Query 022191
Match_columns 301
No_of_seqs 142 out of 1612
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 08:43:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022191.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022191hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 5.3E-33 1.1E-37 247.1 24.5 257 14-274 2-297 (302)
2 PTZ00343 triose or hexose phos 100.0 1.7E-31 3.6E-36 241.3 29.0 260 11-271 46-349 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 1.7E-31 3.8E-36 233.0 12.2 273 4-277 7-314 (316)
4 PLN00411 nodulin MtN21 family 100.0 1E-26 2.3E-31 209.5 28.9 229 43-276 74-334 (358)
5 KOG1443 Predicted integral mem 100.0 1.2E-27 2.7E-32 201.8 17.7 266 4-270 6-315 (349)
6 PF06027 DUF914: Eukaryotic pr 99.9 4.3E-25 9.4E-30 195.3 24.3 227 43-276 75-311 (334)
7 PRK11272 putative DMT superfam 99.9 1.7E-23 3.7E-28 185.1 27.8 223 42-273 63-288 (292)
8 PRK15430 putative chlorampheni 99.9 1.7E-23 3.6E-28 185.5 26.1 213 51-273 76-288 (296)
9 PF08449 UAA: UAA transporter 99.9 1.3E-23 2.7E-28 186.8 25.1 225 48-275 64-302 (303)
10 TIGR00950 2A78 Carboxylate/Ami 99.9 2.4E-23 5.3E-28 181.1 26.2 218 43-266 42-260 (260)
11 PRK11689 aromatic amino acid e 99.9 5.3E-23 1.1E-27 182.2 25.6 213 49-272 62-289 (295)
12 PRK11453 O-acetylserine/cystei 99.9 8.2E-23 1.8E-27 181.4 25.0 221 51-273 61-290 (299)
13 PRK10532 threonine and homoser 99.9 6.5E-22 1.4E-26 175.1 27.2 218 41-274 65-285 (293)
14 KOG1444 Nucleotide-sugar trans 99.9 6.6E-23 1.4E-27 175.5 19.0 268 8-279 6-309 (314)
15 TIGR03340 phn_DUF6 phosphonate 99.9 2.1E-21 4.5E-26 170.9 21.0 220 45-267 60-280 (281)
16 KOG2765 Predicted membrane pro 99.8 1.5E-19 3.3E-24 157.0 18.9 226 46-273 157-393 (416)
17 COG0697 RhaT Permeases of the 99.8 4.7E-18 1E-22 149.6 27.8 213 48-271 70-288 (292)
18 PF04142 Nuc_sug_transp: Nucle 99.8 1.4E-17 3.1E-22 142.5 22.1 210 43-260 13-243 (244)
19 COG5070 VRG4 Nucleotide-sugar 99.8 1.8E-18 3.8E-23 140.3 13.2 259 16-279 8-305 (309)
20 TIGR00688 rarD rarD protein. T 99.8 1.2E-17 2.7E-22 145.0 19.0 186 48-244 70-255 (256)
21 KOG1580 UDP-galactose transpor 99.8 2.3E-18 5E-23 140.7 12.8 234 37-274 75-317 (337)
22 KOG1581 UDP-galactose transpor 99.8 3.6E-17 7.9E-22 138.7 20.4 236 34-274 71-317 (327)
23 KOG1442 GDP-fucose transporter 99.8 3.8E-20 8.2E-25 154.2 0.9 228 47-277 101-334 (347)
24 KOG2234 Predicted UDP-galactos 99.8 3.3E-16 7E-21 136.5 22.7 224 44-275 89-327 (345)
25 TIGR00776 RhaT RhaT L-rhamnose 99.8 2.2E-16 4.7E-21 139.4 21.7 212 45-270 56-288 (290)
26 COG2962 RarD Predicted permeas 99.8 5.9E-16 1.3E-20 131.3 23.1 218 49-277 73-290 (293)
27 KOG4510 Permease of the drug/m 99.7 1.4E-18 2.9E-23 144.6 2.7 216 49-272 98-327 (346)
28 COG5006 rhtA Threonine/homoser 99.7 1.3E-15 2.8E-20 126.1 17.8 220 40-274 64-286 (292)
29 PF03151 TPT: Triose-phosphate 99.7 5.6E-16 1.2E-20 123.9 14.8 141 129-270 1-153 (153)
30 KOG3912 Predicted integral mem 99.7 4.4E-15 9.6E-20 124.5 19.8 260 8-272 36-336 (372)
31 KOG1583 UDP-N-acetylglucosamin 99.7 2E-16 4.3E-21 132.4 8.6 243 26-275 46-319 (330)
32 KOG1582 UDP-galactose transpor 99.5 4.6E-13 9.9E-18 112.1 15.1 220 50-272 108-334 (367)
33 KOG2766 Predicted membrane pro 99.5 5.3E-15 1.2E-19 122.5 0.8 213 52-273 82-302 (336)
34 TIGR00803 nst UDP-galactose tr 99.3 3.5E-11 7.5E-16 102.3 12.1 190 73-268 3-222 (222)
35 PF00892 EamA: EamA-like trans 99.2 1E-10 2.3E-15 89.6 10.8 125 138-269 1-125 (126)
36 KOG4314 Predicted carbohydrate 99.2 5.1E-11 1.1E-15 95.5 8.7 225 41-272 46-278 (290)
37 COG2510 Predicted membrane pro 99.1 8E-10 1.7E-14 82.5 10.7 134 130-269 5-138 (140)
38 PF06800 Sugar_transport: Suga 99.1 3.7E-08 8E-13 84.6 21.8 214 40-267 36-268 (269)
39 PF13536 EmrE: Multidrug resis 99.0 1.7E-09 3.8E-14 81.8 7.3 74 50-124 36-110 (113)
40 TIGR00688 rarD rarD protein. T 98.9 1.1E-07 2.3E-12 82.6 15.8 135 129-269 3-141 (256)
41 PRK15430 putative chlorampheni 98.9 9.4E-08 2E-12 84.8 15.7 137 126-269 6-144 (296)
42 TIGR03340 phn_DUF6 phosphonate 98.8 1.1E-07 2.4E-12 83.7 15.0 132 130-270 3-135 (281)
43 PF00892 EamA: EamA-like trans 98.8 5.5E-08 1.2E-12 74.3 9.3 79 40-118 46-124 (126)
44 COG2510 Predicted membrane pro 98.7 1.2E-07 2.6E-12 71.0 7.8 89 31-120 51-139 (140)
45 PLN00411 nodulin MtN21 family 98.6 1.3E-06 2.8E-11 79.3 15.5 136 130-270 15-156 (358)
46 PRK15051 4-amino-4-deoxy-L-ara 98.6 6.1E-07 1.3E-11 67.4 10.2 67 53-119 42-108 (111)
47 PF05653 Mg_trans_NIPA: Magnes 98.5 7.2E-06 1.6E-10 72.6 15.2 69 51-119 53-121 (300)
48 PRK02971 4-amino-4-deoxy-L-ara 98.4 2.3E-05 5.1E-10 60.3 14.7 120 129-272 3-124 (129)
49 PRK13499 rhamnose-proton sympo 98.4 0.00022 4.8E-09 63.9 22.9 223 42-270 68-341 (345)
50 TIGR00950 2A78 Carboxylate/Ami 98.3 1.1E-05 2.3E-10 70.0 12.9 118 141-270 2-119 (260)
51 PRK11689 aromatic amino acid e 98.3 2.9E-05 6.4E-10 68.8 14.8 130 128-270 4-137 (295)
52 PRK11453 O-acetylserine/cystei 98.3 6.9E-05 1.5E-09 66.6 16.4 125 130-270 6-132 (299)
53 PTZ00343 triose or hexose phos 98.2 7.2E-05 1.6E-09 68.0 16.7 126 139-270 60-186 (350)
54 PRK11272 putative DMT superfam 98.2 6.5E-05 1.4E-09 66.5 15.9 131 130-270 10-141 (292)
55 PF13536 EmrE: Multidrug resis 98.2 2.1E-05 4.6E-10 59.3 10.6 63 209-273 47-109 (113)
56 COG2962 RarD Predicted permeas 98.1 8.6E-05 1.9E-09 63.9 13.0 139 126-270 5-144 (293)
57 PRK02971 4-amino-4-deoxy-L-ara 98.1 6.5E-05 1.4E-09 57.9 10.5 73 50-122 50-124 (129)
58 PRK15051 4-amino-4-deoxy-L-ara 98.1 0.00026 5.7E-09 53.1 13.5 59 210-269 50-108 (111)
59 PF08449 UAA: UAA transporter 98.0 0.00018 3.8E-09 64.1 14.7 128 142-275 14-141 (303)
60 TIGR00817 tpt Tpt phosphate/ph 98.0 0.00032 6.8E-09 62.4 15.9 121 142-269 16-136 (302)
61 TIGR00776 RhaT RhaT L-rhamnose 98.0 0.00011 2.4E-09 65.0 12.8 132 129-272 2-138 (290)
62 PF06027 DUF914: Eukaryotic pr 97.9 0.00062 1.3E-08 61.0 14.6 142 127-272 12-153 (334)
63 COG0697 RhaT Permeases of the 97.9 0.0014 3.1E-08 57.2 16.8 141 127-274 6-147 (292)
64 PRK10532 threonine and homoser 97.8 0.00018 3.9E-09 63.7 10.9 65 55-119 216-280 (293)
65 PF04657 DUF606: Protein of un 97.8 0.0022 4.7E-08 50.1 14.7 132 130-267 3-138 (138)
66 KOG2922 Uncharacterized conser 97.7 0.00026 5.6E-09 61.7 9.3 71 50-120 66-136 (335)
67 PRK10452 multidrug efflux syst 97.6 0.00079 1.7E-08 51.0 10.1 70 51-120 33-103 (120)
68 PRK09541 emrE multidrug efflux 97.5 0.0021 4.6E-08 48.0 11.1 70 51-120 33-103 (110)
69 COG4975 GlcU Putative glucose 97.5 1.4E-05 3E-10 66.8 -0.9 217 39-269 51-284 (288)
70 COG2076 EmrE Membrane transpor 97.5 0.0018 3.9E-08 47.6 9.5 70 51-120 33-103 (106)
71 PF03151 TPT: Triose-phosphate 97.4 0.0014 3.1E-08 51.8 8.8 73 46-118 79-151 (153)
72 PRK10452 multidrug efflux syst 97.4 0.0039 8.5E-08 47.2 10.6 58 214-272 47-105 (120)
73 PRK10650 multidrug efflux syst 97.3 0.0077 1.7E-07 44.8 11.9 68 51-118 38-106 (109)
74 PRK11431 multidrug efflux syst 97.3 0.0063 1.4E-07 45.0 11.3 69 51-119 32-101 (105)
75 PRK10650 multidrug efflux syst 97.2 0.014 3E-07 43.4 11.6 55 214-269 52-107 (109)
76 PF04142 Nuc_sug_transp: Nucle 97.1 0.0029 6.4E-08 54.4 8.4 77 198-275 18-94 (244)
77 PRK13499 rhamnose-proton sympo 97.1 0.0083 1.8E-07 53.9 11.2 138 127-273 6-156 (345)
78 PRK09541 emrE multidrug efflux 97.0 0.0063 1.4E-07 45.5 8.8 58 214-272 47-105 (110)
79 PRK11431 multidrug efflux syst 97.0 0.013 2.7E-07 43.4 10.2 55 215-270 47-102 (105)
80 PF00893 Multi_Drug_Res: Small 97.0 0.0093 2E-07 43.2 9.0 60 52-111 33-93 (93)
81 PF05653 Mg_trans_NIPA: Magnes 96.9 0.0078 1.7E-07 53.4 9.9 119 125-270 4-122 (300)
82 COG2076 EmrE Membrane transpor 96.9 0.024 5.2E-07 41.7 10.5 55 216-271 49-104 (106)
83 COG3238 Uncharacterized protei 96.8 0.087 1.9E-06 41.4 13.9 139 127-270 4-146 (150)
84 KOG4510 Permease of the drug/m 96.8 0.00042 9.1E-09 58.9 0.5 135 128-273 38-172 (346)
85 PF10639 UPF0546: Uncharacteri 96.5 0.0097 2.1E-07 44.4 6.3 65 54-118 47-112 (113)
86 PF07857 DUF1632: CEO family ( 96.4 0.011 2.4E-07 50.9 6.8 133 129-275 1-139 (254)
87 KOG2234 Predicted UDP-galactos 96.3 0.19 4E-06 44.9 14.2 138 131-269 18-163 (345)
88 COG5006 rhtA Threonine/homoser 96.3 0.02 4.4E-07 48.5 7.5 56 61-116 223-278 (292)
89 PF06800 Sugar_transport: Suga 96.2 0.034 7.4E-07 48.2 8.9 113 159-276 11-128 (269)
90 PF00893 Multi_Drug_Res: Small 95.9 0.09 2E-06 38.0 8.8 48 213-261 45-93 (93)
91 KOG1580 UDP-galactose transpor 95.9 0.032 7E-07 46.8 6.9 132 137-275 22-162 (337)
92 TIGR00803 nst UDP-galactose tr 95.3 0.035 7.5E-07 47.0 5.4 67 51-117 155-221 (222)
93 KOG2765 Predicted membrane pro 94.1 0.091 2E-06 47.1 5.0 74 200-274 162-235 (416)
94 COG4975 GlcU Putative glucose 94.0 0.027 5.8E-07 47.6 1.4 132 129-273 3-139 (288)
95 PF04657 DUF606: Protein of un 93.6 0.96 2.1E-05 35.2 9.5 72 46-117 62-138 (138)
96 PF06379 RhaT: L-rhamnose-prot 93.5 2.2 4.7E-05 38.2 12.5 143 127-277 6-160 (344)
97 KOG1581 UDP-galactose transpor 92.7 2.4 5.3E-05 37.2 11.3 130 140-275 26-160 (327)
98 PF10639 UPF0546: Uncharacteri 91.1 0.6 1.3E-05 34.9 5.1 53 214-267 58-111 (113)
99 KOG4314 Predicted carbohydrate 90.1 0.32 7E-06 39.8 3.2 62 211-273 67-128 (290)
100 KOG2922 Uncharacterized conser 86.9 0.23 5.1E-06 43.7 0.5 122 124-272 17-138 (335)
101 KOG1444 Nucleotide-sugar trans 86.8 21 0.00046 31.7 12.4 133 130-269 14-148 (314)
102 PF06379 RhaT: L-rhamnose-prot 86.2 25 0.00055 31.6 20.5 222 47-269 72-339 (344)
103 KOG1441 Glucose-6-phosphate/ph 85.4 0.82 1.8E-05 40.8 3.2 121 143-267 32-152 (316)
104 PF02694 UPF0060: Uncharacteri 79.8 3.9 8.4E-05 30.0 4.3 44 226-270 60-103 (107)
105 PRK02237 hypothetical protein; 79.8 4.5 9.7E-05 29.8 4.6 44 226-270 62-105 (109)
106 COG3238 Uncharacterized protei 79.7 17 0.00036 28.7 8.1 71 48-118 69-144 (150)
107 COG5070 VRG4 Nucleotide-sugar 78.6 5.2 0.00011 33.7 5.2 67 46-112 222-288 (309)
108 KOG3912 Predicted integral mem 76.9 34 0.00073 30.1 9.7 56 214-270 103-158 (372)
109 PF02694 UPF0060: Uncharacteri 72.7 6.1 0.00013 29.0 3.7 39 83-121 66-104 (107)
110 PRK02237 hypothetical protein; 70.6 6.9 0.00015 28.8 3.6 39 83-121 68-106 (109)
111 PF04342 DUF486: Protein of un 69.2 6.5 0.00014 28.8 3.2 29 238-267 77-105 (108)
112 COG1742 Uncharacterized conser 66.0 13 0.00029 27.1 4.2 39 83-121 67-105 (109)
113 PF04342 DUF486: Protein of un 63.3 58 0.0012 24.0 8.8 55 64-118 51-106 (108)
114 KOG2766 Predicted membrane pro 61.8 0.92 2E-05 38.9 -2.7 62 210-272 91-152 (336)
115 PF07168 Ureide_permease: Urei 60.4 6.6 0.00014 34.6 2.2 70 198-269 73-145 (336)
116 PF05977 MFS_3: Transmembrane 58.1 91 0.002 30.1 9.8 50 218-268 341-390 (524)
117 PF15471 TMEM171: Transmembran 57.6 8.8 0.00019 33.0 2.4 27 250-276 159-185 (319)
118 PRK06638 NADH:ubiquinone oxido 56.8 1.1E+02 0.0024 25.3 11.6 25 238-263 133-157 (198)
119 KOG1443 Predicted integral mem 55.9 40 0.00087 29.9 6.2 58 214-272 101-158 (349)
120 PF05297 Herpes_LMP1: Herpesvi 54.9 4 8.7E-05 35.4 0.0 111 54-167 28-143 (381)
121 KOG4831 Unnamed protein [Funct 50.2 19 0.0004 26.5 2.8 59 60-118 64-123 (125)
122 COG3169 Uncharacterized protei 46.8 29 0.00063 25.1 3.3 30 238-268 84-113 (116)
123 COG1742 Uncharacterized conser 44.6 26 0.00056 25.7 2.8 44 226-270 61-104 (109)
124 PF07444 Ycf66_N: Ycf66 protei 44.5 24 0.00051 24.9 2.5 25 250-274 5-29 (84)
125 PF07857 DUF1632: CEO family ( 43.8 2.2E+02 0.0047 24.7 9.2 71 49-119 56-133 (254)
126 PF05961 Chordopox_A13L: Chord 42.5 29 0.00063 23.1 2.5 24 252-275 4-27 (68)
127 COG3086 RseC Positive regulato 41.3 66 0.0014 25.2 4.7 26 219-244 70-95 (150)
128 PRK11357 frlA putative fructos 38.8 3.3E+02 0.0071 25.4 14.9 21 255-275 418-438 (445)
129 PF01102 Glycophorin_A: Glycop 36.0 32 0.0007 26.1 2.3 6 293-298 111-116 (122)
130 MTH00057 ND6 NADH dehydrogenas 35.3 2.5E+02 0.0054 23.0 9.3 25 238-263 132-156 (186)
131 PF04246 RseC_MucC: Positive r 33.4 75 0.0016 24.3 4.1 24 222-245 66-89 (135)
132 KOG1442 GDP-fucose transporter 33.1 23 0.00051 30.9 1.3 54 214-268 119-172 (347)
133 PF15102 TMEM154: TMEM154 prot 32.6 37 0.00079 26.6 2.1 23 255-277 66-88 (146)
134 PF09656 PGPGW: Putative trans 31.3 1.4E+02 0.0031 19.0 4.6 45 104-153 5-49 (53)
135 KOG1583 UDP-N-acetylglucosamin 31.2 31 0.00067 30.2 1.7 69 207-276 74-143 (330)
136 PHA03049 IMV membrane protein; 30.8 58 0.0013 21.7 2.5 23 253-275 5-27 (68)
137 KOG1582 UDP-galactose transpor 30.7 2.2E+02 0.0048 25.0 6.7 54 69-122 281-334 (367)
138 PF09964 DUF2198: Uncharacteri 30.7 1.3E+02 0.0029 20.5 4.3 32 96-127 16-47 (74)
139 PRK10644 arginine:agmatin anti 29.2 4.7E+02 0.01 24.3 9.7 40 232-272 389-428 (445)
140 PF11044 TMEMspv1-c74-12: Plec 28.8 59 0.0013 19.7 2.1 17 250-266 2-18 (49)
141 COG3169 Uncharacterized protei 28.8 87 0.0019 22.7 3.3 30 89-118 84-113 (116)
142 TIGR00910 2A0307_GadC glutamat 28.7 5.3E+02 0.011 24.7 14.6 15 159-173 330-344 (507)
143 PRK10655 potE putrescine trans 27.3 5E+02 0.011 24.0 16.2 25 253-277 409-433 (438)
144 TIGR01167 LPXTG_anchor LPXTG-m 26.2 84 0.0018 17.3 2.5 17 250-266 10-26 (34)
145 PRK10862 SoxR reducing system 25.7 1.4E+02 0.0031 23.6 4.5 16 226-241 77-92 (154)
146 PF06570 DUF1129: Protein of u 25.4 3.9E+02 0.0084 22.1 10.1 23 127-149 178-200 (206)
147 PRK13108 prolipoprotein diacyl 25.3 4.6E+02 0.0099 25.0 8.4 24 250-273 254-277 (460)
148 PHA02898 virion envelope prote 24.8 2.6E+02 0.0056 19.8 5.0 19 255-274 53-71 (92)
149 PF06570 DUF1129: Protein of u 23.8 4.2E+02 0.0091 21.9 10.7 24 129-152 112-135 (206)
150 PF02355 SecD_SecF: Protein ex 22.6 4.2E+02 0.009 21.7 6.9 37 226-263 59-95 (189)
151 PRK09776 putative diguanylate 21.8 9.4E+02 0.02 25.2 13.2 23 129-151 71-93 (1092)
152 COG2851 CitM H+/citrate sympor 21.1 85 0.0018 28.8 2.6 14 250-263 178-191 (433)
153 PRK10921 twin-arginine protein 21.0 1.7E+02 0.0037 25.4 4.5 14 282-295 244-257 (258)
154 COG1971 Predicted membrane pro 20.6 1.9E+02 0.0041 23.8 4.3 41 224-265 41-82 (190)
155 TIGR00905 2A0302 transporter, 20.2 7.3E+02 0.016 23.3 16.5 22 253-274 417-438 (473)
156 TIGR02865 spore_II_E stage II 20.0 9.5E+02 0.021 24.6 13.4 44 75-118 11-54 (764)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=5.3e-33 Score=247.12 Aligned_cols=257 Identities=23% Similarity=0.267 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHhHHHHhhhccc------------------------------cccCCCCHHHHHHHHHHHHHHHHHHHH
Q 022191 14 LTYAYILLYIALSSGQIFFNKVM------------------------------KVEDGMTLEIYTTSVIPIGAMFAMTLW 63 (301)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~k~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (301)
++...++.|+..|+++.++||+. +++++.++++ .+.+++.++++..++.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSAL-LKLLLPVAIVHTIGHV 80 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHHHHHHHH
Confidence 56788999999999999999921 2334556776 5679999999999999
Q ss_pred HhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccccchHHHHHHHHHHHHHHHHH
Q 022191 64 LGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALR 143 (301)
Q Consensus 64 ~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~l~l~a~~~~a~~ 143 (301)
+.|.+++|++++.++++++++|+++++++++++|||++++++.+++++++|+.+...++.+++..|++++++|+++||+|
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~ 160 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR 160 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877666667778999999999999999
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccc--cc----Cc--chhHHHHHHHH-HHHHHHHHH
Q 022191 144 LIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL--ET----WH--FPPLMLTLNCL-CTFALNLSV 214 (301)
Q Consensus 144 ~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~----~~--~~~~~~~~~~~-~~~~~~~~~ 214 (301)
.++.|+..+++ +.|+.+++.|+...+.+.+.|.....|++..... .. +. ..+......++ .....+..+
T Consensus 161 ~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
T TIGR00817 161 NIFSKKAMTIK--SLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVA 238 (302)
T ss_pred HHHHHHhhccC--CCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987632 5789999999999999988888776554321110 00 11 11121223333 334445667
Q ss_pred HHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhch
Q 022191 215 FLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 215 ~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~ 274 (301)
+.++++++|+++++.++++|+.++++|++++||+ +++.+++|+++++.|+.+|++.|.+
T Consensus 239 ~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~-lt~~~~~G~~lil~Gv~l~~~~k~~ 297 (302)
T TIGR00817 239 FMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTK-ISPQQVFGTGIAIAGVFLYSRVKAQ 297 (302)
T ss_pred HHHHccCCchHHHHHhhhhhhheeeeehhhcCCC-CchhHHHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999999999 9999999999999999999976543
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.7e-31 Score=241.28 Aligned_cols=260 Identities=20% Similarity=0.277 Sum_probs=221.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhccc------------------------------cccCCCC-HHHHHHHHHHHHHHHH
Q 022191 11 EQVLTYAYILLYIALSSGQIFFNKVM------------------------------KVEDGMT-LEIYTTSVIPIGAMFA 59 (301)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~k~~------------------------------~~~~~~~-~~~~~~~~~~~~~~~~ 59 (301)
..+++..+++.|+.+|+...++||+. ++.++.+ +++.++.+++.|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999921 2223443 4555778999999998
Q ss_pred HHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccccchHHHHHHHHHHHHH
Q 022191 60 MTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVG 139 (301)
Q Consensus 60 ~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~l~l~a~~~ 139 (301)
......+.|+++++++.++++++++|+++++++++++|||++++++++++++++|+.+...++.+++..|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 87777889999999999999999999999999999999999999999999999999999888888888999999999999
Q ss_pred HHHHHHHHHHHHhhcCC---CCCHHHHHHHHhHHHHHHHHHHHHhhccccccc--------cccC--cchhHHHHHHHHH
Q 022191 140 EALRLIFMEILVKRKGL---KLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA--------LETW--HFPPLMLTLNCLC 206 (301)
Q Consensus 140 ~a~~~v~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~ 206 (301)
+|+++++.|+.+++++. +.++.++..+..+.+.+.++|.....|.+.... ...+ ...++.++.+++.
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~ 285 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVW 285 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Confidence 99999999999875431 367777888888899988888877666432110 0111 1223456777888
Q ss_pred HHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhh
Q 022191 207 TFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 271 (301)
Q Consensus 207 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~ 271 (301)
.++.+...+.++++++|.++++.++++|+++++.|++++||+ +++.+++|.++++.|+.+|++.
T Consensus 286 ~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~-lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 286 YYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQ-VTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCC-CchHhHHHHHHHHHHHHHHhhc
Confidence 888888888999999999999999999999999999999999 9999999999999999999865
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.97 E-value=1.7e-31 Score=232.97 Aligned_cols=273 Identities=33% Similarity=0.495 Sum_probs=239.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHhhhcccc--------------------------------ccCCCCHHHHHHHH
Q 022191 4 RERRMFREQVLTYAYILLYIALSSGQIFFNKVMK--------------------------------VEDGMTLEIYTTSV 51 (301)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~--------------------------------~~~~~~~~~~~~~~ 51 (301)
..++..++.+....+...|++++++..++||+.. +.++.+.+..++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~l 86 (316)
T KOG1441|consen 7 PASGQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTL 86 (316)
T ss_pred CcccccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHH
Confidence 3445566888899999999999999999999531 23344466778899
Q ss_pred HHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccccchHHHHH
Q 022191 52 IPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVV 131 (301)
Q Consensus 52 ~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~ 131 (301)
++.++.+.++..+.|.++.+++++++|+++.++|+++.++++++.+|+.++..+++++....|+.+.+.+|.++|+.|.+
T Consensus 87 lpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i 166 (316)
T KOG1441|consen 87 LPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFI 166 (316)
T ss_pred HHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHH-HHHHhhcccccc--ccccCcchhHHHHHHHHHHH
Q 022191 132 YQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF-IPWIFLEKPKMD--ALETWHFPPLMLTLNCLCTF 208 (301)
Q Consensus 132 l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 208 (301)
.++++.+..+.++++.++++++++.++++.+++.|+++++...++ |.....|+.... ....|........+..++++
T Consensus 167 ~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f 246 (316)
T KOG1441|consen 167 SAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAF 246 (316)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHH
Confidence 999999999999999999998767789999999999999999999 665555544330 22234444444555559999
Q ss_pred HHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchhhh
Q 022191 209 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEA 277 (301)
Q Consensus 209 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~~~ 277 (301)
+.|...+.+++++||+|.++.+.+|.+..++.|+++|+|+ .|+.+..|+++.+.|+.+|++.|.++++
T Consensus 247 ~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~p-vt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 247 LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNP-VTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCC-CchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999 9999999999999999999988876543
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.96 E-value=1e-26 Score=209.51 Aligned_cols=229 Identities=16% Similarity=0.166 Sum_probs=177.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHH------cccccchhHHHHHHHHhhhhe
Q 022191 43 TLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAA------GLEVMSCRMLLIMSVISFGVV 116 (301)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~------~~e~~s~~~~~~~~~~~~Gv~ 116 (301)
+++++. .+...+++....+.+.+.+++|++++.++++.+++|++++++++++ +|||+++.++++++++++|+.
T Consensus 74 ~~~~~~-~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ 152 (358)
T PLN00411 74 SVSILS-KIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGAL 152 (358)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHH
Confidence 456543 4555666655667789999999999999999999999999999999 699999999999999999999
Q ss_pred eeeec-cc-----------------------cch-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHH
Q 022191 117 VASYG-EI-----------------------NIN-WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCS 171 (301)
Q Consensus 117 l~~~~-~~-----------------------~~~-~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 171 (301)
+.... +. ..+ ..|+.+.++|+++||+|++.+|+..++.+ +.....+|+..++
T Consensus 153 ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~---~~~~~t~~~~~~~ 229 (358)
T PLN00411 153 VVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP---AAFTVSFLYTVCV 229 (358)
T ss_pred HHHHccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cHhHHHHHHHHHH
Confidence 75431 10 112 45999999999999999999999887542 3446667777777
Q ss_pred HHHHHHHHHhhccccc-cccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCccc
Q 022191 172 ALCLFIPWIFLEKPKM-DALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKL 250 (301)
Q Consensus 172 ~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~ 250 (301)
.+...++....|..+. .+...+......+++.++...+.+..+++++++.+|.+++++.+++|++++++|++++||+ +
T Consensus 230 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~-l 308 (358)
T PLN00411 230 SIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS-L 308 (358)
T ss_pred HHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCC-C
Confidence 7666666665543221 1111222222234444455555677788999999999999999999999999999999999 9
Q ss_pred chhhhHHHHHHHHHHHHhhhhhchhh
Q 022191 251 TIINLFGYGIAIAGVAAYNNHKLKKE 276 (301)
Q Consensus 251 t~~~iiG~~lil~g~~~~~~~~~~~~ 276 (301)
++.+++|+++++.|+.+.++.++|+.
T Consensus 309 t~~~~iG~~LIl~Gv~l~~~~~~~~~ 334 (358)
T PLN00411 309 YLGCLIGGILITLGFYAVMWGKANEE 334 (358)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999886655443
No 5
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=1.2e-27 Score=201.77 Aligned_cols=266 Identities=25% Similarity=0.411 Sum_probs=238.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHhhhcccc----------------------------------ccCCCCHHHHHH
Q 022191 4 RERRMFREQVLTYAYILLYIALSSGQIFFNKVMK----------------------------------VEDGMTLEIYTT 49 (301)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~----------------------------------~~~~~~~~~~~~ 49 (301)
++++.+-+.+.+.+.++.||.+|+++.+++|+.+ ++...+|++.++
T Consensus 6 ~~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr 85 (349)
T KOG1443|consen 6 LDNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLR 85 (349)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHH
Confidence 5667778888888899999999999999988431 133568999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccccchHHH
Q 022191 50 SVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIG 129 (301)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G 129 (301)
++.|.+++.++..++.|+++.|++.+.+++.+++.++|+.+++.++.-||++|.-.+.+.++.+|+++.+.++.+++..|
T Consensus 86 ~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~G 165 (349)
T KOG1443|consen 86 RLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEG 165 (349)
T ss_pred HhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCHHHHHHHHhHHHHHHHHHHHHhhccccccc-cc------cCc--chhHH
Q 022191 130 VVYQMGGVVGEALRLIFMEILVKRKG-LKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA-LE------TWH--FPPLM 199 (301)
Q Consensus 130 ~~l~l~a~~~~a~~~v~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~------~~~--~~~~~ 199 (301)
..++..|+++.++.+.+.|.++++.+ .+-+|...+++.++...+.++|....+|++.... .. ... .....
T Consensus 166 f~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~ 245 (349)
T KOG1443|consen 166 FFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGL 245 (349)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHH
Confidence 99999999999999999999999876 4558999999999999999999999999876531 11 111 12245
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 200 LTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
+..+|..++....+.+..+.+++..+.++++..+.+.+.+++..+.+|+ ++..+++|..+++.|+..+..
T Consensus 246 i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~-ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 246 ISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQ-LSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcc-hhhhHHHHHHHHHHHHHHhcc
Confidence 8888999999999999999999999999999999999999999999999 999999999999999999943
No 6
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.94 E-value=4.3e-25 Score=195.28 Aligned_cols=227 Identities=19% Similarity=0.233 Sum_probs=189.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc
Q 022191 43 TLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE 122 (301)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~ 122 (301)
.++++ ++.+..+++...++.+.+.|++|++.+.++++.++..+++++++++++|+|+++.+++|++++++|+++....|
T Consensus 75 ~~~~~-w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 75 LKRPW-WKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred cchhH-HHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 34554 45666789999999999999999999999999999999999999999999999999999999999999876654
Q ss_pred c---------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccC
Q 022191 123 I---------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETW 193 (301)
Q Consensus 123 ~---------~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 193 (301)
. +....|++++++|+.+||++++++|+..++ .+..+.+.+.++++.++..+.....|....... .|
T Consensus 154 ~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~----~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~-~w 228 (334)
T PF06027_consen 154 VLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKK----APRVEFLGMLGLFGFIISGIQLAILERSGIESI-HW 228 (334)
T ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhccc----CCHHHHHHHHHHHHHHHHHHHHHheehhhhhcc-CC
Confidence 1 234789999999999999999999999874 478899999999999998888877787665433 33
Q ss_pred cchh-HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 194 HFPP-LMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 194 ~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
.... ...+..++..+..+...-..++..+|+...+-.....+.++++++++||++ +++..++|.++++.|..+|+..+
T Consensus 229 ~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~-~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 229 TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYK-FSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCcc-ccHHHHHHHHHHHHHhheEEccC
Confidence 3332 334444555555555667789999999999888888999999999999999 99999999999999999999766
Q ss_pred chhh
Q 022191 273 LKKE 276 (301)
Q Consensus 273 ~~~~ 276 (301)
++.+
T Consensus 308 ~~~~ 311 (334)
T PF06027_consen 308 SPEE 311 (334)
T ss_pred Cccc
Confidence 5443
No 7
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.93 E-value=1.7e-23 Score=185.11 Aligned_cols=223 Identities=15% Similarity=0.069 Sum_probs=169.0
Q ss_pred CCHHHHHHHHHHHHHH-HHHHHHHhhhhh-hcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeee
Q 022191 42 MTLEIYTTSVIPIGAM-FAMTLWLGNTAY-LYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 119 (301)
Q Consensus 42 ~~~~~~~~~~~~~~~~-~~~~~~~~~~al-~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~ 119 (301)
.+++++.. ....+.+ ...++.+.+++. ++++++.++++.++.|+++++++.+ +|||++++++++++++++|+.+..
T Consensus 63 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~ 140 (292)
T PRK11272 63 PTLRQWLN-AALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN 140 (292)
T ss_pred CcHHHHHH-HHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence 34555443 4444444 456778888998 9999999999999999999999986 699999999999999999998875
Q ss_pred ec-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhH
Q 022191 120 YG-EININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPL 198 (301)
Q Consensus 120 ~~-~~~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 198 (301)
.+ +.+.+..|++++++++++||.+.+..|+..++ ++.....++..++...+.+.....+.+.. ...+......
T Consensus 141 ~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 214 (292)
T PRK11272 141 SGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP-----VGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLA 214 (292)
T ss_pred cCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC-----cchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHH
Confidence 43 33445679999999999999999999886431 33455667777777766666544332211 1111111122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 199 MLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
++..+.+.+...+..+++++++.++.+++.+.+++|+.+++++++++||+ +++.+++|+++++.|+.+.+..++
T Consensus 215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~-~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGET-LSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-CcHHHHHHHHHHHHHHHHHHHHHh
Confidence 23333333445566788899999999999999999999999999999999 999999999999999998875443
No 8
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.93 E-value=1.7e-23 Score=185.49 Aligned_cols=213 Identities=12% Similarity=0.059 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccccchHHHH
Q 022191 51 VIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGV 130 (301)
Q Consensus 51 ~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~ 130 (301)
.+..+++.+.++.++++|+++++++.++++.++.|+++++++++++|||++++++.+++++++|+++....+.+. .
T Consensus 76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~ 151 (296)
T PRK15430 76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----P 151 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----c
Confidence 345567778889999999999999999999999999999999999999999999999999999999875433222 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHH
Q 022191 131 VYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFAL 210 (301)
Q Consensus 131 ~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (301)
.+.++++++||+|.+..|+..+++ ..+......|...++.+...+. .+.+..............+...++.+...
T Consensus 152 ~~~l~aa~~~a~~~i~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~t~i~ 226 (296)
T PRK15430 152 IIALGLAFSFAFYGLVRKKIAVEA--QTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQNPMSLNLLLIAAGIVTTVP 226 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCC--chhHHHHHHHHHHHHHHHHHHH---ccCCcccccCCcHHHHHHHHHHHHHHHHH
Confidence 468889999999999988864311 1233444445554444332211 11111111111111123344445556666
Q ss_pred HHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 211 NLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 211 ~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
+.++.+++++.+|.+++.+.+++|+++.++|++++||+ +++.+++|+++++.|+.+......
T Consensus 227 ~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~-~~~~~~~G~~lI~~~~~v~~~~~~ 288 (296)
T PRK15430 227 LLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEK-PGADKMVTFAFIWVALAIFVMDAI 288 (296)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999 999999999999888877765543
No 9
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.93 E-value=1.3e-23 Score=186.83 Aligned_cols=225 Identities=24% Similarity=0.323 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecccc---
Q 022191 48 TTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEIN--- 124 (301)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~--- 124 (301)
.+..++.++++.++..+.|.|++|+|.+..++++++.|+++++++.+++|||.++++++++++..+|+++....|.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~ 143 (303)
T PF08449_consen 64 LKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS 143 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence 45678889999999999999999999999999999999999999999999999999999999999999997764421
Q ss_pred -c------hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhc---ccccccc-ccC
Q 022191 125 -I------NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE---KPKMDAL-ETW 193 (301)
Q Consensus 125 -~------~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~-~~~ 193 (301)
. +..|+++.+++.++.|+..+++++..+++ +.++.+.++|...++.+..++.....+ ..+.... ...
T Consensus 144 ~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~--~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~ 221 (303)
T PF08449_consen 144 SSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKY--GKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAH 221 (303)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHh
Confidence 1 12399999999999999999999999876 568999999999999988877776522 1111111 111
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 194 HFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
+..+..+...++.+...+...+..+++.+|++.++...++.+.++++++++||++ +++.+++|+++++.|..+|++.++
T Consensus 222 p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~-~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 222 PSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHP-LSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCc-CChHHHHHHHHhHHHHHHHHHhhc
Confidence 2233456667777777777888899999999999999999999999999999999 999999999999999999998876
Q ss_pred hh
Q 022191 274 KK 275 (301)
Q Consensus 274 ~~ 275 (301)
|+
T Consensus 301 k~ 302 (303)
T PF08449_consen 301 KK 302 (303)
T ss_pred cC
Confidence 54
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.93 E-value=2.4e-23 Score=181.08 Aligned_cols=218 Identities=20% Similarity=0.140 Sum_probs=173.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc
Q 022191 43 TLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE 122 (301)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~ 122 (301)
+++++.+....++++...++.++++|++|++++.++++.++.|+++++++.+++|||++++++.+++++++|+.+...++
T Consensus 42 ~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~ 121 (260)
T TIGR00950 42 PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG 121 (260)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC
Confidence 45555555666677788899999999999999999999999999999999999999999999999999999999875443
Q ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHH
Q 022191 123 -ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLT 201 (301)
Q Consensus 123 -~~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (301)
.+.+..|+.++++++++|+.+.++.|+..++. +.++.....+...++.+.+.+.....+..... +.......+.
T Consensus 122 ~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~ 196 (260)
T TIGR00950 122 NLSINPAGLLLGLGSGISFALGTVLYKRLVKKE--GPELLQFTGWVLLLGALLLLPFAWFLGPNPQA---LSLQWGALLY 196 (260)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---chHHHHHHHH
Confidence 44556799999999999999999999987632 22344555566777777776666543322211 1222222333
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHH
Q 022191 202 LNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVA 266 (301)
Q Consensus 202 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~ 266 (301)
.+.+.....+..+++++++.++.+++.+.+++|+++.+++++++||+ +++.+++|.++++.|++
T Consensus 197 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~-~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 197 LGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGET-LSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHhcC
Confidence 44444455677788999999999999999999999999999999999 99999999999998863
No 11
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.92 E-value=5.3e-23 Score=182.22 Aligned_cols=213 Identities=14% Similarity=0.056 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhc----chhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccc-
Q 022191 49 TSVIPIGAMFAMTLWLGNTAYLY----ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI- 123 (301)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~al~~----~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~- 123 (301)
+..+..++.+.+++.+.+.+++| .+++.+.++.+++|+++++++++++|||++++++.++.++++|+++...++.
T Consensus 62 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~ 141 (295)
T PRK11689 62 RYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNG 141 (295)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCcc
Confidence 34555566666777788888765 5778889999999999999999999999999999999999999998765432
Q ss_pred ----------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccC
Q 022191 124 ----------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETW 193 (301)
Q Consensus 124 ----------~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 193 (301)
..+..|+++.++|+++||.|+++.|+..++ .++..... ..+...+.+.... +.... ...++
T Consensus 142 ~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~----~~~~~~~~---~~~~~~l~~~~~~-~~~~~-~~~~~ 212 (295)
T PRK11689 142 LSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG----KNGITLFF---ILTALALWIKYFL-SPQPA-MVFSL 212 (295)
T ss_pred chhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCC----CCchhHHH---HHHHHHHHHHHHH-hcCcc-ccCCH
Confidence 123469999999999999999999998542 35544322 2222333333332 22211 11122
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 194 HFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
.. +..+.+.++.+...+..+++++++.++.+++.+.+++|+++++++++++||+ +++.+++|+++++.|+.+....+
T Consensus 213 ~~-~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~-~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 213 PA-IIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTP-LSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHhHHHHhhhH
Confidence 22 2223344456666688899999999999999999999999999999999999 99999999999999998876544
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.92 E-value=8.2e-23 Score=181.38 Aligned_cols=221 Identities=13% Similarity=0.112 Sum_probs=162.4
Q ss_pred HHHHHHH-HHHHHHHhhhhhhc-chhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc---ccc
Q 022191 51 VIPIGAM-FAMTLWLGNTAYLY-ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE---INI 125 (301)
Q Consensus 51 ~~~~~~~-~~~~~~~~~~al~~-~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~---~~~ 125 (301)
.+..+++ ......+++.+++| .+++.+.++.+++|+++.+++++++|||++++++++++++++|+.+...++ .+.
T Consensus 61 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~ 140 (299)
T PRK11453 61 LLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHV 140 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcch
Confidence 3344443 33455577888888 689999999999999999999999999999999999999999999876432 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccc--c--cccCcchhHHHH
Q 022191 126 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMD--A--LETWHFPPLMLT 201 (301)
Q Consensus 126 ~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~--~~~~~~~~~~~~ 201 (301)
+..|++++++++++||.|.+++|+..++.+ ..+......+....+.+.........|++... . ..++.....++.
T Consensus 141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (299)
T PRK11453 141 AMLGFMLTLAAAFSWACGNIFNKKIMSHST-RPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMY 219 (299)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccC-ccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHH
Confidence 457999999999999999999999865432 23344445566555554443333333432210 0 111112222233
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 202 LNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 202 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
.+.+.+...+..+.+++++.++.+++...+++|+.+.+++++++||+ +++.+++|+++++.|+.+..+.++
T Consensus 220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~-~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDER-LTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHHHhcchh
Confidence 33334444566688889999999999999999999999999999999 999999999999999988765443
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.91 E-value=6.5e-22 Score=175.09 Aligned_cols=218 Identities=15% Similarity=0.113 Sum_probs=162.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeee
Q 022191 41 GMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 120 (301)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~ 120 (301)
+.+++++ +..+..+++.+..+.+++++++|+|++.++++.+++|+++++++ +|++++.+ ++.++++|+.+...
T Consensus 65 ~~~~~~~-~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~~--~~~i~~~Gv~li~~ 137 (293)
T PRK10532 65 RFAKEQR-LPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDFV--WVVLAVLGLWFLLP 137 (293)
T ss_pred cCCHHHH-HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHHH--HHHHHHHHHheeee
Confidence 4456664 44667777788888899999999999999999999999999887 36665544 45667889887653
Q ss_pred c--c-ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchh
Q 022191 121 G--E-ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPP 197 (301)
Q Consensus 121 ~--~-~~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 197 (301)
. + .+.+..|+++.++++++||.|.+..|+..++ .++... .+...++.+.+.+.....+. . ...++....
T Consensus 138 ~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~----~~~~~~-~~~~~~~~~~l~~~~~~~~~-~--~~~~~~~~~ 209 (293)
T PRK10532 138 LGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE----HGPATV-AIGSLIAALIFVPIGALQAG-E--ALWHWSILP 209 (293)
T ss_pred cCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc----CCchHH-HHHHHHHHHHHHHHHHHccC-c--ccCCHHHHH
Confidence 2 2 2335679999999999999999999998653 355554 45666666666665544322 1 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhch
Q 022191 198 LMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~ 274 (301)
..+..+.+.+...+..+++++++.++.+++++.+++|+++.++|++++||+ +++.+++|++++++|++.++..+++
T Consensus 210 ~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~-~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 210 LGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGET-LTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 223333344445566788999999999999999999999999999999999 9999999999999999998765533
No 14
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=6.6e-23 Score=175.55 Aligned_cols=268 Identities=18% Similarity=0.273 Sum_probs=227.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHhhhccc---------------------------c-----ccCCCCHHHHHHHHHHHH
Q 022191 8 MFREQVLTYAYILLYIALSSGQIFFNKVM---------------------------K-----VEDGMTLEIYTTSVIPIG 55 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~---------------------------~-----~~~~~~~~~~~~~~~~~~ 55 (301)
..+.........+.|+.+|+.+.+.||++ | +.++++++. .|.++|.+
T Consensus 6 ~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~-~kk~~P~~ 84 (314)
T KOG1444|consen 6 GSKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRT-AKKWFPVS 84 (314)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHH-HHHHccHH
Confidence 44555666777888999999999999932 1 356777887 57899999
Q ss_pred HHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccccchHHHHHHHHH
Q 022191 56 AMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMG 135 (301)
Q Consensus 56 ~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~l~l~ 135 (301)
+++.++......+++|+++++++++++.+|+++++.+..++|.|+++..|.++..+.+|......+|.+++..|+.+.+.
T Consensus 85 ~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~ 164 (314)
T KOG1444|consen 85 LLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALA 164 (314)
T ss_pred HHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccc-cc-ccccCcc--hhHHHHHHHHHHHHHH
Q 022191 136 GVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPK-MD-ALETWHF--PPLMLTLNCLCTFALN 211 (301)
Q Consensus 136 a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~~--~~~~~~~~~~~~~~~~ 211 (301)
..++.+.+.++.|+-.+.. +.+.+.+++|..+++.+.+....++.+..+ .. ..+.|.. .+..+.++|++++..+
T Consensus 165 n~~~~a~~~v~~kk~vd~~--~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~is 242 (314)
T KOG1444|consen 165 NCLTTAAFVVYVKKSVDSA--NLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGIS 242 (314)
T ss_pred HHHHHHHHHHHHHHhhccc--cccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHH
Confidence 9999999999999988754 568899999999999998877776554322 11 1112322 2345889999999999
Q ss_pred HHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchhhhhh
Q 022191 212 LSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASR 279 (301)
Q Consensus 212 ~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~~~~~ 279 (301)
++.+++.+.+|+++.++++......+.+.+.++++++ .++..++|..+.+.|..+|++.+.++++.+
T Consensus 243 y~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~-~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 243 YTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKP-FTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred HHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCce-echhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 9999999999999999999666667777777777777 999999999999999999998886655433
No 15
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.89 E-value=2.1e-21 Score=170.91 Aligned_cols=220 Identities=12% Similarity=0.044 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc-c
Q 022191 45 EIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE-I 123 (301)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~-~ 123 (301)
++.+...+..++....++.+.+.|+++.+++.++.+.+++|+++++++++++|||+++++++|+.+++.|+.+...++ .
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~ 139 (281)
T TIGR03340 60 ATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA 139 (281)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc
Confidence 333455667777788899999999999999999999999999999999999999999999999999999999765433 2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHH
Q 022191 124 NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLN 203 (301)
Q Consensus 124 ~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+.+..|+.+.++++++|+.|.+..|+..++.+...+......+........+.+.....+.... .. .....+..+..+
T Consensus 140 ~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 217 (281)
T TIGR03340 140 QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM-FP-YARQILPSATLG 217 (281)
T ss_pred ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccch-hh-hHHHHHHHHHHH
Confidence 2345688899999999999999887753321111122222222222221121122111111111 01 111123445556
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHH
Q 022191 204 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAA 267 (301)
Q Consensus 204 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~ 267 (301)
++.+...+..+++++++.++.+.+.+.+++|+++.++|++++||+ +++.+++|+++++.|+.+
T Consensus 218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~-~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNER-WYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHhHHh
Confidence 666666777889999999999999999999999999999999999 999999999999999875
No 16
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.84 E-value=1.5e-19 Score=156.98 Aligned_cols=226 Identities=15% Similarity=0.155 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccc--
Q 022191 46 IYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI-- 123 (301)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~-- 123 (301)
+..+..+..+.++...+..+|.|+.|++++..+++.+++-+|+.+++.++..||+++.|.+++.+.++|+++.+.++.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 555666777888889999999999999999999999999999999999999999999999999999999999887632
Q ss_pred ------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccc---ccccccCc
Q 022191 124 ------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPK---MDALETWH 194 (301)
Q Consensus 124 ------~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~ 194 (301)
+....|.++++++++.||.|.++.||-..+++.+++-..+..|.+++..+.+.|+.++.+.-. ..-+...+
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q 316 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQ 316 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCce
Confidence 234789999999999999999999999888766899999999999999999998887654321 11111122
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 195 FPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
. ..+++.+.+..++..+.|.++.-.++|+++.+...+..+.+++.+.++-|.+ +++.+++|...+++|....++...
T Consensus 317 ~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~-~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 317 F-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKH-PSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred e-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHhheecccc
Confidence 2 2334555666777788899999999999999999999999999999999999 999999999999999999987654
No 17
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.84 E-value=4.7e-18 Score=149.62 Aligned_cols=213 Identities=18% Similarity=0.172 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHH-HHcccccchhHHHHHHHHhhhheeeeeccccc-
Q 022191 48 TTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGV-AAGLEVMSCRMLLIMSVISFGVVVASYGEINI- 125 (301)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~-~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~- 125 (301)
.+..+...++......+++.++++++++.++++.++.|+++.+++. +++|||++++++.++.+.+.|+.+...++...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~ 149 (292)
T COG0697 70 LLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG 149 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch
Confidence 3457777777888999999999999999999999999999999997 77799999999999999999999998766543
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHH-HHhHHHHHHHHHHHHhhccccccccccCcchhHHHHH
Q 022191 126 --NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMY-YVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTL 202 (301)
Q Consensus 126 --~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (301)
+..|+.+++.+++++|++.+..|+.. + .++..... +... ....+.......+.+ ....... +.....
T Consensus 150 ~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 219 (292)
T COG0697 150 ILSLLGLLLALAAALLWALYTALVKRLS-R----LGPVTLALLLQLL-LALLLLLLFFLSGFG---APILSRA-WLLLLY 219 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc-C----CChHHHHHHHHHH-HHHHHHHHHHhcccc---ccCCHHH-HHHHHH
Confidence 25799999999999999999999876 2 34555444 3333 111111111111111 1111111 222333
Q ss_pred HHHHHH-HHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhh
Q 022191 203 NCLCTF-ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 271 (301)
Q Consensus 203 ~~~~~~-~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~ 271 (301)
.++... ..+..+++.+++.++...+...+++|+.+.+++++++||+ ++..+++|.++++.|+.+.+..
T Consensus 220 ~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~-~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 220 LGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEP-LSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHhcc
Confidence 333333 4577788899999999999999999999999999999999 9999999999999999998765
No 18
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.80 E-value=1.4e-17 Score=142.52 Aligned_cols=210 Identities=15% Similarity=0.155 Sum_probs=166.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc
Q 022191 43 TLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE 122 (301)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~ 122 (301)
++|+.+ +...-+++|..++.+.+.++++++++.++++.++..+++++++++++|+|++++||.++.+.++|+.+...++
T Consensus 13 ~~~~~~-~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 13 SPKDTL-KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 466654 4667788899999999999999999999999999999999999999999999999999999999999865432
Q ss_pred c-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccc
Q 022191 123 I-----------------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKP 185 (301)
Q Consensus 123 ~-----------------~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 185 (301)
. +....|++..++++++.|+..++.||++|+++ .+.+....+.+.++.++.++.....+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~ 169 (244)
T PF04142_consen 92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGS 169 (244)
T ss_pred ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 1 11358999999999999999999999999764 5666666667777777776665554443
Q ss_pred ccccc---ccCcchhHH-HHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHH
Q 022191 186 KMDAL---ETWHFPPLM-LTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGI 260 (301)
Q Consensus 186 ~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~l 260 (301)
..... ..+....+. +...++. .+....++|+.+...-+.......+.+.+.++++||.+ ++...++|..+
T Consensus 170 ~~~~~g~f~G~~~~~~~~i~~~a~g----Gllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~-~s~~f~lg~~~ 243 (244)
T PF04142_consen 170 AISESGFFHGYSWWVWIVIFLQAIG----GLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFP-PSLSFLLGAAL 243 (244)
T ss_pred ccccCCchhhcchHHHHHHHHHHHh----hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCC-CchHHhhheec
Confidence 32222 223322222 3333333 33355668999999999999999999999999999999 99999999865
No 19
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.79 E-value=1.8e-18 Score=140.26 Aligned_cols=259 Identities=17% Similarity=0.218 Sum_probs=216.7
Q ss_pred HHHHHHHHHHhHHHHhhhcccc-----------------------------ccCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 022191 16 YAYILLYIALSSGQIFFNKVMK-----------------------------VEDGMTLEIYTTSVIPIGAMFAMTLWLGN 66 (301)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~k~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (301)
...++.|+..++.+...||++- +--+++.++ .+.++|.+++.........
T Consensus 8 ~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~-aK~WfpiSfLLv~MIyt~S 86 (309)
T COG5070 8 LTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTK-AKKWFPISFLLVVMIYTSS 86 (309)
T ss_pred chHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhh-hhhhcCHHHHHHHHHHhcc
Confidence 3467889999999999999541 111233344 4678999999999999999
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecccc--------chHHHHHHHHHHHH
Q 022191 67 TAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEIN--------INWIGVVYQMGGVV 138 (301)
Q Consensus 67 ~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~--------~~~~G~~l~l~a~~ 138 (301)
-+++|.+++.+++.++++.+.++..+.++++.|.+-.+..+.++++..-....++|.+ .| .|+++....++
T Consensus 87 KsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncl 165 (309)
T COG5070 87 KSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCL 165 (309)
T ss_pred cceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhH
Confidence 9999999999999999999999999999999999999999999999988888887752 23 49999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccc--CcchhHHHHHHHHHHHHHHHHHHH
Q 022191 139 GEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALET--WHFPPLMLTLNCLCTFALNLSVFL 216 (301)
Q Consensus 139 ~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 216 (301)
..|.+-...|+..+-. +....+.++|..+.+.+++....+..|.++.....+ ..+.+.....+|++++...++..|
T Consensus 166 ssaafVL~mrkri~lt--Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saW 243 (309)
T COG5070 166 SSAAFVLIMRKRIKLT--NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAW 243 (309)
T ss_pred hHHHHHHHHHHhhccc--ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccce
Confidence 9999998888877644 457788899999999999999998888765542221 123345688899999999999999
Q ss_pred HHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchhhhhh
Q 022191 217 VISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASR 279 (301)
Q Consensus 217 ~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~~~~~ 279 (301)
+++.+++++.++++.++.....+-|.++|+|+ .+...+..+.+=..+..+|...+.++++++
T Consensus 244 cvrVtSSTtySMvGALNKlp~alaGlvffdap-~nf~si~sillGflsg~iYavaks~k~q~q 305 (309)
T COG5070 244 CVRVTSSTTYSMVGALNKLPIALAGLVFFDAP-VNFLSIFSILLGFLSGAIYAVAKSKKQQNQ 305 (309)
T ss_pred eEeehhhhHHHHHHHhhhChHHHhhhhhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999 999999999988888889988776554433
No 20
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.79 E-value=1.2e-17 Score=144.95 Aligned_cols=186 Identities=12% Similarity=0.010 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccccchH
Q 022191 48 TTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININW 127 (301)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~ 127 (301)
...+...+++...++.++++|+++++++.++++.+++|+++++++++++|||++++++++++++++|+++...++.+.+
T Consensus 70 ~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~- 148 (256)
T TIGR00688 70 ILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP- 148 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch-
Confidence 3346677777888999999999999999999999999999999999999999999999999999999997654332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHH
Q 022191 128 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT 207 (301)
Q Consensus 128 ~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (301)
.++++++++||.|.+..|+..++ +..+...+. ....+...+.....+.+.. ...+....+..++..++.+
T Consensus 149 ---~~~l~aa~~~a~~~i~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~g~~t 218 (256)
T TIGR00688 149 ---WEALVLAFSFTAYGLIRKALKNT-----DLAGFCLET-LSLMPVAIYYLLQTDFATV-QQTNPFPIWLLLVLAGLIT 218 (256)
T ss_pred ---HHHHHHHHHHHHHHHHHhhcCCC-----CcchHHHHH-HHHHHHHHHHHHHhccCcc-cccCchhHHHHHHHHHHHH
Confidence 35788999999999998886431 222222111 1111111111111111111 1111111233333444556
Q ss_pred HHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhh
Q 022191 208 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALL 244 (301)
Q Consensus 208 ~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~ 244 (301)
...+..+..++++.++.+.+.+.+++|+++.+++.++
T Consensus 219 ~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 219 GTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 6678889999999999999999999999999999764
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=2.3e-18 Score=140.71 Aligned_cols=234 Identities=18% Similarity=0.196 Sum_probs=184.5
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhe
Q 022191 37 KVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 116 (301)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~ 116 (301)
++..+.++.. .+.....++-|.+.+...|.|++|+|.++..+-+++.|+.+++++.++.|++.+|+++++++.++.|++
T Consensus 75 r~~~~~D~t~-~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GVa 153 (337)
T KOG1580|consen 75 RKKTEIDNTP-TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVA 153 (337)
T ss_pred cccccccCCc-chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHH
Confidence 4434444333 345778888899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccc-------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHh-hcccccc
Q 022191 117 VASYGEI-------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIF-LEKPKMD 188 (301)
Q Consensus 117 l~~~~~~-------~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~ 188 (301)
+...++. +....|-++.+++-...+.....|.++-. .+..+...++++..+++.+.+.....+ .|.+...
T Consensus 154 lFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira--~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~ 231 (337)
T KOG1580|consen 154 LFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRA--SYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFF 231 (337)
T ss_pred HhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHH--hhccCchhhHHHHHHHHHHHhhhhheehhhHHHHH
Confidence 9877542 11246899999999999999999988744 335678889999999999877655433 2333222
Q ss_pred cc-ccCcchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHH
Q 022191 189 AL-ETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAA 267 (301)
Q Consensus 189 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~ 267 (301)
.. ...+..++-+..-++.+.+.+.+.+..+...+|.+-|+....+..++++.++++|+++ ++..||+|.++++.+...
T Consensus 232 yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~np-ls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 232 YFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNP-LSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHHhhh
Confidence 11 1122223334445566666677778889999999999999999999999999999999 999999999999999877
Q ss_pred hhhhhch
Q 022191 268 YNNHKLK 274 (301)
Q Consensus 268 ~~~~~~~ 274 (301)
-....++
T Consensus 311 D~~~GK~ 317 (337)
T KOG1580|consen 311 DVVDGKK 317 (337)
T ss_pred HhhcCCc
Confidence 6544443
No 22
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.6e-17 Score=138.74 Aligned_cols=236 Identities=19% Similarity=0.182 Sum_probs=190.5
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhh
Q 022191 34 KVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISF 113 (301)
Q Consensus 34 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~ 113 (301)
|+++++ .+.++.++.....++.......+.+.|++|++-+...+.+++.-+.+++++.++.|+|.+..+++...++..
T Consensus 71 ~~~k~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~ 148 (327)
T KOG1581|consen 71 KWWKKE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISL 148 (327)
T ss_pred hccccc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHh
Confidence 344433 333444667888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeeeccc---------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcc
Q 022191 114 GVVVASYGEI---------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEK 184 (301)
Q Consensus 114 Gv~l~~~~~~---------~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 184 (301)
|+.+....+. +..+.|+.+....-+..++.+..|.++.++ .++++++++++..+++++.-.......+.
T Consensus 149 GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~--~k~s~~~mM~~vNLf~~i~~~~~li~qg~ 226 (327)
T KOG1581|consen 149 GVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK--YKVSSLHMMFGVNLFSAILNGTYLILQGH 226 (327)
T ss_pred heeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc--CCccHhHHHHHHHHHHHHHHHHhhhcCCC
Confidence 9998665321 234789999999999999999999999984 47899999999999999877655332211
Q ss_pred ccc-ccc-ccCcchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHH
Q 022191 185 PKM-DAL-ETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAI 262 (301)
Q Consensus 185 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil 262 (301)
... ... ...+..++-+...+.++...+.+.++.+++-++.+.......+..++++++.+.||++ +++.|++|..+++
T Consensus 227 ~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~-~s~~q~~g~~iVF 305 (327)
T KOG1581|consen 227 LLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHP-LSSEQWLGVLIVF 305 (327)
T ss_pred CchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCc-cchhhccCeeeeh
Confidence 111 010 1112222334445566666677788889999999999999999999999999999999 9999999999999
Q ss_pred HHHHHhhhhhch
Q 022191 263 AGVAAYNNHKLK 274 (301)
Q Consensus 263 ~g~~~~~~~~~~ 274 (301)
.|+.+-.+.+++
T Consensus 306 g~i~l~~~~k~~ 317 (327)
T KOG1581|consen 306 GGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHHh
Confidence 999887766655
No 23
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=3.8e-20 Score=154.21 Aligned_cols=228 Identities=18% Similarity=0.195 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc---c
Q 022191 47 YTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE---I 123 (301)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~---~ 123 (301)
..+.+.|.++.+.+...+.|.+++|++++++.+=++++.+|+.++.++++|||-+..-..++++++.|..+-+..+ .
T Consensus 101 t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~ 180 (347)
T KOG1442|consen 101 TARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTG 180 (347)
T ss_pred HHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccC
Confidence 3567999999999999999999999999999999999999999999999999999999999999999999877665 4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhc-ccccccc-ccCcc-hhHHH
Q 022191 124 NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE-KPKMDAL-ETWHF-PPLML 200 (301)
Q Consensus 124 ~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~-~~~~~ 200 (301)
..++.|.+++..|+++-|+..++.|+..... .-.-+.+.+|+.+.+.+..+|...+.. ....... ..+.. .+.+.
T Consensus 181 ~ls~~GvifGVlaSl~vAlnaiytkk~l~~v--~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~m 258 (347)
T KOG1442|consen 181 TLSWIGVIFGVLASLAVALNAIYTKKVLPPV--GDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILM 258 (347)
T ss_pred ccchhhhHHHHHHHHHHHHHHHhhheecccc--cCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHH
Confidence 4568999999999999999999999765432 235688889999999988877765532 2222221 22222 23558
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchhhh
Q 022191 201 TLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEA 277 (301)
Q Consensus 201 ~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~~~ 277 (301)
.++|+.++.+++...+-+|.+||.|..+-+..+.....++++.+++|. .+..-|-|-.++++|...|++.|..+.+
T Consensus 259 tLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~-ks~lwwtsn~~vLvgs~~YT~vk~~em~ 334 (347)
T KOG1442|consen 259 TLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSET-KSGLWWTSNIVVLVGSLAYTLVKEHEMR 334 (347)
T ss_pred HHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHH-hhhheeeeeEEEEehhHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999 9999999999999999999987754443
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.76 E-value=3.3e-16 Score=136.46 Aligned_cols=224 Identities=14% Similarity=0.106 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc-
Q 022191 44 LEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE- 122 (301)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~- 122 (301)
|++.+ ++..-+++|+.++.+.+.++.+.+++++++..++..+.++++..++++||++++||.++++.+.|+.+...+.
T Consensus 89 ~~~~l-k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 89 PRETL-KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred hHHHH-HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence 44544 4677788999998999999999999999999999999999999999999999999999999999999876211
Q ss_pred ----------ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccc--
Q 022191 123 ----------ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL-- 190 (301)
Q Consensus 123 ----------~~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 190 (301)
.+..+.|....+.++++.++..++-+|++|+.+ .+.+......+.++.+..+...+..+.....+.
T Consensus 168 ~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~--~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gf 245 (345)
T KOG2234|consen 168 SPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN--VSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGF 245 (345)
T ss_pred CCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHHhhccccccccCCc
Confidence 123478999999999999999999999998764 455555555566677666555555444333221
Q ss_pred -ccCcchh-HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHh
Q 022191 191 -ETWHFPP-LMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY 268 (301)
Q Consensus 191 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~ 268 (301)
..|.... ..++..++.+.. ...++|+.+...-.....+..+++.+.++.+|+.+ +|....+|..+++.++.+|
T Consensus 246 f~G~s~~vw~vVl~~a~gGLl----vs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~-~t~~F~lG~~lVi~Si~lY 320 (345)
T KOG2234|consen 246 FYGYSSIVWLVVLLNAVGGLL----VSLVMKYADNILKGFSTSVAIILTTVASIALFDFQ-LTLYFLLGALLVILSIFLY 320 (345)
T ss_pred cccccHHHHHHHHHHhccchh----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCC-chHHHHHHHHHHHHHHHHh
Confidence 2233222 334444444433 44557888988888889999999999999999999 9999999999999999999
Q ss_pred hhhhchh
Q 022191 269 NNHKLKK 275 (301)
Q Consensus 269 ~~~~~~~ 275 (301)
+..+.+.
T Consensus 321 ~~~P~~~ 327 (345)
T KOG2234|consen 321 SLYPARD 327 (345)
T ss_pred hcCCccc
Confidence 9655544
No 25
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.76 E-value=2.2e-16 Score=139.36 Aligned_cols=212 Identities=14% Similarity=0.092 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHH-HHHHHHHHHHHHHcccccchhH----HHHHHHHhhhheeee
Q 022191 45 EIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKA-IMPVAVFILGVAAGLEVMSCRM----LLIMSVISFGVVVAS 119 (301)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~-~~pi~~~~~~~~~~~e~~s~~~----~~~~~~~~~Gv~l~~ 119 (301)
+.....-+..+.+++.++.+++.+.++++++.+..+.+ +.++++.+.+.+++|||.++++ .+++++++.|+++..
T Consensus 56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~ 135 (290)
T TIGR00776 56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS 135 (290)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence 33344466667778889999999999999999999998 8999999999999999999999 999999999999876
Q ss_pred ecccc-------ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHH---HHHhHHHHHHHHHHHHhhcccccc
Q 022191 120 YGEIN-------IN-WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVM---YYVSPCSALCLFIPWIFLEKPKMD 188 (301)
Q Consensus 120 ~~~~~-------~~-~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~ 188 (301)
..+.+ .+ ..|++++++|+++|++|.+..|+. +.+|.+.. .+...++.....++. .+..+.
T Consensus 136 ~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~- 206 (290)
T TIGR00776 136 RSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGH--ILAKPL- 206 (290)
T ss_pred eccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc------CCCcceehhHHHHHHHHHHHHHHHHH--hcccch-
Confidence 53211 23 679999999999999999999865 24677663 333333443333322 110100
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHHHHHHH-hcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhh----HHHHHHHH
Q 022191 189 ALETWHFPPLMLTLNCLCTFALNLSVFLVIS-HTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINL----FGYGIAIA 263 (301)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~i----iG~~lil~ 263 (301)
........+..|+.....+..+....+ +.++.+++++.+.+|+.+.+++++++||+ .++.|+ +|.++++.
T Consensus 207 ----~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~-~~~~~~~~~~iG~~lIi~ 281 (290)
T TIGR00776 207 ----KKYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEK-KTKREMIAISVGIILIII 281 (290)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccC-CCcceeehhHHHHHHHHH
Confidence 111122333356666666777778888 99999999999999999999999999999 999999 99999999
Q ss_pred HHHHhhh
Q 022191 264 GVAAYNN 270 (301)
Q Consensus 264 g~~~~~~ 270 (301)
|+.+...
T Consensus 282 ~~~l~~~ 288 (290)
T TIGR00776 282 AANILGI 288 (290)
T ss_pred HHHHHhc
Confidence 9987653
No 26
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.75 E-value=5.9e-16 Score=131.29 Aligned_cols=218 Identities=15% Similarity=0.120 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeeccccchHH
Q 022191 49 TSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWI 128 (301)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~ 128 (301)
......+++.+.++..+.||.....+-.++.=.+.+|++.++++.+++|||+++.|+++++++.+||........+.++.
T Consensus 73 ~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwv 152 (293)
T COG2962 73 LMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWV 152 (293)
T ss_pred HHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHH
Confidence 35677788888999999999999999999999999999999999999999999999999999999999887777777765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHH
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 208 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (301)
... =+++|++|... ||.+ ++++.+-...-...-.+..+......+........+......+++..|..+.
T Consensus 153 al~----la~sf~~Ygl~-RK~~-----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTa 222 (293)
T COG2962 153 ALA----LALSFGLYGLL-RKKL-----KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTA 222 (293)
T ss_pred HHH----HHHHHHHHHHH-HHhc-----CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHH
Confidence 443 35678888765 4433 4677776666655555554444444443321111122233455666677776
Q ss_pred HHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchhhh
Q 022191 209 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEA 277 (301)
Q Consensus 209 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~~~ 277 (301)
.--.....+-++.+-.+.+++.+.+|..-.+++++++||+ ++..+.+..+++..|..+|..+..++.+
T Consensus 223 vpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~-~~~~~~~~F~~IW~aL~l~~~d~l~~~r 290 (293)
T COG2962 223 VPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEP-FDSDQLVTFAFIWLALALFSIDGLYTAR 290 (293)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666677778999999999999999999999999999999 9999999999999999999977654433
No 27
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.72 E-value=1.4e-18 Score=144.57 Aligned_cols=216 Identities=17% Similarity=0.097 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc------
Q 022191 49 TSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE------ 122 (301)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~------ 122 (301)
++++..+++...+....|+|++|++.+++.++..++|.++.++++.++||+.++.+.++..+.+.|+++...+.
T Consensus 98 ~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~ 177 (346)
T KOG4510|consen 98 KWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDT 177 (346)
T ss_pred EEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCC
Confidence 45778888888899999999999999999999999999999999999999999999999999999999977532
Q ss_pred --------ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCc
Q 022191 123 --------ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWH 194 (301)
Q Consensus 123 --------~~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 194 (301)
.+.+..|.+.++.+.+..|.-++..|++-|+ .|..-.+.|..+++.+..++...... ....+..+.
T Consensus 178 t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~----~h~~msvsyf~~i~lV~s~I~~~~ig--~~~lP~cgk 251 (346)
T KOG4510|consen 178 TEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKN----AHAIMSVSYFSLITLVVSLIGCASIG--AVQLPHCGK 251 (346)
T ss_pred ccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcc----ccEEEEehHHHHHHHHHHHHHHhhcc--ceecCcccc
Confidence 1223458888888888888888888888663 45555556666666654444333222 222222222
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 195 FPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
.. ++.+.-|+.++..++.....+++=-|...+++.+...+++.++.+++|||. ++++.++|+++++.+.......|
T Consensus 252 dr-~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~-Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 252 DR-WLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHW-PTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred ce-EEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCC-ChHHHhhceeeeehhHHHHHHHH
Confidence 22 222233567777777778888888888889999999999999999999999 99999999999998887765444
No 28
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.71 E-value=1.3e-15 Score=126.10 Aligned_cols=220 Identities=14% Similarity=0.073 Sum_probs=165.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeee
Q 022191 40 DGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 119 (301)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~ 119 (301)
.+.++++ ++.++..|.+.++.|.++|.+++.+|.+.+..+.++.|+.++.++ .+| .++...+.+.+.|+.+..
T Consensus 64 ~r~~~~~-~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~ 136 (292)
T COG5006 64 RRLSKPQ-RLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLL 136 (292)
T ss_pred hccChhh-hHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhhe
Confidence 3566777 456999999999999999999999999999999999999998775 333 455666677777877654
Q ss_pred ec---cccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcch
Q 022191 120 YG---EININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFP 196 (301)
Q Consensus 120 ~~---~~~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (301)
-. ..+.|+.|..+++.++.||+.|.+..||.-+. .|..+-+...+.++.++.+|.-.-..++....+......
T Consensus 137 p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~----~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~la 212 (292)
T COG5006 137 PLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA----EHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLA 212 (292)
T ss_pred eccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc----CCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHH
Confidence 32 24567899999999999999999999988652 355666777777788777777653333322221111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhch
Q 022191 197 PLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~ 274 (301)
+...++++.+- +.....++++.++.+.+.+..++|.++.+.|++++||+ +|+.|++|++.++.+..-.+...+|
T Consensus 213 LgvavlSSalP---YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~-ls~~qwlaI~~ViaAsaG~~lt~~~ 286 (292)
T COG5006 213 LGVAVLSSALP---YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGET-LTLIQWLAIAAVIAASAGSTLTARK 286 (292)
T ss_pred HHHHHHhcccc---hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhccccccCC
Confidence 12233333333 44466679999999999999999999999999999999 9999999999999988866654433
No 29
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.70 E-value=5.6e-16 Score=123.89 Aligned_cols=141 Identities=33% Similarity=0.517 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc---CCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccc------c---Ccch
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVKRK---GLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALE------T---WHFP 196 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~---~~~~ 196 (301)
|.++++.|+++.|+++++.|+.++++ +.+.++.+++.|.++.+.+.++|.+...|.+...... + ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999999873 3478999999999999999999999888776532211 1 1233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 197 PLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
+..++.+++.++..+++.+.+++++||++.++.+.+|.+...+.|+++|||+ +++.+++|+++.++|..+|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~-~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEP-ITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCc-CCHHHHHHHHHHHHHHheeeC
Confidence 4668889999999999999999999999999999999999999999999999 999999999999999999975
No 30
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.69 E-value=4.4e-15 Score=124.54 Aligned_cols=260 Identities=15% Similarity=0.119 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHhhhcc-cc-----------ccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhh
Q 022191 8 MFREQVLTYAYILLYIALSSGQIFFNKV-MK-----------VEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVA 75 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 75 (301)
.-...+....+++.-+.|-..+.+..+. -+ ++.+.+.+ ....++-++|-..+..+.|.++.+++++
T Consensus 36 fqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~--p~lfl~Pal~Di~gsslm~vgL~lTsAS 113 (372)
T KOG3912|consen 36 FQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN--PVLFLPPALCDIAGSSLMYVGLNLTSAS 113 (372)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC--cceecChHHHHHhhhHHHHHHHHHhhHH
Confidence 3455677777777776555444333221 11 11111222 2346778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc----------ccchHHHHHHHHHHHHHHHHHHH
Q 022191 76 FAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE----------ININWIGVVYQMGGVVGEALRLI 145 (301)
Q Consensus 76 ~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~----------~~~~~~G~~l~l~a~~~~a~~~v 145 (301)
.+|+++....+|+.+++.-+++++++.+||+++....+|+++....| .+....|+++.+++-+.-|...+
T Consensus 114 sfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v 193 (372)
T KOG3912|consen 114 SFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMV 193 (372)
T ss_pred HHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876543 12236799999999999999999
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhc-cccc---c-cc-ccCcc-----------hhHHHHHHHHH--
Q 022191 146 FMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE-KPKM---D-AL-ETWHF-----------PPLMLTLNCLC-- 206 (301)
Q Consensus 146 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~---~-~~-~~~~~-----------~~~~~~~~~~~-- 206 (301)
+.+|.+++. +++|.+...|..+++..++........ .+.. . .+ +.+.. ....+...+..
T Consensus 194 ~Eek~l~~~--nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vS 271 (372)
T KOG3912|consen 194 CEEKQLKKS--NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVS 271 (372)
T ss_pred HHHhhhhhc--cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhh
Confidence 999999865 689999999999999665444433221 1111 0 11 11111 11112222222
Q ss_pred HHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 207 TFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 207 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
-.+.|+...+..|..|+++-.++..++.....+++.....|. ++..|+.|.++.+.|.++|+...
T Consensus 272 iAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~-f~llqilGFliLi~Gi~lY~~il 336 (372)
T KOG3912|consen 272 IAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEY-FHLLQILGFLILIMGIILYNQIL 336 (372)
T ss_pred eeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 123377777888999999999999999999999999999999 99999999999999999998543
No 31
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.67 E-value=2e-16 Score=132.36 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=186.1
Q ss_pred hHHHHhhhccccccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhc-chhhHHHHHHHHHHHHHHHHHHHHcccccchhH
Q 022191 26 SSGQIFFNKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLY-ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRM 104 (301)
Q Consensus 26 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~ 104 (301)
.-|+.+.+|.....++++.|++ +..-.++...+.++|+|+++ ++.+...++++-+++-+++++++++|+|.+.+|
T Consensus 46 ~eGlif~skf~~~k~kiplk~Y----~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Q 121 (330)
T KOG1583|consen 46 TEGLIFTSKFFTVKPKIPLKDY----AITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQ 121 (330)
T ss_pred HhceeeeccccccCCCCchhhh----heehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhh
Confidence 3344444444433466666664 33445566788899999999 799999999999999999999999999999999
Q ss_pred HHHHHHHhhhheeeeec---ccc------------c----hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHH
Q 022191 105 LLIMSVISFGVVVASYG---EIN------------I----NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMY 165 (301)
Q Consensus 105 ~~~~~~~~~Gv~l~~~~---~~~------------~----~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~ 165 (301)
+.++.+..+|+++.... |.. . -..|+.+..+|.+..|...++|+..++|++ -|+.+.++
T Consensus 122 y~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyG--Kh~~EalF 199 (330)
T KOG1583|consen 122 YSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYG--KHWKEALF 199 (330)
T ss_pred hhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChHHHHH
Confidence 99999999999986542 110 0 146999999999999999999999999875 49999999
Q ss_pred HHhHHHHHHHHHHHH-hhcccc----c-----ccc-ccCcchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhh
Q 022191 166 YVSPCSALCLFIPWI-FLEKPK----M-----DAL-ETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKD 234 (301)
Q Consensus 166 ~~~~~~~~~l~~~~~-~~~~~~----~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~ 234 (301)
|....+.+..+...- +.+... . +.. ...+..++.++.+++..+..--..+..-.++++.+.++.-.++.
T Consensus 200 ytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRK 279 (330)
T KOG1583|consen 200 YTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRK 279 (330)
T ss_pred HHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHH
Confidence 999877654332210 000000 0 000 01223346678888888887777777788999999999999999
Q ss_pred HHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchh
Q 022191 235 WVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 235 v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~ 275 (301)
.+++++++..|.++ +++.+++|..+++.|-.+|.....+.
T Consensus 280 FvSLl~SiiyF~Np-ft~~h~lGa~lVF~Gt~~fa~~~~~~ 319 (330)
T KOG1583|consen 280 FVSLLFSIIYFENP-FTPWHWLGAALVFFGTLLFANVWNHP 319 (330)
T ss_pred HHHHhheeeEecCC-CCHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 99999999999999 99999999999999999998654433
No 32
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.52 E-value=4.6e-13 Score=112.06 Aligned_cols=220 Identities=17% Similarity=0.177 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc----ccc
Q 022191 50 SVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE----INI 125 (301)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~----~~~ 125 (301)
.....+.+..+.+.+.+.++.|++.+...+.+.+.-+.+++.+.++.++|..+.++.+..+...|++.....| +++
T Consensus 108 tY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF 187 (367)
T KOG1582|consen 108 TYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNF 187 (367)
T ss_pred HhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCc
Confidence 3556677777889999999999999999999999999999999999999999999999999999999877655 567
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccc--ccCcc-hhHHHHH
Q 022191 126 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL--ETWHF-PPLMLTL 202 (301)
Q Consensus 126 ~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~-~~~~~~~ 202 (301)
|..|+.+.-+|-++.|+-...|++.++..+ -+..++.+|...++...++.+..........+. ....+ ......+
T Consensus 188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~--~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~ 265 (367)
T KOG1582|consen 188 NLIGVMMISGALLADAVIGNVQEKAMKMNP--ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFL 265 (367)
T ss_pred ceeeHHHHHHHHHHHHHhhHHHHHHHhhCC--CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHH
Confidence 889999999999999999999999998764 466888888888888776666543221111111 11111 1233444
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 203 NCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 203 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
-++.+++........++..+|.+++.....+...++++++++|..+ +|.+..-|..++..|+.+--+.+
T Consensus 266 ~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKP-fT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 266 FSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKP-FTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCc-hHHHHhhhhHHHHHHHHhhcccC
Confidence 4566666666677779999999999999999999999999999999 99999999999999999877666
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.48 E-value=5.3e-15 Score=122.53 Aligned_cols=213 Identities=16% Similarity=0.179 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc--------c
Q 022191 52 IPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE--------I 123 (301)
Q Consensus 52 ~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~--------~ 123 (301)
+..++.-.=++.+..-|.||++....+.+-.-..+-+++++++++|.|.++.++.|+++++.|+++.+..| .
T Consensus 82 illa~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~agg 161 (336)
T KOG2766|consen 82 ILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGG 161 (336)
T ss_pred hheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCC
Confidence 33333333445566778999999999999998899999999999999999999999999999999987754 2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHH
Q 022191 124 NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLN 203 (301)
Q Consensus 124 ~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+.+..|+.+.++++-+||..++..+.+.| +.+..+++...++++.++..+- +..|.... ....|.+..+..+..
T Consensus 162 snp~~GD~lvi~GATlYaVSNv~EEflvk----n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~-~tl~w~~~i~~yl~f 235 (336)
T KOG2766|consen 162 SNPVKGDFLVIAGATLYAVSNVSEEFLVK----NADRVELMGFLGLFGAIISAIQ-FIFERHHV-STLHWDSAIFLYLRF 235 (336)
T ss_pred CCCccCcEEEEecceeeeeccccHHHHHh----cCcHHHHHHHHHHHHHHHHHHH-Hhhhccce-eeEeehHHHHHHHHH
Confidence 33467999999999999999999999988 5699999999999999887666 55554443 223444444444445
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 204 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 204 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
.+..++.+...-..+|..+++...+--......++++ ..||-+ .+|.-++..+.+..|.++|..+++
T Consensus 236 ~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYh-v~wLY~laF~~i~~GliiYs~re~ 302 (336)
T KOG2766|consen 236 ALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYH-VDWLYFLAFATIATGLIIYSTREK 302 (336)
T ss_pred HHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcc-hhhhhHHHHHHHHHhhEEeecccc
Confidence 5556665555666688888888777777777888887 789999 999999999999999999965443
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.29 E-value=3.5e-11 Score=102.28 Aligned_cols=190 Identities=13% Similarity=0.111 Sum_probs=123.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheee--------------------eeccc-------cc
Q 022191 73 SVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA--------------------SYGEI-------NI 125 (301)
Q Consensus 73 ~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~--------------------~~~~~-------~~ 125 (301)
+.+.....++.+++++++.+....+||.+..|+++..+...|+... ..++. ..
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~ 82 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN 82 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence 4556677778888888888888888887788888888877777641 11111 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccc---cccCcchhHHHHH
Q 022191 126 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA---LETWHFPPLMLTL 202 (301)
Q Consensus 126 ~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 202 (301)
...|....+.+.++.++..+++++..|+++ ...+........++.+.........+...... ...+....+.+
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 158 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKDGD--TMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIV-- 158 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccCCC--CchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHH--
Confidence 356777788888888999999999866432 22222222222222222111111111111000 11112212222
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHh
Q 022191 203 NCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY 268 (301)
Q Consensus 203 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~ 268 (301)
.+.....+.+..+++++.++.+.++....+++.+.++++++|||+ ++..+++|+.+++.|+.+|
T Consensus 159 -~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~-ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 159 -GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAK-ISSTFYLGAILVFLATFLY 222 (222)
T ss_pred -HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHeeeEeC
Confidence 122333344577889999999999999999999999999999999 9999999999999998765
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.23 E-value=1e-10 Score=89.60 Aligned_cols=125 Identities=18% Similarity=0.227 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHHHHHHHHH
Q 022191 138 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLV 217 (301)
Q Consensus 138 ~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (301)
++||.+.+..|+..+ +.|+.....+....+.+ +++.....+..+. ...+..........+.+.....+..++++
T Consensus 1 ~~~a~~~~~~k~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 74 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK----KISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYA 74 (126)
T ss_pred ceeeeHHHHHHHHhc----cCCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHH
Confidence 468889999999887 36999999999999887 5555555443321 11122222233333334345667778889
Q ss_pred HHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 218 ISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 218 i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
+++.++...+...+++|+++.++++++++|+ +++.+++|+.+++.|+.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~-~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 75 LKYISASIVSILQYLSPVFAAILGWLFLGER-PSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999999999998754
No 36
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.22 E-value=5.1e-11 Score=95.48 Aligned_cols=225 Identities=15% Similarity=0.133 Sum_probs=166.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeee
Q 022191 41 GMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 120 (301)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~ 120 (301)
.++-|...++..|.++++.+.+..+..|++.++++.++-+..++..|+.+++++.+++|+...+.++.++.+.|+++..+
T Consensus 46 G~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 46 GFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred CceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 34455566677888889999999999999999999999999999999999999999999999999999999999999986
Q ss_pred cc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHH----HHHHHHHh-hcc-cccccccc
Q 022191 121 GE--ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSAL----CLFIPWIF-LEK-PKMDALET 192 (301)
Q Consensus 121 ~~--~~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~-~~~-~~~~~~~~ 192 (301)
.| ...++.|+..++++++..|.|-|.-|......+ . -+...+++..+.+ ..+|+... +.+ .+..+..
T Consensus 126 ~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn--~--Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA- 200 (290)
T KOG4314|consen 126 ADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN--F--GDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFA- 200 (290)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc--c--hhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHh-
Confidence 55 346789999999999999999999998876432 2 2222223322222 11222211 111 1111111
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 193 WHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
..+|...+..+......++.....+..+.|...|+-.....+....++.++-+-. .+...+.|..++..|.++.-..+
T Consensus 201 -~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~-~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 201 -AAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELE-FNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred -hCCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHH-HHHHHHHHHHHHHHhHHheeccc
Confidence 1223444445555556666666667888899999888888888899988766666 89999999999999998876544
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.13 E-value=8e-10 Score=82.50 Aligned_cols=134 Identities=16% Similarity=0.135 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHH
Q 022191 130 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA 209 (301)
Q Consensus 130 ~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (301)
.+++++++++++...++.|.-++ +.||...+..-.....+.+................ .+..+..++.+|+.+..
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~----~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~-~~k~~lflilSGla~gl 79 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE----GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEI-GPKSWLFLILSGLAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc----ccCccHHHHHHHHHHHHHHHHHHHhcCceeccccc-CcceehhhhHHHHHHHH
Confidence 57899999999999999988776 35666666666665555554444433222222111 22224557778888888
Q ss_pred HHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 210 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 210 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
..++++++++.-.+.......-..++++.+++++++||+ +|..+++|++++..|..+.+
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~-ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGER-LSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhCeeeEe
Confidence 899999999999999999999999999999999999999 99999999999999987654
No 38
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.12 E-value=3.7e-08 Score=84.58 Aligned_cols=214 Identities=14% Similarity=0.090 Sum_probs=155.9
Q ss_pred CCCCH--HHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHH-HHHHHHHHHHHHHHcccccchhHHH----HHHHHh
Q 022191 40 DGMTL--EIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLL----IMSVIS 112 (301)
Q Consensus 40 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pi~~~~~~~~~~~e~~s~~~~~----~~~~~~ 112 (301)
|..+. +. ...-+..++++..++...+.++++.++|.+.-+. ..+-+.+.+++.++++|..+..+++ ++++.+
T Consensus 36 p~~~~~~~~-~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~lii 114 (269)
T PF06800_consen 36 PAFSMSGTS-FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLII 114 (269)
T ss_pred CCcchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHH
Confidence 44543 55 3457888999999999999999999998877666 4677778999999999988876654 888889
Q ss_pred hhheeeeecccc--------chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcc
Q 022191 113 FGVVVASYGEIN--------INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEK 184 (301)
Q Consensus 113 ~Gv~l~~~~~~~--------~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 184 (301)
+|+.+.+..|.+ ....|++..+++.+.|..|.+..|.. +.+++....=++.-..+..+...... .
T Consensus 115 iGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~------~~~~~~~~lPqaiGm~i~a~i~~~~~-~ 187 (269)
T PF06800_consen 115 IGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF------HVSGWSAFLPQAIGMLIGAFIFNLFS-K 187 (269)
T ss_pred HHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc------CCChhHhHHHHHHHHHHHHHHHhhcc-c
Confidence 999987765422 12458999999999999999987652 46787776644433222222222222 1
Q ss_pred ccccccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchh----hhHHHHH
Q 022191 185 PKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTII----NLFGYGI 260 (301)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~----~iiG~~l 260 (301)
....+ ...+.-+.+|++-...+.+++...++.+..+.=.++.+..+++.+.|.+++||+ -+.. .++|.++
T Consensus 188 ~~~~~-----k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~-Kt~ke~~~~~~G~~L 261 (269)
T PF06800_consen 188 KPFFE-----KKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEK-KTKKEMIYTLIGLIL 261 (269)
T ss_pred ccccc-----cchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEec-CchhhHHHHHHHHHH
Confidence 11111 112334556666666677788888999999999999999999999999999999 4443 6788888
Q ss_pred HHHHHHH
Q 022191 261 AIAGVAA 267 (301)
Q Consensus 261 il~g~~~ 267 (301)
++.|..+
T Consensus 262 iv~G~il 268 (269)
T PF06800_consen 262 IVIGAIL 268 (269)
T ss_pred HHHhhhc
Confidence 8888654
No 39
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.98 E-value=1.7e-09 Score=81.78 Aligned_cols=74 Identities=20% Similarity=0.232 Sum_probs=65.4
Q ss_pred HHHHHHHHH-HHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecccc
Q 022191 50 SVIPIGAMF-AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEIN 124 (301)
Q Consensus 50 ~~~~~~~~~-~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~ 124 (301)
..+..+.+. ..++.++++|+++.+ +.+..+.+++|+++++++.+++|||++++++.++.++++|++++..+|.+
T Consensus 36 ~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 36 WLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 355555555 488999999999999 58889999999999999999999999999999999999999998877654
No 40
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.88 E-value=1.1e-07 Score=82.64 Aligned_cols=135 Identities=13% Similarity=0.111 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccc--cccc--cCcchhHHHHHHH
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM--DALE--TWHFPPLMLTLNC 204 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~ 204 (301)
|.++.++++++|+...+..|.+ . +.+|.++.++-..++.+.+.+.......... .... ............+
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~~-~----~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKLL-K----PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG 77 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-c----cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence 7889999999999999999873 3 3799999999999988776665433221110 0000 1111223344555
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 205 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 205 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
+.....+.+.+++++++++.++++..+..|++..++++++++|+ ++..+++|..+.+.|+.+..
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek-~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKER-ISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHH
Confidence 55566677788999999999999999999999999999999999 99999999999999987653
No 41
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.87 E-value=9.4e-08 Score=84.79 Aligned_cols=137 Identities=9% Similarity=0.105 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccc-c-ccccCcchhHHHHHH
Q 022191 126 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM-D-ALETWHFPPLMLTLN 203 (301)
Q Consensus 126 ~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 203 (301)
...|+++.++++++|+...+..|.. . +++|.++.++...++.+.+.+.......... . ....+.. ......+
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~----~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKLI-Y----YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQK-IFMLAVS 79 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHh-c----CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHH-HHHHHHH
Confidence 4569999999999999999999754 2 4799999999999988776665543221110 0 0011111 1223345
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 204 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 204 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
++.....+.+.+++++++++.++++..+..|++..++++++++|+ ++..+++|+++.++|+.+..
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~-~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGER-FRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHH
Confidence 555556677889999999999999999999999999999999999 99999999999999998654
No 42
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.84 E-value=1.1e-07 Score=83.69 Aligned_cols=132 Identities=10% Similarity=0.077 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhc-cccccccccCcchhHHHHHHHHHHH
Q 022191 130 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE-KPKMDALETWHFPPLMLTLNCLCTF 208 (301)
Q Consensus 130 ~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (301)
.++.+++++++|.+.+.+|+..+++ ++ ...+....+.+.+.|...... ...... .....+.....+++...
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~----~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 74 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE----PD--FLWWALLAHSVLLTPYGLWYLAQVGWSR--LPATFWLLLAISAVANM 74 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch----hH--HHHHHHHHHHHHHHHHHHHhcccCCCCC--cchhhHHHHHHHHHHHH
Confidence 5688999999999999999876632 33 235555555656655554321 111111 11112334555666666
Q ss_pred HHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 209 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 209 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
..+.+.+.+.++.++...+.+.+..|+++.+++++++||+ ++..+++|.++++.|+.+...
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~-~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGET-LSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhc
Confidence 7777888899999999999999999999999999999999 999999999999999987653
No 43
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.77 E-value=5.5e-08 Score=74.29 Aligned_cols=79 Identities=24% Similarity=0.166 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheee
Q 022191 40 DGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
++.++++.......+.+....+..+++.++++.+++.++++.+++|+++.+++++++||++++.+++++++++.|+.+.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 46 KNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred cCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 5566666554444444446889999999999999999999999999999999999999999999999999999998764
No 44
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.66 E-value=1.2e-07 Score=71.04 Aligned_cols=89 Identities=13% Similarity=0.037 Sum_probs=74.9
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHH
Q 022191 31 FFNKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSV 110 (301)
Q Consensus 31 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~ 110 (301)
+..+..+.....++|.+ ..+...|+..+.++.++|.|++-.+++...-+-.++|+++.++++++++||++..+|+|+++
T Consensus 51 ~~~g~~~~~~~~~~k~~-lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~L 129 (140)
T COG2510 51 LVTGNWQAGGEIGPKSW-LFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVL 129 (140)
T ss_pred HhcCceecccccCccee-hhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 44443333334567764 45777778888899999999999999999999999999999999999999999999999999
Q ss_pred Hhhhheeeee
Q 022191 111 ISFGVVVASY 120 (301)
Q Consensus 111 ~~~Gv~l~~~ 120 (301)
+.+|+++.+.
T Consensus 130 I~~Gailvs~ 139 (140)
T COG2510 130 IVIGAILVSL 139 (140)
T ss_pred HHhCeeeEec
Confidence 9999998753
No 45
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.64 E-value=1.3e-06 Score=79.28 Aligned_cols=136 Identities=8% Similarity=0.093 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHH
Q 022191 130 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA 209 (301)
Q Consensus 130 ~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (301)
+...+..-++|+.+.++.|..++. .+++..+.++-..++.+++++.....+.........+..... +...++....
T Consensus 15 ~~~~~~~q~~~~~~~~~~k~a~~~---G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~-l~l~g~~g~~ 90 (358)
T PLN00411 15 LTAMLATETSVVGISTLFKVATSK---GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSK-IGLLGFLGSM 90 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC---CCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHH-HHHHHHHHHH
Confidence 456667778899999999999864 578999999999999988888776554322111112222222 2223444444
Q ss_pred HHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhh------cCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 210 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALL------FADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 210 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~------fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
++...+..++++++..++++.+..|+++.++++++ ++|+ ++..+++|.++.++|+.+...
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er-~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER-SSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhccc-ccHHHHHHHHHHHHHHHHHHH
Confidence 55568888999999999999999999999999999 6999 999999999999999987654
No 46
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.60 E-value=6.1e-07 Score=67.41 Aligned_cols=67 Identities=19% Similarity=0.060 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeee
Q 022191 53 PIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 119 (301)
Q Consensus 53 ~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~ 119 (301)
....+++..+.+...+++..|.+.+..+.++.++++.+++++++|||++++|++++.++++|+++..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3346678889999999999999999999999999999999999999999999999999999998654
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.47 E-value=7.2e-06 Score=72.60 Aligned_cols=69 Identities=16% Similarity=0.019 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeee
Q 022191 51 VIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 119 (301)
Q Consensus 51 ~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~ 119 (301)
+..+-+.+..+..+.+.|+.+.|.+..+-+....-++.++++..++|||++++++.|+.+++.|..+..
T Consensus 53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 344445567788899999999999999999999999999999999999999999999999999998754
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.40 E-value=2.3e-05 Score=60.35 Aligned_cols=120 Identities=13% Similarity=0.034 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHH
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 208 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (301)
|+++.+.+.++.+...++-|+-+++.+ ..+... . . ... ... .. ++ ...+..+.+...
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~---~-~----~~~-~~~-~~------~p------~~~i~lgl~~~~ 59 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAW---D-F----IAA-LLA-FG------LA------LRAVLLGLAGYA 59 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCC-Cccchh---H-H----HHH-HHH-Hh------cc------HHHHHHHHHHHH
Confidence 778899999999999999988877543 111111 0 0 000 000 00 00 011222233333
Q ss_pred HHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHh--hcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 209 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSAL--LFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 209 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~--~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
..+..+..++++.+...+..+..+.++...+.++. +|||+ +|+.+++|++++++|+.+.+..+
T Consensus 60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~-ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNET-FSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHhccCC
Confidence 44556888899999999999888888888777775 89999 99999999999999999987543
No 49
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.40 E-value=0.00022 Score=63.89 Aligned_cols=223 Identities=11% Similarity=0.005 Sum_probs=142.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHH-HHHHHHHHHHHHHHccccc---c----hhHHHHHHHHhh
Q 022191 42 MTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVM---S----CRMLLIMSVISF 113 (301)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pi~~~~~~~~~~~e~~---s----~~~~~~~~~~~~ 113 (301)
.+.+. ....+..+++.+.++..++.+.++..++...-+. .++-+...++..++++|-. + ..-.++++++++
T Consensus 68 ~~~~~-~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~lili 146 (345)
T PRK13499 68 FSGST-LLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALI 146 (345)
T ss_pred cCHHH-HHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHH
Confidence 34555 3457888999999999999999999999987665 5788888899989988754 2 345788888899
Q ss_pred hheeeee----ccc--------cc-hHHHHHHHHHHHHHHHHHH-------HHHHHHHhhcCCCCCHHHHHHHHh---HH
Q 022191 114 GVVVASY----GEI--------NI-NWIGVVYQMGGVVGEALRL-------IFMEILVKRKGLKLNPISVMYYVS---PC 170 (301)
Q Consensus 114 Gv~l~~~----~~~--------~~-~~~G~~l~l~a~~~~a~~~-------v~~~~l~~~~~~~~~~~~~~~~~~---~~ 170 (301)
|+.+... +|. +. ...|+++++++.+.+++|+ ...+.... . ..++.....-+. +.
T Consensus 147 Gi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~--g~~~~~~~lp~~~~~~~ 223 (345)
T PRK13499 147 GVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-L--GVDPLYAALPSYVVIMG 223 (345)
T ss_pred HHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-c--CCCchHHHHHHHHHHHH
Confidence 9998655 322 11 2579999999999999998 44333211 1 233333222222 23
Q ss_pred HHHHHHHHHHhh---ccccc---cccccC----cchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH---hh-hhhhHH
Q 022191 171 SALCLFIPWIFL---EKPKM---DALETW----HFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRV---AG-VVKDWV 236 (301)
Q Consensus 171 ~~~~l~~~~~~~---~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~---~~-~l~~v~ 236 (301)
+.+..-...... ..+.. .+.... .......+++|+.-+..+..+...-++.+.....+ +. .+.-++
T Consensus 224 G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Vii 303 (345)
T PRK13499 224 GGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLC 303 (345)
T ss_pred HHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHH
Confidence 333322221121 11111 111111 11223456677777777777776666664444433 33 666689
Q ss_pred HHHhHHhhcCCcccc------hhhhHHHHHHHHHHHHhhh
Q 022191 237 VVLFSALLFADTKLT------IINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 237 ~~~~~~~~fge~~~t------~~~iiG~~lil~g~~~~~~ 270 (301)
+.+.|.+ +||. =+ ...++|.+++++|..+...
T Consensus 304 stlwGi~-lkE~-K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 304 GNLWGLV-LKEW-KGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HHHhhhh-hhhc-cCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 9999994 9999 44 4578999999999887653
No 50
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.33 E-value=1.1e-05 Score=69.98 Aligned_cols=118 Identities=12% Similarity=0.037 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 022191 141 ALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISH 220 (301)
Q Consensus 141 a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 220 (301)
+...+..|...+. ..++.....+....+.+.+.+..... ... .........+++.....+...+.++++
T Consensus 2 g~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~---~~~~~~~~~~~~~~~l~~~~~~~a~~~ 70 (260)
T TIGR00950 2 GTTGVVIGQYLEG---QVPLYFAVFRRLIFALLLLLPLLRRR-----PPL---KRLLRLLLLGALQIGVFYVLYFVAVKR 70 (260)
T ss_pred cchHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHhc-----cCH---hHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455666776653 35888888888888877766554322 111 111234555555556667778899999
Q ss_pred cchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 221 TSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 221 ~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
+++.+.++...+.|+++.+++.++++|+ +++.+++|+.+.+.|+.+...
T Consensus 71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~-~~~~~~~gi~i~~~Gv~li~~ 119 (260)
T TIGR00950 71 LPVGEAALLLYLAPLYVTLLSDLMGKER-PRKLVLLAAVLGLAGAVLLLS 119 (260)
T ss_pred cChhhhHHHHhhhHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHhhcc
Confidence 9999999999999999999999999999 999999999999999988653
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.29 E-value=2.9e-05 Score=68.81 Aligned_cols=130 Identities=15% Similarity=0.162 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHH
Q 022191 128 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT 207 (301)
Q Consensus 128 ~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (301)
.+++..++++++|+...+..|...+ .++|..+.++-...+.+++++.. ..+.. ...+ ...++.+++..
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~----~~~P~~~~~~R~~~a~l~l~~~~---~~~~~--~~~~---~~~~~~~~l~~ 71 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSE----SLGPVGGAAMIYSVSGLLLLLTV---GFPRL--RQFP---KRYLLAGGLLF 71 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHc----cCChHHHHHHHHHHHHHHHHHHc---ccccc--cccc---HHHHHHHhHHH
Confidence 3577899999999999999998766 57999999998888877765542 11111 1111 11222333333
Q ss_pred HHHHHHHHHHH----HhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 208 FALNLSVFLVI----SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 208 ~~~~~~~~~~i----~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
...+...+..+ +..++.++++..++.|++..++++++++|+ ++..+++|+++.+.|+.+...
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~-~~~~~~~g~~l~~~Gv~li~~ 137 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQK-ANWLLIPGLLLALAGVAWVLG 137 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHhHhheec
Confidence 33333333333 456788889999999999999999999999 999999999999999987653
No 52
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.25 E-value=6.9e-05 Score=66.56 Aligned_cols=125 Identities=18% Similarity=0.176 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHH-HH
Q 022191 130 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLC-TF 208 (301)
Q Consensus 130 ~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 208 (301)
.++.++++++|+...+..|...+ +.+|..+.++-..++.+.+++... .+.. .+ ......++. ..
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~----~~~p~~~~~~R~~~a~~~l~~~~~---~~~~----~~----~~~~~~g~~~~~ 70 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLH----NMPPLMLAGLRFMLVAFPAIFFVA---RPKV----PL----NLLLGYGLTISF 70 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHHHhc---CCCC----ch----HHHHHHHHHHHH
Confidence 35688899999999999998775 479999999998877665544321 1111 11 111122222 22
Q ss_pred HHHHHHHHHHHh-cchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 209 ALNLSVFLVISH-TSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 209 ~~~~~~~~~i~~-~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
..+...+...++ .++..+++.....|++..++++++++|+ ++..+++|.++.++|+.+...
T Consensus 71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~-~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGER-LQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHhHHHhcc
Confidence 223334556666 5778899999999999999999999999 999999999999999887653
No 53
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.25 E-value=7.2e-05 Score=67.97 Aligned_cols=126 Identities=12% Similarity=0.122 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCC-HHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHHHHHHHHH
Q 022191 139 GEALRLIFMEILVKRKGLKLN-PISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLV 217 (301)
Q Consensus 139 ~~a~~~v~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (301)
+-..++++.|..++. .+ |..+..+...++.+...+.......+. +....+...+..++..+++....+...+.+
T Consensus 60 ~s~~~~~~nK~vl~~----~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~llp~gl~~~~~~~~~~~s 134 (350)
T PTZ00343 60 LNVLYVVDNKLALNM----LPLPWTISSLQLFVGWLFALLYWATGFRKI-PRIKSLKLFLKNFLPQGLCHLFVHFGAVIS 134 (350)
T ss_pred HHHHHHHHHHHHHHh----CChhHHHHHHHHHHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334567778888763 46 999999998888765444432211111 111111112223444455555555556678
Q ss_pred HHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 218 ISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 218 i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
++++++..+.+...+.|+++++++.++++|+ ++..+++|.++++.|+.+...
T Consensus 135 l~~~svs~~~iika~~Pvft~lls~~~l~ek-~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 135 MGLGAVSFTHVVKAAEPVFTALLSILFLKQF-LNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HhhccHHHHHHHHHhhHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999999999 999999999999999987764
No 54
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.24 E-value=6.5e-05 Score=66.51 Aligned_cols=131 Identities=13% Similarity=0.035 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHH
Q 022191 130 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA 209 (301)
Q Consensus 130 ~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (301)
++..+.-.+.|+...+..|...+ +.+|..+.++-..++++.+++..... ...... ..........+.+....
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~----~~~p~~~~~~R~~~a~l~ll~~~~~~-~~~~~~---~~~~~~~~~~g~~~~~~ 81 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVE----SWPPLMMAGVRFLIAGILLLAFLLLR-GHPLPT---LRQWLNAALIGLLLLAV 81 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHHHHh-CCCCCc---HHHHHHHHHHHHHHHHH
Confidence 45577788999999999997765 57999999999999988877765432 221111 11111222233222223
Q ss_pred HHHHHHHHH-HhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 210 LNLSVFLVI-SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 210 ~~~~~~~~i-~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
.+...+... +..++..+++..++.|++..+++.+ +||+ ++..+++|..+.++|+.+...
T Consensus 82 ~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~-~~~~~~~~~~la~~Gv~ll~~ 141 (292)
T PRK11272 82 GNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIR-TRKLEWLGIAIGLAGIVLLNS 141 (292)
T ss_pred HHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hccc-CchhHHHHHHHHHHhHHHHhc
Confidence 344455566 8889999999999999999999985 7999 999999999999999987753
No 55
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.22 E-value=2.1e-05 Score=59.32 Aligned_cols=63 Identities=19% Similarity=0.190 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 209 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 209 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
..+..++++.++.++ ..+....+.|+++.+++.++++|+ ++..+++|..++++|+.+....+.
T Consensus 47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er-~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKER-LSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhhhhc
Confidence 556667788999985 777999999999999999999999 999999999999999999876553
No 56
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.10 E-value=8.6e-05 Score=63.86 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccc-cccccCcchhHHHHHHH
Q 022191 126 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM-DALETWHFPPLMLTLNC 204 (301)
Q Consensus 126 ~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 204 (301)
+..|+++++.|-+.|++--.+.|.+. +.++.++..+-.+++.+.++........... ......+..+.....++
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~-----~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a 79 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLE-----PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA 79 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence 34699999999999999888776653 4699999999999998876665544322211 11111111233444445
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 205 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 205 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
..-..-.....|+...-...++|.-.+++|.+.+++|.++++|+ ++..|++...+..+|+..-..
T Consensus 80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkEr-ls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKER-LSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHH
Confidence 54444444567888899999999999999999999999999999 999999999999999976554
No 57
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.06 E-value=6.5e-05 Score=57.90 Aligned_cols=73 Identities=19% Similarity=0.136 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHH--HcccccchhHHHHHHHHhhhheeeeecc
Q 022191 50 SVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVA--AGLEVMSCRMLLIMSVISFGVVVASYGE 122 (301)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~--~~~e~~s~~~~~~~~~~~~Gv~l~~~~~ 122 (301)
.+..+-.+++....+++.+++..|.+.+.-+.+..+..+.+.++. ++||++++.+++|+.++++|+.+...++
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 455667778889999999999999999999999999888888885 8999999999999999999999876543
No 58
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.05 E-value=0.00026 Score=53.11 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 210 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 210 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
.+.....++++.+...+.....+.++.+.++|+++|||+ +++.+++|++++++|+....
T Consensus 50 ~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~-ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 50 AMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEP-VSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHh
Confidence 345567778999999999999999999999999999999 99999999999999998754
No 59
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.05 E-value=0.00018 Score=64.11 Aligned_cols=128 Identities=15% Similarity=0.070 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 022191 142 LRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHT 221 (301)
Q Consensus 142 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (301)
.+.+.++++.++......+..+++.+.....+...+.......+.. ...+ +.-....++...........++++.
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~al~~i 88 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS-RKIP----LKKYAILSFLFFLASVLSNAALKYI 88 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC-CcCh----HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4667889988865422247777777777666655444433321111 1111 1222333455556666678889999
Q ss_pred chhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchh
Q 022191 222 SALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 222 ~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~ 275 (301)
+..+..+....+++..++++.+++|++ .+..++++..++.+|+.+....+.+.
T Consensus 89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~-y~~~~~~~v~li~~Gv~~~~~~~~~~ 141 (303)
T PF08449_consen 89 SYPTQIVFKSSKPIPVMILGVLILGKR-YSRRQYLSVLLITIGVAIFTLSDSSS 141 (303)
T ss_pred ChHHHHHHhhhHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHhhHheeeeccccc
Confidence 999999999999999999999999999 99999999999999999988765433
No 60
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.02 E-value=0.00032 Score=62.39 Aligned_cols=121 Identities=11% Similarity=0.068 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 022191 142 LRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHT 221 (301)
Q Consensus 142 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (301)
.++++.|..+++- ..|..+..+....+.+...+.......+. ....... +..+...|+.........+..++++
T Consensus 16 ~~~~~NK~~l~~~---~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~g~~~~~~~~~~~~~l~~~ 89 (302)
T TIGR00817 16 YFNIYNKKLLNVF---PYPYFKTLISLAVGSLYCLLSWSSGLPKR--LKISSAL-LKLLLPVAIVHTIGHVTSNVSLSKV 89 (302)
T ss_pred HHHHHHHHHHhhC---ChhHHHHHHHHHHHHHHHHHHHHhCCCCC--CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3556678887631 36777777777766655433311111111 1111111 2223333444455566788889999
Q ss_pred chhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 222 SALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 222 ~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
++...++...+.|++..++++++++|+ ++..+++|..+.++|+.+..
T Consensus 90 s~s~~~li~~~~Pv~~~ll~~~~~~e~-~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 90 AVSFTHTIKAMEPFFSVVLSAFFLGQE-FPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred cHHHHHHHHhcchHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999 99999999999999997654
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.02 E-value=0.00011 Score=65.02 Aligned_cols=132 Identities=14% Similarity=-0.008 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHH
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 208 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (301)
|++++++++++|+...+..|++. +.++.+... ..++.+.+.........+.. .....+...+.+|+.-.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-----g~~~~~~~~--~~~g~l~~~~~~~~~~~~~~----~~~~~~~~g~l~G~~w~ 70 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-----GGPYSQTLG--TTFGALILSIAIAIFVLPEF----WALSIFLVGLLSGAFWA 70 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-----CCHHHHHHH--HHHHHHHHHHHHHHHhCCcc----cccHHHHHHHHHHHHHH
Confidence 67899999999999999988763 245555442 33444443333333221211 11112233555556666
Q ss_pred HHHHHHHHHHHhcchhHHHHhhh-hhhHHHHHhHHhhcCCcccchhh----hHHHHHHHHHHHHhhhhh
Q 022191 209 ALNLSVFLVISHTSALTIRVAGV-VKDWVVVLFSALLFADTKLTIIN----LFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 209 ~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~~~~~~fge~~~t~~~----iiG~~lil~g~~~~~~~~ 272 (301)
..++.++.++++++...+-...+ +.++.+.+++.++|||+ .+..+ ++|.++++.|+.+....+
T Consensus 71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~-~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEW-STSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhHheEEecc
Confidence 66888999999999998877777 88889999999999999 99999 999999999998875443
No 62
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.86 E-value=0.00062 Score=61.02 Aligned_cols=142 Identities=18% Similarity=0.168 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHH
Q 022191 127 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLC 206 (301)
Q Consensus 127 ~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
+.+.+++..-++|-+..++.+..+.++ +.+.+..+ .++....-.+...+......+... ........++.-+.-+++
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Q-s~~~Y~~l~~vy~~~~~~r~~~~~-~~~~~~~~~w~y~lla~~ 88 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQ-SFFNYVLLALVYTPILLYRRGFKK-WLKVLKRPWWKYFLLALL 88 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHH-HHHHHHHHHHHHhhhhhhcccccc-chhhcchhHHHHHHHHHH
Confidence 346667777777777777778877765 44434333 444443333333333222211110 111111112222223567
Q ss_pred HHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 207 TFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 207 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
=...|+....+.++++.+...++.....++.+++++++++++ .++.+++|+.++++|+.+.....
T Consensus 89 Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~r-y~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 89 DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRR-YSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhheeeec
Confidence 777788899999999999999999999999999999999999 99999999999999998776554
No 63
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.85 E-value=0.0014 Score=57.25 Aligned_cols=141 Identities=21% Similarity=0.115 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHH
Q 022191 127 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLC 206 (301)
Q Consensus 127 ~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
..+....+..++.|+......+...+. ..+......+......+...+... .+ +........ ......+..++.
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~ 79 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLLLPLLL-LE-PRGLRPALR-PWLLLLLLALLG 79 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHHHHHHH-hh-ccccccccc-chHHHHHHHHHH
Confidence 457778888889999988888776552 235555555455545444222211 11 100111111 122344455555
Q ss_pred HHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHH-hhcCCcccchhhhHHHHHHHHHHHHhhhhhch
Q 022191 207 TFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSA-LLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 207 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~-~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~ 274 (301)
....+..++..++++++..........|++..+++. ++++|+ ++..++.|..+.+.|+.+.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGER-LSLLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHheecCCCc
Confidence 555667788889999999999999999999999997 777999 9999999999999999988765543
No 64
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.84 E-value=0.00018 Score=63.70 Aligned_cols=65 Identities=14% Similarity=0.022 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeee
Q 022191 55 GAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 119 (301)
Q Consensus 55 ~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~ 119 (301)
-++..+.+.++++++++.+++.++.+.+++|++..++++++++|+++..+++|..++++|++...
T Consensus 216 v~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 216 ILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 33456678899999999999999999999999999999999999999999999999999988764
No 65
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.77 E-value=0.0022 Score=50.08 Aligned_cols=132 Identities=20% Similarity=0.277 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHH
Q 022191 130 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA 209 (301)
Q Consensus 130 ~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (301)
.++++.+..+-+....+..++.++.+ +|..-.......+.+.+.......+.++..... ..+ +....+|+++..
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g---s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~--~~p-~w~~lGG~lG~~ 76 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG---SPLVASFISFGVGFILLLIILLITGRPSLASLS--SVP-WWAYLGGLLGVF 76 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHHHHHHHHHHHHHhcccccchhc--cCC-hHHhccHHHHHH
Confidence 56788888888888888888877532 588888888888887776666665544222111 112 223336777777
Q ss_pred HHHHHHHHHHhcchhHHHHhhhhhh-HHHHHhHHh-hcCCc--ccchhhhHHHHHHHHHHHH
Q 022191 210 LNLSVFLVISHTSALTIRVAGVVKD-WVVVLFSAL-LFADT--KLTIINLFGYGIAIAGVAA 267 (301)
Q Consensus 210 ~~~~~~~~i~~~~a~~~s~~~~l~~-v~~~~~~~~-~fge~--~~t~~~iiG~~lil~g~~~ 267 (301)
.-......+++.++........... +.+++++.+ .||.+ ++++.+++|..++++|+.+
T Consensus 77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7667778889999998888777765 566777776 44433 2999999999999999863
No 66
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.71 E-value=0.00026 Score=61.71 Aligned_cols=71 Identities=13% Similarity=-0.026 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeee
Q 022191 50 SVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 120 (301)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~ 120 (301)
.+..+-+.+..+-..+|.|+.+.|++..+-+.+++.+..++++..++|||+++...+|+.++++|-.+++.
T Consensus 66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 35556667888999999999999999999999999999999999999999999999999999999998765
No 67
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.64 E-value=0.00079 Score=51.01 Aligned_cols=70 Identities=17% Similarity=0.131 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhHHHHH-HHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeee
Q 022191 51 VIPIGAMFAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 120 (301)
Q Consensus 51 ~~~~~~~~~~~~~~~~~al~~~~~~~~~vl-~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~ 120 (301)
......+++.++.+...+++++|.+.+-.+ .....+.+.+++.++++|++++.+++++.++++|++.+..
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 455677788899999999999999997766 4689999999999999999999999999999999997654
No 68
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.54 E-value=0.0021 Score=47.97 Aligned_cols=70 Identities=17% Similarity=0.228 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhHHHHH-HHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeee
Q 022191 51 VIPIGAMFAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 120 (301)
Q Consensus 51 ~~~~~~~~~~~~~~~~~al~~~~~~~~~vl-~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~ 120 (301)
......++...+.+...+++..|.+.+--+ .....+.+.+.++++++|++++.+++++.++++|++....
T Consensus 33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 345567778888888999999999997776 4588999999999999999999999999999999998754
No 69
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.53 E-value=1.4e-05 Score=66.84 Aligned_cols=217 Identities=14% Similarity=0.121 Sum_probs=150.1
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHH-HHHHHHHHHHHHHcccccchhH----HHHHHHHhh
Q 022191 39 EDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKA-IMPVAVFILGVAAGLEVMSCRM----LLIMSVISF 113 (301)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~-~~pi~~~~~~~~~~~e~~s~~~----~~~~~~~~~ 113 (301)
.|..+.+.+. --+..+++++.++...+-|.++.++|.+.-+.+ ++-+-+.+++.+.+||..+..+ ..++++.+.
T Consensus 51 ~p~~T~~~~i-v~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAlilivi 129 (288)
T COG4975 51 SPELTLTIFI-VGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVI 129 (288)
T ss_pred cCccchhhHH-HHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHH
Confidence 4566677644 466778889999999999999999988776654 6677788899999999988766 568888999
Q ss_pred hheeeeeccc--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccc
Q 022191 114 GVVVASYGEI--------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKP 185 (301)
Q Consensus 114 Gv~l~~~~~~--------~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 185 (301)
|+.+.+..|. +..-.|+...+.+.+.|-.|.+..+.. +++.+....-++.-..+..+......+.+
T Consensus 130 G~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f------~v~g~saiLPqAiGMv~~ali~~~~~~~~ 203 (288)
T COG4975 130 GIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF------DVDGLSAILPQAIGMVIGALILGFFKMEK 203 (288)
T ss_pred hheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc------cccchhhhhHHHHHHHHHHHHHhhccccc
Confidence 9999887653 112358888889999999888876654 34555555444332222222222221111
Q ss_pred cccccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchh----hhHHHHHH
Q 022191 186 KMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTII----NLFGYGIA 261 (301)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~----~iiG~~li 261 (301)
. .+-..+.-+..|+.-...|+.++.+-++.+-.+.=.++.+.-+.+.+-|.++++|+ -|.. -++|++++
T Consensus 204 ~------~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ek-KtkkEm~~v~iGiili 276 (288)
T COG4975 204 R------FNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEK-KTKKEMVYVIIGIILI 276 (288)
T ss_pred c------hHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEecc-CchhhhhhhhhhHHHH
Confidence 1 11112344445555556677777777777777766777888899999999999999 5555 46788888
Q ss_pred HHHHHHhh
Q 022191 262 IAGVAAYN 269 (301)
Q Consensus 262 l~g~~~~~ 269 (301)
++|..+..
T Consensus 277 vvgai~lg 284 (288)
T COG4975 277 VVGAILLG 284 (288)
T ss_pred HHHhhhhh
Confidence 88877654
No 70
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.46 E-value=0.0018 Score=47.57 Aligned_cols=70 Identities=23% Similarity=0.188 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhHH-HHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeee
Q 022191 51 VIPIGAMFAMTLWLGNTAYLYISVAFA-QMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 120 (301)
Q Consensus 51 ~~~~~~~~~~~~~~~~~al~~~~~~~~-~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~ 120 (301)
.+...+++..++.+.-.|++++|.+.+ .+-.....+.+.+.++++++|+++..+++++.+.++|++.+..
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 555667778888899999999999884 5566789999999999999999999999999999999986543
No 71
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.36 E-value=0.0014 Score=51.84 Aligned_cols=73 Identities=14% Similarity=0.029 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheee
Q 022191 46 IYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
+....++..+++....+...+..++++++-..+++.....+.+.+++.++++|+++..++.|+++++.|+.+-
T Consensus 79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 4455566777778888999999999999999999999999999999999999999999999999999998753
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.36 E-value=0.0039 Score=47.24 Aligned_cols=58 Identities=17% Similarity=0.318 Sum_probs=45.7
Q ss_pred HHHHHHhcchhH-HHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 214 VFLVISHTSALT-IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 214 ~~~~i~~~~a~~-~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
...++++.+... +++..-+..+.+.++|+++|||+ +++.+++|++++++|+...+...
T Consensus 47 ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~-~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 47 LSFAVKKIALGVAYALWEGIGILFITLFSVLLFDES-LSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHhhcCC
Confidence 445566655433 34445678889999999999999 99999999999999999886544
No 73
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.35 E-value=0.0077 Score=44.84 Aligned_cols=68 Identities=13% Similarity=-0.028 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhHHH-HHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheee
Q 022191 51 VIPIGAMFAMTLWLGNTAYLYISVAFAQ-MLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 51 ~~~~~~~~~~~~~~~~~al~~~~~~~~~-vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
......++...+.+...+++++|.+.+- +-.....+.+.+.+.+++||++++.|++++.+++.|++.+
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4455666777888899999999999854 5556889999999999999999999999999999999864
No 74
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.34 E-value=0.0063 Score=45.00 Aligned_cols=69 Identities=22% Similarity=0.124 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhHHH-HHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeee
Q 022191 51 VIPIGAMFAMTLWLGNTAYLYISVAFAQ-MLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 119 (301)
Q Consensus 51 ~~~~~~~~~~~~~~~~~al~~~~~~~~~-vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~ 119 (301)
.+....++..++.+...+++.+|.+.+- +-.....+.+.+.+.+++||++++.+++++.+++.|++.+.
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3445677788888999999999999855 44558999999999999999999999999999999998764
No 75
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.17 E-value=0.014 Score=43.44 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=44.6
Q ss_pred HHHHHHhcch-hHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 214 VFLVISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 214 ~~~~i~~~~a-~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
...++|+.+. +.+++..-+..+.+.+.|+++|||+ +++.+++|+++++.|+...+
T Consensus 52 Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~-~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 52 LSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQR-LNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHhc
Confidence 3344666554 3456677788899999999999999 99999999999999998754
No 76
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.08 E-value=0.0029 Score=54.39 Aligned_cols=77 Identities=23% Similarity=0.206 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchh
Q 022191 198 LMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~ 275 (301)
......+++....|...+.++++.+|.+.-++...+.+.+.++++++++.+ ++..||++..+...|+.+........
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~-ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRR-LSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcc-cchhhHHHHHHHHHHHheeecCCccc
Confidence 334555666667778888999999999999999999999999999999999 99999999999999999987665443
No 77
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.05 E-value=0.0083 Score=53.94 Aligned_cols=138 Identities=12% Similarity=-0.003 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHH--HHHHH--HHhhccccccccccCc-chhHHHH
Q 022191 127 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSAL--CLFIP--WIFLEKPKMDALETWH-FPPLMLT 201 (301)
Q Consensus 127 ~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~~~~~~~~-~~~~~~~ 201 (301)
..|+++.+++++|++.+.+-+|+ .| ..+++.. |- ..+.+ .+.|. ..+..+.......... ..+...+
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k-----~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VK-----KWSWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF 77 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cC-----CCchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence 57999999999999999988877 33 2444444 43 11111 11121 1122211111112122 2234455
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHhh-hhhhHHHHHhHHhhcCCccc---c----hhhhHHHHHHHHHHHHhhhhhc
Q 022191 202 LNCLCTFALNLSVFLVISHTSALTIRVAG-VVKDWVVVLFSALLFADTKL---T----IINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 202 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~-~l~~v~~~~~~~~~fge~~~---t----~~~iiG~~lil~g~~~~~~~~~ 273 (301)
++|++-...++.....+++.+-......+ -+.-+.+.+++.+++||- . + ...++|.+++++|+.+..+...
T Consensus 78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew-~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNF-DVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccc-ccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 66666666788888888887766554443 456688999999999975 3 2 2368899999999999887443
No 78
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.05 E-value=0.0063 Score=45.47 Aligned_cols=58 Identities=17% Similarity=0.133 Sum_probs=45.1
Q ss_pred HHHHHHhcchh-HHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 214 VFLVISHTSAL-TIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 214 ~~~~i~~~~a~-~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
...++++.+.. .+++..-+..+.+.++|+++|||+ +++.+++|++++++|+...+...
T Consensus 47 l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~-~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 47 LAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhcCC
Confidence 33446665543 344455577888999999999999 99999999999999999986443
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.02 E-value=0.013 Score=43.40 Aligned_cols=55 Identities=9% Similarity=0.121 Sum_probs=45.3
Q ss_pred HHHHHhcch-hHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 215 FLVISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 215 ~~~i~~~~a-~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
..++|+.+. +.+++..-+..+.+.+.|+++|||+ +++.+++|+.++++|+...+.
T Consensus 47 s~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~-~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 47 AWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGES-ASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHhhhc
Confidence 344566543 4567777788899999999999999 999999999999999988753
No 80
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.97 E-value=0.0093 Score=43.16 Aligned_cols=60 Identities=18% Similarity=0.159 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHhhhhhhcchhhHHH-HHHHHHHHHHHHHHHHHcccccchhHHHHHHHH
Q 022191 52 IPIGAMFAMTLWLGNTAYLYISVAFAQ-MLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVI 111 (301)
Q Consensus 52 ~~~~~~~~~~~~~~~~al~~~~~~~~~-vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~ 111 (301)
.....+++.+..+...++++.|.+.+- +......+.+.+.+.+++||+++..|++++.++
T Consensus 33 ~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 33 ILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp -HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 334457888889999999999999974 455699999999999999999999999998764
No 81
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.93 E-value=0.0078 Score=53.39 Aligned_cols=119 Identities=13% Similarity=0.125 Sum_probs=80.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHH
Q 022191 125 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNC 204 (301)
Q Consensus 125 ~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
+...|+++++.++++.+...+++|+-.+|.+. +...-- .. +.... ....|. .+.+ ..
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~--~~~~~~--~~--------~~~~l-------~~~~W~--~G~~-~~- 60 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR--GSLRAG--SG--------GRSYL-------RRPLWW--IGLL-LM- 60 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cccccc--ch--------hhHHH-------hhHHHH--HHHH-HH-
Confidence 34679999999999999999999997765532 100000 00 00000 000111 1111 11
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 205 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 205 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
..+ ....+.++...+++..+.++.+.-+.+.+++..+++|+ ++...++|.++++.|..+.-.
T Consensus 61 ~~g---~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~-~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 61 VLG---EILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEK-LTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred hcc---hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhccc-chHhHHhhHHHHHhhheeeEE
Confidence 112 23344557788899999999999999999999999999 999999999999999976543
No 82
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.90 E-value=0.024 Score=41.69 Aligned_cols=55 Identities=22% Similarity=0.351 Sum_probs=45.7
Q ss_pred HHHHhcch-hHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhh
Q 022191 216 LVISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 271 (301)
Q Consensus 216 ~~i~~~~a-~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~ 271 (301)
.++|+.+- +.+++..-...+.+.+.|+++|||+ +++.+++|+.++++|+...+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~-l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGES-LSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCc-CCHHHHHHHHHHHHHHHHhhhc
Confidence 44666553 4467777788899999999999999 9999999999999999887643
No 83
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.84 E-value=0.087 Score=41.37 Aligned_cols=139 Identities=14% Similarity=0.084 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHH
Q 022191 127 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLC 206 (301)
Q Consensus 127 ~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
....+..+.+.++-........++.+..+ +|..-.......+...+.......+...... ......++ ...+|++
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~---spl~As~isf~vGt~~L~~l~l~~~~~~~~a-~~~~~pwW-~~~GG~l 78 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG---SPLLASLISFLVGTVLLLILLLIKQGHPGLA-AVASAPWW-AWIGGLL 78 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-hccCCchH-HHHccch
Confidence 34567788888888888888888876432 5666666666666666666655544333222 11222222 2334455
Q ss_pred HHHHHHHHHHHHHhcchhHHHHhhhh-hhHHHHHhHHhhcC-Ccc--cchhhhHHHHHHHHHHHHhhh
Q 022191 207 TFALNLSVFLVISHTSALTIRVAGVV-KDWVVVLFSALLFA-DTK--LTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 207 ~~~~~~~~~~~i~~~~a~~~s~~~~l-~~v~~~~~~~~~fg-e~~--~t~~~iiG~~lil~g~~~~~~ 270 (301)
+..+-........+.++++.-.+... +-+.+++++.+=+. ++| ++...++|++++++|+.+...
T Consensus 79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 55554455666778777766655554 44566777766443 332 999999999999999666543
No 84
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.75 E-value=0.00042 Score=58.86 Aligned_cols=135 Identities=13% Similarity=0.138 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHH
Q 022191 128 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT 207 (301)
Q Consensus 128 ~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (301)
.|.++...+ ..+....+..++.... +|.++-..-.+.-..+..|..+....+ .-.+..-..+ +++=|+++
T Consensus 38 ~gl~l~~vs-~ff~~~~vv~t~~~e~-----~p~e~a~~r~l~~mlit~pcliy~~~~-v~gp~g~R~~---LiLRg~mG 107 (346)
T KOG4510|consen 38 LGLLLLTVS-YFFNSCMVVSTKVLEN-----DPMELASFRLLVRMLITYPCLIYYMQP-VIGPEGKRKW---LILRGFMG 107 (346)
T ss_pred cCceehhhH-HHHhhHHHhhhhhhcc-----ChhHhhhhhhhhehhhhheEEEEEeee-eecCCCcEEE---EEeehhhh
Confidence 477777776 5666666666666542 444444444333333332322211111 1011111111 22334555
Q ss_pred HHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 208 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 208 ~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
+...+.+|++.++.+-.-+.+.....|+++.++++.+++|+ .|....+|..+.+.|+.+..+...
T Consensus 108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~-~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEP-FTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCC-CcHHHHHHHHHhhheEEEEecCCc
Confidence 55555677888999999999999999999999999999999 999999999999999998875543
No 85
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.52 E-value=0.0097 Score=44.43 Aligned_cols=65 Identities=22% Similarity=0.066 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhhhhhhcchhhHHHHHH-HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheee
Q 022191 54 IGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 54 ~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
.-+++-.+...+++.+...+.|.+.-+. +++-+++++.++++.+|..+++.++|+.++++|+.+-
T Consensus 47 pf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 47 PFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 3445566778889999999999999885 8899999999999999999999999999999999863
No 86
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.39 E-value=0.011 Score=50.87 Aligned_cols=133 Identities=14% Similarity=0.065 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHH
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 208 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (301)
|++-+++|+++++...+=.|+.- .-|+.-.+.+++....+.........+.+. +. -+.+++|.+-.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-----~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~--------f~-p~amlgG~lW~ 66 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-----TGDGFFFQWVMCSGIFLVGLVVNLILGFPP--------FY-PWAMLGGALWA 66 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-----CCCcHHHHHHHHHHHHHHHHHHHHhcCCCc--------ce-eHHHhhhhhhh
Confidence 56678888999988777666542 236655555554433333333333322221 11 12333444444
Q ss_pred HHHHHHHHHHHhcch-hHHHHhhhhhhHHHHHhHHh-hcCCcc----cchhhhHHHHHHHHHHHHhhhhhchh
Q 022191 209 ALNLSVFLVISHTSA-LTIRVAGVVKDWVVVLFSAL-LFADTK----LTIINLFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 209 ~~~~~~~~~i~~~~a-~~~s~~~~l~~v~~~~~~~~-~fge~~----~t~~~iiG~~lil~g~~~~~~~~~~~ 275 (301)
..|.+..-+++..+- .-..+.+..+-+.+...|-+ +||+++ -.+.+++|++++++|..++...|.+.
T Consensus 67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 445555555665543 23334444455666666644 676552 45669999999999999998766544
No 87
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.32 E-value=0.19 Score=44.90 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccc---c-cccc--ccCcc--hhHHHHH
Q 022191 131 VYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKP---K-MDAL--ETWHF--PPLMLTL 202 (301)
Q Consensus 131 ~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~-~~~~--~~~~~--~~~~~~~ 202 (301)
+..+...+..+......|.--++++.++.|.+..+..=..-.+......+..+.. . .... ..+.. ....+..
T Consensus 18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v 97 (345)
T KOG2234|consen 18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV 97 (345)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence 3344444555555555555544444566777777666555555444443333211 1 1111 11111 1233444
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 203 NCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 203 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
-+++...-|-..+.++.+.+|.+..+..+++...+.+++.++++++ ++..||...++...|+.+..
T Consensus 98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rk-Ls~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRK-LSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHh
Confidence 5555556666778889999999999999999999999999999999 99999999999999999887
No 88
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.27 E-value=0.02 Score=48.51 Aligned_cols=56 Identities=13% Similarity=0.034 Sum_probs=51.8
Q ss_pred HHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhe
Q 022191 61 TLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 116 (301)
Q Consensus 61 ~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~ 116 (301)
-..+...++.+.|...+.++.++.|.+.++.++++++|.+|..||+++..++.+..
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 46688889999999999999999999999999999999999999999998887665
No 89
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.23 E-value=0.034 Score=48.18 Aligned_cols=113 Identities=11% Similarity=0.085 Sum_probs=73.2
Q ss_pred CHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhh-hhhHHH
Q 022191 159 NPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGV-VKDWVV 237 (301)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~ 237 (301)
+|.+.+.-+..-+.+.. ....+..++.... ....+....++|+.-...+...+...++.+.+++...+. ++-+.+
T Consensus 11 ~~~~Q~lG~t~Gali~a-lv~~~~~~p~~~~---~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~ 86 (269)
T PF06800_consen 11 KPANQILGTTIGALIFA-LVVFLFRQPAFSM---SGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGT 86 (269)
T ss_pred cHHHHHHHHHHHHHHHH-HHHHHHhCCCcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHH
Confidence 55555554444333333 3333333333211 012234566677777777888888899888888877775 455678
Q ss_pred HHhHHhhcCCcccchhh----hHHHHHHHHHHHHhhhhhchhh
Q 022191 238 VLFSALLFADTKLTIIN----LFGYGIAIAGVAAYNNHKLKKE 276 (301)
Q Consensus 238 ~~~~~~~fge~~~t~~~----iiG~~lil~g~~~~~~~~~~~~ 276 (301)
.++++++|||- -+..+ +++.+++++|+.+.++.+++.+
T Consensus 87 sl~gv~~fgEW-~~~~~~~~G~~Al~liiiGv~lts~~~~~~~ 128 (269)
T PF06800_consen 87 SLIGVLFFGEW-TTTTQKIIGFLALVLIIIGVILTSYQDKKSD 128 (269)
T ss_pred HHHHHhhcCCC-CCcchHHHHHHHHHHHHHHHHHhcccccccc
Confidence 99999999998 66554 4577888999998887665443
No 90
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.95 E-value=0.09 Score=37.97 Aligned_cols=48 Identities=17% Similarity=0.220 Sum_probs=26.5
Q ss_pred HHHHHHHhcchhHH-HHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHH
Q 022191 213 SVFLVISHTSALTI-RVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIA 261 (301)
Q Consensus 213 ~~~~~i~~~~a~~~-s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~li 261 (301)
....++++.+...+ ++..-+..+...+.|.++|||+ +|+.+++|+.++
T Consensus 45 ~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~-~s~~~~~gi~lI 93 (93)
T PF00893_consen 45 FLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGES-LSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHhheeeC
Confidence 45556777766555 5566688899999999999999 999999999875
No 91
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.89 E-value=0.032 Score=46.80 Aligned_cols=132 Identities=12% Similarity=0.085 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCC---------CHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHH
Q 022191 137 VVGEALRLIFMEILVKRKGLKL---------NPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT 207 (301)
Q Consensus 137 ~~~~a~~~v~~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (301)
-+||=.|.+.|+|+.+.+ +.. -...+.+.++..-.+..=....+.+....+... .+.+. ..+...
T Consensus 22 fvCYF~yGI~QEkitrGk-Yg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~---~~~Ya--Acs~sY 95 (337)
T KOG1580|consen 22 FVCYFVYGIQQEKITRGK-YGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTP---TKMYA--ACSASY 95 (337)
T ss_pred hheehhhhhHHHHhhccc-cCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCc---chHHH--HHHHHH
Confidence 357888999999987632 121 123334444433332221111111111111111 11221 222333
Q ss_pred HHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchh
Q 022191 208 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 208 ~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~ 275 (301)
.+...+...+++..+=-+.-+-...+|+..+++|+++.+.. -+|.......+|++|+.++-+.++|.
T Consensus 96 LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~Ks-Y~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 96 LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKS-YHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred HHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhccc-ccHHHHHHHHHHHHHHHHhhcccccc
Confidence 34456677888998888888888999999999999999999 99999999999999999998876544
No 92
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.32 E-value=0.035 Score=46.96 Aligned_cols=67 Identities=10% Similarity=-0.012 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhee
Q 022191 51 VIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 117 (301)
Q Consensus 51 ~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l 117 (301)
.....++.+....+..+.++|.+.....+...+.++++.+++.++++|+++..+++|+.+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4444455666777888999999999999999999999999999999999999999999999998764
No 93
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.07 E-value=0.091 Score=47.14 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhch
Q 022191 200 LTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~ 274 (301)
...-|.+-+..++.+..++++++..-..++....-.+++.++..+-+|+ +|+...++..+.++|+++.+..+.+
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~-ft~sKllav~~si~GViiVt~~~s~ 235 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVER-FTLSKLLAVFVSIAGVIIVTMGDSK 235 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcch-hhHHHHHHHHHhhccEEEEEecccc
Confidence 4455677788888888999999999999999999999999999999999 9999999999999999998876543
No 94
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=93.97 E-value=0.027 Score=47.61 Aligned_cols=132 Identities=11% Similarity=0.052 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHH
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 208 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (301)
+++++++=++.|+.--....|. .-+|.+.+.-+. ++++......+++..|.. .+.. +..-+.+|..-.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~------GG~p~qQ~lGtT-~GALifaiiv~~~~~p~~----T~~~-~iv~~isG~~Ws 70 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF------GGKPYQQTLGTT-LGALIFAIIVFLFVSPEL----TLTI-FIVGFISGAFWS 70 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec------CCChhHhhhhcc-HHHHHHHHHHheeecCcc----chhh-HHHHHHhhhHhh
Confidence 5678889999999865554443 225555444443 344443333333322221 1111 233455555555
Q ss_pred HHHHHHHHHHHhcchhHHHHhhh-hhhHHHHHhHHhhcCCcccchhhh----HHHHHHHHHHHHhhhhhc
Q 022191 209 ALNLSVFLVISHTSALTIRVAGV-VKDWVVVLFSALLFADTKLTIINL----FGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 209 ~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~~~~~~fge~~~t~~~i----iG~~lil~g~~~~~~~~~ 273 (301)
+.+...+.+++..+.+.+...+. .+-+.+.++|++.|||- .+..++ +..++++.|+.+.++.++
T Consensus 71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW-~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEW-TTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEecc-CcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 66777888888888887777665 45678899999999999 887753 456777888888776554
No 95
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=93.63 E-value=0.96 Score=35.23 Aligned_cols=72 Identities=14% Similarity=0.057 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHH-HHHHHHHHHHHH----HcccccchhHHHHHHHHhhhhee
Q 022191 46 IYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKA-IMPVAVFILGVA----AGLEVMSCRMLLIMSVISFGVVV 117 (301)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~-~~pi~~~~~~~~----~~~e~~s~~~~~~~~~~~~Gv~l 117 (301)
+..++...++++......+..++....+++....+.- -+-+..++++.+ ..|+++++.|.+++.+.+.|+.+
T Consensus 62 ~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 62 SVPWWAYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred cCChHHhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3355677789999889999999999999888877765 566666777764 45788999999999999999864
No 96
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=93.53 E-value=2.2 Score=38.21 Aligned_cols=143 Identities=14% Similarity=0.052 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHH-HhHHHHHHHHHHHH-hhcccccccc-ccC-cchhHHHHH
Q 022191 127 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYY-VSPCSALCLFIPWI-FLEKPKMDAL-ETW-HFPPLMLTL 202 (301)
Q Consensus 127 ~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~~~~~~-~~~-~~~~~~~~~ 202 (301)
..|+++..+++++.+.+.+=.||.- .-.++.... +.+++-++ +|... ...-|+..+. ... ...++...+
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk------~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l 78 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVK------GWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTFL 78 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcC------CccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHHH
Confidence 5799999999999999888777652 244443333 33444433 34432 2233332211 111 111222222
Q ss_pred HHHHHHHHHHHHHHHHHhcc-hhHHHHhhhhhhHHHHHhHHhh-------cCCcccchhhhHHHHHHHHHHHHhhhhhch
Q 022191 203 NCLCTFALNLSVFLVISHTS-ALTIRVAGVVKDWVVVLFSALL-------FADTKLTIINLFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 203 ~~~~~~~~~~~~~~~i~~~~-a~~~s~~~~l~~v~~~~~~~~~-------fge~~~t~~~iiG~~lil~g~~~~~~~~~~ 274 (301)
.|++--...+.+=..+++.+ +...++..-+-.+++.++.-++ ++++ -....++|.+++++|+.+..+...+
T Consensus 79 ~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~-~g~~vL~Gv~v~LiGIai~g~AG~~ 157 (344)
T PF06379_consen 79 FGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATP-SGQIVLLGVAVCLIGIAICGKAGSM 157 (344)
T ss_pred HHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCC-CchhhhhHHHHHHHHHHHHhHHHHh
Confidence 22222222222222234433 2223333333333444443333 2233 3456899999999999998876554
Q ss_pred hhh
Q 022191 275 KEA 277 (301)
Q Consensus 275 ~~~ 277 (301)
+++
T Consensus 158 Ke~ 160 (344)
T PF06379_consen 158 KEK 160 (344)
T ss_pred hhh
Confidence 443
No 97
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.68 E-value=2.4 Score=37.22 Aligned_cols=130 Identities=12% Similarity=0.130 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHhhc----CCCC-CHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHHHHHH
Q 022191 140 EALRLIFMEILVKRK----GLKL-NPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSV 214 (301)
Q Consensus 140 ~a~~~v~~~~l~~~~----~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (301)
+-.+.|+|+++++|. +.+. ++.-+.+-+.+.+.+......-... ...... ..++-....++.......+.
T Consensus 26 ~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k-~~~~~~----apl~~y~~is~tn~~s~~~~ 100 (327)
T KOG1581|consen 26 FLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWK-KELSGV----APLYKYSLISFTNTLSSWCG 100 (327)
T ss_pred HHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccc-ccCCCC----CchhHHhHHHHHhhcchHHH
Confidence 335778899988642 1233 4555555555555554422221111 111111 11222333344455555557
Q ss_pred HHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchh
Q 022191 215 FLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 215 ~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~ 275 (301)
+-++|+.+=.+-.+....+-+..++++.++.+.+ .++...+-..++-.|+.++...+...
T Consensus 101 yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~k-y~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 101 YEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRK-YSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCc-cCcHHHHHHHHHHhheeeEEEecCCC
Confidence 7789999999999999999999999999999999 99999999999999999888765433
No 98
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=91.06 E-value=0.6 Score=34.92 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=40.9
Q ss_pred HHHHHHhcchhHHHHh-hhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHH
Q 022191 214 VFLVISHTSALTIRVA-GVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAA 267 (301)
Q Consensus 214 ~~~~i~~~~a~~~s~~-~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~ 267 (301)
++..+++.+-+.+... +.+.-+++.+.++++.+|. .+...++|+.+++.|+.+
T Consensus 58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~-~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEV-ISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcc-cchhHHHHHHHHHcCeee
Confidence 4455667665555555 5677788999998877777 899999999999999864
No 99
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=90.10 E-value=0.32 Score=39.82 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=54.9
Q ss_pred HHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhc
Q 022191 211 NLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 211 ~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
++.+..++++.+|+.++.....+..+..+++++++||+ +....++...+.+.|+....+...
T Consensus 67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~-~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDR-FMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccc-hhhhhHHHHHHHhCcEEEEEeccc
Confidence 55567779999999999999999999999999999999 999999999999999887765443
No 100
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.89 E-value=0.23 Score=43.71 Aligned_cols=122 Identities=15% Similarity=0.196 Sum_probs=79.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHH
Q 022191 124 NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLN 203 (301)
Q Consensus 124 ~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+++..|.++++.+++.-+...++.|+-.+|.+ ... +. -.+++. .....+. |+..++.
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~----~~~-~r---------------a~~gg~-~yl~~~~--Ww~G~lt 73 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAG----ASG-LR---------------AGEGGY-GYLKEPL--WWAGMLT 73 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHh----hhc-cc---------------ccCCCc-chhhhHH--HHHHHHH
Confidence 34567999999999999988888887666432 000 00 001110 0111111 2222222
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 204 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 204 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
-..+ ....+.+....+++-.+.++.+.-+.+.+++..+++|+ +++...+|.+++++|....-...
T Consensus 74 m~vG---ei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ek-l~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 74 MIVG---EIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEK-LNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHH---hHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHH-HHHhhhhheeEEecccEEEEEec
Confidence 2222 33344445677889999999999999999999999999 99999999999999986654433
No 101
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.76 E-value=21 Score=31.68 Aligned_cols=133 Identities=11% Similarity=0.028 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhh--ccccccccccCcchhHHHHHHHHHH
Q 022191 130 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFL--EKPKMDALETWHFPPLMLTLNCLCT 207 (301)
Q Consensus 130 ~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (301)
.+.++.-+++.-.-.+..|..+...+.+ ....++.+|++.+++.+...-... +.++.+......+... .++.
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~-~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~-----~~lf 87 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFP-MGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPV-----SLLF 87 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccH-----HHHH
Confidence 3444444445445556667666654321 333444577777776654443322 1121111111111111 1222
Q ss_pred HHHHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhh
Q 022191 208 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 208 ~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~ 269 (301)
+...+.....+++.+-....++..+.|+...+...++||.+ ++...+.....+++|...+.
T Consensus 88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~-~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKR-PSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcC-chhhHHHHHHHHHHHHHhhc
Confidence 22233344558899999999999999999999999999988 99999999988888876654
No 102
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=86.18 E-value=25 Score=31.65 Aligned_cols=222 Identities=13% Similarity=0.053 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHH-HHHHHHHHHHHHHHcc-------cccchhHHHHHHHHhhhheee
Q 022191 47 YTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGL-------EVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pi~~~~~~~~~~~-------e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
.+...+..+++.+.+...+-.+.+|+..+..+-+. .++..+-.++-.++.+ ++-....+++++++++|+.+.
T Consensus 72 ~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~ 151 (344)
T PF06379_consen 72 TLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAIC 151 (344)
T ss_pred HHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHH
Confidence 34557778888888888888999999888865443 4454555555444432 333457789999999999985
Q ss_pred eec----c-------ccch-HHHHHHHHHHHHHHHHHHHHHHHHH--hhc--CCCCCHHHHH--HHH-hHH-HHHHHHHH
Q 022191 119 SYG----E-------ININ-WIGVVYQMGGVVGEALRLIFMEILV--KRK--GLKLNPISVM--YYV-SPC-SALCLFIP 178 (301)
Q Consensus 119 ~~~----~-------~~~~-~~G~~l~l~a~~~~a~~~v~~~~l~--~~~--~~~~~~~~~~--~~~-~~~-~~~~l~~~ 178 (301)
... | .+++ ..|.++++.|.+..|+.+.-...-. ++. ....+|+-.. .|. ... +.+.-+..
T Consensus 152 g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~y 231 (344)
T PF06379_consen 152 GKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIY 231 (344)
T ss_pred hHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHH
Confidence 431 1 1223 3699999999998888765443210 000 0011111111 111 112 22222233
Q ss_pred HHhhcc--ccc---cccc----cCcchhHHHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHhhhhhhHHHHHhHHhhc
Q 022191 179 WIFLEK--PKM---DALE----TWHFPPLMLTLNCLCTFALNLSVFLVISHTS----ALTIRVAGVVKDWVVVLFSALLF 245 (301)
Q Consensus 179 ~~~~~~--~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----a~~~s~~~~l~~v~~~~~~~~~f 245 (301)
.+.... .+. .+.. .+........+.+..-+..+..+-+.-.+.+ ..--.+...+..+++-++|.. +
T Consensus 232 c~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-l 310 (344)
T PF06379_consen 232 CLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-L 310 (344)
T ss_pred HHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-H
Confidence 322211 111 0111 1112234455666666665555544444444 445556666677777777776 5
Q ss_pred CCcc-----cchhhhHHHHHHHHHHHHhh
Q 022191 246 ADTK-----LTIINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 246 ge~~-----~t~~~iiG~~lil~g~~~~~ 269 (301)
+|-| .-...++|+++++.++.+.-
T Consensus 311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 311 KEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred HHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 5543 33456888888888776653
No 103
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=85.43 E-value=0.82 Score=40.79 Aligned_cols=121 Identities=18% Similarity=0.186 Sum_probs=69.5
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 022191 143 RLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTS 222 (301)
Q Consensus 143 ~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 222 (301)
.+++.|+.+++.+.+ .|..++......+.........+...+...... ...+.-++--++............+++++
T Consensus 32 ~~~~nK~il~~~~f~-~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~--~~~~~~llpl~~~~~~~~v~~n~Sl~~v~ 108 (316)
T KOG1441|consen 32 VIILNKYILSKYGFP-FPITLTMLHLFCGALALLVIKVLKLVPPSKISS--KLPLRTLLPLGLVFCISHVLGNVSLSYVP 108 (316)
T ss_pred eEEeeHhhhccCCCC-CccHHHHHHHHHHHHHHHHHHHhcCCCCCcccc--ccchHHHHHHHHHHHHHHHhcchhhhccc
Confidence 455567777643322 455556555555555443333332222211111 11112222233444444444556689999
Q ss_pred hhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHH
Q 022191 223 ALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAA 267 (301)
Q Consensus 223 a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~ 267 (301)
....-....+.|+++.+++.++.+|+ .+.....-+..+..|+.+
T Consensus 109 VsF~q~iKa~~P~~tvl~~~~~~~~~-~s~~~~lsL~piv~GV~i 152 (316)
T KOG1441|consen 109 VSFYQTIKALMPPFTVLLSVLLLGKT-YSSMTYLSLLPIVFGVAI 152 (316)
T ss_pred hhHHHHHHhhcchhHHHHHHHHhCCC-CcceEEEEEEEeeeeEEE
Confidence 99999999999999999999999999 877554444444444433
No 104
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=79.85 E-value=3.9 Score=30.03 Aligned_cols=44 Identities=20% Similarity=0.083 Sum_probs=37.0
Q ss_pred HHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 226 IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 226 ~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
.+..+-.-.+.++++++.+-|++ |+...++|..++++|+.+.-+
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~-Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVR-PDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcC-CChHHHHhHHHHHHhHHheEe
Confidence 34455566778999999999999 999999999999999987654
No 105
>PRK02237 hypothetical protein; Provisional
Probab=79.77 E-value=4.5 Score=29.78 Aligned_cols=44 Identities=16% Similarity=0.043 Sum_probs=36.7
Q ss_pred HHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 226 IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 226 ~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
.+..+-.-.+.++++++.+-|++ |+...++|.+++++|+.+...
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~-Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVR-PDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcC-CChhHHHhHHHHHHhHHHhee
Confidence 34455566778899999999999 999999999999999977643
No 106
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.68 E-value=17 Score=28.72 Aligned_cols=71 Identities=11% Similarity=-0.057 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHH-HHHHHHHHHHHHHHHc----ccccchhHHHHHHHHhhhheee
Q 022191 48 TTSVIPIGAMFAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAG----LEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl-~~~~pi~~~~~~~~~~----~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
+++...+|++.+..............++..+.+ ...+-+..+++..+=+ +++++..+++++++.++|+.+.
T Consensus 69 pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 69 PWWAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred chHHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 445666666666666666666666666555544 4566777777765433 4778999999999999996544
No 107
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=78.60 E-value=5.2 Score=33.68 Aligned_cols=67 Identities=7% Similarity=-0.083 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHh
Q 022191 46 IYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVIS 112 (301)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~ 112 (301)
|.+.+++..|++-.+-..+.-|.+.-++.+.++++..++-...++-+.+++.|+.++.+..++.+++
T Consensus 222 d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGf 288 (309)
T COG5070 222 DSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGF 288 (309)
T ss_pred HHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHH
Confidence 3355677778888888888999999999999999999988888888888888887777766665543
No 108
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=76.91 E-value=34 Score=30.08 Aligned_cols=56 Identities=20% Similarity=0.213 Sum_probs=45.2
Q ss_pred HHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 214 VFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 214 ~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
++..+..++++-.-+..-...++.-+++..+++.+ ++..||+|+..+..|+...-.
T Consensus 103 m~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~t-i~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 103 MYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRT-ITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcc-cchhhHHHHHHHHhhhheeee
Confidence 44445566666666666677889999999999999 999999999999999976643
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=72.65 E-value=6.1 Score=29.03 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeec
Q 022191 83 IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG 121 (301)
Q Consensus 83 ~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~ 121 (301)
...+...+..+.+.+++|++..+++..++++|+.++.+.
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456667778889999999999999999999999987654
No 110
>PRK02237 hypothetical protein; Provisional
Probab=70.63 E-value=6.9 Score=28.82 Aligned_cols=39 Identities=8% Similarity=-0.024 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeec
Q 022191 83 IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG 121 (301)
Q Consensus 83 ~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~ 121 (301)
...+...+..+.+.++||++..+++..++++|+.++.+.
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 455666677889999999999999999999999876543
No 111
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=69.22 E-value=6.5 Score=28.83 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=24.9
Q ss_pred HHhHHhhcCCcccchhhhHHHHHHHHHHHH
Q 022191 238 VLFSALLFADTKLTIINLFGYGIAIAGVAA 267 (301)
Q Consensus 238 ~~~~~~~fge~~~t~~~iiG~~lil~g~~~ 267 (301)
...++++++|+ +++.+..|.+++++++..
T Consensus 77 ~~Fsv~~l~E~-l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEP-LKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCC-ccHHHHHHHHHHHHhhhe
Confidence 45677899999 999999999999888754
No 112
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=65.97 E-value=13 Score=27.14 Aligned_cols=39 Identities=13% Similarity=-0.029 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeec
Q 022191 83 IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG 121 (301)
Q Consensus 83 ~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~ 121 (301)
...+...+..+++-+.++++..+.+..++++|+.++..+
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 345556667778889999999999999999999887654
No 113
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=63.34 E-value=58 Score=23.98 Aligned_cols=55 Identities=18% Similarity=0.078 Sum_probs=35.4
Q ss_pred HhhhhhhcchhhHHHHHHH-HHHHHHHHHHHHHcccccchhHHHHHHHHhhhheee
Q 022191 64 LGNTAYLYISVAFAQMLKA-IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 64 ~~~~al~~~~~~~~~vl~~-~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
.+=.+.+..+.+.-.+++= .+-..-+.++.+++||++++....|-++.++++.++
T Consensus 51 ANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 51 ANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred chhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3444444444444444443 233334566778999999999999999987776543
No 114
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=61.78 E-value=0.92 Score=38.86 Aligned_cols=62 Identities=19% Similarity=0.147 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 210 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 210 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
.|+....+.++++-+-...+.+-..+..++++|++++.+ -.+.++.|.+++++|+...-...
T Consensus 91 aNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktr-Yrlmki~gV~iCi~GvvmvV~sD 152 (336)
T KOG2766|consen 91 ANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTR-YRLMKISGVVICIVGVVMVVFSD 152 (336)
T ss_pred ccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHH-HhhheeeeEEeEecceEEEEEee
Confidence 344455667888888899999999999999999999999 99999999999999997665433
No 115
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=60.39 E-value=6.6 Score=34.64 Aligned_cols=70 Identities=11% Similarity=0.024 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHhhh-hhhHHHHHhHHhhcCCcccc--hhhhHHHHHHHHHHHHhh
Q 022191 198 LMLTLNCLCTFALNLSVFLVISHTSALTIRVAGV-VKDWVVVLFSALLFADTKLT--IINLFGYGIAIAGVAAYN 269 (301)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~-l~~v~~~~~~~~~fge~~~t--~~~iiG~~lil~g~~~~~ 269 (301)
...+.+|+.--+.|+...+++...+-..+-+++. +.-++++.+.++. .++ .+ ...+.|.+++++++++-.
T Consensus 73 ~~A~aGGvvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~-~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 73 LFAMAGGVVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPK-INRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HHHHHhhHhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCC-CCCceEEEccHHHHHHHHHHHH
Confidence 4455666666666777666665544333222221 1222334444332 333 44 246678888877776654
No 116
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=58.14 E-value=91 Score=30.10 Aligned_cols=50 Identities=8% Similarity=-0.191 Sum_probs=24.3
Q ss_pred HHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHh
Q 022191 218 ISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY 268 (301)
Q Consensus 218 i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~ 268 (301)
..|..+....+..-..|+-+.+.|.+.=.-. .+....++.+..+++..+.
T Consensus 341 ~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 341 RGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIA 390 (524)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHH
Confidence 4444455555555566677777776543323 3333333333333333333
No 117
>PF15471 TMEM171: Transmembrane protein family 171
Probab=57.58 E-value=8.8 Score=33.05 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=20.5
Q ss_pred cchhhhHHHHHHHHHHHHhhhhhchhh
Q 022191 250 LTIINLFGYGIAIAGVAAYNNHKLKKE 276 (301)
Q Consensus 250 ~t~~~iiG~~lil~g~~~~~~~~~~~~ 276 (301)
+-..|+.|-+++++|...+...+.|++
T Consensus 159 FLslQImGPlIVl~GLCFFVVAHvKKr 185 (319)
T PF15471_consen 159 FLSLQIMGPLIVLVGLCFFVVAHVKKR 185 (319)
T ss_pred eeehhhhhhHHHHHhhhhhheeeeeec
Confidence 345689999999999988876554433
No 118
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=56.83 E-value=1.1e+02 Score=25.25 Aligned_cols=25 Identities=28% Similarity=0.292 Sum_probs=17.9
Q ss_pred HHhHHhhcCCcccchhhhHHHHHHHH
Q 022191 238 VLFSALLFADTKLTIINLFGYGIAIA 263 (301)
Q Consensus 238 ~~~~~~~fge~~~t~~~iiG~~lil~ 263 (301)
-.+|..++++. .=+..++|..+.++
T Consensus 133 ~~iG~~L~t~y-~l~fe~~silLLvA 157 (198)
T PRK06638 133 KAIGILLFTDY-LLPFELASVLLLVA 157 (198)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 45577778888 77777888776654
No 119
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=55.93 E-value=40 Score=29.95 Aligned_cols=58 Identities=7% Similarity=0.042 Sum_probs=42.7
Q ss_pred HHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 214 VFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 214 ~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
..+.++++.-+-+.+.....+++..+.|..+-=|+ ++|....-..+|-+|+.+..++.
T Consensus 101 SN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk-~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 101 SNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEK-FRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred ccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhhheeEEEecc
Confidence 45556777777777777777888888888877788 88887777777777777665543
No 120
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=54.94 E-value=4 Score=35.44 Aligned_cols=111 Identities=9% Similarity=0.027 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhh-hcchhhHHHHHHHHHHHHHHHHHH-HHccccc-chhHHHHHHHHhhhheeeeeccc--cchHH
Q 022191 54 IGAMFAMTLWLGNTAY-LYISVAFAQMLKAIMPVAVFILGV-AAGLEVM-SCRMLLIMSVISFGVVVASYGEI--NINWI 128 (301)
Q Consensus 54 ~~~~~~~~~~~~~~al-~~~~~~~~~vl~~~~pi~~~~~~~-~~~~e~~-s~~~~~~~~~~~~Gv~l~~~~~~--~~~~~ 128 (301)
.+++...+..++++-+ +-.+-+-.+++.+...+.++++-. .++|+|+ -..-.++++++.+-..++..-.. +.-+.
T Consensus 28 ~~llll~ail~w~~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~ 107 (381)
T PF05297_consen 28 GLLLLLVAILVWFFIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFV 107 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 3333334444443322 223334445555555555444443 3345554 44555666665555554444332 22356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYV 167 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~~~~~~~~~~~~~~~~ 167 (301)
|+++.+++.+..-.-+.+ -.++++. .-+.++++.+.
T Consensus 108 Gi~~l~l~~lLaL~vW~Y-m~lLr~~--GAs~WtiLaFc 143 (381)
T PF05297_consen 108 GIVILFLCCLLALGVWFY-MWLLREL--GASFWTILAFC 143 (381)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHh--hhHHHHHHHHH
Confidence 876655544432222233 2344543 34666666554
No 121
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=50.23 E-value=19 Score=26.50 Aligned_cols=59 Identities=22% Similarity=0.163 Sum_probs=47.5
Q ss_pred HHHHHhhhhhhcchhhHHHHHH-HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheee
Q 022191 60 MTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 60 ~~~~~~~~al~~~~~~~~~vl~-~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
.+..+++..++..+.+.+.-+. +++-.|+++.+..+..|...+...++..+.++|+.+.
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 3456778888888888766544 5688899999988888888999999999999998753
No 122
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.83 E-value=29 Score=25.10 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=26.1
Q ss_pred HHhHHhhcCCcccchhhhHHHHHHHHHHHHh
Q 022191 238 VLFSALLFADTKLTIINLFGYGIAIAGVAAY 268 (301)
Q Consensus 238 ~~~~~~~fge~~~t~~~iiG~~lil~g~~~~ 268 (301)
...+++.++|+ +.+.++.|..++..|+...
T Consensus 84 v~Fsvfyl~ep-l~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEP-LRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCc-chHHHHHHHHHHHHHHHHh
Confidence 45688999999 9999999999999888654
No 123
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=44.60 E-value=26 Score=25.65 Aligned_cols=44 Identities=18% Similarity=0.043 Sum_probs=35.7
Q ss_pred HHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhh
Q 022191 226 IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 270 (301)
Q Consensus 226 ~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~ 270 (301)
.+..+-.-.+.++++.+++=|.+ ++...++|.+++++|+.+...
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~-pdr~D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVR-PDRYDWIGAAICLAGVAVILF 104 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcC-CcHHHhhhHHHHHhceeeeEe
Confidence 34455566778899999999999 999999999999999766543
No 124
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=44.51 E-value=24 Score=24.88 Aligned_cols=25 Identities=16% Similarity=0.267 Sum_probs=20.8
Q ss_pred cchhhhHHHHHHHHHHHHhhhhhch
Q 022191 250 LTIINLFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 250 ~t~~~iiG~~lil~g~~~~~~~~~~ 274 (301)
+++..++|+.++++|..+|.....+
T Consensus 5 ~~~~~iLgi~l~~~~~~Ly~lr~~~ 29 (84)
T PF07444_consen 5 FGPSYILGIILILGGLALYFLRFFR 29 (84)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7889999999999999999754443
No 125
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=43.80 E-value=2.2e+02 Score=24.71 Aligned_cols=71 Identities=11% Similarity=0.010 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHHH-HHHHHHHHHH-Hcc---cc--cchhHHHHHHHHhhhheeee
Q 022191 49 TSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIM-PVAVFILGVA-AGL---EV--MSCRMLLIMSVISFGVVVAS 119 (301)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~-pi~~~~~~~~-~~~---e~--~s~~~~~~~~~~~~Gv~l~~ 119 (301)
...+.+|.+++.++.+.....+.+..+....+-++. -+..-..+++ +++ |. -.+..+++++++++|..+..
T Consensus 56 p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 56 PWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred eHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 456788899999999999999999999999998874 4444444443 332 32 35678899999999888644
No 126
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=42.55 E-value=29 Score=23.15 Aligned_cols=24 Identities=29% Similarity=0.217 Sum_probs=17.2
Q ss_pred hhhhHHHHHHHHHHHHhhhhhchh
Q 022191 252 IINLFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 252 ~~~iiG~~lil~g~~~~~~~~~~~ 275 (301)
..-++++.++++|.++|....++.
T Consensus 4 d~iLi~ICVaii~lIlY~iYnr~~ 27 (68)
T PF05961_consen 4 DFILIIICVAIIGLILYGIYNRKK 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc
Confidence 345678888888999888665543
No 127
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=41.26 E-value=66 Score=25.16 Aligned_cols=26 Identities=19% Similarity=0.175 Sum_probs=15.2
Q ss_pred HhcchhHHHHhhhhhhHHHHHhHHhh
Q 022191 219 SHTSALTIRVAGVVKDWVVVLFSALL 244 (301)
Q Consensus 219 ~~~~a~~~s~~~~l~~v~~~~~~~~~ 244 (301)
..-+....+.+.|+.|.++++++.++
T Consensus 70 ~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 70 EEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666666666555554
No 128
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=38.77 E-value=3.3e+02 Score=25.36 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHHhhhhhchh
Q 022191 255 LFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 255 iiG~~lil~g~~~~~~~~~~~ 275 (301)
+.+..+++.|..+|...++|+
T Consensus 418 ~~~~~~~~~g~~~y~~~~~~~ 438 (445)
T PRK11357 418 ICAVIVIATGLPAYAFWAKRS 438 (445)
T ss_pred HHHHHHHHHhhhHHhheechh
Confidence 367888888988887655543
No 129
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=36.05 E-value=32 Score=26.11 Aligned_cols=6 Identities=17% Similarity=0.080 Sum_probs=0.0
Q ss_pred ccCCCC
Q 022191 293 TTTSST 298 (301)
Q Consensus 293 ~~~s~~ 298 (301)
+-.|.+
T Consensus 111 p~~~~~ 116 (122)
T PF01102_consen 111 PLSSVE 116 (122)
T ss_dssp ------
T ss_pred Ccceee
Confidence 333333
No 130
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=35.34 E-value=2.5e+02 Score=22.97 Aligned_cols=25 Identities=16% Similarity=0.333 Sum_probs=18.5
Q ss_pred HHhHHhhcCCcccchhhhHHHHHHHH
Q 022191 238 VLFSALLFADTKLTIINLFGYGIAIA 263 (301)
Q Consensus 238 ~~~~~~~fge~~~t~~~iiG~~lil~ 263 (301)
-.+|..++.|. .-+..+.|..+.++
T Consensus 132 ~~iG~~Lyt~Y-~l~fe~~s~lLLvA 156 (186)
T MTH00057 132 EVLGRVLYTDY-YYLFILASFILLVA 156 (186)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 45577788888 87778888877654
No 131
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=33.43 E-value=75 Score=24.31 Aligned_cols=24 Identities=17% Similarity=0.059 Sum_probs=14.0
Q ss_pred chhHHHHhhhhhhHHHHHhHHhhc
Q 022191 222 SALTIRVAGVVKDWVVVLFSALLF 245 (301)
Q Consensus 222 ~a~~~s~~~~l~~v~~~~~~~~~f 245 (301)
+....+.+.|+-|++.++.+.++.
T Consensus 66 ~~~~aa~l~Y~lPll~li~g~~l~ 89 (135)
T PF04246_consen 66 SLLKAAFLVYLLPLLALIAGAVLG 89 (135)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566666766666666544
No 132
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=33.11 E-value=23 Score=30.91 Aligned_cols=54 Identities=15% Similarity=0.082 Sum_probs=44.0
Q ss_pred HHHHHHhcchhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHh
Q 022191 214 VFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY 268 (301)
Q Consensus 214 ~~~~i~~~~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~ 268 (301)
...++++.+....-+-..+..++++++++++++++ -+..-+.|..+|+.|..+-
T Consensus 119 nnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqk-Ts~~~~~~C~lIi~GF~lG 172 (347)
T KOG1442|consen 119 NNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQK-TSFFALGCCLLIILGFGLG 172 (347)
T ss_pred cceehhhcceEEEEeccchhhhHHHHhHHhhcccc-cccccceeehhheehheec
Confidence 44557777776666667788899999999999999 8888888889988887664
No 133
>PF15102 TMEM154: TMEM154 protein family
Probab=32.55 E-value=37 Score=26.58 Aligned_cols=23 Identities=13% Similarity=-0.031 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHHHhhhhhchhhh
Q 022191 255 LFGYGIAIAGVAAYNNHKLKKEA 277 (301)
Q Consensus 255 iiG~~lil~g~~~~~~~~~~~~~ 277 (301)
+++.++++..++++.+.|+|+.+
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K 88 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTK 88 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccC
Confidence 55666666667777666555443
No 134
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=31.28 E-value=1.4e+02 Score=18.96 Aligned_cols=45 Identities=16% Similarity=0.199 Sum_probs=33.4
Q ss_pred HHHHHHHHhhhheeeeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022191 104 MLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKR 153 (301)
Q Consensus 104 ~~~~~~~~~~Gv~l~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~l~~~ 153 (301)
..++..+.++|+++...+.. |.+..+++-...|.+....|++.++
T Consensus 5 ~v~G~~lv~~Gii~~~lPGp-----G~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGP-----GLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCC-----cHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 46778888899998877652 6666777777788888778887764
No 135
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=31.24 E-value=31 Score=30.21 Aligned_cols=69 Identities=7% Similarity=0.027 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHhc-chhHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhhchhh
Q 022191 207 TFALNLSVFLVISHT-SALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKE 276 (301)
Q Consensus 207 ~~~~~~~~~~~i~~~-~a~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~~~~~ 276 (301)
.+..+....++.+.. +-.-.-++..-.++.++.+++++.|.+ -+..|+...+++-+|+++.+..+.+..
T Consensus 74 FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~-Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~ 143 (330)
T KOG1583|consen 74 FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKR-YSLRQYSSVLMITIGIIICTLFSSKDG 143 (330)
T ss_pred eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccce-eehhhhhhHHhhhhhheeEEeecCcch
Confidence 333455555555442 222334455667889999999999999 999999999999999999887665443
No 136
>PHA03049 IMV membrane protein; Provisional
Probab=30.81 E-value=58 Score=21.65 Aligned_cols=23 Identities=26% Similarity=0.254 Sum_probs=16.0
Q ss_pred hhhHHHHHHHHHHHHhhhhhchh
Q 022191 253 INLFGYGIAIAGVAAYNNHKLKK 275 (301)
Q Consensus 253 ~~iiG~~lil~g~~~~~~~~~~~ 275 (301)
..++++.++++|.++|....++.
T Consensus 5 ~~l~iICVaIi~lIvYgiYnkk~ 27 (68)
T PHA03049 5 IILVIICVVIIGLIVYGIYNKKT 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 45667777788888887655443
No 137
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=30.73 E-value=2.2e+02 Score=25.04 Aligned_cols=54 Identities=7% Similarity=0.106 Sum_probs=44.2
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheeeeecc
Q 022191 69 YLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE 122 (301)
Q Consensus 69 l~~~~~~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~~~~~ 122 (301)
.+.-++..+.++...---.+.+++++++.++++....-+.++.+.|+.+-..++
T Consensus 281 I~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 281 IKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 344566677777777778899999999999999999999999999999865544
No 138
>PF09964 DUF2198: Uncharacterized protein conserved in bacteria (DUF2198); InterPro: IPR019242 This family of various hypothetical archaeal proteins has no known function.
Probab=30.65 E-value=1.3e+02 Score=20.54 Aligned_cols=32 Identities=6% Similarity=0.076 Sum_probs=20.5
Q ss_pred cccccchhHHHHHHHHhhhheeeeeccccchH
Q 022191 96 GLEVMSCRMLLIMSVISFGVVVASYGEININW 127 (301)
Q Consensus 96 ~~e~~s~~~~~~~~~~~~Gv~l~~~~~~~~~~ 127 (301)
+-.|.+..+|+|.++.++=++-...+....++
T Consensus 16 lFtrVT~n~~vg~~lt~~Li~ASvykGyt~~~ 47 (74)
T PF09964_consen 16 LFTRVTYNHYVGTILTVALIAASVYKGYTHTW 47 (74)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhccccch
Confidence 35688999999998876544433445544443
No 139
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=29.23 E-value=4.7e+02 Score=24.31 Aligned_cols=40 Identities=5% Similarity=0.043 Sum_probs=18.6
Q ss_pred hhhHHHHHhHHhhcCCcccchhhhHHHHHHHHHHHHhhhhh
Q 022191 232 VKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 272 (301)
Q Consensus 232 l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~g~~~~~~~~ 272 (301)
.-++.+++...++.-.. -......+...++.|..+|...+
T Consensus 389 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~~ 428 (445)
T PRK10644 389 AVTLIAFVYCIWAVVGS-GAKEVMWSFVTLMVITAFYALNY 428 (445)
T ss_pred HHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555554443222 11223444444566666665443
No 140
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=28.83 E-value=59 Score=19.71 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=8.1
Q ss_pred cchhhhHHHHHHHHHHH
Q 022191 250 LTIINLFGYGIAIAGVA 266 (301)
Q Consensus 250 ~t~~~iiG~~lil~g~~ 266 (301)
++|...+=.++++.|++
T Consensus 2 p~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIF 18 (49)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 45554444444444443
No 141
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.79 E-value=87 Score=22.73 Aligned_cols=30 Identities=17% Similarity=-0.015 Sum_probs=24.4
Q ss_pred HHHHHHHcccccchhHHHHHHHHhhhheee
Q 022191 89 FILGVAAGLEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 89 ~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
..++.+.+||.+++..+.+-.++..|+.+.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 456778899999999999998888777543
No 142
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=28.66 E-value=5.3e+02 Score=24.68 Aligned_cols=15 Identities=7% Similarity=0.257 Sum_probs=8.2
Q ss_pred CHHHHHHHHhHHHHH
Q 022191 159 NPISVMYYVSPCSAL 173 (301)
Q Consensus 159 ~~~~~~~~~~~~~~~ 173 (301)
.|...+..+..++.+
T Consensus 330 ~P~~a~~~~~~i~~l 344 (507)
T TIGR00910 330 VPVPLVIIQGIITSI 344 (507)
T ss_pred CcHHHHHHHHHHHHH
Confidence 456555555555543
No 143
>PRK10655 potE putrescine transporter; Provisional
Probab=27.29 E-value=5e+02 Score=24.01 Aligned_cols=25 Identities=20% Similarity=0.212 Sum_probs=17.7
Q ss_pred hhhHHHHHHHHHHHHhhhhhchhhh
Q 022191 253 INLFGYGIAIAGVAAYNNHKLKKEA 277 (301)
Q Consensus 253 ~~iiG~~lil~g~~~~~~~~~~~~~ 277 (301)
....|..++++|..+|....+|+++
T Consensus 409 ~~~~~~~~~~~g~~~y~~~~~~~~~ 433 (438)
T PRK10655 409 AMLYGSIVTFLGWTLYGLISPRFEL 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4566888888999888765554443
No 144
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=26.19 E-value=84 Score=17.32 Aligned_cols=17 Identities=18% Similarity=0.145 Sum_probs=9.3
Q ss_pred cchhhhHHHHHHHHHHH
Q 022191 250 LTIINLFGYGIAIAGVA 266 (301)
Q Consensus 250 ~t~~~iiG~~lil~g~~ 266 (301)
-.+..++|.+++..+.+
T Consensus 10 ~~~~~~~G~~l~~~~~~ 26 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGL 26 (34)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 45566777744444333
No 145
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=25.71 E-value=1.4e+02 Score=23.57 Aligned_cols=16 Identities=6% Similarity=0.011 Sum_probs=6.9
Q ss_pred HHHhhhhhhHHHHHhH
Q 022191 226 IRVAGVVKDWVVVLFS 241 (301)
Q Consensus 226 ~s~~~~l~~v~~~~~~ 241 (301)
.+.+.|+-|++.++.+
T Consensus 77 aa~lvYllPLl~li~g 92 (154)
T PRK10862 77 SALLVYMTPLVGLFLG 92 (154)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3334444444444443
No 146
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=25.37 E-value=3.9e+02 Score=22.06 Aligned_cols=23 Identities=30% Similarity=0.314 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 022191 127 WIGVVYQMGGVVGEALRLIFMEI 149 (301)
Q Consensus 127 ~~G~~l~l~a~~~~a~~~v~~~~ 149 (301)
+.+....+++++.++.+..+.||
T Consensus 178 l~~~~~iiig~i~~~~~~~lkkk 200 (206)
T PF06570_consen 178 LPPWVYIIIGVIAFALRFYLKKK 200 (206)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 33566778888888886554443
No 147
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=25.31 E-value=4.6e+02 Score=24.97 Aligned_cols=24 Identities=13% Similarity=-0.068 Sum_probs=19.4
Q ss_pred cchhhhHHHHHHHHHHHHhhhhhc
Q 022191 250 LTIINLFGYGIAIAGVAAYNNHKL 273 (301)
Q Consensus 250 ~t~~~iiG~~lil~g~~~~~~~~~ 273 (301)
++..|++++.++++|++++.+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 788899999999999877765443
No 148
>PHA02898 virion envelope protein; Provisional
Probab=24.82 E-value=2.6e+02 Score=19.84 Aligned_cols=19 Identities=11% Similarity=0.294 Sum_probs=10.8
Q ss_pred hHHHHHHHHHHHHhhhhhch
Q 022191 255 LFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 255 iiG~~lil~g~~~~~~~~~~ 274 (301)
++|+++ +.|+.+++...++
T Consensus 53 Ilgivl-~lG~~ifs~y~r~ 71 (92)
T PHA02898 53 ILAIIL-ILGIIFFKGYNMF 71 (92)
T ss_pred HHHHHH-HHHHHHHHHHhhh
Confidence 444444 4677777755543
No 149
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=23.77 E-value=4.2e+02 Score=21.87 Aligned_cols=24 Identities=13% Similarity=0.146 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 022191 129 GVVYQMGGVVGEALRLIFMEILVK 152 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~~ 152 (301)
|+...++.++..++...+..+.+.
T Consensus 112 gi~tli~~~i~~G~~~~~~~~~i~ 135 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYFIFKYIY 135 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555544444444443333333333
No 150
>PF02355 SecD_SecF: Protein export membrane protein; InterPro: IPR022813 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone protein (SecB), an ATPase (SecA), an integral membrane complex (SecCY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. The chaperone protein SecB [] is a highly acidic homotetrameric protein that exists as a "dimer of dimers" in the bacterial cytoplasm. SecB maintains preproteins in an unfolded state after translation, and targets these to the peripheral membrane protein ATPase SecA for secretion []. Together with SecY and SecG, SecE forms a multimeric channel through which preproteins are translocated, using both proton motive forces and ATP-driven secretion. The latter is mediated by SecA. The structure of the Escherichia coli SecYEG assembly revealed a sandwich of two membranes interacting through the extensive cytoplasmic domains []. Each membrane is composed of dimers of SecYEG. The monomeric complex contains 15 transmembrane helices. The SecD and SecF equivalents of the Gram-positive bacterium Bacillus subtilis are jointly present in one polypeptide, denoted SecDF, that is required to maintain a high capacity for protein secretion. Unlike the SecD subunit of the pre-protein translocase of E. coli, SecDF of B. subtilis was not required for the release of a mature secretory protein from the membrane, indicating that SecDF is involved in earlier translocation steps []. Comparison with SecD and SecF proteins from other organisms revealed the presence of 10 conserved regions in SecDF, some of which appear to be important for SecDF function. Interestingly, the SecDF protein of B. subtilis has 12 putative transmembrane domains. Thus, SecDF does not only show sequence similarity but also structural similarity to secondary solute transporters []. This entry represents bacterial SecD and SecF protein export membrane proteins and their archaeal homologues []. It is found in association with PF07549 from PFAM SecD and SecF proteins are part of the multimeric protein export complex comprising SecA, D, E, F, G, Y, and YajC []. SecD and SecF are required to maintain a proton motive force []. ; PDB: 3AQP_A 2RRN_A 3AQO_B.
Probab=22.59 E-value=4.2e+02 Score=21.68 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=23.8
Q ss_pred HHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHHHH
Q 022191 226 IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIA 263 (301)
Q Consensus 226 ~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~lil~ 263 (301)
.++......++..+.-..++|-+ ++...+.|...+++
T Consensus 59 ~aii~l~~dv~i~l~~~~~~~~~-l~l~~iaall~~iG 95 (189)
T PF02355_consen 59 AAIIALIHDVLITLGIFSLFGIE-LTLPSIAALLTIIG 95 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-E-E-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCc-ccHHHHHHHHHHHH
Confidence 34444555555556566778888 99999999877654
No 151
>PRK09776 putative diguanylate cyclase; Provisional
Probab=21.81 E-value=9.4e+02 Score=25.24 Aligned_cols=23 Identities=9% Similarity=0.258 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 022191 129 GVVYQMGGVVGEALRLIFMEILV 151 (301)
Q Consensus 129 G~~l~l~a~~~~a~~~v~~~~l~ 151 (301)
...++++..+...+...+.++..
T Consensus 71 ~~~~~~~~~~~~~~~~~ll~~~~ 93 (1092)
T PRK09776 71 NLTWTTINLVEAVVGAVLLRKLL 93 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444444443333333444443
No 152
>COG2851 CitM H+/citrate symporter [Energy production and conversion]
Probab=21.07 E-value=85 Score=28.84 Aligned_cols=14 Identities=29% Similarity=0.494 Sum_probs=11.8
Q ss_pred cchhhhHHHHHHHH
Q 022191 250 LTIINLFGYGIAIA 263 (301)
Q Consensus 250 ~t~~~iiG~~lil~ 263 (301)
+-+.|++|.++++.
T Consensus 178 liP~~i~Gl~~vl~ 191 (433)
T COG2851 178 LIPIQIIGLVLVLA 191 (433)
T ss_pred hhHHHHHHHHHHHH
Confidence 66789999998877
No 153
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=21.03 E-value=1.7e+02 Score=25.36 Aligned_cols=14 Identities=7% Similarity=0.195 Sum_probs=6.5
Q ss_pred cccccccccccccC
Q 022191 282 SDDSQQTQLTATTT 295 (301)
Q Consensus 282 ~~~~~~~~~~~~~~ 295 (301)
++++++|..+++++
T Consensus 244 ~~~~~~~~~~~~~~ 257 (258)
T PRK10921 244 EEENDAEAESEKTE 257 (258)
T ss_pred cccchhhhcccccC
Confidence 33444455555544
No 154
>COG1971 Predicted membrane protein [Function unknown]
Probab=20.57 E-value=1.9e+02 Score=23.81 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=25.3
Q ss_pred hHHHHhhhhhhHHHHHhHHhhcCCcccchhhhHHHHHH-HHHH
Q 022191 224 LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIA-IAGV 265 (301)
Q Consensus 224 ~~~s~~~~l~~v~~~~~~~~~fge~~~t~~~iiG~~li-l~g~ 265 (301)
...+.+..+.|..+...+.++=+.. -.+.+|+|.++. +.|.
T Consensus 41 ~~fG~f~~i~pliG~~~g~~~s~~i-~~~~~wigf~lL~~lG~ 82 (190)
T COG1971 41 LIFGVFQAIMPLIGWFIGKFLSTFI-AEWAHWIGFVLLIILGL 82 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 3445555566777777777766555 566787776554 3455
No 155
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=20.20 E-value=7.3e+02 Score=23.31 Aligned_cols=22 Identities=18% Similarity=0.390 Sum_probs=16.1
Q ss_pred hhhHHHHHHHHHHHHhhhhhch
Q 022191 253 INLFGYGIAIAGVAAYNNHKLK 274 (301)
Q Consensus 253 ~~iiG~~lil~g~~~~~~~~~~ 274 (301)
....|.++...|..+|...+++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4567888889998888765543
No 156
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=20.01 E-value=9.5e+02 Score=24.56 Aligned_cols=44 Identities=9% Similarity=0.115 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhheee
Q 022191 75 AFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 118 (301)
Q Consensus 75 ~~~~vl~~~~pi~~~~~~~~~~~e~~s~~~~~~~~~~~~Gv~l~ 118 (301)
+-+.++..+.|+-.+.++.+...+|.+...+.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 34567778899999999988877776555566666666676643
Done!