Query 022189
Match_columns 301
No_of_seqs 180 out of 699
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 15:23:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022189.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022189hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cw9_A Translocase of inner mi 100.0 5.1E-31 1.7E-35 233.8 19.1 150 141-299 32-186 (194)
2 3qk9_A Mitochondrial import in 99.9 8.8E-27 3E-31 210.8 15.9 148 142-298 56-213 (222)
3 3fka_A Uncharacterized NTF-2 l 90.1 1.3 4.6E-05 34.8 8.3 91 168-299 11-116 (120)
4 3duk_A NTF2-like protein of un 86.0 7.1 0.00024 30.7 10.1 92 168-299 14-120 (125)
5 3blz_A NTF2-like protein of un 85.8 6.5 0.00022 30.6 9.8 30 167-196 13-42 (128)
6 3gwr_A Putative calcium/calmod 79.4 14 0.00048 29.7 9.6 28 167-194 9-36 (144)
7 2ux0_A Calcium-calmodulin depe 78.5 21 0.00072 27.6 12.3 29 166-194 13-41 (143)
8 4hyz_A Uncharacterized protein 71.3 34 0.0012 26.6 11.9 40 157-200 9-48 (114)
9 3hx8_A MLR2180 protein, putati 69.8 31 0.0011 25.5 11.9 31 165-195 5-35 (129)
10 3gzr_A Uncharacterized protein 67.1 46 0.0016 26.5 10.8 29 167-195 7-35 (146)
11 2rcd_A Uncharacterized protein 63.1 48 0.0016 25.3 11.0 30 165-194 13-42 (129)
12 3f7s_A Uncharacterized NTF2-li 61.6 52 0.0018 25.2 12.7 28 167-194 9-36 (142)
13 4i4k_A Uncharacterized protein 59.0 63 0.0022 25.3 10.6 29 167-195 20-48 (143)
14 3h51_A Putative calcium/calmod 58.6 65 0.0022 25.3 11.0 30 166-195 20-49 (156)
15 3cnx_A Uncharacterized protein 56.9 85 0.0029 26.1 14.1 30 167-196 13-42 (170)
16 3dmc_A NTF2-like protein; stru 56.5 4.8 0.00016 31.9 1.9 33 163-195 9-41 (134)
17 3fsd_A NTF2-like protein of un 53.7 73 0.0025 24.4 10.7 29 167-195 15-43 (134)
18 3bb9_A Putative orphan protein 52.6 80 0.0027 24.5 10.8 30 166-195 30-59 (148)
19 3h3h_A Uncharacterized snoal-l 43.6 16 0.00054 27.7 3.0 29 166-194 8-36 (122)
20 3fgy_A Uncharacterized NTF2-li 41.7 16 0.00054 27.8 2.8 29 167-195 6-34 (135)
21 2v2f_A Penicillin binding prot 39.1 8.6 0.00029 22.2 0.6 15 253-267 4-18 (26)
22 3f40_A Uncharacterized NTF2-li 38.5 19 0.00064 27.6 2.7 28 168-195 8-35 (114)
23 1ohp_A Steroid delta-isomerase 38.4 18 0.00062 26.4 2.5 29 167-195 6-34 (125)
24 3i0y_A Putative polyketide cyc 36.8 20 0.00068 27.4 2.6 29 167-195 9-37 (140)
25 1oh0_A Steroid delta-isomerase 36.1 24 0.00084 26.4 3.0 30 166-195 7-36 (131)
26 3ehc_A Snoal-like polyketide c 36.1 28 0.00096 26.4 3.4 28 168-195 5-32 (128)
27 1tuh_A BAL32A, hypothetical pr 35.9 22 0.00076 28.1 2.8 28 167-194 30-57 (156)
28 3ksp_A Calcium/calmodulin-depe 35.6 1.6E+02 0.0056 23.2 9.1 99 171-297 14-120 (129)
29 3ebt_A Uncharacterized NTF2-li 35.4 22 0.00076 26.8 2.6 29 167-195 4-32 (132)
30 2r4i_A Uncharacterized protein 35.0 22 0.00074 26.4 2.5 30 166-195 6-35 (123)
31 3en8_A Uncharacterized NTF-2 l 34.4 20 0.0007 27.8 2.3 29 167-195 6-34 (128)
32 2r25_A Phosphorelay intermedia 33.9 47 0.0016 28.1 4.6 36 157-192 25-64 (167)
33 3fh1_A Uncharacterized NTF2-li 33.3 20 0.00069 27.4 2.1 30 166-195 17-46 (129)
34 2f86_B Hypothetical protein K1 32.6 27 0.00092 28.1 2.8 30 167-196 13-42 (143)
35 1nww_A Limonene-1,2-epoxide hy 32.5 15 0.00053 28.5 1.3 27 169-195 25-51 (149)
36 3ec9_A Uncharacterized NTF2-li 30.9 27 0.00092 26.8 2.5 29 168-196 14-42 (140)
37 2gex_A SNOL; alpha+beta barrel 30.7 30 0.001 27.1 2.8 30 166-195 4-33 (152)
38 2bng_A MB2760; epoxide hydrola 30.5 31 0.0011 26.9 2.8 29 167-195 16-44 (149)
39 3d9r_A Ketosteroid isomerase-l 30.4 37 0.0013 25.4 3.2 29 167-195 12-40 (135)
40 3ff2_A Uncharacterized cystati 30.3 28 0.00097 25.9 2.5 27 169-195 5-31 (117)
41 2k54_A Protein ATU0742; protei 30.1 32 0.0011 25.8 2.8 29 167-195 4-32 (123)
42 3dm8_A Uncharacterized protein 29.6 23 0.00079 27.7 1.9 28 168-195 6-33 (143)
43 3f7x_A Putative polyketide cyc 28.1 31 0.001 27.5 2.4 29 168-196 22-50 (151)
44 1s5a_A Hypothetical protein YE 27.5 35 0.0012 26.2 2.6 29 167-195 11-39 (150)
45 3g16_A Uncharacterized protein 25.1 25 0.00084 29.2 1.3 30 167-196 11-40 (156)
46 1z1s_A Hypothetical protein PA 24.8 42 0.0014 26.8 2.7 29 168-196 25-53 (163)
47 3mso_A Steroid delta-isomerase 23.8 14 0.00047 29.6 -0.5 30 166-195 9-38 (143)
48 3g8z_A Protein of unknown func 23.7 40 0.0014 26.5 2.3 28 168-195 22-49 (148)
49 3hho_A CO-chaperone protein HS 23.6 2.8E+02 0.0095 22.9 7.7 45 163-207 124-169 (174)
50 2gey_A ACLR protein; alpha+bet 23.5 40 0.0014 26.7 2.3 28 167-194 5-32 (158)
51 3f14_A Uncharacterized NTF2-li 23.3 24 0.00081 26.5 0.8 25 171-195 5-29 (112)
52 2a0b_A HPT domain; sensory tra 23.1 99 0.0034 23.7 4.5 29 162-190 34-62 (125)
53 2a15_A Hypothetical protein RV 21.6 59 0.002 24.7 2.9 29 167-195 8-36 (139)
54 2owp_A Hypothetical protein BX 20.5 83 0.0028 24.6 3.6 33 163-195 8-40 (129)
55 4h3u_A Hypothetical protein; s 20.3 27 0.00092 27.7 0.6 26 170-195 29-54 (158)
56 3g0k_A Putative membrane prote 20.3 2E+02 0.007 22.6 6.0 30 166-195 27-57 (148)
No 1
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=99.97 E-value=5.1e-31 Score=233.85 Aligned_cols=150 Identities=18% Similarity=0.280 Sum_probs=130.2
Q ss_pred HHHHHhHHHHHHHHHh--CCCChHHHHHHHHHH-HHHHHHHHHcCCHHHHHHhhcHHHHHHHHHHHHHhhccCCceeeee
Q 022189 141 IILELKSAYAIAKLRK--SGYSKQKFYTEAVDL-YKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWEL 217 (301)
Q Consensus 141 l~~~~ks~~~i~~irk--~~Fd~~~F~~~Ak~i-y~~I~~A~a~gD~~~Lr~lvTe~~y~~l~~~Ik~R~~~g~~v~W~l 217 (301)
+..+.+.+.++++|++ |+||++.|+++|+++ |.+|++||++||++.|++||||+||+.|.+++++|+.+|.++++++
T Consensus 32 ~f~~s~~~~~l~~i~~~dp~Fd~~~Fl~~ak~~iy~~Iq~A~~~gD~~~Lr~~~t~~~~~~~~~~i~~r~~~g~~~~~~~ 111 (194)
T 2cw9_A 32 LFSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKALGLQFHSRI 111 (194)
T ss_dssp TTHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHHTTCEECCEE
T ss_pred ccCCCHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHhcCHHHHHHHHHHHHHHHHCCCccccEE
Confidence 5578888999999997 999999999999998 8999999999999999999999999999999999999998766665
Q ss_pred ecccccceEEEEEEeeecccccCCCEEEEEEEEEeEEeeeEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCC--eEE
Q 022189 218 IEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAY--WRL 295 (301)
Q Consensus 218 v~~le~~rvv~~rli~I~~~d~~~~~~QVTVRf~s~Q~~~iyD~~GrlV~Gs~d~~~dV~EyWVFeR~l~~~~~~--WrL 295 (301)
+. +. ++.++++. ..+..+++||+|+++|++|++|++|++|+|+++++.+|.|+|+|+|+++..+++ |+|
T Consensus 112 v~-i~-----~~el~~a~---~~~~~~~itV~f~~~~i~~~rd~~G~vveG~~~~~~~v~e~W~f~R~~~~~~p~~~W~L 182 (194)
T 2cw9_A 112 LD-ID-----NVDLAMGK---MVEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRMLYVWALCRDQDELNPYAAWRL 182 (194)
T ss_dssp EE-EE-----EEEEEEEE---EETTEEEEEEEEEEEEECEEECTTSCEEEECTTCCEEEEEEEEEEECTTCSCGGGCEEE
T ss_pred EE-ec-----ccEEEEEE---EeCCeeEEEEEEEEEEEEEEECCCCCEecCCCCCceEEEEEEEEEEeCCCCCCCCCEEE
Confidence 42 22 33333332 224679999999999999999999999999999999999999999999876654 999
Q ss_pred EEEe
Q 022189 296 CGRI 299 (301)
Q Consensus 296 ~gki 299 (301)
+|.=
T Consensus 183 ~~iq 186 (194)
T 2cw9_A 183 LDIS 186 (194)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9863
No 2
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=99.94 E-value=8.8e-27 Score=210.77 Aligned_cols=148 Identities=17% Similarity=0.168 Sum_probs=121.2
Q ss_pred HHHHhHHHHHHHHHh--CCCChHHHHHHHHHH-HHHHHHHHHcCCHHHHHHhhcHHHHHHHHHHHHHhhccCCceeeeee
Q 022189 142 ILELKSAYAIAKLRK--SGYSKQKFYTEAVDL-YKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELI 218 (301)
Q Consensus 142 ~~~~ks~~~i~~irk--~~Fd~~~F~~~Ak~i-y~~I~~A~a~gD~~~Lr~lvTe~~y~~l~~~Ik~R~~~g~~v~W~lv 218 (301)
..+...+.+|++|++ |+|++.+|+++|++. |.+|++||++||.+.|++||++++|+.|.+.|++|.+.|.+++
T Consensus 56 f~~te~a~~l~~Ik~~DPsF~~~~Fl~~a~~ai~p~Il~Af~~GD~~~Lk~llse~~y~~f~~~i~~r~~~G~~~d---- 131 (222)
T 3qk9_A 56 FAETESSRVYSQFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYAD---- 131 (222)
T ss_dssp ----CCHHHHTTCC-----CCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHTTTEEEC----
T ss_pred cCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHHCCCEee----
Confidence 345566788999986 999999999999988 5689999999999999999999999999999999999887543
Q ss_pred cccccceEEEEEEeeecccccC--CCEEEEEEEEEeEEeeeEEc-CCCceecCCCCCeeeeeEEEEEEEeCCCCC----C
Q 022189 219 EPIIKMRTLRARLIGVDRNDLN--KVFVQLTLEFLAKQKFEAYD-SKGVTVAGDKTKEVLVRDIWVFEKSLFHPG----A 291 (301)
Q Consensus 219 ~~le~~rvv~~rli~I~~~d~~--~~~~QVTVRf~s~Q~~~iyD-~~GrlV~Gs~d~~~dV~EyWVFeR~l~~~~----~ 291 (301)
.++|+++-++|..+++. +..+++||+|.++|+.|++| +.|+||+|+++++..+.|+|+|+|+++..+ +
T Consensus 132 -----~~il~I~~vdI~~a~~~~~~~~p~itV~f~aq~i~~~rd~k~GeVVeGd~d~i~~~~~~WtF~R~~~~~d~~~tp 206 (222)
T 3qk9_A 132 -----GRILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTRDPEQIDDDETE 206 (222)
T ss_dssp -----CEEEEEEEEEEEEEEECSSSCCEEEEEEEEEEEECCEEESTTCCCSSSCTTCCEEEEEEEEEEECCC--------
T ss_pred -----eeEeeecceEEEEEEEecCCCceEEEEEEEEEEEEEEEeCCCCccccCCCCCceEEEEEEEEEEcCccCCCCCCC
Confidence 44555555555555444 58899999999999999999 789999999999999999999999998544 7
Q ss_pred CeEEEEE
Q 022189 292 YWRLCGR 298 (301)
Q Consensus 292 ~WrL~gk 298 (301)
+|+|.+.
T Consensus 207 ~WkL~ei 213 (222)
T 3qk9_A 207 GWKILEF 213 (222)
T ss_dssp CEEEEEE
T ss_pred CcEEehh
Confidence 8999985
No 3
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=90.14 E-value=1.3 Score=34.83 Aligned_cols=91 Identities=15% Similarity=0.176 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH--------------HHHHHHHHHHhhcc-CCceeeeeecccccceEEEEEEe
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKM--------------YSALKNEIKQRESM-WSSVNWELIEPIIKMRTLRARLI 232 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~--------------y~~l~~~Ik~R~~~-g~~v~W~lv~~le~~rvv~~rli 232 (301)
.+++...-.+++.+||.+.|+...+|.+ .+++.. +...+.. +.. -..+++. +
T Consensus 11 I~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~---------~~~~i~~---I 77 (120)
T 3fka_A 11 LTALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIA-MCEDAADAETD---------PFWAISS---V 77 (120)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCC---------CCEEEEE---E
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEecCCcEEEcCHHHHHh-hcCCccCCCCC---------ceEEEEE---E
Confidence 3444556677889999999999999887 456666 6633221 110 0111222 2
Q ss_pred eecccccCCCEEEEEEEEEeEEeeeEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCCeEEEEEe
Q 022189 233 GVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAYWRLCGRI 299 (301)
Q Consensus 233 ~I~~~d~~~~~~QVTVRf~s~Q~~~iyD~~GrlV~Gs~d~~~dV~EyWVFeR~l~~~~~~WrL~gki 299 (301)
+| .++.+.+.|.+. + . ...+.+|.+|.|. ++.|+|..|+
T Consensus 78 ~i-----~gd~A~a~v~~~-------~-------~-----~~~f~D~~~L~k~----dg~WkIv~K~ 116 (120)
T 3fka_A 78 SV-----QGDIAMLHVEND-------W-------A-----GMRFDDFLTVLLH----EGSWRIVSKV 116 (120)
T ss_dssp EE-----ETTEEEEEEEEE-------E-------T-----TEEEEEEEEEEEE----TTEEEEEEEE
T ss_pred EE-----ECCEEEEEEEEE-------c-------C-----CCceEEEEEEEEe----CCEEEEEEEE
Confidence 22 245666666631 1 1 2358999999998 7899999986
No 4
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=86.00 E-value=7.1 Score=30.73 Aligned_cols=92 Identities=11% Similarity=0.222 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH---------------HHHHHHHHHHhhccCCceeeeeecccccceEEEEEEe
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKM---------------YSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLI 232 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~---------------y~~l~~~Ik~R~~~g~~v~W~lv~~le~~rvv~~rli 232 (301)
.+++.....+++.+||.+.|+..++|++ ++++...+..+... ... +.++.
T Consensus 14 I~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~~G~~l~~~~~~e~~~~v~~~~p~-~~~--------------~~~I~ 78 (125)
T 3duk_A 14 ITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYVGDKLAFNGPIKDLYDWHNSNGPA-KNV--------------QSRIT 78 (125)
T ss_dssp HHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEETTEEEEEEETHHHHHHHHHHCCC-TTC--------------EEEEE
T ss_pred HHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEcCCCEEeeCCHHHHHHHHhccCCC-Ccc--------------cceEE
Confidence 4455667778889999999999998877 24555555544211 110 11222
Q ss_pred eecccccCCCEEEEEEEEEeEEeeeEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCCeEEEEEe
Q 022189 233 GVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAYWRLCGRI 299 (301)
Q Consensus 233 ~I~~~d~~~~~~QVTVRf~s~Q~~~iyD~~GrlV~Gs~d~~~dV~EyWVFeR~l~~~~~~WrL~gki 299 (301)
.|+ +.++.+.+.|++. . ..| ..++||.+|.|. ++.|+|..|+
T Consensus 79 ~I~---i~gd~A~a~v~~~--~-----------~~~-----~~f~D~l~L~k~----dg~WkIv~K~ 120 (125)
T 3duk_A 79 NID---IVGTVAHARVEAE--N-----------WTN-----FKFSDLFLLLKL----DGKWTIVNKV 120 (125)
T ss_dssp EEE---EETTEEEEEEEEE--C-----------SSS-----CCEEEEEEEEEE----TTEEEEEEEE
T ss_pred EEE---EECCEEEEEEEEE--E-----------cCC-----CeEEEEEEEEEe----CCEEEEEEEE
Confidence 221 2245666666542 0 011 357999999998 7899999986
No 5
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=85.85 E-value=6.5 Score=30.59 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 196 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~y 196 (301)
..+++......|+.++|.+.|+...+|.+.
T Consensus 13 aI~~~~~~y~~a~~~~D~~~l~~~f~~da~ 42 (128)
T 3blz_A 13 AIVEVLSKYNEGGKKADSTIMRPAFSSQAT 42 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCcE
Confidence 445677788899999999999999888753
No 6
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=79.39 E-value=14 Score=29.66 Aligned_cols=28 Identities=0% Similarity=-0.086 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEK 194 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~ 194 (301)
.++++....++||.+||.+.|..+.+++
T Consensus 9 ~~~~~~~af~~A~~~gD~da~~al~a~d 36 (144)
T 3gwr_A 9 TPEAAEDAFYAAFEARSLDDMMAVWARD 36 (144)
T ss_dssp SHHHHHHHHHHHHHHTCHHHHHHHBCSS
T ss_pred CHHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence 4567777889999999999999888765
No 7
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=78.53 E-value=21 Score=27.61 Aligned_cols=29 Identities=17% Similarity=0.283 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEK 194 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~ 194 (301)
++..++....++||.+||.+.+..++++.
T Consensus 13 ~~I~~l~~~~~~A~~~~D~~~~~~l~a~d 41 (143)
T 2ux0_A 13 QEIIKITEQLIEAINNGDFEAYTKICDPG 41 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence 45567788999999999999999988776
No 8
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=71.30 E-value=34 Score=26.62 Aligned_cols=40 Identities=20% Similarity=0.320 Sum_probs=31.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHcCCHHHHHHhhcHHHHHHHH
Q 022189 157 SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALK 200 (301)
Q Consensus 157 ~~Fd~~~F~~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~y~~l~ 200 (301)
..||.+.-.+.|++ +.+-+.+||.+.++.+++++|-+.+.
T Consensus 9 ~~fde~~v~~~A~~----~I~~l~~~dy~~i~~~~~~~lk~~Lt 48 (114)
T 4hyz_A 9 EGFDKETVRKQAME----DIEIAQSKDYESWKSRFTKDLQSSLT 48 (114)
T ss_dssp TTCCHHHHHHHHHH----HHHHHHTTCHHHHHTTBCHHHHTTCC
T ss_pred hhhhHHHHHHHHHH----HHHHHHhCCHHHHHHHhCHHHHhhCC
Confidence 67888888888874 55667789999999999988854433
No 9
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=69.83 E-value=31 Score=25.53 Aligned_cols=31 Identities=3% Similarity=-0.013 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 165 YTEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 165 ~~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.+..+++.....+||.+||.+.|..+.+|.+
T Consensus 5 ~~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da 35 (129)
T 3hx8_A 5 KEAIEAANADFVKAYNSKDAAGVASKYMDDA 35 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhCCCe
Confidence 4456778888899999999999999988754
No 10
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=67.11 E-value=46 Score=26.47 Aligned_cols=29 Identities=7% Similarity=-0.078 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
..++++.....||.++|.+.|..+.+|.+
T Consensus 7 aI~~l~~~~~~A~~~~D~d~~~~lf~~Da 35 (146)
T 3gzr_A 7 AIQALIQAYFTAWNTNAPERFAEIFWPDG 35 (146)
T ss_dssp HHHHHHHHHHHHHHTTCGGGSGGGEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhccCCe
Confidence 34678889999999999999999988776
No 11
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=63.07 E-value=48 Score=25.26 Aligned_cols=30 Identities=7% Similarity=0.140 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022189 165 YTEAVDLYKEINTLMANGDKTSLRKAVTEK 194 (301)
Q Consensus 165 ~~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~ 194 (301)
..++.++|....+|+.+||.+.|..+.++.
T Consensus 13 ~~ei~~~~~~y~~A~~~~D~~~l~~lf~~d 42 (129)
T 2rcd_A 13 LADVTAAFYRYEKALTGNDVAVLDELFWHD 42 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHBCCS
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhccCC
Confidence 556778888888999999999999998876
No 12
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=61.55 E-value=52 Score=25.20 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEK 194 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~ 194 (301)
+..+++....+||++||.+.+..++++.
T Consensus 9 ~I~~l~~~~~~A~~~~D~~~~~~l~a~D 36 (142)
T 3f7s_A 9 EIRQLIERWMQAVRDRDIPGIIAPYADD 36 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence 4466788899999999999999988875
No 13
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=59.04 E-value=63 Score=25.32 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+.++++....+||.+||.+.|..+.++.+
T Consensus 20 ~i~~l~~~y~~A~~~~D~d~~~~lf~~Da 48 (143)
T 4i4k_A 20 AVAALPARIVAAWADHDADRFADVFAEDG 48 (143)
T ss_dssp HHHTHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhhcCc
Confidence 44678888999999999999999988765
No 14
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=58.65 E-value=65 Score=25.33 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
++.++++....+||.+||.+.|..+.++++
T Consensus 20 ~~I~~~~~~~~~A~~~~D~~~l~~l~a~Da 49 (156)
T 3h51_A 20 REVAALFDTWNAALATGNPHKVADLYAPDG 49 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCE
Confidence 344667788889999999999999988764
No 15
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=56.93 E-value=85 Score=26.14 Aligned_cols=30 Identities=13% Similarity=-0.010 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 196 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~y 196 (301)
+..++....++||.+||.+.|..+-++...
T Consensus 13 ~I~~~~~~~~~A~~~gD~~~l~alwa~d~~ 42 (170)
T 3cnx_A 13 QVGLANTAFYEAMERGDFETLSSLWLTPAD 42 (170)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCcc
Confidence 345677888999999999999998887754
No 16
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=56.50 E-value=4.8 Score=31.88 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 163 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 163 ~F~~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.=++.+++++....+|+++||.+.|..+++|.+
T Consensus 9 ~~~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~ 41 (134)
T 3dmc_A 9 NTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDF 41 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCE
Confidence 345678899999999999999999999987643
No 17
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=53.67 E-value=73 Score=24.41 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+..+++....+|+.+||.+.|..++++++
T Consensus 15 ~I~~l~~~~~~A~~~~D~~~l~~L~~~d~ 43 (134)
T 3fsd_A 15 DIAFYEERLRAAMLTGDLKGLETLLADDL 43 (134)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHhhcCCCE
Confidence 45677888999999999999999998764
No 18
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=52.61 E-value=80 Score=24.53 Aligned_cols=30 Identities=13% Similarity=0.369 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+.+.++.....+|+.+||.+.|..+.+|++
T Consensus 30 ~~i~~~~~~~~~A~~~~D~~~l~~l~a~Da 59 (148)
T 3bb9_A 30 SAAGNVVKQFHAALQMGNEAIVRQSLAANV 59 (148)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHhhCCCe
Confidence 355677888899999999999999988874
No 19
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=43.60 E-value=16 Score=27.73 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEK 194 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~ 194 (301)
+.++++.....+||+++|.+.|..++++.
T Consensus 8 ~~~~~~~~~~~~a~n~~D~~~l~~l~a~D 36 (122)
T 3h3h_A 8 AFAQQFSREWIDAWNAHDLDAILSHYADG 36 (122)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHhcCCC
Confidence 45677888899999999999999887653
No 20
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=41.73 E-value=16 Score=27.84 Aligned_cols=29 Identities=31% Similarity=0.464 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
..+++.....+||.+||.+.+.++++|++
T Consensus 6 ~~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 34 (135)
T 3fgy_A 6 ENVQIVKDFFAAMGRGDKKGLLAVSAEDI 34 (135)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 45778888899999999999999987764
No 21
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=39.09 E-value=8.6 Score=22.16 Aligned_cols=15 Identities=27% Similarity=0.390 Sum_probs=12.2
Q ss_pred EEeeeEEcCCCceec
Q 022189 253 KQKFEAYDSKGVTVA 267 (301)
Q Consensus 253 ~Q~~~iyD~~GrlV~ 267 (301)
.+...+||++|++|.
T Consensus 4 ~~ss~IYD~~g~~i~ 18 (26)
T 2v2f_A 4 TTSSKIYDNKNQLIA 18 (26)
T ss_pred CCCCEEEeCCCCEee
Confidence 456689999999885
No 22
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=38.49 E-value=19 Score=27.57 Aligned_cols=28 Identities=18% Similarity=0.229 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.+++-....+||.+||.+.|..+++|.+
T Consensus 8 ~~~~v~~f~~A~~~gD~~~l~~lla~Dv 35 (114)
T 3f40_A 8 TRDLVLEFIHALNTENFPAAKKRLNENF 35 (114)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 4566667788999999999999998865
No 23
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=38.38 E-value=18 Score=26.41 Aligned_cols=29 Identities=7% Similarity=0.148 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
..+++.....+||++||.+.+..+++|.+
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 34 (125)
T 1ohp_A 6 HMTAVVQRYVAALNAGDLDGIVALFADDA 34 (125)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCe
Confidence 45677788888999999999999998874
No 24
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=36.76 E-value=20 Score=27.40 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.++++.....+||.+||.+.+..++++++
T Consensus 9 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 37 (140)
T 3i0y_A 9 RATGLVQAYYEAFNRGDWDAMLAFLAEDV 37 (140)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHcCCcE
Confidence 35678888889999999999999998875
No 25
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=36.11 E-value=24 Score=26.37 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+..+++.....+||.+||.+.|..++++.+
T Consensus 7 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 36 (131)
T 1oh0_A 7 QEVQGLMARYIELVDVGDIEAIVQMYADDA 36 (131)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHcCCCE
Confidence 345677788889999999999999988764
No 26
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=36.05 E-value=28 Score=26.38 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.++++....+||.++|.+.+.++++|++
T Consensus 5 ~~~~v~~~~~~~~~~d~~~~~~~~a~d~ 32 (128)
T 3ehc_A 5 LNDIYLAYLDSLNHQAFDELGTFVDDNV 32 (128)
T ss_dssp HHHHHHHHHHHHHTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCcce
Confidence 4678888889999999999999998754
No 27
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=35.94 E-value=22 Score=28.07 Aligned_cols=28 Identities=14% Similarity=0.245 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEK 194 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~ 194 (301)
..+++.....+||.+||.+.|.++++|+
T Consensus 30 ~~~~~v~~~~~a~~~gD~~~l~~l~a~D 57 (156)
T 1tuh_A 30 QNAETVRRGYAAFNSGDMKTLTELFDEN 57 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHhcCCC
Confidence 4566778888899999999999988765
No 28
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=35.57 E-value=1.6e+02 Score=23.22 Aligned_cols=99 Identities=8% Similarity=0.117 Sum_probs=53.7
Q ss_pred HHHHHHHHHHcCCHHHHHHhhcHHHHHH--------HHHHHHHhhccCCceeeeeecccccceEEEEEEeeecccccCCC
Q 022189 171 LYKEINTLMANGDKTSLRKAVTEKMYSA--------LKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNKV 242 (301)
Q Consensus 171 iy~~I~~A~a~gD~~~Lr~lvTe~~y~~--------l~~~Ik~R~~~g~~v~W~lv~~le~~rvv~~rli~I~~~d~~~~ 242 (301)
+=.+-.+|..+||.+.|..|+.+++... -..-|......+ .+.|.- +...-..|. ..++
T Consensus 14 le~~~~~A~~~~D~~~L~~LL~ddf~~v~~sG~~~~K~~~L~~~~~~~-~~~~~~---------~~~~~~~vr---~~gd 80 (129)
T 3ksp_A 14 LLSERHAYLMEGNREAMHQLLSSDFSFIDGQGRQFDAETYLDHYVDPD-QIQWSN---------QISESMVVE---VFET 80 (129)
T ss_dssp HHHHHHHHHHHTCHHHHHHHEEEEEEEECTTCCEECHHHHHHHHSCTT-TEEEEE---------EEEEEEEEE---ECSS
T ss_pred HHHHHHHHHHhCCHHHHHhhcCCCEEEECCCCCCcCHHHHHHHhccCC-Ccccee---------ecccceeEE---EECC
Confidence 3455677899999999999998875421 122333222122 122211 111111111 2367
Q ss_pred EEEEEEEEEeEEeeeEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCCeEEEE
Q 022189 243 FVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAYWRLCG 297 (301)
Q Consensus 243 ~~QVTVRf~s~Q~~~iyD~~GrlV~Gs~d~~~dV~EyWVFeR~l~~~~~~WrL~g 297 (301)
.++||++....-. + .|..+.|. --+..+|+ |. ++.|||.+
T Consensus 81 ~AvVt~~~~~~~~---~--~g~~~~~~----~~~t~VW~--~~----~g~Wrlva 120 (129)
T 3ksp_A 81 TALVQEIVEDHFS---Y--GRSMYIGR----FRSVSLYH--WA----NEGWKWHF 120 (129)
T ss_dssp EEEEEEEEEEEEE---E--TTEEEEEE----EEEEEEEE--EE----TTEEEEEE
T ss_pred EEEEEEEEEEEEe---c--CCeEEeEE----EEEEEEEE--Ee----CCeeEEEE
Confidence 8999888765442 2 24444332 34678884 33 57899975
No 29
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=35.36 E-value=22 Score=26.80 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
..+++.....+||.+||.+.+..+++|++
T Consensus 4 ~~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 32 (132)
T 3ebt_A 4 NNMQTVRESYEAFHRRDLPGVLAALAPDV 32 (132)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred hHHHHHHHHHHHHhccCHHHHHHhcCCCE
Confidence 34677888889999999999999998875
No 30
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=35.01 E-value=22 Score=26.36 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
++..++.....+|+.+||.+.|..++++++
T Consensus 6 ~~i~~l~~~~~~A~~~~D~~~l~~l~~~d~ 35 (123)
T 2r4i_A 6 DVILDCEKKLLTAIQNNDVESLEVLLHDDL 35 (123)
T ss_dssp HHHTHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhhCcCe
Confidence 455678888999999999999999998864
No 31
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=34.39 E-value=20 Score=27.85 Aligned_cols=29 Identities=10% Similarity=0.030 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
..+++.....+|+++||.+.|..|+++.+
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~l~~llaeD~ 34 (128)
T 3en8_A 6 KIREALNAHWQASAAGDFDAEHDIYDDDA 34 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCE
Confidence 45678888899999999999999998765
No 32
>2r25_A Phosphorelay intermediate protein YPD1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: a.24.10.2 PDB: 1c03_A 1oxk_A 1oxb_A 1c02_A 1qsp_A
Probab=33.91 E-value=47 Score=28.08 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=30.3
Q ss_pred CCCCh---HHHHHHHHHHHHHHHHHHH-cCCHHHHHHhhc
Q 022189 157 SGYSK---QKFYTEAVDLYKEINTLMA-NGDKTSLRKAVT 192 (301)
Q Consensus 157 ~~Fd~---~~F~~~Ak~iy~~I~~A~a-~gD~~~Lr~lvT 192 (301)
|+|.. ..|++.|...+..|.+|++ .+|.+.|+.++.
T Consensus 25 p~Fv~elV~~F~edse~~l~~L~~AL~~~~D~~~L~~~aH 64 (167)
T 2r25_A 25 SDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGH 64 (167)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHhcccCHHHHHHHHH
Confidence 45643 5899999999999999999 999999986654
No 33
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=33.30 E-value=20 Score=27.37 Aligned_cols=30 Identities=13% Similarity=0.344 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+..+++.....+||.+||.+.|..++++.+
T Consensus 17 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 46 (129)
T 3fh1_A 17 EQTAEIMRRFNDVFQLHDPAALPELIAEEC 46 (129)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGHHHHEEEEE
T ss_pred hhHHHHHHHHHHHHHccCHHHHHHhcCCCE
Confidence 345667778888999999999999987654
No 34
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=32.60 E-value=27 Score=28.13 Aligned_cols=30 Identities=10% Similarity=0.137 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 196 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~y 196 (301)
+-.++.....+|+.+||.+.+.++|+|.+-
T Consensus 13 eI~~~~~~~~~Ai~~gD~~~~~~l~~~dv~ 42 (143)
T 2f86_B 13 DIVRVTQTLLDAISCKDFETYTRLCDTSMT 42 (143)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHccCHHHHHHhcCCCEE
Confidence 334567889999999999999999887654
No 35
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=32.52 E-value=15 Score=28.51 Aligned_cols=27 Identities=15% Similarity=0.174 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 169 VDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 169 k~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+++.....+||.+||.+.|..++++++
T Consensus 25 ~~~v~~~~~a~~~~D~~~l~~l~a~D~ 51 (149)
T 1nww_A 25 EKIVLEFMDALTSNDAAKLIEYFAEDT 51 (149)
T ss_dssp HHHHHHHHHHGGGCCHHHHHTTBCSSC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHhCCCE
Confidence 455666788999999999999998764
No 36
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=30.85 E-value=27 Score=26.81 Aligned_cols=29 Identities=3% Similarity=0.070 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKMY 196 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~y 196 (301)
.+++.....+|+.+||.+.|..+++|++-
T Consensus 14 ~~~~v~~~~~a~~~gD~~~~~~l~a~D~~ 42 (140)
T 3ec9_A 14 PYQIVADHYAASDRHDPAAMMADIAPAIE 42 (140)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHhcCCCeE
Confidence 46677888889999999999999887753
No 37
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=30.74 E-value=30 Score=27.10 Aligned_cols=30 Identities=10% Similarity=0.000 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+..+++.....+||.+||.+.+.+++++++
T Consensus 4 ~~~~~~v~~~~~a~~~~d~~~~~~~~a~D~ 33 (152)
T 2gex_A 4 TANKERCLEMVAAWNRWDVSGVVAHWAPDV 33 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHcCCCe
Confidence 345678888889999999999999988643
No 38
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=30.49 E-value=31 Score=26.94 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
..+++.....+||.+||.+.|..+++|++
T Consensus 16 ~~~~~v~~f~~a~~~gD~~~l~~l~a~D~ 44 (149)
T 2bng_A 16 EAIRAVEAFLNALQNEDFDTVDAALGDDL 44 (149)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHcCCCE
Confidence 45667788889999999999999998764
No 39
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=30.36 E-value=37 Score=25.36 Aligned_cols=29 Identities=10% Similarity=-0.069 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
..+++.....+|+++||.+.+..+.+|.+
T Consensus 12 ~i~~~~~~~~~a~~~~D~~~~~~l~a~D~ 40 (135)
T 3d9r_A 12 VIEAAAIAYLTAFNRADIPAVIATYTDDG 40 (135)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCCCE
Confidence 45667788899999999999999888764
No 40
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=30.31 E-value=28 Score=25.94 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 169 VDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 169 k~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+++.....+||+++|.+.+..++++.+
T Consensus 5 ~~~v~~~~~a~n~~D~~~~~~~~a~D~ 31 (117)
T 3ff2_A 5 LETAKAMIAAYNAQDVDTYVSYMTDDA 31 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHcccCHHHHHHhcCCcE
Confidence 567778889999999999999998776
No 41
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=30.06 E-value=32 Score=25.75 Aligned_cols=29 Identities=7% Similarity=-0.129 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.++++.....+||++||.+.+..++++.+
T Consensus 4 ~~~~~v~~~~~a~n~~D~~~~~~~~a~D~ 32 (123)
T 2k54_A 4 EIELPVQKQLEAYNARDIDAFMAWWADDC 32 (123)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred CHHHHHHHHHHHHHhcCHHHHHhhcCCce
Confidence 35667777889999999999999988875
No 42
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=29.64 E-value=23 Score=27.75 Aligned_cols=28 Identities=4% Similarity=0.215 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
++++.....+||++||.+.|..+++|++
T Consensus 6 ~~~~v~~~~~a~~~gD~~~l~~l~a~Dv 33 (143)
T 3dm8_A 6 LWRFSRALHRALNDRQTEELATIIDDNI 33 (143)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHhcCCCe
Confidence 3566777889999999999999987664
No 43
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=28.13 E-value=31 Score=27.46 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKMY 196 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~y 196 (301)
++++.....+||.+||.+.+.++++|.+-
T Consensus 22 ~~~lv~~~~~a~~~~D~~~l~~l~a~D~v 50 (151)
T 3f7x_A 22 ATELVNAYYAAFNAGDMPAFLALLSEDVI 50 (151)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCEE
Confidence 46777888899999999999999987764
No 44
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=27.50 E-value=35 Score=26.17 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
..+++.....+||.+||.+.|..+++|++
T Consensus 11 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 39 (150)
T 1s5a_A 11 KACETLRKFMAYMLEKDMKSWTELWDENA 39 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHhCCCCE
Confidence 35677888889999999999999988765
No 45
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=25.09 E-value=25 Score=29.22 Aligned_cols=30 Identities=3% Similarity=0.018 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 196 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~y 196 (301)
..+++.....+||++||.+.|..+++|.+-
T Consensus 11 ~~~~~v~ry~~A~n~gD~d~l~~l~aeD~v 40 (156)
T 3g16_A 11 AMEKVIRTYYDGCNEADEAKMIACFVPEAV 40 (156)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEE
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHhcCCCEE
Confidence 345667778889999999999999977654
No 46
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=24.80 E-value=42 Score=26.81 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKMY 196 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~y 196 (301)
.+++.....+||.+||.+.|..+++|++.
T Consensus 25 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~v 53 (163)
T 1z1s_A 25 AKEILVHSLRLLENGDARGWCDLFHPEGV 53 (163)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCEE
Confidence 45677778899999999999999998864
No 47
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=23.78 E-value=14 Score=29.63 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 166 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 166 ~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
+.+++++...++|+.+||.+.|..+++|++
T Consensus 9 ~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~ 38 (143)
T 3mso_A 9 ANAAATLAEWHGLIARRDLSGLPRLLHPDA 38 (143)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTGGGGEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCE
Confidence 456788899999999999999999887654
No 48
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=23.74 E-value=40 Score=26.54 Aligned_cols=28 Identities=21% Similarity=0.424 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 168 AVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 168 Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.+++.....+|+.+||.+.|.++++|.+
T Consensus 22 n~~~v~~~~~a~~~gD~~~l~~l~a~D~ 49 (148)
T 3g8z_A 22 TIDIAKSYITAIQTGDHATLGSIISPDV 49 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHcCCCE
Confidence 4667788889999999999999988764
No 49
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=23.57 E-value=2.8e+02 Score=22.90 Aligned_cols=45 Identities=18% Similarity=0.261 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHhhcH-HHHHHHHHHHHHhh
Q 022189 163 KFYTEAVDLYKEINTLMANGDKTSLRKAVTE-KMYSALKNEIKQRE 207 (301)
Q Consensus 163 ~F~~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe-~~y~~l~~~Ik~R~ 207 (301)
......++....+.++|..+|.+.....|.. ..+..+..+|++..
T Consensus 124 ~~~~~~~~~~~~l~~~~~~~d~~~A~~~~~kL~f~~kl~~~i~~~~ 169 (174)
T 3hho_A 124 KVTAMQRHYLAQLQGQLAQSEWLAAADQIRKLKFIAKLKNEVERVE 169 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566788999999999999999888877 66678888888764
No 50
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=23.49 E-value=40 Score=26.67 Aligned_cols=28 Identities=18% Similarity=0.084 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEK 194 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~ 194 (301)
..+++.....+||.+||.+.+.++++|+
T Consensus 5 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D 32 (158)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPD 32 (158)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 4567788888899999999999998764
No 51
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=23.33 E-value=24 Score=26.48 Aligned_cols=25 Identities=12% Similarity=0.175 Sum_probs=21.0
Q ss_pred HHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 171 LYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 171 iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.-....+||++||.+.+..++++.+
T Consensus 5 ~v~~~~~a~~~gD~~~~~~~ladDv 29 (112)
T 3f14_A 5 THYSIAQHFSSGDFPAVYACFNDII 29 (112)
T ss_dssp HHHHHHHHHHTTCGGGTGGGEEEEE
T ss_pred HHHHHHHHHHcCCHHHHHHhcCCce
Confidence 4567788999999999999998764
No 52
>2a0b_A HPT domain; sensory transduction, histidine kinase, phosphotransfer, two-component system, four-helix bundle; 1.57A {Escherichia coli} SCOP: a.24.10.1 PDB: 1bdj_B 1fr0_A 1a0b_A
Probab=23.11 E-value=99 Score=23.71 Aligned_cols=29 Identities=10% Similarity=0.116 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHh
Q 022189 162 QKFYTEAVDLYKEINTLMANGDKTSLRKA 190 (301)
Q Consensus 162 ~~F~~~Ak~iy~~I~~A~a~gD~~~Lr~l 190 (301)
..|++++.+....+.+|+.++|.+.++..
T Consensus 34 ~~F~~e~~~~l~~L~~a~~~~d~~~~~~~ 62 (125)
T 2a0b_A 34 AVFEKMMPGYVSVLESNLTAQDKKGIVEE 62 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHcCCHHHHHHH
Confidence 57999999999999999999998876644
No 53
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=21.59 E-value=59 Score=24.68 Aligned_cols=29 Identities=7% Similarity=0.018 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 167 EAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 167 ~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.++++.....+||++||.+.+..+.++.+
T Consensus 8 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 36 (139)
T 2a15_A 8 PALIASQSSWRCVQAHDREGWLALMADDV 36 (139)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHhcCCCE
Confidence 35667778888999999999999988874
No 54
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=20.55 E-value=83 Score=24.56 Aligned_cols=33 Identities=6% Similarity=0.099 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 163 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 163 ~F~~~Ak~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
.-..+..++|....+|+..+|.+.|..+.++..
T Consensus 8 ~~~~eI~~~~~~y~~Al~~~D~~~L~~lf~~d~ 40 (129)
T 2owp_A 8 DIVAQVQAAFVEYERALVENDIEAMNALFWHTP 40 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHTBCCST
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHhhccCCC
Confidence 345667788999999999999999999998875
No 55
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=20.31 E-value=27 Score=27.72 Aligned_cols=26 Identities=4% Similarity=0.047 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022189 170 DLYKEINTLMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 170 ~iy~~I~~A~a~gD~~~Lr~lvTe~~ 195 (301)
++...-.+||++||.+.+..+++|.+
T Consensus 29 eiv~~y~~A~n~~D~d~~~~l~a~D~ 54 (158)
T 4h3u_A 29 EIVTAWAAAWTGTNPNALGTLFAADG 54 (158)
T ss_dssp HHHHHHHHHHHSSCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHHhcccc
Confidence 56667789999999999999988764
No 56
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=20.27 E-value=2e+02 Score=22.56 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHH-HHHcCCHHHHHHhhcHHH
Q 022189 166 TEAVDLYKEINT-LMANGDKTSLRKAVTEKM 195 (301)
Q Consensus 166 ~~Ak~iy~~I~~-A~a~gD~~~Lr~lvTe~~ 195 (301)
+..+++.....+ +|.+||.+.+.+++++.+
T Consensus 27 ~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~ 57 (148)
T 3g0k_A 27 QANHDLVIEMYNKVLIAMDSSAVDRYIAPGY 57 (148)
T ss_dssp HHHHHHHHHHHHHTTTTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhcCcCe
Confidence 444666777777 899999999999998764
Done!