Query 022186
Match_columns 301
No_of_seqs 51 out of 53
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 15:20:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022186.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022186hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1urua_ a.238.1.1 (A:) Amphiph 54.2 25 0.0018 26.3 7.8 56 107-162 159-214 (217)
2 d2d4ca1 a.238.1.1 (A:11-247) E 49.0 21 0.0015 27.4 6.6 47 107-158 190-236 (237)
3 d1qvra2 c.37.1.20 (A:149-535) 22.3 47 0.0034 29.1 5.0 51 64-114 253-303 (387)
4 d1ewqa1 a.113.1.1 (A:267-541) 21.2 72 0.0052 24.6 5.5 46 118-166 18-63 (275)
5 d2asxa1 a.274.1.1 (A:278-331) 21.1 91 0.0066 19.3 6.4 51 60-117 4-54 (54)
6 d1ez3a_ a.47.2.1 (A:) Syntaxin 17.7 1.2E+02 0.0087 21.6 5.7 96 63-162 9-115 (124)
7 d1h2vc1 a.118.1.14 (C:29-290) 16.4 2.3E+02 0.017 22.9 7.9 35 99-133 158-192 (262)
8 d2b5id2 g.18.1.1 (D:103-165) I 16.1 28 0.0021 24.4 1.6 12 239-250 2-13 (63)
9 d1nlwa_ a.38.1.1 (A:) Mad prot 14.6 1.3E+02 0.0092 20.1 4.8 21 107-127 58-78 (79)
10 d1hlva1 a.4.1.7 (A:1-66) DNA-b 11.7 1.1E+02 0.0077 21.0 3.7 30 98-127 10-57 (66)
No 1
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=54.15 E-value=25 Score=26.29 Aligned_cols=56 Identities=9% Similarity=0.031 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhchHHHHHHHhccccCCCcchhhhhhhHHHHHHHHHHhHHHHHHHh
Q 022186 107 RITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTAS 162 (301)
Q Consensus 107 ~mnsHLeaVLkeK~~LrqRLqkP~~~enLPVEA~yHr~vVeLL~lavsfIe~Lee~ 162 (301)
.++..|..=|..=...+.....+.....+-..+.||..+.+++..+...|.+|.+.
T Consensus 159 ~~~~~l~~el~~~~~~~~~~~~~~l~~~~~~q~~~~~~~~~~~~~l~~~~~~l~~~ 214 (217)
T d1urua_ 159 ILNTELHDELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKLATE 214 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 45555555555555556667777777888999999999999999999999988765
No 2
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.96 E-value=21 Score=27.39 Aligned_cols=47 Identities=13% Similarity=0.211 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhchHHHHHHHhccccCCCcchhhhhhhHHHHHHHHHHhHHHH
Q 022186 107 RITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGA 158 (301)
Q Consensus 107 ~mnsHLeaVLkeK~~LrqRLqkP~~~enLPVEA~yHr~vVeLL~lavsfIe~ 158 (301)
.+...|..++.++..+...| ...+-.+..||+..+++|..+...|++
T Consensus 190 ~~~~~l~~l~~~~~~~~~~l-----~~~~~aq~~y~~~~~~~l~~l~~~l~~ 236 (237)
T d2d4ca1 190 IAESSMFNLLEMDIEQVSQL-----SALVQAQLEYHKQAVQILQQVTVRLEE 236 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34445555555555555444 347778889999999999888877653
No 3
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=22.29 E-value=47 Score=29.12 Aligned_cols=51 Identities=22% Similarity=0.363 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhcccceeeeccccccccccChhHHHHHHHHHHHHHHHHHH
Q 022186 64 RELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKD 114 (301)
Q Consensus 64 rQIT~lQ~eLdq~nLEIelLklDKeTADltH~~~L~kK~e~LQ~mnsHLea 114 (301)
++|..+.++|.+++.|.+.++.+++.........+.+....|+.-..-|++
T Consensus 253 ~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~ 303 (387)
T d1qvra2 253 EEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRA 303 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhhHHHHHHHHHHH
Confidence 568888999999999999999999887777777776666666644444443
No 4
>d1ewqa1 a.113.1.1 (A:267-541) DNA repair protein MutS, domain III {Thermus aquaticus [TaxId: 271]}
Probab=21.22 E-value=72 Score=24.61 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=29.3
Q ss_pred chHHHHHHHhccccCCCcchhhhhhhHHHHHHHHHHhHHHHHHHhHhhh
Q 022186 118 NKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADF 166 (301)
Q Consensus 118 eK~~LrqRLqkP~~~enLPVEA~yHr~vVeLL~lavsfIe~Lee~Le~I 166 (301)
+|+-|+++|.+|++.-. .|+..| .+|+.|-.-..+...|...|..|
T Consensus 18 GkRlLr~wl~~Pl~d~~-~I~~R~--d~Ve~l~~~~~~~~~l~~~L~~i 63 (275)
T d1ewqa1 18 GRRLLQSWLRHPLLDRG-PLEARL--DRVEGFVREGALREGVRRLLYRL 63 (275)
T ss_dssp HHHHHHHHHHSCCCCHH-HHHHHH--HHHHHHHHCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCccCCHH-HHHHHH--HHHHHHHhChhhHHHHHHHHhcc
Confidence 47899999999987533 344333 45665554455666676666553
No 5
>d2asxa1 a.274.1.1 (A:278-331) Hypothetical protein AF1503 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.13 E-value=91 Score=19.30 Aligned_cols=51 Identities=25% Similarity=0.356 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHhhcccceeeeccccccccccChhHHHHHHHHHHHHHHHHHHHhh
Q 022186 60 IRVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQ 117 (301)
Q Consensus 60 ~s~LrQIT~lQ~eLdq~nLEIelLklDKeTADltH~~~L~kK~e~LQ~mnsHLeaVLk 117 (301)
.+-|++++..-+.|.+=++.. ...++...+++++-.+++..|...|+..++
T Consensus 4 t~Pl~~l~~~~~~ia~Gdl~~-------~i~~~~~~dEig~L~~~fn~M~~~l~~~~e 54 (54)
T d2asxa1 4 TRPIIELSNTADKIAEGNLEA-------EVPHQNRADEIGILAKSIERLRRSLKVAME 54 (54)
T ss_dssp HHHHHHHHHHHHHHHTTCTTC-------CCTTTTCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCCCC-------ccCCCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 456888888889999887764 344556788999999999999999987763
No 6
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=17.74 E-value=1.2e+02 Score=21.60 Aligned_cols=96 Identities=11% Similarity=0.229 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhhcccceeeeccccccccccChhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHh--------ccccCCC
Q 022186 63 LRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQ--------QPYSLDC 134 (301)
Q Consensus 63 LrQIT~lQ~eLdq~nLEIelLklDKeTADltH~~~L~kK~e~LQ~mnsHLeaVLkeK~~LrqRLq--------kP~~~en 134 (301)
+.++..++.+|.+++..+..++.-. ..=|+.+.-...-. ..|++++..+.+.=..|+.||. .+-++..
T Consensus 9 f~eV~~Ir~~I~~i~~~v~~i~~~~-~~~l~~~~~~~~~~---~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~ 84 (124)
T d1ez3a_ 9 FEQVEEIRGFIDKIAENVEEVKRKH-SAILASPNPDEKTK---EELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRS 84 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCSSCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCcchhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence 5667777777777777666665332 12233322222222 2355555555555555665554 3444433
Q ss_pred cc---hhhhhhhHHHHHHHHHHhHHHHHHHh
Q 022186 135 IP---VEAEYQKQFSELLMKAASDYGALTAS 162 (301)
Q Consensus 135 LP---VEA~yHr~vVeLL~lavsfIe~Lee~ 162 (301)
=+ +--..|..+..-|..++.-|..++..
T Consensus 85 s~~~Rir~~q~~~L~~kf~e~m~~yq~~q~~ 115 (124)
T d1ez3a_ 85 SADLRIRKTQHSTLSRKFVEVMSEYNATQSD 115 (124)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22334555555555555555555543
No 7
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.37 E-value=2.3e+02 Score=22.86 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHhccccCC
Q 022186 99 QKKIETLSRITTILKDVIQNKDRIIARLQQPYSLD 133 (301)
Q Consensus 99 ~kK~e~LQ~mnsHLeaVLkeK~~LrqRLqkP~~~e 133 (301)
+++-+.++.+-+.++..++++...-..|.+|+..+
T Consensus 158 ~~~~~~~~~ll~~i~~y~~~r~~~~~~ll~~~~~~ 192 (262)
T d1h2vc1 158 EKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAD 192 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCTTHHHHCSBCCC
T ss_pred hcCHHHHHHHHHHHHHHHHhccccchhhhhccccC
Confidence 36667888888999999999988889999999654
No 8
>d2b5id2 g.18.1.1 (D:103-165) Interleukin-2 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.13 E-value=28 Score=24.45 Aligned_cols=12 Identities=58% Similarity=1.561 Sum_probs=10.4
Q ss_pred ccCCCCCCCCCC
Q 022186 239 CVTPPPWTNESS 250 (301)
Q Consensus 239 ~~~~~~~~~~~~ 250 (301)
|-.||||..|+.
T Consensus 2 C~ePp~w~He~~ 13 (63)
T d2b5id2 2 CREPPPWENEAT 13 (63)
T ss_dssp BCCCCCCSSCCS
T ss_pred CCCCCCCCCccc
Confidence 789999999865
No 9
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.58 E-value=1.3e+02 Score=20.14 Aligned_cols=21 Identities=5% Similarity=0.245 Sum_probs=10.4
Q ss_pred HHHHHHHHHhhchHHHHHHHh
Q 022186 107 RITTILKDVIQNKDRIIARLQ 127 (301)
Q Consensus 107 ~mnsHLeaVLkeK~~LrqRLq 127 (301)
.+....+.+-++.+.|++||.
T Consensus 58 ~l~~~~~~L~~~~~~L~~~l~ 78 (79)
T d1nlwa_ 58 KAVHQIDQLQREQRHLKRQLE 78 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 333334444455556666654
No 10
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.75 E-value=1.1e+02 Score=20.99 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHH------------------HHHHhhchHHHHHHHh
Q 022186 98 MQKKIETLSRITTI------------------LKDVIQNKDRIIARLQ 127 (301)
Q Consensus 98 L~kK~e~LQ~mnsH------------------LeaVLkeK~~LrqRLq 127 (301)
+++|++.++.+..+ +..|+++|+.|..-.+
T Consensus 10 ~~eK~~ii~~~e~g~k~sq~eIA~~fGv~~STvs~IlKnK~kil~~~~ 57 (66)
T d1hlva1 10 FREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASER 57 (66)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHTCCHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcchHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Confidence 56777777765543 6678888888876544
Done!