLRSTPIVGMDE--TG----IVTTGA-HYDLDMIVLATGFDA 396 (549)
T ss_dssp GGGGGSTTEEEEETTTSCEEEEET--TE----EEESSC-EEECSEEEECCCEEE
T ss_pred HHHhcCCCEEEEeCCCCCceEEeC--Cc----EEeCCC-ceecCEEEECCcccc
Confidence 355555677776 3688999984 44 778899 899999999998754
No 258
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=68.02 E-value=3.4 Score=37.02 Aligned_cols=42 Identities=24% Similarity=0.302 Sum_probs=33.1
Q ss_pred HHcCcEEEecceeeEEEecCCCcEEEEEEeCC-cEEecCEEEEccCh
Q 022185 54 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPV 99 (301)
Q Consensus 54 ~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g-~~~~ad~VI~a~p~ 99 (301)
++.|++++++++|++|+.+ + . .|.+.+| +++.+|.+|+++..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~--~-~-~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTG--Y-V-RVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHTTCEEETTCEEEEECSS--E-E-EEECSSSEEEEECSEEEECCCE
T ss_pred HhcCcEEEecCEEEEEecC--C-C-EEEECCceEEEEcCEEEECCCC
Confidence 5689999999999999762 2 2 3666666 47899999999874
No 259
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=67.02 E-value=12 Score=31.11 Aligned_cols=41 Identities=22% Similarity=0.273 Sum_probs=31.6
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
.+|..|+||.|||-+...+ ..+.-|+-.|..||..+.+.+.
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp TBCSSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999876532 2466688899999999987764
No 260
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=66.90 E-value=5.8 Score=36.59 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=31.7
Q ss_pred HcCcEEEecceeeEEEecCCCcEEEEEE-eCCc--EEecCEEEEccCh
Q 022185 55 SLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 99 (301)
Q Consensus 55 ~~g~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 99 (301)
+.|++++++++|++|+.. ++.+. +.. .+|+ ++.+|++|+++..
T Consensus 70 ~~~i~~~~~~~V~~id~~-~~~v~-~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRA-AKLVT-VRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHCCEEETTEEEEEEETT-TTEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECC-CCEEE-EEecCCCCeEEEECCEEEECCCC
Confidence 469999999999999973 44332 332 2243 6899999999875
No 261
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=66.74 E-value=7.4 Score=36.97 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=28.0
Q ss_pred CCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHHHh
Q 022185 248 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~~~ 283 (301)
+|++++||..+.-.| .|++.+++.+...|.+|..-+
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 689999998765443 488999999988888876544
No 262
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=66.40 E-value=1.8 Score=38.55 Aligned_cols=49 Identities=18% Similarity=0.255 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChh
Q 022185 47 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 100 (301)
Q Consensus 47 ~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 100 (301)
..+.+.+++.|++++.+ +|+.|+.+ +. .|++.+|+++.+|++|+++...
T Consensus 60 ~~~~~~~~~~gv~~~~~-~v~~id~~-~~---~v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 60 VPLAPLLPKFNIEFINE-KAESIDPD-AN---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp EESTTTGGGGTEEEECS-CEEEEETT-TT---EEEETTCCEEECSEEEECCCCE
T ss_pred HHHHHHHHhcCCEEEEE-EEEEEECC-CC---EEEECCCcEEECCEEEEcCCcc
Confidence 33445566689999875 89999873 33 2677788889999999998653
No 263
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=65.80 E-value=8.7 Score=34.46 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=29.7
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +....-|...|+.+|+.|..
T Consensus 305 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVIPG--PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CBCSSTTEEECSTTSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 34567899999998764 24677899999999999975
No 264
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=64.10 E-value=6.4 Score=35.87 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=36.1
Q ss_pred cCcEEEecceeeEEEecCCCcEEEEEEeC-C--cEEecCEEEEccChhhHhhc
Q 022185 56 LGGEVRLNSRVQKIELNDDGTVKNFLLTN-G--NVIDGDAYVFATPVDILKLQ 105 (301)
Q Consensus 56 ~g~~I~l~~~V~~I~~~~~g~v~~V~~~~-g--~~~~ad~VI~a~p~~~l~~l 105 (301)
.+..|++++.|++|..+ ++++++|.+.+ + ..+.|+.||++...-...+|
T Consensus 224 ~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~L 275 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPAL 275 (526)
T ss_dssp TTEEEECSCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHH
T ss_pred CCeEEEeCCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcch
Confidence 57899999999999984 66787787653 2 34678999998765333333
No 265
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=63.23 E-value=7.9 Score=34.96 Aligned_cols=37 Identities=27% Similarity=0.305 Sum_probs=30.0
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 312 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVGQ--PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEcccCC--CccHHHHHHHHHHHHHHHcC
Confidence 34667899999998864 24678899999999999974
No 266
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=61.94 E-value=5.2 Score=35.37 Aligned_cols=36 Identities=28% Similarity=0.466 Sum_probs=27.3
Q ss_pred CCCCCeEEeeccccCC-CCC--chhHHHHHHHHHHHHHH
Q 022185 245 SPVEGFYLAGDYTKQK-YLA--SMEGAVLSGKLCAQAIV 280 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~-~~~--~v~gA~~SG~~aA~~i~ 280 (301)
..+|||||||+-+.-. +.| .+..|+.||..|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 3579999999965432 222 47899999999999874
No 267
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=61.31 E-value=12 Score=33.57 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=30.3
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. .+.....|...|+.+|+.|..
T Consensus 302 ~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 302 FETSIPDVYAIGDVVDK-GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp SBCSSTTEEECGGGBSS-SCSCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEeeccCCC-CCccHhHHHHHHHHHHHHHcC
Confidence 34667899999998862 225678899999999999975
No 268
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=60.30 E-value=13 Score=33.42 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=30.0
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|+.
T Consensus 310 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVGK--VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CBCSSTTEEECGGGTTS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEecCCC--cccHHHHHHHHHHHHHHhcC
Confidence 34667899999998653 24678899999999999975
No 269
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=60.28 E-value=9 Score=34.43 Aligned_cols=43 Identities=21% Similarity=0.211 Sum_probs=29.7
Q ss_pred HcCcEEEecceeeEEEecCCCcEEEEEE-eCCc--EEecCEEEEccCh
Q 022185 55 SLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 99 (301)
Q Consensus 55 ~~g~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 99 (301)
+.|.+++++++|++|+.. ++.+. +.. .+|+ ++.+|.+|+++..
T Consensus 78 ~~gi~~~~~~~V~~id~~-~~~v~-~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRA-AHTVE-IENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---CEEECSEEEEEEETT-TTEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECC-CCEEE-EeecCCCCEEEEECCEEEEeCCC
Confidence 368999999999999974 44332 332 2354 7899999999875
No 270
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=59.02 E-value=13 Score=32.37 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=33.4
Q ss_pred HHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 51 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 51 ~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.+++.|++++++++|+.|+.. +. . |++. ++++++|.+|+++..
T Consensus 68 ~~~~~~~v~~~~~~~v~~i~~~-~~-~--v~~~-~~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 68 AMAEQLNARILTHTRVTGIDPG-HQ-R--IWIG-EEEVRYRDLVLAWGA 111 (384)
T ss_dssp HHHHHTTCEEECSCCCCEEEGG-GT-E--EEET-TEEEECSEEEECCCE
T ss_pred HHHHhCCcEEEeCCEEEEEECC-CC-E--EEEC-CcEEECCEEEEeCCC
Confidence 3445689999999999999873 33 2 5554 457999999999875
No 271
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=58.89 E-value=9.6 Score=35.13 Aligned_cols=40 Identities=25% Similarity=0.356 Sum_probs=30.3
Q ss_pred CCCCCCeEEeeccccCCC-C------CchhHHHHHHHHHHHHHHHHh
Q 022185 244 RSPVEGFYLAGDYTKQKY-L------ASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~~~-~------~~v~gA~~SG~~aA~~i~~~~ 283 (301)
+++++|||.||+-.+.+. . .++-.|+..|++|++.+.+..
T Consensus 364 ~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 364 RTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 478999999999874332 1 146678889999999987654
No 272
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=58.89 E-value=8.2 Score=35.05 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=31.0
Q ss_pred CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 022185 246 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 285 (301)
Q Consensus 246 p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~ 285 (301)
..++||.+||-... ..+..|+..|+.+|..|...++.
T Consensus 342 s~~~vya~GD~~~~---~~~~~A~~~g~~aa~~i~~~lg~ 378 (493)
T 1y56_A 342 IKDGIYVAGSAVSI---KPHYANYLEGKLVGAYILKEFGY 378 (493)
T ss_dssp EETTEEECSTTTCC---CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeccCCc---cCHHHHHHHHHHHHHHHHHHcCC
Confidence 35799999998865 46788999999999999987754
No 273
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=58.60 E-value=11 Score=34.07 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=29.8
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 305 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 305 SRTLATGIYAAGDCTGL--LPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp SBCSSTTEEECSGGGTS--CSCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 34567899999998864 24677899999999999975
No 274
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=57.89 E-value=12 Score=33.96 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=30.6
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.||..|..
T Consensus 301 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 301 LQTSVDHIFVAGDANNT--LTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp CBCSSTTEEECGGGGTS--SCSHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEEecCCC--CccHHHHHHHHHHHHHHHcC
Confidence 45667999999998864 24678899999999999986
No 275
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=57.48 E-value=18 Score=32.23 Aligned_cols=47 Identities=15% Similarity=0.021 Sum_probs=32.9
Q ss_pred HHHHcCcEEEecceeeEEEecCCCcEEEEEEe---CCcEEecCEEEEccChh
Q 022185 52 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVD 100 (301)
Q Consensus 52 ~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~~~~ad~VI~a~p~~ 100 (301)
.+++.|++++++++|++|+.. ...+. +... ++.++.+|++|+++...
T Consensus 66 ~~~~~~i~~~~~~~V~~id~~-~~~~~-~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 66 FYDRKQITVKTYHEVIAINDE-RQTVS-VLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHHCCEEEETEEEEEEETT-TTEEE-EEETTTTEEEEEECSEEEECCCEE
T ss_pred HHHhcCCEEEeCCeEEEEEcc-CcEEE-EEeccCCceEEEEcCEEEECCCCc
Confidence 344579999999999999973 33332 3322 22457899999998763
No 276
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=57.18 E-value=9 Score=35.26 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=33.3
Q ss_pred HHHHHHHHcCcEEE--ecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhh
Q 022185 48 PIVEHIQSLGGEVR--LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 48 ~l~~~l~~~g~~I~--l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
.+.+.|++.++++. .+++|++|+. +| |++.| +++++|.||+++....
T Consensus 343 ~y~~~~~~~~v~lv~~~~~~i~~i~~--~g----v~~~d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 343 DYYEMFNRDNVHLVDTLSAPIETITP--RG----VRTSE-REYELDSLVLATGFDA 391 (542)
T ss_dssp SHHHHTTSTTEEEEETTTSCEEEECS--SE----EEESS-CEEECSEEEECCCCCC
T ss_pred cHHHHhCCCCEEEEecCCCCceEEcC--Ce----EEeCC-eEEecCEEEEcCCccc
Confidence 34555654455554 3778988863 33 67778 8899999999998754
No 277
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=56.93 E-value=12 Score=33.48 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=30.7
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|+..
T Consensus 294 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 294 SRTSTPGIYALGDVTDR--VQLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp CBCSSTTEEECSGGGSS--CCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCCEEEEEecCCC--CCChHHHHHHHHHHHHHHcCC
Confidence 45668999999998763 246788999999999999753
No 278
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=56.62 E-value=12 Score=33.50 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=30.9
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|+..
T Consensus 296 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 296 MKTNIPNVFATGDANGL--APYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CBCSSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHhCC
Confidence 44667999999998864 257788999999999999853
No 279
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=55.98 E-value=13 Score=33.51 Aligned_cols=38 Identities=24% Similarity=0.349 Sum_probs=30.6
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|+..
T Consensus 319 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 319 QNTNVKGIYAVGDVCGK--ALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHcCC
Confidence 35667999999998843 357888999999999999754
No 280
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=55.67 E-value=5.5 Score=35.42 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=23.3
Q ss_pred CCCCeEEeeccccCC-CCC--chhHHHHHHHHHHHH
Q 022185 246 PVEGFYLAGDYTKQK-YLA--SMEGAVLSGKLCAQA 278 (301)
Q Consensus 246 p~~~l~~aGd~~~~~-~~~--~v~gA~~SG~~aA~~ 278 (301)
-++||||||+-+.-. +.| .+..|..||..|++.
T Consensus 381 ~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 381 EVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 468999999543211 112 588999999988875
No 281
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=53.15 E-value=15 Score=34.63 Aligned_cols=40 Identities=23% Similarity=0.353 Sum_probs=26.5
Q ss_pred CCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 244 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
.++++|||.||+-++.+.....-+++..|+.+++++.+..
T Consensus 428 ~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~ 467 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFI 467 (643)
T ss_dssp BCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHH
Confidence 4789999999998765422222346666777766665543
No 282
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=52.88 E-value=15 Score=32.94 Aligned_cols=37 Identities=24% Similarity=0.298 Sum_probs=30.2
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 306 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 306 CATSVPGVYAIGDVVRG--AMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEEccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 44667999999998843 24688899999999999975
No 283
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=52.71 E-value=15 Score=33.06 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=30.4
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|+..
T Consensus 314 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHHcCC
Confidence 44668999999998763 256788999999999999853
No 284
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=52.69 E-value=14 Score=33.02 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=29.7
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 290 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 290 LRTRVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 34557899999998764 24677899999999999986
No 285
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=52.69 E-value=16 Score=32.90 Aligned_cols=38 Identities=26% Similarity=0.316 Sum_probs=30.4
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. .+...+.|...|+.+|+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 314 EATNVANIYAVGDIIYG-KPELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp CBCSSTTEEECSTTBTT-SCCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEcccCC-CCccHHHHHHHHHHHHHHHcC
Confidence 45678999999998742 235778899999999999974
No 286
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=51.79 E-value=17 Score=32.86 Aligned_cols=39 Identities=26% Similarity=0.323 Sum_probs=30.6
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
.++..++||.+||-+.. .+...+.|...|+.+|+.|+..
T Consensus 314 ~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 314 EATSVPHIYAIGDVAEG-RPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp SBCSSTTEEECGGGBTT-CCCCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEeEEecCC-CCcchhHHHHHHHHHHHHHcCC
Confidence 45668999999998743 2346788999999999999753
No 287
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=51.35 E-value=14 Score=33.36 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=30.3
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 326 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVRG--PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEecCCC--ccchhHHHHHHHHHHHHHcC
Confidence 45667999999998743 25788999999999999975
No 288
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=51.04 E-value=17 Score=32.40 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=30.1
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 291 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 291 QNTNIEGIYAVGDNTGA--VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp SBCSSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 34667899999998753 24678899999999999975
No 289
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=50.80 E-value=30 Score=28.68 Aligned_cols=51 Identities=14% Similarity=0.155 Sum_probs=37.3
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccCh
Q 022185 45 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 45 l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 99 (301)
+.........+.+..+..+..+...... .. . +...+++++++|++|+++..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 64 LSTKMFEHAKKFGAVYQYGDIKSVEDKG-EY-K--VINFGNKELTAKAVIIATGA 114 (312)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCEEEECS-SC-E--EEECSSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHhhccccccceeeeeeeeee-cc-e--eeccCCeEEEeceeEEcccC
Confidence 4555666666788899988888777753 33 2 34457788999999999985
No 290
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=50.55 E-value=9.2 Score=35.50 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=29.0
Q ss_pred CCCCCeEEeeccccCC----CCC--chhHHHHHHHHHHHHHHHH
Q 022185 245 SPVEGFYLAGDYTKQK----YLA--SMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~----~~~--~v~gA~~SG~~aA~~i~~~ 282 (301)
+|++|||.||+-+..- +++ ++-.|+.+|++|++.+.+.
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 7899999999976422 222 4677899999999998653
No 291
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=50.26 E-value=18 Score=33.07 Aligned_cols=38 Identities=26% Similarity=0.371 Sum_probs=30.2
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+... +.....|...|+.+|+.|+.
T Consensus 342 ~~Ts~~~IyA~GD~~~g~-~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 342 EQTNVPYIYAIGDILEDK-VELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp SBCSSTTEEECGGGBSSS-CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEeccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 346679999999987422 35778899999999999974
No 292
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=48.93 E-value=11 Score=34.75 Aligned_cols=39 Identities=21% Similarity=0.505 Sum_probs=29.3
Q ss_pred CCCCCCeEEeeccccCCC----CC--chhHHHHHHHHHHHHHHHH
Q 022185 244 RSPVEGFYLAGDYTKQKY----LA--SMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~~~----~~--~v~gA~~SG~~aA~~i~~~ 282 (301)
.+|++|||.||+-+..-+ ++ ++-.|+.+|++|++.+.+.
T Consensus 518 g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~ 562 (566)
T 1qo8_A 518 SKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKH 562 (566)
T ss_dssp SCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 368999999999764222 22 4667899999999998754
No 293
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=48.83 E-value=16 Score=32.72 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=30.1
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 308 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVAG--PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEeeecCCC--CccHHHHHHHHHHHHHHhcC
Confidence 44667899999998764 24678899999999999975
No 294
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=48.37 E-value=15 Score=32.07 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=30.7
Q ss_pred CCCCCCCeEEeeccccCCC--CCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKY--LASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~--~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.... ++....|...|+.||+.|+.
T Consensus 253 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 253 METSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp CBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 3566799999999876321 25678899999999999975
No 295
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=48.36 E-value=17 Score=34.39 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=27.5
Q ss_pred CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 246 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 246 p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
.++||||||+-.... |.+-|+.+|..|+..+....
T Consensus 377 ~~~gLf~AGqi~g~~---Gy~eA~a~G~~AG~naa~~~ 411 (641)
T 3cp8_A 377 PVENLFFAGQINGTS---GYEEAAAQGLMAGINAVRKI 411 (641)
T ss_dssp SSBTEEECSGGGTBC---CHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEEeecCCc---cHHHHHHHHHHHHHHHHHHh
Confidence 478999999988763 56678888999888876654
No 296
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=48.25 E-value=20 Score=35.84 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=32.7
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
.++..++||.+||-+.. +..+..|+..|+.||..|...+.
T Consensus 469 ~~Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CBCSSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHHH
Confidence 34667899999998863 25788899999999999998664
No 297
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=47.84 E-value=19 Score=33.59 Aligned_cols=41 Identities=17% Similarity=0.387 Sum_probs=30.1
Q ss_pred CCCCCCCeEEeeccccCCC-----CC--chhHHHHHHHHHHHHHHHHh
Q 022185 243 QRSPVEGFYLAGDYTKQKY-----LA--SMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~-----~~--~v~gA~~SG~~aA~~i~~~~ 283 (301)
.+++++|||.||+-.+.+. .+ ++-.|+..|++|++.+.+..
T Consensus 368 ~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 368 CETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp SBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 3568999999999764321 11 36678889999999987664
No 298
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=47.75 E-value=21 Score=32.36 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=30.1
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|+.
T Consensus 318 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 318 SRTNVPNIYAIGDITDR--LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 34667899999998853 24678899999999999974
No 299
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=47.05 E-value=21 Score=31.91 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=29.4
Q ss_pred CCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 244 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
++..++||.+||-... +.....|...|+.+|..|+.
T Consensus 291 ~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 291 NTNVPGVYALGDITGR--DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp BCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 4567899999998753 24678899999999999974
No 300
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=47.04 E-value=22 Score=32.17 Aligned_cols=37 Identities=19% Similarity=0.340 Sum_probs=30.3
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 314 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTDR--VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 34667899999998853 24788999999999999975
No 301
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=46.99 E-value=12 Score=34.71 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=29.1
Q ss_pred CCCCCCeEEeeccccCCC----CC--chhHHHHHHHHHHHHHHHH
Q 022185 244 RSPVEGFYLAGDYTKQKY----LA--SMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~~~----~~--~v~gA~~SG~~aA~~i~~~ 282 (301)
.+|++|||.||+-+..-+ .+ ++-.|+.+|++|++.+.+.
T Consensus 523 g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 523 KQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp SCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 368999999999764222 22 4667899999999998654
No 302
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=46.36 E-value=17 Score=31.16 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=29.1
Q ss_pred CCCCeEEeecccc---CCC-C-CchhHHHHHHHHHHHHHHHHhh
Q 022185 246 PVEGFYLAGDYTK---QKY-L-ASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 246 p~~~l~~aGd~~~---~~~-~-~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
-+|+||++|-... ... + .-+-|-+.||+.||+.|++++.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 3689999997542 111 1 2577888999999999999874
No 303
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=44.95 E-value=20 Score=32.00 Aligned_cols=37 Identities=27% Similarity=0.280 Sum_probs=30.0
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+... .....|...|+.+|..|+.
T Consensus 297 ~~t~~~~iya~GD~~~~~--~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCTDQP--QFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp CBCSSTTEEECSTTBSSC--CCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCCc--ccHHHHHHHHHHHHHHHcC
Confidence 345678999999988642 4678899999999999874
No 304
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=44.78 E-value=20 Score=32.05 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=29.9
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 297 ~~t~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 297 METSVPGVYAIGDAARP--PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 34567899999998854 24678899999999999974
No 305
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=44.66 E-value=14 Score=33.59 Aligned_cols=38 Identities=21% Similarity=0.442 Sum_probs=28.1
Q ss_pred CCCCCCeEEeeccccC----CCCC--chhHHHHHHHHHHHHHHH
Q 022185 244 RSPVEGFYLAGDYTKQ----KYLA--SMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~----~~~~--~v~gA~~SG~~aA~~i~~ 281 (301)
.+||+|||.||+-++. +|++ ++-.|+.+|++|++.+.+
T Consensus 465 g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 465 GEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp SSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 3689999999986542 1222 466789999999998753
No 306
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=44.16 E-value=19 Score=35.76 Aligned_cols=40 Identities=20% Similarity=0.169 Sum_probs=32.8
Q ss_pred CCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhhh
Q 022185 245 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 287 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~~~ 287 (301)
+..++||.+||-... ..+..|+..|+.||..|...++...
T Consensus 408 ts~p~IyAaGD~a~~---~~l~~A~~~G~~aA~~i~~~lg~~~ 447 (965)
T 2gag_A 408 DAVANQHLAGAMTGR---LDTASALSTGAATGAAAATAAGFAT 447 (965)
T ss_dssp SCCTTEEECGGGGTC---CSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCEEEEEecCCc---hhHHHHHHHHHHHHHHHHHHcCCCc
Confidence 557899999998765 2456899999999999999887544
No 307
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=43.68 E-value=27 Score=32.42 Aligned_cols=39 Identities=21% Similarity=0.322 Sum_probs=30.5
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
.++..++||.+||-.... +.....|+..|+.+|+.|+..
T Consensus 421 ~~ts~~~VyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINAGK-PQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp SBCSSTTEEECGGGBTTS-CCCHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCEEEEeeecCCC-CccHHHHHHhHHHHHHHHhcC
Confidence 346678999999985432 246788999999999999864
No 308
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=43.59 E-value=17 Score=32.32 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=26.2
Q ss_pred CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 246 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 246 p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
.++||||||+-+... |.+-|..+|..|+..+....
T Consensus 327 ~~~~Lf~AGqi~G~~---Gy~eAaa~Gl~AG~naa~~~ 361 (443)
T 3g5s_A 327 EAEGLYAAGVLAGVE---GYLESAATGFLAGLNAARKA 361 (443)
T ss_dssp TEEEEEECGGGGTBC---SHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECccccccH---HHHHHHHhHHHHHHHHHHHh
Confidence 478999999988763 45566678888887766554
No 309
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=43.47 E-value=22 Score=33.62 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=26.5
Q ss_pred CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 246 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 246 p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
.++||||||+-.... |-+-|+.+|..|+.......
T Consensus 383 ~~~gLf~AGqinGtt---GYeEAaaqGl~AG~nAa~~~ 417 (651)
T 3ces_A 383 FIQGLFFAGQINGTT---GYEEAAAQGLLAGLNAARLS 417 (651)
T ss_dssp SSBTEEECSGGGTCC---CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecCCc---ChHHHHHHHHHHHHHHHHHh
Confidence 478999999887663 55677788888887766543
No 310
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=42.74 E-value=26 Score=33.16 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=29.3
Q ss_pred CCCCCCCeEEeeccccCC-C----C--CchhHHHHHHHHHHHHHHHHh
Q 022185 243 QRSPVEGFYLAGDYTKQK-Y----L--ASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~-~----~--~~v~gA~~SG~~aA~~i~~~~ 283 (301)
.+++++|||.||+-.+.+ + . .++-.|+..|++|++.+.+..
T Consensus 381 ~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 381 GEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp SBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 345899999999964322 1 1 146668889999999987654
No 311
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=42.50 E-value=25 Score=32.03 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=30.1
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 341 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 341 LQTSVPNVYAVGDLIGG--PMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp SBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 34667899999998864 24678899999999999974
No 312
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=41.02 E-value=27 Score=31.19 Aligned_cols=37 Identities=16% Similarity=0.277 Sum_probs=29.7
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
.++..++||.+||-+.. +.....|...|+.+|+.|..
T Consensus 293 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAGE--PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 34567899999998864 24678899999999999974
No 313
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=40.35 E-value=30 Score=31.39 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=32.6
Q ss_pred CCC-CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 243 QRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 243 ~~~-p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
.++ ..++||.+||-.....|..-..|...|..+|+.|.+.
T Consensus 359 lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 359 LQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp SBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 344 4789999999877666667888999999999998764
No 314
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=38.44 E-value=15 Score=34.53 Aligned_cols=39 Identities=28% Similarity=0.479 Sum_probs=29.7
Q ss_pred CCCCCeEEeeccccCC-C----C--CchhHHHHHHHHHHHHHHHHh
Q 022185 245 SPVEGFYLAGDYTKQK-Y----L--ASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~-~----~--~~v~gA~~SG~~aA~~i~~~~ 283 (301)
++++|||.||+-.+.+ + . .++-.|+..|++|++.+.+..
T Consensus 387 t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 432 (621)
T 2h88_A 387 KVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETC 432 (621)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhh
Confidence 6799999999965322 1 1 257778999999999987765
No 315
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=38.25 E-value=29 Score=32.70 Aligned_cols=35 Identities=17% Similarity=0.307 Sum_probs=25.4
Q ss_pred CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 246 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 246 p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
.++||||||+-.... |-+-|+.+|..|+.......
T Consensus 388 ~~~gLf~AGqinGt~---GyeEAaaqGl~AG~nAa~~~ 422 (637)
T 2zxi_A 388 KIRGLFHAGNFNGTT---GYEEAAGQGIVAGINAALRA 422 (637)
T ss_dssp SSBTEEECGGGGTBC---SHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeeecCCcc---hHHHHHHHHHHHHHHHHHHh
Confidence 378999999988763 44556668888887765543
No 316
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=37.76 E-value=15 Score=31.72 Aligned_cols=39 Identities=21% Similarity=0.254 Sum_probs=29.3
Q ss_pred CCCeEEeeccccC--CC---CCchhHHHHHHHHHHHHHHHHhhh
Q 022185 247 VEGFYLAGDYTKQ--KY---LASMEGAVLSGKLCAQAIVQDYVL 285 (301)
Q Consensus 247 ~~~l~~aGd~~~~--~~---~~~v~gA~~SG~~aA~~i~~~~~~ 285 (301)
+|+||.+|-.... +. ...+-|-+.||+.+|+.|++.+..
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~ 336 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDL 336 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHh
Confidence 5799999975422 11 135778889999999999998865
No 317
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=37.01 E-value=33 Score=31.81 Aligned_cols=38 Identities=24% Similarity=0.230 Sum_probs=31.0
Q ss_pred CCCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHHHhh
Q 022185 247 VEGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 247 ~~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
.+|++++||..+.-.| .|++.|+.+|..+|+.|...+.
T Consensus 346 ~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~ 386 (584)
T 2gmh_A 346 FPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLT 386 (584)
T ss_dssp ETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 3799999998765332 4899999999999999987653
No 318
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=37.00 E-value=37 Score=31.26 Aligned_cols=39 Identities=15% Similarity=0.303 Sum_probs=31.2
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 282 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~ 282 (301)
.+|..++||.+||-+.. ++...+.|...|+.+++.++..
T Consensus 346 ~~Ts~p~IyAiGDv~~~-~p~La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 346 SCTNIPSIFAVGDVAEN-VPELAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp SBCSSTTEEECTTSBTT-CCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccCCCeEEeccccCC-chhHHHHHHHHHHHHHHHHhcC
Confidence 45778999999998853 3346788999999999998753
No 319
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=36.23 E-value=20 Score=29.66 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=29.0
Q ss_pred CCCeEEeeccccC--CC---CCchhHHHHHHHHHHHHHHHHhh
Q 022185 247 VEGFYLAGDYTKQ--KY---LASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 247 ~~~l~~aGd~~~~--~~---~~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
.+++|.+|+.+.. +. .....+++.||..+|..|.+.+.
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALG 275 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhh
Confidence 3789999987532 11 13578999999999999999774
No 320
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=36.01 E-value=35 Score=32.33 Aligned_cols=42 Identities=19% Similarity=0.322 Sum_probs=28.0
Q ss_pred CCCCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 022185 243 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
..|.+++||.|||-.+.+..+....++..|+.++..+.+...
T Consensus 448 ~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~ 489 (662)
T 3gyx_A 448 RMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYL 489 (662)
T ss_dssp TBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHh
Confidence 457899999999987643223244566667777777665543
No 321
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=34.81 E-value=27 Score=31.00 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=25.4
Q ss_pred EEecceeeEEEecCCCcEEEEEEeCCcE-EecCEEEEccChh
Q 022185 60 VRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPVD 100 (301)
Q Consensus 60 I~l~~~V~~I~~~~~g~v~~V~~~~g~~-~~ad~VI~a~p~~ 100 (301)
|.++..|++|..+ ++ +|++.||++ +.+|.||+++...
T Consensus 254 i~~~~~v~~~~~~-~~---~v~~~dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 254 LQQVPEITKFDPT-TR---EIYLKGGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp EEEECCEEEEETT-TT---EEEETTTEEECCCSEEEECCCBC
T ss_pred eEEecCeEEEecC-CC---EEEECCCCEeccCCEEEECCCCC
Confidence 3445677777642 23 367778876 6899999998753
No 322
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=33.64 E-value=33 Score=30.65 Aligned_cols=22 Identities=18% Similarity=0.143 Sum_probs=18.3
Q ss_pred EEEeCCcEEecCEEEEccChhh
Q 022185 80 FLLTNGNVIDGDAYVFATPVDI 101 (301)
Q Consensus 80 V~~~~g~~~~ad~VI~a~p~~~ 101 (301)
|++.||+++++|.||+++....
T Consensus 255 V~~~dG~~i~~D~Vi~atG~~p 276 (464)
T 2xve_A 255 AYFADGSSEKVDAIILCTGYIH 276 (464)
T ss_dssp EEETTSCEEECSEEEECCCBCC
T ss_pred EEECCCCEEeCCEEEECCCCCC
Confidence 6677898899999999998643
No 323
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=33.09 E-value=35 Score=30.54 Aligned_cols=40 Identities=5% Similarity=0.011 Sum_probs=30.5
Q ss_pred CCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 022185 245 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 285 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~ 285 (301)
+..++||.+||-... ..+.+..|+..|..+|..|+..+..
T Consensus 349 t~~pgvya~GD~~~g-p~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 349 NGSPNEYVVGWIKRG-PTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TTCSSEEECTHHHHC-SCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCCC-CchhHHHHHHHHHHHHHHHHHHHHh
Confidence 456899999997653 2234667899999999999988754
No 324
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=33.04 E-value=24 Score=32.89 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=28.2
Q ss_pred CCCCeEEeeccccCC-C----CC--chhHHHHHHHHHHHHHHHHh
Q 022185 246 PVEGFYLAGDYTKQK-Y----LA--SMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 246 p~~~l~~aGd~~~~~-~----~~--~v~gA~~SG~~aA~~i~~~~ 283 (301)
+++|||.||+-.+.+ + .+ ++-.|+..|++|++.+.+..
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~ 423 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI 423 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 799999999965322 1 12 46678899999999887654
No 325
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=32.91 E-value=11 Score=32.75 Aligned_cols=47 Identities=21% Similarity=0.173 Sum_probs=36.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCcEEEEEEeCCcEEecCEEEEccChhhH
Q 022185 43 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 102 (301)
Q Consensus 43 ~~l~~~l~~~l~~~g~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 102 (301)
..+.+.|.+.+++.|++|+++++|++|+.. . +++||.||.|....-.
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~-----------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEHGEL--P-----------LADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSGGGC--C-----------GGGCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccchhc--c-----------cccCCEEEECCCCCch
Confidence 357788888888889999999999988641 0 2478999999877544
No 326
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=32.50 E-value=40 Score=30.44 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=29.2
Q ss_pred CCCCCCeEEeeccccC--------------------------------CCCCchhHHHHHHHHHHHHHHH
Q 022185 244 RSPVEGFYLAGDYTKQ--------------------------------KYLASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 244 ~~p~~~l~~aGd~~~~--------------------------------~~~~~v~gA~~SG~~aA~~i~~ 281 (301)
++..++||.+||-+.. +.+...+-|...|+.+|+.|..
T Consensus 301 ~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 301 RTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp BCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 4557899999998720 2334678899999999999975
No 327
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=32.27 E-value=29 Score=32.96 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=29.6
Q ss_pred CCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 246 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 246 p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
..+++|.+||-..+ ..+..|+..|..+|..|...+
T Consensus 640 ~~~~VyaiGD~~~~---~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 640 EIASVRGIGDAWAP---GTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp SCSEEEECGGGTSC---BCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCEEEEeCCCch---hhHHHHHHHHHHHHHHHHhhc
Confidence 46899999999876 456779999999999998774
No 328
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=32.16 E-value=36 Score=30.49 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=30.2
Q ss_pred CCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 022185 247 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 285 (301)
Q Consensus 247 ~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~~~ 285 (301)
.++||.+||-... ..+.+..|+..|..+|..|+..+..
T Consensus 359 ~p~vya~Gd~~~g-~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKRG-PTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcC-CCccHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999997743 2234678999999999999988754
No 329
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=30.94 E-value=51 Score=28.53 Aligned_cols=37 Identities=27% Similarity=0.197 Sum_probs=30.2
Q ss_pred CCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHHHhh
Q 022185 248 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDYV 284 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~~~~ 284 (301)
+|+.++||..+.-.| .|+.-|+.+|..+|+.|.+.+.
T Consensus 288 ~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~ 327 (421)
T 3nix_A 288 DGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLK 327 (421)
T ss_dssp TTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhc
Confidence 689999998764322 5899999999999999988653
No 330
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=29.34 E-value=27 Score=31.65 Aligned_cols=41 Identities=12% Similarity=0.187 Sum_probs=26.1
Q ss_pred EEEecceeeEEEecCC-CcEE-----------EEEEeCCcEEecCEEEEccCh
Q 022185 59 EVRLNSRVQKIELNDD-GTVK-----------NFLLTNGNVIDGDAYVFATPV 99 (301)
Q Consensus 59 ~I~l~~~V~~I~~~~~-g~v~-----------~V~~~~g~~~~ad~VI~a~p~ 99 (301)
++..+..|..+....+ +++. ++.+.+|+++++|.||+||..
T Consensus 355 ~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy 407 (501)
T 4b63_A 355 RILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGY 407 (501)
T ss_dssp EEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCE
T ss_pred eecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCC
Confidence 5777777877776432 2221 234457888999999999986
No 331
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=29.12 E-value=20 Score=32.33 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=26.8
Q ss_pred CCCCCCCeEEeeccccCCC-----C--CchhHHHHHHHHHHHHHHH
Q 022185 243 QRSPVEGFYLAGDYTKQKY-----L--ASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 243 ~~~p~~~l~~aGd~~~~~~-----~--~~v~gA~~SG~~aA~~i~~ 281 (301)
.+++++|||.|||-++.++ . .++..++..|+.|++.+..
T Consensus 325 ~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 325 GESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp CBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred CccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 4678999999999876332 1 1355566678888777654
No 332
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=26.46 E-value=55 Score=28.18 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=29.9
Q ss_pred CCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHHHh
Q 022185 248 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~~~ 283 (301)
+|+.++||..+.-.| .|++-|+++|..+|+.|.+..
T Consensus 286 ~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~ 324 (399)
T 2x3n_A 286 DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLAL 324 (399)
T ss_dssp TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhh
Confidence 789999998765433 489999999999999998754
No 333
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=25.57 E-value=32 Score=32.88 Aligned_cols=36 Identities=25% Similarity=0.448 Sum_probs=29.5
Q ss_pred CCCCCeEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 022185 245 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 245 ~p~~~l~~aGd~~~~~~~~~v~gA~~SG~~aA~~i~~~~ 283 (301)
+..++||.+||-..+ ..+..|+..|..+|..|...+
T Consensus 664 t~~~~VyAiGD~~~~---~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 664 NDIKGIYLIGDAEAP---RLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp GTCCEEEECGGGTSC---CCHHHHHHHHHHHHHTTTSSC
T ss_pred cCCCCeEEEeCccch---hhHHHHHHHHHHHHHHhhhhc
Confidence 456899999998764 467789999999999997653
No 334
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=25.57 E-value=64 Score=27.65 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=28.6
Q ss_pred CCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHH
Q 022185 248 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~ 281 (301)
+|+.++||..+.-.| .|++.|+++|...|+.|..
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 689999999876544 4899999999999998865
No 335
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=24.18 E-value=53 Score=28.10 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=28.3
Q ss_pred CCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHHHh
Q 022185 248 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~~~ 283 (301)
+|++++||..+.-.| .|++.|++.+...|+.|....
T Consensus 311 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~ 349 (412)
T 4hb9_A 311 STVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVA 349 (412)
T ss_dssp CSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 689999998755333 489999999999998887643
No 336
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=23.49 E-value=58 Score=28.27 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=28.0
Q ss_pred CCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHH
Q 022185 248 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~ 281 (301)
+|+.++||..+.-.| .|++.|++++...|+.|..
T Consensus 303 grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 339 (410)
T 3c96_A 303 GRITLLGDAAHLMYPMGANGASQAILDGIELAAALAR 339 (410)
T ss_dssp TTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhc
Confidence 689999998765433 4899999999999998865
No 337
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=21.73 E-value=80 Score=27.04 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=29.7
Q ss_pred CCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHHHh
Q 022185 248 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDY 283 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~~~ 283 (301)
+|+.++||..+.-.| .|++-|++++...|+.|....
T Consensus 279 grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~ 317 (394)
T 1k0i_A 279 GRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAY 317 (394)
T ss_dssp TTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHh
Confidence 689999998776543 489999999999999987654
No 338
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=21.64 E-value=82 Score=27.10 Aligned_cols=34 Identities=18% Similarity=0.081 Sum_probs=27.4
Q ss_pred CCeEEeeccccCCCC---CchhHHHHHHHHHHHHHHH
Q 022185 248 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQ 281 (301)
Q Consensus 248 ~~l~~aGd~~~~~~~---~~v~gA~~SG~~aA~~i~~ 281 (301)
+|+.++||..+.-.| .|++.|++.+...|+.|..
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~ 335 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK 335 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc
Confidence 689999998876543 4889999999888887754
No 339
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=20.90 E-value=88 Score=26.54 Aligned_cols=78 Identities=9% Similarity=0.024 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHhCCCCccccccCceEEEEEEeecCCcceecCCCCCCCCCCCCCCCCCeEEeeccccCCCCCchhHH
Q 022185 189 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGA 268 (301)
Q Consensus 189 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~l~~aGd~~~~~~~~~v~gA 268 (301)
+++..+.+++.+.+++|.+. . .+...+ .+.+...++..+.. ......+|+|++.-+.+. |+..|
T Consensus 287 ~~~~~~~l~~~~~~~~P~l~-----~-~~~~~w-----~g~r~~t~D~~p~i-g~~~~~~~l~~a~G~~g~----G~~~a 350 (389)
T 2gf3_A 287 YPEDESNLRAFLEEYMPGAN-----G-ELKRGA-----VCMYTKTLDEHFII-DLHPEHSNVVIAAGFSGH----GFKFS 350 (389)
T ss_dssp SHHHHHHHHHHHHHHCGGGC-----S-CEEEEE-----EEEEEECTTSCCEE-EEETTEEEEEEEECCTTC----CGGGH
T ss_pred CHHHHHHHHHHHHHhCCCCC-----C-CceEEE-----EEEeccCCCCCeEE-ccCCCCCCEEEEECCccc----ccccc
Confidence 44556889999999999864 1 222111 12222334322111 001124689988744433 67777
Q ss_pred HHHHHHHHHHHHHH
Q 022185 269 VLSGKLCAQAIVQD 282 (301)
Q Consensus 269 ~~SG~~aA~~i~~~ 282 (301)
...|+.+|+.|...
T Consensus 351 p~~g~~la~~i~~~ 364 (389)
T 2gf3_A 351 SGVGEVLSQLALTG 364 (389)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCC
Confidence 88999999999875
Done!