Query 022192
Match_columns 301
No_of_seqs 169 out of 514
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 15:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022192.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022192hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ipb_A PHON protein, class A n 99.2 5.7E-11 2E-15 104.6 8.3 91 168-294 97-197 (230)
2 1d2t_A Acid phosphatase; all a 99.1 8.6E-11 3E-15 103.7 7.8 91 168-294 109-209 (231)
3 1qi9_A Protein (vanadium bromo 98.7 5.4E-08 1.8E-12 97.8 10.3 99 165-296 372-508 (556)
4 1up8_A Vanadium-dependent brom 98.0 1.7E-05 6E-10 80.5 9.2 72 193-297 480-576 (598)
5 3bb0_A Vanadium chloroperoxida 97.6 4.4E-05 1.5E-09 77.6 5.4 45 171-215 350-419 (609)
6 2lx0_A Membrane fusion protein 33.2 49 0.0017 21.6 3.5 12 273-284 2-13 (32)
7 2ifo_A Inovirus; helical virus 19.7 82 0.0028 22.2 2.9 23 274-296 19-41 (46)
8 2k1k_A Ephrin type-A receptor 14.8 1.1E+02 0.0039 20.3 2.5 13 278-290 11-23 (38)
9 3uqs_A RNA-dependent RNA polym 11.7 67 0.0023 31.7 1.0 15 191-205 293-307 (515)
10 3bso_A RNA dependent RNA polym 11.0 64 0.0022 31.4 0.6 14 192-205 294-307 (510)
No 1
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=99.16 E-value=5.7e-11 Score=104.57 Aligned_cols=91 Identities=20% Similarity=0.073 Sum_probs=68.8
Q ss_pred HHHHHhhhhhhhhccCccc----hhh-----hhccCCcCChhHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhcccc
Q 022192 168 MIAQSTKVFLNFFVERKWD----LRL-----LFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIG 238 (301)
Q Consensus 168 ~iAQllK~lI~~lr~rk~d----~~~-----~~~sGGMPSSHSA~V~ALATaIgL~~G~~S~iFalA~vfA~IVmYDA~G 238 (301)
++.+++|..++|-|+...+ +.. .-...+|||+|+++.+++++.+.+..+.. ....++++.+|+++
T Consensus 97 ~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~v~~S--- 170 (230)
T 2ipb_A 97 YATASAKKYYMRTRPFVLFNHSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPER---AQELARRGWEFGQS--- 170 (230)
T ss_dssp TTTHHHHHHHCCCCHHHHTTCCCSCGGGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHhCCCCcCccCCCCeeccCcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---
Confidence 6789999999988763211 111 12345999999999999999888775432 22345677888775
Q ss_pred hhhhhhhhHHHHHHHHHhhhcCCCCcccchhhhCC-CChhHHHHHHHHHHHHHHHHH
Q 022192 239 VRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLG-HTPSQVFAGAMLGILVACFCC 294 (301)
Q Consensus 239 VRR~aGkQA~vLN~L~~~~~~~~~~~~~~LKE~LG-HTP~EVlaGALLGIlVAli~~ 294 (301)
|.++| |+|.||++|+++|++++..++
T Consensus 171 ------------------------------Rv~~G~H~~sDVlaG~~lG~~~~~~~~ 197 (230)
T 2ipb_A 171 ------------------------------RVICGAHWQSDVDAGRYVGAVEFARLQ 197 (230)
T ss_dssp ------------------------------HHHHTSSCHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------HHhcCcccHHHHHHHHHHHHHHHHHHH
Confidence 88999 999999999999999987664
No 2
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=99.13 E-value=8.6e-11 Score=103.68 Aligned_cols=91 Identities=18% Similarity=0.088 Sum_probs=69.0
Q ss_pred HHHHHhhhhhhhhccCcc----chhhh-----hccCCcCChhHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhcccc
Q 022192 168 MIAQSTKVFLNFFVERKW----DLRLL-----FASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIG 238 (301)
Q Consensus 168 ~iAQllK~lI~~lr~rk~----d~~~~-----~~sGGMPSSHSA~V~ALATaIgL~~G~~S~iFalA~vfA~IVmYDA~G 238 (301)
++.+.+|..++|.|+... .+... -...+|||+|++..+++++.+++..+.. ....+.+|..|+++
T Consensus 109 ~~~~~lK~~~~r~RP~~~~~~~~~~p~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~v~~S--- 182 (231)
T 1d2t_A 109 LATRSAKDHYMRIRPFAFYGVSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQR---QNEILKRGYELGQS--- 182 (231)
T ss_dssp TTTHHHHHHHCCCCHHHHHTCCCSCC--CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHhCCCCcCccCCCCceecCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---
Confidence 677899999998876321 12111 1244999999999999999988875432 22346678888775
Q ss_pred hhhhhhhhHHHHHHHHHhhhcCCCCcccchhhhCC-CChhHHHHHHHHHHHHHHHHH
Q 022192 239 VRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLG-HTPSQVFAGAMLGILVACFCC 294 (301)
Q Consensus 239 VRR~aGkQA~vLN~L~~~~~~~~~~~~~~LKE~LG-HTP~EVlaGALLGIlVAli~~ 294 (301)
|.++| |+|.||++|+++|+.++..++
T Consensus 183 ------------------------------RvylGvH~psDVlaG~~lG~~~~~~~~ 209 (231)
T 1d2t_A 183 ------------------------------RVICGYHWQSDVDAARVVGSAVVATLH 209 (231)
T ss_dssp ------------------------------HHHHTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------HHhcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 89999 999999999999999988765
No 3
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2
Probab=98.69 E-value=5.4e-08 Score=97.85 Aligned_cols=99 Identities=17% Similarity=0.214 Sum_probs=70.4
Q ss_pred HHHHHHHHhhhhhhhhccC--ccchhhhhc---------cCCcCChhHHHHHHHHHHHHHHhccC-------Cc------
Q 022192 165 FAWMIAQSTKVFLNFFVER--KWDLRLLFA---------SGGMPSSHSALCTALTTSVALCHGVA-------DS------ 220 (301)
Q Consensus 165 iA~~iAQllK~lI~~lr~r--k~d~~~~~~---------sGGMPSSHSA~V~ALATaIgL~~G~~-------S~------ 220 (301)
.+|...|++|.++.+-|+- ..+|..++. ..+|||+||+..+++++.+....|.+ .+
T Consensus 372 ~~~~~~~lLK~l~~RpRP~~~~~~~~~Ll~~~~~~~tp~~~SFPSGHAt~A~A~A~vL~~l~g~~~~~~~~~~r~~~~~~ 451 (556)
T 1qi9_A 372 SLLENAELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDD 451 (556)
T ss_dssp HHHTCHHHHHHHHHHHHHHSGGGCCCCCCCBSSTTCSCSSCCSSCHHHHHHHHHHHHHHHHHCHHHHTSBCSSCEEECTT
T ss_pred hhhhhhhHHHhhhccCCCCCCccccceeeecccccCCCCCCCCChHHHHHHHHHHHHHHHHHhccccccccccccccccc
Confidence 3455568999999988863 233433332 33999999999999999998775411 10
Q ss_pred ----------hHHH---HHHHHHHHhhcccchhhhhhhhHHHHHHHHHhhhcCCCCcccchhhhCC-CChhHHHHHHHHH
Q 022192 221 ----------LFPV---CLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLG-HTPSQVFAGAMLG 286 (301)
Q Consensus 221 ----------iFal---A~vfA~IVmYDA~GVRR~aGkQA~vLN~L~~~~~~~~~~~~~~LKE~LG-HTP~EVlaGALLG 286 (301)
...+ ...+|..|.++ |.|+| |+|.||++|+++|
T Consensus 452 G~~r~~~~~~~l~~~~~l~~lA~lIg~S---------------------------------RVYlGVHYPSDVlaG~lLG 498 (556)
T 1qi9_A 452 GLKLIDFRGSCLTFEGEINKLAVNVAFG---------------------------------RQMLGIHYRFDGIQGLLLG 498 (556)
T ss_dssp SSSEEECCSSCCBHHHHHHHHHHHHHHH---------------------------------HHHTTSCCHHHHHHHHHHH
T ss_pred cccccccccceeehhhHHHHHHHHHHHH---------------------------------HHeeCccCHHHHHHHHHHH
Confidence 0111 23366677664 89999 9999999999999
Q ss_pred HHHHHHHHHH
Q 022192 287 ILVACFCCQS 296 (301)
Q Consensus 287 IlVAli~~~~ 296 (301)
..+|..+++-
T Consensus 499 ~~va~~vl~~ 508 (556)
T 1qi9_A 499 ETITVRTLHQ 508 (556)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887753
No 4
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A
Probab=97.97 E-value=1.7e-05 Score=80.47 Aligned_cols=72 Identities=17% Similarity=0.088 Sum_probs=53.5
Q ss_pred cCCcCChhHHHHHHHHHHHHHHhccCCc------------------------hHHHHHHHHHHHhhcccchhhhhhhhHH
Q 022192 193 SGGMPSSHSALCTALTTSVALCHGVADS------------------------LFPVCLGFSLIVMYDAIGVRRHAGMQAE 248 (301)
Q Consensus 193 sGGMPSSHSA~V~ALATaIgL~~G~~S~------------------------iFalA~vfA~IVmYDA~GVRR~aGkQA~ 248 (301)
..++||+||+..+|.|+.+....+.... +......+|..+.++
T Consensus 480 ~pSYPSGHAt~S~A~A~vL~~lf~~~~~~~~~~~~~~~G~~R~~p~~g~~ltv~~sl~~lA~eig~S------------- 546 (598)
T 1up8_A 480 HPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIG------------- 546 (598)
T ss_dssp SCSSSCHHHHHHHHHHHHHHHHBTTTCBCSCCEEECSSSSSEEECCCCSCCBHHHHHHHHHHHHHHH-------------
T ss_pred CCCCChHHHHHHHHHHHHHHHHhccccccccccccccCcccccccccccchhHHHHHHHHHHHHHHH-------------
Confidence 4499999999999999999988765321 011123344444332
Q ss_pred HHHHHHHhhhcCCCCcccchhhhCC-CChhHHHHHHHHHHHHHHHHHHHh
Q 022192 249 VLNMIVEDLFQGHPISQRKLKELLG-HTPSQVFAGAMLGILVACFCCQSC 297 (301)
Q Consensus 249 vLN~L~~~~~~~~~~~~~~LKE~LG-HTP~EVlaGALLGIlVAli~~~~~ 297 (301)
|.|+| |+|.||++|+++|..+|..+.+-.
T Consensus 547 --------------------RVYlGVHypSDVlAG~~LG~aVa~~vl~~~ 576 (598)
T 1up8_A 547 --------------------RNMAGVHYFSDQFESLLLGEQVAIGILEEQ 576 (598)
T ss_dssp --------------------HHHHTSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------hheeeeecHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999 999999999999999998776543
No 5
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A
Probab=97.62 E-value=4.4e-05 Score=77.61 Aligned_cols=45 Identities=20% Similarity=0.017 Sum_probs=33.7
Q ss_pred HHhhhhhhhhccC------------ccchhhhhc-------------cCCcCChhHHHHHHHHHHHHHHh
Q 022192 171 QSTKVFLNFFVER------------KWDLRLLFA-------------SGGMPSSHSALCTALTTSVALCH 215 (301)
Q Consensus 171 QllK~lI~~lr~r------------k~d~~~~~~-------------sGGMPSSHSA~V~ALATaIgL~~ 215 (301)
-..|..+.|+|+- ..+|..+.. ..++||+||+..+|.|+.+....
T Consensus 350 w~~K~~y~R~RP~taI~~~~~~~~~dp~w~~l~~~~~~~~~~~~tP~~pSYPSGHAt~s~A~A~vL~~~f 419 (609)
T 3bb0_A 350 WKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYY 419 (609)
T ss_dssp HHHHHHHCBCCHHHHHHTCCCTTTCCTTCCBCCBCCTTSSSCCBCCSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhcCCCcCchhhcccccccCCccchhhcccccccccccCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4589999998861 123444431 24899999999999999999988
No 6
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=33.20 E-value=49 Score=21.58 Aligned_cols=12 Identities=42% Similarity=0.473 Sum_probs=10.1
Q ss_pred CCChhHHHHHHH
Q 022192 273 GHTPSQVFAGAM 284 (301)
Q Consensus 273 GHTP~EVlaGAL 284 (301)
-||-.||++|.+
T Consensus 2 khtiweviaglv 13 (32)
T 2lx0_A 2 KHTIWEVIAGLV 13 (32)
T ss_dssp CSSSHHHHHHHH
T ss_pred cchHHHHHHHHH
Confidence 399999999954
No 7
>2ifo_A Inovirus; helical virus; NMR {Filamentous phage} SCOP: h.1.4.1
Probab=19.74 E-value=82 Score=22.20 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=20.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHH
Q 022192 274 HTPSQVFAGAMLGILVACFCCQS 296 (301)
Q Consensus 274 HTP~EVlaGALLGIlVAli~~~~ 296 (301)
-++.--+++++||+++++.+|+|
T Consensus 19 ~t~i~~IG~aVLgV~v~i~v~k~ 41 (46)
T 2ifo_A 19 AGPIAAIGGAVLTVMVGIKVYKW 41 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 56777889999999999999987
No 8
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=14.76 E-value=1.1e+02 Score=20.32 Aligned_cols=13 Identities=15% Similarity=0.488 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHH
Q 022192 278 QVFAGAMLGILVA 290 (301)
Q Consensus 278 EVlaGALLGIlVA 290 (301)
-.++|+++|.+++
T Consensus 11 GaIAGiVvG~v~g 23 (38)
T 2k1k_A 11 GEIVAVIFGLLLG 23 (38)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CceeeeehHHHHH
Confidence 4567777777654
No 9
>3uqs_A RNA-dependent RNA polymerase; transferase; 2.00A {Murine norovirus} PDB: 3ur0_A* 3upf_A* 3sfg_A* 3nah_A 3nai_A 3qid_A* 3sfu_A*
Probab=11.65 E-value=67 Score=31.67 Aligned_cols=15 Identities=20% Similarity=0.379 Sum_probs=12.3
Q ss_pred hccCCcCChhHHHHH
Q 022192 191 FASGGMPSSHSALCT 205 (301)
Q Consensus 191 ~~sGGMPSSHSA~V~ 205 (301)
...|||||+|..|+.
T Consensus 293 ~v~gG~PSG~p~Tsi 307 (515)
T 3uqs_A 293 VVEEGLPSGCPCTTQ 307 (515)
T ss_dssp EECSSCCCCSTHHHH
T ss_pred EEcCCccCCCcceee
Confidence 348899999998875
No 10
>3bso_A RNA dependent RNA polymerase; RNA-dependent RNA polymerase, viral replication, antiviral E inhibitor, helicase, hydrolase; HET: CTP; 1.74A {Norwalk virus} PDB: 3bsn_A* 3h5x_A* 3h5y_A* 1sh0_A 1sh2_A 1sh3_A 2b43_A
Probab=11.04 E-value=64 Score=31.41 Aligned_cols=14 Identities=21% Similarity=0.396 Sum_probs=11.8
Q ss_pred ccCCcCChhHHHHH
Q 022192 192 ASGGMPSSHSALCT 205 (301)
Q Consensus 192 ~sGGMPSSHSA~V~ 205 (301)
..|||||+|.+|+.
T Consensus 294 ~~~G~PSG~p~Tsi 307 (510)
T 3bso_A 294 INEGLPSGVPCTSQ 307 (510)
T ss_dssp ECSSCCTTSTTHHH
T ss_pred EeCcccCCCCeeec
Confidence 48899999998765
Done!