Query 022194
Match_columns 301
No_of_seqs 167 out of 2023
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 08:44:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022194.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022194hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK08861 cystathionine gamma-s 100.0 2E-45 4.3E-50 324.4 33.3 297 4-300 1-299 (388)
2 PLN02509 cystathionine beta-ly 100.0 1.3E-44 2.8E-49 324.1 31.3 298 3-300 81-378 (464)
3 COG0626 MetC Cystathionine bet 100.0 2.7E-44 5.7E-49 311.2 31.4 294 7-300 6-311 (396)
4 PRK08114 cystathionine beta-ly 100.0 8.5E-44 1.8E-48 312.7 31.7 294 6-300 3-309 (395)
5 PRK09028 cystathionine beta-ly 100.0 2.6E-43 5.6E-48 310.6 32.5 291 9-300 5-306 (394)
6 PRK05967 cystathionine beta-ly 100.0 1.8E-43 4E-48 310.9 31.1 291 9-300 13-309 (395)
7 PRK08045 cystathionine gamma-s 100.0 5.1E-43 1.1E-47 310.0 33.0 293 8-300 4-298 (386)
8 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 6.8E-44 1.5E-48 312.7 26.8 279 22-300 15-303 (386)
9 TIGR02080 O_succ_thio_ly O-suc 100.0 2.3E-42 5E-47 305.6 33.2 293 8-300 3-297 (382)
10 TIGR01324 cysta_beta_ly_B cyst 100.0 6E-42 1.3E-46 302.0 32.0 278 22-300 13-295 (377)
11 PRK07671 cystathionine beta-ly 100.0 9.5E-42 2.1E-46 301.4 33.3 291 10-300 4-295 (377)
12 PRK06176 cystathionine gamma-s 100.0 9.1E-42 2E-46 301.6 32.4 291 10-300 4-295 (380)
13 TIGR01329 cysta_beta_ly_E cyst 100.0 1.1E-41 2.3E-46 301.5 32.8 290 11-300 3-292 (378)
14 PRK08249 cystathionine gamma-s 100.0 9E-42 2E-46 303.2 31.8 295 5-300 5-309 (398)
15 PRK08776 cystathionine gamma-s 100.0 1.4E-41 2.9E-46 302.4 32.3 290 11-300 15-306 (405)
16 KOG0053 Cystathionine beta-lya 100.0 4.9E-42 1.1E-46 293.3 28.1 292 9-300 22-323 (409)
17 PRK07811 cystathionine gamma-s 100.0 4.2E-41 9.2E-46 298.6 33.5 292 9-300 13-307 (388)
18 PRK08574 cystathionine gamma-s 100.0 3.8E-41 8.3E-46 298.2 32.7 285 10-296 4-294 (385)
19 PRK07810 O-succinylhomoserine 100.0 2.2E-41 4.7E-46 301.2 31.2 291 10-300 17-316 (403)
20 PRK08064 cystathionine beta-ly 100.0 6.5E-41 1.4E-45 297.6 32.9 294 7-300 5-299 (390)
21 PRK08248 O-acetylhomoserine am 100.0 6E-41 1.3E-45 300.1 31.5 299 2-300 2-343 (431)
22 TIGR01328 met_gam_lyase methio 100.0 1.2E-40 2.5E-45 295.9 31.9 291 9-300 4-306 (391)
23 PRK07504 O-succinylhomoserine 100.0 2.1E-40 4.6E-45 294.8 32.6 293 8-300 10-311 (398)
24 PRK07050 cystathionine beta-ly 100.0 2.2E-40 4.7E-45 294.2 32.0 294 7-300 8-311 (394)
25 PRK06460 hypothetical protein; 100.0 3.1E-40 6.8E-45 291.9 32.3 287 9-300 3-290 (376)
26 PRK06702 O-acetylhomoserine am 100.0 2.2E-40 4.7E-45 294.3 30.5 293 8-300 6-340 (432)
27 PRK07503 methionine gamma-lyas 100.0 5.1E-40 1.1E-44 292.9 31.9 293 7-300 8-312 (403)
28 cd00614 CGS_like CGS_like: Cys 100.0 5.6E-40 1.2E-44 290.5 31.3 277 24-300 1-286 (369)
29 PRK08133 O-succinylhomoserine 100.0 6.4E-40 1.4E-44 291.3 30.7 291 9-300 7-306 (390)
30 PRK05939 hypothetical protein; 100.0 8E-40 1.7E-44 290.4 31.0 276 24-300 8-313 (397)
31 PRK07582 cystathionine gamma-l 100.0 2.2E-39 4.7E-44 285.7 32.3 288 9-300 4-293 (366)
32 PRK06234 methionine gamma-lyas 100.0 1.7E-39 3.7E-44 289.5 31.9 291 9-300 9-313 (400)
33 PRK07049 methionine gamma-lyas 100.0 1.8E-39 4E-44 290.7 32.0 293 7-300 16-342 (427)
34 PRK08134 O-acetylhomoserine am 100.0 2E-39 4.4E-44 290.1 32.1 300 1-300 1-343 (433)
35 TIGR01325 O_suc_HS_sulf O-succ 100.0 3.4E-39 7.3E-44 286.1 32.3 288 12-300 3-299 (380)
36 PRK06084 O-acetylhomoserine am 100.0 3.3E-39 7.2E-44 288.6 31.3 291 10-300 4-338 (425)
37 PRK07812 O-acetylhomoserine am 100.0 4E-39 8.7E-44 287.8 31.5 292 9-300 14-347 (436)
38 COG2873 MET17 O-acetylhomoseri 100.0 1.8E-39 4E-44 270.0 25.9 294 6-300 5-340 (426)
39 PRK06767 methionine gamma-lyas 100.0 1.2E-38 2.7E-43 283.0 31.7 290 5-300 2-301 (386)
40 PRK05994 O-acetylhomoserine am 100.0 1.2E-38 2.7E-43 285.6 31.7 294 7-300 6-342 (427)
41 PRK05613 O-acetylhomoserine am 100.0 1.4E-38 3.1E-43 284.4 30.5 292 9-300 14-352 (437)
42 PRK08247 cystathionine gamma-s 100.0 5.5E-38 1.2E-42 277.2 30.7 275 8-282 4-279 (366)
43 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 9.2E-38 2E-42 279.9 31.2 290 10-300 3-335 (418)
44 PRK07269 cystathionine gamma-s 100.0 2.1E-37 4.6E-42 272.1 31.1 274 8-283 6-280 (364)
45 PLN02242 methionine gamma-lyas 100.0 3.6E-37 7.8E-42 275.0 29.6 282 11-296 20-320 (418)
46 PRK06434 cystathionine gamma-l 100.0 8.5E-36 1.8E-40 262.3 29.6 283 8-300 8-301 (384)
47 PRK05968 hypothetical protein; 100.0 5.7E-35 1.2E-39 259.5 31.5 265 21-287 21-295 (389)
48 COG0436 Aspartate/tyrosine/aro 100.0 8.1E-29 1.7E-33 219.4 23.2 246 48-298 60-348 (393)
49 KOG0257 Kynurenine aminotransf 100.0 3.5E-27 7.5E-32 200.2 19.9 221 45-271 61-326 (420)
50 PRK06207 aspartate aminotransf 100.0 3.4E-26 7.4E-31 205.1 24.2 222 47-274 72-327 (405)
51 PRK07179 hypothetical protein; 99.9 2.7E-26 5.8E-31 206.2 20.9 255 7-271 50-322 (407)
52 PLN02187 rooty/superroot1 99.9 9.9E-26 2.1E-30 204.6 24.6 224 46-274 101-360 (462)
53 PRK07681 aspartate aminotransf 99.9 7.3E-26 1.6E-30 202.9 23.4 251 11-271 32-312 (399)
54 PRK05957 aspartate aminotransf 99.9 2E-25 4.3E-30 199.4 25.1 221 47-273 59-308 (389)
55 PRK06290 aspartate aminotransf 99.9 9.9E-26 2.1E-30 202.0 22.7 252 10-271 43-323 (410)
56 cd06454 KBL_like KBL_like; thi 99.9 3.9E-26 8.4E-31 201.3 19.6 248 11-271 1-273 (349)
57 TIGR01822 2am3keto_CoA 2-amino 99.9 5E-26 1.1E-30 203.8 19.9 251 11-271 38-312 (393)
58 COG0156 BioF 7-keto-8-aminopel 99.9 4.8E-26 1E-30 198.1 18.7 249 11-270 39-312 (388)
59 PRK07324 transaminase; Validat 99.9 2.4E-25 5.2E-30 197.6 23.4 221 46-275 55-299 (373)
60 PLN00175 aminotransferase fami 99.9 2.4E-25 5.2E-30 200.0 23.0 220 46-271 84-332 (413)
61 TIGR03540 DapC_direct LL-diami 99.9 3.1E-25 6.7E-30 197.9 23.5 219 47-271 61-310 (383)
62 PLN02368 alanine transaminase 99.9 5E-25 1.1E-29 196.5 24.5 224 46-274 100-380 (407)
63 PLN03227 serine palmitoyltrans 99.9 1E-25 2.2E-30 200.7 19.6 246 14-270 1-280 (392)
64 PRK07366 succinyldiaminopimela 99.9 3.2E-25 6.9E-30 198.1 21.8 251 11-271 30-312 (388)
65 PRK09276 LL-diaminopimelate am 99.9 7E-25 1.5E-29 195.8 23.2 219 47-271 63-312 (385)
66 PRK12414 putative aminotransfe 99.9 1.2E-24 2.5E-29 194.1 24.4 249 12-271 30-307 (384)
67 PLN02483 serine palmitoyltrans 99.9 3.1E-25 6.7E-30 202.3 20.6 253 8-271 97-388 (489)
68 PRK09147 succinyldiaminopimela 99.9 1E-24 2.2E-29 195.3 23.1 219 46-270 58-316 (396)
69 PRK05942 aspartate aminotransf 99.9 1E-24 2.2E-29 195.2 22.9 219 47-271 67-316 (394)
70 PLN00145 tyrosine/nicotianamin 99.9 2E-24 4.3E-29 194.8 24.5 222 48-275 89-347 (430)
71 PRK06348 aspartate aminotransf 99.9 1.2E-24 2.6E-29 194.1 22.8 221 47-273 60-309 (384)
72 PRK08068 transaminase; Reviewe 99.9 1.3E-24 2.8E-29 194.2 23.0 219 47-271 64-313 (389)
73 TIGR03537 DapC succinyldiamino 99.9 1.6E-24 3.5E-29 191.0 23.0 218 48-271 31-278 (350)
74 PLN02656 tyrosine transaminase 99.9 2.6E-24 5.6E-29 193.3 24.0 258 8-273 28-324 (409)
75 PRK06108 aspartate aminotransf 99.9 1.7E-24 3.7E-29 193.2 22.6 222 47-274 55-308 (382)
76 PRK08960 hypothetical protein; 99.9 2.7E-24 5.9E-29 192.1 23.6 219 47-271 63-308 (387)
77 PRK08361 aspartate aminotransf 99.9 2E-24 4.3E-29 193.2 21.6 222 47-274 64-315 (391)
78 PLN02450 1-aminocyclopropane-1 99.9 4.9E-24 1.1E-28 193.9 24.1 217 48-271 81-347 (468)
79 COG0520 csdA Selenocysteine ly 99.9 3.1E-24 6.8E-29 190.1 22.2 222 56-281 67-328 (405)
80 PRK05664 threonine-phosphate d 99.9 3.2E-24 6.8E-29 187.4 21.9 231 12-271 21-262 (330)
81 PRK06855 aminotransferase; Val 99.9 5.9E-24 1.3E-28 192.1 24.3 225 45-273 65-327 (433)
82 PRK08912 hypothetical protein; 99.9 3.8E-24 8.3E-29 191.1 22.9 250 11-271 26-305 (387)
83 PRK13355 bifunctional HTH-doma 99.9 4E-24 8.7E-29 197.2 23.5 254 11-274 146-436 (517)
84 PLN00143 tyrosine/nicotianamin 99.9 6.2E-24 1.4E-28 190.7 24.0 220 47-272 68-324 (409)
85 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.5E-24 3.2E-29 189.5 19.1 214 49-274 41-267 (330)
86 PRK15481 transcriptional regul 99.9 4.7E-24 1E-28 193.0 22.7 217 48-271 116-356 (431)
87 COG0079 HisC Histidinol-phosph 99.9 1.8E-24 3.9E-29 188.6 19.1 244 12-272 23-283 (356)
88 PRK07682 hypothetical protein; 99.9 4.7E-24 1E-28 190.0 22.2 219 47-271 51-299 (378)
89 TIGR03538 DapC_gpp succinyldia 99.9 5.4E-24 1.2E-28 190.5 22.4 249 11-271 28-316 (393)
90 COG1168 MalY Bifunctional PLP- 99.9 1.4E-23 3.1E-28 176.6 23.2 228 42-275 51-312 (388)
91 PRK05764 aspartate aminotransf 99.9 8.2E-24 1.8E-28 189.5 23.2 222 48-275 63-315 (393)
92 PTZ00377 alanine aminotransfer 99.9 6.6E-24 1.4E-28 194.3 23.0 224 47-275 109-389 (481)
93 PTZ00433 tyrosine aminotransfe 99.9 1.2E-23 2.5E-28 189.3 24.0 221 47-273 69-330 (412)
94 PRK09148 aminotransferase; Val 99.9 7.8E-24 1.7E-28 190.0 22.8 250 12-271 31-311 (405)
95 PLN02955 8-amino-7-oxononanoat 99.9 5.6E-24 1.2E-28 189.3 21.4 251 9-267 100-386 (476)
96 TIGR01821 5aminolev_synth 5-am 99.9 2.9E-24 6.3E-29 192.8 19.7 250 11-271 45-318 (402)
97 PRK06939 2-amino-3-ketobutyrat 99.9 3.8E-24 8.3E-29 191.9 20.5 249 11-271 42-316 (397)
98 PRK13392 5-aminolevulinate syn 99.9 2.7E-24 5.8E-29 193.5 19.0 251 11-271 46-319 (410)
99 TIGR01264 tyr_amTase_E tyrosin 99.9 1E-23 2.2E-28 189.3 22.5 222 47-274 67-322 (401)
100 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 4.3E-24 9.2E-29 190.5 19.9 261 7-276 14-304 (387)
101 PRK07309 aromatic amino acid a 99.9 2.1E-23 4.6E-28 186.4 24.4 218 48-271 62-310 (391)
102 PRK07777 aminotransferase; Val 99.9 1.3E-23 2.8E-28 187.7 23.0 219 47-271 55-305 (387)
103 PLN03026 histidinol-phosphate 99.9 3.2E-24 6.8E-29 190.8 18.8 245 11-274 52-313 (380)
104 TIGR00858 bioF 8-amino-7-oxono 99.9 6.9E-24 1.5E-28 187.7 20.9 251 11-271 16-288 (360)
105 PRK09082 methionine aminotrans 99.9 3.4E-24 7.3E-29 191.3 18.9 219 47-271 61-309 (386)
106 PRK06107 aspartate aminotransf 99.9 1.6E-23 3.4E-28 188.0 22.8 252 12-274 34-317 (402)
107 PRK07550 hypothetical protein; 99.9 2.5E-23 5.4E-28 185.8 23.8 221 47-273 61-311 (386)
108 PRK13393 5-aminolevulinate syn 99.9 1E-23 2.2E-28 189.4 21.0 250 11-271 45-318 (406)
109 PRK07590 L,L-diaminopimelate a 99.9 1.5E-23 3.2E-28 188.6 22.0 221 46-271 69-335 (409)
110 PRK03158 histidinol-phosphate 99.9 3E-24 6.5E-29 190.0 17.2 243 12-271 30-292 (359)
111 PRK09064 5-aminolevulinate syn 99.9 6.5E-24 1.4E-28 190.9 19.4 250 11-271 46-319 (407)
112 TIGR01825 gly_Cac_T_rel pyrido 99.9 9.6E-24 2.1E-28 188.6 20.4 251 11-271 33-304 (385)
113 PRK06959 putative threonine-ph 99.9 1.1E-23 2.4E-28 184.5 20.3 232 11-271 24-268 (339)
114 PRK08636 aspartate aminotransf 99.9 3.3E-23 7.1E-28 186.0 23.8 220 46-271 64-321 (403)
115 PRK07337 aminotransferase; Val 99.9 2.4E-23 5.2E-28 186.1 22.8 219 47-271 61-306 (388)
116 COG1167 ARO8 Transcriptional r 99.9 1.5E-23 3.3E-28 189.8 21.6 219 47-272 126-374 (459)
117 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.2E-23 4.9E-28 184.5 22.2 217 53-276 42-285 (361)
118 PRK14807 histidinol-phosphate 99.9 1.1E-23 2.3E-28 185.8 19.6 212 55-274 59-285 (351)
119 PLN02822 serine palmitoyltrans 99.9 1.1E-23 2.3E-28 191.8 20.2 250 11-273 109-389 (481)
120 PRK05839 hypothetical protein; 99.9 2.6E-23 5.6E-28 184.8 22.1 245 11-268 24-301 (374)
121 TIGR01265 tyr_nico_aTase tyros 99.9 5.7E-23 1.2E-27 184.4 24.3 221 48-274 68-324 (403)
122 PLN02231 alanine transaminase 99.9 4.6E-23 1E-27 189.3 23.6 226 46-275 161-441 (534)
123 PRK06425 histidinol-phosphate 99.9 1.8E-23 3.9E-28 182.9 20.0 209 51-271 36-262 (332)
124 PRK08056 threonine-phosphate d 99.9 1.4E-23 2.9E-28 185.5 19.3 247 11-274 20-286 (356)
125 PRK07683 aminotransferase A; V 99.9 6E-23 1.3E-27 183.3 23.3 219 47-271 59-306 (387)
126 PLN02376 1-aminocyclopropane-1 99.9 1.1E-22 2.3E-27 185.9 25.3 216 49-271 90-354 (496)
127 PRK10874 cysteine sulfinate de 99.9 3.5E-23 7.6E-28 185.8 21.7 216 57-276 65-320 (401)
128 PRK08175 aminotransferase; Val 99.9 4.5E-23 9.8E-28 184.6 22.3 220 46-271 60-310 (395)
129 PRK02731 histidinol-phosphate 99.9 1.2E-23 2.6E-28 186.7 17.8 244 11-271 32-295 (367)
130 PRK03317 histidinol-phosphate 99.9 9.1E-24 2E-28 187.5 17.0 216 48-271 61-298 (368)
131 PRK09265 aminotransferase AlaT 99.9 1.1E-22 2.4E-27 182.6 24.1 222 47-274 66-323 (404)
132 TIGR01141 hisC histidinol-phos 99.9 1.4E-23 2.9E-28 184.9 17.8 248 11-275 19-284 (346)
133 PF00155 Aminotran_1_2: Aminot 99.9 3.9E-24 8.4E-29 189.6 14.4 249 12-271 2-295 (363)
134 PRK01688 histidinol-phosphate 99.9 9.7E-24 2.1E-28 185.9 16.7 215 52-275 54-289 (351)
135 PLN02607 1-aminocyclopropane-1 99.9 7.2E-23 1.6E-27 184.9 22.3 217 49-271 91-354 (447)
136 PTZ00376 aspartate aminotransf 99.9 5.9E-23 1.3E-27 184.3 21.5 220 47-271 66-337 (404)
137 PRK07568 aspartate aminotransf 99.9 1.9E-22 4.1E-27 180.9 24.7 222 47-274 60-311 (397)
138 PRK08363 alanine aminotransfer 99.9 1.4E-22 3E-27 181.8 23.3 222 48-274 65-318 (398)
139 PRK01533 histidinol-phosphate 99.9 8.6E-24 1.9E-28 187.0 15.2 242 12-271 30-292 (366)
140 TIGR00474 selA seryl-tRNA(sec) 99.9 6E-23 1.3E-27 184.1 20.6 213 55-271 122-371 (454)
141 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 6.1E-23 1.3E-27 182.1 20.5 211 55-272 51-288 (370)
142 PRK07865 N-succinyldiaminopime 99.9 1.6E-22 3.6E-27 179.2 22.9 213 48-271 57-295 (364)
143 PRK06225 aspartate aminotransf 99.9 1.8E-22 3.8E-27 180.0 23.1 210 57-273 68-299 (380)
144 PRK06358 threonine-phosphate d 99.9 1.5E-22 3.3E-27 178.5 22.0 245 12-274 20-287 (354)
145 PRK00950 histidinol-phosphate 99.9 1.6E-23 3.5E-28 185.5 15.7 240 12-268 35-290 (361)
146 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.2E-22 2.7E-27 180.9 21.0 218 55-274 44-292 (376)
147 KOG0259 Tyrosine aminotransfer 99.9 1.9E-22 4E-27 169.0 20.4 230 41-275 91-356 (447)
148 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.1E-22 2.3E-27 178.0 20.0 230 19-270 26-272 (346)
149 PRK04870 histidinol-phosphate 99.9 3.7E-23 7.9E-28 182.8 17.2 249 10-274 25-290 (356)
150 PRK05958 8-amino-7-oxononanoat 99.9 1.5E-22 3.2E-27 180.9 21.2 252 10-271 38-310 (385)
151 PRK05166 histidinol-phosphate 99.9 1.1E-22 2.4E-27 180.7 20.0 207 58-271 74-302 (371)
152 TIGR03392 FeS_syn_CsdA cystein 99.9 1.8E-22 3.9E-27 181.0 21.4 215 57-275 62-316 (398)
153 PRK09257 aromatic amino acid a 99.9 1.9E-22 4.2E-27 180.6 21.5 220 47-271 63-332 (396)
154 PRK04781 histidinol-phosphate 99.9 1.5E-22 3.3E-27 179.1 20.6 216 52-275 56-296 (364)
155 TIGR03542 DAPAT_plant LL-diami 99.9 2.2E-22 4.7E-27 180.6 21.2 218 48-271 70-328 (402)
156 PRK09295 bifunctional cysteine 99.9 2.5E-22 5.5E-27 180.5 21.5 215 57-275 69-324 (406)
157 PRK09105 putative aminotransfe 99.9 1.7E-22 3.6E-27 179.1 19.6 207 55-271 78-302 (370)
158 PRK06836 aspartate aminotransf 99.9 8.7E-22 1.9E-26 176.2 24.2 219 47-271 67-319 (394)
159 PRK05937 8-amino-7-oxononanoat 99.9 1.1E-22 2.4E-27 180.4 18.2 251 10-270 3-283 (370)
160 PRK08153 histidinol-phosphate 99.9 2.2E-22 4.8E-27 178.5 19.9 207 57-271 69-293 (369)
161 TIGR01437 selA_rel uncharacter 99.9 2.1E-22 4.5E-27 177.8 19.4 217 56-277 46-288 (363)
162 PRK04635 histidinol-phosphate 99.9 9.8E-23 2.1E-27 179.9 16.9 211 54-274 59-289 (354)
163 PRK05387 histidinol-phosphate 99.9 4.3E-22 9.4E-27 175.9 20.4 205 57-271 62-283 (353)
164 PRK07392 threonine-phosphate d 99.9 3.9E-22 8.4E-27 176.5 20.1 245 11-274 22-289 (360)
165 TIGR03539 DapC_actino succinyl 99.9 1E-21 2.3E-26 173.5 22.7 245 9-271 19-289 (357)
166 PLN02855 Bifunctional selenocy 99.9 6.1E-22 1.3E-26 178.9 21.5 215 57-275 78-332 (424)
167 PRK03321 putative aminotransfe 99.9 1.2E-22 2.6E-27 179.3 16.4 208 56-271 58-286 (352)
168 PRK03967 histidinol-phosphate 99.9 2.9E-22 6.4E-27 175.6 17.9 204 57-271 57-274 (337)
169 cd06453 SufS_like Cysteine des 99.9 1.2E-21 2.6E-26 174.3 21.7 217 57-277 45-300 (373)
170 PLN02397 aspartate transaminas 99.9 1.6E-21 3.5E-26 175.6 22.7 220 47-271 85-355 (423)
171 PRK14809 histidinol-phosphate 99.9 3.4E-22 7.3E-27 176.7 17.9 242 11-270 30-291 (357)
172 PRK02610 histidinol-phosphate 99.9 7.1E-22 1.5E-26 175.6 19.8 219 48-274 62-307 (374)
173 TIGR01979 sufS cysteine desulf 99.9 9.2E-22 2E-26 176.8 20.6 215 57-275 64-318 (403)
174 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.4E-21 7.4E-26 170.6 23.6 210 54-272 30-272 (376)
175 cd06502 TA_like Low-specificit 99.9 4.4E-22 9.5E-27 174.8 17.7 244 15-272 1-268 (338)
176 cd00609 AAT_like Aspartate ami 99.9 2.5E-21 5.3E-26 170.5 22.4 213 57-274 42-281 (350)
177 PRK08354 putative aminotransfe 99.9 1E-21 2.2E-26 170.4 19.4 151 56-215 41-196 (311)
178 TIGR03588 PseC UDP-4-keto-6-de 99.9 4E-21 8.6E-26 171.2 23.4 212 54-275 28-282 (380)
179 PRK04311 selenocysteine syntha 99.9 7.2E-22 1.6E-26 177.6 18.5 213 55-272 127-377 (464)
180 cd00616 AHBA_syn 3-amino-5-hyd 99.9 4.6E-21 1E-25 169.2 23.1 212 54-275 17-255 (352)
181 cd00615 Orn_deC_like Ornithine 99.9 5.9E-22 1.3E-26 170.3 16.4 206 57-269 61-293 (294)
182 PLN02409 serine--glyoxylate am 99.9 2.1E-21 4.6E-26 173.9 20.5 211 56-271 43-292 (401)
183 PRK11658 UDP-4-amino-4-deoxy-L 99.9 4E-21 8.6E-26 170.8 22.0 209 54-272 32-275 (379)
184 COG1104 NifS Cysteine sulfinat 99.9 2.4E-21 5.1E-26 166.2 18.6 212 56-271 45-279 (386)
185 PLN02651 cysteine desulfurase 99.9 2.9E-21 6.3E-26 171.2 19.8 214 57-275 45-283 (364)
186 PRK14808 histidinol-phosphate 99.9 1.1E-21 2.3E-26 171.8 16.0 240 11-271 19-272 (335)
187 PRK02948 cysteine desulfurase; 99.9 3.3E-21 7.2E-26 171.9 19.5 212 57-272 45-277 (381)
188 PRK13034 serine hydroxymethylt 99.9 3.5E-21 7.5E-26 172.8 19.3 252 8-271 25-305 (416)
189 TIGR02006 IscS cysteine desulf 99.9 4.9E-21 1.1E-25 171.8 19.3 215 56-275 48-286 (402)
190 cd06451 AGAT_like Alanine-glyo 99.9 8.3E-21 1.8E-25 167.9 20.4 211 56-271 33-278 (356)
191 PLN02672 methionine S-methyltr 99.9 8.8E-21 1.9E-25 182.6 21.9 214 53-271 731-989 (1082)
192 PRK09440 avtA valine--pyruvate 99.9 1.6E-20 3.5E-25 169.4 22.0 220 47-271 68-324 (416)
193 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.2E-20 2.7E-25 169.2 21.2 159 57-219 62-233 (397)
194 TIGR03235 DNA_S_dndA cysteine 99.9 9.1E-21 2E-25 167.4 19.8 213 57-274 44-282 (353)
195 PRK09275 aspartate aminotransf 99.9 9.8E-21 2.1E-25 172.1 20.4 168 48-218 129-328 (527)
196 PF00266 Aminotran_5: Aminotra 99.9 8.4E-21 1.8E-25 168.7 19.4 216 56-275 44-298 (371)
197 COG0075 Serine-pyruvate aminot 99.9 2.6E-20 5.7E-25 160.9 21.4 211 56-270 39-283 (383)
198 PLN02721 threonine aldolase 99.9 1.7E-20 3.7E-25 165.7 20.8 215 55-274 40-280 (353)
199 COG0399 WecE Predicted pyridox 99.9 2.5E-20 5.4E-25 161.3 21.1 211 54-274 33-271 (374)
200 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 7.4E-20 1.6E-24 162.6 24.8 208 55-272 31-271 (375)
201 TIGR02326 transamin_PhnW 2-ami 99.9 2.2E-20 4.7E-25 165.6 20.9 211 56-271 36-283 (363)
202 TIGR03402 FeS_nifS cysteine de 99.9 1.3E-20 2.9E-25 167.9 19.5 215 57-275 44-279 (379)
203 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1.3E-20 2.8E-25 166.7 19.2 215 54-278 24-267 (363)
204 cd00378 SHMT Serine-glycine hy 99.9 4.3E-20 9.4E-25 165.9 22.6 206 60-271 70-298 (402)
205 PRK00011 glyA serine hydroxyme 99.9 2.7E-20 5.8E-25 167.9 21.2 205 61-271 77-302 (416)
206 PRK14012 cysteine desulfurase; 99.9 1.5E-20 3.2E-25 168.9 19.0 215 56-275 50-288 (404)
207 TIGR03403 nifS_epsilon cystein 99.9 1.3E-20 2.8E-25 168.2 18.3 215 59-277 46-284 (382)
208 PRK07908 hypothetical protein; 99.9 2E-20 4.4E-25 164.9 18.6 200 57-271 60-276 (349)
209 PRK13238 tnaA tryptophanase/L- 99.9 5.3E-20 1.1E-24 166.4 21.5 210 54-271 77-335 (460)
210 TIGR00707 argD acetylornithine 99.9 2.3E-20 5.1E-25 166.4 18.7 253 11-270 27-308 (379)
211 TIGR03801 asp_4_decarbox aspar 99.9 4.5E-20 9.7E-25 167.6 20.6 167 49-218 124-327 (521)
212 PRK08637 hypothetical protein; 99.9 1.9E-19 4.1E-24 160.8 24.3 223 45-271 36-312 (388)
213 PRK07505 hypothetical protein; 99.9 4.3E-20 9.4E-25 165.7 20.2 250 11-267 46-321 (402)
214 PRK03244 argD acetylornithine 99.9 1.8E-20 3.8E-25 168.2 17.6 254 11-271 43-322 (398)
215 KOG1360 5-aminolevulinate synt 99.9 5.7E-21 1.2E-25 160.9 13.3 243 19-271 178-446 (570)
216 PRK15407 lipopolysaccharide bi 99.9 1E-19 2.3E-24 163.8 22.2 209 55-273 63-330 (438)
217 PRK01278 argD acetylornithine 99.9 3E-20 6.6E-25 166.1 18.4 253 11-270 31-313 (389)
218 PRK13479 2-aminoethylphosphona 99.9 8.8E-20 1.9E-24 162.0 20.9 211 56-271 38-284 (368)
219 KOG0256 1-aminocyclopropane-1- 99.9 2E-19 4.3E-24 152.2 21.6 218 48-271 116-378 (471)
220 cd00613 GDC-P Glycine cleavage 99.9 6.8E-20 1.5E-24 164.5 20.0 164 53-218 61-241 (398)
221 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 2.2E-19 4.8E-24 158.7 21.8 212 55-271 31-278 (355)
222 PRK00854 rocD ornithine--oxo-a 99.8 1.4E-19 3.1E-24 162.5 20.2 214 54-271 82-327 (401)
223 KOG1549 Cysteine desulfurase N 99.8 2.2E-20 4.7E-25 161.0 14.0 158 56-217 86-257 (428)
224 cd00617 Tnase_like Tryptophana 99.8 4.9E-19 1.1E-23 158.1 22.6 211 53-271 51-310 (431)
225 PRK04073 rocD ornithine--oxo-a 99.8 1.2E-19 2.5E-24 162.6 18.6 255 11-271 40-326 (396)
226 PRK05093 argD bifunctional N-s 99.8 1.2E-19 2.6E-24 162.8 18.7 252 11-271 40-323 (403)
227 TIGR03246 arg_catab_astC succi 99.8 1.6E-19 3.4E-24 161.6 19.3 254 11-271 35-318 (397)
228 cd00610 OAT_like Acetyl ornith 99.8 7E-20 1.5E-24 165.1 16.9 253 11-271 36-332 (413)
229 KOG1359 Glycine C-acetyltransf 99.8 1.1E-20 2.5E-25 153.2 10.2 253 7-270 63-334 (417)
230 cd06450 DOPA_deC_like DOPA dec 99.8 3E-20 6.6E-25 163.6 13.1 193 57-275 40-271 (345)
231 PRK02936 argD acetylornithine 99.8 3.2E-19 6.9E-24 158.9 19.3 252 11-270 29-305 (377)
232 PRK02627 acetylornithine amino 99.8 2.7E-19 5.9E-24 160.4 17.6 253 11-270 39-320 (396)
233 PRK02769 histidine decarboxyla 99.8 5.6E-19 1.2E-23 156.0 19.2 218 57-282 67-321 (380)
234 cd01494 AAT_I Aspartate aminot 99.8 4.3E-19 9.4E-24 139.9 16.5 154 57-216 2-170 (170)
235 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 2.2E-19 4.7E-24 157.6 14.9 208 56-270 67-316 (417)
236 PRK10534 L-threonine aldolase; 99.8 7.8E-19 1.7E-23 153.9 18.0 211 53-271 32-266 (333)
237 PRK12381 bifunctional succinyl 99.8 7.4E-19 1.6E-23 157.7 17.9 253 11-271 39-322 (406)
238 TIGR03531 selenium_SpcS O-phos 99.8 4.8E-18 1.1E-22 151.5 21.7 209 57-271 107-344 (444)
239 PRK00451 glycine dehydrogenase 99.8 1.6E-18 3.4E-23 157.8 18.1 213 57-275 114-375 (447)
240 PRK13520 L-tyrosine decarboxyl 99.8 5.2E-18 1.1E-22 150.8 20.8 209 57-271 61-302 (371)
241 COG4992 ArgD Ornithine/acetylo 99.8 7.2E-19 1.6E-23 150.8 13.6 265 11-282 42-338 (404)
242 TIGR03812 tyr_de_CO2_Arch tyro 99.8 6E-18 1.3E-22 150.5 20.0 210 57-272 61-308 (373)
243 PRK04366 glycine dehydrogenase 99.8 4.1E-18 8.8E-23 155.6 18.6 161 53-218 110-292 (481)
244 PF06838 Met_gamma_lyase: Meth 99.8 1.4E-17 3E-22 140.2 19.6 216 55-271 54-296 (403)
245 PTZ00125 ornithine aminotransf 99.8 5.3E-18 1.1E-22 152.3 18.1 251 11-270 31-317 (400)
246 PLN03032 serine decarboxylase; 99.8 7.8E-18 1.7E-22 147.8 18.3 217 57-281 68-323 (374)
247 TIGR01814 kynureninase kynuren 99.8 1.6E-17 3.5E-22 149.3 19.3 149 66-216 80-247 (406)
248 PRK03715 argD acetylornithine 99.8 1.6E-17 3.6E-22 148.1 17.8 252 11-270 36-316 (395)
249 TIGR01788 Glu-decarb-GAD gluta 99.8 3E-17 6.4E-22 147.0 18.6 215 57-277 82-351 (431)
250 PLN02271 serine hydroxymethylt 99.8 1.6E-16 3.4E-21 142.8 21.3 230 53-294 188-472 (586)
251 PRK13580 serine hydroxymethylt 99.8 7.3E-17 1.6E-21 144.2 19.1 206 61-271 101-358 (493)
252 TIGR02618 tyr_phenol_ly tyrosi 99.8 2E-16 4.3E-21 139.5 20.7 211 53-271 69-328 (450)
253 PRK15029 arginine decarboxylas 99.8 4.3E-17 9.4E-22 153.0 17.3 210 57-273 207-466 (755)
254 PTZ00094 serine hydroxymethylt 99.7 2E-16 4.4E-21 143.7 20.6 205 60-271 85-322 (452)
255 COG1103 Archaea-specific pyrid 99.7 3.2E-16 7E-21 126.2 18.8 214 55-275 61-302 (382)
256 TIGR01885 Orn_aminotrans ornit 99.7 1.6E-16 3.4E-21 142.7 18.4 251 11-271 37-326 (401)
257 PLN02624 ornithine-delta-amino 99.7 1.3E-16 2.9E-21 145.3 17.7 254 11-270 75-363 (474)
258 PLN00144 acetylornithine trans 99.7 2.2E-16 4.8E-21 140.4 18.4 262 11-279 15-318 (382)
259 COG0112 GlyA Glycine/serine hy 99.7 2.1E-16 4.6E-21 134.1 16.6 211 53-271 66-303 (413)
260 COG0001 HemL Glutamate-1-semia 99.7 2.3E-16 5E-21 136.9 16.7 248 12-270 54-341 (432)
261 TIGR00713 hemL glutamate-1-sem 99.7 1.6E-16 3.5E-21 143.6 16.5 248 11-268 48-333 (423)
262 PRK04260 acetylornithine amino 99.7 3.1E-16 6.8E-21 139.6 18.1 251 11-269 29-302 (375)
263 PLN02414 glycine dehydrogenase 99.7 2.3E-16 5.1E-21 151.9 18.2 211 57-272 570-826 (993)
264 KOG0634 Aromatic amino acid am 99.7 1E-15 2.3E-20 130.8 19.9 193 72-270 125-371 (472)
265 PRK04612 argD acetylornithine 99.7 6.2E-16 1.4E-20 138.3 19.6 263 11-281 40-340 (408)
266 PLN03226 serine hydroxymethylt 99.7 2.5E-15 5.4E-20 136.4 22.3 215 53-274 74-335 (475)
267 PRK04013 argD acetylornithine/ 99.7 5.4E-16 1.2E-20 136.3 17.0 258 11-282 24-302 (364)
268 PRK08117 4-aminobutyrate amino 99.7 4.3E-16 9.4E-21 141.0 16.4 254 11-270 43-345 (433)
269 COG2008 GLY1 Threonine aldolas 99.7 1.3E-15 2.8E-20 128.4 17.8 220 51-276 30-276 (342)
270 KOG2862 Alanine-glyoxylate ami 99.7 1.5E-15 3.3E-20 124.6 17.3 209 57-270 52-300 (385)
271 COG0076 GadB Glutamate decarbo 99.7 9.1E-16 2E-20 137.9 17.3 220 57-282 103-372 (460)
272 PRK13578 ornithine decarboxyla 99.7 6.8E-16 1.5E-20 143.7 16.6 212 57-275 176-443 (720)
273 PRK13237 tyrosine phenol-lyase 99.7 8.5E-15 1.8E-19 129.7 22.3 211 53-271 76-335 (460)
274 PLN02724 Molybdenum cofactor s 99.7 2.1E-15 4.6E-20 145.6 20.2 161 56-219 79-279 (805)
275 TIGR03799 NOD_PanD_pyr putativ 99.7 1.6E-15 3.4E-20 138.7 17.9 181 94-280 210-428 (522)
276 PF00464 SHMT: Serine hydroxym 99.7 6.1E-15 1.3E-19 129.2 20.1 213 53-271 60-319 (399)
277 PRK00062 glutamate-1-semialdeh 99.7 1.7E-15 3.7E-20 136.7 17.2 251 11-270 50-337 (426)
278 KOG0633 Histidinol phosphate a 99.7 1.2E-15 2.7E-20 122.2 13.9 199 72-276 87-304 (375)
279 PRK08360 4-aminobutyrate amino 99.7 5.1E-15 1.1E-19 133.8 19.4 265 11-281 41-357 (443)
280 PRK05964 adenosylmethionine--8 99.7 3.5E-15 7.6E-20 134.7 18.1 256 11-271 42-346 (423)
281 KOG1368 Threonine aldolase [Am 99.7 2.2E-15 4.8E-20 123.0 14.7 215 55-274 56-297 (384)
282 PLN02263 serine decarboxylase 99.7 1.2E-14 2.5E-19 129.9 20.7 216 57-280 135-389 (470)
283 TIGR00700 GABAtrnsam 4-aminobu 99.7 4.2E-15 9.2E-20 134.0 17.5 265 11-281 33-350 (420)
284 PRK03080 phosphoserine aminotr 99.7 2.6E-15 5.6E-20 133.6 15.5 150 57-220 50-212 (378)
285 TIGR03372 putres_am_tran putre 99.7 6.7E-15 1.5E-19 132.4 18.2 265 11-282 75-382 (442)
286 PRK09792 4-aminobutyrate trans 99.7 4.4E-15 9.5E-20 133.7 16.8 263 11-279 40-349 (421)
287 PRK11522 putrescine--2-oxoglut 99.7 8.7E-15 1.9E-19 132.6 18.2 264 11-281 82-388 (459)
288 PLN02880 tyrosine decarboxylas 99.7 1.2E-14 2.7E-19 132.5 19.1 215 57-277 124-405 (490)
289 COG0160 GabT 4-aminobutyrate a 99.6 8.7E-15 1.9E-19 129.3 17.4 265 11-282 56-375 (447)
290 PRK07495 4-aminobutyrate amino 99.6 6.9E-15 1.5E-19 132.3 17.0 266 11-282 40-352 (425)
291 PRK08088 4-aminobutyrate amino 99.6 1.5E-14 3.3E-19 130.6 19.0 232 11-249 41-314 (425)
292 PRK06777 4-aminobutyrate amino 99.6 8.1E-15 1.7E-19 132.0 17.1 254 11-270 40-336 (421)
293 PRK08593 4-aminobutyrate amino 99.6 1.2E-14 2.6E-19 131.5 18.3 266 11-282 42-361 (445)
294 KOG1357 Serine palmitoyltransf 99.6 1.5E-15 3.2E-20 130.4 10.7 252 8-271 133-424 (519)
295 PF01212 Beta_elim_lyase: Beta 99.6 4.3E-16 9.3E-21 132.4 7.2 217 53-274 27-273 (290)
296 PLN02760 4-aminobutyrate:pyruv 99.6 1.9E-14 4E-19 131.7 18.2 264 11-280 89-419 (504)
297 PLN02590 probable tyrosine dec 99.6 3.1E-14 6.7E-19 130.2 19.6 218 57-280 172-456 (539)
298 TIGR00461 gcvP glycine dehydro 99.6 8.1E-15 1.8E-19 139.8 15.8 207 57-271 532-785 (939)
299 PRK07046 aminotransferase; Val 99.6 5.8E-14 1.2E-18 127.1 19.6 248 12-270 76-363 (453)
300 PF00202 Aminotran_3: Aminotra 99.6 2.9E-15 6.2E-20 131.1 10.7 263 11-282 16-331 (339)
301 PRK12389 glutamate-1-semialdeh 99.6 8.2E-14 1.8E-18 125.7 20.3 251 11-270 53-340 (428)
302 PRK06058 4-aminobutyrate amino 99.6 3.5E-14 7.7E-19 128.7 17.8 254 11-270 56-357 (443)
303 PF00282 Pyridoxal_deC: Pyrido 99.6 1.7E-14 3.8E-19 127.3 14.9 220 57-282 81-365 (373)
304 PRK15399 lysine decarboxylase 99.6 7.3E-14 1.6E-18 130.1 19.4 207 57-273 197-444 (713)
305 PRK06541 hypothetical protein; 99.6 4.2E-14 9.1E-19 128.4 17.2 253 11-271 52-365 (460)
306 TIGR02407 ectoine_ectB diamino 99.6 4.3E-14 9.4E-19 126.9 16.8 252 11-269 35-332 (412)
307 PLN02482 glutamate-1-semialdeh 99.6 3.4E-14 7.5E-19 128.9 15.9 250 11-270 99-386 (474)
308 TIGR01366 serC_3 phosphoserine 99.6 3.7E-14 8.1E-19 125.2 15.6 209 56-273 42-282 (361)
309 PRK09221 beta alanine--pyruvat 99.6 4.3E-14 9.3E-19 127.9 16.4 265 11-280 49-377 (445)
310 PRK06082 4-aminobutyrate amino 99.6 5.3E-14 1.1E-18 127.7 16.6 263 11-282 72-383 (459)
311 TIGR00709 dat 2,4-diaminobutyr 99.6 7.7E-14 1.7E-18 126.4 17.3 262 11-282 39-359 (442)
312 PRK05367 glycine dehydrogenase 99.6 7.3E-14 1.6E-18 135.3 18.0 209 57-271 544-793 (954)
313 PRK09264 diaminobutyrate--2-ox 99.6 5.3E-14 1.2E-18 126.9 16.0 253 11-270 39-337 (425)
314 PRK15400 lysine decarboxylase 99.6 4.2E-14 9.2E-19 131.7 15.5 208 57-273 197-444 (714)
315 PRK13360 omega amino acid--pyr 99.6 1.4E-13 3.1E-18 124.4 18.6 254 11-270 46-361 (442)
316 COG0403 GcvP Glycine cleavage 99.6 3.1E-13 6.8E-18 115.9 19.5 252 12-272 75-379 (450)
317 PRK12403 putative aminotransfe 99.6 1.4E-13 3E-18 125.1 18.5 264 11-282 54-382 (460)
318 PRK06918 4-aminobutyrate amino 99.6 1E-13 2.2E-18 126.1 17.1 253 11-269 54-356 (451)
319 PRK05639 4-aminobutyrate amino 99.6 1.1E-13 2.3E-18 125.6 17.1 251 11-270 53-359 (457)
320 COG4100 Cystathionine beta-lya 99.6 1.9E-13 4.1E-18 111.9 16.6 164 57-220 67-253 (416)
321 PF03841 SelA: L-seryl-tRNA se 99.6 5.6E-15 1.2E-19 126.0 7.6 210 57-271 49-296 (367)
322 PRK06105 aminotransferase; Pro 99.6 2.5E-13 5.3E-18 123.5 18.5 266 11-282 48-379 (460)
323 TIGR01364 serC_1 phosphoserine 99.6 1.3E-13 2.9E-18 120.9 16.1 203 57-274 39-273 (349)
324 PRK07678 aminotransferase; Val 99.6 2.6E-13 5.6E-18 123.1 18.4 260 11-278 47-370 (451)
325 PRK05965 hypothetical protein; 99.6 2.1E-13 4.6E-18 123.8 17.8 266 11-282 46-376 (459)
326 PRK06062 hypothetical protein; 99.6 2.6E-13 5.7E-18 123.0 18.1 266 11-282 53-372 (451)
327 PRK05630 adenosylmethionine--8 99.6 1.8E-13 4E-18 122.9 17.0 267 11-282 40-361 (422)
328 PRK07482 hypothetical protein; 99.6 2.4E-13 5.2E-18 123.6 17.8 265 11-281 50-381 (461)
329 PRK07986 adenosylmethionine--8 99.6 1.4E-13 3E-18 123.8 16.1 266 11-282 43-364 (428)
330 PRK00615 glutamate-1-semialdeh 99.6 1.5E-13 3.3E-18 123.6 16.2 249 11-270 53-341 (433)
331 PRK06943 adenosylmethionine--8 99.6 2.1E-13 4.5E-18 123.6 16.9 267 11-282 54-382 (453)
332 cd00611 PSAT_like Phosphoserin 99.6 9E-14 2E-18 122.7 14.1 203 57-274 46-281 (355)
333 PRK05769 4-aminobutyrate amino 99.5 4.4E-13 9.5E-18 121.3 18.7 251 11-270 54-357 (441)
334 PRK05367 glycine dehydrogenase 99.5 9.4E-14 2E-18 134.6 14.5 187 19-218 82-287 (954)
335 PRK06938 diaminobutyrate--2-ox 99.5 2.3E-13 5E-18 123.6 16.0 265 11-282 63-384 (464)
336 COG1982 LdcC Arginine/lysine/o 99.5 3E-13 6.5E-18 121.4 16.2 154 57-217 72-247 (557)
337 PRK06173 adenosylmethionine--8 99.5 2.7E-13 5.9E-18 122.0 16.1 252 11-270 44-351 (429)
338 PRK12566 glycine dehydrogenase 99.5 2.5E-13 5.5E-18 129.1 16.2 149 55-207 543-711 (954)
339 PLN02414 glycine dehydrogenase 99.5 5.2E-13 1.1E-17 129.1 18.4 193 13-219 104-316 (993)
340 PRK07030 adenosylmethionine--8 99.5 5.5E-13 1.2E-17 121.2 17.2 266 11-281 47-375 (466)
341 PRK07481 hypothetical protein; 99.5 9.1E-13 2E-17 119.5 18.3 266 11-281 42-374 (449)
342 PRK05355 3-phosphoserine/phosp 99.5 2.9E-13 6.4E-18 119.4 14.5 202 57-272 50-282 (360)
343 PRK07483 hypothetical protein; 99.5 4.6E-13 1E-17 121.1 16.0 266 11-282 30-359 (443)
344 PRK08742 adenosylmethionine--8 99.5 9.3E-13 2E-17 119.7 17.8 267 11-282 64-397 (472)
345 PRK06917 hypothetical protein; 99.5 2E-12 4.4E-17 117.1 18.7 264 11-281 31-358 (447)
346 COG3977 Alanine-alpha-ketoisov 99.5 3.6E-12 7.9E-17 104.5 18.1 180 57-245 80-294 (417)
347 PRK06149 hypothetical protein; 99.5 1.1E-12 2.4E-17 129.2 18.2 264 11-282 585-900 (972)
348 PRK07480 putative aminotransfe 99.5 1.6E-12 3.5E-17 117.9 17.5 267 11-282 50-378 (456)
349 PRK06916 adenosylmethionine--8 99.5 6.1E-13 1.3E-17 120.9 14.5 267 11-282 56-385 (460)
350 COG3844 Kynureninase [Amino ac 99.5 2.1E-12 4.5E-17 107.1 16.1 214 57-271 78-325 (407)
351 TIGR01365 serC_2 phosphoserine 99.5 1.2E-12 2.7E-17 115.1 15.7 202 57-272 41-283 (374)
352 PRK07036 hypothetical protein; 99.5 2.6E-12 5.7E-17 116.9 17.7 265 11-281 51-381 (466)
353 TIGR00508 bioA adenosylmethion 99.5 2.2E-12 4.7E-17 116.4 17.0 252 11-271 45-353 (427)
354 PRK06931 diaminobutyrate--2-ox 99.5 3E-12 6.4E-17 116.3 17.8 265 11-282 58-378 (459)
355 KOG1358 Serine palmitoyltransf 99.5 1.2E-13 2.7E-18 116.7 7.5 247 12-272 95-376 (467)
356 COG1448 TyrB Aspartate/tyrosin 99.4 1.1E-11 2.3E-16 105.5 17.1 274 11-294 26-365 (396)
357 COG1921 SelA Selenocysteine sy 99.4 5.3E-12 1.1E-16 108.8 15.4 184 57-249 70-268 (395)
358 KOG0258 Alanine aminotransfera 99.4 7.7E-12 1.7E-16 106.0 15.8 223 49-275 109-386 (475)
359 PRK06148 hypothetical protein; 99.4 5.6E-12 1.2E-16 124.3 17.2 263 11-281 624-939 (1013)
360 KOG1402 Ornithine aminotransfe 99.4 2E-11 4.3E-16 101.4 17.1 222 57-282 103-363 (427)
361 KOG1404 Alanine-glyoxylate ami 99.4 3.9E-12 8.5E-17 107.9 12.6 227 53-282 90-367 (442)
362 TIGR02617 tnaA_trp_ase tryptop 99.4 1.3E-11 2.8E-16 108.5 15.9 216 53-271 72-344 (467)
363 COG0161 BioA Adenosylmethionin 99.4 1.4E-11 3.1E-16 108.5 15.7 227 53-282 86-375 (449)
364 TIGR03811 tyr_de_CO2_Ent tyros 99.4 4.8E-11 1E-15 110.6 19.9 171 95-271 224-475 (608)
365 TIGR00461 gcvP glycine dehydro 99.4 2.7E-11 5.8E-16 116.1 18.2 190 15-218 67-275 (939)
366 PRK06209 glutamate-1-semialdeh 99.4 8.3E-12 1.8E-16 112.8 14.1 251 11-270 48-328 (431)
367 PF02347 GDC-P: Glycine cleava 99.4 2.9E-11 6.2E-16 106.7 16.8 208 57-271 112-364 (429)
368 KOG1401 Acetylornithine aminot 99.4 2E-11 4.4E-16 104.2 14.7 211 57-270 100-347 (433)
369 PRK08297 L-lysine aminotransfe 99.3 4.1E-11 8.9E-16 108.5 15.0 250 11-270 45-364 (443)
370 PLN02974 adenosylmethionine-8- 99.3 4.7E-11 1E-15 114.2 15.4 267 12-282 366-750 (817)
371 TIGR03251 LAT_fam L-lysine 6-t 99.3 5.8E-11 1.3E-15 107.3 15.0 252 11-270 38-357 (431)
372 TIGR00699 GABAtrns_euk 4-amino 99.3 3.7E-11 8E-16 108.7 12.6 250 11-270 58-387 (464)
373 COG1003 GcvP Glycine cleavage 99.3 5E-11 1.1E-15 102.7 12.3 155 57-216 111-286 (496)
374 PRK12566 glycine dehydrogenase 99.3 3.1E-10 6.8E-15 108.4 17.8 191 13-218 80-289 (954)
375 PLN02452 phosphoserine transam 99.3 2.5E-10 5.3E-15 100.6 15.4 202 57-274 54-288 (365)
376 PF12897 Aminotran_MocR: Alani 99.2 2.5E-09 5.5E-14 91.4 17.4 160 57-222 71-274 (425)
377 PRK12462 phosphoserine aminotr 99.1 3.9E-09 8.5E-14 92.2 17.0 203 57-273 51-286 (364)
378 KOG2467 Glycine/serine hydroxy 99.0 1.9E-08 4E-13 85.2 15.6 213 53-271 80-340 (477)
379 KOG0629 Glutamate decarboxylas 99.0 1.2E-08 2.7E-13 87.8 14.2 224 44-273 128-415 (510)
380 KOG1383 Glutamate decarboxylas 99.0 1E-08 2.3E-13 89.3 12.3 217 58-280 123-382 (491)
381 KOG2040 Glycine dehydrogenase 98.9 4.6E-09 1E-13 94.7 6.4 174 19-201 124-309 (1001)
382 PF04864 Alliinase_C: Allinase 98.8 6.2E-08 1.3E-12 81.9 11.8 203 57-270 45-277 (363)
383 PF05889 SLA_LP_auto_ag: Solub 98.7 1.3E-07 2.9E-12 81.9 11.8 129 91-225 99-246 (389)
384 COG3033 TnaA Tryptophanase [Am 98.7 7.5E-07 1.6E-11 75.5 15.0 213 53-271 77-346 (471)
385 KOG1412 Aspartate aminotransfe 98.6 2.4E-06 5.2E-11 71.1 15.7 133 76-214 105-266 (410)
386 KOG1403 Predicted alanine-glyo 98.5 1.7E-07 3.7E-12 77.5 4.3 180 67-250 99-328 (452)
387 KOG1411 Aspartate aminotransfe 98.4 8.5E-06 1.9E-10 68.8 13.3 213 77-294 127-392 (427)
388 KOG2040 Glycine dehydrogenase 98.4 1.1E-05 2.3E-10 73.5 13.3 210 57-272 584-837 (1001)
389 KOG0628 Aromatic-L-amino-acid/ 98.1 0.00016 3.5E-09 63.6 14.4 216 53-274 107-396 (511)
390 KOG3846 L-kynurenine hydrolase 97.9 7.9E-05 1.7E-09 62.2 9.6 141 75-215 133-291 (465)
391 PLN02994 1-aminocyclopropane-1 97.7 0.00014 3E-09 55.9 6.2 57 49-105 88-153 (153)
392 COG1932 SerC Phosphoserine ami 97.6 0.00066 1.4E-08 58.3 10.0 199 57-272 52-287 (365)
393 KOG1405 4-aminobutyrate aminot 97.1 0.0025 5.4E-08 54.6 8.0 73 129-203 255-345 (484)
394 KOG3843 Predicted serine hydro 96.2 0.045 9.8E-07 45.2 8.8 97 128-226 142-249 (432)
395 PF05368 NmrA: NmrA-like famil 88.6 2 4.3E-05 35.3 7.1 91 79-174 8-99 (233)
396 PLN02672 methionine S-methyltr 85.0 23 0.00049 36.3 13.1 178 48-228 421-627 (1082)
397 COG0552 FtsY Signal recognitio 82.1 5.1 0.00011 34.8 6.4 103 80-182 153-273 (340)
398 TIGR01470 cysG_Nterm siroheme 81.3 16 0.00035 29.5 8.9 93 71-178 10-104 (205)
399 PF00265 TK: Thymidine kinase; 80.7 7 0.00015 30.8 6.4 96 78-177 12-111 (176)
400 PF02310 B12-binding: B12 bind 80.4 4.2 9.2E-05 29.4 4.9 88 107-196 17-110 (121)
401 PF13460 NAD_binding_10: NADH( 80.2 15 0.00033 28.5 8.4 87 75-170 2-90 (183)
402 KOG1371 UDP-glucose 4-epimeras 79.6 3.9 8.5E-05 35.3 4.9 102 73-174 4-124 (343)
403 PRK04296 thymidine kinase; Pro 78.8 9.7 0.00021 30.3 6.8 94 81-177 18-114 (190)
404 PRK08335 translation initiatio 78.0 34 0.00075 29.1 10.1 102 67-174 106-216 (275)
405 PLN00191 enolase 76.4 22 0.00048 32.7 9.1 95 80-176 298-395 (457)
406 TIGR03649 ergot_EASG ergot alk 75.6 16 0.00034 31.0 7.7 88 74-170 2-97 (285)
407 COG2870 RfaE ADP-heptose synth 75.2 15 0.00032 32.9 7.2 48 128-177 129-179 (467)
408 COG1087 GalE UDP-glucose 4-epi 74.9 25 0.00054 30.3 8.3 95 73-171 2-111 (329)
409 COG1198 PriA Primosomal protei 74.5 10 0.00022 36.9 6.7 91 55-145 201-302 (730)
410 COG1184 GCD2 Translation initi 73.0 61 0.0013 27.9 10.5 101 72-178 121-231 (301)
411 PRK08535 translation initiatio 71.9 39 0.00083 29.4 9.2 99 71-175 121-228 (310)
412 PF01596 Methyltransf_3: O-met 71.4 24 0.00051 28.6 7.3 123 55-182 31-161 (205)
413 cd02067 B12-binding B12 bindin 71.4 27 0.00059 25.2 7.1 59 108-168 17-77 (119)
414 PTZ00081 enolase; Provisional 71.2 24 0.00053 32.3 8.0 91 83-175 287-382 (439)
415 PF01008 IF-2B: Initiation fac 70.6 30 0.00065 29.4 8.2 100 71-175 108-216 (282)
416 PF01073 3Beta_HSD: 3-beta hyd 70.5 28 0.0006 29.7 7.9 93 76-171 2-109 (280)
417 TIGR00511 ribulose_e2b2 ribose 70.0 45 0.00098 28.8 9.1 99 71-175 116-223 (301)
418 KOG2865 NADH:ubiquinone oxidor 69.5 38 0.00082 29.1 8.1 88 82-170 74-169 (391)
419 cd03313 enolase Enolase: Enola 69.0 20 0.00044 32.4 7.1 93 81-174 265-361 (408)
420 COG1088 RfbB dTDP-D-glucose 4, 68.2 49 0.0011 28.6 8.5 131 74-204 3-172 (340)
421 COG2185 Sbm Methylmalonyl-CoA 67.4 24 0.00053 26.6 6.0 75 94-170 13-92 (143)
422 TIGR01060 eno phosphopyruvate 67.4 36 0.00078 31.1 8.4 92 81-174 266-362 (425)
423 PF07085 DRTGG: DRTGG domain; 66.8 30 0.00065 24.4 6.3 48 121-174 43-90 (105)
424 CHL00200 trpA tryptophan synth 66.2 34 0.00074 28.9 7.4 12 139-150 144-155 (263)
425 PRK02261 methylaspartate mutas 65.5 49 0.0011 24.8 7.5 59 108-168 21-81 (137)
426 PF00106 adh_short: short chai 65.1 24 0.00053 26.8 6.1 92 73-165 2-108 (167)
427 KOG2790 Phosphoserine aminotra 65.1 50 0.0011 28.3 7.9 203 57-273 54-292 (370)
428 PRK06372 translation initiatio 65.0 84 0.0018 26.4 10.5 97 72-174 88-190 (253)
429 TIGR02026 BchE magnesium-proto 64.6 33 0.00071 32.0 7.7 84 111-197 29-122 (497)
430 PF02603 Hpr_kinase_N: HPr Ser 64.6 13 0.00028 27.5 4.2 41 130-176 72-112 (127)
431 CHL00194 ycf39 Ycf39; Provisio 64.3 50 0.0011 28.5 8.5 91 74-170 3-102 (317)
432 PLN02476 O-methyltransferase 64.3 92 0.002 26.6 9.9 119 59-183 108-235 (278)
433 COG1066 Sms Predicted ATP-depe 63.6 91 0.002 28.3 9.7 86 85-174 113-215 (456)
434 smart00642 Aamy Alpha-amylase 63.3 8.7 0.00019 29.9 3.2 29 151-179 65-93 (166)
435 PRK14106 murD UDP-N-acetylmura 63.2 33 0.00072 31.4 7.5 94 71-177 6-100 (450)
436 COG0352 ThiE Thiamine monophos 63.0 15 0.00033 29.8 4.6 50 129-178 24-74 (211)
437 KOG1465 Translation initiation 62.8 1E+02 0.0022 26.6 10.5 102 71-177 163-272 (353)
438 PRK00077 eno enolase; Provisio 62.8 43 0.00092 30.6 7.9 91 82-174 266-361 (425)
439 PRK05993 short chain dehydroge 62.5 51 0.0011 27.7 8.1 70 72-146 5-83 (277)
440 COG0296 GlgB 1,4-alpha-glucan 62.3 8.4 0.00018 36.7 3.4 33 147-179 205-237 (628)
441 PRK05678 succinyl-CoA syntheta 61.7 33 0.00072 29.5 6.6 72 101-179 52-126 (291)
442 PF02844 GARS_N: Phosphoribosy 61.1 35 0.00075 24.1 5.5 84 73-173 3-90 (100)
443 PRK10886 DnaA initiator-associ 60.8 67 0.0015 25.8 7.9 44 131-178 102-145 (196)
444 cd00532 MGS-like MGS-like doma 60.6 53 0.0012 23.5 6.7 61 115-176 39-106 (112)
445 COG1648 CysG Siroheme synthase 60.3 92 0.002 25.3 12.3 92 72-177 14-106 (210)
446 PRK05562 precorrin-2 dehydroge 60.2 96 0.0021 25.5 10.4 92 72-177 27-119 (223)
447 PRK05580 primosome assembly pr 60.1 1E+02 0.0022 30.2 10.4 94 77-182 172-272 (679)
448 COG2984 ABC-type uncharacteriz 60.0 65 0.0014 28.0 8.0 68 108-178 178-248 (322)
449 COG0159 TrpA Tryptophan syntha 59.9 51 0.0011 27.9 7.2 13 139-151 147-159 (265)
450 PF04989 CmcI: Cephalosporin h 59.7 32 0.0007 27.8 5.9 97 77-177 43-149 (206)
451 PRK06718 precorrin-2 dehydroge 59.0 73 0.0016 25.7 7.9 36 71-106 11-46 (202)
452 cd02068 radical_SAM_B12_BD B12 59.0 63 0.0014 23.5 7.1 83 111-196 9-96 (127)
453 KOG2741 Dimeric dihydrodiol de 58.7 28 0.0006 30.5 5.6 72 101-179 59-132 (351)
454 TIGR03573 WbuX N-acetyl sugar 58.6 81 0.0017 27.8 8.7 77 97-179 90-170 (343)
455 PF14258 DUF4350: Domain of un 57.5 48 0.001 21.2 5.6 61 110-175 10-70 (70)
456 PF00290 Trp_syntA: Tryptophan 57.4 50 0.0011 27.9 6.9 74 94-168 117-196 (259)
457 COG1748 LYS9 Saccharopine dehy 56.8 1.2E+02 0.0027 27.2 9.5 107 72-181 3-128 (389)
458 PF00128 Alpha-amylase: Alpha 56.7 9.6 0.00021 32.5 2.7 30 149-178 45-74 (316)
459 TIGR00715 precor6x_red precorr 56.1 72 0.0016 26.9 7.6 90 74-173 3-96 (256)
460 TIGR01425 SRP54_euk signal rec 55.9 1.3E+02 0.0027 27.6 9.6 95 85-179 120-225 (429)
461 PLN02591 tryptophan synthase 55.6 68 0.0015 26.9 7.4 80 94-174 108-194 (250)
462 PLN02589 caffeoyl-CoA O-methyl 55.5 1.2E+02 0.0027 25.3 10.4 123 55-182 65-196 (247)
463 COG0300 DltE Short-chain dehyd 55.2 62 0.0013 27.4 7.1 64 72-135 7-74 (265)
464 TIGR00595 priA primosomal prot 55.0 29 0.00064 32.4 5.7 95 76-182 6-107 (505)
465 PRK12723 flagellar biosynthesi 54.7 1.2E+02 0.0025 27.4 9.1 86 92-179 205-298 (388)
466 PRK13111 trpA tryptophan synth 54.7 70 0.0015 27.0 7.4 57 112-174 111-171 (258)
467 cd03316 MR_like Mandelate race 54.7 1.5E+02 0.0033 26.1 10.0 79 96-176 218-298 (357)
468 PRK06182 short chain dehydroge 54.6 80 0.0017 26.4 7.9 73 73-150 5-85 (273)
469 COG2102 Predicted ATPases of P 53.8 1.2E+02 0.0027 24.8 8.6 122 73-201 4-146 (223)
470 COG0373 HemA Glutamyl-tRNA red 53.5 71 0.0015 29.0 7.5 94 72-178 180-275 (414)
471 TIGR00715 precor6x_red precorr 53.4 1.4E+02 0.003 25.2 10.2 56 112-167 191-253 (256)
472 PRK00771 signal recognition pa 53.2 1.6E+02 0.0036 27.0 10.0 123 57-179 71-218 (437)
473 TIGR01501 MthylAspMutase methy 53.2 47 0.001 24.9 5.4 61 108-170 19-81 (134)
474 PRK10867 signal recognition pa 53.1 1.6E+02 0.0034 27.0 9.8 95 84-178 119-225 (433)
475 PF02254 TrkA_N: TrkA-N domain 52.5 43 0.00093 23.8 5.2 84 74-167 2-85 (116)
476 PTZ00293 thymidine kinase; Pro 52.4 46 0.001 27.1 5.7 96 77-177 14-111 (211)
477 PRK09441 cytoplasmic alpha-amy 52.3 15 0.00032 34.1 3.3 30 149-178 74-103 (479)
478 COG0514 RecQ Superfamily II DN 52.2 57 0.0012 31.0 7.0 100 77-183 41-146 (590)
479 COG1606 ATP-utilizing enzymes 51.9 91 0.002 26.2 7.3 109 57-178 7-122 (269)
480 PF10087 DUF2325: Uncharacteri 51.7 78 0.0017 21.9 6.5 64 110-177 15-83 (97)
481 PF03435 Saccharop_dh: Sacchar 51.7 1.6E+02 0.0034 26.3 9.7 73 74-148 2-76 (386)
482 cd02070 corrinoid_protein_B12- 51.5 1E+02 0.0022 24.7 7.7 73 94-168 83-160 (201)
483 PRK06512 thiamine-phosphate py 51.4 34 0.00073 28.1 4.9 49 129-177 29-79 (221)
484 cd01455 vWA_F11C1-5a_type Von 51.2 52 0.0011 26.3 5.7 35 140-174 113-147 (191)
485 PRK15181 Vi polysaccharide bio 51.1 1.5E+02 0.0033 25.9 9.4 98 72-170 16-133 (348)
486 COG0074 SucD Succinyl-CoA synt 50.5 85 0.0018 26.8 7.0 80 95-179 46-126 (293)
487 COG1737 RpiR Transcriptional r 50.5 1.5E+02 0.0033 25.2 8.9 36 135-174 174-209 (281)
488 TIGR00640 acid_CoA_mut_C methy 50.4 55 0.0012 24.4 5.5 60 108-169 20-81 (132)
489 PRK01438 murD UDP-N-acetylmura 50.0 75 0.0016 29.4 7.5 93 71-176 17-109 (480)
490 PTZ00314 inosine-5'-monophosph 49.7 2E+02 0.0043 26.9 10.1 115 81-195 241-371 (495)
491 TIGR01019 sucCoAalpha succinyl 49.4 64 0.0014 27.7 6.4 60 117-179 64-124 (286)
492 PLN02253 xanthoxin dehydrogena 49.4 53 0.0011 27.6 6.0 75 72-146 19-101 (280)
493 cd03315 MLE_like Muconate lact 49.3 1.6E+02 0.0034 24.7 9.3 78 97-176 159-238 (265)
494 PRK14873 primosome assembly pr 49.2 70 0.0015 31.1 7.3 68 77-144 170-245 (665)
495 COG2390 DeoR Transcriptional r 48.8 1.9E+02 0.004 25.4 9.6 48 57-107 67-126 (321)
496 PRK06179 short chain dehydroge 48.4 1.1E+02 0.0024 25.4 7.9 71 72-149 5-83 (270)
497 PRK06138 short chain dehydroge 48.2 1.5E+02 0.0033 24.1 8.9 77 72-148 6-90 (252)
498 PRK05234 mgsA methylglyoxal sy 47.6 66 0.0014 24.3 5.6 47 131-177 66-114 (142)
499 PF02581 TMP-TENI: Thiamine mo 47.6 25 0.00054 27.7 3.5 49 129-177 15-64 (180)
500 PRK12935 acetoacetyl-CoA reduc 47.5 1.2E+02 0.0026 24.7 7.8 77 72-148 7-93 (247)
No 1
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2e-45 Score=324.37 Aligned_cols=297 Identities=38% Similarity=0.606 Sum_probs=266.5
Q ss_pred CCCCCccceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHH
Q 022194 4 EEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (301)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~a 82 (301)
|.|..++|..++.+.. .+..|...+|++.+.+|..+.......|.|+++++|..++|++.++++.|.+.+++++||++|
T Consensus 1 ~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt~gg~~A 80 (388)
T PRK08861 1 MSTRKPATIAVRTGIESDSQYHAVVPPIYLSTNYGFPAFGEVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVTNCGTSA 80 (388)
T ss_pred CCCCCcccceeECCCCCCCCCCCccCCcccCcceEeCCcCccCCccccCCCCchHHHHHHHHHHHhCCCeEEEECCHHHH
Confidence 4566677888887622 334689999999999997766434456889999999999999999999999989999999999
Q ss_pred HH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 022194 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 83 i~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
+. ++..++++||+|++++|.|++....+.......|+++..++..|++++++++++++++|++++|+||||.+.|+++|
T Consensus 81 i~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I 160 (388)
T PRK08861 81 LNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAEL 160 (388)
T ss_pred HHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHH
Confidence 96 66678999999999999999877666555667789999999889999999999899999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHH
Q 022194 162 AEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 241 (301)
Q Consensus 162 ~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (301)
.++|+++|+++|+|++|..+....+...|+|+++.|++|+++|+.++++|+++++++.+.++++......|..++|..++
T Consensus 161 ~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~ 240 (388)
T PRK08861 161 CQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSY 240 (388)
T ss_pred HHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHH
Confidence 99999999999999999998888888899999999999999999888899999877778887888888889999999999
Q ss_pred HHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 242 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
.++++++.+..|.+++.+++..+.++|+.+|.|..|+||+++++|+|++++++++++||
T Consensus 241 l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg 299 (388)
T PRK08861 241 MTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGS 299 (388)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999987776
No 2
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=1.3e-44 Score=324.06 Aligned_cols=298 Identities=83% Similarity=1.272 Sum_probs=268.0
Q ss_pred CCCCCCccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHH
Q 022194 3 VEEEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (301)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~a 82 (301)
+.+++..+|..++.+...++.|...+|++.+.+|..+...+...+.|++.|+|.+++++++++++.+.+.++++++|++|
T Consensus 81 ~~~~~~~~t~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~~SG~aA 160 (464)
T PLN02509 81 IKEEASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAA 160 (464)
T ss_pred cccCCCcchHheeCCCCCCCCCCccCCccccceecCccccccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEeCcHHHH
Confidence 34466777888887733355789999999999998766555567889999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 022194 83 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 83 i~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
+.++..++++||+|+++++.|+++...+...+...|++++.++..|++++++++++++++|++++|+||+|.+.|+++|+
T Consensus 161 i~~il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~ 240 (464)
T PLN02509 161 LSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIA 240 (464)
T ss_pred HHHHHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHH
Confidence 88777789999999999999999877776667788999999998899999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHH
Q 022194 163 EMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (301)
Q Consensus 163 ~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
++|+++|+++|+|++|+.+....+...++|+++.|++|+++|++++.+|+++.+++.+.+.++..+...+..+++..++.
T Consensus 241 ~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l 320 (464)
T PLN02509 241 EMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWL 320 (464)
T ss_pred HHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHH
Confidence 99999999999999999888888888899999999999999988888999998777777766666666777889999999
Q ss_pred HHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
.+++++.+..|+++..++++++.++|+++|.|+.|.||||+++|+|.+++++++++||
T Consensus 321 ~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg 378 (464)
T PLN02509 321 CLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGS 378 (464)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCce
Confidence 9999999999999999999999999999999999999999999999999999988876
No 3
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-44 Score=311.25 Aligned_cols=294 Identities=51% Similarity=0.825 Sum_probs=271.9
Q ss_pred CCccceeeecCCCC-CCCCccccCeeecceeecCCCCC--------CCCccccCCCCchHHHHHHHHHhhcCCCceEEec
Q 022194 7 PGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (301)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~g~~~~p~~~~~~~~~~~~~~--------~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~ 77 (301)
..+.|..++.+... +..|...+|++.+.+|..+...+ ...+.|+|.++|.++.+++.++++-|.+.++.++
T Consensus 6 ~~~~T~~v~~g~~~~~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~afs 85 (396)
T COG0626 6 LSLTTRLVHAGRRPDDLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAFS 85 (396)
T ss_pred cccceeeEEcccccccCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEec
Confidence 45668889988545 46999999999999988766432 4678999999999999999999999999999999
Q ss_pred chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC-CCceEEEEeCCCCCcccc
Q 022194 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 78 sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~~~np~G~~ 155 (301)
||++||. +++.++++||+|++++..|++..+.+..+.++.|+++.+++..+.+.+++++. +++++|++++|.||+..+
T Consensus 86 SGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v 165 (396)
T COG0626 86 SGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLEV 165 (396)
T ss_pred CcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCccccc
Confidence 9999996 68899999999999999999999999999999999999999988888888887 599999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh-hcCCC
Q 022194 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGSG 234 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 234 (301)
.|+++|+++||++|+++++|++++.+.++.|++.|+||++.|.+|+++|...+++|.++.+++.+.+.+..... ..|..
T Consensus 166 ~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~ 245 (396)
T COG0626 166 PDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAV 245 (396)
T ss_pred ccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999888888888887755665 58999
Q ss_pred CCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
++|..+|.++++++.+..|.+++.+|+..+.++|+++|.|+.|+||+++++|+|.+++++.++.||
T Consensus 246 l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg 311 (396)
T COG0626 246 LSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGG 311 (396)
T ss_pred CCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCce
Confidence 999999999999999999999999999999999999999999999999999999999999988776
No 4
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=8.5e-44 Score=312.66 Aligned_cols=294 Identities=26% Similarity=0.434 Sum_probs=261.7
Q ss_pred CCCccceeeecCCCCC-CCCccccCeeecceeecCCCC--------C-CCCccccCCCCchHHHHHHHHHhhcCCCceEE
Q 022194 6 EPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRALC 75 (301)
Q Consensus 6 ~~~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~--------~-~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~ 75 (301)
+...+|..++.+...+ +.|...+|++.+.+|..+... . ...|.|+|.|+|+++.|++.++++.|.+.+++
T Consensus 3 ~~~~~t~~~~~~~~~~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~ 82 (395)
T PRK08114 3 DKKLDTQLVNAGRSKKYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCAL 82 (395)
T ss_pred CCCcchheEeCCCCCCCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Confidence 3445677777663233 358999999999988654421 1 13478999999999999999999999999999
Q ss_pred ecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccc
Q 022194 76 FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (301)
Q Consensus 76 ~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~ 154 (301)
++||++|+. ++..++++||+|++++..|.+....+...+++.|+++.+++..|.+.+++++++++++|++++|.||+|.
T Consensus 83 ~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~ 162 (395)
T PRK08114 83 YPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPNTKVVFLESPGSITME 162 (395)
T ss_pred EhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCE
Confidence 999999996 6778899999999999999999888877788899999999998999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcC--CEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcC
Q 022194 155 ICDIRKIAEMAHAHG--ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 232 (301)
Q Consensus 155 ~~~l~~l~~l~~~~~--~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~ 232 (301)
+.|+++|+++||+++ +++++|++++.+...++++.|+|+++.|.+|+++|++++.+|+++.++ .+.+.++......|
T Consensus 163 v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~-~~~~~l~~~~~~~G 241 (395)
T PRK08114 163 VHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA-RCWEQLRENSYLMG 241 (395)
T ss_pred eecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH-HHHHHHHHHHHhcc
Confidence 999999999999984 999999999999999999999999999999999999989899887664 45565666677788
Q ss_pred CCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 233 SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 233 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
..+++..+|.++++++.+..|.+++.+++..+.++|+++|.|..|+||+++++|+|++++++++++||
T Consensus 242 ~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg 309 (395)
T PRK08114 242 QMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSG 309 (395)
T ss_pred CCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999987776
No 5
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.6e-43 Score=310.57 Aligned_cols=291 Identities=28% Similarity=0.499 Sum_probs=256.8
Q ss_pred ccceeeecCCCCC-CCCccccCeeecceeecCCCC--------C-CCCccccCCCCchHHHHHHHHHhhcCCCceEEecc
Q 022194 9 VSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (301)
Q Consensus 9 ~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~--------~-~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~s 78 (301)
++|..++.+-..+ +.|...+|++.+.+|..+... . ...+.|++.++|...+|++.++++.+.+++++++|
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~~~s 84 (394)
T PRK09028 5 KATKIVSAGRDKKWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTALYPS 84 (394)
T ss_pred ccceeEEcCCCCCCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 4566777662233 348999999999998654321 1 13477999999999999999999998888999999
Q ss_pred hHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 79 G~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
|++|+. ++.+++++||+|+++++.|.++...+...++..|+++..++..+.+.+++++++++++|++++|+||+|.+.|
T Consensus 85 G~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~TklV~lespsNPtg~v~d 164 (394)
T PRK09028 85 GAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPNTKVLFLESPGSITMEVQD 164 (394)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCcHHH
Confidence 999986 6777899999999999999988876666677899999999888888999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCH
Q 022194 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 237 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
+++|+++||++|+++++|++|+.+....+++.|+|+++.|.+|+++|++++++|+++.+ +.+.+.+.......|..+++
T Consensus 165 l~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~-~~~~~~l~~~~~~~G~~~~p 243 (394)
T PRK09028 165 VPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATAN-EKHWDQLREHSYLMGQCTSP 243 (394)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECC-HHHHHHHHHHHHhcCCCCCH
Confidence 99999999999999999999999988889999999999999999999999999987654 45556666666677899999
Q ss_pred HhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 238 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
..++.++++++.+..|.+++.+++..+.++|+++|.|..|.|||++++|+|++++++.+++||
T Consensus 244 ~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg 306 (394)
T PRK09028 244 DDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNG 306 (394)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCc
Confidence 999999999999999999999999999999999999999999999999999999999988776
No 6
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.8e-43 Score=310.93 Aligned_cols=291 Identities=31% Similarity=0.493 Sum_probs=260.3
Q ss_pred ccceeeecCCC-CCCCCccccCeeecceeecCCCC----CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHH
Q 022194 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT----ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (301)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~----~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai 83 (301)
.+|..++.+.. .++.|...+|++.+.+|..+... ....|.|++.|+|.++.+++.++.+.+.+..++++||++|+
T Consensus 13 ~~t~~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~sSG~aAi 92 (395)
T PRK05967 13 INTRLAHDGNDPGDYHGFVNPPVVHASTVLFPDAETMATRGQKYTYGTRGTPTTDALCKAIDALEGSAGTILVPSGLAAV 92 (395)
T ss_pred cccceeeCCCCCCCCCCCccCCccCCcceecCChHHhhcccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEECcHHHHH
Confidence 45667776522 34579999999999999765532 23468899999999999999999999888899999999998
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
. ++.+++++||+|+++++.|+++...+...++..|+++.+++..+.+.+++++++++++|++++|+||++.+.|+++|+
T Consensus 93 ~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~ 172 (395)
T PRK05967 93 TVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIA 172 (395)
T ss_pred HHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHH
Confidence 6 667899999999999999999987776788999999999998888889999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHH
Q 022194 163 EMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (301)
Q Consensus 163 ~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
++||++|+++++|++++.+....+++.|+|+++.|.+|+++|.+++++|+++.++ .+.+++.......|..+++..++.
T Consensus 173 ~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~-~~~~~l~~~~~~~G~~~~p~da~l 251 (395)
T PRK05967 173 EAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANE-KCWPQLLEAHGTLGLCAGPDDTYQ 251 (395)
T ss_pred HHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCH-HHHHHHHHHHHHcCCCCCHHHHHH
Confidence 9999999999999999999989999999999999999999999999999887664 455656666667789999999999
Q ss_pred HHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
++++++.+..|.+++.+++..+.++|+++|.|..|+||+++++|+|++++++.+++||
T Consensus 252 ~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg 309 (395)
T PRK05967 252 ILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASG 309 (395)
T ss_pred HHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCce
Confidence 9999999999999999999999999999999999999999999999999999987776
No 7
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=5.1e-43 Score=309.95 Aligned_cols=293 Identities=37% Similarity=0.573 Sum_probs=260.4
Q ss_pred CccceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-H
Q 022194 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (301)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~ 85 (301)
.++|..++.+.. .+..|...+|++.+.+|..+...+...+.|+++++|.+++++++++++.|.+++++++||++|+. +
T Consensus 4 ~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~ 83 (386)
T PRK08045 4 KQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLV 83 (386)
T ss_pred CcccceeEcCCCCCCCCCCccCCccCCcceecCCccccCCceeeCCCCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHH
Confidence 455667776522 33469999999999999876654445688999999999999999999999888889999999986 5
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~ 165 (301)
+..++++||+|++++|.|++....+.......++++..++..|.+++++++++++++|++++|+||||.+.|+++|.++|
T Consensus 84 l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia 163 (386)
T PRK08045 84 TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLA 163 (386)
T ss_pred HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHH
Confidence 66789999999999999998776666666667778888887789999999988999999999999999999999999999
Q ss_pred HHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHc
Q 022194 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (301)
Q Consensus 166 ~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
+++|+++|+|++|..+....+...++|+++.|++|+++|++++++|+++.+++.+.+.+.......+..+++..++++++
T Consensus 164 ~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~r 243 (386)
T PRK08045 164 REAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLR 243 (386)
T ss_pred HHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 99999999999999888778888899999999999999999999999988777777777777777888899999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++.+..|++++.+++..+.++|+++|.|..|+||+++++|+|++++++++++||
T Consensus 244 gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~ 298 (386)
T PRK08045 244 GLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGA 298 (386)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCc
Confidence 9999999999999999999999999999999999999999999999999988777
No 8
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=6.8e-44 Score=312.74 Aligned_cols=279 Identities=49% Similarity=0.814 Sum_probs=246.5
Q ss_pred CCCccccCeeecceeecC-------CCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHH-HHHHhccCCC
Q 022194 22 PYGALSTPLYQTATFKQP-------SATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL-AAVTHLLGTG 93 (301)
Q Consensus 22 ~~g~~~~p~~~~~~~~~~-------~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~~~~~~g 93 (301)
..|...+|++.+.+|..+ .......+.|+|.|+|..+.+++.++++.+.+.+++++||++|+ .++++++++|
T Consensus 15 ~~~~v~~pi~~sstf~~~~~~~~~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~~G 94 (386)
T PF01053_consen 15 QTGAVNPPIYQSSTFVFDSAEELDAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLKPG 94 (386)
T ss_dssp TTTBSS--B---SBBBBSSHHHHHHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS-TT
T ss_pred CCCCeeCCccccccCcccchHHHHhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcccC
Confidence 689999999999999887 23345668999999999999999999999999999999999999 5888899999
Q ss_pred CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC-CEE
Q 022194 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG-ALL 172 (301)
Q Consensus 94 ~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~-~~l 172 (301)
|+|++++..|++....++..+...|+++.+++..|++++++++++++++|++++|.||+..+.|+++|+++||++| +++
T Consensus 95 d~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~ 174 (386)
T PF01053_consen 95 DHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILV 174 (386)
T ss_dssp BEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EE
T ss_pred CceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceE
Confidence 9999999999999999988899999999999999999999999999999999999999999999999999999998 999
Q ss_pred EEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcc-hhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH
Q 022194 173 LVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA 251 (301)
Q Consensus 173 i~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 251 (301)
++|++++.+...+++..|+|+++.|++|+++|...+++|+++.++ +.+.+.++......|..+++..++.++++++.+.
T Consensus 175 vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl~ 254 (386)
T PF01053_consen 175 VVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTLP 254 (386)
T ss_dssp EEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTHH
T ss_pred EeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcHH
Confidence 999999999999999999999999999999999999999999887 6777778888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 252 LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 252 ~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
.|.+++.++++.+.++|+++|.|..|.+|+++++|+|.+++++++++||
T Consensus 255 ~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg 303 (386)
T PF01053_consen 255 LRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGG 303 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCc
Confidence 9999999999999999999999999999999999999999999998887
No 9
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=2.3e-42 Score=305.61 Aligned_cols=293 Identities=41% Similarity=0.654 Sum_probs=258.8
Q ss_pred CccceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-H
Q 022194 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (301)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~ 85 (301)
+.+|..++.+.. .++.|...+|++.+.++..........+.|+++++|..+++++.++++.+.+++++++||++|+. +
T Consensus 3 ~~~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~ 82 (382)
T TIGR02080 3 KQATIAVRSGLNSDTQYGCVVPPIYLSTTYNFTGFNEPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLV 82 (382)
T ss_pred CcccceeecCCCCCCCCCCccCCeeCCceeEeCCcCccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHH
Confidence 455666766522 23469999999999998654432334577999999999999999999999888888888999996 6
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~ 165 (301)
+..++++||+|++++|.|++....+.......++++..++..|++.+++++++++++|++++|+||||.+.|+++|+++|
T Consensus 83 l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la 162 (382)
T TIGR02080 83 TTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLA 162 (382)
T ss_pred HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHH
Confidence 66789999999999999998777666666777889988887899999999998999999999999999999999999999
Q ss_pred HHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHc
Q 022194 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (301)
Q Consensus 166 ~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
+++|+++++|++|..+....+...++|+++.|++|+++|++++++|+++.+++.+.+++.......+..+++..++.+++
T Consensus 163 ~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr 242 (382)
T TIGR02080 163 KAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLR 242 (382)
T ss_pred HHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHc
Confidence 99999999999998887767777789999999999999899999999988877888888877788889999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++.+..|.++..+|+..+.++|+++|.|..|+||+++++|+|.+++++.+++||
T Consensus 243 ~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~ 297 (382)
T TIGR02080 243 GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGA 297 (382)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCc
Confidence 9999999999999999999999999999999999999999999999999988876
No 10
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=6e-42 Score=302.00 Aligned_cols=278 Identities=28% Similarity=0.476 Sum_probs=248.2
Q ss_pred CCCccccCeeecceeecCCCC----CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeE
Q 022194 22 PYGALSTPLYQTATFKQPSAT----ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEI 96 (301)
Q Consensus 22 ~~g~~~~p~~~~~~~~~~~~~----~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~V 96 (301)
..|...+|++.+.+|..+... ....+.|+|.|+|..+++++.++++.|.+++++++||++|+. ++.+++++||+|
T Consensus 13 ~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~~GD~V 92 (377)
T TIGR01324 13 SQGSVNPPLQRASTVLFDSHAAQRRAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVKAGDHV 92 (377)
T ss_pred CCCCccCCeeCCCceeeCChhhhcCCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcCCCCEE
Confidence 468999999999999765421 234578999999999999999999999999999999999985 677789999999
Q ss_pred EEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 022194 97 VAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 97 lv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~ 176 (301)
+++++.|+++...+....+..|+++..++..+.+.+++++++++++|++++|+||+|...|+++|+++|+++|+++|+|+
T Consensus 93 l~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~ 172 (377)
T TIGR01324 93 LMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDN 172 (377)
T ss_pred EEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEEC
Confidence 99999999887655555677899999888766688999999999999999999999999999999999999999999999
Q ss_pred CcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHH
Q 022194 177 SIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEK 256 (301)
Q Consensus 177 ~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 256 (301)
+|+.+....+.+.|+|+++.|++|+++|++++.+|+++.+++ ..+.+.......|..+++..++..+++++.+..|.++
T Consensus 173 t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~-~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~~R~~~ 251 (377)
T TIGR01324 173 TWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANAR-TWDQLREHSYLMGQMVDADDAYTTLRGLRTLGVRLKQ 251 (377)
T ss_pred CCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHH-HHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHHHHHHH
Confidence 999999888999999999999999999998888998887754 5455555566678899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+.+++.++.++|+++|.|..|++|+++++|+|.+++++.++.||
T Consensus 252 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~ 295 (377)
T TIGR01324 252 HQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSG 295 (377)
T ss_pred HHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCc
Confidence 99999999999999999999999999999999999999886665
No 11
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=9.5e-42 Score=301.43 Aligned_cols=291 Identities=46% Similarity=0.768 Sum_probs=260.6
Q ss_pred cceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 10 STLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 10 ~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
+|..++.+.. .+..|...+|++.+++|..+.......+.|+++++|...++++.++++.|.+.++++++|++++.+++.
T Consensus 4 ~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~~ 83 (377)
T PRK07671 4 KTKLIHGGIIGDPSTGAVSVPIYQVSTYKQEAVGKHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVMM 83 (377)
T ss_pred ccceeeCCCCCCCCCCCccCCccCCcceecCCCCCcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHH
Confidence 4566665522 233689999999999998766444456789999999999999999999999999999999988877777
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
++++||+|++++|.|++....+...+...|++++.++..|++++++++++++++|++++|+||+|.+.++++|.++|+++
T Consensus 84 ~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~ 163 (377)
T PRK07671 84 LFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEK 163 (377)
T ss_pred HhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc
Confidence 89999999999999997776666677889999999998899999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc
Q 022194 169 GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (301)
Q Consensus 169 ~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (301)
|+++|+|++|+.+....+...++|+++.|++|+++|+.+..+|+++++++.+.+++...+...+..+++..++.++++++
T Consensus 164 g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~ 243 (377)
T PRK07671 164 GLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLK 243 (377)
T ss_pred CCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC
Confidence 99999999998877777778899999999999998888777898888877888888888888889999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 249 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
.+..|.++..+|+..+.++|+++|.|..|++|+++++|+|.++++++++.||
T Consensus 244 tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~ 295 (377)
T PRK07671 244 TLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGG 295 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCc
Confidence 9999999999999999999999999999999999999999999999987776
No 12
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=9.1e-42 Score=301.62 Aligned_cols=291 Identities=45% Similarity=0.747 Sum_probs=260.7
Q ss_pred cceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 10 STLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 10 ~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
+|..++.+.. .++.|...+|++.+.+|..+.......|.|+++++|...+|++.++++.|.+.+++++||+.|+.+++.
T Consensus 4 ~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l~ 83 (380)
T PRK06176 4 QTKLIHGGISEDTTTGAVSVPIYQTSTYRQDAIGRPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFS 83 (380)
T ss_pred cceeeECCCCCCCCCCCccCCcccCCceecCCCCCcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHH
Confidence 3455665522 234689999999999998766444456889999999999999999999999999999999999987778
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
++++||+|+++++.|++....+...+...|++++.++..|++++++++++++++|++++|+||+|.+.|+++|+++|+++
T Consensus 84 ~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~ 163 (380)
T PRK06176 84 LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDH 163 (380)
T ss_pred HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHc
Confidence 89999999999999998887777788889999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc
Q 022194 169 GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (301)
Q Consensus 169 ~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (301)
|+++|+|++|+.+....+...++|+++.|++|+++|+++..+|+++.+++.+.+++...+...+..+++..++..+++++
T Consensus 164 gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~ 243 (380)
T PRK06176 164 GLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK 243 (380)
T ss_pred CCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC
Confidence 99999999999887777888899999999999998888778999998777787877777777788889999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 249 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
.+..|.+++.+++.++.++|+++|.|..+++|+++++|+|.+++++.+++||
T Consensus 244 tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~ 295 (380)
T PRK06176 244 TLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSG 295 (380)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCce
Confidence 9999999999999999999999999999999999999999999999977665
No 13
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=1.1e-41 Score=301.47 Aligned_cols=290 Identities=71% Similarity=1.120 Sum_probs=258.3
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHhcc
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL 90 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~~ 90 (301)
|..++.+...++.|...+|++.+.+|..+.......+.|++.|+|.++++++.+++++|.++++++++|++|+.+++.++
T Consensus 3 t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~ll 82 (378)
T TIGR01329 3 TLLVNTDNKNDPYDASSMPIYQTATFKQPLAIENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSSGMAALDVITRLL 82 (378)
T ss_pred ceeEeCCCCCCCCCCcCCCeecCcceecCCccccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHh
Confidence 44455442234468999999999999776644445688999999999999999999999999999999999987666789
Q ss_pred CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCC
Q 022194 91 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGA 170 (301)
Q Consensus 91 ~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~ 170 (301)
++||+|+++++.|+++...+...++..|++++.++..|++++++++++++++|++++|+||+|.+.|+++|+++||++|+
T Consensus 83 ~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~ 162 (378)
T TIGR01329 83 NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNA 162 (378)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCC
Confidence 99999999999999988777777788999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccH
Q 022194 171 LLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM 250 (301)
Q Consensus 171 ~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 250 (301)
++|+|++++.+....+...|+|+++.|++|+++|+.++++|+++++++.+.+++.......+..+++..++.++.+++.+
T Consensus 163 ~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl 242 (378)
T TIGR01329 163 LVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTL 242 (378)
T ss_pred EEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCH
Confidence 99999999888777777889999999999999988888899999987777777777777678888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 251 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
..|.++..+++..+.++|+++|.+..+.+|++++.|+|.+++++.++.||
T Consensus 243 ~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~ 292 (378)
T TIGR01329 243 AIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGS 292 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcce
Confidence 99999999999999999999999999999999999999999998866554
No 14
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=9e-42 Score=303.17 Aligned_cols=295 Identities=35% Similarity=0.648 Sum_probs=257.7
Q ss_pred CCCCccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEE
Q 022194 5 EEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALC 75 (301)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~ 75 (301)
.+...+|..++.+.. .++.|...+|++.+.+|..+... +...+.|+++++|..+++++.++++.|.+++++
T Consensus 5 ~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~ 84 (398)
T PRK08249 5 NNAGVGTKAVWAGEKEYLPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATA 84 (398)
T ss_pred ccCCcccceeeCCCCCCCCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEE
Confidence 344566777877622 24468999999999999765532 223577999999999999999999999999999
Q ss_pred ecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccc
Q 022194 76 FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (301)
Q Consensus 76 ~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~ 154 (301)
++||++|+. ++..++++||+|+++.+.|+++...+...++..|+++.+++..|++++++++++++++|++++|+||+|.
T Consensus 85 ~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~ 164 (398)
T PRK08249 85 FSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKGCDLLYLETPTNPTLK 164 (398)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCCCeEEEEECCCCCCCc
Confidence 999999986 5667899999999999999988777767778899999999988999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCC
Q 022194 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (301)
Q Consensus 155 ~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
+.|+++|+++|+++|+++|+|++|+.+....+...++|+++.|++|+++|++..++|+++.+ +.+.+.++......+..
T Consensus 165 v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~-~~l~~~l~~~~~~~g~~ 243 (398)
T PRK08249 165 IVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGS-KELMEQVYHYREINGAT 243 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECC-HHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999998776666677899999999999977665567887764 56777777777777888
Q ss_pred CCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++..++.++++++.+..+.++..++++.+.++|+++|.|..|+|||++++|+|+++++++++.||
T Consensus 244 ~s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~ 309 (398)
T PRK08249 244 MDPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGG 309 (398)
T ss_pred CCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999987776
No 15
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.4e-41 Score=302.43 Aligned_cols=290 Identities=38% Similarity=0.626 Sum_probs=255.8
Q ss_pred ceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHh
Q 022194 11 TLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTH 88 (301)
Q Consensus 11 ~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~ 88 (301)
|..++.+.. .+..|...+|++.+.++..........|.|+++++|..+++++.++++.|.++.+++++|++++. ++..
T Consensus 15 t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~a 94 (405)
T PRK08776 15 TAAVRAGIDRDTAYGAVTPPIVLSSNFSFDGFGNKRQYDYTRSGNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNA 94 (405)
T ss_pred chheeCCCCCCCCCCCccCCEeccceEEeCCCCcccCCcccCCCChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHH
Confidence 455665522 23468999999999998765543334678999999999999999999999999999999999986 5667
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
++++||+|+++.|.|++....+...++..|+++..++..|.+++++++++++++|++++|+||+|.+.++++|+++|+++
T Consensus 95 ll~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~ 174 (405)
T PRK08776 95 LLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKV 174 (405)
T ss_pred HhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHc
Confidence 89999999999999998776666667778999999998899999999988999999999999999999999999999999
Q ss_pred CCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc
Q 022194 169 GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (301)
Q Consensus 169 ~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (301)
|+++|+|++|..+....+...|+|+++.|++|+++|++++++|+++.+++.+.+++.......+..+++..+++.+++++
T Consensus 175 gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~ 254 (405)
T PRK08776 175 GALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLR 254 (405)
T ss_pred CCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC
Confidence 99999999998877667777899999999999998888888999988877787777766666677789999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 249 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++.+.++..+|+..+.++|+++|.|..|.+|++.++|+|+++++++++.||
T Consensus 255 tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~ 306 (405)
T PRK08776 255 TLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGA 306 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCce
Confidence 9999999999999999999999999999999999999999999999987776
No 16
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-42 Score=293.26 Aligned_cols=292 Identities=48% Similarity=0.727 Sum_probs=269.2
Q ss_pred ccceeeecCCCCCC--CCccccCee--ecceeecC--CCCCCCC---ccccCCCCchHHHHHHHHHhhcCCCceEEecch
Q 022194 9 VSTLLMNFSNEFDP--YGALSTPLY--QTATFKQP--SATENGP---YDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (301)
Q Consensus 9 ~~~~~~~~~~~~~~--~g~~~~p~~--~~~~~~~~--~~~~~~~---~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG 79 (301)
..+..++.+..++- -+...+|++ .+.+|... +...... |.|+|.|+|.++.++..++++.|++.+++++||
T Consensus 22 ~~t~~~~~g~~~~~~~~~~v~~pI~~~~s~tfk~~~~~~~~~~~~~~~~Ysr~~nPt~~~le~~iaal~ga~~~l~fsSG 101 (409)
T KOG0053|consen 22 LDTNLLHAGQDPEKAIHNAVAPPIYATLSTTFKQDLNEGEHGGNLDGYDYSRSGNPTRDVLESGIAALEGAAHALLFSSG 101 (409)
T ss_pred cchhhhhcccccchhccccccCceecccceeecccCccccccccccccccccCCCCchHHHHHHHHHHhCCceEEEeccc
Confidence 44556666645454 688899999 67776664 2222333 899999999999999999999999999999999
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccH
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l 158 (301)
++|+. ++..++++|++|+..+..|.++.+.++.+....|++...++.++++.+++.+++++++|++++|.||+..+.|+
T Consensus 102 maA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI 181 (409)
T KOG0053|consen 102 MAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKENTKAVFLESPSNPLLKVPDI 181 (409)
T ss_pred HHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhccCceEEEEECCCCCccccccH
Confidence 98885 77888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHH
Q 022194 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 238 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
++|+++||++|+++++|++++.+...+++.+|+||++.|.+|+++|...+++|.++.+.+.+.++++..+...++.+++.
T Consensus 182 ~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~ 261 (409)
T KOG0053|consen 182 EKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPF 261 (409)
T ss_pred HHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred hHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 239 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
.++...++++.+..|+++..+++..+.++|+++|.+++++||+|+++|+|+.++++.++++|
T Consensus 262 ~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G 323 (409)
T KOG0053|consen 262 DLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYG 323 (409)
T ss_pred HHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999988
No 17
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=4.2e-41 Score=298.60 Aligned_cols=292 Identities=46% Similarity=0.760 Sum_probs=257.5
Q ss_pred ccceeeecCCC-CCCCCccccCeeecceeecCCCCC-CCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-H
Q 022194 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATE-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (301)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~-~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~ 85 (301)
.++..++.+.. .+..|...+|++.+.+|..+.... ...+.|+++++|...++++.+++++|.+..++++||++|+. +
T Consensus 13 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~ 92 (388)
T PRK07811 13 FATRAIHAGYEPDPATGAVNPPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFSSGMAATDCL 92 (388)
T ss_pred cccceeeCCCCCCCCCCCccCCccCCcceecCCcccccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeCCHHHHHHHH
Confidence 45666766522 234689999999999997655322 24567899899999999999999999999999999999986 6
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~ 165 (301)
+..++++||+|+++++.|.+....+...++..|++++.++..|++++++++++++++|++++|+||+|...++++|+++|
T Consensus 93 l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la 172 (388)
T PRK07811 93 LRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELA 172 (388)
T ss_pred HHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHH
Confidence 67789999999999999998776666677788999999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHc
Q 022194 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (301)
Q Consensus 166 ~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
+++|+++|+|++|+.+....+...++|+++.|++|+++|++++++|+++++++.+.+.+.......+...++..++..+.
T Consensus 173 ~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~ 252 (388)
T PRK07811 173 HDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLR 252 (388)
T ss_pred HHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 99999999999999887777777899999999999998888888999998877887777777666777888889999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++.+..+.++..+|++.+.++|+++|.|..|.+|+++++|+|++++++.++.||
T Consensus 253 ~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~ 307 (388)
T PRK07811 253 GLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGG 307 (388)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCc
Confidence 9999999999999999999999999999999999999999999999999987776
No 18
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.8e-41 Score=298.15 Aligned_cols=285 Identities=40% Similarity=0.620 Sum_probs=248.6
Q ss_pred cceeeecCCCCCCCCccccCeeecceeecCCC----CCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-
Q 022194 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSA----TENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (301)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~----~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~- 84 (301)
+|..++-+...++.|...+|++.+.+|..+.. .....+.|++.++|..+++++.+++++|.+++++++||++|+.
T Consensus 4 ~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~ 83 (385)
T PRK08574 4 GTDAVRGYRGSDPYGSLQPPIYLTALFRQEGEAYPSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFNSGMAAIST 83 (385)
T ss_pred cceeeecCCCCCCCCCccCCccCCcceecCcchhhcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHH
Confidence 34555544334567999999999999976542 1223477999999999999999999999999999999999985
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHH
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
++.+++++||+|+++.+.|.++...+... ...|+++..++. |.+++++++++ ++++|++++|+||+|.+.|+++|++
T Consensus 84 ~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~ 161 (385)
T PRK08574 84 LFFSLLKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAK 161 (385)
T ss_pred HHHHHhCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHH
Confidence 66778999999999999999987666443 678888888765 58899999987 8999999999999999999999999
Q ss_pred HHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHH
Q 022194 164 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (301)
Q Consensus 164 l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
+||++|+++|+|++|+.+....+...|+|+++.|++|+++|+++..+|+++++++.+.+++.......+..+++..++.+
T Consensus 162 la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~ 241 (385)
T PRK08574 162 AAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLV 241 (385)
T ss_pred HHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999999999999998877777788999999999999988877778877777777877777667777888999999999
Q ss_pred HcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhc
Q 022194 244 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVL 296 (301)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~ 296 (301)
+++++.+..|.++..+++.++.++|+++|.|..|.||+++++|+|.+++++++
T Consensus 242 l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 294 (385)
T PRK08574 242 LRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFG 294 (385)
T ss_pred HcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999986
No 19
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=2.2e-41 Score=301.19 Aligned_cols=291 Identities=34% Similarity=0.530 Sum_probs=254.9
Q ss_pred cceeeecCCCCCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHH
Q 022194 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMA 81 (301)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ 81 (301)
+|..++.+...+..|...+|++.+.+|..+... ....+.|+++++|..+++++.++++.|.+++++++||+.
T Consensus 17 ~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~~sG~~ 96 (403)
T PRK07810 17 ATIGVRGGLLRSGFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFATASGMS 96 (403)
T ss_pred chhheeCCCCCCCCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEECChHH
Confidence 456666653334568888999999987554421 224467999999999999999999999999999999998
Q ss_pred HHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 022194 82 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 82 ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
|+. ++..++++||+|++++..|++....+...++..|++++.++..|++++++++++++++|++++|+||+|.+.|+++
T Consensus 97 Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~ 176 (403)
T PRK07810 97 AVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAA 176 (403)
T ss_pred HHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCHHH
Confidence 885 6667899999999999888887766667788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhH
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
|+++||++|+++|+|++|+.+....+...|+|+++.|++|+++|+++..+|+++++++.+.+.++......+..+++..+
T Consensus 177 I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a 256 (403)
T PRK07810 177 VSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNA 256 (403)
T ss_pred HHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999998888778888999999999999987766678999988765655555555567788999999
Q ss_pred HHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 241 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+.++++++.+..|.++..+++.++.++|+++|.|..|.||+++++|+|.+++++.+++||
T Consensus 257 ~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~ 316 (403)
T PRK07810 257 WVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGT 316 (403)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence 999999999999999999999999999999999999999999999999999999988776
No 20
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=6.5e-41 Score=297.60 Aligned_cols=294 Identities=45% Similarity=0.791 Sum_probs=262.6
Q ss_pred CCccceeeecCCCCC-CCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHH
Q 022194 7 PGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~ 85 (301)
.+++|..++.+...+ ..|...+|++.+.++..+.......+.|++.++|..+++++.+++++|.++.+++++|+.|+.+
T Consensus 5 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~ 84 (390)
T PRK08064 5 YSIDTLLLHNQYKHDKQTGAVNVPIYHASTFHQFDFDTFGKYDYSRSGNPTREALEDIIAELEGGTKGFAFASGMAAIST 84 (390)
T ss_pred CCcccceeeCCCCCCCCCCCccCCcccCcceecCcccccCCCcccCCCChhHHHHHHHHHHHhCCCCeEEECCHHHHHHH
Confidence 345666777652222 3699999999999998777655567889999999999999999999999999999999999875
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~ 165 (301)
++.++++||+|+++++.|++....+...++..|++++.++..|++++++++++++++|++++|+||+|.+.|+++|.++|
T Consensus 85 ~l~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la 164 (390)
T PRK08064 85 AFLLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLA 164 (390)
T ss_pred HHHHhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHH
Confidence 55688999999999999998877777777889999999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHc
Q 022194 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (301)
Q Consensus 166 ~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
+++|+++|+|++|+.+....+.+.|+|+++.|+||+++|++++++|+++.+++.+.+.+.......+...++..++..++
T Consensus 165 ~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~ 244 (390)
T PRK08064 165 KAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLR 244 (390)
T ss_pred HHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 99999999999999887666777899999999999999998888999988877788888888887888889999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++.+..|.++..+++..+.++|+++|.|..+++|++++.|++++++++.+++||
T Consensus 245 gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg 299 (390)
T PRK08064 245 GLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGA 299 (390)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcce
Confidence 9999999999999999999999999999999999999999999999999888776
No 21
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=6e-41 Score=300.05 Aligned_cols=299 Identities=37% Similarity=0.591 Sum_probs=254.3
Q ss_pred CCCCCCCccceeeecCCCC-CCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCc
Q 022194 2 SVEEEPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADR 72 (301)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~ 72 (301)
+-.++.+.+|..++.+... +..|...+|++.+.+|..+... ....+.|++.++|..+.+++.++++.|.+.
T Consensus 2 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~ 81 (431)
T PRK08248 2 SEERTFRLETLAIHAGQEIDPTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIG 81 (431)
T ss_pred cccccCCcchhheeCCcCCCCCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCc
Confidence 3344455667788776322 3368999999999998765431 234567899999999999999999999999
Q ss_pred eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 73 ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 73 ~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
+++++||++|+. ++..++++||+|+++++.|++....+...++..|++++.++..|++++++++++++++|++++|+||
T Consensus 82 al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~tklV~l~sp~NP 161 (431)
T PRK08248 82 ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDKTKALFAETIGNP 161 (431)
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCCCeEEEEECCCCC
Confidence 999999999985 7778899999999999999988777777788999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhH-----------
Q 022194 152 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL----------- 220 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~----------- 220 (301)
||.+.|+++|+++|+++|+++|+|++++.+....+.+.|+|+++.|++|+++|++...+|+++.+.+..
T Consensus 162 tG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~ 241 (431)
T PRK08248 162 KGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLT 241 (431)
T ss_pred CCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCcccccccccccccc
Confidence 999999999999999999999999999877777777889999999999999887666677776543211
Q ss_pred ---------------------HHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEec
Q 022194 221 ---------------------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNY 279 (301)
Q Consensus 221 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~ 279 (301)
.+.........|..+++..++.++++++.+..|.+++.+++..+.++|+++|.|..|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~y 321 (431)
T PRK08248 242 EPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSY 321 (431)
T ss_pred CCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEEC
Confidence 11122345566889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHHhhhc-cCCC
Q 022194 280 AGLPEHPGHELHYSQVL-SDNG 300 (301)
Q Consensus 280 p~~~~~~~~~~~~~~~~-~~~~ 300 (301)
|+++++|+|.+++++.. +.||
T Consensus 322 Pgl~s~p~~~~~~~~~~~g~gg 343 (431)
T PRK08248 322 PGLPSHPSYELAKKYLPKGQGA 343 (431)
T ss_pred CCCCCCccHHHHHHhCcCCCce
Confidence 99999999999999984 4454
No 22
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=1.2e-40 Score=295.86 Aligned_cols=291 Identities=38% Similarity=0.689 Sum_probs=251.6
Q ss_pred ccceeeecCC-CCCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecch
Q 022194 9 VSTLLMNFSN-EFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (301)
Q Consensus 9 ~~~~~~~~~~-~~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG 79 (301)
++|..++.+. ..+..|...+|++.+.+|..+... ....|.|+++++|..+++++.+++++|.+.+++++||
T Consensus 4 ~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~sG 83 (391)
T TIGR01328 4 FATRAIHAGYPPKDQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATSSG 83 (391)
T ss_pred cccceeeCCccCCCCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEECCH
Confidence 4566777662 233468999999999999765431 2245789999999999999999999999999999999
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccH
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l 158 (301)
++|+. ++.+++++||+|+++++.|.+....+...+...|+++++++.+|++++++++++++++|++++|+||+|.+.|+
T Consensus 84 ~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl 163 (391)
T TIGR01328 84 MGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDNTKIVYFETPANPTMKLIDM 163 (391)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccCCeEEEEECCCCCCCcccCH
Confidence 98885 66678899999999999998887777777888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh--hhhcCCCCC
Q 022194 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLA 236 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (301)
++|+++|+++|+++|+|++|+.+....+...++|+++.|++|+++++++.++|+++.++ .+.++++.. ....+..++
T Consensus 164 ~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~-~li~~l~~~~~~~~~g~~l~ 242 (391)
T TIGR01328 164 ERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKA-ELLQQIRMVGIKDMTGSVIS 242 (391)
T ss_pred HHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCH-HHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999988777777889999999999999877666678887654 555555432 223456788
Q ss_pred HHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+..++.++.+++.+..++++..++++++.++|+++|.|..|.+|+++++|+|++++++++++||
T Consensus 243 ~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~ 306 (391)
T TIGR01328 243 PFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGG 306 (391)
T ss_pred cHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCc
Confidence 8999999999999999999999999999999999999999999999999999999999988776
No 23
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=2.1e-40 Score=294.84 Aligned_cols=293 Identities=34% Similarity=0.567 Sum_probs=252.7
Q ss_pred CccceeeecCCCCCCCCccccCeeecceeecCCC--------CCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecch
Q 022194 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG 79 (301)
++++..++.+...+..+...+|++.+.++..+.. .....+.|+++++|..+++++.+++++|.+..+++++|
T Consensus 10 ~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~~sG 89 (398)
T PRK07504 10 RPATRLVHSGTLRSQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARATASG 89 (398)
T ss_pred CcccceeeCCCCCCCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEecCH
Confidence 3456677766323456888899999988765432 12345778899999999999999999999988999999
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccH
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l 158 (301)
+.|+. ++..++++||+|+++++.|+++...+...++..|++++.++..|++++++++++++++|++++|+||+|.+.|+
T Consensus 90 ~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl 169 (398)
T PRK07504 90 MAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDI 169 (398)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEecCH
Confidence 98885 56678999999999999999887666666778899999999889999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHH
Q 022194 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 238 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
++|.++|+++|+++|+|++|+.+....+...|+|+++.|++|+++|++...+|+++.+++.+.+.++......+..+++.
T Consensus 170 ~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~ 249 (398)
T PRK07504 170 AAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPF 249 (398)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999988777777889999999999999776555567888776655554555555667889999
Q ss_pred hHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 239 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
.++.++++++.+..|.++..++++.+.++|+++|.|..|+|||++++|+|.+++++++++||
T Consensus 250 ~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~ 311 (398)
T PRK07504 250 NAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGST 311 (398)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999988776
No 24
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.2e-40 Score=294.22 Aligned_cols=294 Identities=25% Similarity=0.438 Sum_probs=260.5
Q ss_pred CCccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEec
Q 022194 7 PGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (301)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~ 77 (301)
...+|..++.+.. .+..|...+|++.+.+|..+... +...+.|+++++|..+++++.++++.|.+.+++++
T Consensus 8 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~~ 87 (394)
T PRK07050 8 RALQTRIVQPDDQIPPGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQP 87 (394)
T ss_pred CCccchheECCCCCCCCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEec
Confidence 3455777776622 34468999999999999765531 23457899999999999999999999999999999
Q ss_pred chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 78 sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
||++|+. ++..++++||+|+++++.|..+...+...+...|+++..++..+.+++++++++++++|++++|+||+|...
T Consensus 88 sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~ 167 (394)
T PRK07050 88 SGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVP 167 (394)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccHh
Confidence 9999986 666789999999999999999876666677888999999988778889999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCC
Q 022194 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
++++|+++|+++|+++|+|++|..+....+...|+|+++.|++|+++|+.++++|+++++++.+.++++......|.+++
T Consensus 168 di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~ 247 (394)
T PRK07050 168 DVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVS 247 (394)
T ss_pred hHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999998888888899999999999999888888999998888888888877777888999
Q ss_pred HHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+..++.++++++.+..|.++..+++.++.++|+++|.|..+++|+++++|++..++++..+.||
T Consensus 248 ~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~ 311 (394)
T PRK07050 248 ADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGG 311 (394)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCce
Confidence 9999999999999999999999999999999999999999999999999999999988766554
No 25
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=291.89 Aligned_cols=287 Identities=34% Similarity=0.575 Sum_probs=248.1
Q ss_pred ccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHH
Q 022194 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVT 87 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~ 87 (301)
.+|..++.+ ..+..|...+|++.+.+|..+.. ..+.|++.++|..+++++.+++++|.+..+++++|++|+. ++.
T Consensus 3 ~~t~~~~~~-~~~~~~~~~~pi~~~~~~~~~~~---~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~ 78 (376)
T PRK06460 3 DATRTVRED-IDEATGAITTPIYQTTAYHYPEG---EKYRYSREANPTVLELTKKIVELENAEMGVAFSSGMGAISTTAL 78 (376)
T ss_pred cceeeeecC-CCCCCCCccCCccCCcceeeCCC---CCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHH
Confidence 456667766 34556889999999999977652 3678999999999999999999999998999999999986 567
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~ 167 (301)
.++++||+|+++.+.|.+....+...++..|+++..++.++.+.+++.+++++++|++++|+||+|.+.|+++|+++|++
T Consensus 79 al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~ 158 (376)
T PRK06460 79 ALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKE 158 (376)
T ss_pred HHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 78999999999998887766666677788899999998877666776667789999999999999999999999999999
Q ss_pred cCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc
Q 022194 168 HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (301)
Q Consensus 168 ~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (301)
+|+++|+|++|+.+....+...++|+++.|+||+++|+++.++|+++.+ +.+.+.+.......+..+++..++.+++++
T Consensus 159 ~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~-~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~ 237 (376)
T PRK06460 159 NGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGY-GKLLNVIDQMRRTLGTSLDPHAAYLTLRGI 237 (376)
T ss_pred cCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecC-HHHHHHHHHHHHhcCCCCCHHHHHHHHhch
Confidence 9999999999987655555566899999999999987777889998876 456677766666677778888888888999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 248 KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+.+..+++++.++++++.++|+++|.|..|++|+|+++|+|++++++.++.||
T Consensus 238 ~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg 290 (376)
T PRK06460 238 KTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGG 290 (376)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence 99999999999999999999999999999999999999999999999988776
No 26
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.2e-40 Score=294.34 Aligned_cols=293 Identities=32% Similarity=0.505 Sum_probs=252.9
Q ss_pred CccceeeecCCCCCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecch
Q 022194 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG 79 (301)
.++|..++.+...+..|...+|++.+.+|..+... ....+.|++.++|.++++++.++++.|.+.+++++||
T Consensus 6 ~~~t~~~~~g~~~~~~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~~SG 85 (432)
T PRK06702 6 GKGTICVQGGYTPKNGEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVATASG 85 (432)
T ss_pred CcchHheeCCCCCCCCCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEECCH
Confidence 45677777762233468999999999999765521 1234668888999999999999999999999999999
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-CHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
++|+. ++.+++++||+|+++.+.|.++...+...+...|+++.+++.. |++.+++++++++++|++++|.||++.+.|
T Consensus 86 ~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D 165 (432)
T PRK06702 86 QAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDKTKLVYAESLGNPAMNVLN 165 (432)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcCCeEEEEEcCCCccccccC
Confidence 99996 6677899999999999999988877666678899999999985 899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcch---------hH--------
Q 022194 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE---------RL-------- 220 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~---------~~-------- 220 (301)
+++|+++|+++|+++|+|++++.+....+.+.|+|+++.|++|+++|+.+.++|+++.... .+
T Consensus 166 i~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~ 245 (432)
T PRK06702 166 FKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYH 245 (432)
T ss_pred HHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccccccccccc
Confidence 9999999999999999999999988889999999999999999999999988988874221 11
Q ss_pred --------------HHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCc
Q 022194 221 --------------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 286 (301)
Q Consensus 221 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~ 286 (301)
.+.........+..+++..++.++++++.+..|.++..+|+..+.++|+++|.|..|.+|+++++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p 325 (432)
T PRK06702 246 GVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNE 325 (432)
T ss_pred ccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCc
Confidence 111223344567889999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHhhh-ccCCC
Q 022194 287 GHELHYSQV-LSDNG 300 (301)
Q Consensus 287 ~~~~~~~~~-~~~~~ 300 (301)
+|.++++++ ++.||
T Consensus 326 ~~~l~~~~~~~g~gg 340 (432)
T PRK06702 326 NYSLAQKYLKKGASG 340 (432)
T ss_pred cHHHHHHhCcCCCce
Confidence 999999999 55554
No 27
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=5.1e-40 Score=292.86 Aligned_cols=293 Identities=40% Similarity=0.657 Sum_probs=252.1
Q ss_pred CCccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEec
Q 022194 7 PGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (301)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~ 77 (301)
...+|..++.+.. .+..|...+|++.+.+|..+... ....+.|+++++|..+++++.+++++|.+..++++
T Consensus 8 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 8 TGFSTRAIHHGYDPLDHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred CCccchheeCCCCCCCCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 3455677776622 33469999999999999765431 22457789999999999999999999999999999
Q ss_pred chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 78 sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
||++|+. ++..++++||+|+++.+.|......+...+...|++++.++.+|++.+++++++++++|++++|+||+|.+.
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~ 167 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISDKTRMVYFETPANPNMRLV 167 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCccCcEEEEeCCCCCCCeee
Confidence 9999985 556788999999999999987766565667789999999999999999999998999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHH--hhhhcCCC
Q 022194 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--LQNAEGSG 234 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~--~~~~~~~~ 234 (301)
|+++|.++|+++|+++|+|++|+.+....+...++|+++.|++|+++|++++++|+++.+ +.+.++++. .....+..
T Consensus 168 di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~-~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 168 DIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGG-KALADRIRLEGLKDMTGAV 246 (403)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcC-HHHHHHHHhhhHHhCcCCC
Confidence 999999999999999999999998776677778899999999999987777889999854 556666553 24445678
Q ss_pred CCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++..++.++++++.+..+.++..+++..+.++|+++|.|..|.+|++.++|.|.+++++.++.||
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~ 312 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGG 312 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCc
Confidence 899999999999999999999999999999999999999999999999999999999999877665
No 28
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=5.6e-40 Score=290.48 Aligned_cols=277 Identities=55% Similarity=0.887 Sum_probs=248.0
Q ss_pred CccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCC
Q 022194 24 GALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGE 94 (301)
Q Consensus 24 g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~ 94 (301)
|...+|++.+.+|..+... ....+.|+++++|..+++++.+++++|.+++++++||++|+. ++..++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 4567899999998765532 234577899899999999999999999999999999999986 6667889999
Q ss_pred eEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 95 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 95 ~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
+|+++.+.|++....+...++..|+++..++.+|++++++++++++++|++++|+||+|.+.|+++|+++|+++|+++|+
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~liv 160 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVV 160 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEE
Confidence 99999999999887776777888999999999999999999988999999999999999999999999999999999999
Q ss_pred eCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHH
Q 022194 175 DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRV 254 (301)
Q Consensus 175 D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 254 (301)
|++|+.+....+...++|+++.|++|+++|++++++|+++++++.+.+++.......+..+++..+++++++++.+..+.
T Consensus 161 D~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r~ 240 (369)
T cd00614 161 DNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLRM 240 (369)
T ss_pred ECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHHH
Confidence 99999888777788899999999999998877788999999875677777776666788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++.++++++.++|++++.|..|.+|+++++|+|++++++.++.||
T Consensus 241 ~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~ 286 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGG 286 (369)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCce
Confidence 9999999999999999999999999999999999999999877665
No 29
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=6.4e-40 Score=291.27 Aligned_cols=291 Identities=38% Similarity=0.651 Sum_probs=251.1
Q ss_pred ccceeeecCCCCCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchH
Q 022194 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~ 80 (301)
++|..++.+...+..|...+|++.+.++..+... ....+.|+++++|..+++++.+++++|.+++++++||+
T Consensus 7 ~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~ssG~ 86 (390)
T PRK08133 7 FDTLAVRAGQLRSPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVATASGM 86 (390)
T ss_pred cchhheeCCCCCCCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEECCHH
Confidence 4566677663345578888999999988654421 12346788889999999999999999999999999999
Q ss_pred HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 022194 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 81 ~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~ 159 (301)
+|+. ++.+++++||+|+++++.|.+....+...+...|++++.++.+|.+++++++++++++|++++|+||+|.+.|++
T Consensus 87 ~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~ 166 (390)
T PRK08133 87 AAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADIA 166 (390)
T ss_pred HHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCHH
Confidence 9985 667789999999999999998887776777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHh
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 239 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
+|+++|+++|+++|+|++++.+....+...|+|+++.|+||++++++...+|+++.+++ +.+.+.......+..+++..
T Consensus 167 ~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~-~~~~~~~~~~~~g~~~~~~~ 245 (390)
T PRK08133 167 ALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKE-LMEEVFGFLRTAGPTLSPFN 245 (390)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHH-HHHHHHHHHHHhCCCCCHHH
Confidence 99999999999999999998887777777899999999999997655445688877654 44555555566677889999
Q ss_pred HHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 240 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
++.++++++.+..|.+++.+++..+.++|+++|.|..+++|++++.|+|++++++.+++||
T Consensus 246 a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~ 306 (390)
T PRK08133 246 AWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGA 306 (390)
T ss_pred HHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCce
Confidence 9999999999999999999999999999999999999999999999999999999987776
No 30
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=8e-40 Score=290.37 Aligned_cols=276 Identities=34% Similarity=0.569 Sum_probs=238.8
Q ss_pred CccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCC
Q 022194 24 GALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGE 94 (301)
Q Consensus 24 g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~ 94 (301)
|...+|++.+.+|..+... ....|.|++.|+|..+++++.++++.|.+.++++++|++|+. ++..++++||
T Consensus 8 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~Gd 87 (397)
T PRK05939 8 GAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAGD 87 (397)
T ss_pred CCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCCC
Confidence 7889999999998765421 223578999999999999999999999999999999999986 6667899999
Q ss_pred eEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 95 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 95 ~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
+|+++++.|+++...+. .++..|++++.++..|.+++++++++++++|++++|+||+|.+.|+++|+++||++|+++|+
T Consensus 88 ~Vv~~~~~y~~t~~~~~-~l~~~G~~v~~v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~liv 166 (397)
T PRK05939 88 HLVSSQFLFGNTNSLFG-TLRGLGVEVTMVDATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVV 166 (397)
T ss_pred EEEECCCccccHHHHHH-HHHhcCCEEEEECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEE
Confidence 99999999988876663 35678999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcch--------h-------------HHHHHHHhhhhcCC
Q 022194 175 DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------R-------------LAKELYFLQNAEGS 233 (301)
Q Consensus 175 D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~--------~-------------~~~~~~~~~~~~~~ 233 (301)
|++++.+...++...|+|+++.|+||+++|+++.++|+++.+.. . +.+.........|.
T Consensus 167 D~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 246 (397)
T PRK05939 167 DNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGA 246 (397)
T ss_pred ECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCC
Confidence 99998877667888899999999999998887776776653221 0 01111122335688
Q ss_pred CCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 234 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
.+++..++.++++++.+..|.+++.+|+..+.++|+++|.|..|++|+++++|+|+++++++++.||
T Consensus 247 ~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~ 313 (397)
T PRK05939 247 TLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGG 313 (397)
T ss_pred CCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCce
Confidence 8999999999999999999999999999999999999999999999999999999999999987776
No 31
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=2.2e-39 Score=285.72 Aligned_cols=288 Identities=36% Similarity=0.538 Sum_probs=247.1
Q ss_pred ccceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
.+|..++.+.. .+..|...+|++.+.+|..+.......+.|+++++|...++++.++++. .++++++++|++|+. ++
T Consensus 4 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l 82 (366)
T PRK07582 4 DGTRSVHAGGPEAVPGEPVLPGPVFAAPYHLSPGEPTGPDTYGRASNPTWRALEAALGELE-GAEALVFPSGMAAITAVL 82 (366)
T ss_pred cccceeeCCCCCCCCCCCccCCccccceEEccCccccCCceeECCCCccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHH
Confidence 44566665522 2336899999999999976643333457799999999999999999999 678999999999885 66
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
.+++++||+|+++++.|+++...+...++..|++++.++.++... .+.+++++|++++|+||+|.+.|+++|+++|+
T Consensus 83 ~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~ 159 (366)
T PRK07582 83 RALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALAGADLVLAETPSNPGLDVCDLAALAAAAH 159 (366)
T ss_pred HHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---HhccCceEEEEECCCCCCCCccCHHHHHHHHH
Confidence 678999999999999999887655555677899999999765432 33468999999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc
Q 022194 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (301)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (301)
++|+++++|++|..+....+...++|+++.|++|+++|++|+++|+++.+++.+.+.+.......+..+++..++.++++
T Consensus 160 ~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~ 239 (366)
T PRK07582 160 AAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRS 239 (366)
T ss_pred HcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 99999999999976555556677899999999999999999999999987777878777777777888899999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 247 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 247 l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
++.+..+.++..+++..+.++|+++|.|..|.+|+++++|+|.+++++.++.||
T Consensus 240 l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg 293 (366)
T PRK07582 240 LGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGG 293 (366)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcc
Confidence 999999999999999999999999999999999999999999999999988876
No 32
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.7e-39 Score=289.46 Aligned_cols=291 Identities=40% Similarity=0.645 Sum_probs=251.9
Q ss_pred ccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecch
Q 022194 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (301)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG 79 (301)
.+|..++.+.. .+..|...+|++.+.++..+... +...+.|+++++|...+|++.+++++|.+++++++||
T Consensus 9 ~~t~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~sG 88 (400)
T PRK06234 9 FATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAASG 88 (400)
T ss_pred ccchheECCCCCCCCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEEcCH
Confidence 45666776522 34468899999999998765532 1344669999999999999999999999999999999
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccH
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l 158 (301)
++|+. ++..++++||+|++++|.|+.+...+...++..|++++.++..|++++++++++++++|++++|+||+|.+.|+
T Consensus 89 ~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl 168 (400)
T PRK06234 89 MGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKANTKVVYLETPANPTLKVTDI 168 (400)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCCH
Confidence 98885 66778999999999999999887766667788999999999999999999999899999999999999999999
Q ss_pred HHHHHHHHHc--CCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh--hhhcCCC
Q 022194 159 RKIAEMAHAH--GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSG 234 (301)
Q Consensus 159 ~~l~~l~~~~--~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~ 234 (301)
++|.++|+++ |+++|+|++|+.+....+...++|+++.|++|+++|++..++|+++++++ +.+.++.. ....+..
T Consensus 169 ~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~-~~~~l~~~~~~~~~g~~ 247 (400)
T PRK06234 169 KAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEE-FINQVKLFGIKDMTGSV 247 (400)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHH-HHHHHHHHHHHHhcCCC
Confidence 9999999997 99999999999887777777799999999999998766566799988754 55655432 3345788
Q ss_pred CCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++..++..+++++.+..+.+++.++++++.++|+++|.|..|++|+++++|+|.+++++.++.||
T Consensus 248 l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~ 313 (400)
T PRK06234 248 IGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGA 313 (400)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCc
Confidence 899999999999999999999999999999999999999999999999999999999999987776
No 33
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=1.8e-39 Score=290.67 Aligned_cols=293 Identities=31% Similarity=0.551 Sum_probs=248.6
Q ss_pred CCccceeeecCCCCCC-CCccccCeeecceeecCCCCC------------------CCCccccCCCCchHHHHHHHHHhh
Q 022194 7 PGVSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSATE------------------NGPYDYTRSGNPTRDALESLLAKL 67 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~~p~~~~~~~~~~~~~~------------------~~~~~y~~~g~~~~~~l~~~l~~~ 67 (301)
...+|..++.+...+. .|...+|++.+++|..+.... ...+.|+++++|....|++.++++
T Consensus 16 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 16 LHPETQMLNYGYDPELSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred CCcccceeeCCCCCCCCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 3445677776622233 699999999999997654210 123678999999999999999999
Q ss_pred cCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEec-CCCHHHHHhhcC-----CCc
Q 022194 68 DKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIG-----PWT 140 (301)
Q Consensus 68 ~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~l~-----~~~ 140 (301)
.+.++++++++|++|+. ++.+++++||+|++++|.|+++...+...++..|++++.++ ..|.+++++.+. +++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 99999999999999985 66788999999999999999998666566677898855554 347777776663 578
Q ss_pred eEEEEeCCCCCccccccHHHHHHHHHH------cCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEE
Q 022194 141 KLVWVESPTNPRQQICDIRKIAEMAHA------HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLA 214 (301)
Q Consensus 141 ~~v~i~~~~np~G~~~~l~~l~~l~~~------~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~ 214 (301)
++|++++|+||||.+.++++|.++++. +++++|+|++|.......+...++|+++.|+||+++|++|+|+|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999987 89999999999877666777788999999999999888999999998
Q ss_pred EcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCC--CCCcchHHHH
Q 022194 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL--PEHPGHELHY 292 (301)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~--~~~~~~~~~~ 292 (301)
.+ +.+.+.+.......+..+++..+++++++++.+..++++..++++.+.++|+++|.|..|.||++ +++|+|.+++
T Consensus 256 ~~-~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~ 334 (427)
T PRK07049 256 GR-KALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYK 334 (427)
T ss_pred CC-HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHH
Confidence 76 45777777777777888999999999999999999999999999999999999999999999986 9999999999
Q ss_pred hhhccCCC
Q 022194 293 SQVLSDNG 300 (301)
Q Consensus 293 ~~~~~~~~ 300 (301)
++.++.||
T Consensus 335 ~~~~g~g~ 342 (427)
T PRK07049 335 RQCTGAGS 342 (427)
T ss_pred hhCCCCcc
Confidence 99977776
No 34
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2e-39 Score=290.09 Aligned_cols=300 Identities=36% Similarity=0.544 Sum_probs=254.9
Q ss_pred CCCCCCCCccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCC
Q 022194 1 MSVEEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKAD 71 (301)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~ 71 (301)
|-.|.+...+|..++.+.. .+..|...+|++.+.+|..+... ....+.|++.++|..+++++.++++.|.+
T Consensus 1 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~ 80 (433)
T PRK08134 1 MPGMSPPGFDTLALHAGAAPDPATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGV 80 (433)
T ss_pred CCCCCCCCcchhheeCCCCCCCCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCC
Confidence 5567777788888887632 33468999999999999765531 23457899999999999999999999999
Q ss_pred ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 72 RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 72 ~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.+++++||++|+. ++..++++||+|++++..|.++...+...++..|+++++++.+|++++++++++++++|++++++|
T Consensus 81 ~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~TklV~~e~~~n 160 (433)
T PRK08134 81 GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPNTRLLFGETLGN 160 (433)
T ss_pred cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCc
Confidence 9999999999996 566789999999999999998876665666789999999999999999999999999999999999
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcch------------
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE------------ 218 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~------------ 218 (301)
|+|.+.|+++|+++||++|+++|+|++++.+....+...|+|+++.|.+|+++|++...+|+++....
T Consensus 161 p~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~ 240 (433)
T PRK08134 161 PGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPEL 240 (433)
T ss_pred ccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccc
Confidence 99999999999999999999999999999998888888899999999999998877766777664211
Q ss_pred -------------------hH-HHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEe
Q 022194 219 -------------------RL-AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVN 278 (301)
Q Consensus 219 -------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~ 278 (301)
.+ .+.........+..+++..++.++++++.+..|.++..+++.++.++|+++|.|..|.
T Consensus 241 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~ 320 (433)
T PRK08134 241 TEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVA 320 (433)
T ss_pred cCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 00 0001112234567899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcchHHHHhhh-ccCCC
Q 022194 279 YAGLPEHPGHELHYSQV-LSDNG 300 (301)
Q Consensus 279 ~p~~~~~~~~~~~~~~~-~~~~~ 300 (301)
+|++.++|+|.++++++ ++.||
T Consensus 321 yP~l~~~p~~~~~~~~~~~g~gg 343 (433)
T PRK08134 321 HPELESHPDHALAKRLLPRGAGS 343 (433)
T ss_pred CCCCCCCccHHHHHHhCCCCCce
Confidence 99999999999999998 44554
No 35
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=3.4e-39 Score=286.10 Aligned_cols=288 Identities=41% Similarity=0.661 Sum_probs=247.4
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai 83 (301)
..++.+...+..+...+|++.+.+|..+... ....+.|+++++|..+++++.+++++|.+.+++++||++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~sG~~Ai 82 (380)
T TIGR01325 3 LAIRGGKERTEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATATGMSAI 82 (380)
T ss_pred eeEECCCCCCCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECCHHHHH
Confidence 3444442234457788899999988654421 23457788999999999999999999999999999999998
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
. ++..++++||+|+++.+.|.+....+...++..|+++..++.+|++++++++++++++|++++|+||+|.+.|+++|.
T Consensus 83 ~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~ 162 (380)
T TIGR01325 83 QAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALA 162 (380)
T ss_pred HHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHH
Confidence 5 666788999999999999988776666777889999999999999999999988999999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHH
Q 022194 163 EMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (301)
Q Consensus 163 ~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
++||++|+++|+|++|+.+....+...|+|+++.|++|+++|++..++|++++++ .+.+.+.......+..+++..++.
T Consensus 163 ~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~-~~~~~l~~~~~~~g~~~~p~~a~~ 241 (380)
T TIGR01325 163 ELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSE-ELMAEVAVYLRHTGPAMSPFNAWV 241 (380)
T ss_pred HHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCH-HHHHHHHHHHHhhCCCCCHHHHHH
Confidence 9999999999999999887777777889999999999999776555678888765 455656655556777888999999
Q ss_pred HHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
++++++.+..+.++..++++.+.++|+++|.|..|.+|+++++|+|.+++++.+++||
T Consensus 242 ~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~ 299 (380)
T TIGR01325 242 LLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGT 299 (380)
T ss_pred HHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence 9999999999999999999999999999999999999999999999999999987776
No 36
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=3.3e-39 Score=288.59 Aligned_cols=291 Identities=38% Similarity=0.602 Sum_probs=246.8
Q ss_pred cceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchH
Q 022194 10 STLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (301)
Q Consensus 10 ~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~ 80 (301)
+|..++.+.. .+..|...+|++.+.+|..+... ....|.|++.++|..+++++.++++.|.+.+++++||+
T Consensus 4 ~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~ssG~ 83 (425)
T PRK06084 4 ETLAIHAGYSPDPTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVASGM 83 (425)
T ss_pred chhheeCCcCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEehhHH
Confidence 3555555411 33358899999999998765531 22357899999999999999999999999999999999
Q ss_pred HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 022194 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 81 ~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~ 159 (301)
+|+. ++.+++++||+|+++.+.|++....+...+...|+++.+++..|++++++++++++++|++++|+||+|.+.|++
T Consensus 84 ~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~ 163 (425)
T PRK06084 84 AAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIIDIQ 163 (425)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCHH
Confidence 9986 667789999999999999998776666666778899999998899999999998999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchh-HH-----------------
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LA----------------- 221 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~-~~----------------- 221 (301)
+|.++|+++|+++|+|++++.+....+...|+|+++.|++|+++|++...+|+++.++.. ..
T Consensus 164 ~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (425)
T PRK06084 164 ALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYH 243 (425)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccc
Confidence 999999999999999999998888888888999999999999998887778877754321 00
Q ss_pred ---------------HHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCc
Q 022194 222 ---------------KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 286 (301)
Q Consensus 222 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~ 286 (301)
+.........+..+++..++.++++++.+..|.++..+++.++.++|+++|.|..|++|+++++|
T Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p 323 (425)
T PRK06084 244 GVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHP 323 (425)
T ss_pred cchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcc
Confidence 00112234567889999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHhhhcc-CCC
Q 022194 287 GHELHYSQVLS-DNG 300 (301)
Q Consensus 287 ~~~~~~~~~~~-~~~ 300 (301)
+|.+++++..+ .||
T Consensus 324 ~~~~~~~~~~g~~gg 338 (425)
T PRK06084 324 EHELARRYMGGKPAS 338 (425)
T ss_pred cHHHHHHhCCCCcce
Confidence 99999999877 454
No 37
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4e-39 Score=287.85 Aligned_cols=292 Identities=38% Similarity=0.565 Sum_probs=248.4
Q ss_pred ccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecch
Q 022194 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (301)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG 79 (301)
++|..++.+.. .+..|...+|++.+.+|..+... ....+.|++.++|..+++++.++++.|.+.+++++||
T Consensus 14 ~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~sSG 93 (436)
T PRK07812 14 FETKQIHAGQTPDPATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLASG 93 (436)
T ss_pred cchhheeCCCCCCCCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEccH
Confidence 44566666522 23368999999999998765421 2234678999999999999999999999999999999
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEec-CCCHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
++|+. ++.+++++||+|+++...|.+....+...+...|+++..++ .+|++.+++++++++++|++++++||+|.+.|
T Consensus 94 ~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D 173 (436)
T PRK07812 94 QAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPNTKAFFAETISNPQIDVLD 173 (436)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCCCeEEEEECCCCCCCeecC
Confidence 99985 77788999999999999998887666666778899999996 56899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcch-------------------
Q 022194 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE------------------- 218 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~------------------- 218 (301)
+++|+++||++|+++|+|++++.+....+...|+|+++.|++|+++|+++..+|.++.+..
T Consensus 174 l~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~ 253 (436)
T PRK07812 174 IPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYH 253 (436)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccc
Confidence 9999999999999999999999888888888899999999999998888877887775321
Q ss_pred ----------h-HHHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcc
Q 022194 219 ----------R-LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 287 (301)
Q Consensus 219 ----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~ 287 (301)
. +.+.........|..+++..++.++++++.+..|.++..+++..+.++|+++|.|..|++|+++++|.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~ 333 (436)
T PRK07812 254 GVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPW 333 (436)
T ss_pred cchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCcc
Confidence 0 01112234445688999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhh-ccCCC
Q 022194 288 HELHYSQV-LSDNG 300 (301)
Q Consensus 288 ~~~~~~~~-~~~~~ 300 (301)
|.+++++. ++.||
T Consensus 334 ~~~~~~~~~~g~gg 347 (436)
T PRK07812 334 YERAKRLAPKGTGA 347 (436)
T ss_pred HHHHHHhCcCCCce
Confidence 99999998 44554
No 38
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=270.03 Aligned_cols=294 Identities=40% Similarity=0.622 Sum_probs=262.5
Q ss_pred CCCccceeeecCCCCCC-CCccccCeeecceeecCCC--------CCCCCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 022194 6 EPGVSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (301)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~g~~~~p~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~ 76 (301)
+.+.+|..++-+ .+|. -|....|++.++.|..... .+..++-|+|.++|+.+.++++++.+-|.-.++.+
T Consensus 5 ~~~f~T~~vHag-~~d~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 5 NWGFETLAVHAG-QEDPTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred ccCcchhhhcCC-CCCCCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 467788899988 4465 8999999999999887553 35568889999999999999999999988889999
Q ss_pred cchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccc
Q 022194 77 TSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 77 ~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~ 155 (301)
.||++|+ .++..++++||+|+.+.-.|++....+...++..|+++++++.+|++.+++++++++|+|+++...||.+.+
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~~~v 163 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDV 163 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcccceEEEEeccCCCccc
Confidence 9999998 599999999999999999999999888888999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhH---------------
Q 022194 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL--------------- 220 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~--------------- 220 (301)
.|++.|+++||++|+++|+|.+++.+.+..|.+.|+|+++.|.+|+++|.+-.++|+++-....-
T Consensus 164 ~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p 243 (426)
T COG2873 164 LDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDP 243 (426)
T ss_pred cCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCc
Confidence 99999999999999999999999999999999999999999999999998877788887542110
Q ss_pred -------H----------HHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCC
Q 022194 221 -------A----------KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 283 (301)
Q Consensus 221 -------~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~ 283 (301)
. +.......-.|..++|..++.++++++.+..|.+++++|+..+.++|++||.|.+|+||||+
T Consensus 244 ~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~ 323 (426)
T COG2873 244 SYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLA 323 (426)
T ss_pred cccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCC
Confidence 0 11112334467889999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHhhhccCCC
Q 022194 284 EHPGHELHYSQVLSDNG 300 (301)
Q Consensus 284 ~~~~~~~~~~~~~~~~~ 300 (301)
++|.|.++++++.++.|
T Consensus 324 ~~~~h~la~kyl~~g~g 340 (426)
T COG2873 324 SHPYHALAKKYLPKGAG 340 (426)
T ss_pred CCcchhHHHhhccCCCc
Confidence 99999999999766654
No 39
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.2e-38 Score=283.05 Aligned_cols=290 Identities=38% Similarity=0.625 Sum_probs=248.6
Q ss_pred CCCCccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEE
Q 022194 5 EEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALC 75 (301)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~ 75 (301)
+....+|..++.+.. .++.|...+|++.+.+|..+... ....+.|+++++|..++|++.+++++|.+++++
T Consensus 2 ~~~~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~ 81 (386)
T PRK06767 2 KKKHMETALIHHGYTSEEHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALA 81 (386)
T ss_pred CCCCcccceeeCCCCCCCCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEE
Confidence 344566778887633 23468999999999999765521 224577999999999999999999999999999
Q ss_pred ecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccc
Q 022194 76 FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (301)
Q Consensus 76 ~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~ 154 (301)
++||++|+. ++..++++||+|+++++.|......+....+..|+++..++..|++++++++++++++|++++|+||+|.
T Consensus 82 ~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~tklV~lesp~NptG~ 161 (386)
T PRK06767 82 FGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPNTKLIFVETPINPTMK 161 (386)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcCceEEEEeCCCCCCce
Confidence 999998885 6667899999999999999888776666677788999888888999999999989999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCC
Q 022194 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (301)
Q Consensus 155 ~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
+.|+++|.++|+++|+++|+|++|+.+....+...|+|+++.|++|+++|+++.++|+++++++.+.+..+......+..
T Consensus 162 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 162 LIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999988877777788999999999999988776667999988765555445555666777
Q ss_pred CCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++..+++.+.+++.+..+.++..++++++.++|+++|.|..+.+| ++.+++++.++.||
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg 301 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGG 301 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCc
Confidence 8899899999999999999999999999999999999999999998 68888888887776
No 40
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-38 Score=285.56 Aligned_cols=294 Identities=38% Similarity=0.580 Sum_probs=249.0
Q ss_pred CCccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEec
Q 022194 7 PGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (301)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~ 77 (301)
+.+++..++.+.. .++.|...+|++.+.+|..+... ....+.|++.++|...++++.++++.|.+.+++++
T Consensus 6 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~~ 85 (427)
T PRK05994 6 PGFATLAVHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAVA 85 (427)
T ss_pred CCcchhheECCcCCCCCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 3455777776622 33458889999999998654421 12346788988999999999999999999999999
Q ss_pred chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 78 sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
||++|+. ++.+++++||+|+++.+.|++....+...+...|+++++++..|++++++++++++++|++++|+||+|.+.
T Consensus 86 SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~vesp~NptG~v~ 165 (427)
T PRK05994 86 SGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITPRTKAIFIESIANPGGTVT 165 (427)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeec
Confidence 9999985 666789999999999999998876666667889999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcch-h----------------
Q 022194 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-R---------------- 219 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~-~---------------- 219 (301)
|+++|+++|+++|+++|+|++++.+....+...|+|+++.|++|+++|+.+..+|+++.... .
T Consensus 166 dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~ 245 (427)
T PRK05994 166 DIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPE 245 (427)
T ss_pred CHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcch
Confidence 99999999999999999999999888888888999999999999999888887888774221 0
Q ss_pred -----HHH----------HHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCC
Q 022194 220 -----LAK----------ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 284 (301)
Q Consensus 220 -----~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~ 284 (301)
+.+ .........|..+++..++.++++++.+..|.++..+++..+.++|+++|.|..|++|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~ 325 (427)
T PRK05994 246 YHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPD 325 (427)
T ss_pred hhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111 01112334577899999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHhhh-ccCCC
Q 022194 285 HPGHELHYSQV-LSDNG 300 (301)
Q Consensus 285 ~~~~~~~~~~~-~~~~~ 300 (301)
+|.|.+++++. +++||
T Consensus 326 ~~~~~~~~~~~~~g~g~ 342 (427)
T PRK05994 326 DPYHALAQKYSPKGAGA 342 (427)
T ss_pred CccHHHHHHhcCCCceE
Confidence 99999999996 44454
No 41
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.4e-38 Score=284.41 Aligned_cols=292 Identities=36% Similarity=0.522 Sum_probs=247.7
Q ss_pred ccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecch
Q 022194 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (301)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG 79 (301)
++|..++.+.. .++.|...+|++.+++|..+... ....+.|++.++|..+++++.++++.|.+..++++||
T Consensus 14 ~~t~~~~~~~~~~~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~fsSG 93 (437)
T PRK05613 14 FETRSIHAGQSVDSDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAFASG 93 (437)
T ss_pred cchHheeCCCCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEeCCH
Confidence 44666666522 23468999999999999765521 2335779999999999999999999999999999999
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEec-CCCHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
++|+. ++..++++||+|++++..|+++...+...++..|+++.+++ ..|++.+++++++++++|+++++.||+|.+.|
T Consensus 94 ~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d 173 (437)
T PRK05613 94 QAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANPQADVLD 173 (437)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCCCCcccC
Confidence 98885 66778899999999999999986666667788999999997 55899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchh------------------
Q 022194 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------------ 219 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~------------------ 219 (301)
+++|+++||++|+++|+|.+++.+....+...|+|+++.|++|+++|++...+|+++.+.+.
T Consensus 174 i~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~ 253 (437)
T PRK05613 174 IPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTP 253 (437)
T ss_pred HHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCC
Confidence 99999999999999999999998887888888999999999999987766668888754220
Q ss_pred -----------------HHHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCC
Q 022194 220 -----------------LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 282 (301)
Q Consensus 220 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~ 282 (301)
..+.........|..+++..+|.++++++.+..|.++..+++..+.++|+++|.|..|.+|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl 333 (437)
T PRK05613 254 DPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGL 333 (437)
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCC
Confidence 001122344567889999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHhhh-ccCCC
Q 022194 283 PEHPGHELHYSQV-LSDNG 300 (301)
Q Consensus 283 ~~~~~~~~~~~~~-~~~~~ 300 (301)
+++|+|++++++. ++.||
T Consensus 334 ~~~p~~~~~~~~~~~g~gg 352 (437)
T PRK05613 334 KDSPWYATKEKLGLKYTGS 352 (437)
T ss_pred CCCccHHHHHHhcCCCCce
Confidence 9999999999996 44454
No 42
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=5.5e-38 Score=277.20 Aligned_cols=275 Identities=44% Similarity=0.747 Sum_probs=241.9
Q ss_pred CccceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHH
Q 022194 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (301)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~ 86 (301)
..+|..++.+.. .+..|...+|++.+++|..+...+...|.|+++++|.+++|++.++++.|.+..++++||++|+.++
T Consensus 4 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~ 83 (366)
T PRK08247 4 TIETKLAQIGNRSDERTGTVNPPVYFSTAYRHEGIGESTGFDYSRTGNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLV 83 (366)
T ss_pred CcchhheeCCCCCCCCCCCccCCcccCcccccCCCCCcCCccccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHH
Confidence 455666776522 2346899999999999977654334568899999999999999999999999899999999999877
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
+.++++||+|++++|.|++....+...++..|++++.++..|++.+++++++++++|++++|+||+|...++++|+++|+
T Consensus 84 ~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~ 163 (366)
T PRK08247 84 MSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAK 163 (366)
T ss_pred HHHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 78889999999999999998777767778899999999999999999999989999999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc
Q 022194 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (301)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (301)
++|+++|+|++|..+....+...++|+++.|++|+++|++++++|+++.+++.+.+.+...+...+..+++..++.+.++
T Consensus 164 ~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~ 243 (366)
T PRK08247 164 KHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRG 243 (366)
T ss_pred HcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhc
Confidence 99999999999988877777777899999999999998888889999987667777777777777777888899999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCC
Q 022194 247 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 282 (301)
Q Consensus 247 l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~ 282 (301)
++.+..+.+++.+++..+.++|+++|++..+.+|+.
T Consensus 244 l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~ 279 (366)
T PRK08247 244 MKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGR 279 (366)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCc
Confidence 999999999999999999999999999988888854
No 43
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=9.2e-38 Score=279.86 Aligned_cols=290 Identities=39% Similarity=0.609 Sum_probs=241.8
Q ss_pred cceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchH
Q 022194 10 STLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (301)
Q Consensus 10 ~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~ 80 (301)
+|..++.+.. ....|...+|++.+.+|..+... ....+.|+++++|..+++++.+++++|.+.+++++||+
T Consensus 3 ~t~~~~~~~~~~~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~sG~ 82 (418)
T TIGR01326 3 ETLQLHAGQEPDPTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVASGQ 82 (418)
T ss_pred cceeEECCCCCCCCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEccHH
Confidence 4556665522 23358899999999998765421 12346789999999999999999999999999999999
Q ss_pred HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 022194 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 81 ~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~ 159 (301)
+|+. ++..++++||+|+++++.|++....+...++..|++++.++.+|++++++++++++++|++++|+||+|.+.|++
T Consensus 83 ~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~ 162 (418)
T TIGR01326 83 AAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDIE 162 (418)
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHH
Confidence 9985 666789999999999999998877776777889999999998899999999998999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhH-------------------
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL------------------- 220 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~------------------- 220 (301)
+|+++|+++|+++|+|++|+.+....+...++|+++.|++|+++|++ .+.|+++.+++.+
T Consensus 163 ~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G-~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a 241 (418)
T TIGR01326 163 AIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHG-TAIGGVIVDGGKFDWANGRFPLFTTPDPSYHG 241 (418)
T ss_pred HHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCc-cceEEEEEecccccccccccccccCCCCcccc
Confidence 99999999999999999998877667777789999999999996654 4556555543211
Q ss_pred -------------HHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcc
Q 022194 221 -------------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 287 (301)
Q Consensus 221 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~ 287 (301)
.+.........|..+++..++.++.+++.+..|.++..+++..+.++|.++|.|..|.+|+++++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~ 321 (418)
T TIGR01326 242 LVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPH 321 (418)
T ss_pred chhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCcc
Confidence 0111122334577788999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhh-ccCCC
Q 022194 288 HELHYSQV-LSDNG 300 (301)
Q Consensus 288 ~~~~~~~~-~~~~~ 300 (301)
|++++++. +++||
T Consensus 322 ~~~~~~~~~~g~g~ 335 (418)
T TIGR01326 322 HALAKKYLPKGFGA 335 (418)
T ss_pred HHHHHHhccCCCcc
Confidence 99999998 55555
No 44
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=2.1e-37 Score=272.13 Aligned_cols=274 Identities=40% Similarity=0.657 Sum_probs=236.3
Q ss_pred CccceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHH
Q 022194 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (301)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~ 86 (301)
..+|..++.+.. .+..|...+|++.+.+|..+..-....|.|+++++|..+++++.++++.+.+.+++++||++|+.++
T Consensus 6 ~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~ 85 (364)
T PRK07269 6 HINTILAQAGIKSDEATGALVTPLHFSTTYQHPEFGQSTGFDYTRTKNPTRAKLEETLAAIESADYALATSSGMSAIVLA 85 (364)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCCcceecCCCCCcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHH
Confidence 345666766522 2336889999999999977664334568899999999999999999999999999999999999766
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
+.++++||+|+++.+.|++....+.......++++.+. .|++++++++++++++|++++|+||+|.+.++++|+++|+
T Consensus 86 l~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~ 163 (364)
T PRK07269 86 FSVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAH 163 (364)
T ss_pred HHHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHH
Confidence 67789999999999999988765544444445554443 4799999999999999999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc
Q 022194 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (301)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (301)
++|+++++|++|..+....+...|+|+++.|++|+++|++++.+|+++++++.+.++++......|..+++..++.++.+
T Consensus 164 ~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~ 243 (364)
T PRK07269 164 AKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRG 243 (364)
T ss_pred HcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcC
Confidence 99999999999988877788888999999999999998888789999988777878777666666788999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCC
Q 022194 247 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 283 (301)
Q Consensus 247 l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~ 283 (301)
++.+..+.++..+++..+.++|+++|.|..|.+|++.
T Consensus 244 L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~g 280 (364)
T PRK07269 244 LKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKG 280 (364)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcC
Confidence 9999999999999999999999999999999999874
No 45
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=3.6e-37 Score=274.95 Aligned_cols=282 Identities=32% Similarity=0.488 Sum_probs=234.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCC--------CC----CCccccCCCCchHHHHHHHHHhhcCCCceEEecc
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------EN----GPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~--------~~----~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~s 78 (301)
+..++.+-..+..+...+|++.+.+|..+... .. ..+.|++.++|..++|++.+++++|.+.+++++|
T Consensus 20 ~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~l~~~s 99 (418)
T PLN02242 20 AALASARHEFGEHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAAYCTAS 99 (418)
T ss_pred HHHhcCCCCCCCCCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeEEEEcc
Confidence 45666663334457779999999998765421 10 2367999999999999999999999999999999
Q ss_pred hHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhc-ccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeCCCCCcccc
Q 022194 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQI 155 (301)
Q Consensus 79 G~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~~np~G~~ 155 (301)
|++|+. ++.+++++||+|+++++.|+++...+.... +..|++++.++..|++++++++++ ++++|++++|+||||.+
T Consensus 100 G~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v 179 (418)
T PLN02242 100 GMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISNPTLTV 179 (418)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcc
Confidence 999985 677889999999999999988875544333 448999999998899999999987 59999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh----hc
Q 022194 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN----AE 231 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~----~~ 231 (301)
.++++|+++|+++|+++|+|++|+... ..+...++|+++.|+||++++++..++|++++++ .+.+.+..... ..
T Consensus 180 ~dl~~I~~la~~~gi~livDea~~~~~-~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~-~li~~l~~~~~~~~~~~ 257 (418)
T PLN02242 180 ADIPELARIAHEKGVTVVVDNTFAPMV-LSPARLGADVVVHSISKFISGGADIIAGAVCGPA-ELVNSMMDLHHGALMLL 257 (418)
T ss_pred cCHHHHHHHHHHhCCEEEEECCCCccC-CCHHHcCCcEEEEeCccccCCCCCceEEEEEcCH-HHHHHHHHHhhhhhhcc
Confidence 999999999999999999999997443 3556668999999999999777666689998765 45555554422 35
Q ss_pred CCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhc
Q 022194 232 GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVL 296 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~ 296 (301)
+..+.+..++.....++.+..+++++.+++.++.++|++++ ..+.+|+++++|+|.+++++.+
T Consensus 258 g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~--~~V~yP~l~~~p~~~~~~~~~~ 320 (418)
T PLN02242 258 GPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG--LKVIYPGLEDHPQHALLKSMAN 320 (418)
T ss_pred CCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC--CEEECCCCCCCccHHHHHHhcc
Confidence 56678888888889999999999999999999999999985 4799999999999999999984
No 46
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=8.5e-36 Score=262.33 Aligned_cols=283 Identities=34% Similarity=0.582 Sum_probs=243.1
Q ss_pred CccceeeecCCC-CCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecc
Q 022194 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (301)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~s 78 (301)
+++|..++.+.. .+..|...+|++.+.+|..+... ....|.|++.++|..+++++.++++.|.+.+++++|
T Consensus 8 ~~~t~~~~~~~~~~~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~~sS 87 (384)
T PRK06434 8 GFNTRAVQSGELRDPRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALSFSS 87 (384)
T ss_pred CcccceeECCCCCCCCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEEeCC
Confidence 345666765522 23468899999999998764431 123578999999999999999999999999999999
Q ss_pred hHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC-CCceEEEEeCCCCCccccc
Q 022194 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 79 G~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~ 156 (301)
|+.|+. ++.+++++||+|+++.+.|.+....+...+...|+++++++.++.+.++ ++ +++++|+++++.||++.+.
T Consensus 88 G~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~v~ 165 (384)
T PRK06434 88 GMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLKVP 165 (384)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCceee
Confidence 999986 6777899999999999999888877777888999999999987665554 44 3789999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCC
Q 022194 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
|+++|+++||+++ +++|.+++.+..+.+...|+|+++.|.+|+++|++++.+|+++++++.+.+++.......+..++
T Consensus 166 Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~ 243 (384)
T PRK06434 166 DIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPD 243 (384)
T ss_pred cHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCC
Confidence 9999999999998 46799998888888888999999999999999888778999988877777777766666788889
Q ss_pred HHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+..++..+++++.+..+.++..++++.+.++|+.+|.|..|+||+++ +++++++++||
T Consensus 244 ~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~ 301 (384)
T PRK06434 244 PIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGG 301 (384)
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCc
Confidence 99999999999999999999999999999999999999999999995 78888877666
No 47
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=259.51 Aligned_cols=265 Identities=38% Similarity=0.611 Sum_probs=230.5
Q ss_pred CCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccC
Q 022194 21 DPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLG 91 (301)
Q Consensus 21 ~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~ 91 (301)
+-.|...+|++.+.+|..+... ....+.|++.++|..+++++.+++++|.+..++++||+.|+. ++..+++
T Consensus 21 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~ 100 (389)
T PRK05968 21 NAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVE 100 (389)
T ss_pred cCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC
Confidence 3468899999999999765521 223467889889999999999999999999999999998885 6677899
Q ss_pred CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCE
Q 022194 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 171 (301)
Q Consensus 92 ~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~ 171 (301)
+||+|+++.+.|++....+...+...|++++.++..|++++++++ +++++|++++|+|+++...++++|+++|+++|++
T Consensus 101 ~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~ 179 (389)
T PRK05968 101 PGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVV 179 (389)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 999999999999988777767788899999999999999999988 5789999999999999999999999999999999
Q ss_pred EEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh-hhcCCCCCHHhHHHHHcccccH
Q 022194 172 LLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTM 250 (301)
Q Consensus 172 li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 250 (301)
+|+|++|+.+....+...|+|+++.|++|+++|++++++|+++.++ .+.+++.... ...+..+++..++..+.+++.+
T Consensus 180 vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~-~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl 258 (389)
T PRK05968 180 TMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK-EHIARINAEAYPYLGAKLSPFEAWLLLRGLRTL 258 (389)
T ss_pred EEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECH-HHHHHHHHHHHHhCCCCCChHHHHHHHcccCcH
Confidence 9999999888766777789999999999999888877889888665 4545444332 2456678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcc
Q 022194 251 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 287 (301)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~ 287 (301)
..+.++..++++++.++|+++|.|..+.+|+++++|.
T Consensus 259 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~ 295 (389)
T PRK05968 259 PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPP 295 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChH
Confidence 9999999999999999999999999999999998874
No 48
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=8.1e-29 Score=219.44 Aligned_cols=246 Identities=23% Similarity=0.277 Sum_probs=185.8
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCCC----ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKAD----RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~~----~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
.|.+. |.+. |+++.+++.+.++.+ +.+++|+| ++|+. ++.++++|||+|++++|.|..|. ......|.
T Consensus 60 ~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~----~~~~~~gg 135 (393)
T COG0436 60 HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYE----AAVKLAGG 135 (393)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHH----HHHHhcCC
Confidence 44454 8887 999999999998732 43555555 69985 88889999999999999999997 66778888
Q ss_pred EEEEecCC--------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---
Q 022194 120 VVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--- 185 (301)
Q Consensus 120 ~~~~~~~~--------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--- 185 (301)
+++.++.. |++++++++.+++++|++++||||||.+.+ +++|+++|++||+++|.||+|....+..
T Consensus 136 ~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~ 215 (393)
T COG0436 136 KPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEH 215 (393)
T ss_pred EEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCc
Confidence 88888841 689999999999999999999999999975 8899999999999999999997655432
Q ss_pred --ccC----CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc------cHHHH
Q 022194 186 --PLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK------TMALR 253 (301)
Q Consensus 186 --~~~----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~ 253 (301)
..+ ....+.++||||.+ +.+|+|.||++++++.+.+.+.........+.+...+.++..+++ .+...
T Consensus 216 ~s~~~~~~~~~~~i~i~s~SK~~-~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~ 294 (393)
T COG0436 216 PSILELAGARDRTITINSFSKTY-GMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEM 294 (393)
T ss_pred CCHhhcCCCcceEEEEecccccc-cccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHH
Confidence 111 24579999999999 678999999999877777777656665555555555555444433 23455
Q ss_pred HHHHHHHHHHHHHHHHhCCCcceEecC--------CCCC-CcchHHHHhhhccC
Q 022194 254 VEKQQDNAQKIAEFLASHPRVKKVNYA--------GLPE-HPGHELHYSQVLSD 298 (301)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~v~~v~~p--------~~~~-~~~~~~~~~~~~~~ 298 (301)
++.+.++++.+.+.|.+.+++..+..| .++. ..+..|++......
T Consensus 295 ~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~ 348 (393)
T COG0436 295 REEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEA 348 (393)
T ss_pred HHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhC
Confidence 577889999999999987655433323 2222 34566766665544
No 49
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.96 E-value=3.5e-27 Score=200.17 Aligned_cols=221 Identities=22% Similarity=0.226 Sum_probs=169.9
Q ss_pred CCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhccc
Q 022194 45 GPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (301)
Q Consensus 45 ~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~ 116 (301)
...+|++. |.|. ++.|++.+++++|. ++.+++|.|. +++. +++.++++||+|++.+|.|..|. .....
T Consensus 61 ~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~----~~~~m 136 (420)
T KOG0257|consen 61 STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYI----PQVVM 136 (420)
T ss_pred hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhh----hHHhh
Confidence 34567776 8887 99999999997754 4667777775 8885 99999999999999999999997 44455
Q ss_pred CCcEEEEecCC-------------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCC
Q 022194 117 TGVVVKRVNTC-------------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (301)
Q Consensus 117 ~g~~~~~~~~~-------------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~ 180 (301)
.|...+.++.. |.++++.++.+++++|++++||||||.+.+ |++|+++|++||+++|.||+|-.
T Consensus 137 aG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~ 216 (420)
T KOG0257|consen 137 AGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEW 216 (420)
T ss_pred cCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHH
Confidence 56666655542 899999999999999999999999999974 89999999999999999999853
Q ss_pred ccc---------cCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHH---H-Hccc
Q 022194 181 PVL---------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI---C-LRGV 247 (301)
Q Consensus 181 ~~~---------~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~l 247 (301)
.++ ..|..++..+.++|++|+| |..|.|.||+++ ++.+....+..........+...+.+ + ...+
T Consensus 217 ~v~d~~~h~r~aslPgm~ertitvgS~gKtf-~~TGWrlGW~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~ 294 (420)
T KOG0257|consen 217 LVYDGNKHIRIASLPGMYERTITVGSFGKTF-GVTGWRLGWAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALEL 294 (420)
T ss_pred HhhCCCcceeeecCCchhheEEEecccccee-eeeeeeeeeeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhh
Confidence 322 2355667899999999999 678999999999 56777766666654443332222111 1 1111
Q ss_pred --------ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 248 --------KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 248 --------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
....++.+.+.++++.+.+.|.+.
T Consensus 295 ~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 295 ACLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 123457788999999999999886
No 50
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.4e-26 Score=205.12 Aligned_cols=222 Identities=21% Similarity=0.208 Sum_probs=164.7
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC----ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD----RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~----~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|++. |.+. ++++.+++++.+|.+ +.+++++| ++++. ++..++++||+|++++|.|+.+. ..++..|
T Consensus 72 ~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~----~~~~~~g 147 (405)
T PRK06207 72 QAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANR----KLVEFFE 147 (405)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHHcC
Confidence 457655 6766 889999999887742 45666666 58885 66678899999999999999886 5666778
Q ss_pred cEEEEecCC----------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC
Q 022194 119 VVVKRVNTC----------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR 185 (301)
Q Consensus 119 ~~~~~~~~~----------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~ 185 (301)
.+++.++.+ |++++++++++++++|++++|+||||.+.+ +++|+++|+++|++||+||+|....+..
T Consensus 148 ~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~ 227 (405)
T PRK06207 148 GEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDG 227 (405)
T ss_pred CEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC
Confidence 888777642 788999999888999999999999999986 7789999999999999999998643311
Q ss_pred -----c----cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc----cHHH
Q 022194 186 -----P----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMAL 252 (301)
Q Consensus 186 -----~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~ 252 (301)
. ......+++.||||.+ +.+|+|.||+++++ .+.+.+...........+...+.++...++ .+.+
T Consensus 228 ~~~~~~~~~~~~~~~vi~i~SfSK~~-~lpGlRiG~ii~~~-~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 305 (405)
T PRK06207 228 TSYTHLRALPIDPENVITIMGPSKTE-SLSGYRLGVAFGSP-AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKD 305 (405)
T ss_pred CCCCchhcCCCCcCcEEEEecchhhc-cCcccceEEEEcCH-HHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHH
Confidence 1 1234569999999999 55689999999764 566666555544444444444444433332 3566
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc
Q 022194 253 RVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~v 274 (301)
.++++.++++.+.+.|++++++
T Consensus 306 ~~~~~~~~r~~l~~~L~~~~~~ 327 (405)
T PRK06207 306 RIARHQAIRDDLLRVLRGVEGV 327 (405)
T ss_pred HHHHHHHHHHHHHHHHhcCCCc
Confidence 6677777778888888776544
No 51
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=2.7e-26 Score=206.22 Aligned_cols=255 Identities=17% Similarity=0.117 Sum_probs=184.7
Q ss_pred CCccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC--CCchHHHHHHHHHhhcCCCceEEecchHHHHH
Q 022194 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDKADRALCFTSGMAALA 84 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~ 84 (301)
+++...+++|+ +|||+|+..+|.+.......-+.........+.+ +.+...++++.+++++|.++++++++|++|+.
T Consensus 50 ~~~g~~~~~~~-~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~ 128 (407)
T PRK07179 50 KTPGPDAIILQ-SNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANV 128 (407)
T ss_pred cCCCCcEEEee-cCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHH
Confidence 45556789999 8999999999998876533321111111111122 44568999999999999998999999999885
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHH
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
++..+..+||.|++..+.|.+... .+...|+++..++..|++++++++++ ++++|++++++||+|.+.|+++|.
T Consensus 129 ~~l~~l~~~g~~v~~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~ 204 (407)
T PRK07179 129 GLLQTIADPNTPVYIDFFAHMSLWE----GVRAAGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV 204 (407)
T ss_pred HHHHHhCCCCCEEEEECCcCHHHHH----HHHHCCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence 667788899999998888877753 33456778888877899999999875 578999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCccccC-------c--cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh--hc
Q 022194 163 EMAHAHGALLLVDNSIMSPVLSR-------P--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AE 231 (301)
Q Consensus 163 ~l~~~~~~~li~D~~~~~~~~~~-------~--~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~--~~ 231 (301)
++|+++|+++|+||+|+.+..+. . ...++|+++.|+||++++ ++|++++++ .+.+.+..... ..
T Consensus 205 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~----~~G~l~~~~-~~~~~~~~~~~~~~~ 279 (407)
T PRK07179 205 DIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG----RAGIITCPR-ELAEYVPFVSYPAIF 279 (407)
T ss_pred HHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc----cCeEEEeCH-HHHHHHHHhCcCeee
Confidence 99999999999999998654321 1 112458999999999953 368888774 45444433221 23
Q ss_pred CCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 232 GSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+..+...+++...++ ...++++++.++.+++.+.|+++
T Consensus 280 ~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~ 322 (407)
T PRK07179 280 SSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL 322 (407)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 34444444433333333 33456788888899999999875
No 52
>PLN02187 rooty/superroot1
Probab=99.95 E-value=9.9e-26 Score=204.61 Aligned_cols=224 Identities=16% Similarity=0.176 Sum_probs=159.1
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCC--C-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKA--D-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~--~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
.+.|.+. |.+. ++++.+++.+.++. + +.+++++| ++++. ++..+++|||+|++++|.|+.+. ..+...|
T Consensus 101 ~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~----~~~~~~g 176 (462)
T PLN02187 101 GNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYD----ARAAYSG 176 (462)
T ss_pred CCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHH----HHHHHcC
Confidence 3456554 6554 66677777655432 2 44555555 68986 56667899999999999999985 5566788
Q ss_pred cEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---
Q 022194 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--- 185 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--- 185 (301)
.+++.++.. |+++++++++++++++++++|+||||.+.+ +++|+++|+++|++||+||+|....+..
T Consensus 177 ~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~ 256 (462)
T PLN02187 177 LEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPF 256 (462)
T ss_pred CEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 888887651 789999999888999999999999999986 8889999999999999999998644321
Q ss_pred -c----cCCCCcEEEecccccccCCCCceeeEEEEcc-hhH---HHHHHHhhhhcCC--CCCHHhHHHHHccc-----cc
Q 022194 186 -P----LELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERL---AKELYFLQNAEGS--GLAPFDCWICLRGV-----KT 249 (301)
Q Consensus 186 -~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~-~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~l-----~~ 249 (301)
+ ......++++||||.| +.+|+|.||+++.+ +.+ .+.+......... ..+...+.++...+ +.
T Consensus 257 ~s~~~~~~~~~vi~l~SfSK~f-~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~ 335 (462)
T PLN02187 257 VSMGKFASIVPVLTLAGISKGW-VVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNF 335 (462)
T ss_pred eeHHHhccCCcEEEEecchhhc-CCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHH
Confidence 1 1112479999999999 56799999999853 322 2333333333322 22344444443333 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 250 MALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
+.+.++.+.++++.+.+.|++++.+
T Consensus 336 l~~~~~~l~~~r~~l~~~L~~~~~~ 360 (462)
T PLN02187 336 FAKKNKILKHNVDLVCDRLKDIPCV 360 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 5666778888888899999887543
No 53
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7.3e-26 Score=202.89 Aligned_cols=251 Identities=13% Similarity=0.160 Sum_probs=174.1
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCch-HHHHHHHHHhhcCC----CceEEecch-HHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPT-RDALESLLAKLDKA----DRALCFTSG-MAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~-~~~l~~~l~~~~~~----~~~i~~~sG-~~ai~ 84 (301)
..+++|+.+..+++. ++.+.... .. .......+.|...|.+. ++++.+++.+.+|. ++.+++++| ++++.
T Consensus 32 ~~~i~l~~g~p~~~~--~~~~~~~~-~~-~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 107 (399)
T PRK07681 32 HKMIDLSIGNPDMPP--ADFVREEM-VH-TANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLV 107 (399)
T ss_pred CCeEEeCCCCCCCCC--CHHHHHHH-HH-HHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHH
Confidence 367888844434432 23222221 11 01111335555446655 77788888766543 245666666 58886
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
++..++++||+|++++|.|+.+. ..++..|++++.++.+ |++++++++.+++++|++++|+||||.+.
T Consensus 108 ~~~~~~~~~Gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~ 183 (399)
T PRK07681 108 HLPMVYANPGDIILVPDPGYTAYE----TGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMA 183 (399)
T ss_pred HHHHHhCCCCCEEEECCCCccchH----HHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCC
Confidence 56678899999999999999986 5566788999888753 67888888878899999999999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCccccC----c----c-CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P----L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~----~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
+ +++|+++|+++|+++|+||+|....+.. . . ....++++.||||.+ |.+|+|.||++++ +.+.+.+
T Consensus 184 s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~~i~~-~~l~~~~ 261 (399)
T PRK07681 184 HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSY-SLAGSRIGYMIGN-EEIVRAL 261 (399)
T ss_pred CHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccccc-CCccceeEEEecC-HHHHHHH
Confidence 7 7889999999999999999997543321 1 1 124579999999999 6678999999976 4566666
Q ss_pred HHhhhhcCCCCCHHhHHHHHccc----ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 225 YFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.........+.+...+.++...+ +.+.+.++.+.++.+.+.+.|+++
T Consensus 262 ~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (399)
T PRK07681 262 TQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF 312 (399)
T ss_pred HHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 55554444445554444444433 234555667777788888888875
No 54
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2e-25 Score=199.38 Aligned_cols=221 Identities=18% Similarity=0.220 Sum_probs=167.0
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|... |.+. ++++++++++.+|. ++.+++++| ++++. ++..++++||+|++++|.|..+. ..++..|
T Consensus 59 ~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g 134 (389)
T PRK05957 59 HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHE----MAITMAG 134 (389)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHH----HHHHhcC
Confidence 356555 6666 89999999988875 345666666 58885 56667899999999999998886 3446778
Q ss_pred cEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----
Q 022194 119 VVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----- 185 (301)
Q Consensus 119 ~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----- 185 (301)
++++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+..
T Consensus 135 ~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~ 214 (389)
T PRK05957 135 CQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFS 214 (389)
T ss_pred CEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccC
Confidence 898888764 789999999888999999999999999987 8889999999999999999987443321
Q ss_pred ----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHHH
Q 022194 186 ----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQ 257 (301)
Q Consensus 186 ----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~ 257 (301)
+......+++.|+||.+ |.+|+|.|++++++ .+.+.+...........+...+.++...++ .+++..+++
T Consensus 215 ~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 292 (389)
T PRK05957 215 PGSIPGSGNHTISLYSLSKAY-GFASWRIGYMVIPI-HLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEI 292 (389)
T ss_pred hhhCCCccCcEEEEecchhhc-cCccceeEEEecCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHH
Confidence 12234579999999999 67889999999875 566666655554444444444444444332 356666778
Q ss_pred HHHHHHHHHHHHhCCC
Q 022194 258 QDNAQKIAEFLASHPR 273 (301)
Q Consensus 258 ~~~~~~l~~~l~~~~~ 273 (301)
.++++.+.+.|+++++
T Consensus 293 ~~~r~~l~~~L~~~~~ 308 (389)
T PRK05957 293 AQVRQILLKSLGQLQD 308 (389)
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8888889999987654
No 55
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=9.9e-26 Score=202.02 Aligned_cols=252 Identities=15% Similarity=0.145 Sum_probs=174.2
Q ss_pred cceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCch-HHHHHHHHHhhcCCC-----ceEEecchH-HH
Q 022194 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPT-RDALESLLAKLDKAD-----RALCFTSGM-AA 82 (301)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~-~~~l~~~l~~~~~~~-----~~i~~~sG~-~a 82 (301)
...+++|+.+.++++. +|.+.... .. .........|...|.+. ++++.+++.+.+|.+ +.|++++|+ ++
T Consensus 43 ~~~~i~L~~g~p~~~~--~~~~~~~l-~~-~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 43 DMELIDMGVGEPDEMA--DESVVEVL-CE-EAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCeEEcCCCCCCCCC--CHHHHHHH-HH-HHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 3457888855555552 33333221 11 01111223455446655 777888877765532 357777875 88
Q ss_pred HH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCccc
Q 022194 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQ 154 (301)
Q Consensus 83 i~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~ 154 (301)
+. ++..++++||.|++++|.|+.+. ..++..|.++..++.+ |++.+++.+.+++++|++++|+||||.
T Consensus 119 l~~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~ 194 (410)
T PRK06290 119 LAMLPSCFINPGDVTLMTVPGYPVTG----THTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGA 194 (410)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCccHH----HHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCc
Confidence 85 56677899999999999999986 5566788888888764 678888888888999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---c-----cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 155 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---P-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 155 ~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---~-----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
+.+ +++|+++|++||++||+||+|....+.. . ...+.++++.||||.+ |.+|+|.||+++++ .+.+.
T Consensus 195 v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~-g~~GlRiG~ii~~~-~l~~~ 272 (410)
T PRK06290 195 VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAY-NMTGWRLAFVVGNE-LIVKA 272 (410)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhc-CCchhheEeEEeCH-HHHHH
Confidence 987 6788899999999999999997543321 1 1124579999999999 56789999999864 55565
Q ss_pred HHHhhhhcCCCCCHHhHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 224 LYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.........+.+...+.++...+ +.+.+.++++.++++.+.+.|+++
T Consensus 273 l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (410)
T PRK06290 273 FATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV 323 (410)
T ss_pred HHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 554444333333333333433333 234556677788888888888875
No 56
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=3.9e-26 Score=201.32 Aligned_cols=248 Identities=21% Similarity=0.230 Sum_probs=179.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCcccc---CC-C-CchHHHHHHHHHhhcCCCceEEecchHHHHH-
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYT---RS-G-NPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~---~~-g-~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~- 84 (301)
+.+++|+ +|+|+|...+|.+....-..-+ ...+.++ .. | .+.++++++.++++++.++.+++++|++++.
T Consensus 1 ~~~~~~~-~~~~~~~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~ 76 (349)
T cd06454 1 KKVLNFC-SNDYLGLANHPEVIEAAKEALD---KYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDG 76 (349)
T ss_pred CCceecc-cCCccccCCCHHHHHHHHHHHH---HhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHH
Confidence 3689999 9999999988887765432211 1111111 11 3 3558999999999999988899999998874
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-----CceEEEEeCCCCCccccccHH
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-----WTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-----~~~~v~i~~~~np~G~~~~l~ 159 (301)
++..++++||+|++++|.|.++.. .+...|.++++++..|.+++++.+++ +++++++++++||+|...|++
T Consensus 77 ~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~ 152 (349)
T cd06454 77 VLSTLAGKGDLIISDSLNHASIID----GIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLP 152 (349)
T ss_pred HHHHhcCCCCEEEEehhhhHHHHH----HHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHH
Confidence 566778999999999999988763 34557888888877788888888763 578888899999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCcccc---------CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 230 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~---------~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~ 230 (301)
+|+++|+++|+++|+|++|+.+... .....+.|++++|+||+++. + +|+++.++ .+.+.+......
T Consensus 153 ~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~---gG~i~~~~-~~~~~~~~~~~~ 227 (349)
T cd06454 153 ELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-V---GGYIAGSK-ELIDYLRSYARG 227 (349)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-c---CCEEECCH-HHHHHHHHhchh
Confidence 9999999999999999999765432 11345789999999999954 3 47777664 444444333221
Q ss_pred --cCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 231 --EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 231 --~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+...++....++..+++.+ ...+++..++.+.+.+.|+++
T Consensus 228 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 228 FIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred hhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 22344555454544444432 456677788888888888765
No 57
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.94 E-value=5e-26 Score=203.80 Aligned_cols=251 Identities=15% Similarity=0.144 Sum_probs=178.3
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC--CC-chHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
..+++|+ +++|+|...+|.+.......-.. ....+.-++. |. +...++++.+++++|.+++++++||++|+. ++
T Consensus 38 ~~~i~~~-~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~ 115 (393)
T TIGR01822 38 REVLNFC-ANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLF 115 (393)
T ss_pred ceEEEee-CCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHH
Confidence 4789999 89999999888877654322110 0112222232 53 447999999999999999999999998885 55
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC------CceEEEEeCCCCCccccccHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~ 160 (301)
..++++||+|+++++.|+++...+ +..+.....+...|++++++.+++ ++++|++++++|++|.+.|+++
T Consensus 116 ~~l~~~gd~vi~~~~~~~s~~~~~----~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~ 191 (393)
T TIGR01822 116 ETLLGAEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDE 191 (393)
T ss_pred HHhCCCCCEEEEeccccHHHHHHH----HhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHH
Confidence 667899999999999999887544 223333344455688888888763 6889999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCccccC---------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh--
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-- 229 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~-- 229 (301)
|+++|++||+++|+||+|+.+.... ....+.|++++|+||+++|+ ++|++++++ .+.+.+.....
T Consensus 192 i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~---r~G~~~~~~-~~~~~l~~~~~~~ 267 (393)
T TIGR01822 192 ICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGA---SGGFTTARK-EVVELLRQRSRPY 267 (393)
T ss_pred HHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCC---CcEEEEeCH-HHHHHHHHhCccc
Confidence 9999999999999999997655421 11225789999999999653 579988764 45554443221
Q ss_pred hcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 230 AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
....+.++....++..+++. .++.++++.++.+++.+.|++.
T Consensus 268 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 268 LFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred eecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 22233444443344444433 3456677888888898888764
No 58
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.94 E-value=4.8e-26 Score=198.10 Aligned_cols=249 Identities=23% Similarity=0.214 Sum_probs=192.6
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC--CC-chHHHHHHHHHhhcCCCceEEecchHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GN-PTRDALESLLAKLDKADRALCFTSGMAAL-AAV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~ 86 (301)
..++||+ +|||+|++.+|.+.......-+ ....+..-++. |+ +...+||+.|++++|.+.+++++||..|. .++
T Consensus 39 ~~~~nf~-SNdYLGLa~~~~~~~a~~~~~~-~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i 116 (388)
T COG0156 39 RKVLNFC-SNDYLGLASHPELIEAAKAAIR-RYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLL 116 (388)
T ss_pred ceeEeee-ccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHH
Confidence 4689999 9999999999998766433211 11122223443 66 44999999999999999999999998665 688
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC------CceEEEEeCCCCCccccccHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~ 160 (301)
.++++++|.|+.....|-+.. ..++..+.+++.....|+++||+.+++ +.++|++++...+.|.+.|+++
T Consensus 117 ~~l~~~~dli~~D~lnHASii----dG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~ 192 (388)
T COG0156 117 SALLKKGDLIFSDELNHASII----DGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPE 192 (388)
T ss_pred HHhcCCCcEEEEechhhhhHH----HHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHH
Confidence 889999998888777777665 555677788888888999999999975 3578888999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCccccCc----------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh--
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLSRP----------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-- 228 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~~~----------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~-- 228 (301)
|++++++|++++++||+|+.|+++.. .....|++++||+|+|++ .+|++.++ +.+.+.+....
T Consensus 193 l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs----~Gg~v~g~-~~~~d~L~~~ar~ 267 (388)
T COG0156 193 LVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS----SGGYIAGS-AALIDYLRNRARP 267 (388)
T ss_pred HHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc----cCceeeCc-HHHHHHHHHhCCc
Confidence 99999999999999999999887631 112358999999999964 35777765 56666554432
Q ss_pred hhcCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHh
Q 022194 229 NAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~ 270 (301)
..+...++|..++++...++.+ .+++++++++..++++.++.
T Consensus 268 ~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~ 312 (388)
T COG0156 268 FIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKA 312 (388)
T ss_pred eeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 2345678888877777766654 57888999999999866655
No 59
>PRK07324 transaminase; Validated
Probab=99.94 E-value=2.4e-25 Score=197.63 Aligned_cols=221 Identities=20% Similarity=0.244 Sum_probs=159.0
Q ss_pred CccccCC-CCchHHHHHHHHHhhcC---CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 46 PYDYTRS-GNPTRDALESLLAKLDK---ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 46 ~~~y~~~-g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
...|++. |.+ ++++.++++++ .+++++++++++++. ++..++++||+|+++.|.|..+. ..++..|.+
T Consensus 55 ~~~Y~~~~G~~---~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~ 127 (373)
T PRK07324 55 KLTYGWIEGSP---EFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY----DIPESLGAE 127 (373)
T ss_pred CccCCCCCCCH---HHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCE
Confidence 3456654 554 45555555542 234544555568885 66778999999999999998886 556678888
Q ss_pred EEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----c
Q 022194 121 VKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P 186 (301)
Q Consensus 121 ~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~ 186 (301)
++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+.. .
T Consensus 128 v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~ 207 (373)
T PRK07324 128 VDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSI 207 (373)
T ss_pred EEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCCh
Confidence 8888753 678999888889999999999999999987 8889999999999999999987543321 1
Q ss_pred c-CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHH
Q 022194 187 L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNA 261 (301)
Q Consensus 187 ~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~ 261 (301)
. ..+..+++.|+||.+ |.+|+|.||++++ +.+.+.+...........+...+.++...++. +.+.++.+.++.
T Consensus 208 ~~~~~~~I~~~s~SK~~-~~~G~RiG~i~~~-~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~ 285 (373)
T PRK07324 208 ADLYEKGISTNSMSKTY-SLPGIRVGWIAAN-EEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNL 285 (373)
T ss_pred hhccCCEEEEecchhhc-CCccceeEEEecC-HHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 1 123568999999999 5678999999985 56767666665544444444444444444433 344455667777
Q ss_pred HHHHHHHHhCCCcc
Q 022194 262 QKIAEFLASHPRVK 275 (301)
Q Consensus 262 ~~l~~~l~~~~~v~ 275 (301)
+.+.+.|++++.+.
T Consensus 286 ~~l~~~l~~~~~~~ 299 (373)
T PRK07324 286 AILDEWVAKEPRVS 299 (373)
T ss_pred HHHHHHHhcCCCce
Confidence 78888888776553
No 60
>PLN00175 aminotransferase family protein; Provisional
Probab=99.94 E-value=2.4e-25 Score=199.95 Aligned_cols=220 Identities=18% Similarity=0.221 Sum_probs=165.8
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCCC----ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccC
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKAD----RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~~----~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
...|++. |.+. ++++.+++.+.++.+ +.+++++| ++++. ++..++++||+|++++|.|..+. ..++..
T Consensus 84 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~ 159 (413)
T PLN00175 84 KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE----ATLSMA 159 (413)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHc
Confidence 3457666 7766 788888888776642 24665665 68885 66778999999999999999886 555678
Q ss_pred CcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---
Q 022194 118 GVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--- 185 (301)
Q Consensus 118 g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--- 185 (301)
|.+++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|+++|++|++++|+||+|....+..
T Consensus 160 g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~ 239 (413)
T PLN00175 160 GAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHI 239 (413)
T ss_pred CCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCccc
Confidence 8888888753 678999999888999999999999999975 7889999999999999999997544321
Q ss_pred -----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHH
Q 022194 186 -----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEK 256 (301)
Q Consensus 186 -----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~ 256 (301)
....+..++++||||.| +.+|+|.||+++++ .+.+.+.........+.+...+.++...++ .+.+.++.
T Consensus 240 s~~~~~~~~~~vi~i~SfSK~~-~~~G~RiG~~v~~~-~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~ 317 (413)
T PLN00175 240 SMASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAPP-HLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRD 317 (413)
T ss_pred ChhhCCCCcCcEEEEecchhhc-cCcchheeeeEeCH-HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 11135679999999999 55789999999875 455655555544444555555555544442 35666778
Q ss_pred HHHHHHHHHHHHHhC
Q 022194 257 QQDNAQKIAEFLASH 271 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (301)
+.++++.+.+.|+++
T Consensus 318 ~~~~~~~l~~~L~~~ 332 (413)
T PLN00175 318 YSAKKDILVEGLKEV 332 (413)
T ss_pred HHHHHHHHHHHHHHC
Confidence 888888899999875
No 61
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=3.1e-25 Score=197.93 Aligned_cols=219 Identities=16% Similarity=0.152 Sum_probs=160.6
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|++. |.+. ++++.+++++.++. ++.+++++| ++++. ++..++++||+|++++|+|+.+. ..++..|
T Consensus 61 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~G 136 (383)
T TIGR03540 61 HRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYR----IGTLFAG 136 (383)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchH----HHHHhcC
Confidence 456665 6655 88888888876654 235666666 58886 55667899999999999999986 4556788
Q ss_pred cEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---
Q 022194 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--- 185 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--- 185 (301)
.+++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|+++|++||+++|+||+|....+..
T Consensus 137 ~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~ 216 (383)
T TIGR03540 137 GEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKA 216 (383)
T ss_pred CEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCC
Confidence 888887753 678888888888999999999999999987 7889999999999999999997433211
Q ss_pred ----c-c-CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc----ccHHHHHH
Q 022194 186 ----P-L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVE 255 (301)
Q Consensus 186 ----~-~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~ 255 (301)
. . ....++++.||||+| |.+|+|.||+++++ .+.+.+.........+.+...+.++...+ +++++.++
T Consensus 217 ~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~i~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 294 (383)
T TIGR03540 217 PSFLEVDGAKDVGIEFHSLSKTY-NMTGWRIGMAVGNA-DLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRK 294 (383)
T ss_pred cCcccCCCcccCEEEEEeccccc-CCccceeeEEeCCH-HHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHH
Confidence 0 1 123568999999999 67889999998864 55565555444333333443433433333 33456667
Q ss_pred HHHHHHHHHHHHHHhC
Q 022194 256 KQQDNAQKIAEFLASH 271 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~ 271 (301)
.+.++++.+.+.|+++
T Consensus 295 ~~~~~~~~~~~~L~~~ 310 (383)
T TIGR03540 295 IYQRRRDLLLEALKKI 310 (383)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 7788888899999875
No 62
>PLN02368 alanine transaminase
Probab=99.94 E-value=5e-25 Score=196.47 Aligned_cols=224 Identities=15% Similarity=0.181 Sum_probs=161.5
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecch-HHHHH-HHHhcc-CCCCeEEEcCCCCccHHHHHhhhcccC
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~-~~~~~~-~~g~~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
...|++. |.+. ++++.+++.+.+|.+ +.+++++| ++++. ++..++ ++||+|++++|.|+.+. ..+...
T Consensus 100 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~----~~~~~~ 175 (407)
T PLN02368 100 LGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS----ATISLL 175 (407)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH----HHHHHc
Confidence 3457665 7655 888888888776632 45666666 58886 555566 69999999999999997 555677
Q ss_pred CcEEEEecCC-------CHHHHHhhcCC------CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 118 GVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 118 g~~~~~~~~~-------d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
|.+++.++.+ |++.+++.+++ +++++++++|+||||.+.+ +++|+++|++||++||+||+|...
T Consensus 176 g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l 255 (407)
T PLN02368 176 GGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQN 255 (407)
T ss_pred CCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 8888887653 67889888863 6899999999999999975 777899999999999999999765
Q ss_pred cccC--cc---------------CCCCcEEEecccccccCCCCceeeEEEE--cchhHHHHHHHhhhhcCCCCCHHhHHH
Q 022194 182 VLSR--PL---------------ELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCWI 242 (301)
Q Consensus 182 ~~~~--~~---------------~~~~di~~~S~sK~~~g~~g~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
.+.. +. ..+..+++.||||.|.+.+|+|.||+++ .++.+.+.+...... ....+...+.+
T Consensus 256 ~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~a 334 (407)
T PLN02368 256 IYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIF 334 (407)
T ss_pred ccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHH
Confidence 4321 00 1236799999999986678899999985 345566655554322 23344444444
Q ss_pred HHcccc-------c----H---HHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 243 CLRGVK-------T----M---ALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 243 ~~~~l~-------~----~---~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
+...++ . . .+.++.+.+++..+.+.|++++++
T Consensus 335 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~ 380 (407)
T PLN02368 335 MGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNV 380 (407)
T ss_pred HHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 443332 1 1 234567788888899999988765
No 63
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=1e-25 Score=200.66 Aligned_cols=246 Identities=14% Similarity=0.170 Sum_probs=174.9
Q ss_pred eecCCCCCCCCccccCeeecceeecCCCCCCCCccccC--CCC-chHHHHHHHHHhhcCCCceEEecchHHHH-HHHHhc
Q 022194 14 MNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR--SGN-PTRDALESLLAKLDKADRALCFTSGMAAL-AAVTHL 89 (301)
Q Consensus 14 ~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~~~ 89 (301)
++|+ +|||||+..+|.+.......-+. ...+..-++ +|. ....+|++.++++++.++++++++|+.+. .++..+
T Consensus 1 ~~f~-s~dyLgl~~~~~~~~~~~~a~~~-~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l 78 (392)
T PLN03227 1 LNFA-THDFLSTSSSPTLRQTALESLSH-YGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAF 78 (392)
T ss_pred CCCc-CcCccCCCCCHHHHHHHHHHHHH-hCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHh
Confidence 5888 99999999999887654322110 000111111 233 35899999999999999999999998555 677889
Q ss_pred cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHh---hcC-----------CCceEEEEeCCCCCcccc
Q 022194 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVAS---AIG-----------PWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 90 ~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~---~l~-----------~~~~~v~i~~~~np~G~~ 155 (301)
+++||+|+++++.|.++...+ ...+.++.+++..|.+++++ .+. +++++|+++++.|++|.+
T Consensus 79 ~~~GD~Vl~~~~~h~s~~~~~----~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i 154 (392)
T PLN03227 79 AKRGDLLVVDRGVNEALLVGV----SLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTL 154 (392)
T ss_pred CCCCCEEEEeccccHHHHHHH----HHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcc
Confidence 999999999999998886433 23345777777666655544 332 257899999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCcCCccccC-----------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-----------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
.|+++|.++|++||+++|+||+|+.+..+. ....++|+++.|++|++ |+ ++|++++++ .+.+.+
T Consensus 155 ~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~---~gg~v~~~~-~~~~~~ 229 (392)
T PLN03227 155 APLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GS---VGGMTVGSE-EVVDHQ 229 (392)
T ss_pred cCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hc---cCcEEecCH-HHHHHH
Confidence 999999999999999999999998654432 11346799999999998 44 467777664 444443
Q ss_pred HHhh--hhcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHh
Q 022194 225 YFLQ--NAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 225 ~~~~--~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~ 270 (301)
.... ..++..+++..++++..++.. ..++++++.++.+++++.|++
T Consensus 230 ~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 230 RLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred HHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 3222 223344456555555544433 246778889999999999974
No 64
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.94 E-value=3.2e-25 Score=198.14 Aligned_cols=251 Identities=15% Similarity=0.100 Sum_probs=168.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC--C-c-eEEecchH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA--D-R-ALCFTSGM-AAL 83 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~--~-~-~i~~~sG~-~ai 83 (301)
..+++|+.+...++. +|.+.... .. .........|.+. |.+. ++++.+++.+.+|. + + .+++++|+ +++
T Consensus 30 ~~~i~l~~~~~~~~~--~~~~~~~~-~~-~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al 105 (388)
T PRK07366 30 KELIDLSLGSSDLPA--PAHALEAI-AQ-SLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGT 105 (388)
T ss_pred CCeEEeCCCCCCCCC--CHHHHHHH-HH-HHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHH
Confidence 357888744444443 23332221 11 1111123456654 6655 77788887766553 2 3 57777775 888
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccc
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~ 155 (301)
. ++..++++||+|++++|+|..+. ..++..|.+++.++.+ |++++++.+..+++++++++||||||.+
T Consensus 106 ~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~ 181 (388)
T PRK07366 106 AHLPLAVLNPGDFALLLDPGYPSHA----GGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAI 181 (388)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcchH----HHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCcc
Confidence 6 55667899999999999999996 5667788898888764 4667777777789999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCcCCccccC------cc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHH
Q 022194 156 CD---IRKIAEMAHAHGALLLVDNSIMSPVLSR------PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (301)
Q Consensus 156 ~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~------~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~ 222 (301)
.+ +++|+++|+++|++||+||+|....+.. .. .....++++||||++ |.+|+|.||+++++ .+.+
T Consensus 182 ~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-g~~GlRiG~~v~~~-~li~ 259 (388)
T PRK07366 182 APLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSY-NMGGFRIGFAIGNA-QLIQ 259 (388)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeeccccc-CCcchhheehcCCH-HHHH
Confidence 76 6778889999999999999987543321 11 112458899999999 66789999999764 5666
Q ss_pred HHHHhhhhcCCCC-CHHhHHH--HHc-ccccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 223 ELYFLQNAEGSGL-APFDCWI--CLR-GVKTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 223 ~~~~~~~~~~~~~-~~~~~~~--~~~-~l~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.........+. +.....+ .+. .-+.+.+.++.+.++.+.+.+.|+++
T Consensus 260 ~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~ 312 (388)
T PRK07366 260 ALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI 312 (388)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6655554433332 2221111 121 12345666777888888888888765
No 65
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.94 E-value=7e-25 Score=195.78 Aligned_cols=219 Identities=16% Similarity=0.144 Sum_probs=158.9
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|++. |.+. ++++.+++.+.+|. ++.+++++| ++++. ++..++++||+|++++|.|+.+. ..++..|
T Consensus 63 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~----~~~~~~g 138 (385)
T PRK09276 63 HQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYK----IGTIFAG 138 (385)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChH----HHHHHcC
Confidence 356655 6555 78888888776653 234666666 58886 55667899999999999999886 4556778
Q ss_pred cEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---
Q 022194 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--- 185 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--- 185 (301)
.+++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+..
T Consensus 139 ~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (385)
T PRK09276 139 GEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKP 218 (385)
T ss_pred CEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCC
Confidence 888877753 577888888888999999999999999987 6889999999999999999997543211
Q ss_pred -c-c----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc----ccHHHHHH
Q 022194 186 -P-L----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVE 255 (301)
Q Consensus 186 -~-~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~ 255 (301)
. . ..+.++++.||||.| |.+|+|.||+++++ .+.+.+.........+.+...+.++...+ +.+++.++
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~i~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 296 (385)
T PRK09276 219 PSFLEVPGAKDVGIEFHSLSKTY-NMTGWRIGFAVGNA-DLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRK 296 (385)
T ss_pred CChhccCCCcCCEEEEecchhhc-CCcchhheeeeCCH-HHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHH
Confidence 1 1 124578999999999 67899999999864 45565555444333334444433333333 23455566
Q ss_pred HHHHHHHHHHHHHHhC
Q 022194 256 KQQDNAQKIAEFLASH 271 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~ 271 (301)
.+.++++.+.+.|++.
T Consensus 297 ~~~~~~~~l~~~L~~~ 312 (385)
T PRK09276 297 IYQERRDILVEGLRKL 312 (385)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 7777788888888875
No 66
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=1.2e-24 Score=194.13 Aligned_cols=249 Identities=18% Similarity=0.220 Sum_probs=173.1
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCCC-----ceEEecchHHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKAD-----RALCFTSGMAALA 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~-----~~i~~~sG~~ai~ 84 (301)
.+++|+.+.+.++ .++.+.... .. ........|.+. |.+. ++++++++++++|.+ +++++++|++++.
T Consensus 30 ~~i~l~~g~p~~~--~~~~~~~~~-~~--~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~ 104 (384)
T PRK12414 30 DALNLSQGAPNFA--PDPALVEGV-AR--AMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLY 104 (384)
T ss_pred CeEEcCCCCCCCC--CCHHHHHHH-HH--HHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHH
Confidence 5688874444443 233333221 11 011123457665 7666 889999999888762 3555555578885
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCccccc-
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQIC- 156 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~- 156 (301)
++..++.+||+|++++|.|..+. ..++..|.+++.++.+ |++.+++.+++++++|++++|+||||.+.
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s 180 (384)
T PRK12414 105 AAISALVHPGDEVIYFEPSFDSYA----PIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFS 180 (384)
T ss_pred HHHHHhcCCCCEEEEeCCCccchH----HHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCC
Confidence 66678999999999999998876 4445567888777753 67899999988899999999999999986
Q ss_pred --cHHHHHHHHHHcCCEEEEeCCcCCccccC----cc-----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHH
Q 022194 157 --DIRKIAEMAHAHGALLLVDNSIMSPVLSR----PL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (301)
Q Consensus 157 --~l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~-----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~ 225 (301)
++++|+++|+++|+++|+||+|....+.. +. ..+..+++.||||.+ |.+|+|.||+++++ .+.+.+.
T Consensus 181 ~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-~~pGlRiG~~v~~~-~l~~~l~ 258 (384)
T PRK12414 181 AADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSY-HVTGWRVGYCLAPA-ELMDEIR 258 (384)
T ss_pred HHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccc-cCccceEEEEecCH-HHHHHHH
Confidence 48889999999999999999997543321 11 123579999999999 66789999999875 4556555
Q ss_pred HhhhhcCCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 226 FLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..........+...+.++...++ ...+.++.+.++++.+.+.|+++
T Consensus 259 ~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 307 (384)
T PRK12414 259 KVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS 307 (384)
T ss_pred HHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55543344444444444444432 23344566777888888888875
No 67
>PLN02483 serine palmitoyltransferase
Probab=99.94 E-value=3.1e-25 Score=202.29 Aligned_cols=253 Identities=16% Similarity=0.198 Sum_probs=177.7
Q ss_pred CccceeeecCCCCCCCCccc-cCeeecceeecCCCCCCCCccccC--CCC-chHHHHHHHHHhhcCCCceEEecchHHHH
Q 022194 8 GVSTLLMNFSNEFDPYGALS-TPLYQTATFKQPSATENGPYDYTR--SGN-PTRDALESLLAKLDKADRALCFTSGMAAL 83 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~-~p~~~~~~~~~~~~~~~~~~~y~~--~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai 83 (301)
+....++||+ ++||||+.. +|.........-. ........++ +|. +..+++++.+++++|.++++++++|+.+.
T Consensus 97 ~~~~~~~n~~-s~~YLgl~~~~~~~~~~~~~ai~-~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an 174 (489)
T PLN02483 97 TKTRRCLNLG-SYNYLGFAAADEYCTPRVIESLK-KYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATN 174 (489)
T ss_pred CCCceEEEee-cCCccCcCCCCHHHHHHHHHHHH-HhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHH
Confidence 3457899999 999999985 3433322211100 0011111333 353 45899999999999999999999998665
Q ss_pred -HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC-------CC-----ce-EEEEeCCC
Q 022194 84 -AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-------PW-----TK-LVWVESPT 149 (301)
Q Consensus 84 -~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~-------~~-----~~-~v~i~~~~ 149 (301)
.++.+++++||.|+++++.|.++. ..++..|++++.++.+|.+++++.++ ++ .+ +|+++...
T Consensus 175 ~~~i~al~~~Gd~Vi~d~~~h~s~~----~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~ 250 (489)
T PLN02483 175 STIIPALIGKGGLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIY 250 (489)
T ss_pred HHHHHHhCCCCCEEEEcchhhHHHH----HHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCC
Confidence 467778999999999999999886 44567899999999888887776653 12 24 55556777
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc----------CccCCCCcEEEecccccccCCCCceeeEEEEcchh
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~----------~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~ 219 (301)
|++|.+.++++|+++|++||+++|+||+|+.+..+ .....+.|++++||||+++ +. +|++++++ .
T Consensus 251 s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g-~~---GG~i~~~~-~ 325 (489)
T PLN02483 251 SMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFG-SC---GGYIAGSK-E 325 (489)
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcc-cC---ceEEEcCH-H
Confidence 99999999999999999999999999999865432 1112357999999999995 43 48888764 5
Q ss_pred HHHHHHHhhhh--cCCCCCHHhHHHHHcccc---------cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 220 LAKELYFLQNA--EGSGLAPFDCWICLRGVK---------TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 220 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.+...... ....+++.....+..+++ ...++++++.++++.+++.|+++
T Consensus 326 li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~ 388 (489)
T PLN02483 326 LIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM 388 (489)
T ss_pred HHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC
Confidence 65655543321 233344444333333332 23456788899999999999886
No 68
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.94 E-value=1e-24 Score=195.35 Aligned_cols=219 Identities=18% Similarity=0.246 Sum_probs=160.6
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCCC-----ceEEecch-HHHHH-HHHhccCC---CCeEEEcCCCCccHHHHHhhh
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKAD-----RALCFTSG-MAALA-AVTHLLGT---GEEIVAGDDLYGGTDRLLSRV 113 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~~-----~~i~~~sG-~~ai~-~~~~~~~~---g~~Vlv~~~~y~~~~~~~~~~ 113 (301)
...|... |.+. ++++.+++.+.+|.+ +.+++++| ++++. ++..++++ ||.|++++|.|..+. ..
T Consensus 58 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~----~~ 133 (396)
T PRK09147 58 LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYE----GA 133 (396)
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchH----HH
Confidence 3456655 6665 888888888776632 36777676 58886 56668899 899999999999886 55
Q ss_pred cccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 114 TPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 114 ~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
++..|.+++.++.+ |++.+++.+.++++++++++|+||||.+.+ +++|+++|++|+++||+||+|....+
T Consensus 134 ~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 213 (396)
T PRK09147 134 ALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYF 213 (396)
T ss_pred HHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccccccc
Confidence 66788889888753 578888877778999999999999999975 78889999999999999999976433
Q ss_pred cCc------c---------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc-
Q 022194 184 SRP------L---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV- 247 (301)
Q Consensus 184 ~~~------~---------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 247 (301)
... . ..+..+++.||||.+ +.+|+|.||+++++ .+.+.+.......+...+...+.++...+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~GlRiG~~~~~~-~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~ 291 (396)
T PRK09147 214 DEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS-NVPGLRSGFVAGDA-ALLKKFLLYRTYHGCAMPPAVQAASIAAWN 291 (396)
T ss_pred CCCCCCchhhhhccccCccccccEEEEecccccc-CCccceeeeecCCH-HHHHHHHHHhhhcccCCCHHHHHHHHHHhc
Confidence 210 0 124569999999998 56789999999874 55565555444444445554444433333
Q ss_pred --ccHHHHHHHHHHHHHHHHHHHHh
Q 022194 248 --KTMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 248 --~~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.+.+.++.+.++++.+.+.|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~L~~ 316 (396)
T PRK09147 292 DEAHVRENRALYREKFDAVTPILAP 316 (396)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 23455667777777778777766
No 69
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1e-24 Score=195.21 Aligned_cols=219 Identities=13% Similarity=0.147 Sum_probs=158.8
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|.+. |.+. ++++.+++.+.++. ++.+++++| ++++. ++..++++||+|++++|.|+.+. ..+...|
T Consensus 67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g 142 (394)
T PRK05942 67 HGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHF----RGPLIAG 142 (394)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHHcC
Confidence 456655 6665 88888888776553 234666666 58885 56678999999999999999886 3345678
Q ss_pred cEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---
Q 022194 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--- 185 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--- 185 (301)
.+++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+..
T Consensus 143 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 222 (394)
T PRK05942 143 AQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQP 222 (394)
T ss_pred CEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCC
Confidence 888887653 678898888889999999999999999987 7889999999999999999987443211
Q ss_pred -----cc-CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHH
Q 022194 186 -----PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVE 255 (301)
Q Consensus 186 -----~~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~ 255 (301)
.. ..+.++++.||||.| |.+|+|.|++++++ .+.+.+.........+.+...+.++...++ .+.+.++
T Consensus 223 ~~~~~~~~~~~~~i~~~SfSK~~-~~~GlRiG~i~~~~-~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 300 (394)
T PRK05942 223 TSLLEIPGAKDIGVEFHTLSKTY-NMAGWRVGFVVGNR-HIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQE 300 (394)
T ss_pred CChhhCCCccccEEEEecchhcc-CChhhheeeeecCH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 11 123568899999999 56789999999864 566666655543333444444444333333 2345556
Q ss_pred HHHHHHHHHHHHHHhC
Q 022194 256 KQQDNAQKIAEFLASH 271 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~ 271 (301)
++.++.+.+.+.|++.
T Consensus 301 ~~~~~~~~~~~~L~~~ 316 (394)
T PRK05942 301 RYRTRRDFLIQGLGEL 316 (394)
T ss_pred HHHHHHHHHHHHHHHC
Confidence 6777777888888764
No 70
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=2e-24 Score=194.78 Aligned_cols=222 Identities=18% Similarity=0.154 Sum_probs=156.5
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
.|++. |.+. ++++.+++.+..+. +++++++++++++. ++..++++||+|++++|.|+.+. ..+...|.+
T Consensus 89 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~----~~~~~~g~~ 164 (430)
T PLN00145 89 SYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYE----ARAVFSGLE 164 (430)
T ss_pred CCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHH----HHHHHcCCE
Confidence 56654 6554 67777777655443 34555555579996 55667899999999999999885 445566777
Q ss_pred EEEecC-------CCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----c
Q 022194 121 VKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P 186 (301)
Q Consensus 121 ~~~~~~-------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~ 186 (301)
++.++. .|++++++.++++++++++++|+||||.+.+ +++|+++|+++|+++|+||+|....+.. +
T Consensus 165 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~ 244 (430)
T PLN00145 165 VRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVP 244 (430)
T ss_pred EEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccc
Confidence 777664 1789999999889999999999999999987 7889999999999999999997544321 1
Q ss_pred ----cCCCCcEEEecccccccCCCCceeeEEEEc-chhHHH------HHHHhhhhcCCCCCHHhHHHHHcccc-----cH
Q 022194 187 ----LELGADIVMHSATKFIAGHSDVMAGVLAVK-GERLAK------ELYFLQNAEGSGLAPFDCWICLRGVK-----TM 250 (301)
Q Consensus 187 ----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~ 250 (301)
......++++||||.| +.+|+|.||+++. ++.+.+ .+..... .....+...+.++...++ .+
T Consensus 245 ~~~~~~~~~vi~~~S~SK~~-~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~ 322 (430)
T PLN00145 245 MGVFGEVAPVLTLGSISKRW-VVPGWRLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFF 322 (430)
T ss_pred hhhhcccCcEEEEecccccc-CCCCeeEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHH
Confidence 1224679999999999 5678999999974 333322 2222221 112233444444433332 35
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 251 ALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.+.++++.++++.+.+.|++++++.
T Consensus 323 ~~~~~~~~~~~~~~~~~L~~~~g~~ 347 (430)
T PLN00145 323 TKTLGLLKETADICYEKIKEIKCIT 347 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 6667788888888999998876553
No 71
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.2e-24 Score=194.06 Aligned_cols=221 Identities=16% Similarity=0.196 Sum_probs=160.5
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|.+. |.+. ++++.+++.+.++.. +.+++++| ++++. ++.+++++||+|++++|.|..+. ..++..|.
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~ 135 (384)
T PRK06348 60 TRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYK----DQIEMVGG 135 (384)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCC
Confidence 456655 6655 778888887665432 44555555 68886 66677899999999999999987 45556677
Q ss_pred EEEEecC-------CCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---c
Q 022194 120 VVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---P 186 (301)
Q Consensus 120 ~~~~~~~-------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---~ 186 (301)
+++.++. .|++++++.+++++++|++++|+||||.+.+ +++|+++|+++++++|+||+|....+.. +
T Consensus 136 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 215 (384)
T PRK06348 136 KPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVP 215 (384)
T ss_pred EEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccc
Confidence 7777763 2678999988888999999999999999975 7889999999999999999998543321 1
Q ss_pred ---cC--CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc----HHHHHHHH
Q 022194 187 ---LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQ 257 (301)
Q Consensus 187 ---~~--~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~ 257 (301)
.. .+.++++.||||.+ +.+|+|.||+++++ .+.+.+.........+.+...+.++...+.. +.+.++.+
T Consensus 216 ~~~~~~~~~~vi~~~SfSK~~-~l~GlRiG~~v~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 293 (384)
T PRK06348 216 MATLAGMPERTITFGSFSKDF-AMTGWRIGYVIAPD-YIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEF 293 (384)
T ss_pred hhhcCCCcCcEEEEecchhcc-CCccccceeeecCH-HHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 11 34679999999999 55689999999874 5666665555544444555554444433322 34555667
Q ss_pred HHHHHHHHHHHHhCCC
Q 022194 258 QDNAQKIAEFLASHPR 273 (301)
Q Consensus 258 ~~~~~~l~~~l~~~~~ 273 (301)
.++++.+.+.|++++.
T Consensus 294 ~~r~~~~~~~L~~~~~ 309 (384)
T PRK06348 294 QKRLEYAYKRIESIPN 309 (384)
T ss_pred HHHHHHHHHHHhcCCC
Confidence 7777888888887654
No 72
>PRK08068 transaminase; Reviewed
Probab=99.94 E-value=1.3e-24 Score=194.22 Aligned_cols=219 Identities=14% Similarity=0.134 Sum_probs=156.8
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC--C-c-eEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA--D-R-ALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~--~-~-~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|++. |.+. ++++.+++.+.+|. + + .+++++| ++++. ++..++++||+|++++|+|..+. ..++..|
T Consensus 64 ~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g 139 (389)
T PRK08068 64 HKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYL----SGVALAR 139 (389)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHhcC
Confidence 456554 6655 77777777665553 2 3 4555555 57775 56777899999999999999886 5566788
Q ss_pred cEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---
Q 022194 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--- 185 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--- 185 (301)
++++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|+++|+++++++|+||+|....+..
T Consensus 140 ~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~ 219 (389)
T PRK08068 140 AQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKP 219 (389)
T ss_pred CEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCC
Confidence 888888863 567888888878999999999999999987 5678889999999999999996432211
Q ss_pred ------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc----cccHHHHHH
Q 022194 186 ------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG----VKTMALRVE 255 (301)
Q Consensus 186 ------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~ 255 (301)
.......+++.||||.| |.+|+|.||+++++ .+.+.+.........+..+..+.++... .+.+++.++
T Consensus 220 ~s~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~-~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 297 (389)
T PRK08068 220 VSFLQTPGAKDVGIELYTLSKTF-NMAGWRVAFAVGNE-SVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVA 297 (389)
T ss_pred cChhhCCCccCCEEEEecchhcc-CCccceeEeEecCH-HHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHH
Confidence 11123569999999999 66889999999764 5656555544433333332222222222 234566677
Q ss_pred HHHHHHHHHHHHHHhC
Q 022194 256 KQQDNAQKIAEFLASH 271 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~ 271 (301)
++.++++.+.+.|+++
T Consensus 298 ~~~~~r~~~~~~L~~~ 313 (389)
T PRK08068 298 RYESRRNAFISACREI 313 (389)
T ss_pred HHHHHHHHHHHHHHHC
Confidence 7888888888888775
No 73
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.94 E-value=1.6e-24 Score=190.99 Aligned_cols=218 Identities=20% Similarity=0.257 Sum_probs=160.2
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC--C-c-eEEecchH-HHHH-HHHhccCCC---CeEEEcCCCCccHHHHHhhhccc
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA--D-R-ALCFTSGM-AALA-AVTHLLGTG---EEIVAGDDLYGGTDRLLSRVTPK 116 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~--~-~-~i~~~sG~-~ai~-~~~~~~~~g---~~Vlv~~~~y~~~~~~~~~~~~~ 116 (301)
.|... |.+. ++++.+++.+.+|. + + .+++++|+ +++. ++..++++| |+|++++|.|..+. ..++.
T Consensus 31 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~----~~~~~ 106 (350)
T TIGR03537 31 QYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYE----RGALF 106 (350)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchH----HHHHh
Confidence 46554 6655 88888888777663 2 3 67777775 8885 556678877 69999999999997 55678
Q ss_pred CCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccCc
Q 022194 117 TGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP 186 (301)
Q Consensus 117 ~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~~ 186 (301)
.|++++.++.+ |+++++++++++++++++++|+||||.+.+ +++|+++|+++|+++|+||+|....+...
T Consensus 107 ~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 186 (350)
T TIGR03537 107 AGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP 186 (350)
T ss_pred cCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC
Confidence 89999988763 678999988889999999999999999987 88899999999999999999975433211
Q ss_pred ----c--CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc---ccHHHHHHHH
Q 022194 187 ----L--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQ 257 (301)
Q Consensus 187 ----~--~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~ 257 (301)
. ..+..+++.|+||.+ |.+|+|.|+++.+ +.+.+.+.......+...+.....++...+ +.+.+.++++
T Consensus 187 ~~~~~~~~~~~~i~~~s~SK~~-g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l 264 (350)
T TIGR03537 187 PHSALEVGIENVLAFHSLSKRS-GMTGYRSGFVAGD-EKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIF 264 (350)
T ss_pred CCchhhcCcCCEEEEeeccccc-CCccccceeeecC-HHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 1 234579999999999 5678999999875 456666655544444444433333332222 3345666777
Q ss_pred HHHHHHHHHHHHhC
Q 022194 258 QDNAQKIAEFLASH 271 (301)
Q Consensus 258 ~~~~~~l~~~l~~~ 271 (301)
.++...+.+.|+++
T Consensus 265 ~~~~~~~~~~l~~~ 278 (350)
T TIGR03537 265 KRKRDLFIEFFNKV 278 (350)
T ss_pred HHHHHHHHHHHHHC
Confidence 88888888888764
No 74
>PLN02656 tyrosine transaminase
Probab=99.93 E-value=2.6e-24 Score=193.30 Aligned_cols=258 Identities=16% Similarity=0.130 Sum_probs=172.3
Q ss_pred CccceeeecCCCCCCC-C-ccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecch
Q 022194 8 GVSTLLMNFSNEFDPY-G-ALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSG 79 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~-g-~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG 79 (301)
.....+++|+.+...+ . ...++.+.... . ..........|++. |.+. ++++.+++.+.+|. +++++++++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~-~-~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 105 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAV-V-DALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGC 105 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHH-H-HHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCCh
Confidence 4456888988443332 1 22223233221 1 11111123457655 6655 77777777765443 344555555
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCC
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
++++. ++..++++||+|++++|.|+.+. ......|++++.++.+ |++++++.++++++++++++|+||
T Consensus 106 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NP 181 (409)
T PLN02656 106 TQAIDVALSMLARPGANILLPRPGFPIYE----LCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNP 181 (409)
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCcHH----HHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCC
Confidence 68885 56667899999999999998875 4445578888877752 678899888888999999999999
Q ss_pred ccccc---cHHHHHHHHHHcCCEEEEeCCcCCccccC----c----cCCCCcEEEecccccccCCCCceeeEEEEcc---
Q 022194 152 RQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSR----P----LELGADIVMHSATKFIAGHSDVMAGVLAVKG--- 217 (301)
Q Consensus 152 ~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~~----~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~--- 217 (301)
||.+. ++++|+++|+++|+++|+||+|....+.. + ......+++.||||.| +.+|+|.||+++++
T Consensus 182 tG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f-~~pGlRiG~~i~~~~~~ 260 (409)
T PLN02656 182 CGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRW-IVPGWRLGWFVTTDPSG 260 (409)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhc-cCcceeEEEEEEeCccc
Confidence 99996 58889999999999999999998544321 1 1224579999999998 56789999999852
Q ss_pred ----hhHHHHHHHhhhhcCCCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 218 ----ERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 218 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
+.+.+.+....... ...+...+.++...++ .+.+.++.+.++++.+.+.|+.++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~ 324 (409)
T PLN02656 261 SFRDPKIVERIKKYFDIL-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPC 324 (409)
T ss_pred ccccHHHHHHHHHHHhhh-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 35555555443322 2234444444433332 3556667778888888888887644
No 75
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.7e-24 Score=193.17 Aligned_cols=222 Identities=25% Similarity=0.302 Sum_probs=162.0
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcC--C--CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDK--A--DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~--~--~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|.+. |.+. ++++.+++.+.+| . ++.+++++|++++. ++..++++||+|++++|.|..+. ..++..|.
T Consensus 55 ~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~ 130 (382)
T PRK06108 55 TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLV----AAPKILGA 130 (382)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchH----HHHHHCCC
Confidence 346655 6665 8888888888777 2 34455555578886 55667899999999999999886 45567788
Q ss_pred EEEEecCC--------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc-C--
Q 022194 120 VVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-R-- 185 (301)
Q Consensus 120 ~~~~~~~~--------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~-~-- 185 (301)
+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+...+. .
T Consensus 131 ~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~ 210 (382)
T PRK06108 131 RVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGR 210 (382)
T ss_pred EEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCC
Confidence 88888763 678999988888999999999999999874 788999999999999999998755432 0
Q ss_pred ------cc-CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc----ccHHHHH
Q 022194 186 ------PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRV 254 (301)
Q Consensus 186 ------~~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~ 254 (301)
.. ....++++.||||.+ |.+|+|.|++++++ .+.+.+...........+...+.++...+ +.+.+.+
T Consensus 211 ~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 288 (382)
T PRK06108 211 APSFLDIAEPDDRIIFVNSFSKNW-AMTGWRLGWLVAPP-ALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELV 288 (382)
T ss_pred CCCHhhcCCCcCCEEEEeechhhc-cCcccceeeeeCCH-HHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHH
Confidence 01 124579999999999 56688999999875 45555544433333444444444433333 2345666
Q ss_pred HHHHHHHHHHHHHHHhCCCc
Q 022194 255 EKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~v 274 (301)
+++.++.+.+.+.|++++++
T Consensus 289 ~~~~~~~~~l~~~L~~~~~~ 308 (382)
T PRK06108 289 ARLRRSRDHLVDALRALPGV 308 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 77778888888888876554
No 76
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=2.7e-24 Score=192.06 Aligned_cols=219 Identities=20% Similarity=0.176 Sum_probs=154.9
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC--C-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA--D-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~--~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|.+. |.+. ++.+.+++.+.+|. + +.+++++| ++++. ++..++++||+|++++|.|+.+.. .+...|.
T Consensus 63 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~----~~~~~g~ 138 (387)
T PRK08960 63 TRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH----FLRLVEG 138 (387)
T ss_pred CccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCC
Confidence 345544 6555 67777777665443 2 44555555 69986 566678999999999999999874 3445566
Q ss_pred EEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
+++.++.+ |++++++.++++++++++++|+||||.+.+ +++|+++|+++|+++|+||+|....+..
T Consensus 139 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~ 218 (387)
T PRK08960 139 AAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAAS 218 (387)
T ss_pred eEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 77666642 578999988888999999999999999986 6678888999999999999987543221
Q ss_pred ccC-CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc-----ccHHHHHHHHHH
Q 022194 186 PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMALRVEKQQD 259 (301)
Q Consensus 186 ~~~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~ 259 (301)
... ....++++||||.+ |.+|+|.||+++++ .+.+.+...........+...+.++...+ +.+.+.++.+.+
T Consensus 219 ~~~~~~~vi~~~S~SK~~-g~~GlRiG~~~~~~-~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~ 296 (387)
T PRK08960 219 VLEVDDDAFVLNSFSKYF-GMTGWRLGWLVAPP-AAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFAR 296 (387)
T ss_pred hhhccCCEEEEeeccccc-CCcccEEEEEEcCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHH
Confidence 111 23568999999999 56789999999875 45565555544444444444443333322 335556677788
Q ss_pred HHHHHHHHHHhC
Q 022194 260 NAQKIAEFLASH 271 (301)
Q Consensus 260 ~~~~l~~~l~~~ 271 (301)
+++.+.+.|+++
T Consensus 297 ~~~~l~~~L~~~ 308 (387)
T PRK08960 297 RRDFLLPALREL 308 (387)
T ss_pred HHHHHHHHHHhc
Confidence 888898998875
No 77
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2e-24 Score=193.22 Aligned_cols=222 Identities=18% Similarity=0.243 Sum_probs=159.8
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|.+. |.+. ++++.+++.+.+|. ++.++++++++++. ++..++++||+|++++|+|..+. ..+...|.
T Consensus 64 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~----~~~~~~g~ 139 (391)
T PRK08361 64 THYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYV----EDAKIAEA 139 (391)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccH----HHHHHcCC
Confidence 345444 6555 66777777665553 34555555578885 66678899999999999999886 45556788
Q ss_pred EEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|+++|+++++++|+||+|....+..
T Consensus 140 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 219 (391)
T PRK08361 140 KPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHY 219 (391)
T ss_pred EEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCC
Confidence 88887652 689999999888999999999999999998 8889999999999999999997543321
Q ss_pred c---cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc------cHHHHHHH
Q 022194 186 P---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK------TMALRVEK 256 (301)
Q Consensus 186 ~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~ 256 (301)
+ .....++++.|+||.+ |.+|+|.|++++++ .+.+.+...........+...+.++...++ .+.+.++.
T Consensus 220 ~~~~~~~~~~i~~~s~SK~~-~~~GlRiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 297 (391)
T PRK08361 220 PMIKYAPDNTILANSFSKTF-AMTGWRLGFVIAPE-QVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKE 297 (391)
T ss_pred CHhhcCCCCEEEEecCchhc-CCcHhhhhhhccCH-HHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHH
Confidence 1 1224679999999999 55789999999975 455555444443334444444444333332 24556677
Q ss_pred HHHHHHHHHHHHHhCCCc
Q 022194 257 QQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v 274 (301)
+.++.+.+.+.|++++++
T Consensus 298 ~~~~~~~~~~~L~~~~~~ 315 (391)
T PRK08361 298 YNERRKLVLKRLKEMPHI 315 (391)
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 778888888999876554
No 78
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=4.9e-24 Score=193.85 Aligned_cols=217 Identities=16% Similarity=0.221 Sum_probs=156.6
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----C-ceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcc-cC
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----D-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KT 117 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~-~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~-~~ 117 (301)
.|... |.+. ++++.+++.+.++. + +.|++++|+ +++. ++..+++|||.|++++|.|..+. ..+. ..
T Consensus 81 ~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~----~~~~~~~ 156 (468)
T PLN02450 81 LFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFD----RDLKWRT 156 (468)
T ss_pred cCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchH----HHHhhcC
Confidence 35555 6655 78888888776552 2 456677775 8885 66778899999999999999986 3333 57
Q ss_pred CcEEEEecCC-------CHHHHHhhcCC------CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 118 GVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 118 g~~~~~~~~~-------d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
|++++.++.+ |++.+++++.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+..
T Consensus 157 g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~ 236 (468)
T PLN02450 157 GVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGT 236 (468)
T ss_pred CcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccccc
Confidence 8888888753 56788877643 7899999999999999986 777899999999999999999854
Q ss_pred cccC-----cc------------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHH
Q 022194 182 VLSR-----PL------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (301)
Q Consensus 182 ~~~~-----~~------------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
.+.. .. ..+..+++.||||.| +.+|+|.|+++++++.+.+.+...... ...+...+.++.
T Consensus 237 ~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~Q~a~~ 313 (468)
T PLN02450 237 VFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDL-GLPGFRVGAIYSNDEMVVSAATKMSSF--GLVSSQTQYLLS 313 (468)
T ss_pred ccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccC-CCCCccEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHHHH
Confidence 3221 00 134679999999999 667899999999876665554443322 223444444444
Q ss_pred cccc-------cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 245 RGVK-------TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 245 ~~l~-------~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..++ .+.+.++++.++.+.+.+.|+++
T Consensus 314 ~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 314 ALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4432 24556677888888888888875
No 79
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=3.1e-24 Score=190.06 Aligned_cols=222 Identities=28% Similarity=0.316 Sum_probs=171.0
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecch-HHHHHHH-Hhc---cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSG-MAALAAV-THL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG-~~ai~~~-~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
..++.++.++++++++ +.|+++.| |++++.+ ..+ +++||+|++++..|++....|....++.|+++++++.+
T Consensus 67 ~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~ 146 (405)
T COG0520 67 LYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD 146 (405)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC
Confidence 3788899999999976 55666666 5888744 444 68899999999999999999999999999999999965
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
+.+++++.+++++++|.+++.+|.||.+.|+++|+++||++|+++++|.+++.+..+ +..+.++|++++|.|||+
T Consensus 147 ~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl 226 (405)
T COG0520 147 DGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWL 226 (405)
T ss_pred CCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccc
Confidence 689999999999999999999999999999999999999999999999999999876 456789999999999988
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhh---------------------hcC-CCCCHHhHHHHHccccc-----HHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQN---------------------AEG-SGLAPFDCWICLRGVKT-----MALRVE 255 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~~~~~~~~~~l~~-----~~~~~~ 255 (301)
.||.| .|+++++++.+.+ +..... ... .+.+......+..+++. +.+..+
T Consensus 227 ~gP~G--iGvLy~r~~~l~~-l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~ 303 (405)
T COG0520 227 LGPTG--IGVLYVRKELLEE-LEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEA 303 (405)
T ss_pred cCCCc--eEEEEEchHHHhh-cCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHH
Confidence 89988 5999998765533 211000 000 11122222222223332 234445
Q ss_pred HHHHHHHHHHHHHHhCCCcceEecCC
Q 022194 256 KQQDNAQKIAEFLASHPRVKKVNYAG 281 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~v~~v~~p~ 281 (301)
+..+..+++.+.|+++|+++ ++.|.
T Consensus 304 ~e~~L~~~~~~~L~~~~~v~-i~g~~ 328 (405)
T COG0520 304 HERELTEYLLEGLSELPGVE-IYGPP 328 (405)
T ss_pred HHHHHHHHHHHHHhcCCCeE-EecCC
Confidence 66677788888999999875 44443
No 80
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.93 E-value=3.2e-24 Score=187.45 Aligned_cols=231 Identities=19% Similarity=0.225 Sum_probs=161.1
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecch-HHHHHHHHhcc
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG-MAALAAVTHLL 90 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG-~~ai~~~~~~~ 90 (301)
.+++|++..+++|...+++ .... ...|. .+. .+|++.++++++.++ |++++| .+++..+. .+
T Consensus 21 ~~i~l~~ne~p~~~~~~~~-~~~~----------~~~yp---~~~-~~Lr~~ia~~~~~~~-I~it~Gs~~al~~~~-~~ 83 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAI-PADA----------WARLP---ETD-DGLEAAARAYYGAPQ-LLPVAGSQAAIQALP-RL 83 (330)
T ss_pred HheeecCCcCCCCCCCccc-CHHH----------HHhCC---CCh-HHHHHHHHHHhCCCC-EEECcCHHHHHHHHH-Hc
Confidence 5788885547777654432 1111 00122 222 788999999999875 555555 58887554 45
Q ss_pred CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHH
Q 022194 91 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHA 167 (301)
Q Consensus 91 ~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~ 167 (301)
.+||+|++++|+|+.+. ..++..|.+++.++.+ ++++.++ +++++++++|+||||.+.+ +++|+++|++
T Consensus 84 ~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~v~~~---~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~ 155 (330)
T PRK05664 84 RAPGRVGVLSPCYAEHA----HAWRRAGHQVRELDEA---EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAA 155 (330)
T ss_pred cCCCEEEEcCCChHHHH----HHHHHcCCeEEEechh---hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHh
Confidence 79999999999999996 6677889999999854 4555553 6788999999999999986 6667777899
Q ss_pred cCCEEEEeCCcCCcccc----CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHH
Q 022194 168 HGALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (301)
Q Consensus 168 ~~~~li~D~~~~~~~~~----~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
+++++|+||+|...... ........++++||||.+ |.+|+|.||+++++ .+.+.+..... .+..+.....++
T Consensus 156 ~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~-gl~GlRiG~~v~~~-~l~~~~~~~~~--~~~~~~~~~~~~ 231 (330)
T PRK05664 156 RGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFF-GLAGARLGFVLAEP-ALLRALAELLG--PWTVSGPTRWLA 231 (330)
T ss_pred cCCEEEEECCcccCCCcccccccccCCCEEEEeeccccc-cCCCcceEEEEeCH-HHHHHHHHhcC--CCCCCHHHHHHH
Confidence 99999999999643211 111224569999999999 66789999999874 55565544432 233445544454
Q ss_pred Hccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 244 LRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 244 ~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
...+.. ..+.++++.++++.+.+.|+++
T Consensus 232 ~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 232 QAALADTPWQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 444433 3455677777888899999875
No 81
>PRK06855 aminotransferase; Validated
Probab=99.93 E-value=5.9e-24 Score=192.08 Aligned_cols=225 Identities=19% Similarity=0.228 Sum_probs=154.2
Q ss_pred CCccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecch-HHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 45 GPYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 45 ~~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..+.|.+. |.+. |+++.+++++.+|.+ +.+++++| ++++..+..++++||.|++++|.|+.+... .....|
T Consensus 65 ~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~l~~~Gd~Vlv~~P~Y~~~~~~---~~~~~g 141 (433)
T PRK06855 65 KSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGLLRREARVIGPSPAYSTHSSA---EAAHAG 141 (433)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHHhcCCCCeEEEeCCCCchHHHH---HHHhcC
Confidence 44567776 7766 888999988876542 45555665 588875556889999999999999987421 122346
Q ss_pred cEEEEecCC-------CHHHHHhhcC--CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-
Q 022194 119 VVVKRVNTC-------DLDEVASAIG--PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR- 185 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~--~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~- 185 (301)
+.++.++.+ |++++++.++ ++++++++++|+||||.+.+ +++|+++|++||++||+||+|....+..
T Consensus 142 ~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~ 221 (433)
T PRK06855 142 YPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK 221 (433)
T ss_pred CeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 666655432 7899999886 46789999999999999986 7778899999999999999997554321
Q ss_pred ---c----cCCCCcEEEecccccccCCCCceeeEEEEcc----hhHHHHHHHhhhh--cCCCCCHHhHHHHHcccc----
Q 022194 186 ---P----LELGADIVMHSATKFIAGHSDVMAGVLAVKG----ERLAKELYFLQNA--EGSGLAPFDCWICLRGVK---- 248 (301)
Q Consensus 186 ---~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~---- 248 (301)
+ ...+..++++||||.+ +.+|+|.||+++++ +.+.+.+...... .....+...+.++...++
T Consensus 222 ~~~sl~~~~~~~~~I~~~S~SK~~-~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~ 300 (433)
T PRK06855 222 KTVPLSEVIGDVPGIALKGISKEL-PWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEY 300 (433)
T ss_pred CCCCHHHHcCcCCeEEEecCcccc-CCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcH
Confidence 1 1112469999999999 55789999999832 2222222222111 112234444444444442
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 249 --TMALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 249 --~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
.+.+.++.+.++++.+.+.|+++++
T Consensus 301 ~~~~~~~~~~~~~r~~~~~~~L~~~~~ 327 (433)
T PRK06855 301 KNYLKERNKRYEKRSNIAYEKLKDVPG 327 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2455667778888888888877644
No 82
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=3.8e-24 Score=191.13 Aligned_cols=250 Identities=21% Similarity=0.207 Sum_probs=170.8
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCCC---c-eEEecch-HHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKAD---R-ALCFTSG-MAAL 83 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~-~i~~~sG-~~ai 83 (301)
...++|+.+....+. +|.+....... . ......|.+. |.+. ++++.+++.+.+|.+ + .+++++| ++++
T Consensus 26 ~~~i~l~~g~p~~~~--p~~~~~~~~~~--~-~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 100 (387)
T PRK08912 26 HGAINLGQGFPDDPG--PEDVRRAAADA--L-LDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEAL 100 (387)
T ss_pred CCeEEccCCCCCCCC--CHHHHHHHHHH--H-hcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHH
Confidence 367888844444432 23333221111 1 1123456665 6665 788888887766532 2 4555555 6888
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
. ++..++++||+|++++|.|..+. ..++..|.+++.++.+ |++++++.+.++++++++++|+||||.+.
T Consensus 101 ~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~ 176 (387)
T PRK08912 101 AAALLALVEPGDEVVLFQPLYDAYL----PLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVF 176 (387)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCccc
Confidence 5 66677899999999999999886 5567788888877653 67999999988899999999999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCccccC--------c-cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLSR--------P-LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--------~-~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
+ +++|+++|+++++++|+||+|....+.. . ...+.+++++|+||.+ |.+|+|.|++++++ .+.+.+
T Consensus 177 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~-~~~~~l 254 (387)
T PRK08912 177 PREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIF-SLTGWKVGFVCAAP-PLLRVL 254 (387)
T ss_pred CHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhc-cCcCceeEEEecCH-HHHHHH
Confidence 6 7779999999999999999986433221 1 1124689999999999 66789999999875 455555
Q ss_pred HHhhhhcCCCCCHHhHHHHHccc----ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 225 YFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.........+.++....++...+ +.+.+.++++.++.+.+.+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 305 (387)
T PRK08912 255 AKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI 305 (387)
T ss_pred HHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 54444333333333333332222 234566677788888888888875
No 83
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=4e-24 Score=197.25 Aligned_cols=254 Identities=17% Similarity=0.179 Sum_probs=165.0
Q ss_pred ceeeecCCCC-CCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcC--CC-ceEEecch-HHHH
Q 022194 11 TLLMNFSNEF-DPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDK--AD-RALCFTSG-MAAL 83 (301)
Q Consensus 11 ~~~~~~~~~~-~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~--~~-~~i~~~sG-~~ai 83 (301)
..+++|+.++ ++++...++.+........ . ....|++. |.+. |+++.+++.+..+ .+ +.|++++| ++++
T Consensus 146 ~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~--~--~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal 221 (517)
T PRK13355 146 THILKLNIGNPAPFGFRTPDEVVYDMAQQL--T--DTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELI 221 (517)
T ss_pred CCeEEecCcCCCcCCCCCCHHHHHHHHHHh--h--cCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHH
Confidence 3567777433 4456544554443321111 1 22346665 6554 7777777755443 22 45666666 5888
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccc
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~ 155 (301)
. ++..++++||+|++++|.|..+. ..++..|.+++.++.+ |++++++++.+++++|++++|+||||.+
T Consensus 222 ~~~~~~l~~~Gd~Vli~~P~y~~y~----~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v 297 (517)
T PRK13355 222 NLSMSALLDDGDEVLIPSPDYPLWT----ACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGAL 297 (517)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcCHH----HHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcC
Confidence 5 66778999999999999999986 5556778888777642 7899999998899999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----ccCC---CCcEEEecccccccCCCCceeeEEEEcc-hh----
Q 022194 156 CD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLEL---GADIVMHSATKFIAGHSDVMAGVLAVKG-ER---- 219 (301)
Q Consensus 156 ~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~~~---~~di~~~S~sK~~~g~~g~~~g~~~~~~-~~---- 219 (301)
.+ +++|+++|++||++||+||+|....+.. .... ...++++||||.+ +.+|+|.||++++. +.
T Consensus 298 ~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~-~~~G~RiG~~i~~~~~~~~~~ 376 (517)
T PRK13355 298 YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSH-MIAGYRIGWMILSGNKRIAKD 376 (517)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhc-cCcccceEEEEeeCchhhHHH
Confidence 87 8889999999999999999987544321 1111 1246679999999 66789999998642 22
Q ss_pred HHHHHHHhhhhcCCCCCHHhHHHHHcccc---cHHHH---HHHHHHHHHHHHHHHHhCCCc
Q 022194 220 LAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALR---VEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~---~~~~~~~~~~l~~~l~~~~~v 274 (301)
+.+.+..... .....+...+.++...+. .+.+. ..++.++++.+.+.|++++++
T Consensus 377 ~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 436 (517)
T PRK13355 377 YIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGI 436 (517)
T ss_pred HHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 2232222222 112233344444433332 12222 234556677788888877554
No 84
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=6.2e-24 Score=190.75 Aligned_cols=220 Identities=17% Similarity=0.125 Sum_probs=155.7
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC--C-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA--D-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~--~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|++. |.+. ++++.+++.+.+|. + +.+++++| ++++. ++..++++||.|++++|.|+.+. ..+...|.
T Consensus 68 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~----~~~~~~g~ 143 (409)
T PLN00143 68 NSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVE----TYAIFHHL 143 (409)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHH----HHHHHcCC
Confidence 447554 7665 78888888776543 2 45555566 58886 66667899999999999999986 55567788
Q ss_pred EEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
+++.++.. |+++++++++++++++++++|+||||.+.+ +++|+++|+++++++|+||+|....+..
T Consensus 144 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 223 (409)
T PLN00143 144 EIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFV 223 (409)
T ss_pred EEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCc
Confidence 88887642 789999988888999999999999999986 7788999999999999999997544321
Q ss_pred c----cCCCCcEEEecccccccCCCCceeeEEEEc-chhHHH------HHHHhhhhcCCCCCHHhHHHHHcccc-----c
Q 022194 186 P----LELGADIVMHSATKFIAGHSDVMAGVLAVK-GERLAK------ELYFLQNAEGSGLAPFDCWICLRGVK-----T 249 (301)
Q Consensus 186 ~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~-----~ 249 (301)
+ ......+++.||||.| +.+|+|.||++++ ++.+.+ .+......... .+...+.++...++ .
T Consensus 224 ~~~~~~~~~~vi~~~SfSK~f-~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~~~~~ 301 (409)
T PLN00143 224 PMGLFASIVPVITLGSISKRW-MIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKTTEDF 301 (409)
T ss_pred chhhhcccCcEEEEccchhhc-CCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcChHHH
Confidence 1 1123579999999999 5678999999984 333322 22222221121 23334444433332 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Q 022194 250 MALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
+.+.++++.++.+.+.+.|++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~L~~~~ 324 (409)
T PLN00143 302 FSKTINILRAALAFCYDKLKEIP 324 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 56667777777888888887754
No 85
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.93 E-value=1.5e-24 Score=189.55 Aligned_cols=214 Identities=19% Similarity=0.216 Sum_probs=160.4
Q ss_pred ccCCCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 49 YTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 49 y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
+..++.+...+++++++++++.+ +.+++++|+ +++.++..++.+| .|++++|.|+.+. ..++..|++++.++
T Consensus 41 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~~- 114 (330)
T TIGR01140 41 WARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLLAPG-RVLVLAPTYSEYA----RAWRAAGHEVVELP- 114 (330)
T ss_pred HhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEeC-
Confidence 33444444688999999999875 667777775 7787777778888 6999999999886 55668899999988
Q ss_pred CCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-cc----CCCCcEEEecc
Q 022194 127 CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-PL----ELGADIVMHSA 198 (301)
Q Consensus 127 ~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~----~~~~di~~~S~ 198 (301)
|++++++.+ .++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....... .. ..+.++++.|+
T Consensus 115 -d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~ 192 (330)
T TIGR01140 115 -DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSL 192 (330)
T ss_pred -CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEec
Confidence 899999888 46789999999999999987 7778889999999999999997544321 11 23567999999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
||++ |++|+|.|+++++++ +.+.+..... .+..+...+.++...++. ....++++.++.+.+.+.|++++.+
T Consensus 193 SK~~-g~~G~R~G~i~~~~~-~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 267 (330)
T TIGR01140 193 TKFF-GLAGLRLGFVVAHPA-LLARLREALG--PWTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGL 267 (330)
T ss_pred chhh-cCchhhhhheeCCHH-HHHHHHhcCC--CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999 567899999998754 5555544332 334455555555444432 3455677888888899999887644
No 86
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.93 E-value=4.7e-24 Score=193.04 Aligned_cols=217 Identities=14% Similarity=0.118 Sum_probs=156.0
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCCCceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEE
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKADRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR 123 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~ 123 (301)
.|+.. |.+. ++.+.+++.+..+.++.+++++| ++++. ++..+++|||.|++++|+|+.+. ..++..|++++.
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~----~~~~~~g~~~~~ 191 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSI----NMLRYAGFSASP 191 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCeEEe
Confidence 35443 5443 55555555543444445666666 58886 66678899999999999999996 666778899988
Q ss_pred ecCC----CHHHHHhhcCCCceEEEEe-CCCCCccccccH---HHHHHHHHHc-CCEEEEeCCcCCcccc---Ccc--CC
Q 022194 124 VNTC----DLDEVASAIGPWTKLVWVE-SPTNPRQQICDI---RKIAEMAHAH-GALLLVDNSIMSPVLS---RPL--EL 189 (301)
Q Consensus 124 ~~~~----d~~~l~~~l~~~~~~v~i~-~~~np~G~~~~l---~~l~~l~~~~-~~~li~D~~~~~~~~~---~~~--~~ 189 (301)
++.+ |++.+++++++++++++++ +||||||.+.+. ++|+++|+++ +++||+||+|...... ... ..
T Consensus 192 v~~~~~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 271 (431)
T PRK15481 192 VSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTT 271 (431)
T ss_pred eccCCCCCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCC
Confidence 8864 6889999888788988887 999999999875 5899999999 9999999998743321 111 22
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQK 263 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~ 263 (301)
...++++||||.| + +|+|.||+++++ .+.+.+...........+...+.++...++. +.+.++.+.++.+.
T Consensus 272 ~~vi~~~SfSK~~-~-~GlRiG~~i~~~-~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~ 348 (431)
T PRK15481 272 QRWALIRSVSKAL-G-PDLRLAFVASDS-ATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQK 348 (431)
T ss_pred CCEEEEeeecccc-C-CCceeEEEeCCH-HHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 4679999999999 4 689999999874 4555554433333333455555554444322 45566778888888
Q ss_pred HHHHHHhC
Q 022194 264 IAEFLASH 271 (301)
Q Consensus 264 l~~~l~~~ 271 (301)
+.+.|+++
T Consensus 349 ~~~~L~~~ 356 (431)
T PRK15481 349 LARALQQY 356 (431)
T ss_pred HHHHHHHc
Confidence 88888864
No 87
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.93 E-value=1.8e-24 Score=188.64 Aligned_cols=244 Identities=18% Similarity=0.259 Sum_probs=184.3
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-CC-ceEEecchH-HHHH-HHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-AD-RALCFTSGM-AALA-AVT 87 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~-~~-~~i~~~sG~-~ai~-~~~ 87 (301)
..++|++..+++|+. |.+........+ .+.+|.++...++++.++++++ .+ +.++++.|+ +.|. .+.
T Consensus 23 ~~i~LssNenP~gp~--~~~~~~~~~~~~-------~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~ 93 (356)
T COG0079 23 GIIKLSSNENPYGPP--PKVIEAIRAALD-------KLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVR 93 (356)
T ss_pred cceeecCCCCCCCCC--HHHHHHHHHHHH-------hhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHH
Confidence 688998888888855 433332211100 2334445568899999999998 55 677778887 7776 667
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC----CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
.++.+||+|+++.|+|..|. ..++..|++++.++. .|++.+.+.+.+++++|++++||||||...+.++|.+
T Consensus 94 ~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~ 169 (356)
T COG0079 94 AFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRA 169 (356)
T ss_pred HhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 78999999999999999986 667889999999997 4788899888889999999999999999998777777
Q ss_pred HHHHc--CCEEEEeCCcCCccccCcc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCH
Q 022194 164 MAHAH--GALLLVDNSIMSPVLSRPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 237 (301)
Q Consensus 164 l~~~~--~~~li~D~~~~~~~~~~~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
++... +.++|+||+|....-.... .....+++.||||+| |.+|+|.|+.+++ +.+.+.+..... .+.++.
T Consensus 170 l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~-gLAGlRlGy~ia~-~~~i~~l~~vr~--p~~v~~ 245 (356)
T COG0079 170 LLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAF-GLAGLRVGYAIAN-PELIAALNKVRP--PFNVSS 245 (356)
T ss_pred HHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhh-hcchhceeeccCC-HHHHHHHHHhcC--CCCCCH
Confidence 77654 8899999999754432211 344579999999999 7899999998776 456675555554 455555
Q ss_pred HhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhCC
Q 022194 238 FDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 238 ~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
.+..++..+++ .+.+.++...+.++++.+.|++++
T Consensus 246 ~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 246 PALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 65555555443 456777888888899999999876
No 88
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=4.7e-24 Score=190.00 Aligned_cols=219 Identities=16% Similarity=0.195 Sum_probs=160.0
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|.+. |.+. ++++.+++.+.+|. ++.+++++| ++|+. ++..++++||+|++++|+|+.+. ..++..|
T Consensus 51 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g 126 (378)
T PRK07682 51 TSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYA----PLVTLAG 126 (378)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhH----HHHHHcC
Confidence 446554 6655 78888888776554 234555555 68886 56678899999999999999886 4445567
Q ss_pred cEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---
Q 022194 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--- 185 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--- 185 (301)
.++..++.+ |++++++++.++++++++++|+||||.+.+ +++|+++|++|++++|+||+|....+..
T Consensus 127 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 206 (378)
T PRK07682 127 GVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYT 206 (378)
T ss_pred CEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCC
Confidence 777777642 689999999888999999999999999975 8889999999999999999988554321
Q ss_pred -----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHH
Q 022194 186 -----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEK 256 (301)
Q Consensus 186 -----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~ 256 (301)
......++++.||||.| +.+|+|.||+++++ .+.+.+...........+...+.++...++ .+.+.++.
T Consensus 207 ~~~~~~~~~~~~i~~~S~SK~~-~~~GlR~G~~~~~~-~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 284 (378)
T PRK07682 207 SFASIKGMRERTILISGFSKGF-AMTGWRLGFIAAPV-YFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDS 284 (378)
T ss_pred ChhhcccccCCEEEEecCcccc-cChhhhhhhhhcCH-HHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHH
Confidence 11124679999999999 55789999999875 466655544444334445555444444432 34556677
Q ss_pred HHHHHHHHHHHHHhC
Q 022194 257 QQDNAQKIAEFLASH 271 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (301)
+.++++.+.+.|+++
T Consensus 285 ~~~~~~~~~~~L~~~ 299 (378)
T PRK07682 285 YRKRRNFFVTSFNEI 299 (378)
T ss_pred HHHHHHHHHHHHHHC
Confidence 788888899999875
No 89
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.93 E-value=5.4e-24 Score=190.50 Aligned_cols=249 Identities=18% Similarity=0.231 Sum_probs=170.4
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----C--ceEEecch-HH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----D--RALCFTSG-MA 81 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~--~~i~~~sG-~~ 81 (301)
...++|+.+.+.+++ ++.+.... .. .. .....|.+. |.+. ++++.+++.+.++. + +.+++++| ++
T Consensus 28 ~~~i~l~~~~p~~~~--~~~~~~a~-~~-~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~ 101 (393)
T TIGR03538 28 KPPIALSIGEPKHPT--PAFVLEAL-RE-NL--HGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE 101 (393)
T ss_pred CCeEEecCCCCCCCC--CHHHHHHH-HH-Hh--hccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH
Confidence 467788744444442 23333221 11 11 123456655 6665 88888888776542 2 35777777 58
Q ss_pred HHH-HHHhccCCCCe--EEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCC
Q 022194 82 ALA-AVTHLLGTGEE--IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 82 ai~-~~~~~~~~g~~--Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
++. ++..+++|||. |++++|.|..+. ..+...|++++.++.+ |++++++++.+++++|++++|+||
T Consensus 102 al~~~~~~l~~~gd~~~vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NP 177 (393)
T TIGR03538 102 ALFAFAQAVINPGQAPLVVMPNPFYQIYE----GAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNP 177 (393)
T ss_pred HHHHHHHHHcCCCCcceEEecCCCCcchH----HHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCC
Confidence 886 55667899986 999999999886 5566788888888752 678888888778999999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC---c------------cCCCCcEEEecccccccCCCCceeeEE
Q 022194 152 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---P------------LELGADIVMHSATKFIAGHSDVMAGVL 213 (301)
Q Consensus 152 ~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---~------------~~~~~di~~~S~sK~~~g~~g~~~g~~ 213 (301)
||.+.+ +++|+++|++||++||+||+|....+.. + ......+++.||||.+ +.+|+|.||+
T Consensus 178 tG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~~~GlRvG~~ 256 (393)
T TIGR03538 178 TGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRS-NLPGLRSGFV 256 (393)
T ss_pred cCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhc-CCcccceEEE
Confidence 999986 7889999999999999999987543221 0 0123569999999998 5678999999
Q ss_pred EEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 214 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++++ .+.+.+.......+...+...+.++...+. .+.+.++.+.++.+.+.+.|+++
T Consensus 257 i~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 257 AGDA-EILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV 316 (393)
T ss_pred ecCH-HHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9874 455555544443444445444444333332 34555667777777788888764
No 90
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.93 E-value=1.4e-23 Score=176.56 Aligned_cols=228 Identities=22% Similarity=0.314 Sum_probs=177.2
Q ss_pred CCCCCccccCCCCc-hHHHHHHHHHhhcCCC---ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcc
Q 022194 42 TENGPYDYTRSGNP-TRDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 42 ~~~~~~~y~~~g~~-~~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
...+.++|+ ++.. ..+++.++.++.++.+ +.++++.| ..+++ ++..+.++||.|++..|.|+++. ...+
T Consensus 51 vdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~----~~i~ 125 (388)
T COG1168 51 VDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFY----NAIK 125 (388)
T ss_pred HhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHH----HHHh
Confidence 355778888 6555 4899999999998754 56766666 58886 77889999999999999999997 6777
Q ss_pred cCCcEEEEecCC--------CHHHHHhhcCC-CceEEEEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 116 KTGVVVKRVNTC--------DLDEVASAIGP-WTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 116 ~~g~~~~~~~~~--------d~~~l~~~l~~-~~~~v~i~~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
..|.++...++. |++++|+++.. +++++++|+||||+|.+. ++.+|+++|++||+.+|.||+|...++
T Consensus 126 ~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~ 205 (388)
T COG1168 126 LNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVL 205 (388)
T ss_pred hcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccc
Confidence 888899888864 89999998875 579999999999999996 589999999999999999999986544
Q ss_pred cC----------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHH-HHHhhhhcCCCCCHHhHHH----HHcccc
Q 022194 184 SR----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-LYFLQNAEGSGLAPFDCWI----CLRGVK 248 (301)
Q Consensus 184 ~~----------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~l~ 248 (301)
.. +......+.+.|.||+| ..+|+..+.++.+++.+..+ ++.+.......++.+...+ ..++-.
T Consensus 206 ~g~~h~~~a~ls~~~a~~~it~~saSKtF-NlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~ 284 (388)
T COG1168 206 GGHKHIPFASLSERFADNSITLTSASKTF-NLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEP 284 (388)
T ss_pred cCCCccchhhcChhhhcceEEEeeccccc-cchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchH
Confidence 32 11123569999999999 67899999999988877443 3333333334444444333 344556
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhC-CCcc
Q 022194 249 TMALRVEKQQDNAQKIAEFLASH-PRVK 275 (301)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~-~~v~ 275 (301)
++.+..+.+..|..++.+.+.++ |.++
T Consensus 285 WLd~L~~yl~~N~~~~~~~l~~~~P~v~ 312 (388)
T COG1168 285 WLDELLEYLKDNRDYVADFLNKHLPGVK 312 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 78888899999999999999874 5653
No 91
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=8.2e-24 Score=189.48 Aligned_cols=222 Identities=21% Similarity=0.268 Sum_probs=161.0
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
.|... |.+. ++++.+++.+.++. ++.++++++++++. ++..++++||.|++++|.|..+. ..++..|.+
T Consensus 63 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~ 138 (393)
T PRK05764 63 KYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYP----EMVKLAGGV 138 (393)
T ss_pred CcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCCE
Confidence 45544 4433 56666666555443 24444555568886 56667899999999999999886 455677888
Q ss_pred EEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----
Q 022194 121 VKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----- 185 (301)
Q Consensus 121 ~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----- 185 (301)
+..++.+ |++++++++++++++|++++|+||||.+.+ +++|+++|++||+++|+||+|+...+..
T Consensus 139 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~ 218 (393)
T PRK05764 139 PVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTS 218 (393)
T ss_pred EEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCccc
Confidence 8888764 578999999888999999999999999965 8889999999999999999987543311
Q ss_pred -----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHH
Q 022194 186 -----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEK 256 (301)
Q Consensus 186 -----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~ 256 (301)
....+.++++.|+||++ +.+|+|.|+++.+ +.+.+.+...........++..++++.+.++ .+.+.+++
T Consensus 219 ~~~~~~~~~~~~i~~~s~SK~~-~~~G~RiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 296 (393)
T PRK05764 219 IASLSPELRDRTITVNGFSKAY-AMTGWRLGYAAGP-KELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQA 296 (393)
T ss_pred HHHcCCCCcCCEEEEecCcccc-cCccceeEEEecC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHH
Confidence 12235789999999999 6568899999976 4566666555554455556665555544443 24455667
Q ss_pred HHHHHHHHHHHHHhCCCcc
Q 022194 257 QQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v~ 275 (301)
+.++...+.+.|++++++.
T Consensus 297 ~~~~~~~l~~~L~~~~g~~ 315 (393)
T PRK05764 297 FEERRDLMVDGLNEIPGLE 315 (393)
T ss_pred HHHHHHHHHHHHhhCCCCc
Confidence 7778888899998875543
No 92
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.93 E-value=6.6e-24 Score=194.26 Aligned_cols=224 Identities=18% Similarity=0.215 Sum_probs=156.3
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecch-HHHHH-HHHhcc-CCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~-~~~~~~-~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|++. |.+. ++++.+++.+..|.+ +.|++++| ++++. ++..++ ++||.|++++|.|+.+. ..++..|
T Consensus 109 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~----~~~~~~g 184 (481)
T PTZ00377 109 GAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYS----AAITLLG 184 (481)
T ss_pred cCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHH----HHHHHcC
Confidence 446665 7765 888888887765532 45666666 58886 455666 69999999999999997 5556777
Q ss_pred cEEEEecCC-------CHHHHHhhcCC------CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 119 VVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
.+++.++.+ |++++++++.+ +++++++++|+||||.+.+ +++|+++|+++|++||+||+|....
T Consensus 185 ~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~ 264 (481)
T PTZ00377 185 GKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENI 264 (481)
T ss_pred CEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhc
Confidence 888877653 57889888763 7899999999999999987 8889999999999999999997544
Q ss_pred ccC--c--------cCC-------CCcEEEecccccccCCCCceeeEEEE--cchhHHHHHHHhhhhcCCCCCHHhHHHH
Q 022194 183 LSR--P--------LEL-------GADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCWIC 243 (301)
Q Consensus 183 ~~~--~--------~~~-------~~di~~~S~sK~~~g~~g~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
+.. + ... ...++++||||.+.+.+|+|.||+++ .++.+.+.+...... ....+...+.++
T Consensus 265 ~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~-~~~~~~~~Q~a~ 343 (481)
T PTZ00377 265 YDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASI-NLCSNVVGQLMT 343 (481)
T ss_pred cCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhhe-ecCCChHHHHHH
Confidence 311 1 011 13589999999865778999999987 245666666554432 223444444443
Q ss_pred Hcccc-------c---H----HHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 244 LRGVK-------T---M----ALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 244 ~~~l~-------~---~----~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
...++ . + .+.++.+.++++.+.+.|++++++.
T Consensus 344 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~ 389 (481)
T PTZ00377 344 GLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS 389 (481)
T ss_pred HHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 33331 1 1 1222345677778888998876543
No 93
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.93 E-value=1.2e-23 Score=189.35 Aligned_cols=221 Identities=17% Similarity=0.178 Sum_probs=155.9
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcC--------C-CceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhh
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDK--------A-DRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRV 113 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~--------~-~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~ 113 (301)
..|.+. |.+. ++++.+++.+.++ . ++.+++++| ++++. ++..++++||+|++++|+|..+. ..
T Consensus 69 ~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~----~~ 144 (412)
T PTZ00433 69 NGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYE----TV 144 (412)
T ss_pred CCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHH----HH
Confidence 456655 6655 7777777765432 2 244555555 68886 56667899999999999999986 55
Q ss_pred cccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 114 TPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 114 ~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
++..|++++.++.+ |++++++++++++++|++++|+||||.+.+ +++|+++|+++|++||+||+|....+
T Consensus 145 ~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 224 (412)
T PTZ00433 145 CKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVF 224 (412)
T ss_pred HHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccccccc
Confidence 67788888888753 678999888888999999999999999865 78889999999999999999975433
Q ss_pred cC--------ccCCCCcEEEecccccccCCCCceeeEEEEcc-----hhHHHHHHHhhhhcCCCCCHHhHHHHHccc---
Q 022194 184 SR--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKG-----ERLAKELYFLQNAEGSGLAPFDCWICLRGV--- 247 (301)
Q Consensus 184 ~~--------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--- 247 (301)
.. .......++++||||.+ |.+|+|.||+++.+ +.+.+.+...... ....+...+.++...+
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~SfSK~~-~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~ 302 (412)
T PTZ00433 225 NGATFTSVADFDTTVPRVILGGTAKNL-VVPGWRLGWLLLVDPHGNGGDFLDGMKRLGML-VCGPCSVVQAALGEALLNT 302 (412)
T ss_pred CCCCccchhhccCCCceEEEccchhhc-CCCCeeEEEEEEeCCcccHHHHHHHHHHHhhc-cCCCChHHHHHHHHHHhcC
Confidence 21 01112468999999999 56789999999721 2344444443322 2334444444433332
Q ss_pred --ccHHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 248 --KTMALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 248 --~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
..+.+.++++.++.+.+.+.|+++.+
T Consensus 303 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 330 (412)
T PTZ00433 303 PQEHLEQIVAKLEEGAMVLYNHIGECIG 330 (412)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 23456667778888888888887543
No 94
>PRK09148 aminotransferase; Validated
Probab=99.93 E-value=7.8e-24 Score=189.98 Aligned_cols=250 Identities=16% Similarity=0.138 Sum_probs=166.3
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecch-HHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSG-MAALA 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG-~~ai~ 84 (301)
.+++|+.++..++. ++...... .. .........|.+. |.+. ++++.+++.+.+|. ++.+++++| ++++.
T Consensus 31 ~~i~l~~~~p~~~~--~~~~~~~~-~~-~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 106 (405)
T PRK09148 31 DIIDLGMGNPDLPT--PQHIVDKL-CE-TAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA 106 (405)
T ss_pred CeEEcCCCCCCCCC--CHHHHHHH-HH-HHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 56788844444443 23222221 11 1111123456665 6655 88888888776553 325666666 58886
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhc---CCCceEEEEeCCCCCccccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAI---GPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l---~~~~~~v~i~~~~np~G~~~ 156 (301)
++..++++||+|++++|.|+.+. ..+...|+++..++.+ ..+++++.+ .++++++++++|+||||.+.
T Consensus 107 ~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~ 182 (405)
T PRK09148 107 NMAQAITAPGDVILCPNPSYPIHA----FGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVA 182 (405)
T ss_pred HHHHHhcCCCCEEEEcCCCCcccH----HHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCC
Confidence 56667899999999999999986 4445678898888764 233444443 46789999999999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCccccC-----cc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
+ +++|+++|+++|+++|+||+|....+.. .. ..+..+++.||||.+ |.+|+|.||+++++ .+.+.+
T Consensus 183 s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~-~~pGlR~G~~v~~~-~~i~~l 260 (405)
T PRK09148 183 DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF-SMAGWRMGFAVGNE-RLIAAL 260 (405)
T ss_pred CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc-CCcchheeeeeCCH-HHHHHH
Confidence 7 5779999999999999999997533211 11 123467899999999 66789999999864 566666
Q ss_pred HHhhhhcCCCCCHHhHHHHHccc----ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 225 YFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.........+.+...+.++...+ +.+.+.++.+.++...+.+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 311 (405)
T PRK09148 261 TRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA 311 (405)
T ss_pred HHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 65554434333343433333333 234556677788888888888774
No 95
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=5.6e-24 Score=189.31 Aligned_cols=251 Identities=18% Similarity=0.146 Sum_probs=176.2
Q ss_pred ccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC--CCc-hHHHHHHHHHhhcCCCceEEecchHHHH-H
Q 022194 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNP-TRDALESLLAKLDKADRALCFTSGMAAL-A 84 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~~-~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~ 84 (301)
....+++|+ +|||||+..+|.+.......-+. ...+..-++. |.. ..+++|+.|++++|.++++++++|..|. .
T Consensus 100 ~~r~~l~Fs-SndYLGL~~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~ 177 (476)
T PLN02955 100 RFKKLLLFS-GNDYLGLSSHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMA 177 (476)
T ss_pred CCceEEEee-ccCccCCCCCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHH
Confidence 346899999 99999999999988664332110 0111112222 543 3789999999999999999999998665 3
Q ss_pred HHHhc--------------cCCCCeEEEcCCCCccHHHHHhhhcccC-CcEEEEecCCCHHHHHhhcC---CCceEEEEe
Q 022194 85 AVTHL--------------LGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIG---PWTKLVWVE 146 (301)
Q Consensus 85 ~~~~~--------------~~~g~~Vlv~~~~y~~~~~~~~~~~~~~-g~~~~~~~~~d~~~l~~~l~---~~~~~v~i~ 146 (301)
++..+ ..+++.|+.....|.+..... ...+.. +.++..+..+|+++++++++ .+.++|+++
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~-~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~E 256 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGV-RLAERQGNVEVFVYRHCDMYHLNSLLSSCKMKRKVVVTD 256 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHH-HhccccCCceEEEeCCCCHHHHHHHHHhCCCCceEEEEe
Confidence 44333 134556666656666665433 223332 57888888999999998885 346788888
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC---------ccCCCCcEEEecccccccCCCCceeeEEEEcc
Q 022194 147 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (301)
Q Consensus 147 ~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~ 217 (301)
...++.|.+.|+++|.++|++||+++|+||+|+.+.++. ......|++++||+|+++. ++|++++++
T Consensus 257 gV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~----~GGfi~gs~ 332 (476)
T PLN02955 257 SLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGC----HGGFIACSK 332 (476)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhc----cCceeecHH
Confidence 999999999999999999999999999999999776643 1123578999999999954 468888775
Q ss_pred hhHHHHHHHhhhh--cCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHH
Q 022194 218 ERLAKELYFLQNA--EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 218 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~ 267 (301)
.+.+.+...... ++..+++..+.+++.+++.+ .+++++++++.+++++.
T Consensus 333 -~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~ 386 (476)
T PLN02955 333 -KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL 386 (476)
T ss_pred -HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 455655443322 33455555555555555443 45678888888888774
No 96
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=2.9e-24 Score=192.81 Aligned_cols=250 Identities=20% Similarity=0.172 Sum_probs=170.4
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccC--CCC-chHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR--SGN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
.++++|+ +|||+|+..+|.+.......-+..... ..-++ +|. +...++++.+++++|.++++++++|++|+. ++
T Consensus 45 ~~~~~~~-sn~ylgl~~~p~v~~a~~~~~~~~~~~-~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai 122 (402)
T TIGR01821 45 KDVTVWC-SNDYLGMGQHPEVLQAMHETLDKYGAG-AGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATL 122 (402)
T ss_pred eeEEEeE-ccCcCCCCCCHHHHHHHHHHHHHcCCC-CcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHH
Confidence 4588999 999999999998776543321111000 01112 243 458999999999999889999999998875 44
Q ss_pred HhccC--CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC----CCceEEEEeCCCCCccccccHHH
Q 022194 87 THLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 87 ~~~~~--~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
..+.+ +++.|+.....|.... ..+...++++..++..|.+++++.++ +++++|++++++||+|.+.|+++
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~ 198 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMI----EGIRHSGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEE 198 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHH----HHHHHcCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHH
Confidence 44443 5666655444444333 22345567776776677877777775 36789999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCccccCc---------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh--
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-- 229 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~~~---------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~-- 229 (301)
|.++|+++|+++|+||+|+.|.+... .....|++++|++|+++++ +|++++++ .+.+.+.....
T Consensus 199 i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~----GG~i~~~~-~~~~~l~~~~~~~ 273 (402)
T TIGR01821 199 ICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV----GGYIAASR-KLIDAIRSYAPGF 273 (402)
T ss_pred HHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccC----CceeecCH-HHHHHHHHhCcCc
Confidence 99999999999999999986544211 1123589999999999643 47777664 45555443222
Q ss_pred hcCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 230 AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+..+.++..++++..+++.+ .+..+++.++.+++.+.|+++
T Consensus 274 ~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 274 IFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred eecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 123445666666665555543 344556667888899988864
No 97
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.93 E-value=3.8e-24 Score=191.87 Aligned_cols=249 Identities=17% Similarity=0.173 Sum_probs=176.4
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccC----CCCch-HHHHHHHHHhhcCCCceEEecchHHHHH-
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR----SGNPT-RDALESLLAKLDKADRALCFTSGMAALA- 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~----~g~~~-~~~l~~~l~~~~~~~~~i~~~sG~~ai~- 84 (301)
..+++|+ +++|+|..++|.+.......-. ...+.+.. .|.+. +++++++++++++.++.+++++|++++.
T Consensus 42 ~~~i~l~-~~~~~~~~~~~~i~~a~~~~~~---~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~ 117 (397)
T PRK06939 42 KEVINFC-ANNYLGLANHPELIAAAKAALD---SHGFGMASVRFICGTQDLHKELEEKLAKFLGTEDAILYSSCFDANGG 117 (397)
T ss_pred CeEEEee-ccCccccCCCHHHHHHHHHHHH---HcCCCCcccccccCCcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHH
Confidence 3689998 6788898888877654322211 11222221 25554 8999999999999888999999987774
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC------CceEEEEeCCCCCccccccH
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDI 158 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l 158 (301)
++..++++||+|++++|.|+++.. .+...+.++..++..|++++++.+++ ++++|++.+.+|++|...++
T Consensus 118 ~~~~l~~~gd~vi~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~ 193 (397)
T PRK06939 118 LFETLLGKEDAIISDALNHASIID----GVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPL 193 (397)
T ss_pred HHHHhCCCCCEEEEEhhhhHHHHH----HHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCH
Confidence 666789999999999999998863 33455667777777788888887753 67788888889999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCccccC---------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh
Q 022194 159 RKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~ 229 (301)
++|+++|+++|+++|+||+|+.+.... ....+.|++++|+||+++|+ ++|++++++ .+.+.+.....
T Consensus 194 ~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~---r~G~v~~~~-~~~~~l~~~~~ 269 (397)
T PRK06939 194 PEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA---SGGYTAGRK-EVIDWLRQRSR 269 (397)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc---CceEEEeCH-HHHHHHHHhCc
Confidence 999999999999999999996543321 11124689999999999543 579998875 45554443222
Q ss_pred --hcCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 230 --AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 230 --~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..+.+..+..+.++..+++.+ .+.++++.++.+.+.+.|+++
T Consensus 270 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 270 PYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred cccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 122333344344333333332 455677888888888888764
No 98
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=2.7e-24 Score=193.48 Aligned_cols=251 Identities=19% Similarity=0.147 Sum_probs=172.3
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCc-cccCCCCc-hHHHHHHHHHhhcCCCceEEecchHHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPY-DYTRSGNP-TRDALESLLAKLDKADRALCFTSGMAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~-~y~~~g~~-~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~ 87 (301)
..+++|+ +|||+|+.++|.+.......-+......- ....+|.. ...+|++.+++++|.++.+++++|++|+. ++.
T Consensus 46 ~~~~~~~-sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~ 124 (410)
T PRK13392 46 RRVTIWC-SNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAALS 124 (410)
T ss_pred ceEEEEE-CCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHH
Confidence 3578999 89999999999877654322111000000 01112443 47899999999999999999999997764 444
Q ss_pred hcc--CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC----CCceEEEEeCCCCCccccccHHHH
Q 022194 88 HLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 88 ~~~--~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
.+. .+|+.|++....|.++. ..+...|.++..++.+|.+.+++.+. +++++|++++|+||+|.+.|+++|
T Consensus 125 ~l~~~~~g~~vi~~~~~h~s~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i 200 (410)
T PRK13392 125 TLGKLLPGCVILSDALNHASMI----EGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAI 200 (410)
T ss_pred HHhcCCCCCEEEEehhhhHHHH----HHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHH
Confidence 343 47888887666665554 33455677777777667766666553 578999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCcCCccccCc---------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh--
Q 022194 162 AEMAHAHGALLLVDNSIMSPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-- 230 (301)
Q Consensus 162 ~~l~~~~~~~li~D~~~~~~~~~~~---------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-- 230 (301)
.++|+++|+++|+||+|+.+.+... .....|+++.|+||+|+++ +|+++++ +.+.+.+......
T Consensus 201 ~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~----GG~~~~~-~~~~~~l~~~~~~~~ 275 (410)
T PRK13392 201 CDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL----GGYIAAS-ADLIDFVRSFAPGFI 275 (410)
T ss_pred HHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc----cchhhcC-HHHHHHHHHhCcchh
Confidence 9999999999999999986654211 1123579999999999653 3777765 4555655443332
Q ss_pred cCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 231 EGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 231 ~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+...++..++++..+++. ..+..+++.++++++.+.|++.
T Consensus 276 ~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (410)
T PRK13392 276 FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN 319 (410)
T ss_pred ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 2233444555554444443 3445567788888899988864
No 99
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.92 E-value=1e-23 Score=189.26 Aligned_cols=222 Identities=19% Similarity=0.186 Sum_probs=151.8
Q ss_pred ccccCC-CCch-HHHHHHHHHhhc---CCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLD---KADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~---~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
..|.+. |.+. ++++.+++.+.. ..+++++++++++++. ++..++++||+|++++|.|..+. ..++..|++
T Consensus 67 ~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~ 142 (401)
T TIGR01264 67 NGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGIE 142 (401)
T ss_pred CCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCE
Confidence 346544 5544 555665555421 2234444445568885 66678899999999999998886 556778888
Q ss_pred EEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----c
Q 022194 121 VKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P 186 (301)
Q Consensus 121 ~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~ 186 (301)
+..++.+ |++.+++.+++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+.. +
T Consensus 143 v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~ 222 (401)
T TIGR01264 143 VKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEP 222 (401)
T ss_pred EEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCccccc
Confidence 8887642 688999888888899999999999999975 8889999999999999999997543321 1
Q ss_pred ---c-CCCCcEEEecccccccCCCCceeeEEEEcch-----hHHHHHHHhhhhcCCCCCHHhHHHHHccc-----ccHHH
Q 022194 187 ---L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----RLAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMAL 252 (301)
Q Consensus 187 ---~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~ 252 (301)
. .....+++.||||.| +.+|+|.||++++++ .+.+.+..... .....+...+.++...+ +.+.+
T Consensus 223 ~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~ 300 (401)
T TIGR01264 223 LASLSSTVPILSCGGLAKRW-LVPGWRLGWIIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDG 300 (401)
T ss_pred HHHcCCCCcEEEEccCcccC-CCccceEEEEEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHH
Confidence 1 112368999999998 567899999998742 12222222221 12223333333333322 33556
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc
Q 022194 253 RVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~v 274 (301)
.++++.++.+.+.+.|++++++
T Consensus 301 ~~~~~~~~r~~l~~~L~~~~~~ 322 (401)
T TIGR01264 301 TLSVLESNAMLCYGALAAVPGL 322 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCC
Confidence 6677888888899999887553
No 100
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=4.3e-24 Score=190.54 Aligned_cols=261 Identities=17% Similarity=0.162 Sum_probs=179.9
Q ss_pred CCccceeeecCCCCCCCCccccCeeecceeecCCCCCCC---CccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHH
Q 022194 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENG---PYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~---~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai 83 (301)
+..+-.++++. .-.-+|+..+....+..-.... .... .+.......+..+++++.+++++|.++++++++|++++
T Consensus 14 ~~~~~~~~~~~-~~~~~~p~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~ 91 (387)
T PRK09331 14 RRLEEEFINLD-PIQRGGILTPEARKALIEYGDG-YSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGK 91 (387)
T ss_pred ccccccccccC-hhhcCCCCCHHHHHHHHHHHhc-cCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHH
Confidence 44556677766 4444665544443332211110 0000 11111112356899999999999999888888888888
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-------CCHHHHHhhcCC-------CceEEEEeCC
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGP-------WTKLVWVESP 148 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~-------~~~~v~i~~~ 148 (301)
. ++..++++||+|+++.+.|.+... .++..|++++.++. .|++++++.+++ ++++|+++++
T Consensus 92 ~~al~~l~~~gd~Vlv~~~~h~s~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~ 167 (387)
T PRK09331 92 FAVMHSLCKKGDYVVLDGLAHYTSYV----AAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHV 167 (387)
T ss_pred HHHHHHhcCCCCEEEECCCchHHHHH----HHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECC
Confidence 5 677788999999999998887753 34667889998876 278999988852 6899999999
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~ 227 (301)
+|++|...|+++|+++||++|+++++|++|+.|..+ .....++|++++|+||++++|+ ++|+++++++ +.+.+...
T Consensus 168 ~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~--~~G~l~~~~~-~i~~~~~~ 244 (387)
T PRK09331 168 DGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASA--PSGVLATTEE-YADKVFRT 244 (387)
T ss_pred CCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCC--CEEEEEECHH-HHhhcccc
Confidence 999999999999999999999999999999988754 3445689999999999997765 4689988754 43433222
Q ss_pred hh--------hcCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhCCCcce
Q 022194 228 QN--------AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 228 ~~--------~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~v~~ 276 (301)
.. ..+.+..+...+.++.+++.+ .++.++..++++++++.|++++++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~ 304 (387)
T PRK09331 245 SRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQ 304 (387)
T ss_pred cCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 11 112223222233333333332 23456667888899999998876643
No 101
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.92 E-value=2.1e-23 Score=186.44 Aligned_cols=218 Identities=14% Similarity=0.189 Sum_probs=154.6
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----CceEEe-cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----DRALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~-~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
.|.+. |.+. ++++.+++...++. ++.+++ +++++++. ++..++++||+|++++|.|.++. ..++..|.
T Consensus 62 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~ 137 (391)
T PRK07309 62 HYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYE----PIVNLVGA 137 (391)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCC
Confidence 36554 5555 77777777766553 234555 44568885 66677899999999999999986 55566788
Q ss_pred EEEEecCC------CHHHHHhhcCC---CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC--
Q 022194 120 VVKRVNTC------DLDEVASAIGP---WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-- 185 (301)
Q Consensus 120 ~~~~~~~~------d~~~l~~~l~~---~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-- 185 (301)
+++.++.+ |++.++++++. +++++++++|+||||.+.+ +++|+++|++||+++|+|++|....+..
T Consensus 138 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~ 217 (391)
T PRK07309 138 EIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEP 217 (391)
T ss_pred EEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCC
Confidence 88888753 67889888863 6899999999999999875 8889999999999999999997544311
Q ss_pred --c-c--CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc----HHHHHHH
Q 022194 186 --P-L--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEK 256 (301)
Q Consensus 186 --~-~--~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~ 256 (301)
+ . ..+..+++.|+||.+ |.+|+|.||++++++ +.+.+...........+...+.++...++. ....++.
T Consensus 218 ~~~~~~~~~~~~i~~~S~SK~~-g~~GlRvG~~v~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 295 (391)
T PRK07309 218 HVSIAEYLPDQTILINGLSKSH-AMTGWRIGLIFAPAE-FTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKE 295 (391)
T ss_pred CCCHHHhccCCEEEEecChhhc-cCccceeEEEEeCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHH
Confidence 1 1 124569999999999 567899999998855 545554443333333444444444444432 2334456
Q ss_pred HHHHHHHHHHHHHhC
Q 022194 257 QQDNAQKIAEFLASH 271 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (301)
+.++++.+.+.|+++
T Consensus 296 ~~~~~~~~~~~l~~~ 310 (391)
T PRK07309 296 YIKRRDYIIEKMTDL 310 (391)
T ss_pred HHHHHHHHHHHHHHC
Confidence 677777788888765
No 102
>PRK07777 aminotransferase; Validated
Probab=99.92 E-value=1.3e-23 Score=187.69 Aligned_cols=219 Identities=22% Similarity=0.206 Sum_probs=155.3
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC-----ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD-----RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~-----~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|.+. |.+. ++++.+++.+.+|.+ +.+++++|++++. ++..++++||+|++..|.|+.+. ..++..|
T Consensus 55 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~----~~~~~~g 130 (387)
T PRK07777 55 NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYA----AVIAMAG 130 (387)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHCC
Confidence 456654 6655 777777777777653 3444555578885 66778899999999999999886 4445567
Q ss_pred cEEEEecC--------CCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC--
Q 022194 119 VVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-- 185 (301)
Q Consensus 119 ~~~~~~~~--------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-- 185 (301)
.+++.++. .|++++++.+.+++++|++++|+||||.+.+ +++|+++|+++++++|+||+|....+..
T Consensus 131 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~ 210 (387)
T PRK07777 131 AHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGAR 210 (387)
T ss_pred CEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCC
Confidence 77766654 2678999988888999999999999999864 8889999999999999999997533211
Q ss_pred -------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHH---HHc-ccccHHHHH
Q 022194 186 -------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI---CLR-GVKTMALRV 254 (301)
Q Consensus 186 -------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~l~~~~~~~ 254 (301)
+...+.++++.|+||.| |.+|+|.|++++++ .+.+.+...........+...+.+ ++. ..+.+.+.+
T Consensus 211 ~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 288 (387)
T PRK07777 211 HLPLATLPGMRERTVTISSAAKTF-NVTGWKIGWACGPA-PLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALR 288 (387)
T ss_pred cccHhhCCCCcCcEEEEeechhhc-cCcCceeEEEecCH-HHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHH
Confidence 11135789999999999 55689999999875 455555444433232222222222 222 223345566
Q ss_pred HHHHHHHHHHHHHHHhC
Q 022194 255 EKQQDNAQKIAEFLASH 271 (301)
Q Consensus 255 ~~~~~~~~~l~~~l~~~ 271 (301)
+.+.++++.+.+.|+++
T Consensus 289 ~~~~~~~~~l~~~L~~~ 305 (387)
T PRK07777 289 DSLQAKRDRLAAGLAEA 305 (387)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 77888888899998875
No 103
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.2e-24 Score=190.85 Aligned_cols=245 Identities=16% Similarity=0.213 Sum_probs=172.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~ 87 (301)
...++|+.+.+++++. |.+.... .... ....| +.+...++++.++++++.+ +.+++++|+ +++. ++.
T Consensus 52 ~~~i~l~~n~~p~~~~--~~v~~a~-~~~~----~~~~Y---p~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 52 EDIVKLDANENPYGPP--PEVLEAL-GNMK----FPYVY---PDPESRRLRAALAEDSGLESENILVGCGADELIDLLMR 121 (380)
T ss_pred cceEEccCCCCCCCCC--HHHHHHH-HhhH----hhccC---CCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHH
Confidence 4678888544566644 3333321 1100 11123 2334678999999999865 566777775 8886 555
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhc-CCCceEEEEeCCCCCccccccHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l-~~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
.++++||+|++++|.|+.+. ..++..|.+++.++.+ |++++++++ .+++++|++++|+||||.+.+.+++
T Consensus 122 ~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l 197 (380)
T PLN03026 122 CVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDL 197 (380)
T ss_pred HhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHH
Confidence 67899999999999998775 4456678888888753 688999888 6789999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCcCCcccc-----CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCC
Q 022194 162 AEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (301)
Q Consensus 162 ~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
.++++.. +++|+||+|...... ........+++.||||.| |.+|+|.|++++++ .+.+.+..... .+..+
T Consensus 198 ~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~-glaGlRiGy~~~~~-~~i~~l~~~~~--~~~~~ 272 (380)
T PLN03026 198 LKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRA-GLAGLRVGYGAFPL-SIIEYLWRAKQ--PYNVS 272 (380)
T ss_pred HHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhh-cCccccceeeecCH-HHHHHHHHhcC--CCCCC
Confidence 9999765 999999998643221 111335689999999999 77899999999875 45455444433 23455
Q ss_pred HHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 237 PFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 237 ~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
...+.++...++ .+.+.++.+.++++++.+.|++++.+
T Consensus 273 ~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 313 (380)
T PLN03026 273 VAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFL 313 (380)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 555555544443 34556677788888888999876543
No 104
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=6.9e-24 Score=187.72 Aligned_cols=251 Identities=22% Similarity=0.230 Sum_probs=177.3
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCcccc-CCCC-chHHHHHHHHHhhcCCCceEEecchHHHH-HHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGN-PTRDALESLLAKLDKADRALCFTSGMAAL-AAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~ 87 (301)
.++++|+ +++++|...+|.+.......-.........+. ..|. +...++++.++++++.++.+++++|++++ .++.
T Consensus 16 ~~~id~~-~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~ 94 (360)
T TIGR00858 16 RRLLNFS-SNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFSSGYLANVGVIS 94 (360)
T ss_pred ceEEecc-cCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHH
Confidence 4799999 56889987777666553322110000101111 1244 34888999999999988899999998665 4666
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC----CceEEEEeCCCCCccccccHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~----~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
.++++||+|++++|.|..+. ..++..|.+++.++..|++++++.++. ++++|++.+++|++|...++++|.+
T Consensus 95 ~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~ 170 (360)
T TIGR00858 95 ALVGKGDLILSDALNHASLI----DGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVA 170 (360)
T ss_pred HhCCCCCEEEEEccccHHHH----HHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHH
Confidence 77899999999999998886 344566788888888889999988863 4688888999999999999999999
Q ss_pred HHHHcCCEEEEeCCcCCccccC----------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh--c
Q 022194 164 MAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--E 231 (301)
Q Consensus 164 l~~~~~~~li~D~~~~~~~~~~----------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~--~ 231 (301)
+|+++|+++|+||+|+.+.+.. ....+.+++++|+||++++ + +|++++++ .+.+.+...... .
T Consensus 171 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~---gG~~~~~~-~~~~~~~~~~~~~~~ 245 (360)
T TIGR00858 171 LAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS-Y---GAYVAGSQ-ALIDYLINRARTLIF 245 (360)
T ss_pred HHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc-c---CcEEEcCH-HHHHHHHHhCcccee
Confidence 9999999999999998654321 1123678999999999954 3 37887764 455544322221 2
Q ss_pred CCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 232 GSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+...++....++..+++ ...+.++++.++.+++.+.|+++
T Consensus 246 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 246 STALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred cCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 23344444444444443 23456678888888999999875
No 105
>PRK09082 methionine aminotransferase; Validated
Probab=99.92 E-value=3.4e-24 Score=191.33 Aligned_cols=219 Identities=20% Similarity=0.217 Sum_probs=161.1
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC----ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD----RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~----~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|.+. |.+. ++++.+++.+.++.+ +.+++++| ++++. ++..++++||+|++++|.|..+. ..++..|
T Consensus 61 ~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~----~~~~~~g 136 (386)
T PRK09082 61 NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYA----PAIELAG 136 (386)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhH----HHHHHcC
Confidence 456554 6665 888999998887753 24555555 68885 66677899999999999999886 4445678
Q ss_pred cEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 119 VVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 119 ~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
.++..++.+ |++++++.+++++++|++++|+||||.+. ++++|+++|+++|+++|+||+|....+..
T Consensus 137 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~ 216 (386)
T PRK09082 137 GRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHA 216 (386)
T ss_pred CEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCC
Confidence 888888864 67899999988899999999999999984 58889999999999999999986543321
Q ss_pred -----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc----ccHHHHHHH
Q 022194 186 -----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEK 256 (301)
Q Consensus 186 -----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~ 256 (301)
....+.+++++||||.+ |.+|+|.|++++++ .+.+.+...........+...+.++...+ +++.+.++.
T Consensus 217 s~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~iv~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 294 (386)
T PRK09082 217 SVLRHPELRERAFVVSSFGKTY-HVTGWKVGYCVAPA-ALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAF 294 (386)
T ss_pred ChhhCcCccCcEEEEeechhhc-cchhhhhhhhhCCH-HHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHH
Confidence 11134679999999999 56789999999874 56565555544334344444444333333 234555566
Q ss_pred HHHHHHHHHHHHHhC
Q 022194 257 QQDNAQKIAEFLASH 271 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (301)
+.++...+.+.|++.
T Consensus 295 ~~~~~~~~~~~L~~~ 309 (386)
T PRK09082 295 YQAKRDRFRAALANS 309 (386)
T ss_pred HHHHHHHHHHHHHhC
Confidence 778888888888763
No 106
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.6e-23 Score=187.99 Aligned_cols=252 Identities=17% Similarity=0.213 Sum_probs=173.5
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecch-HHHHH-
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSG-MAALA- 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~- 84 (301)
.+++|+.+..+++. +|.+...... ........|.+. |.+. ++++++++++.+|.+ +.+++++| ++|+.
T Consensus 34 ~~i~l~~g~p~~~~--~~~~~~~~~~---~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 34 SIVDLTVGEPDFDT--PDHIKQAAVA---AIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred CEEEcCCCCCCCCC--CHHHHHHHHH---HHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 56788744444442 2333222111 111123457766 7766 889999998887653 44666666 58886
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
++..++++||.|++++|.|..+... +...+..+..++.+ |++.+++.+.+++++|++++|+||||.+.+
T Consensus 109 ~~~~~~~~gd~vl~~~p~y~~y~~~----~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s 184 (402)
T PRK06107 109 ALMATLEAGDEVIIPAPYWVSYPDM----VLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYS 184 (402)
T ss_pred HHHHhcCCCCEEEEecCCCcCHHHH----HHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcC
Confidence 5566789999999999999888633 33344555555432 578899988888999999999999999985
Q ss_pred ---HHHHHHHHHHc-CCEEEEeCCcCCccccC----------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 158 ---IRKIAEMAHAH-GALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 158 ---l~~l~~l~~~~-~~~li~D~~~~~~~~~~----------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
+++|+++|+++ ++++|+||+|+...+.. +...+..++++||||.| +.+|+|.||+++++ .+.+.
T Consensus 185 ~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~~~~~-~~~~~ 262 (402)
T PRK06107 185 RAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTY-AMTGWRIGYAAGPA-DLIAA 262 (402)
T ss_pred HHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhh-cCcccceeeeecCH-HHHHH
Confidence 67788889998 99999999996432211 11124679999999999 66789999999875 56666
Q ss_pred HHHhhhhcCCCCCHHhHHHHHccc----ccHHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 224 LYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
+...........+...+.++...+ +.+.+.++.+.++.+.+.+.|++++++
T Consensus 263 ~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~ 317 (402)
T PRK06107 263 INKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGL 317 (402)
T ss_pred HHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 666665555555655555554443 235566677788888888999876443
No 107
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=2.5e-23 Score=185.81 Aligned_cols=221 Identities=17% Similarity=0.167 Sum_probs=160.7
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|.+. |.+. ++++.+++.+..|.. +.+++++| ++++. ++..++++||+|++++|.|..+. ..++..|+
T Consensus 61 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~ 136 (386)
T PRK07550 61 HLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHK----MWLDMLGI 136 (386)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhcCC
Confidence 456555 7776 788888888776642 55666666 58886 55567899999999999998886 45567889
Q ss_pred EEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+......
T Consensus 137 ~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~ 216 (386)
T PRK07550 137 RPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPH 216 (386)
T ss_pred EEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCc
Confidence 99888863 678899999888999999999999999976 7889999999999999999987432210
Q ss_pred -cc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc----HHHHHHH
Q 022194 186 -PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEK 256 (301)
Q Consensus 186 -~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~ 256 (301)
.. .....+++.||||.+ |.+|+|.|++++++ .+.+.+...........+...+.++...+.. ..+.++.
T Consensus 217 ~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~i~~~~-~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 294 (386)
T PRK07550 217 DLFADPDWDDTLVHLYSFSKSY-ALTGHRVGAVVASP-ARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAE 294 (386)
T ss_pred chhhCCCccccEEEEecchhhc-cCcccceEeeecCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHH
Confidence 11 123468899999999 55678999999875 4555555444444444444444444444433 2344566
Q ss_pred HHHHHHHHHHHHHhCCC
Q 022194 257 QQDNAQKIAEFLASHPR 273 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~ 273 (301)
+.++.+.+.+.|++++.
T Consensus 295 ~~~~~~~l~~~L~~~~~ 311 (386)
T PRK07550 295 IARRRDAFRAVFARLPG 311 (386)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 77778888888887644
No 108
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=1e-23 Score=189.45 Aligned_cols=250 Identities=20% Similarity=0.164 Sum_probs=171.8
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC--CC-chHHHHHHHHHhhcCCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GN-PTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~ 87 (301)
..+++|+ +|||+|+..+|.+.......-+... .....++. +. +...++++.++++++.+.+++++||++|+..++
T Consensus 45 ~~~~~~~-sn~ylgl~~~p~v~~a~~~~~~~~~-~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai 122 (406)
T PRK13393 45 REVTVWC-SNDYLGMGQHPAVLAAMHEALDTCG-AGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAAL 122 (406)
T ss_pred ccEEEee-cccccCCCCCHHHHHHHHHHHHHcC-CCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence 4689999 9999999999977765433211111 01111222 43 358999999999999999999999998875444
Q ss_pred h-ccC--CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC----CCceEEEEeCCCCCccccccHHH
Q 022194 88 H-LLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 88 ~-~~~--~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
. +.+ +||.|+.....|..+...+ ...+.+++.++..|.+++++.++ +++++|++++++|++|.+.|+++
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~ 198 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAE 198 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHH
Confidence 3 544 6776666555655554333 34566777777778888777664 36789999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCccccCc---------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh-
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA- 230 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~~~---------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~- 230 (301)
|.++|+++|+++|+||+|+.|.+... .....|++++|++|.++.+ +|+++++ +.+.+.+......
T Consensus 199 i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~----GG~~~~~-~~~~~~l~~~~~~~ 273 (406)
T PRK13393 199 ICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM----GGYITGS-AALCDFIRSFASGF 273 (406)
T ss_pred HHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc----CceeeCC-HHHHHHHHHhCcCc
Confidence 99999999999999999986554311 1122578889999999643 4777765 4555554443322
Q ss_pred -cCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 231 -EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 231 -~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.++..++++..+++.+ ...++++.++.+++.+.|++.
T Consensus 274 ~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (406)
T PRK13393 274 IFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA 318 (406)
T ss_pred eecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 23455665555555555443 233456677888889988764
No 109
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.92 E-value=1.5e-23 Score=188.57 Aligned_cols=221 Identities=15% Similarity=0.163 Sum_probs=147.7
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecchH-HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG~-~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
...|.+. |.+. ++++.+++.+..|.+ +.+++++|+ +++.++..++++||+|++++|+|+.+. ..++..|.
T Consensus 69 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~~~~~~gd~V~v~~P~Y~~~~----~~~~~~g~ 144 (409)
T PRK07590 69 FRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNILDIFGPDNTIAVTDPVYPVYV----DTNVMAGR 144 (409)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCC
Confidence 3456554 6665 777777776655432 567777775 888777778899999999999999997 44455565
Q ss_pred E-----------EEEecCCCHHHHHhhc-CCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc
Q 022194 120 V-----------VKRVNTCDLDEVASAI-GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS 184 (301)
Q Consensus 120 ~-----------~~~~~~~d~~~l~~~l-~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~ 184 (301)
+ ++.++.+..+.+...+ .+++++|++++|+||||.+.+ +++|+++|++||++||+||+|....+.
T Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~ 224 (409)
T PRK07590 145 TGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISD 224 (409)
T ss_pred cccccccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccC
Confidence 4 6677654211222112 257899999999999999976 677888999999999999999753321
Q ss_pred C----cc----C-CCCcEEEecccccccCCCCceeeEEEEcchhHHH-----------HHHHhhhhcCCCCCHHhHHHHH
Q 022194 185 R----PL----E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-----------ELYFLQNAEGSGLAPFDCWICL 244 (301)
Q Consensus 185 ~----~~----~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
. +. . .+..++++||||.+ |.+|+|.||++++++.+.. .............+...+.++.
T Consensus 225 ~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~ 303 (409)
T PRK07590 225 PSLPHSIYEIEGARECAIEFRSFSKTA-GFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAE 303 (409)
T ss_pred CCCCcchhhCCCcccceEEEecCcccc-CCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHH
Confidence 1 11 1 13468899999999 6678999999997654421 1111111111234444444433
Q ss_pred ccc-----ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 245 RGV-----KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 245 ~~l-----~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..+ +++.+.++.+.++++.+.+.|+.+
T Consensus 304 ~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 335 (409)
T PRK07590 304 AVYSPEGKAQIKELIDYYMENAKIIREGLESA 335 (409)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 322 234556677788888898999875
No 110
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3e-24 Score=189.99 Aligned_cols=243 Identities=18% Similarity=0.267 Sum_probs=167.8
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHHh
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVTH 88 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~~ 88 (301)
..++|+...+.+|. +|.+....... .. ...|.+ .....++++.++++++.+ +.+++++| ++++. ++..
T Consensus 30 ~~i~l~~n~~~~~~--~~~v~~a~~~~---~~--~~~~~p--~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 30 KIVKLASNENPYGP--SPKVKEAIAAH---LD--ELALYP--DGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred ceEEecCCCCCCCC--CHHHHHHHHHH---HH--HhhcCC--CCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHH
Confidence 57888844445663 44443332111 11 122222 223677888888888765 55666666 58886 4556
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l 164 (301)
++++||+|++++|.|+.+. ..+...|.++..++.+ |++++++.++++++++++++|+||||.+.+.++|.++
T Consensus 101 ~~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~ 176 (359)
T PRK03158 101 LLNPGTNTVMAEPTFSQYR----HNAIIEGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSF 176 (359)
T ss_pred HhCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 7899999999999999886 4445678888888764 7889998888899999999999999999999998888
Q ss_pred HHH--cCCEEEEeCCcCCccccC----c----cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCC
Q 022194 165 AHA--HGALLLVDNSIMSPVLSR----P----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (301)
Q Consensus 165 ~~~--~~~~li~D~~~~~~~~~~----~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
++. +|+++|+||+|....... . ...+.++++.||||.+ |.+|+|.||+++++ .+.+.+..... ...
T Consensus 177 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~v~~~-~~~~~~~~~~~--~~~ 252 (359)
T PRK03158 177 LESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAY-GLAALRVGYGIASE-ELIEKLNIARP--PFN 252 (359)
T ss_pred HHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhh-cCcchhhehhcCCH-HHHHHHHHhcC--CCC
Confidence 877 599999999997543321 1 1235689999999999 66789999999875 45555544433 234
Q ss_pred CCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 235 LAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+...+.++...++. +.+.++...++.+.+.+.|+++
T Consensus 253 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 292 (359)
T PRK03158 253 TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY 292 (359)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 555555555555443 3444455566667777777765
No 111
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.92 E-value=6.5e-24 Score=190.90 Aligned_cols=250 Identities=20% Similarity=0.159 Sum_probs=170.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccC--CC-CchHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR--SG-NPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g-~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
..+++|+ +|||+|+..+|.+.......-+... .....++ +| .+...++++.++++++.++.+++++|+++.. ++
T Consensus 46 ~~~~~~~-s~dylgl~~~p~v~~a~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai 123 (407)
T PRK09064 46 REVTVWC-SNDYLGMGQHPKVIEAMIEALDRCG-AGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATL 123 (407)
T ss_pred ceEEEEE-CCCCcCCCCCHHHHHHHHHHHHHcC-CCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHH
Confidence 5689999 9999999999987765432211110 1111122 23 3458999999999999888999999987764 44
Q ss_pred HhccC--CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC----CCceEEEEeCCCCCccccccHHH
Q 022194 87 THLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 87 ~~~~~--~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
..+.+ +++.|+.....|.+... .+...+.++..++..|++++++.++ +++++|++++++|++|.+.|+++
T Consensus 124 ~~l~~~~~~~~i~~~~~~h~s~~~----~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~ 199 (407)
T PRK09064 124 STLAKLIPDCVIFSDELNHASMIE----GIRRSRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAE 199 (407)
T ss_pred HHHhCCCCCCEEEEeCcchHHHHH----HHHHcCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHH
Confidence 44443 66655555444444332 2233456666677778888887775 46789999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCccccC---c------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh-
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLSR---P------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA- 230 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~~---~------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~- 230 (301)
|.++|+++|+++|+||+|+.|.+.. . .....|++++||||+|+. . +|++++++ .+.+.+......
T Consensus 200 i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~---GG~~~~~~-~~~~~l~~~~~~~ 274 (407)
T PRK09064 200 ICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGV-M---GGYIAGSA-ALVDAVRSYAPGF 274 (407)
T ss_pred HHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhc-c---CceEecCH-HHHHHHHHhCccc
Confidence 9999999999999999998554321 0 112358999999999953 3 47777764 455544333221
Q ss_pred -cCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 231 -EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 231 -~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
...+.++..+++++..++.+ ...++++.++.+++.+.|++.
T Consensus 275 ~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 275 IFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA 319 (407)
T ss_pred cccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 23445666666666665554 333577888888999999874
No 112
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.92 E-value=9.6e-24 Score=188.56 Aligned_cols=251 Identities=21% Similarity=0.183 Sum_probs=176.1
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCCCceEEecchHHHH-HHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKADRALCFTSGMAAL-AAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~ 87 (301)
..+++|+ +++++|..++|.+.......-.........|... |.+. +++++++++++++.++.+++++|++++ .++.
T Consensus 33 ~~~id~~-~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~ 111 (385)
T TIGR01825 33 KEVINLS-SNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLS 111 (385)
T ss_pred ceEEEee-ccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence 5789998 6888999888877755432211011111223333 5554 999999999999988889999998776 4667
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC----CCceEEEEeCCCCCccccccHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
.++++||.|++++|.|+.+... +...+.++..++..|++++++.++ +++++|++++++|++|.+.|+++|.+
T Consensus 112 ~~~~~gd~vi~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~ 187 (385)
T TIGR01825 112 ALLRKGDIVLSDELNHASIIDG----LRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVE 187 (385)
T ss_pred HhCCCCCEEEEEccccHHHHHH----HHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHH
Confidence 7899999999999999887533 334567777777678888887765 36889989999999999999999999
Q ss_pred HHHHcCCEEEEeCCcCCccccC---------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh--hcC
Q 022194 164 MAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 232 (301)
Q Consensus 164 l~~~~~~~li~D~~~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~--~~~ 232 (301)
+|++||+++|+||+|+.+.+.. ....+.|+++.|+||+++++ +|+++.++ .+.+.+..... ..+
T Consensus 188 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----gG~~~~~~-~~~~~~~~~~~~~~~~ 262 (385)
T TIGR01825 188 LAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV----GGYAAGHK-ELIEYLKNRARPFLFS 262 (385)
T ss_pred HHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC----CCEEecCH-HHHHHHHHhCcccccc
Confidence 9999999999999997654431 12246789999999999542 47777664 45554443322 122
Q ss_pred CCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 233 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 233 ~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
...++...+++..+++.+ .+..++..++.+++.+.|++.
T Consensus 263 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 304 (385)
T TIGR01825 263 TAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL 304 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 233444444444444332 345566777888888888764
No 113
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=1.1e-23 Score=184.47 Aligned_cols=232 Identities=19% Similarity=0.222 Sum_probs=164.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchH-HHHHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGM-AALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~-~ai~~~~ 87 (301)
..+++|++..+++|...++.. .. ...+|..+. .+|++.+++++|.. +.+++++|+ +++.++.
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~~-~~-------------~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~ 88 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVP-AD-------------AWRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP 88 (339)
T ss_pred hhhceeccCCCCCCCCCCCCC-HH-------------HHHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH
Confidence 467899877888887643321 10 122233444 89999999999884 577777775 8887667
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHH---HHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI---AEM 164 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l---~~l 164 (301)
.++++|+ |++++|+|..+. ..++..|.+++.++.++ +. +.+.++++++++|+||||.+.+.+++ ++.
T Consensus 89 ~~~~~g~-v~v~~P~y~~y~----~~~~~~g~~~~~v~~~~-~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~ 158 (339)
T PRK06959 89 ALLPRGR-VGIAPLAYSEYA----PAFARHGHRVVPLDEAA-DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQ 158 (339)
T ss_pred HhcCCCe-EEEcCCCcHHHH----HHHHHCCCEEEeecccc-hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 7788876 888999999986 55667889998888654 22 33456789999999999999875554 455
Q ss_pred HHHcCCEEEEeCCcCCccccC----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhH
Q 022194 165 AHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (301)
Q Consensus 165 ~~~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
|+++++++|+||+|....... .......+++.||||.| |.+|+|.||+++++ .+.+.+..... .+..+...+
T Consensus 159 ~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~-gl~GlRiGy~v~~~-~li~~l~~~~~--~~~vs~~~q 234 (339)
T PRK06959 159 LAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFF-GLAGVRAGFVLAAP-ALLAALRDALG--AWTVSGPAR 234 (339)
T ss_pred HHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhc-CCcchheEEEecCH-HHHHHHHHhcC--CCCCcHHHH
Confidence 668899999999998643211 11224469999999999 66789999999874 56665555443 333455555
Q ss_pred HHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 241 WICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 241 ~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.++...++. ..+.++++.++++++.+.|+++
T Consensus 235 ~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 268 (339)
T PRK06959 235 HAVRAAFADAAWQAAMRERLAADGARLAALLRAH 268 (339)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 555554433 3555677788888899999875
No 114
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.92 E-value=3.3e-23 Score=185.97 Aligned_cols=220 Identities=16% Similarity=0.152 Sum_probs=153.8
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCCC---c-eEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccC
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKAD---R-ALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~-~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
...|++. |.+. |+++.+++.+.++.+ + .+++++|+ +++. ++..++++||.|++++|+|+.+. ..++..
T Consensus 64 ~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~ 139 (403)
T PRK08636 64 THGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHS----QAFILA 139 (403)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHhc
Confidence 4567765 7766 888888888776632 3 57777775 8885 66778899999999999999986 556678
Q ss_pred CcEEEEecCC-------CHH----HHHhhcC---CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCC
Q 022194 118 GVVVKRVNTC-------DLD----EVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (301)
Q Consensus 118 g~~~~~~~~~-------d~~----~l~~~l~---~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~ 180 (301)
|.+++.++.+ |++ .++++++ .+++++++++|+||||.+.+ +++|+++|++|+++||+||+|..
T Consensus 140 g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~ 219 (403)
T PRK08636 140 GGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYAD 219 (403)
T ss_pred CCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchh
Confidence 8888887642 344 4556554 47899999999999999986 67799999999999999999875
Q ss_pred ccccC-------ccC--CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHH---HHc-cc
Q 022194 181 PVLSR-------PLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI---CLR-GV 247 (301)
Q Consensus 181 ~~~~~-------~~~--~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~l 247 (301)
..+.. ... ....++++||||.+ |.+|+|.||++.++ .+.+.+.........+.+...+.+ ++. ..
T Consensus 220 l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~iv~~~-~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~ 297 (403)
T PRK08636 220 ITFDGYKTPSILEVEGAKDVAVESYTLSKSY-NMAGWRVGFVVGNK-KLVGALKKIKSWLDYGMFTPIQVAATIALDGDQ 297 (403)
T ss_pred hccCCCCCCChhcCCCccccEEEEEeccccc-CCccceeeeeeCCH-HHHHHHHHHHHHhcccCChHHHHHHHHHHhCcH
Confidence 43221 011 12457789999999 56789999998765 455555554443222222222222 222 12
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 248 KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.+.++.+.++.+.+.+.|++.
T Consensus 298 ~~~~~~~~~~~~~~~~l~~~L~~~ 321 (403)
T PRK08636 298 SCVEEIRETYRKRRDVLIESFANA 321 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 234555666777778888888774
No 115
>PRK07337 aminotransferase; Validated
Probab=99.92 E-value=2.4e-23 Score=186.08 Aligned_cols=219 Identities=22% Similarity=0.223 Sum_probs=154.9
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|.+. |.+. ++++.+++.+.+|. +++++++++++++. ++..++++||+|++++|.|..+. ..++..|.
T Consensus 61 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~ 136 (388)
T PRK07337 61 TQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNR----HFVAAAEG 136 (388)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHcCC
Confidence 346554 5554 67777777766554 24444444468886 56667899999999999999886 33445677
Q ss_pred EEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
+++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|+++|+++++++|+||+|....+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 216 (388)
T PRK07337 137 RPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVS 216 (388)
T ss_pred EEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcC
Confidence 77777653 678999999889999999999999999875 7889999999999999999987443321
Q ss_pred ccCC-CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc-----ccHHHHHHHHHH
Q 022194 186 PLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMALRVEKQQD 259 (301)
Q Consensus 186 ~~~~-~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~ 259 (301)
.... ...+++.|+||.+ |.+|+|.||+++++ .+.+.+...........+...+.++...+ +.+.+.++.+.+
T Consensus 217 ~~~~~~~vi~~~S~SK~~-~~~G~RiG~~~~~~-~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 294 (388)
T PRK07337 217 ALSLGDDVITINSFSKYF-NMTGWRLGWLVVPE-ALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKR 294 (388)
T ss_pred hhhccCCEEEEEechhhc-CCchhheeeeecCH-HHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHH
Confidence 1112 2347899999999 56789999999875 45555555444433334444443433332 234555667777
Q ss_pred HHHHHHHHHHhC
Q 022194 260 NAQKIAEFLASH 271 (301)
Q Consensus 260 ~~~~l~~~l~~~ 271 (301)
+++.+.+.|+++
T Consensus 295 ~r~~~~~~L~~~ 306 (388)
T PRK07337 295 RRDFIVPALESL 306 (388)
T ss_pred HHHHHHHHHHhc
Confidence 888888888875
No 116
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.92 E-value=1.5e-23 Score=189.80 Aligned_cols=219 Identities=21% Similarity=0.238 Sum_probs=164.3
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|... |.+. ++++.+++....|.. +.|++|+|+ +|+. +...+++|||+|++.+|+|++.. .+++..|+
T Consensus 126 ~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~----~~~~~~g~ 201 (459)
T COG1167 126 LQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL----QALEALGA 201 (459)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHH----HHHHHcCC
Confidence 455653 7665 778888887555432 577777776 8886 55667889999999999999997 67788999
Q ss_pred EEEEecCC----CHHHHHhhcCC-CceEEEEe-CCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----
Q 022194 120 VVKRVNTC----DLDEVASAIGP-WTKLVWVE-SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----- 185 (301)
Q Consensus 120 ~~~~~~~~----d~~~l~~~l~~-~~~~v~i~-~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----- 185 (301)
++..++.+ |+|.+++.+++ ++++++++ +.+||||...+ -++|+++|++||++||+||.|+...+..
T Consensus 202 ~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~ 281 (459)
T COG1167 202 RVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPP 281 (459)
T ss_pred cEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCC
Confidence 99999987 89999999985 78988876 77899999987 4569999999999999999998654431
Q ss_pred ---ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHH---Hc-c--cccHHHHHHH
Q 022194 186 ---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC---LR-G--VKTMALRVEK 256 (301)
Q Consensus 186 ---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~--l~~~~~~~~~ 256 (301)
....+.+++++||||.+. ||+|.||+++++ .+.+.+...........+...+..+ +. + .+++...++.
T Consensus 282 l~~ld~~~rViy~gSFSK~l~--PglRlG~vv~p~-~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~ 358 (459)
T COG1167 282 LKALDAPGRVIYLGSFSKTLA--PGLRLGYVVAPP-ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRRE 358 (459)
T ss_pred hHhhCCCCCEEEEeeehhhcc--cccceeeeeCCH-HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 223478999999999994 579999999985 4555555555544444444442222 22 1 2345666677
Q ss_pred HHHHHHHHHHHHHhCC
Q 022194 257 QQDNAQKIAEFLASHP 272 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~ 272 (301)
+.++...+.+.|+++.
T Consensus 359 y~~rr~~l~~~L~~~~ 374 (459)
T COG1167 359 YARRRDALLEALAEYL 374 (459)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 7888888999998864
No 117
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=2.2e-23 Score=184.49 Aligned_cols=217 Identities=19% Similarity=0.187 Sum_probs=158.2
Q ss_pred CCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 53 GNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
+++...++++.+++++|.++++++++|++++. ++..++++||+|+++.+.|.+.. ..++..|++++.++.+
T Consensus 42 ~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~ 117 (361)
T cd06452 42 EKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSY----VAAERAGLNVREVPNTGHPE 117 (361)
T ss_pred cCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHH----HHHHhcCCEEEEEecCCCCC
Confidence 34678999999999999977777777788885 66678899999999999888775 3456778888888743
Q ss_pred ---CHHHHHhhcC-------CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEe
Q 022194 128 ---DLDEVASAIG-------PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMH 196 (301)
Q Consensus 128 ---d~~~l~~~l~-------~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~ 196 (301)
|+++++++++ +++++|++++|+||+|...++++|+++|+++|+++|+|++|+.+... .....++|++++
T Consensus 118 ~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~ 197 (361)
T cd06452 118 YHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVG 197 (361)
T ss_pred cccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEe
Confidence 6788888875 37899999999999999999999999999999999999999977643 344568999999
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHhhhh--------cCCCCCHHhHHHHHcccccHH---HHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------EGSGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIA 265 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~ 265 (301)
|+||++++|. ++|++++++ .+.+++...... .+.+......+.+..+++.+. ++..+..++++++.
T Consensus 198 s~~K~l~~~~--~~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~ 274 (361)
T cd06452 198 SGHKSMAASA--PIGVLATTE-EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFV 274 (361)
T ss_pred cCCccccCCC--CeEEEEECH-HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999996443 689998875 455544332211 111111112222233333222 23344445667899
Q ss_pred HHHHhCCCcce
Q 022194 266 EFLASHPRVKK 276 (301)
Q Consensus 266 ~~l~~~~~v~~ 276 (301)
+.|+++++++.
T Consensus 275 ~~L~~l~g~~v 285 (361)
T cd06452 275 AELEKIEGIKQ 285 (361)
T ss_pred HHHhcCCCeEE
Confidence 99998877643
No 118
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.1e-23 Score=185.80 Aligned_cols=212 Identities=17% Similarity=0.253 Sum_probs=158.0
Q ss_pred chHHHHHHHHHhhcCCC-ceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 55 PTRDALESLLAKLDKAD-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
+...++++.++++++.+ +.+++++|+ +++. ++..++++||+|++++|.|..+. ..++..|.+++.++.+
T Consensus 59 ~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 59 PTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYS----VYSKIAGAVEIPVKLKEDYT 134 (351)
T ss_pred ccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEeecCCCCC
Confidence 33678899999988875 567777775 7776 55667899999999999998765 4556778888888754
Q ss_pred -CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc----CccCCCCcEEEeccccc
Q 022194 128 -DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----RPLELGADIVMHSATKF 201 (301)
Q Consensus 128 -d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~di~~~S~sK~ 201 (301)
|+++++++++. ++++|++++|+||||.+.+.+++.+++++++.++|+||+|....-. ........++++||||.
T Consensus 135 ~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~ 214 (351)
T PRK14807 135 YDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKA 214 (351)
T ss_pred CCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHh
Confidence 67899998874 8999999999999999999999999999989999999999642111 01123568999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc--cHHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
+ |.+|+|.||++++ +.+.+.+..... ....+...+.++...++ .+.+..+.+.++++.+.+.|++.+++
T Consensus 215 ~-~~~GlRiG~~v~~-~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~ 285 (351)
T PRK14807 215 F-GLAGLRVGYAVAN-ENILKYLNLVKS--PYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGI 285 (351)
T ss_pred c-ccchhceeeeecC-HHHHHHHHHccC--CCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9 6788999999986 456565544332 23345555555544443 34555566777777888888776665
No 119
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=1.1e-23 Score=191.82 Aligned_cols=250 Identities=14% Similarity=0.181 Sum_probs=178.9
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCcccc--C--CCC-chHHHHHHHHHhhcCCCceEEecchHHHH-H
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYT--R--SGN-PTRDALESLLAKLDKADRALCFTSGMAAL-A 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~--~--~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~ 84 (301)
..++||+ +++|+|...+|.+.......-. ..+.+++ + +|. +...++++.|+++++.++.+++++|..++ .
T Consensus 109 ~~~id~~-s~~~lgl~~~~~i~ea~~~al~---~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~s 184 (481)
T PLN02822 109 KDVVNFA-SANYLGLIGNEKIKESCTSALE---KYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLSTIFS 184 (481)
T ss_pred ceEEEeE-CCCcCCCCCCHHHHHHHHHHHH---HhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHH
Confidence 4789999 8999999999988766433211 1122222 1 233 34899999999999998889988887555 5
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC---------CCc-eEEEEeCCCCCccc
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---------PWT-KLVWVESPTNPRQQ 154 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~---------~~~-~~v~i~~~~np~G~ 154 (301)
++.+++++||.|++....|..+. ..+...+.++++++.+|.++++..+. +++ ++|+++++++++|.
T Consensus 185 ai~a~~~~gd~Ii~d~~~H~s~~----~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~ 260 (481)
T PLN02822 185 VIPAFCKKGDIIVADEGVHWGIQ----NGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQ 260 (481)
T ss_pred HHHHhCCCCCEEEEeCCccHHHH----HHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCC
Confidence 77788999999998766554443 33444567888898887777665553 234 79999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCcCCccccCc----------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP----------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 155 ~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~----------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
+.|+++|+++|++||+++|+||+|+.+.++.. .....|++++||+|+++ .. +|++++++ .+.+.+
T Consensus 261 i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~~---GG~i~g~~-~ii~~~ 335 (481)
T PLN02822 261 IAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-TE---GGFCTGSA-RVVDHQ 335 (481)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-hC---CeEEEcCH-HHHHHH
Confidence 99999999999999999999999987665421 11256899999999995 33 48888765 455544
Q ss_pred HHhhhh--cCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhCCC
Q 022194 225 YFLQNA--EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 225 ~~~~~~--~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
...... ++..+++..+.+++.+++.+ .+.++++.++.+++++.|++.++
T Consensus 336 ~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g 389 (481)
T PLN02822 336 RLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPG 389 (481)
T ss_pred HhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 433322 22334465556655555443 45778899999999999987644
No 120
>PRK05839 hypothetical protein; Provisional
Probab=99.92 E-value=2.6e-23 Score=184.76 Aligned_cols=245 Identities=15% Similarity=0.112 Sum_probs=159.8
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC---CceEEecchH-HHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA---DRALCFTSGM-AALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~---~~~i~~~sG~-~ai~ 84 (301)
..+++|+.+.+.++. ++.+.... .. . . .....|.+. |.+. ++++.+++++.+|. ++.+++++|+ +++.
T Consensus 24 ~~~i~l~~~~p~~~~--~~~~~~a~-~~-~-~-~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~ 97 (374)
T PRK05839 24 YKGLDLTIGEPQFET--PKFIQDAL-KN-N-A-HLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF 97 (374)
T ss_pred CCeEEcCCCCCCCCC--CHHHHHHH-HH-H-h-hccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 378888854444553 23222221 11 1 0 123456655 6655 88888888888763 2567777775 7886
Q ss_pred HH-Hhcc--CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 85 AV-THLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 85 ~~-~~~~--~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
.+ ..++ ++||.|+++.|.|..+. ..+...|++++.++.+ +++..+..+ +++++|++++||||||.+.
T Consensus 98 ~~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~-~~~k~v~i~nP~NPTG~~~ 172 (374)
T PRK05839 98 NFPQFVLFDKQNPTIAYPNPFYQIYE----GAAIASRAKVLLMPLTKENDFTPSLNEKEL-QEVDLVILNSPNNPTGRTL 172 (374)
T ss_pred HHHHHHhcCCCCCEEEECCCCchhhH----HHHHhcCCEEEEeecccccCCcCCcchhhh-ccccEEEEeCCCCCcCccc
Confidence 44 4443 57899999999999986 5556788999998864 122222222 4689999999999999997
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCcccc----Cc---------cCCCCcEEEecccccccCCCCceeeEEEEcchhH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLS----RP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~----~~---------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~ 220 (301)
+ +++|+++|+++|++||+||+|...... .. ...+..+++.||||.| +.+|+|.||++++ +.+
T Consensus 173 s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~ii~~-~~~ 250 (374)
T PRK05839 173 SLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRS-SAPGLRSGFIAGD-ASI 250 (374)
T ss_pred CHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEecccccc-CCccceeEEEecC-HHH
Confidence 5 777888999999999999998743211 10 1224679999999999 5678999999986 456
Q ss_pred HHHHHHhhhhcCCCCCHHhHHHHHcc---cccHHHHHHHHHHHHHHHHHHH
Q 022194 221 AKELYFLQNAEGSGLAPFDCWICLRG---VKTMALRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~l~~~l 268 (301)
.+.+.......+...+...+.++... .+.+++.++.+.++.+.+.+.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 301 (374)
T PRK05839 251 LKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL 301 (374)
T ss_pred HHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc
Confidence 56555544433333343333333322 2334555666666666666655
No 121
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=5.7e-23 Score=184.38 Aligned_cols=221 Identities=19% Similarity=0.164 Sum_probs=151.7
Q ss_pred cccCC-CCch-HHHHHHHHHhhcC----CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDK----ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~----~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
.|.+. |.+. ++++.+.+....+ .++.++++++++++. ++..++.+||+|++++|.|..+. ..++..|.+
T Consensus 68 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~ 143 (403)
T TIGR01265 68 GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYD----TRAAFSGLE 143 (403)
T ss_pred CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCE
Confidence 45443 4433 5555555544322 234555555579986 55667799999999999998775 455677888
Q ss_pred EEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----
Q 022194 121 VKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----- 185 (301)
Q Consensus 121 ~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----- 185 (301)
++.++.+ |++.+++.+.++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|....+..
T Consensus 144 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~ 223 (403)
T TIGR01265 144 VRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP 223 (403)
T ss_pred EEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc
Confidence 8877642 688999988888999999999999999975 8889999999999999999997544321
Q ss_pred c---cCCCCcEEEecccccccCCCCceeeEEEEcc--hh----HHHHHHHhhhhcCCCCCHHhHHHHHccc-----ccHH
Q 022194 186 P---LELGADIVMHSATKFIAGHSDVMAGVLAVKG--ER----LAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMA 251 (301)
Q Consensus 186 ~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~ 251 (301)
. ......+++.||||.| +.+|+|.||+++.+ +. +.+.+..... .....+...+.++...+ ..+.
T Consensus 224 ~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~ 301 (403)
T TIGR01265 224 MASFASIVPVLSLGGISKRW-VVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFD 301 (403)
T ss_pred hhhhccCCcEEEEeeccccc-CCCcceEEEEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHH
Confidence 1 1112469999999998 45689999999853 22 2222222221 12233444444443333 2345
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCc
Q 022194 252 LRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 252 ~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
+.++++.+++..+.+.|+.++++
T Consensus 302 ~~~~~~~~~~~~l~~~L~~~~~~ 324 (403)
T TIGR01265 302 GKISVLKSNAELCYEELKDIPGL 324 (403)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCc
Confidence 66777888888899999877554
No 122
>PLN02231 alanine transaminase
Probab=99.92 E-value=4.6e-23 Score=189.33 Aligned_cols=226 Identities=17% Similarity=0.192 Sum_probs=156.8
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecch-HHHHHHH-Hhcc-CCCCeEEEcCCCCccHHHHHhhhcccC
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSG-MAALAAV-THLL-GTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~~~-~~~~-~~g~~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
...|++. |.+. |+.+.+++.+..|.+ +.|++++| ++++..+ ..++ .+||.|+++.|.|+.+. ..+...
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~----~~~~~~ 236 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYS----ASIALH 236 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHH----HHHHHc
Confidence 3457776 7766 888888888776532 45555555 5888754 4555 47999999999999997 555677
Q ss_pred CcEEEEecCC-------CHHHHHhhcCC------CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 118 GVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 118 g~~~~~~~~~-------d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
|.+++.++++ |++++++.++. +++++++++|+||||.+.+ +++|+++|+++|++||+||+|...
T Consensus 237 g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l 316 (534)
T PLN02231 237 GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQEN 316 (534)
T ss_pred CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhc
Confidence 7788887653 68889888753 6899999999999999975 788999999999999999999765
Q ss_pred cccC-----cc----------CC-CCcEEEecccccccCCCCceeeEEEEc--chhHHHHHHHhhhhcCCC--CCHHhHH
Q 022194 182 VLSR-----PL----------EL-GADIVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFLQNAEGSG--LAPFDCW 241 (301)
Q Consensus 182 ~~~~-----~~----------~~-~~di~~~S~sK~~~g~~g~~~g~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~ 241 (301)
.+.. .. .. ...+++.|+||.+.|.+|+|+||+++. ++.+.+.+........+. .+...+.
T Consensus 317 ~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~ 396 (534)
T PLN02231 317 VYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILAS 396 (534)
T ss_pred ccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHH
Confidence 4421 00 01 135889999998767789999999863 455666554443322211 1222222
Q ss_pred HHHccc----ccH-------HHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 242 ICLRGV----KTM-------ALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 242 ~~~~~l----~~~-------~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.++..- ..+ ...++.+.++++.+.+.|++++++.
T Consensus 397 ~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 397 LVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred HHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 233211 122 2235678888888999998876543
No 123
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=1.8e-23 Score=182.89 Aligned_cols=209 Identities=14% Similarity=0.164 Sum_probs=149.7
Q ss_pred CCCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 51 RSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 51 ~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
+|..+...+|++.+++.++.+ +.+++++|+ +++..+..++++| .|++.+|.|..+. ..++..|++++.++.+
T Consensus 36 ~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~~~~-~vv~~~P~y~~y~----~~~~~~G~~v~~vp~~~ 110 (332)
T PRK06425 36 IYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYINVG-NIIIVEPNFNEYK----GYAFTHGIRISALPFNL 110 (332)
T ss_pred cCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhCCC-cEEEeCCChHHHH----HHHHHcCCeEEEEeCCc
Confidence 444566899999999999876 567777775 8887665677776 4666799999886 6677889999999875
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-------ccCCCCcEE
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-------PLELGADIV 194 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-------~~~~~~di~ 194 (301)
|.+.++ ..++++|++++|+||||.+.+ +++|+++|+++++++|+||+|....... ....+..++
T Consensus 111 ~~~~~~~l~---~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~ 187 (332)
T PRK06425 111 INNNPEILN---NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVII 187 (332)
T ss_pred ccCcHHHHh---hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEE
Confidence 233332 247899999999999999976 6778888999999999999987543321 112356899
Q ss_pred EecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc-cc-cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG-VK-TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 195 ~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~-~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++||||.+ |.+|+|.||+++++ .+.+.+..... .+..+.....++... .+ .+++.++.+.++++.+.+.|+++
T Consensus 188 ~~SfSK~~-~l~GlRiGy~v~~~-~li~~l~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (332)
T PRK06425 188 GRSLTKIL-GIPSLRIGYIATDD-YNMKISRKITE--PWSVCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM 262 (332)
T ss_pred EeecHHhc-CCchhhheeeecCH-HHHHHHHHcCC--CCccCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999 66789999999875 45565544322 233344333332221 11 23455677778888899998875
No 124
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=1.4e-23 Score=185.46 Aligned_cols=247 Identities=16% Similarity=0.188 Sum_probs=166.6
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~~~~~ 88 (301)
...++|+...+++|+. |........ ... ....|.. +...++++.++++++.+ +.+++++|+ +++..+..
T Consensus 20 ~~~i~l~~~~~~~~~p--~~~~~a~~~--~~~--~~~~y~~---~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~ 90 (356)
T PRK08056 20 DQLLDFSANINPLGMP--VSLKRAIID--NLD--CAERYPD---VEYRHLHQALARHHQVPASWILAGNGETESIFAVVS 90 (356)
T ss_pred hhEEEeccccCCCCCC--HHHHHHHHH--HHH--hcccCcC---ccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHH
Confidence 4678888555666633 333332111 111 1112332 23688888888888765 556666664 88875555
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CH-HHHHhhcCCCceEEEEeCCCCCcccccc---HH
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL-DEVASAIGPWTKLVWVESPTNPRQQICD---IR 159 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~-~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~ 159 (301)
.+.+|+ +++..|.|..+. ..++..|.+++.++.+ ++ +++++.+.+++++|++++|+||||...+ ++
T Consensus 91 ~l~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~ 165 (356)
T PRK08056 91 GLKPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQ 165 (356)
T ss_pred HhCCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHH
Confidence 567776 677789998775 5567788898888753 22 3555666788999999999999999987 78
Q ss_pred HHHHHHHHcCCEEEEeCCcCCccccC------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCC
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~~------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
+|+++|+++++++|+||+|....... ......++++.|+||++ |.+|+|.||++++++.+.+.+.... ..+
T Consensus 166 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~v~~~~~~~~~l~~~~--~~~ 242 (356)
T PRK08056 166 AIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFY-AIPGLRLGYLVNSDDAAVARMRRQQ--MPW 242 (356)
T ss_pred HHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhc-cCcchhheeeecCCHHHHHHHHHhC--CCC
Confidence 89999999999999999986433221 11235789999999999 6678999999986555655554322 223
Q ss_pred CCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 234 GLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 234 ~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
..+...+.++...++ ...+.++.+.++++++.+.|++++++
T Consensus 243 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 286 (356)
T PRK08056 243 SINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLL 286 (356)
T ss_pred chhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 444444444444443 23445567778888888999877654
No 125
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=6e-23 Score=183.30 Aligned_cols=219 Identities=18% Similarity=0.219 Sum_probs=155.7
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
..|.+. |.+. ++++.+++.+.+|. +..+++++| ++|+. ++..++++||+|++++|.|..+. ..++..|
T Consensus 59 ~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g 134 (387)
T PRK07683 59 TSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYE----PIIRLCG 134 (387)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchH----HHHHHcC
Confidence 456544 6555 77777777665543 214555555 68886 55567899999999999999886 4445678
Q ss_pred cEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 119 VVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 119 ~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
.+++.++.+ |.+++++.+.++++++++++|+||||.+.+ +++|+++|+++|+++|+||+|....+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 214 (387)
T PRK07683 135 AKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTS 214 (387)
T ss_pred CEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCC
Confidence 888888764 567899988888999999999999999975 8889999999999999999998554321
Q ss_pred cc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc----ccHHHHHHHH
Q 022194 186 PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQ 257 (301)
Q Consensus 186 ~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~ 257 (301)
.. ..+.++++.|+||.+ |.+|+|.||+++++ .+.+.+...........+...+.++...+ .++.+.++.+
T Consensus 215 ~~~~~~~~~~vi~~~s~SK~~-~~pGlRiG~i~~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 292 (387)
T PRK07683 215 IAHFPEMREKTIVINGLSKSH-SMTGWRIGFLFAPS-YLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQY 292 (387)
T ss_pred hhhccCCcCCeEEEeeccccc-cCccceeEEEEcCH-HHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHH
Confidence 11 124579999999999 55689999999875 45555444333322233334443333333 2344556677
Q ss_pred HHHHHHHHHHHHhC
Q 022194 258 QDNAQKIAEFLASH 271 (301)
Q Consensus 258 ~~~~~~l~~~l~~~ 271 (301)
.++++.+.+.|++.
T Consensus 293 ~~~~~~~~~~l~~~ 306 (387)
T PRK07683 293 KKRRDYVYNRLISM 306 (387)
T ss_pred HHHHHHHHHHHHHc
Confidence 78888888888764
No 126
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=1.1e-22 Score=185.87 Aligned_cols=216 Identities=14% Similarity=0.174 Sum_probs=151.3
Q ss_pred ccCC-CCch-HHHHHHHHHhhcC----CC-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcc-cCC
Q 022194 49 YTRS-GNPT-RDALESLLAKLDK----AD-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTG 118 (301)
Q Consensus 49 y~~~-g~~~-~~~l~~~l~~~~~----~~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~-~~g 118 (301)
|..+ |.+. ++++.+++.+.+| .+ +.|++++| ++++. ++..+++|||.|++++|.|+.+.. .+. ..|
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~----~~~~~~G 165 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR----DLRWRTG 165 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH----HHHhhCC
Confidence 4444 6666 8888888887765 22 45666666 58886 667789999999999999999963 333 578
Q ss_pred cEEEEecCC-------CHHHHHhhc------CCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 119 VVVKRVNTC-------DLDEVASAI------GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l------~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
++++.++.+ |++.+++++ ..++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....
T Consensus 166 ~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 166 VEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 888888862 567776543 247899999999999999986 6778999999999999999998654
Q ss_pred ccC----c---c--C---C----CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc
Q 022194 183 LSR----P---L--E---L----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (301)
Q Consensus 183 ~~~----~---~--~---~----~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (301)
+.. + . + . ...+++.||||.| |.+|+|.|++++.++.+.+........ ...+...+.++...
T Consensus 246 f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~-glpGlRvG~li~~~~~l~~~~~~~~~~--~~vs~~~Q~a~~~~ 322 (496)
T PLN02376 246 FAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDM-GLPGFRVGIVYSFNDSVVSCARKMSSF--GLVSSQTQLMLASM 322 (496)
T ss_pred cCCCCcccHHHhhccccccccCCCeEEEEEeccccC-CCCcceEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHHHHHH
Confidence 321 0 0 0 0 1235689999999 667899999999767666654433322 22444444444333
Q ss_pred ccc-------HHHHHHHHHHHHHHHHHHHHhC
Q 022194 247 VKT-------MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 247 l~~-------~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.. +.+.++++.++.+.+.+.|++.
T Consensus 323 L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~ 354 (496)
T PLN02376 323 LSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA 354 (496)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 322 2334566677777788888764
No 127
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.92 E-value=3.5e-23 Score=185.83 Aligned_cols=216 Identities=21% Similarity=0.228 Sum_probs=157.5
Q ss_pred HHHHHHHHHhhcCC-C-ceEEecch-HHHHHHH-Hhc----cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKA-D-RALCFTSG-MAALAAV-THL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~-~-~~i~~~sG-~~ai~~~-~~~----~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.+++++.+++++|. + +.+++++| ++++.++ ..+ +++||+|+++++.|++....|...++..|++++.++.+
T Consensus 65 ~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 144 (401)
T PRK10874 65 YEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA 144 (401)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC
Confidence 67888999999998 3 45555555 6888644 443 47899999999999987666667778889999998753
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++.+++++++|++++++||||.+.|+++|+++|+++|+++++|++|+.+... +....++|+++.|+||++
T Consensus 145 ~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~ 224 (401)
T PRK10874 145 DRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLY 224 (401)
T ss_pred CCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEeccccc
Confidence 789999999999999999999999999999999999999999999999999876554 333457999999999976
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhh---------------------hhcCCCCCHHhHHHHHcccccH-----HHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQ---------------------NAEGSGLAPFDCWICLRGVKTM-----ALRVEK 256 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~ 256 (301)
||+|+ |+++.+++ +.+.+.... .....+.+.....++..+++.+ ....++
T Consensus 225 -gp~G~--G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~ 300 (401)
T PRK10874 225 -GPTGI--GVLYGKSE-LLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESW 300 (401)
T ss_pred -CCCcc--EEEEEchH-HHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 78874 88888754 333322111 0000122323333333444332 223455
Q ss_pred HHHHHHHHHHHHHhCCCcce
Q 022194 257 QQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v~~ 276 (301)
..+.++++.+.|++++++..
T Consensus 301 ~~~l~~~l~~~l~~~~g~~~ 320 (401)
T PRK10874 301 SRSLATLAEDALAKLPGFRS 320 (401)
T ss_pred HHHHHHHHHHHHhcCCCEEE
Confidence 56667788888888776643
No 128
>PRK08175 aminotransferase; Validated
Probab=99.92 E-value=4.5e-23 Score=184.62 Aligned_cols=220 Identities=17% Similarity=0.180 Sum_probs=157.0
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccC
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
...|++. |.+. ++++.+++.+.+|. ++.+++++|+ +++. ++..+++|||+|++++|.|..+. ..++..
T Consensus 60 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~ 135 (395)
T PRK08175 60 THGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHI----YGAVIA 135 (395)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHHc
Confidence 3557665 7766 88888888776553 2357677775 8885 55678899999999999999886 334567
Q ss_pred CcEEEEecCC----CHHHHHhhcC---CCceEEEEeCCCCCccccccH---HHHHHHHHHcCCEEEEeCCcCCccccC--
Q 022194 118 GVVVKRVNTC----DLDEVASAIG---PWTKLVWVESPTNPRQQICDI---RKIAEMAHAHGALLLVDNSIMSPVLSR-- 185 (301)
Q Consensus 118 g~~~~~~~~~----d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~l---~~l~~l~~~~~~~li~D~~~~~~~~~~-- 185 (301)
|.+++.++.+ ..++++++++ +++++|++++|+||||.+.+. ++|+++|+++|+++|+||+|....+..
T Consensus 136 g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~ 215 (395)
T PRK08175 136 GAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWK 215 (395)
T ss_pred CCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCC
Confidence 8888888764 3677887775 478999999999999999875 789999999999999999986433211
Q ss_pred --c----c-CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc----ccHHHHH
Q 022194 186 --P----L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRV 254 (301)
Q Consensus 186 --~----~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~ 254 (301)
. . ..+..+++.||||.| |.+|+|.||++.++ .+.+.+.........+.+...+.++...+ +++.+.+
T Consensus 216 ~~~~~~~~~~~~~~i~~~S~SK~~-g~pGlRiG~~~~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 293 (395)
T PRK08175 216 APSIMQVPGAKDVAVEFFTLSKSY-NMAGWRIGFMVGNP-ELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA 293 (395)
T ss_pred CcchhcCCCcccCEEEEeeccccc-cCcchhheeeeCCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHH
Confidence 1 1 123568899999999 56789999999764 56666655554333333333333222222 2345566
Q ss_pred HHHHHHHHHHHHHHHhC
Q 022194 255 EKQQDNAQKIAEFLASH 271 (301)
Q Consensus 255 ~~~~~~~~~l~~~l~~~ 271 (301)
+.+.++.+.+.+.|+++
T Consensus 294 ~~~~~~~~~~~~~L~~~ 310 (395)
T PRK08175 294 EQYKRRRDVLVKGLHEA 310 (395)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 77778888888888875
No 129
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=1.2e-23 Score=186.72 Aligned_cols=244 Identities=16% Similarity=0.234 Sum_probs=170.0
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~ 87 (301)
..+++|++..+++|. +|.+......... ....|. .+...++++.++++++.+ +.+++++|+ +++. ++.
T Consensus 32 ~~~i~l~~~~~~~~~--~~~~~~a~~~~~~----~~~~y~---~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 32 ADIIKLASNENPLGP--SPKAIEAIRAAAD----ELHRYP---DGSGFELKAALAEKFGVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CceEEecCCCCCCCC--CHHHHHHHHHHHH----hhcCCC---CCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 468999955467874 3433322111111 112233 223468889999998875 567777775 7776 456
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
.++++||+|++++|.|..+. ..+...|.+++.++.+ |++++++.+++++++|++++|+||||.+.+.++|.+
T Consensus 103 ~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 178 (367)
T PRK02731 103 AYLGPGDEVIYSEHGFAVYP----IAAQAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVER 178 (367)
T ss_pred HhcCCCCEEEEecCCHHHHH----HHHHHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHH
Confidence 67889999999999997765 3445688899888764 789999999888999999999999999999999999
Q ss_pred HHHHc--CCEEEEeCCcCCccccC--------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCC
Q 022194 164 MAHAH--GALLLVDNSIMSPVLSR--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (301)
Q Consensus 164 l~~~~--~~~li~D~~~~~~~~~~--------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
+++.. |+++|+||+|....... .......++++|+||.+ |.+|+|.||+++++ .+.+.+..... ..
T Consensus 179 l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~~~-~~~~~l~~~~~--~~ 254 (367)
T PRK02731 179 FLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAY-GLAGLRVGYGIAPP-EIIDALNRVRQ--PF 254 (367)
T ss_pred HHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhh-cCcccceeeeeCCH-HHHHHHHHccC--CC
Confidence 88875 89999999986543311 01224578999999999 66788999999875 45555544332 23
Q ss_pred CCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 234 GLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 234 ~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..+...+.++...++. +.+.++.+.++.+.+.+.|++.
T Consensus 255 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 295 (367)
T PRK02731 255 NVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL 295 (367)
T ss_pred CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3455555555554443 3455566667777788888775
No 130
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=9.1e-24 Score=187.46 Aligned_cols=216 Identities=16% Similarity=0.185 Sum_probs=155.1
Q ss_pred cccCCCCch-HHHHHHHHHhhcCCC---ceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEE
Q 022194 48 DYTRSGNPT-RDALESLLAKLDKAD---RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (301)
Q Consensus 48 ~y~~~g~~~-~~~l~~~l~~~~~~~---~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~ 121 (301)
.|...|.+. ++++.+++.+.+|.+ +.+++++|+ +++. ++..++++||.|+++.|.|+.+. ..++..|.++
T Consensus 61 ~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~ 136 (368)
T PRK03317 61 RYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHP----IIARGTHTEW 136 (368)
T ss_pred cCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHhcCCee
Confidence 454335443 666666666655532 567777775 8886 55667899999999999999886 4555777888
Q ss_pred EEecCC-----CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-c------cC
Q 022194 122 KRVNTC-----DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-P------LE 188 (301)
Q Consensus 122 ~~~~~~-----d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~------~~ 188 (301)
..++.+ |++++++++. .++++|++++|+||||.+.+.+++.++++..++++|+||+|+...... + ..
T Consensus 137 ~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~ 216 (368)
T PRK03317 137 VEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPE 216 (368)
T ss_pred EEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHh
Confidence 777643 7889998886 478899999999999999999999999999999999999997543211 1 11
Q ss_pred CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHH
Q 022194 189 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIA 265 (301)
Q Consensus 189 ~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~ 265 (301)
....+++.||||.+ |.+|+|.|++++++ .+.+.+.... ..+..++..+.++...++. +.+.++++.++.+.+.
T Consensus 217 ~~~~i~~~SfSK~~-g~~GlRiG~~~~~~-~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 292 (368)
T PRK03317 217 YPRLVVSRTMSKAF-AFAGGRLGYLAAAP-AVVDALRLVR--LPYHLSAVTQAAARAALRHADELLASVAALRAERDRVV 292 (368)
T ss_pred CCCEEEEEechhhh-ccchhhhhhhhCCH-HHHHHHHhcC--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 23468999999999 45679999999864 4555554433 2345566666665555543 3344556677777788
Q ss_pred HHHHhC
Q 022194 266 EFLASH 271 (301)
Q Consensus 266 ~~l~~~ 271 (301)
+.|+++
T Consensus 293 ~~L~~~ 298 (368)
T PRK03317 293 AWLREL 298 (368)
T ss_pred HHHHHC
Confidence 888765
No 131
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=1.1e-22 Score=182.65 Aligned_cols=222 Identities=17% Similarity=0.204 Sum_probs=146.9
Q ss_pred ccccCC-CCch-HHHHHHHHHhhc--CCC-ceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLD--KAD-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~--~~~-~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|+.. |.+. ++++.+++.... +.+ +.+++++|+ +++. ++..++++||+|++++|.|..+. ..++..|.
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~ 141 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWT----AAVSLSGG 141 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChH----HHHHHcCC
Confidence 446554 5444 566666654332 232 456666664 7775 66677899999999999999886 44445666
Q ss_pred EEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
.++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+..
T Consensus 142 ~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 221 (404)
T PRK09265 142 KPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI 221 (404)
T ss_pred EEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC
Confidence 66665432 678899998888999999999999999987 8889999999999999999987433221
Q ss_pred ----ccCCCCcEEEecccccccCCCCceeeEEEEc-chh----HHHHHHHhhhhcCCCCCHHhHHHHHcccc---cHHH-
Q 022194 186 ----PLELGADIVMHSATKFIAGHSDVMAGVLAVK-GER----LAKELYFLQNAEGSGLAPFDCWICLRGVK---TMAL- 252 (301)
Q Consensus 186 ----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~- 252 (301)
.......+++.||||.+ |.+|+|.||++.+ ++. +.+.+.... ......+...+.++...+. .+.+
T Consensus 222 ~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~ 299 (404)
T PRK09265 222 SIASLAPDLLCVTFNGLSKAY-RVAGFRVGWMVLSGPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSINEL 299 (404)
T ss_pred CHHHcCCCceEEEEecchhhc-cCcccceEEEEEeCchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhHHHH
Confidence 11112468899999999 5678999999974 332 223222221 1222334444444433332 2222
Q ss_pred --HHHHHHHHHHHHHHHHHhCCCc
Q 022194 253 --RVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 253 --~~~~~~~~~~~l~~~l~~~~~v 274 (301)
..+++.++++.+.+.|++++++
T Consensus 300 ~~~~~~~~~~r~~~~~~L~~~~~~ 323 (404)
T PRK09265 300 ILPGGRLYEQRDRAWELLNAIPGV 323 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCC
Confidence 2235666677788888776554
No 132
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.91 E-value=1.4e-23 Score=184.94 Aligned_cols=248 Identities=18% Similarity=0.268 Sum_probs=171.8
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~ 87 (301)
+..++|+.+++.++ .+|.+...... . .. ....|. .+...++++.++++++.+ +.+++++| ++++. ++.
T Consensus 19 ~~~i~l~~~~~~~~--~~~~~~~a~~~--~-~~-~~~~y~---~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~ 89 (346)
T TIGR01141 19 KEVIKLNSNENPFG--PPPKAKEALRA--E-AD-KLHRYP---DPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIR 89 (346)
T ss_pred CceEEccCCCCCCC--CCHHHHHHHHH--h-HH-HhhcCC---CCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHH
Confidence 57899984333344 45544443211 1 10 112233 333578889999998864 44555555 58875 556
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
.++++||+|++++|.|..+. ..++..|.+++.++.+ |++++++.+.+++++|++++|+||||.+.+++++.
T Consensus 90 ~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~ 165 (346)
T TIGR01141 90 AFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIE 165 (346)
T ss_pred HhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 67899999999999987664 4456678888888763 78999988888899999999999999999999999
Q ss_pred HHHHHc--CCEEEEeCCcCCcccc-Cc----cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCC
Q 022194 163 EMAHAH--GALLLVDNSIMSPVLS-RP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 235 (301)
Q Consensus 163 ~l~~~~--~~~li~D~~~~~~~~~-~~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
++++.+ ++++|+|++|+..... .. .....++++.|+||++ |.+|+|.|+++.++ .+.+.+..... ....
T Consensus 166 ~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~~-~~~~~~~~~~~--~~~~ 241 (346)
T TIGR01141 166 AVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAF-GLAGLRIGYAIANA-EIIDALNKVRA--PFNL 241 (346)
T ss_pred HHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhh-hchhhhceeeecCH-HHHHHHHhccC--CCCC
Confidence 988877 9999999998732221 11 1123568899999999 55688999999864 45555544332 2344
Q ss_pred CHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 236 APFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 236 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
++..+.++...++. +.+.++++.++++.+.+.|++++++.
T Consensus 242 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 284 (346)
T TIGR01141 242 SRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLE 284 (346)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 55555554444433 45566778888888999998876553
No 133
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.91 E-value=3.9e-24 Score=189.61 Aligned_cols=249 Identities=21% Similarity=0.238 Sum_probs=170.4
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCC--CCCCCCccccCCCCchHHHHHHHHHhhcC--------CCceEEecchH-
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPS--ATENGPYDYTRSGNPTRDALESLLAKLDK--------ADRALCFTSGM- 80 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~--~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--------~~~~i~~~sG~- 80 (301)
.+|+|+ +|++.+...+|...+....... ........|.+.. ...++++.++++++ .+..+++++|+
T Consensus 2 ~~I~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~--g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~ 78 (363)
T PF00155_consen 2 DVINLG-SNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQ--GYPELREAIADFLGRRYGVPVDPEANILVTSGAQ 78 (363)
T ss_dssp TEEESS-SSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTT--HHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHH
T ss_pred CEEEEE-CCCCCCcccccchHHHHHHHHHHhhcccccccCCCch--hhHHHHHHHHHHhhhccCcccccceEEEEecccc
Confidence 478999 7888666444444432211111 1112333454431 15566666666655 23378888887
Q ss_pred HHHHHHHh-c-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-------CCHHHHHhhcCC------CceEEEE
Q 022194 81 AALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGP------WTKLVWV 145 (301)
Q Consensus 81 ~ai~~~~~-~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~------~~~~v~i 145 (301)
+++..+.. + .++||+|++++|.|+.+. ..++..|.+++.++. .|++++++.+++ ++++|++
T Consensus 79 ~~~~~~~~~~~~~~~~~vlv~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~ 154 (363)
T PF00155_consen 79 AALFLLLRLLKINPGDTVLVPDPCYPSYI----EAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLI 154 (363)
T ss_dssp HHHHHHHHHHHSSTTSEEEEEESSSTHHH----HHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEE
T ss_pred cchhhhhhcccccccccceecCCcccccc----ccccccCceeeeccccccccccccccccccccccccccccccceeee
Confidence 55665544 4 569999999999999997 556677888888883 289999998876 5789999
Q ss_pred eCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccCc--------cCCC-CcEEEecccccccCCCCceeeEE
Q 022194 146 ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP--------LELG-ADIVMHSATKFIAGHSDVMAGVL 213 (301)
Q Consensus 146 ~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~~--------~~~~-~di~~~S~sK~~~g~~g~~~g~~ 213 (301)
++|+||||...+ +++|+++|+++|+++|+||+|........ ...+ ..+++.|+||.+ |.+|+|.|++
T Consensus 155 ~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRvG~i 233 (363)
T PF00155_consen 155 CNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF-GLPGLRVGYI 233 (363)
T ss_dssp ESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT-TSGGGTEEEE
T ss_pred cccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccc-cccccccccc
Confidence 999999999976 55566669999999999999987665532 1112 369999999999 6678999999
Q ss_pred EEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc-------ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 214 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-------KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+++ +.+.+.+......... +...+.++...+ +.+.+.++++.++++.+.+.|++.
T Consensus 234 ~~~-~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 295 (363)
T PF00155_consen 234 VAP-PELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI 295 (363)
T ss_dssp EEE-HHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cch-hhhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Confidence 995 5666766655554433 333333332222 145667788889999999999876
No 134
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=9.7e-24 Score=185.93 Aligned_cols=215 Identities=17% Similarity=0.200 Sum_probs=155.6
Q ss_pred CCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHH-HHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC
Q 022194 52 SGNPTRDALESLLAKLDKAD-RALCFTSGM-AALA-AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (301)
Q Consensus 52 ~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~ 127 (301)
|..+...++++++++.+|.+ +.+++++|+ +++. ++..++++| |+|+++.|.|..+. ..++..|.+++.++.+
T Consensus 54 Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v~~~ 129 (351)
T PRK01688 54 YPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTVPTL 129 (351)
T ss_pred CCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEeecC
Confidence 33445689999999999876 567777775 8886 555677887 89999999998875 5567788898888763
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCccccC-----ccCCCCcEEE
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLSR-----PLELGADIVM 195 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~--~~~~li~D~~~~~~~~~~-----~~~~~~di~~ 195 (301)
|++++++++ +++++|++++|+||||.+.+.++|.++++. .++++|+||+|....... .......+++
T Consensus 130 ~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~ 208 (351)
T PRK01688 130 DNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVIL 208 (351)
T ss_pred CCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEE
Confidence 678898887 588999999999999999987776666543 268999999987543211 1233568999
Q ss_pred ecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHHHHHHHHh
Q 022194 196 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 196 ~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
.||||+| |.+|+|.|++++++ .+.+.+..... .+..+...+.++...++ .+.+.++.+.++++++.+.|++
T Consensus 209 rSfSK~~-glaGlRiGy~i~~~-~~i~~l~~~~~--~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 284 (351)
T PRK01688 209 RTLSKAF-ALAGLRCGFTLANE-EVINLLLKVIA--PYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKE 284 (351)
T ss_pred ecchHhh-cCHHHHHhHHhCCH-HHHHHHHhccC--CCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 77899999999865 45555544332 23344433333333332 3455667777788889999988
Q ss_pred CCCcc
Q 022194 271 HPRVK 275 (301)
Q Consensus 271 ~~~v~ 275 (301)
++++.
T Consensus 285 ~~~~~ 289 (351)
T PRK01688 285 IPCVE 289 (351)
T ss_pred CCCCC
Confidence 76553
No 135
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=7.2e-23 Score=184.93 Aligned_cols=217 Identities=17% Similarity=0.206 Sum_probs=154.6
Q ss_pred ccCC-CCch-HHHHHHHHHhhcCC----C-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 49 YTRS-GNPT-RDALESLLAKLDKA----D-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 49 y~~~-g~~~-~~~l~~~l~~~~~~----~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
|+.. |.+. ++++.+.+.+.++. + +.+++++| ++++. ++..+++|||.|+++.|.|+.+...+ ....|+
T Consensus 91 y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~---~~~~g~ 167 (447)
T PLN02607 91 FQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL---RWRTGV 167 (447)
T ss_pred cCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH---HhcCCc
Confidence 4444 6665 88888888877652 2 45666666 58885 55667899999999999999986322 224677
Q ss_pred EEEEecCC-------CHHHHHhhcC------CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 120 VVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 120 ~~~~~~~~-------d~~~l~~~l~------~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
+++.++.+ |++.+++++. .+++++++++|+||||.+.+ +++|+++|+++++++|+||+|....+
T Consensus 168 ~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f 247 (447)
T PLN02607 168 KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVF 247 (447)
T ss_pred EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccccccc
Confidence 88877653 6788888775 37899999999999999986 78899999999999999999986544
Q ss_pred cCc-----c---------C-CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc
Q 022194 184 SRP-----L---------E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (301)
Q Consensus 184 ~~~-----~---------~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (301)
... . . ....+++.|+||.| |.+|+|.|++++.++.+...+....... ..+...+.++...+.
T Consensus 248 ~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~f-g~~GlRvG~ivs~n~~l~~~~~~~~~~~--~~s~~~q~~~~~~L~ 324 (447)
T PLN02607 248 SASEFVSVAEIVEARGYKGVAERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARRMSSFT--LVSSQTQHLLASMLS 324 (447)
T ss_pred CCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcC-CCCcceEEEEEEcCHHHHHHHHHHhhcC--CCCHHHHHHHHHHhC
Confidence 210 0 1 23568999999999 5678999999986666656554443221 223333333322222
Q ss_pred -------cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 249 -------TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 249 -------~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.++++.++.+.+.+.|+++
T Consensus 325 d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~ 354 (447)
T PLN02607 325 DEEFTENYIRTNRERLRKRYEMIVQGLRRA 354 (447)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 23455667777888888888875
No 136
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.91 E-value=5.9e-23 Score=184.28 Aligned_cols=220 Identities=15% Similarity=0.118 Sum_probs=150.3
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC---CceEE---ecchHHHHHHH----HhccCCCCeEEEcCCCCccHHHHHhhhc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA---DRALC---FTSGMAALAAV----THLLGTGEEIVAGDDLYGGTDRLLSRVT 114 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~---~~~i~---~~sG~~ai~~~----~~~~~~g~~Vlv~~~~y~~~~~~~~~~~ 114 (301)
..|++. |.+. |+++.+++.+..+. ++.++ +.+|++++.++ ..+++|||+|++++|+|+.+. ..+
T Consensus 66 ~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~----~~~ 141 (404)
T PTZ00376 66 KEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHV----NIF 141 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHH
Confidence 567766 7776 88888877655421 23344 44445776433 357899999999999999997 667
Q ss_pred ccCCcEEEEecC---C----CHHHHHhhcC---CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 115 PKTGVVVKRVNT---C----DLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 115 ~~~g~~~~~~~~---~----d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
+..|.+++.++. + |++.+++.++ ++++++++++||||||.+.+ +++|+++|++|++++|+||+|...
T Consensus 142 ~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~ 221 (404)
T PTZ00376 142 KSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGF 221 (404)
T ss_pred HHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCc
Confidence 788899988886 2 6888888884 34577788999999999975 777899999999999999999754
Q ss_pred cccC-----------ccCCCCcEEEecccccccCCCCceeeEEE--EcchhHHHHH----HHhhhhcCCCCCHHhHHHHH
Q 022194 182 VLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVLA--VKGERLAKEL----YFLQNAEGSGLAPFDCWICL 244 (301)
Q Consensus 182 ~~~~-----------~~~~~~di~~~S~sK~~~g~~g~~~g~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 244 (301)
.+.. .......++++||||.+ +.+|+|.||++ ..++.+.+.+ ...........+...+.++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~ 300 (404)
T PTZ00376 222 ASGDLDKDAYAIRLFAERGVEFLVAQSFSKNM-GLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIAD 300 (404)
T ss_pred cCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcc-cccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHH
Confidence 4321 11123579999999999 66789999984 3344433322 22222222233444444444
Q ss_pred ccccc----------HHHHHHHHHHHHHHHHHHHHhC
Q 022194 245 RGVKT----------MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 245 ~~l~~----------~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..++. +.+.++++.++++.+.+.|+++
T Consensus 301 ~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 301 RILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33332 2333456677788888888875
No 137
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.9e-22 Score=180.93 Aligned_cols=222 Identities=23% Similarity=0.289 Sum_probs=153.7
Q ss_pred ccccCC-CCch-HHHHHHHHHhh---cCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 47 YDYTRS-GNPT-RDALESLLAKL---DKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~---~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
..|.+. |.+. ++++.+++... ...++++++++|++++. ++..++++||+|++++|.|..+. ..++..|.+
T Consensus 60 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~ 135 (397)
T PRK07568 60 LAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYN----GFATSAGVK 135 (397)
T ss_pred cCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHH----HHHHHcCCE
Confidence 345544 5544 56666655421 12234555555578886 55667899999999999998875 445667888
Q ss_pred EEEecCC--------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc-----
Q 022194 121 VKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----- 184 (301)
Q Consensus 121 ~~~~~~~--------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~----- 184 (301)
++.++.+ +++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+.
T Consensus 136 ~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 215 (397)
T PRK07568 136 IVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYT 215 (397)
T ss_pred EEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCcc
Confidence 8887752 358898888888999999999999999975 788999999999999999999744321
Q ss_pred Ccc---C-CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc----ccHHHHHHH
Q 022194 185 RPL---E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEK 256 (301)
Q Consensus 185 ~~~---~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~ 256 (301)
... . ....+++.|+||.+ |.+|+|.|+++++++.+.+.+...... ....+...+.++...+ .++.+.++.
T Consensus 216 s~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 293 (397)
T PRK07568 216 SALSLEGLEDRVIIIDSVSKRY-SACGARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREE 293 (397)
T ss_pred ChhhcCCCcCCEEEEecchhhc-cCCCcceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHH
Confidence 111 1 24569999999999 556899999998766666554333222 2233333433333333 234556677
Q ss_pred HHHHHHHHHHHHHhCCCc
Q 022194 257 QQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v 274 (301)
+.++++.+.+.|++++++
T Consensus 294 ~~~~~~~l~~~L~~~~~~ 311 (397)
T PRK07568 294 YKKRRDILYEELNKIPGV 311 (397)
T ss_pred HHHHHHHHHHHHhcCCCc
Confidence 788888899999876544
No 138
>PRK08363 alanine aminotransferase; Validated
Probab=99.91 E-value=1.4e-22 Score=181.75 Aligned_cols=222 Identities=19% Similarity=0.166 Sum_probs=151.6
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC--C-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA--D-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~--~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
.|++. |.+. ++++.+++...+|. + +.+++++| ++++. ++..++++||.|++++|.|..+. ..++..|..
T Consensus 65 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~ 140 (398)
T PRK08363 65 YYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYT----GLVKFYGGV 140 (398)
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHHcCCE
Confidence 45433 5544 66666666655453 2 34555454 68886 55667899999999999999986 445566766
Q ss_pred EEEe-cC------CCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----
Q 022194 121 VKRV-NT------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----- 185 (301)
Q Consensus 121 ~~~~-~~------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----- 185 (301)
++.+ +. .|++++++.+.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+..
T Consensus 141 ~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~ 220 (398)
T PRK08363 141 PVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSP 220 (398)
T ss_pred EEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCH
Confidence 6666 22 2678899988888999999999999999986 8889999999999999999987533221
Q ss_pred --ccCCCCcEEEecccccccCCCCceeeEEEE-cchhHHHHHHHhhhh---cCCCCCHHhHHH---HHc-ccccHHHHHH
Q 022194 186 --PLELGADIVMHSATKFIAGHSDVMAGVLAV-KGERLAKELYFLQNA---EGSGLAPFDCWI---CLR-GVKTMALRVE 255 (301)
Q Consensus 186 --~~~~~~di~~~S~sK~~~g~~g~~~g~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~-~l~~~~~~~~ 255 (301)
.......+++.||||++ +.+|+|.||+++ .++.+.+.+...... .....+...+.+ ++. ..+.+.+.++
T Consensus 221 ~~~~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~ 299 (398)
T PRK08363 221 GSLTKDVPVIVMNGLSKVY-FATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMK 299 (398)
T ss_pred HHcCcCCcEEEEecchhcc-CCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHH
Confidence 11223578899999998 457899999998 334443333222111 112233333333 232 2234566677
Q ss_pred HHHHHHHHHHHHHHhCCCc
Q 022194 256 KQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~v 274 (301)
++.++.+.+.+.|++++++
T Consensus 300 ~~~~~~~~l~~~L~~~~~~ 318 (398)
T PRK08363 300 KLKERRDYIYKRLNEIPGI 318 (398)
T ss_pred HHHHHHHHHHHHHhcCCCC
Confidence 8888888899999887554
No 139
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=8.6e-24 Score=186.97 Aligned_cols=242 Identities=18% Similarity=0.260 Sum_probs=165.2
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHH-HHHh
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALA-AVTH 88 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~~ 88 (301)
..++|+...+++|+. |.+....... ... ...|...| ..++++.++++++.+ +.+++++|+ +++. ++..
T Consensus 30 ~~i~l~~nen~~~~~--~~v~~a~~~~--~~~--~~~Yp~~g---~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~ 100 (366)
T PRK01533 30 SFVKLASNENPFGCS--PRVLDELQKS--WLD--HALYPDGG---ATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRA 100 (366)
T ss_pred ceEEeCCCCCCCCCC--HHHHHHHHHH--HHh--cCcCCCCC---HHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH
Confidence 568888555666643 4333322111 111 11233223 466888888888765 567777775 8886 5566
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l 164 (301)
++++||+|++++|.|..+. ..+...|.+++.++.+ |+++++++++++++++++++|+||||.+.+.+++.++
T Consensus 101 l~~~gd~vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l 176 (366)
T PRK01533 101 VLKAGDNIVTAGATFPQYR----HHAIIEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQF 176 (366)
T ss_pred hcCCCCEEEEcCCcHHHHH----HHHHHcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999886 5556778999888864 7899999998889999999999999999886655555
Q ss_pred ---HHHcCCEEEEeCCcCCcccc--------CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCC
Q 022194 165 ---AHAHGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (301)
Q Consensus 165 ---~~~~~~~li~D~~~~~~~~~--------~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
|++++ ++|+||+|...... .....+..+++.||||.| |.+|+|.||++++ +.+.+.+.... ..+
T Consensus 177 ~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~l~GlRiG~~i~~-~~~~~~l~~~~--~~~ 251 (366)
T PRK01533 177 IEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAY-GLASFRVGYAVGH-EELIEKLNVVR--LPF 251 (366)
T ss_pred HHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHh-cChHHHHhHHhCC-HHHHHHHHHhc--CCC
Confidence 44544 67889998632221 111235689999999999 6678999999986 45666555443 235
Q ss_pred CCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 234 GLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 234 ~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..+...+.++...++. ..+.++...++.+++.+.++.+
T Consensus 252 ~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~ 292 (366)
T PRK01533 252 NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN 292 (366)
T ss_pred CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5667666666666543 3344455566666677777654
No 140
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.91 E-value=6e-23 Score=184.09 Aligned_cols=213 Identities=23% Similarity=0.326 Sum_probs=170.5
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHHHHHhccCCCCeEEEcCCCC---ccHHHHHhhhcccCCcEEEEecC---CC
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLY---GGTDRLLSRVTPKTGVVVKRVNT---CD 128 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y---~~~~~~~~~~~~~~g~~~~~~~~---~d 128 (301)
...+.+++.+++++|++.++++++|++|+.+++..+.+||+|++++..| ++..+. ...++..|+++++++. .+
T Consensus 122 ~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l~~GdeVIvs~~e~v~~ggs~~i-~~~~~~~G~~~~~v~~~~~~~ 200 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTLAKGKEVIVSRGELVEIGGSFRI-PDVMEQSGAKLVEVGTTNRTH 200 (454)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCcCEEEECCChhhhhcchhhH-HHHHHHcCCEEEEeCCCCCCC
Confidence 3478999999999999999999999999876667789999999998764 343333 3556778999999986 47
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCc--c--ccccHHHHHHHHHHcCCEEEEeCCcCC---------cc---ccCccCCCCc
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPR--Q--QICDIRKIAEMAHAHGALLLVDNSIMS---------PV---LSRPLELGAD 192 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~--G--~~~~l~~l~~l~~~~~~~li~D~~~~~---------~~---~~~~~~~~~d 192 (301)
++++++++++++++|++.+++|++ | ...|+++|+++||++|+++++|.+.+. +. ...+.+.|+|
T Consensus 201 l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaD 280 (454)
T TIGR00474 201 LKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVD 280 (454)
T ss_pred HHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCC
Confidence 899999999999999999999984 6 478999999999999999999986332 11 1245567999
Q ss_pred EEEecccccccCCCCceeeEEEEcchhH--------HHHHH-------HhhhhcCCCCCHHhHHHHHcccccHHHHHHHH
Q 022194 193 IVMHSATKFIAGHSDVMAGVLAVKGERL--------AKELY-------FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQ 257 (301)
Q Consensus 193 i~~~S~sK~~~g~~g~~~g~~~~~~~~~--------~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 257 (301)
++++|.+|+++|| ++|+++++++.+ .+.++ ......+..+.+..++..+.+++.+..+.+++
T Consensus 281 iv~fSg~K~LgGp---~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~ 357 (454)
T TIGR00474 281 LVTFSGDKLLGGP---QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEEL 357 (454)
T ss_pred EEEecCccccCCC---eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHH
Confidence 9999999999876 479999886544 22222 23344556677777888888899998899999
Q ss_pred HHHHHHHHHHHHhC
Q 022194 258 QDNAQKIAEFLASH 271 (301)
Q Consensus 258 ~~~~~~l~~~l~~~ 271 (301)
.++++.+.++|++.
T Consensus 358 ~~~A~~la~~L~~~ 371 (454)
T TIGR00474 358 RARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999874
No 141
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.91 E-value=6.1e-23 Score=182.11 Aligned_cols=211 Identities=16% Similarity=0.123 Sum_probs=154.3
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------ 127 (301)
+...++++.+++++|.++.+++++|++++. ++.+++++||+|+++.+.|.+.. ..++..|++++.++.+
T Consensus 51 ~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~----~~~~~~g~~~~~~~~~~~~~~~ 126 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSY----VAAERAGLNVKEVPHTGHPEYK 126 (370)
T ss_pred hHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHH----HHHHHcCCEEEEEecCCcccCC
Confidence 357788888999999998888888888885 66777899999999888887664 3456788899888864
Q ss_pred -CHHHHHhhcCC-------CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecc
Q 022194 128 -DLDEVASAIGP-------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 198 (301)
Q Consensus 128 -d~~~l~~~l~~-------~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~ 198 (301)
|++++++++++ ++++|++++|+||+|...|+++|+++|+++|+++|+|++|+.+..+ .....+.|++++|+
T Consensus 127 ~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~ 206 (370)
T TIGR02539 127 VDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSG 206 (370)
T ss_pred cCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeC
Confidence 89999998852 6789999999999999999999999999999999999999987544 33345789999999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHhhhhcC--------CCCCHHhHHHHHcccccHH---HHHHHHHHHHHHHHHH
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG--------SGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEF 267 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~~~ 267 (301)
||++++ ++ +.|++++++ .+.+.+......+. .+.......+...+++... ++..+..++.+++++.
T Consensus 207 sK~~~~-~g-~~G~l~~~~-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~ 283 (370)
T TIGR02539 207 HKSMAA-SG-PCGVLGMSE-EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAE 283 (370)
T ss_pred cccccC-CC-CEEEEEECH-HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999964 33 579998875 45554443322111 1111112222233333211 2233445556789999
Q ss_pred HHhCC
Q 022194 268 LASHP 272 (301)
Q Consensus 268 l~~~~ 272 (301)
|++..
T Consensus 284 L~~~g 288 (370)
T TIGR02539 284 LEDIG 288 (370)
T ss_pred HHhCC
Confidence 98763
No 142
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.91 E-value=1.6e-22 Score=179.18 Aligned_cols=213 Identities=22% Similarity=0.296 Sum_probs=153.4
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----CceEEecchH-HHHHHH-Hhc-cCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGM-AALAAV-THL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~-~ai~~~-~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
.|... |.+. ++++.+++.+.+|. ++.+++++|+ +++..+ ..+ +++||+|++++|.|..+. ..++..|
T Consensus 57 ~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~----~~~~~~g 132 (364)
T PRK07865 57 GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYE----VGARLAG 132 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHH----HHHHhcC
Confidence 56554 7655 88888888877553 2567777775 888654 445 689999999999999886 4556678
Q ss_pred cEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-------c--
Q 022194 119 VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-------P-- 186 (301)
Q Consensus 119 ~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-------~-- 186 (301)
+++..++ +.++++ ..++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+.. +
T Consensus 133 ~~~~~~~--~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 207 (364)
T PRK07865 133 ATVVRAD--SLTELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRV 207 (364)
T ss_pred CEEEecC--ChhhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccc
Confidence 8887775 444443 267899999999999999975 6789999999999999999987533221 0
Q ss_pred --cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc---HHHHHHHHHHHH
Q 022194 187 --LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNA 261 (301)
Q Consensus 187 --~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~ 261 (301)
......+++.||||.+ +.+|+|.||++++ +.+.+.+.......+...+...+.++...++. +.+.++.+.++.
T Consensus 208 ~~~~~~~~i~~~S~SK~~-~~~GlRiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 285 (364)
T PRK07865 208 CGGDHTGLLAVHSLSKQS-NLAGYRAGFVAGD-PALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRR 285 (364)
T ss_pred cCCccceEEEEeechhcc-CCCceeeEEEecC-HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 0123579999999999 5578999999876 45656565555444555555555555554443 445566777778
Q ss_pred HHHHHHHHhC
Q 022194 262 QKIAEFLASH 271 (301)
Q Consensus 262 ~~l~~~l~~~ 271 (301)
+.+.+.|+++
T Consensus 286 ~~l~~~L~~~ 295 (364)
T PRK07865 286 AVLRPALEAA 295 (364)
T ss_pred HHHHHHHHHc
Confidence 8888888774
No 143
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.8e-22 Score=180.02 Aligned_cols=210 Identities=20% Similarity=0.192 Sum_probs=149.5
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-------
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------- 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~------- 126 (301)
..+++++++++++.+ ++++++++++++. ++..++.+||+|++++|.|..+. ..++..|.+++.++.
T Consensus 68 ~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~ 143 (380)
T PRK06225 68 FPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID----NFASRFGAEVIEVPIYSEECNY 143 (380)
T ss_pred hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHHhCceEEeeccccccCCc
Confidence 677888888888765 4556666678886 55567889999999999998775 555677888887764
Q ss_pred -CCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----ccCCCCcEEEecc
Q 022194 127 -CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSA 198 (301)
Q Consensus 127 -~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~ 198 (301)
.|++.+++.+.+++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....... ......++++.||
T Consensus 144 ~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~ 223 (380)
T PRK06225 144 KLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSF 223 (380)
T ss_pred cCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeec
Confidence 1678999999888999999999999999864 8889999999999999999985321111 1122467899999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc---c-HHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---T-MALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~-~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
||++ |++|+|.|++++++ .+.+.+..... ...+.+...+.++...++ . +.+.++...++.+.+.+.|+++++
T Consensus 224 SK~~-g~~G~RiG~i~~~~-~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 299 (380)
T PRK06225 224 SKIF-GMAGLRIGAVVATP-DLIEVVKSIVI-NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEG 299 (380)
T ss_pred hhhc-CCccceeEEEecCH-HHHHHHHHHHh-cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999 77789999999875 45565544332 223334444333333322 2 233334445556667778877554
No 144
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=1.5e-22 Score=178.53 Aligned_cols=245 Identities=14% Similarity=0.237 Sum_probs=167.1
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHHHHHhc
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTHL 89 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~~~~~~ 89 (301)
.+++|+...+..+. +|.+......... ....|.. +...++++.++++++.+ +.+++++|+ +++..+...
T Consensus 20 ~~~~l~~~~~~~~~--p~~~~~a~~~~~~----~~~~Y~~---~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~ 90 (354)
T PRK06358 20 MILDFSANINPLGV--PESLKQAITENLD----KLVEYPD---PDYLELRKRIASFEQLDLENVILGNGATELIFNIVKV 90 (354)
T ss_pred ceEEecCCCCCCCC--CHHHHHHHHHHHH----hhhcCCC---ccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH
Confidence 46888854455554 3433332111111 1223432 33568888888888765 566666665 888765555
Q ss_pred cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HH
Q 022194 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IR 159 (301)
Q Consensus 90 ~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~ 159 (301)
+.+ +.|++++|.|+.+. ..++..|.+++.++.+ | +++++.+.++++++++++|+||||.+.+ ++
T Consensus 91 ~~~-~~v~i~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~ 164 (354)
T PRK06358 91 TKP-KKVLILAPTFAEYE----RALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMK 164 (354)
T ss_pred hCC-CcEEEecCChHHHH----HHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHH
Confidence 655 68999999999886 4556778888888753 3 4555566667999999999999999986 78
Q ss_pred HHHHHHHHcCCEEEEeCCcCCccccC--------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLSR--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 231 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~~--------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~ 231 (301)
+|+++|+++++++|+||+|....... .......+++.||||.+ |.+|+|.||++++++.+.+.+.....
T Consensus 165 ~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-gl~G~RiG~lv~~~~~~~~~~~~~~~-- 241 (354)
T PRK06358 165 KILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFF-AIPGLRLGYGLTSNKNLAEKLLQMRE-- 241 (354)
T ss_pred HHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhc-cCcchhheeeecCCHHHHHHHHHhCC--
Confidence 89999999999999999997543321 11234679999999999 66789999999876666665554433
Q ss_pred CCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 232 GSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
.+..+...+.++...++ .+.+.++.+.++++.+.+.|++++++
T Consensus 242 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 287 (354)
T PRK06358 242 PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGI 287 (354)
T ss_pred CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 34445555555544443 24556677788888899999887553
No 145
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=1.6e-23 Score=185.48 Aligned_cols=240 Identities=17% Similarity=0.232 Sum_probs=161.9
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEe-cchH-HHHH-HHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCF-TSGM-AALA-AVT 87 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~-~sG~-~ai~-~~~ 87 (301)
.+++|+.+.+++|. +|.+...... ... ....|. .+...++++.++++++.+ +.+++ ++|+ +++. ++.
T Consensus 35 ~~i~l~~~~~~~~~--~~~~~~~~~~--~~~--~~~~y~---~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~ 105 (361)
T PRK00950 35 SIIKLGSNENPLGP--SPKAVEAIEK--ELS--KIHRYP---EPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMR 105 (361)
T ss_pred ceEEccCCCCCCCC--CHHHHHHHHH--HHH--hhcCCC---CCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHH
Confidence 78999955567873 3444332111 100 111232 233588889999998875 34555 7786 6675 455
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
.++++||+|++++|.|..+. ..++..|.+++.++.+ |++++++.+.++++++++++|+||||.+.+.+++.
T Consensus 106 ~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~ 181 (361)
T PRK00950 106 TFIDPGDEVIIPTPTFSYYE----ISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIR 181 (361)
T ss_pred HhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHH
Confidence 56789999999999998775 4456778888888643 68899998888899999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCccccC----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHH
Q 022194 163 EMAHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 238 (301)
Q Consensus 163 ~l~~~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
++|+++|+++|+||+|....... ....+..++++||||.+ |.+|+|.|++++++ .+.+.+..... ....+..
T Consensus 182 ~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~~~~~-~~~~~~~~~~~--~~~~~~~ 257 (361)
T PRK00950 182 KILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVF-GLAGLRIGYGFVPE-WLIDYYMRAKT--PFSLTRL 257 (361)
T ss_pred HHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhh-cCchhhcchhcCCH-HHHHHHHHhcC--CCCCCHH
Confidence 99999999999999996432111 11224568999999999 56789999999875 45554444332 2334555
Q ss_pred hHHHHHccccc---HHHHHHHHHHHHHHHHHHH
Q 022194 239 DCWICLRGVKT---MALRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 239 ~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l 268 (301)
....+...+.. +.+..++..++++++.+.|
T Consensus 258 ~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l 290 (361)
T PRK00950 258 SQAAAIAALSDKEYIEKSIEHGIKSREYLYNEL 290 (361)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhc
Confidence 55554444443 3333344444444455444
No 146
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=1.2e-22 Score=180.85 Aligned_cols=218 Identities=23% Similarity=0.226 Sum_probs=160.8
Q ss_pred chHHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 55 PTRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
+..+++++.++++++.+ ++++++++++++. ++.+++++||+|+++.+.|+++...+...++..|.+++.++.+
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 34788999999999875 3445556678885 6666789999999999999888766666777778999888754
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccC
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (301)
|++++++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++++.|... +....++|++++|++|++++
T Consensus 124 ~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~ 203 (376)
T TIGR01977 124 LISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLG 203 (376)
T ss_pred CcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccC
Confidence 789999999889999999999999999999999999999999999999999988764 33456899999999999988
Q ss_pred CCCceeeEEEEcchhHHHHHHHhh----------------hhcCCCCCHHhHHHHHcccccH-----HHHHHHHHHHHHH
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQ----------------NAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQK 263 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~ 263 (301)
|.|. |+++.+++.....+.... .....+.+.....++..+++.+ +...++..+.+++
T Consensus 204 p~g~--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 204 PQGT--GGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred CCCc--eEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 8774 555555543211111000 0001122333333334444433 3445677788888
Q ss_pred HHHHHHhCCCc
Q 022194 264 IAEFLASHPRV 274 (301)
Q Consensus 264 l~~~l~~~~~v 274 (301)
+.+.|++.+++
T Consensus 282 ~~~~l~~~~~~ 292 (376)
T TIGR01977 282 LLNGLREINKV 292 (376)
T ss_pred HHHHHhcCCCe
Confidence 88888877654
No 147
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.9e-22 Score=168.97 Aligned_cols=230 Identities=20% Similarity=0.173 Sum_probs=170.1
Q ss_pred CCCCCCccccCC-CCch-HHHHHHHHHhhcC----CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhh
Q 022194 41 ATENGPYDYTRS-GNPT-RDALESLLAKLDK----ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRV 113 (301)
Q Consensus 41 ~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~----~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~ 113 (301)
.......+|++. |.+. |+++.+.+.+-.. ++++++++++++||. ++..+.+||..||++.|.|+-|. ..
T Consensus 91 l~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~----~~ 166 (447)
T KOG0259|consen 91 LRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYD----TR 166 (447)
T ss_pred HhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHH----Hh
Confidence 345566678887 7754 8888888766543 345555555579995 78888999999999999999885 67
Q ss_pred cccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 114 TPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 114 ~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
+...|+++++++.- |++.+|+.++++|.++++.+|+||+|.++. +++|++.|+++++++|.||+|+..++
T Consensus 167 a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vf 246 (447)
T KOG0259|consen 167 AIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVF 246 (447)
T ss_pred hhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeec
Confidence 78889999999853 899999999999999999999999999975 99999999999999999999987666
Q ss_pred cCc--------cCCCCcEEEecccccccCCCCceeeEEEEcchh--HHH--HHHHhhhhcCC--CCCHHhHHHH----Hc
Q 022194 184 SRP--------LELGADIVMHSATKFIAGHSDVMAGVLAVKGER--LAK--ELYFLQNAEGS--GLAPFDCWIC----LR 245 (301)
Q Consensus 184 ~~~--------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~--~~~--~~~~~~~~~~~--~~~~~~~~~~----~~ 245 (301)
++- ...-..+.++++||-+-- ||.|.||++..+.. +.. .+..+...... ......+.++ .+
T Consensus 247 g~~pfvpmg~fssiVPVitlggisKrW~V-PGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~k 325 (447)
T KOG0259|consen 247 GDKPFVPMGKFSSIVPVITLGGISKRWIV-PGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEK 325 (447)
T ss_pred CCCCccchhhccccCceEeeccccccccc-CCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHh
Confidence 421 112247899999998844 67899999987643 111 11233333222 2222333332 22
Q ss_pred cccc-HHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 246 GVKT-MALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 246 ~l~~-~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.-+. +......+..+++...+.|+++|.+.
T Consensus 326 Tp~efF~k~~~~lk~na~l~y~~Lk~IP~l~ 356 (447)
T KOG0259|consen 326 TPEEFFDKKLSFLKSNADLCYSRLKDIPCLT 356 (447)
T ss_pred ChHHHHHHHHHHHHhhHHHHHHHHhcCCCcc
Confidence 2222 45666778889999999999998865
No 148
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=1.1e-22 Score=178.03 Aligned_cols=230 Identities=17% Similarity=0.205 Sum_probs=162.8
Q ss_pred CCCCCCccccCeeecceeecCCCCCCCCccccCCCC-chHHHHHHHHHhhcCC--CceEEecchHHHHH-HHHhccCCCC
Q 022194 19 EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGN-PTRDALESLLAKLDKA--DRALCFTSGMAALA-AVTHLLGTGE 94 (301)
Q Consensus 19 ~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~-~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~-~~~~~~~~g~ 94 (301)
-|||+|++.+|.+.......-+ .|+ |. +..+++++.+++++|. +++++++||++|+. ++.+++++||
T Consensus 26 ~~~ylgl~~~~~~~~~~~~~~~-------~~~--g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 26 LYDLTGLAGGFKIDEEDLELLE-------TYV--GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred ccccccCCCChhHHHHHHHHHH-------Hhc--CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCC
Confidence 4899999999998876322111 121 44 4499999999999998 67888888889985 7777899999
Q ss_pred eEEEcC---CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccc---ccHHHHHHHHHHc
Q 022194 95 EIVAGD---DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI---CDIRKIAEMAHAH 168 (301)
Q Consensus 95 ~Vlv~~---~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~---~~l~~l~~l~~~~ 168 (301)
+|+++. |.|..+. ..++..|.++.. ..++++++. .+++++|+++. .+++|.+ .++++|+++|+++
T Consensus 97 ~Vli~~~d~p~~~s~~----~~~~l~ga~~~~--~~~l~~l~~--~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~ 167 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIP----RSCKLAGAEYFE--SDELSELKK--IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSK 167 (346)
T ss_pred EEEECCCCCCCchhHH----HHHHHcCCEEec--cCCHHHHhh--CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHc
Confidence 999753 5666654 445556666533 345666433 24678888865 5889998 5799999999999
Q ss_pred CCEEEEeCCcCCcccc---C--ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHH
Q 022194 169 GALLLVDNSIMSPVLS---R--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (301)
Q Consensus 169 ~~~li~D~~~~~~~~~---~--~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
|+++++||+|+.+... . ....+.|+++.|+||++.| .++|++++++ .+.+.+.........+.++..++++
T Consensus 168 ~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG---~r~G~v~~~~-~li~~l~~~~~~~~~s~~~~~~~aa 243 (346)
T TIGR03576 168 EAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDG---PRGGLLAGRK-ELVDKIKSVGEQFGLEAQAPLLAAV 243 (346)
T ss_pred CCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccc---cceEEEEeCH-HHHHHHHHhhcCcccCccHHHHHHH
Confidence 9999999999876532 1 1234578999999997643 4789999875 5666666655544444566666666
Q ss_pred HcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 244 LRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 244 ~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
..+++.. .+.++.+.++.+.+.+.++.
T Consensus 244 ~~aL~~~~~~~~~~~l~~r~~~~~~~l~~ 272 (346)
T TIGR03576 244 VRALEEFELSRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 6666543 34456666666666666654
No 149
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=3.7e-23 Score=182.84 Aligned_cols=249 Identities=18% Similarity=0.199 Sum_probs=170.5
Q ss_pred cceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchH-HHHH-H
Q 022194 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGM-AALA-A 85 (301)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~-~ai~-~ 85 (301)
...+++|+...++++ .+|.+...... .........|.. +...++++.++++++.+ +.+++++|+ +++. +
T Consensus 25 ~~~~i~l~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~Y~~---~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~ 97 (356)
T PRK04870 25 ATGMVKLDAMENPYR--LPAELRAELGE--RLAEVALNRYPD---PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLL 97 (356)
T ss_pred CCCceeCcCCCCCCC--CCHHHHHHHHH--HhhccccccCCC---CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHH
Confidence 456788875555555 33444333211 111111233443 23577888888888764 367777886 7776 4
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcC-CCceEEEEeCCCCCccccccHH
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG-PWTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~ 159 (301)
+..++++||+|++++|.|..+. ..++..|++++.++.+ |++++++.+. .++++|++++|+||||.+.+.+
T Consensus 98 ~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~ 173 (356)
T PRK04870 98 ALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDA 173 (356)
T ss_pred HHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHH
Confidence 4557799999999999999875 5667889999988764 6899999886 5899999999999999999988
Q ss_pred HHHHHHHHcCCEEEEeCCcCCcccc----CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCC
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 235 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
++.++++..++++|+||+|...... .....+..+++.|+|| + +.+|+|.|++++++ .+.+.+..... .+..
T Consensus 174 ~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~-~~~GlRiG~~i~~~-~~i~~~~~~~~--~~~~ 248 (356)
T PRK04870 174 DVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-L-GLAGLRLGYLAGHP-AWIAELDKVRP--PYNV 248 (356)
T ss_pred HHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-h-hhHHHhhhhhhCCH-HHHHHHHHccC--CCcC
Confidence 8888777768999999998643221 1122346799999999 6 67889999999875 45554444332 2334
Q ss_pred CHHhHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 236 APFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 236 ~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
+...+.++...+ +.+.+.++++.++++.+.+.|++++++
T Consensus 249 ~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 290 (356)
T PRK04870 249 NVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGV 290 (356)
T ss_pred CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 444444433333 334556677778888888888887665
No 150
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.91 E-value=1.5e-22 Score=180.88 Aligned_cols=252 Identities=23% Similarity=0.230 Sum_probs=173.5
Q ss_pred cceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccC-CCC-chHHHHHHHHHhhcCCCceEEecchHHHH-HHH
Q 022194 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR-SGN-PTRDALESLLAKLDKADRALCFTSGMAAL-AAV 86 (301)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~-~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~ 86 (301)
...+++|. +++++|..++|.+.......-.........+.. .|. +..+++++.++++++.++.+++++|++++ .++
T Consensus 38 g~~~id~~-~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l 116 (385)
T PRK05958 38 GRRMLNFA-SNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVL 116 (385)
T ss_pred CceEEEee-CCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHH
Confidence 36889999 677888866665554332211100000001111 133 44899999999999988889999998765 455
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC---CceEEEEeCCCCCccccccHHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~---~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
..++++||+|+++++.|+.+.. .+...|.+++.++..|++++++.+++ ++.+++++++.|++|...++++|++
T Consensus 117 ~~~~~~gd~V~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ 192 (385)
T PRK05958 117 TALAGKGDLIVSDKLNHASLID----GARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVA 192 (385)
T ss_pred HHhCCCCCEEEEeCccCHHHHH----HHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHH
Confidence 6778999999999999988763 34556788888888899999998864 3667777789999999999999999
Q ss_pred HHHHcCCEEEEeCCcCCccccC----------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh--hhc
Q 022194 164 MAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAE 231 (301)
Q Consensus 164 l~~~~~~~li~D~~~~~~~~~~----------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~--~~~ 231 (301)
+|+++|+++|+||+|+.+.+.. ......++++.|+||+++ ++ +|+++.+ +.+.+.+.... ...
T Consensus 193 ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~---Gg~~~~~-~~~~~~~~~~~~~~~~ 267 (385)
T PRK05958 193 LARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-SS---GAAVLGS-ETLIDYLINRARPFIF 267 (385)
T ss_pred HHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-cC---CcEEEcC-HHHHHHHHHhCcccee
Confidence 9999999999999997654321 111234689999999994 43 3777766 44555443222 112
Q ss_pred CCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 232 GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+...++....++..+++.+ .+..+++.++.+++.+.|++.
T Consensus 268 ~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 268 TTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL 310 (385)
T ss_pred cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 2334455544444444332 456677888888888888864
No 151
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-22 Score=180.67 Aligned_cols=207 Identities=18% Similarity=0.187 Sum_probs=152.6
Q ss_pred HHHHHHHHhhcCCC-ceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CH
Q 022194 58 DALESLLAKLDKAD-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL 129 (301)
Q Consensus 58 ~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~ 129 (301)
.++++.++++++.+ +.+++++|+ +++. ++..++++||+|++..|.|+.+. ..++..|++++.++.+ |+
T Consensus 74 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~ 149 (371)
T PRK05166 74 RALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHE----DYPTMMGARVERVTVTPDLGFDL 149 (371)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCeEEEeecCCCCCCCH
Confidence 47888888888865 567777775 8886 55667899999999999998875 5556788899888764 68
Q ss_pred HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCccccC--------ccC-CCCcEEEecc
Q 022194 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLSR--------PLE-LGADIVMHSA 198 (301)
Q Consensus 130 ~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~--~~~~li~D~~~~~~~~~~--------~~~-~~~di~~~S~ 198 (301)
+++++.+++++++|++++|+||||.+.+.+++.++++. .++++|+||+|....... ... ....+++.||
T Consensus 150 ~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~Sf 229 (371)
T PRK05166 150 DALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTF 229 (371)
T ss_pred HHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeec
Confidence 99999998888999999999999999987666666553 489999999987443211 011 2357999999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
||.| |.+|+|.||++.+++.+.+.+..... ....+...+.++...+ ..+++.++.+.++++.+.+.|+++
T Consensus 230 SK~~-~l~GlRiG~~i~~~~~l~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (371)
T PRK05166 230 SKAY-GLAGLRVGYGLVSDPELVGLLDRVRT--PFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM 302 (371)
T ss_pred hHhh-hcchhheeeeecCCHHHHHHHHHhcc--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999 66789999988766677666554432 2334555444443333 235555667777788888998876
No 152
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.91 E-value=1.8e-22 Score=181.04 Aligned_cols=215 Identities=19% Similarity=0.172 Sum_probs=155.6
Q ss_pred HHHHHHHHHhhcCCC--ceEEe-cchHHHHHHH-Hhc----cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKAD--RALCF-TSGMAALAAV-THL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~-~sG~~ai~~~-~~~----~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.+++++.+++++|.+ +.+++ +++++++..+ ..+ +++||+|+++++.|++....+...++..|++++.++.+
T Consensus 62 ~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 141 (398)
T TIGR03392 62 YELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA 141 (398)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC
Confidence 677889999999873 44554 4456888644 444 47899999999999986655666778889999998764
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++++++++++|++++++||||.+.|+++|+++|+++|+++++|++|+.+... +....++|++++|+||.+
T Consensus 142 ~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 221 (398)
T TIGR03392 142 DLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLY 221 (398)
T ss_pred CCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEeccccc
Confidence 789999999989999999999999999999999999999999999999999876554 233457899999999977
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhh---------------------hhcCCCCCHHhHHHHHccccc-----HHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQ---------------------NAEGSGLAPFDCWICLRGVKT-----MALRVEK 256 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~ 256 (301)
||+| .|+++.+++ +.+.+.... .....+.+......+..+++. +.+..++
T Consensus 222 -gp~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~ 297 (398)
T TIGR03392 222 -GPTG--IGVLYGKTE-LLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAW 297 (398)
T ss_pred -CCCc--eEEEEEcHH-HHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 7777 588887754 333332111 000112222233333333332 2334456
Q ss_pred HHHHHHHHHHHHHhCCCcc
Q 022194 257 QQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v~ 275 (301)
..+.++++.+.|++++++.
T Consensus 298 ~~~l~~~l~~~l~~l~g~~ 316 (398)
T TIGR03392 298 SVSLADLAEERLAQLPGFR 316 (398)
T ss_pred HHHHHHHHHHHHhcCCCeE
Confidence 6667778888888776654
No 153
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.91 E-value=1.9e-22 Score=180.63 Aligned_cols=220 Identities=17% Similarity=0.127 Sum_probs=150.2
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC---CceE--Eecch-HHHHHHHH---hccCCCCeEEEcCCCCccHHHHHhhhcc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA---DRAL--CFTSG-MAALAAVT---HLLGTGEEIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~---~~~i--~~~sG-~~ai~~~~---~~~~~g~~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
..|++. |.+. |+++.+++.+..+. ++.+ ++|+| ++++..+. ..++|||+|++++|.|+.+. ..++
T Consensus 63 ~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~----~~~~ 138 (396)
T PRK09257 63 KNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHR----AIFE 138 (396)
T ss_pred CCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHH----HHHH
Confidence 357766 7766 88888887765432 2333 66666 58886443 23589999999999999997 6667
Q ss_pred cCCcEEEEecC---C----CHHHHHhhcC---CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 116 KTGVVVKRVNT---C----DLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 116 ~~g~~~~~~~~---~----d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
..|.+++.++. + |++.+++.++ .+..++++++||||||.+.+ +++|+++|++||+++|+||+|....
T Consensus 139 ~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~ 218 (396)
T PRK09257 139 AAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFG 218 (396)
T ss_pred HcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccc
Confidence 78888888874 1 6788888875 33566677999999999975 7889999999999999999997544
Q ss_pred cc-C----c----c-CCCCcEEEecccccccCCCCceeeEEEE--cchh----HHHHHHHhhhhcCCCCCHHhHHHHHcc
Q 022194 183 LS-R----P----L-ELGADIVMHSATKFIAGHSDVMAGVLAV--KGER----LAKELYFLQNAEGSGLAPFDCWICLRG 246 (301)
Q Consensus 183 ~~-~----~----~-~~~~di~~~S~sK~~~g~~g~~~g~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (301)
.. . + . .....++++||||.+ +++|+|.||+++ .++. +...+...........+...+.++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 297 (396)
T PRK09257 219 DGLEEDAYGLRAFAAAGLELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATI 297 (396)
T ss_pred cchHHHHHHHHHHHhcCCcEEEEEEcCCcC-ccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHH
Confidence 31 0 0 1 123579999999999 777999999974 3322 222222222222233344443333322
Q ss_pred c----------ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 247 V----------KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 247 l----------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+ +++.+.++.+.++++.+.+.|+++
T Consensus 298 l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 298 LNDPELRAEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 223455677788888888888875
No 154
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-22 Score=179.13 Aligned_cols=216 Identities=20% Similarity=0.202 Sum_probs=153.1
Q ss_pred CCCchHHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC
Q 022194 52 SGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (301)
Q Consensus 52 ~g~~~~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~ 127 (301)
++.+...++++.++++++.+ +.+++++| ++++. ++..++.+| |.|++++|.|..+. ..++..|.+++.++.+
T Consensus 56 Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v~~~ 131 (364)
T PRK04781 56 YPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEVPLV 131 (364)
T ss_pred CCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEEecC
Confidence 33444678889999988875 46667666 58886 556677888 79999999987664 4456678888888752
Q ss_pred --------CHHHHHhhc-CCCceEEEEeCCCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCccccC-----ccCCCC
Q 022194 128 --------DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLSR-----PLELGA 191 (301)
Q Consensus 128 --------d~~~l~~~l-~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~--~~~~li~D~~~~~~~~~~-----~~~~~~ 191 (301)
|++++++.+ .+++++|++++|+||||.+.+.+++.++++. +++++|+||+|....... ......
T Consensus 132 ~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~ 211 (364)
T PRK04781 132 DGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDN 211 (364)
T ss_pred CCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCC
Confidence 456665444 5789999999999999999998887777764 479999999997543211 123356
Q ss_pred cEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHHHHH
Q 022194 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAE 266 (301)
Q Consensus 192 di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~ 266 (301)
.+++.||||+| |.+|+|.||+++++ .+.+.+...... +..+...+.++...+. ...+.++++.++++.+.+
T Consensus 212 vi~~~SfSK~~-gl~GlRvGy~v~~~-~l~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~ 287 (364)
T PRK04781 212 LAVLRTLSKAH-ALAAARIGSLIANA-ELIAVLRRCQAP--YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHA 287 (364)
T ss_pred EEEEecChhhc-ccccceeeeeeCCH-HHHHHHHhccCC--CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999 66789999999874 565655554432 3344443333333332 234555667778888999
Q ss_pred HHHhCCCcc
Q 022194 267 FLASHPRVK 275 (301)
Q Consensus 267 ~l~~~~~v~ 275 (301)
.|++++++.
T Consensus 288 ~L~~~~~~~ 296 (364)
T PRK04781 288 ALAQLPGVR 296 (364)
T ss_pred HHHhCCCCC
Confidence 998876653
No 155
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.90 E-value=2.2e-22 Score=180.60 Aligned_cols=218 Identities=16% Similarity=0.218 Sum_probs=141.2
Q ss_pred cccCC-CCch-HHHHHHHHHh-hcCCCceEEecch-HHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc----
Q 022194 48 DYTRS-GNPT-RDALESLLAK-LDKADRALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV---- 119 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~-~~~~~~~i~~~sG-~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~---- 119 (301)
.|.+. |.+. ++++.+++.+ .... +.+++++| ++++..+..++.+||+|++++|+|..+. ..++..|+
T Consensus 70 ~Y~p~~g~~~lr~aia~~~~~~~~~~-d~I~it~Ga~~al~~l~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~ 144 (402)
T TIGR03542 70 GYGPEQGYPFLREAIAENDYRGRIDP-EEIFISDGAKCDVFRLQSLFGSDNTVAVQDPVYPAYV----DSNVMAGRAGVL 144 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCH-HHEEECCCcHHHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCCcccc
Confidence 46544 5554 5555555422 1223 45666666 5888767777889999999999999986 44456666
Q ss_pred -------EEEEecCCCHHHHHhhc--CCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC--
Q 022194 120 -------VVKRVNTCDLDEVASAI--GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-- 185 (301)
Q Consensus 120 -------~~~~~~~~d~~~l~~~l--~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-- 185 (301)
+++.++.+..+.+...+ ..++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|.......
T Consensus 145 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~ 224 (402)
T TIGR03542 145 DDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSL 224 (402)
T ss_pred ccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCC
Confidence 77777754222121111 157899999999999999987 7889999999999999999997543221
Q ss_pred --c----c-CCCCcEEEecccccccCCCCceeeEEEEcchhH-------HHHHHHhhhhcCCCCCHHhHHHHHccc----
Q 022194 186 --P----L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-------AKELYFLQNAEGSGLAPFDCWICLRGV---- 247 (301)
Q Consensus 186 --~----~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l---- 247 (301)
+ . ..+..++++||||.+ |.+|+|.||++++++.+ .+.+.........+.+...+.++...+
T Consensus 225 ~~~~~~~~~~~~~vi~~~SfSK~~-g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 303 (402)
T TIGR03542 225 PHSIFEIPGAKECAIEFRSFSKTA-GFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEG 303 (402)
T ss_pred CcchhhCCCCcccEEEEecCcccc-CCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcc
Confidence 1 0 123568899999999 66789999999976533 121111111122234444443333322
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 248 -KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 248 -~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.+.++.+.++.+.+.+.|++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 304 LQPILEAISYYMENARILRKALEAA 328 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223445566677777888888774
No 156
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.90 E-value=2.5e-22 Score=180.48 Aligned_cols=215 Identities=18% Similarity=0.177 Sum_probs=158.1
Q ss_pred HHHHHHHHHhhcCC-C-ceEEecch-HHHHHHHH-h----ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKA-D-RALCFTSG-MAALAAVT-H----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~-~-~~i~~~sG-~~ai~~~~-~----~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.+++++.++++++. + +.+++++| ++++..+. . .+++||+|+++++.|++....|...++..|++++.++.+
T Consensus 69 ~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 148 (406)
T PRK09295 69 MENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP 148 (406)
T ss_pred HHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC
Confidence 67888999999986 3 45555555 68886443 2 568999999999999987766767778889999988753
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++++++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+... +....++|+++.|+||.+
T Consensus 149 ~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~ 228 (406)
T PRK09295 149 DGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLY 228 (406)
T ss_pred CCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhcc
Confidence 789999999889999999999999999999999999999999999999999888754 333568999999999966
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhh----------------------hhcCCCCCHHhHHHHHcccccH-----HHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQ----------------------NAEGSGLAPFDCWICLRGVKTM-----ALRVE 255 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~-----~~~~~ 255 (301)
||+| .|+++.+++.+ +.+.... .....+.+......+..+++.+ +...+
T Consensus 229 -gp~G--~G~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 304 (406)
T PRK09295 229 -GPTG--IGILYVKEALL-QEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAE 304 (406)
T ss_pred -CCCC--cEEEEEchHhH-hhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 7877 48888876532 3221100 0011133333344444444432 33445
Q ss_pred HHHHHHHHHHHHHHhCCCcc
Q 022194 256 KQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~v~ 275 (301)
+..+..+++.+.|+++++++
T Consensus 305 ~~~~l~~~l~~~l~~~~~~~ 324 (406)
T PRK09295 305 YEQNLMHYALSQLESVPDLT 324 (406)
T ss_pred HHHHHHHHHHHHHhcCCCEE
Confidence 56666777888887776653
No 157
>PRK09105 putative aminotransferase; Provisional
Probab=99.90 E-value=1.7e-22 Score=179.11 Aligned_cols=207 Identities=19% Similarity=0.240 Sum_probs=149.4
Q ss_pred chHHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 55 PTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
+...++++.+++.+|.+ +.|++++| ++++. ++..++++||+|++++|.|..+. ..++..|.+++.++.+
T Consensus 78 ~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~ 153 (370)
T PRK09105 78 ELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGW----RAADAQGAPVAKVPLRADGA 153 (370)
T ss_pred chHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEecCCCCCC
Confidence 33778888899888765 45666666 58886 55667899999999999999886 5566788998888763
Q ss_pred -CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCcccc-C----ccCCCCcEEEeccc
Q 022194 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLS-R----PLELGADIVMHSAT 199 (301)
Q Consensus 128 -d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~--~~~~li~D~~~~~~~~~-~----~~~~~~di~~~S~s 199 (301)
|++++++. .++++++++++|+||||.+.+.++|.++++. +++++|+||+|...... . .......+++.|||
T Consensus 154 ~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfS 232 (370)
T PRK09105 154 HDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFS 232 (370)
T ss_pred CCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEeccc
Confidence 67788776 4578999999999999999988887777653 48999999998532211 1 11224568999999
Q ss_pred ccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 200 K~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
|++ |.+|+|.||+++++ .+.+.+... ..+..+...+.++...+. .+.+.++.+.++.+++.+.|+++
T Consensus 233 K~~-g~~GlRiG~~v~~~-~~i~~l~~~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 233 KLY-GMAGMRLGLAAARP-DLLAKLARF---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred Hhh-cCCccceeeeecCH-HHHHHHHhc---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999 67889999999874 455544443 223344444444444333 34555667777888888888874
No 158
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.90 E-value=8.7e-22 Score=176.24 Aligned_cols=219 Identities=22% Similarity=0.251 Sum_probs=150.7
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcC----CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDK----ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~----~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..|... |.+. ++.+.+++...++ .++.++++++++++. ++..++++||.|++++|.|..+. ..++..|+
T Consensus 67 ~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~----~~~~~~g~ 142 (394)
T PRK06836 67 HGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYR----FYVDNHGG 142 (394)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHH----HHHHHcCC
Confidence 345443 5554 6666666665543 234445555568886 56667899999999999999986 55567889
Q ss_pred EEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHH------cCCEEEEeCCcCCcccc
Q 022194 120 VVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHA------HGALLLVDNSIMSPVLS 184 (301)
Q Consensus 120 ~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~------~~~~li~D~~~~~~~~~ 184 (301)
+++.++.+ |++++++++++++++|++++|+||||.+.+ +++|+++|++ ||+++|+||+|....+.
T Consensus 143 ~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~ 222 (394)
T PRK06836 143 KLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYD 222 (394)
T ss_pred EEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccC
Confidence 99888763 689999999889999999999999999986 6778888998 89999999999744322
Q ss_pred C------ccCCCCcEEEecccccccCCCCceeeEEEEcchhH-----HHHHHHhhhhcC-CCCCHHhHHHHHcccccHHH
Q 022194 185 R------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-----AKELYFLQNAEG-SGLAPFDCWICLRGVKTMAL 252 (301)
Q Consensus 185 ~------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 252 (301)
. ....+.++++.|+||.+ |.+|+|.|+++++++.. ...+.......+ ...+...+.++...+..- .
T Consensus 223 ~~~~~~~~~~~~~~i~~~S~SK~~-~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~ 300 (394)
T PRK06836 223 GAEVPYIFKYYDNSIVVYSFSKSL-SLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-V 300 (394)
T ss_pred CCCCCChHHccCcEEEEecchhhc-cCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-H
Confidence 1 11234689999999999 55689999999875431 111111111111 234444444544444332 2
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 022194 253 RVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~ 271 (301)
.++.+.++.+.+.+.|+++
T Consensus 301 ~~~~~~~~r~~l~~~L~~~ 319 (394)
T PRK06836 301 DVSIYKRNRDLLYDGLTEL 319 (394)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 3455667777788888775
No 159
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.90 E-value=1.1e-22 Score=180.42 Aligned_cols=251 Identities=19% Similarity=0.167 Sum_probs=162.8
Q ss_pred cceeeecCCCCCCCCccccCeeecceeecC-CCC-CC----CCccccCC--CC-chHHHHHHHHHhhcCCCceEEecchH
Q 022194 10 STLLMNFSNEFDPYGALSTPLYQTATFKQP-SAT-EN----GPYDYTRS--GN-PTRDALESLLAKLDKADRALCFTSGM 80 (301)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~-~~~-~~----~~~~y~~~--g~-~~~~~l~~~l~~~~~~~~~i~~~sG~ 80 (301)
+..+++|+ +|||||...+|.+.......- ... +. .+..-++. |. +..+++++.++++++.++++++++|+
T Consensus 3 ~~~~~~~~-s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~ 81 (370)
T PRK05937 3 ESLSIDFV-TNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGY 81 (370)
T ss_pred CCceEEeE-CCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChH
Confidence 45689999 999999999998886543321 110 10 11111221 33 34899999999999999899999999
Q ss_pred HHHHHHH-hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEEEEeCCCCCcc
Q 022194 81 AALAAVT-HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVWVESPTNPRQ 153 (301)
Q Consensus 81 ~ai~~~~-~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v~i~~~~np~G 153 (301)
.++..+. .+.+++|.|++....|.+....+.. .. +.. ..++..|++++++.++ +++.+|++++++|++|
T Consensus 82 ~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~--~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G 157 (370)
T PRK05937 82 MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-IS--GWH-QSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKG 157 (370)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cC--Cce-EEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCC
Confidence 7765444 3456777777766677666654432 22 333 3356678888888886 2456778899999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCCcCCccccCcc-----CCC---CcEEEecccccccCCCCceeeEEEEcchhHHHHHH
Q 022194 154 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL-----ELG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (301)
Q Consensus 154 ~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~-----~~~---~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~ 225 (301)
.+.|+++|.++|+++|+++++|++|+.|.++... ..+ .++++.|+||.+ |+.| ++ ++..++ ....+.
T Consensus 158 ~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G--~~-vl~~~~-~~~~~~ 232 (370)
T PRK05937 158 TLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMG--AA-LLSSSE-VKQDLM 232 (370)
T ss_pred CccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCc--eE-EEcCHH-HHHHHH
Confidence 9999999999999999999999999987654321 122 247789999999 5544 24 444433 323222
Q ss_pred Hh--hhhcCCCCCHHhHHHHHcccccH----HHHHHHHHHHHHHHHHHHHh
Q 022194 226 FL--QNAEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 226 ~~--~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~ 270 (301)
.. ......+.++....++..+++.+ ...++++.++.+++.+.|..
T Consensus 233 ~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~ 283 (370)
T PRK05937 233 LNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS 283 (370)
T ss_pred HhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC
Confidence 11 11223345555555544555443 22345556666666666653
No 160
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=2.2e-22 Score=178.49 Aligned_cols=207 Identities=20% Similarity=0.201 Sum_probs=149.6
Q ss_pred HHHHHHHHHhhcCCC-ceEEecchH-HHHHH-HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CH
Q 022194 57 RDALESLLAKLDKAD-RALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DL 129 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~~-~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~ 129 (301)
..++++.++++++.+ +.+++++|+ +++.. +..++++||.|++++|.|+.+. ..+...|.+++.++.+ |+
T Consensus 69 ~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~vp~~~~~~~~ 144 (369)
T PRK08153 69 NHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFN----YHVAGFGGRLVTVPYRDDREDL 144 (369)
T ss_pred cHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHH----HHHHHcCCeEEEeeCCCCCCCH
Confidence 578888899888865 577777775 78864 4556899999999999999886 3344567788877753 67
Q ss_pred HHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc--CCEEEEeCCcCCccccC---c--cCCCCcEEEeccccc
Q 022194 130 DEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLSR---P--LELGADIVMHSATKF 201 (301)
Q Consensus 130 ~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~--~~~li~D~~~~~~~~~~---~--~~~~~di~~~S~sK~ 201 (301)
+++++.+. .+++++++++|+||||.+.+.+++.++++.. +++||+||+|....... . ......+++.||||.
T Consensus 145 ~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 224 (369)
T PRK08153 145 DALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKA 224 (369)
T ss_pred HHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHh
Confidence 77776654 6789999999999999999877776666543 89999999987443221 1 112356999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+ |.+|+|.||+++++ .+.+.+..... ....++..+.++...++. +.+.++...++.+.+.+.|++.
T Consensus 225 ~-g~~GlRiG~~v~~~-~~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~ 293 (369)
T PRK08153 225 Y-GLAGARVGYAIGAP-GTIKAFDKVRN--HFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN 293 (369)
T ss_pred c-cCcchheeeeecCH-HHHHHHHHhhc--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9 66789999999874 45555544443 244566666665555543 3445566667777777777764
No 161
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=2.1e-22 Score=177.76 Aligned_cols=217 Identities=18% Similarity=0.193 Sum_probs=154.2
Q ss_pred hHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCC---------------eEEEcCCCCccHHHHHhhhcccCCc
Q 022194 56 TRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGE---------------EIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~---------------~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
.++++++.+++++|.++++++++||+|+. ++.+++++|| +|+++.|.|..+...+...+...|.
T Consensus 46 ~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~ 125 (363)
T TIGR01437 46 LVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGG 125 (363)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCC
Confidence 38999999999999998888888999985 7777888888 8999887666542122355567788
Q ss_pred EEEEecCC---CHHHHHhhcCCCceEEE-EeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEE
Q 022194 120 VVKRVNTC---DLDEVASAIGPWTKLVW-VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVM 195 (301)
Q Consensus 120 ~~~~~~~~---d~~~l~~~l~~~~~~v~-i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~ 195 (301)
++++++.+ |++++++++.+++++++ +++++|++|.+.|+++|+++||++|+++|+|++|+... ......|+|+++
T Consensus 126 ~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~D~~~ 204 (363)
T TIGR01437 126 KVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGADLVI 204 (363)
T ss_pred eEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCCCEEE
Confidence 88888753 89999999999898766 67889999999999999999999999999999998322 122345789999
Q ss_pred ecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCC--CCH---HhHHHHHccc-ccHHHHHHHHHHHHHHHHHHHH
Q 022194 196 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--LAP---FDCWICLRGV-KTMALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 196 ~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~l-~~~~~~~~~~~~~~~~l~~~l~ 269 (301)
+|+||++.|| ++|+++.+++ +.+.........+.. ... ....+++..+ +.-.+..++..+++..+.+.|+
T Consensus 205 ~S~~K~l~gp---~~G~l~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~ 280 (363)
T TIGR01437 205 YSGAKAIEGP---TSGLVLGKKK-YIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALN 280 (363)
T ss_pred EeCCcccCCC---ceEEEEEcHH-HHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHh
Confidence 9999999776 4788887644 444433322211111 111 1111112111 1122334455566778999999
Q ss_pred hCCCcceE
Q 022194 270 SHPRVKKV 277 (301)
Q Consensus 270 ~~~~v~~v 277 (301)
+.+++...
T Consensus 281 ~i~g~~~~ 288 (363)
T TIGR01437 281 TLKGVSAS 288 (363)
T ss_pred cCCCeEEE
Confidence 88877544
No 162
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=9.8e-23 Score=179.85 Aligned_cols=211 Identities=15% Similarity=0.160 Sum_probs=151.9
Q ss_pred CchHHHHHHHHHhhcCCC-ceEEecchH-HHHH-HHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 54 NPTRDALESLLAKLDKAD-RALCFTSGM-AALA-AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+...+|++.+++++|.+ +.+++++|+ +++. ++..++++| |+|++++|.|..+. ..++..|++++.++.+
T Consensus 59 ~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v~~~~~ 134 (354)
T PRK04635 59 ECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKALPLTAD 134 (354)
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEEecCCC
Confidence 334688899999998876 567677765 8886 555677888 89999999998875 5567788999888864
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc-CCEEEEeCCcCCccccC-----ccCCCCcEEEecc
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLSR-----PLELGADIVMHSA 198 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~-~~~li~D~~~~~~~~~~-----~~~~~~di~~~S~ 198 (301)
|++.++ .+ +++++|++++|+||||.+.+.+++.++++.. ++++|+||+|....... .......+++.||
T Consensus 135 ~~~~~~~l~-~~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~ 212 (354)
T PRK04635 135 YQLPLDYIE-QL-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTL 212 (354)
T ss_pred CCCCHHHHH-hc-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEech
Confidence 566666 34 5899999999999999999999988888763 69999999986433211 1122456899999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc-----ccHHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
||++ |.+|+|.|++++++ .+.+.+..... ....+.....++...+ +.+.+.++.+.++++.+.+.|++++.
T Consensus 213 SK~~-~l~GlRlG~~i~~~-~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 288 (354)
T PRK04635 213 SKAF-ALAGARCGFTLANE-ELIEILMRVIA--PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGG 288 (354)
T ss_pred HHHh-hhhHHHHhhhhCCH-HHHHHHHhhcC--CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999 67789999999875 45555443322 2333433333333333 23445556777778889999988764
Q ss_pred c
Q 022194 274 V 274 (301)
Q Consensus 274 v 274 (301)
+
T Consensus 289 ~ 289 (354)
T PRK04635 289 A 289 (354)
T ss_pred c
Confidence 4
No 163
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4.3e-22 Score=175.86 Aligned_cols=205 Identities=14% Similarity=0.108 Sum_probs=149.5
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----C
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----D 128 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d 128 (301)
..++++.++++++.+ +.+++++| ++++. ++..++++||+|++++|.|..+. ..++..|++++.++.+ |
T Consensus 62 ~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d 137 (353)
T PRK05387 62 ADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYP----VYAGLYGIPYEEIPLDDDFSID 137 (353)
T ss_pred HHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHH----HHHHHcCCEEEEeecCCCCCCC
Confidence 468888888888765 45666666 58886 56667899999999999997775 4456778888888764 5
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc-CCEEEEeCCcCCccccC----ccCCCCcEEEeccccccc
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIA 203 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~-~~~li~D~~~~~~~~~~----~~~~~~di~~~S~sK~~~ 203 (301)
+++++ +..++|++++|+||||.+.+.+++.++++.+ ++++|+||+|....... ......+++++||||.+
T Consensus 138 ~~~l~----~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~- 212 (353)
T PRK05387 138 VEDYL----RPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSR- 212 (353)
T ss_pred HHHHH----hcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhh-
Confidence 66665 3467899999999999999999999998876 99999999986322111 11234679999999999
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhhhhc-CCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQNAE-GSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
|.+|+|.|+++++ +.+.+.+....... ..+.+...+.++...++ .+.+.++++.++++.+.+.|+++
T Consensus 213 ~~~GlR~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 283 (353)
T PRK05387 213 SLAGLRVGFAIGH-PELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL 283 (353)
T ss_pred cchhhhceeeecC-HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6678999999986 45556555444322 23445555555544443 24556677778888888988875
No 164
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.90 E-value=3.9e-22 Score=176.48 Aligned_cols=245 Identities=15% Similarity=0.155 Sum_probs=164.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchH-HHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~~~~~ 88 (301)
..+++|+...+.++ .+|.+.... .. ... ....|... ...++++.++++++.+ +.+++++|+ +++..+..
T Consensus 22 ~~~i~l~~~~n~~~--~~~~~~~a~-~~-~~~--~~~~Y~~~---~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~ 92 (360)
T PRK07392 22 DAILDFSASINPLG--PPESVIAAI-QS-ALS--ALRHYPDP---DYRELRLALAQHHQLPPEWILPGNGAAELLTWAGR 92 (360)
T ss_pred ccEEEeCCcCCCCC--CCHHHHHHH-HH-HHH--HhhcCCCc---CHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHH
Confidence 36788885445555 334443332 11 111 12234432 2457888888887665 556666665 88876555
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----------CHHHHHhhcCCCceEEEEeCCCCCccccccH
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------DLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l 158 (301)
.+.+||.|++++|.|..+. ..++..|.+++.++.+ +++++++.. .+++++++++||||||.+.+.
T Consensus 93 ~l~~g~~vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~ 167 (360)
T PRK07392 93 ELAQLRAVYLITPAFGDYR----RALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSR 167 (360)
T ss_pred HhCCCCeEEEECCCcHHHH----HHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCH
Confidence 5567899999999999986 5666788888888764 244444433 467899999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCccccC--------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh
Q 022194 159 RKIAEMAHAHGALLLVDNSIMSPVLSR--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 230 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~~~~~~~~--------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~ 230 (301)
++|.++++++++ +|+||+|....... .......+++.||||.| |.+|+|.||++++++ +.+.+....
T Consensus 168 ~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~~v~~~~-~~~~~~~~~-- 242 (360)
T PRK07392 168 EAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFY-SLPGLRLGYAIAHPD-RLQRWQQWR-- 242 (360)
T ss_pred HHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhh-cCCchheeeeeCCHH-HHHHHHhhC--
Confidence 999999999985 66699987543221 11224579999999999 667899999998754 445444332
Q ss_pred cCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 231 EGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 231 ~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
..+..+...+.++...++. ..+..+.+.++++++.+.|++++++
T Consensus 243 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 289 (360)
T PRK07392 243 DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGL 289 (360)
T ss_pred CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 2345566666665555543 2333455667777888888877654
No 165
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=1e-21 Score=173.50 Aligned_cols=245 Identities=20% Similarity=0.239 Sum_probs=163.6
Q ss_pred ccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCCC----ceEEecch-HH
Q 022194 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKAD----RALCFTSG-MA 81 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~----~~i~~~sG-~~ 81 (301)
....+++|+.++.+... +|.+.... .. .. ....|... |.+. ++++.+++.+.++.+ +.+++++| ++
T Consensus 19 ~~~~~i~l~~~~p~~~~--~~~~~~~~-~~--~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~ 91 (357)
T TIGR03539 19 HPDGIVDLSVGTPVDPV--PPLIRAAL-AA--AA--DAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKE 91 (357)
T ss_pred CCCCeEEccCCCCCCCC--CHHHHHHH-HH--HH--hhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHH
Confidence 34567999854433321 23332221 11 11 22346554 6655 888888888775532 56666666 58
Q ss_pred HHHHHHh-c-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccccc--
Q 022194 82 ALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD-- 157 (301)
Q Consensus 82 ai~~~~~-~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~-- 157 (301)
++..+.. + +++||.|++++|+|..+. ..++..|.+++.++ +.+.+. ..++++|++++|+||||.+.+
T Consensus 92 ~i~~~~~~l~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~--~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~ 162 (357)
T TIGR03539 92 LVAWLPTLLGLGPGDTVVIPELAYPTYE----VGALLAGATPVAAD--DPTELD---PVGPDLIWLNSPGNPTGRVLSVD 162 (357)
T ss_pred HHHHHHHHHcCCCCCEEEECCCCcHHHH----HHHHhcCCEEeccC--ChhhcC---ccCccEEEEeCCCCCcCccCCHH
Confidence 8865544 5 689999999999998886 33456788887774 444333 357899999999999999985
Q ss_pred -HHHHHHHHHHcCCEEEEeCCcCCccccC-------c----cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHH
Q 022194 158 -IRKIAEMAHAHGALLLVDNSIMSPVLSR-------P----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (301)
Q Consensus 158 -l~~l~~l~~~~~~~li~D~~~~~~~~~~-------~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~ 225 (301)
+++|+++|+++|+++|+||+|....+.. + ......+++.||||.+ +.+|+|+|+++++ +.+.+.+.
T Consensus 163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~G~R~G~~i~~-~~~~~~~~ 240 (357)
T TIGR03539 163 ELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRS-NLAGYRAGFVAGD-PALVAELL 240 (357)
T ss_pred HHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEecccccc-CCCceeEEEEecC-HHHHHHHH
Confidence 7779999999999999999986422210 0 1123569999999999 5578999999976 45656555
Q ss_pred HhhhhcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 226 FLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
......+...+...+.++...++. +...++.+.++++.+.+.|++.
T Consensus 241 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ 289 (357)
T TIGR03539 241 TVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA 289 (357)
T ss_pred HHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 555444445555555555555543 3445566677777888888774
No 166
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.90 E-value=6.1e-22 Score=178.95 Aligned_cols=215 Identities=24% Similarity=0.226 Sum_probs=156.7
Q ss_pred HHHHHHHHHhhcCCC--ceEEe-cchHHHHHHHHh-----ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKAD--RALCF-TSGMAALAAVTH-----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~-~sG~~ai~~~~~-----~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.+++++.++++++.+ +.+++ +++|+++..+.. .+++||+|+++++.|++....|...++..|++++.++.+
T Consensus 78 ~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~ 157 (424)
T PLN02855 78 YELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTP 157 (424)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 578889999999873 34555 445688865443 468899999999999987777777778889999888753
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++.+++++++|++++++|+||.+.|+++|+++|+++|+++++|++|+.+... +..+.++|++++|+||++
T Consensus 158 ~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~ 237 (424)
T PLN02855 158 DEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMC 237 (424)
T ss_pred CCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeeccccc
Confidence 789999999889999999999999999999999999999999999999999877654 334567899999999965
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhh---------------------hcCCCCCHHhHHHHHccccc-----HHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQN---------------------AEGSGLAPFDCWICLRGVKT-----MALRVEK 256 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~l~~-----~~~~~~~ 256 (301)
||+| .|+++.+++. .+.+..... ....+.+....+.+..+++. +++..++
T Consensus 238 -gp~G--~G~l~~~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~ 313 (424)
T PLN02855 238 -GPTG--IGFLWGKSDL-LESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEY 313 (424)
T ss_pred -CCCc--cEEEEEchhh-hhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 7877 5888887543 333221100 00111222222223333332 3444556
Q ss_pred HHHHHHHHHHHHHhCCCcc
Q 022194 257 QQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v~ 275 (301)
..+..+++.+.|+++++++
T Consensus 314 ~~~l~~~l~~~L~~~~g~~ 332 (424)
T PLN02855 314 EVELGTYLYEKLSSVPGVR 332 (424)
T ss_pred HHHHHHHHHHHHhcCCCEE
Confidence 6677778888888777664
No 167
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=1.2e-22 Score=179.29 Aligned_cols=208 Identities=17% Similarity=0.208 Sum_probs=154.4
Q ss_pred hHHHHHHHHHhhcCCC-ceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 56 TRDALESLLAKLDKAD-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
...++++.++++++.+ +.+++++|+ +++. ++..++++||+|+++.|.|..+. ..++..|.+++.++.+
T Consensus 58 g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~ 133 (352)
T PRK03321 58 GAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYP----ILVQVAGATPVQVPLTPDHTH 133 (352)
T ss_pred cHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHH----HHHHHcCCEEEEccCCCCCCC
Confidence 4778888888888876 467777886 6665 45567899999999999987765 4456678888888864
Q ss_pred CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCccccC--------ccCCCCcEEEec
Q 022194 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLSR--------PLELGADIVMHS 197 (301)
Q Consensus 128 d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~--~~~~li~D~~~~~~~~~~--------~~~~~~di~~~S 197 (301)
|++++++.+++++++|++++|+||||.+.+.++|.++|+. +++++|+||+|....... .......++++|
T Consensus 134 ~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S 213 (352)
T PRK03321 134 DLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRT 213 (352)
T ss_pred CHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEec
Confidence 6899999998899999999999999999999999999987 599999999987443321 112245799999
Q ss_pred ccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 198 ~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+||.| |.+|+|.|+++++ +.+.+.+.... .....+...+.++...+. .+.+..++..++...+.+.|++.
T Consensus 214 ~SK~~-g~~GlRiG~~v~~-~~~~~~~~~~~--~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~ 286 (352)
T PRK03321 214 FSKAY-GLAGLRVGYAVGH-PEVIAALRKVA--VPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA 286 (352)
T ss_pred chHHh-hhHHHhhhhhcCC-HHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999 5678999999986 45666555432 334555555554444443 34444555666666788888764
No 168
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=2.9e-22 Score=175.56 Aligned_cols=204 Identities=17% Similarity=0.213 Sum_probs=145.5
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CH
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL 129 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~ 129 (301)
..++++.++++++.+ +.+++++| ++++..+...+ +||+|+++.|.|..+. ..++..|.+++.++.+ |+
T Consensus 57 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~-~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~ 131 (337)
T PRK03967 57 SDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF-EGKHIVITPPTFGMYS----FYAKLNGIPVIDVPLKEDFTIDG 131 (337)
T ss_pred HHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh-CCCeEEEeCCChHHHH----HHHHHcCCeEEEeecCCCCCcCH
Confidence 567777777777755 56666666 58887665555 7999999999998765 4556788888888764 56
Q ss_pred HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC----ccCCCCcEEEecccccccCC
Q 022194 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAGH 205 (301)
Q Consensus 130 ~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~sK~~~g~ 205 (301)
+.+++.+ ++++++++++|+||||.+.+.++|.++++ +++++|+||+|....... .......+++.||||.| |.
T Consensus 132 ~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l 208 (337)
T PRK03967 132 ERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAF-GL 208 (337)
T ss_pred HHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhh-cc
Confidence 7787765 57789999999999999999999999995 799999999997432111 11224579999999999 66
Q ss_pred CCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 206 SDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 206 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+|+|.||+++++ .+.+.+..... .+..+...+.++...++ .+.+.++...++++.+.+.|.++
T Consensus 209 ~GlRiG~iv~~~-~~i~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 274 (337)
T PRK03967 209 AGIRAGYAIANE-EIIDALYRIKP--PFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY 274 (337)
T ss_pred hhhhheeeecCH-HHHHHHHhhcC--CCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 789999999874 45565554433 23445555555544443 33444455666666777777653
No 169
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=1.2e-21 Score=174.32 Aligned_cols=217 Identities=22% Similarity=0.209 Sum_probs=158.4
Q ss_pred HHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHhccC---CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLG---TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~~~~---~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+++++.++++++.+ +.++++|+++++. ++.++.. +||+|+++++.|++....+...++..|.+++.++.+
T Consensus 45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 124 (373)
T cd06453 45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD 124 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence 667889999999876 4555666678875 5556666 899999999999987655556667788999988765
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccccc
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (301)
|++++++++.+++++|++++++||||.+.|+++|.++|+++|+++++|++++.+... ...+.++|++++|++|+++
T Consensus 125 ~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~ 204 (373)
T cd06453 125 GQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLG 204 (373)
T ss_pred CCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccC
Confidence 789999999889999999999999999999999999999999999999999877654 2335689999999999996
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhhhh---------------------cCCCCCHHhHHHHHccccc-----HHHHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQNA---------------------EGSGLAPFDCWICLRGVKT-----MALRVEKQ 257 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 257 (301)
+ +| .|+++.+++ +.+.+...... ...+.+.....++..+++. +++.+++.
T Consensus 205 ~-~g--~g~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~ 280 (373)
T cd06453 205 P-TG--IGVLYGKEE-LLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHE 280 (373)
T ss_pred C-CC--cEEEEEchH-HhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 5 44 588888754 43433221100 0011222222222222322 34556667
Q ss_pred HHHHHHHHHHHHhCCCcceE
Q 022194 258 QDNAQKIAEFLASHPRVKKV 277 (301)
Q Consensus 258 ~~~~~~l~~~l~~~~~v~~v 277 (301)
.++++++.+.|++++++..+
T Consensus 281 ~~~~~~l~~~l~~~~~~~~~ 300 (373)
T cd06453 281 HELTAYALERLSEIPGVRVY 300 (373)
T ss_pred HHHHHHHHHHHhcCCCeEEe
Confidence 77788888888887765433
No 170
>PLN02397 aspartate transaminase
Probab=99.89 E-value=1.6e-21 Score=175.62 Aligned_cols=220 Identities=15% Similarity=0.138 Sum_probs=147.6
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC---c-e----EEecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD---R-A----LCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~---~-~----i~~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
..|++. |.+. |+++.+++.+..... + + ++.++|+.++ ..++.++.|||+|++++|.|+.+. ..++
T Consensus 85 ~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~----~~~~ 160 (423)
T PLN02397 85 KEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHH----NIFR 160 (423)
T ss_pred CCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHH----HHHH
Confidence 357766 7766 778888776554321 2 2 2233344333 455666679999999999999997 6667
Q ss_pred cCCcEEEEecC-------CCHHHHHhhcC---CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 116 KTGVVVKRVNT-------CDLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 116 ~~g~~~~~~~~-------~d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
..|.+++.++. .|++.+++.+. ++++++++++||||||.+.+ +++|+++|++||+++|+||+|....
T Consensus 161 ~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~ 240 (423)
T PLN02397 161 DAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFA 240 (423)
T ss_pred HcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCcc
Confidence 78888888764 16777776664 56788888999999999975 7778999999999999999997654
Q ss_pred ccC------c---c--CCCCcEEEecccccccCCCCceeeEEE--EcchhHHH----HHHHhhhhcCCCCCHHhHHHHHc
Q 022194 183 LSR------P---L--ELGADIVMHSATKFIAGHSDVMAGVLA--VKGERLAK----ELYFLQNAEGSGLAPFDCWICLR 245 (301)
Q Consensus 183 ~~~------~---~--~~~~di~~~S~sK~~~g~~g~~~g~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
+.. . . .....++++||||.| +++|+|.||++ ..++.+.+ .+.........+.+...+.++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~-~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 319 (423)
T PLN02397 241 SGDLDADAQSVRMFVEDGHEILVAQSYAKNM-GLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVAT 319 (423)
T ss_pred CCchhhhhHHHHHHHhcCCcEEEEEECcccC-CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHH
Confidence 421 0 1 112479999999999 67889999985 43443333 22222222222233334444333
Q ss_pred cccc----------HHHHHHHHHHHHHHHHHHHHhC
Q 022194 246 GVKT----------MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 246 ~l~~----------~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.++. +.+.++.+.++++.+.+.|+++
T Consensus 320 ~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 320 ILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3222 3445567888888899998876
No 171
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=3.4e-22 Score=176.71 Aligned_cols=242 Identities=19% Similarity=0.211 Sum_probs=155.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~ 87 (301)
..+++|+...+.++.. |.+.... .. . .. ....|...| ..++++.+++.++.+ +.+++++| ++++. ++.
T Consensus 30 ~~~i~l~~~~~~~~~~--~~~~~~~-~~-~-~~-~~~~Y~~~~---~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 30 DDLVKLSSNENPHGPS--PAAVEAI-RE-A-AE-RVHSYPKAS---HADLTAALADRWDVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred cceeEecCCCCCCCCC--HHHHHHH-HH-H-Hh-hhhcCCCCC---HHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 3688888544556643 3333221 11 1 11 123343323 567778888877755 56666666 58886 556
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
.++++||.|++++|.|..+. ......|..++.++.+ +.+++++.. +++++|++++|+||||.+.+.++
T Consensus 101 ~~~~~gd~V~v~~P~y~~~~----~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~~ 175 (357)
T PRK14809 101 AMLDPGDTVLVPDPGFAYYG----MSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLDE 175 (357)
T ss_pred HhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHHH
Confidence 67899999999999998664 3344566666666542 355555544 36799999999999999998777
Q ss_pred HHHHHHHc--CCEEEEeCCcCCccccC-----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCC
Q 022194 161 IAEMAHAH--GALLLVDNSIMSPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (301)
Q Consensus 161 l~~l~~~~--~~~li~D~~~~~~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
+.++++.. +++||+||+|....... ....+..+++.||||.| |.+|+|.|+++++++ +.+.+..... ..
T Consensus 176 ~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~~~-~~~~~~~~~~--~~ 251 (357)
T PRK14809 176 VEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAY-GLAGLRLGYAVVPEE-WADAYARVNT--PF 251 (357)
T ss_pred HHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHh-cCcchhheeeecCHH-HHHHHHHhCC--CC
Confidence 66666543 78999999997543221 11234679999999999 667899999998754 5555544332 34
Q ss_pred CCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHh
Q 022194 234 GLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 234 ~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
..+...+.++...+. .+.+.++.+.++.+.+.+.|..
T Consensus 252 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 291 (357)
T PRK14809 252 AASELACRAGLAALDDDEHVERTVETARWAREYIREELDA 291 (357)
T ss_pred CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 455555555544443 2444455566666667676653
No 172
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=7.1e-22 Score=175.61 Aligned_cols=219 Identities=14% Similarity=0.199 Sum_probs=146.4
Q ss_pred cccCCCCch-HHHHHHHHHhhcC----CC-ceEEecchH-HHHH-HHHhccCCCC-eEEEcCCCCccHHHHHhhhcccCC
Q 022194 48 DYTRSGNPT-RDALESLLAKLDK----AD-RALCFTSGM-AALA-AVTHLLGTGE-EIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 48 ~y~~~g~~~-~~~l~~~l~~~~~----~~-~~i~~~sG~-~ai~-~~~~~~~~g~-~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
.|...|.+. ++++.+++.+.++ .+ +.+++++|+ +++. ++..++.+|| +|++++|+|..+. ..++..|
T Consensus 62 ~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~----~~~~~~g 137 (374)
T PRK02610 62 RYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYG----ILAQTLG 137 (374)
T ss_pred CCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH----HHHHHcC
Confidence 354335443 5556655554431 22 456677775 8885 5566677776 8999999999886 6667788
Q ss_pred cEEEEecCC------CHHHHHhhcC----CCceEEEEeCCCCCccccccHHHHHHHHH-HcCCEEEEeCCcCCccccC--
Q 022194 119 VVVKRVNTC------DLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAH-AHGALLLVDNSIMSPVLSR-- 185 (301)
Q Consensus 119 ~~~~~~~~~------d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~l~~l~~-~~~~~li~D~~~~~~~~~~-- 185 (301)
.+++.++.+ |+++++++++ .++++|++++|+||||.+.+.+++.++++ .+++++|+||+|.......
T Consensus 138 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~ 217 (374)
T PRK02610 138 IPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLV 217 (374)
T ss_pred CEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchH
Confidence 998888753 6788888876 47999999999999999988666555543 2489999999997532211
Q ss_pred --ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc---HHHHHHHHHHH
Q 022194 186 --PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDN 260 (301)
Q Consensus 186 --~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~ 260 (301)
.......+++.||||.+ |.+|+|.||++++ +.+.+.+..... .+..+...+.++...++. +.+..++..++
T Consensus 218 ~~~~~~~~~ivi~SfSK~~-g~~GlRiG~~v~~-~~l~~~l~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK02610 218 GELAQHPNWVILRTFSKAF-RLAAHRVGYAIGH-PELIAVLEKVRL--PYNLPSFSQLAAQLALEHRQELLAAIPEILQE 293 (374)
T ss_pred HHHhcCCCEEEEEecchhc-cCcccceeeeecC-HHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 11223468899999999 6678999999986 456565544432 233445554444444433 23333444555
Q ss_pred HHHHHHHHHhCCCc
Q 022194 261 AQKIAEFLASHPRV 274 (301)
Q Consensus 261 ~~~l~~~l~~~~~v 274 (301)
+..+.+.|++++++
T Consensus 294 r~~l~~~L~~~~~~ 307 (374)
T PRK02610 294 RDRLYQALQELPQL 307 (374)
T ss_pred HHHHHHHHHhCCCc
Confidence 66677888776554
No 173
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.89 E-value=9.2e-22 Score=176.81 Aligned_cols=215 Identities=22% Similarity=0.227 Sum_probs=156.7
Q ss_pred HHHHHHHHHhhcCCC--ceEEe-cchHHHHHHH-Hh----ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKAD--RALCF-TSGMAALAAV-TH----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~-~sG~~ai~~~-~~----~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.+++++.+++++|.+ +.+++ +++++++..+ .. .+++||+|+++++.|++....+...++..|.+++.++.+
T Consensus 64 ~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~ 143 (403)
T TIGR01979 64 YEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDD 143 (403)
T ss_pred HHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCC
Confidence 678889999999976 34544 4456887644 33 357899999999999987766767777889999888754
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++.+.+++++|++++++|+||...|+++|.++|+++|+++++|++|+.+... +..+.++|+++.|+||++
T Consensus 144 ~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~ 223 (403)
T TIGR01979 144 DGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMY 223 (403)
T ss_pred CCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEeccccc
Confidence 789999999999999999999999999999999999999999999999999887653 334568999999999987
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhh---------------------hcCCCCCHHhHHHHHccccc-----HHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQN---------------------AEGSGLAPFDCWICLRGVKT-----MALRVEK 256 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~l~~-----~~~~~~~ 256 (301)
||+| .|+++.+++ +.+.+..... ....+.+......+..+++. .+...++
T Consensus 224 -gp~G--~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~ 299 (403)
T TIGR01979 224 -GPTG--IGVLYGKEE-LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAH 299 (403)
T ss_pred -CCCC--ceEEEEchH-HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 6777 588888754 3332211100 00012223333333333333 2344566
Q ss_pred HHHHHHHHHHHHHhCCCcc
Q 022194 257 QQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v~ 275 (301)
..+.++++.+.|+++++++
T Consensus 300 ~~~l~~~l~~~l~~~~g~~ 318 (403)
T TIGR01979 300 EHELTAYALERLGEIPGLR 318 (403)
T ss_pred HHHHHHHHHHHHhcCCCEE
Confidence 6777777888887776654
No 174
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=3.4e-21 Score=170.56 Aligned_cols=210 Identities=19% Similarity=0.167 Sum_probs=161.4
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+.++++++++++.++.+++++++||++|+. ++..+ ++|||+|++++++|.++. ..+...|.+++.++.+
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~----~~~~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA----NAFVLRGAKIVFVDIRPDTM 105 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHH----HHHHHcCCEEEEEecCCCcC
Confidence 3558999999999999999999999999986 44555 789999999999999886 3345678898888864
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEeccc--cc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KF 201 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~S~s--K~ 201 (301)
|++++++++++++++|+ |+|++|...++++|.++|+++|+++|+|++++.+........| .|+.++||+ |.
T Consensus 106 ~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~ 182 (376)
T TIGR02379 106 NIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETKN 182 (376)
T ss_pred CCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCCc
Confidence 67889999998999987 5678999999999999999999999999999877532222233 377777775 44
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhc-------------------C--CCCCHHhHHHHHcccccHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAE-------------------G--SGLAPFDCWICLRGVKTMALRVEKQQDN 260 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~-------------------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 260 (301)
+. +|..+|+++++++.+.++++...... + .-++...++..+..++.+++..++..++
T Consensus 183 l~--~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~ 260 (376)
T TIGR02379 183 YT--SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLAT 260 (376)
T ss_pred Cc--ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 53 23357999998888877776554311 1 1234455666667788888888888888
Q ss_pred HHHHHHHHHhCC
Q 022194 261 AQKIAEFLASHP 272 (301)
Q Consensus 261 ~~~l~~~l~~~~ 272 (301)
+++..+.|.+++
T Consensus 261 ~~~y~~~L~~~~ 272 (376)
T TIGR02379 261 WQLYQDALKPLE 272 (376)
T ss_pred HHHHHHHhccCC
Confidence 888888887654
No 175
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.89 E-value=4.4e-22 Score=174.76 Aligned_cols=244 Identities=21% Similarity=0.205 Sum_probs=165.0
Q ss_pred ecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCC
Q 022194 15 NFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTG 93 (301)
Q Consensus 15 ~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g 93 (301)
+|+ +++++| ++|.+........ . ....|. ..+..+++++.+++++|.++.+++++|++++. ++..++++|
T Consensus 1 ~~~-~~~~~~--~~~~v~~a~~~~~--~--~~~~~~--~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~g 71 (338)
T cd06502 1 DFR-SDTVTG--PTPEMLEAMAAAN--V--GDDVYG--EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPG 71 (338)
T ss_pred Ccc-cccCCC--CCHHHHHHHHhcc--c--CCcccC--CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCC
Confidence 467 788888 4455554431111 1 111221 23458999999999999668888899998885 666678999
Q ss_pred CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhcCC-------CceEEEEeCCCCCccc--cccHHH
Q 022194 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGP-------WTKLVWVESPTNPRQQ--ICDIRK 160 (301)
Q Consensus 94 ~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~~-------~~~~v~i~~~~np~G~--~~~l~~ 160 (301)
|+|+++++.|......+ ......|++++.++.+ |++++++++.+ ++++|++++|+|+.|. ..++++
T Consensus 72 d~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~ 150 (338)
T cd06502 72 GSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKA 150 (338)
T ss_pred CeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHH
Confidence 99999999987653111 1223468888888763 78999998864 6899999999997443 245888
Q ss_pred HHHHHHHcCCEEEEeCCcCCcc---cc---CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcC--
Q 022194 161 IAEMAHAHGALLLVDNSIMSPV---LS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-- 232 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~---~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~-- 232 (301)
|+++|+++|+++|+|++|..+. .. .....+.|+++.|+||+++.++ +++++.+ +.+.+.+.......+
T Consensus 151 i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~---g~~~~~~-~~~~~~~~~~~~~~~~~ 226 (338)
T cd06502 151 ISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPV---GAVVVGN-RDFIARARRRRKQAGGG 226 (338)
T ss_pred HHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCcc---ceEEECC-HHHHHHHHHHHHHhCCC
Confidence 9999999999999999874321 11 1112467899999999996542 3444444 556665554443322
Q ss_pred CCCCHHhHHHHHccccc--HHHHHHHHHHHHHHHHHHHHhCC
Q 022194 233 SGLAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 233 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
...++..++++...++. +.++.++..++++++.+.|++++
T Consensus 227 ~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~ 268 (338)
T cd06502 227 MRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELG 268 (338)
T ss_pred hhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 23344455555555544 45566788888889999998764
No 176
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=2.5e-21 Score=170.46 Aligned_cols=213 Identities=22% Similarity=0.278 Sum_probs=154.9
Q ss_pred HHHHHHHHHhhcC----CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 57 RDALESLLAKLDK----ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~----~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
++++++.+...++ .++.+++++|++++. ++..+.++||+|+++++.|+++. ..++..+..++.++.+
T Consensus 42 ~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~ 117 (350)
T cd00609 42 REAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYE----AAARLAGAEVVPVPLDEEGG 117 (350)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHCCCEEEEEecccccC
Confidence 5666666666554 335666666678885 55667788999999999999987 4455677888888765
Q ss_pred -CH--HHHHhhcCCCceEEEEeCCCCCccccccH---HHHHHHHHHcCCEEEEeCCcCCcccc--------CccCCCCcE
Q 022194 128 -DL--DEVASAIGPWTKLVWVESPTNPRQQICDI---RKIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADI 193 (301)
Q Consensus 128 -d~--~~l~~~l~~~~~~v~i~~~~np~G~~~~l---~~l~~l~~~~~~~li~D~~~~~~~~~--------~~~~~~~di 193 (301)
+. +.++....+++++|++++++||+|.+.|+ ++|+++|+++|+++|+|++|+.+... .....+.|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~ 197 (350)
T cd00609 118 FLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVI 197 (350)
T ss_pred CccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEE
Confidence 11 56666667889999999999999999875 45568999999999999999765432 133456799
Q ss_pred EEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHH
Q 022194 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 194 ~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~ 269 (301)
++.|++|+++ .+|++.|+++++++.+.+.+.......+...+.....++...++ .+.+..+++.++++++.+.|+
T Consensus 198 ~~~s~~K~~~-~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 276 (350)
T cd00609 198 VLRSFSKTFG-LPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALK 276 (350)
T ss_pred EEeecccccC-CcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999995 44667899998875676766665555444555555544444333 345666778888889999998
Q ss_pred hCCCc
Q 022194 270 SHPRV 274 (301)
Q Consensus 270 ~~~~v 274 (301)
+++..
T Consensus 277 ~~~~~ 281 (350)
T cd00609 277 ELGPL 281 (350)
T ss_pred hcCCc
Confidence 86543
No 177
>PRK08354 putative aminotransferase; Provisional
Probab=99.89 E-value=1e-21 Score=170.36 Aligned_cols=151 Identities=19% Similarity=0.259 Sum_probs=120.9
Q ss_pred hHHHHHHHHHhhcCCCceEEecch-HHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHh
Q 022194 56 TRDALESLLAKLDKADRALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVAS 134 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~~i~~~sG-~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~ 134 (301)
....++++++++++. .+++++| ++++..+..++.+||+|++++|+|..+. ..++..|.+++.++ .|++.+++
T Consensus 41 ~~~~l~~~ia~~~~~--~I~vt~G~~~al~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~~~-~d~~~l~~ 113 (311)
T PRK08354 41 YYEWLEEEFSKLFGE--PIVITAGITEALYLIGILALRDRKVIIPRHTYGEYE----RVARFFAARIIKGP-NDPEKLEE 113 (311)
T ss_pred ChHHHHHHHHHHHCC--CEEECCCHHHHHHHHHHhhCCCCeEEEeCCCcHHHH----HHHHHcCCEEeecC-CCHHHHHH
Confidence 356788899999884 3556666 5888755566668999999999999997 56667888887775 46888888
Q ss_pred hcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEecccccccCCCCcee
Q 022194 135 AIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIAGHSDVMA 210 (301)
Q Consensus 135 ~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK~~~g~~g~~~ 210 (301)
.++ +++++++++|+||||.+.+ +++|+++|+++|+++|+||+|....... .......+++.||||+| +.+|+|.
T Consensus 114 ~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~-~l~GlRi 191 (311)
T PRK08354 114 LVE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSY-GLPGIRV 191 (311)
T ss_pred hhc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhc-CCcccee
Confidence 876 5678999999999999976 6778888999999999999997654321 12245689999999999 6678999
Q ss_pred eEEEE
Q 022194 211 GVLAV 215 (301)
Q Consensus 211 g~~~~ 215 (301)
|++++
T Consensus 192 G~~v~ 196 (311)
T PRK08354 192 GYVKG 196 (311)
T ss_pred eeeee
Confidence 99998
No 178
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=4e-21 Score=171.24 Aligned_cols=212 Identities=23% Similarity=0.271 Sum_probs=164.3
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+..+++++.+++++|.++.+++++|++|+. ++.++ +++||+|+++++.|..+. ..+...|++++.++.+
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATA----NCALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH----HHHHHcCCEEEEEecCCCcC
Confidence 3568999999999999998999999999986 44556 789999999999998875 4556788999988763
Q ss_pred --CHHHHHhhcC----CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCC----cEEEec
Q 022194 128 --DLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA----DIVMHS 197 (301)
Q Consensus 128 --d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~----di~~~S 197 (301)
|++++++.++ +++++|+++ |++|...++++|+++|+++|+++|+|++|+.+........|. |+.++|
T Consensus 104 ~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S 180 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFS 180 (380)
T ss_pred CcCHHHHHHHhhcccCCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEe
Confidence 7899999998 688988854 468999999999999999999999999999875433333344 999999
Q ss_pred cc--ccccCCCCceeeEEEEcchhHHHHHHHhhhhc-------------------------CCCCCHHhHHHHHcccccH
Q 022194 198 AT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-------------------------GSGLAPFDCWICLRGVKTM 250 (301)
Q Consensus 198 ~s--K~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~l~~~ 250 (301)
+| |+++.+ .+|+++.+++.+.++++...... ...++...++..+..++.+
T Consensus 181 ~~~~K~~~~~---~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l 257 (380)
T TIGR03588 181 FHPVKIITTA---EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL 257 (380)
T ss_pred cCCCCccccc---CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH
Confidence 87 888544 36888888887777665433211 0122444445555556777
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 251 ALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.+..++..++++++.+.|.+.+.+.
T Consensus 258 ~~~~~~r~~~~~~~~~~L~~~~~~~ 282 (380)
T TIGR03588 258 DRFVAKRREIAARYDRLLKDLPYFT 282 (380)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 8888888999999999998877553
No 179
>PRK04311 selenocysteine synthase; Provisional
Probab=99.89 E-value=7.2e-22 Score=177.60 Aligned_cols=213 Identities=23% Similarity=0.291 Sum_probs=159.3
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHHHHHhccCCCCeEEEcCCCCc---cHHHHHhhhcccCCcEEEEecC---CC
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYG---GTDRLLSRVTPKTGVVVKRVNT---CD 128 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~---~~~~~~~~~~~~~g~~~~~~~~---~d 128 (301)
+..+.+++.+++++|+++++++++|++|+.+++..+.+||+|++++..+. +..+ +...++..|+++++++. .+
T Consensus 127 ~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l~~GdeVIvs~~e~~~~ggs~~-i~~~~~~~G~~l~~v~~~~~t~ 205 (464)
T PRK04311 127 SRDRALAALLCALTGAEDALVVNNNAAAVLLALNALAAGKEVIVSRGELVEIGGAFR-IPDVMRQAGARLVEVGTTNRTH 205 (464)
T ss_pred hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCEEEEcchhhhhcCcchh-hHHHHHHCCcEEEEECCCCCCC
Confidence 34689999999999999999999999999866677899999999987544 2222 23456778999999886 37
Q ss_pred HHHHHhhcCCCceEEEEeCCCCC--cc--ccccHHHHHHHHHHcCCEEEEeCCcCCc------------cccCccCCCCc
Q 022194 129 LDEVASAIGPWTKLVWVESPTNP--RQ--QICDIRKIAEMAHAHGALLLVDNSIMSP------------VLSRPLELGAD 192 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np--~G--~~~~l~~l~~l~~~~~~~li~D~~~~~~------------~~~~~~~~~~d 192 (301)
++++++++++++++|++.+++|+ +| ...|+++|+++||+||+++++|.+.+.. ....+.+.|+|
T Consensus 206 ~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaD 285 (464)
T PRK04311 206 LRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVD 285 (464)
T ss_pred HHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCc
Confidence 88999999999999999999997 34 5679999999999999999999954311 11234557999
Q ss_pred EEEecccccccCCCCceeeEEEEcchhHHHHHHH--h---hhhcCCCCCHHh-----------HHHHHcccccHHHHHHH
Q 022194 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--L---QNAEGSGLAPFD-----------CWICLRGVKTMALRVEK 256 (301)
Q Consensus 193 i~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~ 256 (301)
++++|.+|+++|| ++|+++++++ +.++++. + ....+.++++.. ++..+..++.+..+.++
T Consensus 286 iv~fSg~K~LgGp---~~G~i~g~~~-li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~ 361 (464)
T PRK04311 286 LVTFSGDKLLGGP---QAGIIVGKKE-LIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEE 361 (464)
T ss_pred EEEecCcccccCC---ceEEEEEcHH-HHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHH
Confidence 9999999999876 4799988754 4454442 1 111122233322 23334444556777789
Q ss_pred HHHHHHHHHHHHHhCC
Q 022194 257 QQDNAQKIAEFLASHP 272 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~ 272 (301)
+.++++.+.++|+.++
T Consensus 362 ~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 362 LRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999875
No 180
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.89 E-value=4.6e-21 Score=169.21 Aligned_cols=212 Identities=22% Similarity=0.253 Sum_probs=162.2
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...++++.+++++|.++++++++|++|+. ++..+ +++||+|+++.+.|+++.. .+...|.+++.++.+
T Consensus 17 ~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~ 92 (352)
T cd00616 17 GPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN----AILLLGATPVFVDIDPDTY 92 (352)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH----HHHHcCCeEEEEecCCCcC
Confidence 4668999999999999998999999999986 45555 5799999999999998864 344578888887653
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCcc--CCCCcEEEeccc--cc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSAT--KF 201 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~--~~~~di~~~S~s--K~ 201 (301)
|++++++++++++++|++++ ++|...|+++|.++|+++|+++|+|++|+.+...... ....|+.+.|++ |+
T Consensus 93 ~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~ 169 (352)
T cd00616 93 NIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPTKN 169 (352)
T ss_pred CcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCCCC
Confidence 68999999988899998764 6899999999999999999999999999877654322 222588999977 99
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhc---------------CCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAE---------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 266 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 266 (301)
++++ .+|+++.+++.+.+.+....... ...+++..++..+..++.+.+..++..++.+++.+
T Consensus 170 ~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~ 246 (352)
T cd00616 170 LTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKE 246 (352)
T ss_pred Cccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9543 36888887766666554433211 12344555555555566677777888899999999
Q ss_pred HHHhCCCcc
Q 022194 267 FLASHPRVK 275 (301)
Q Consensus 267 ~l~~~~~v~ 275 (301)
.|++++++.
T Consensus 247 ~L~~~~g~~ 255 (352)
T cd00616 247 LLADLPGIR 255 (352)
T ss_pred HhcCCCCcc
Confidence 999877664
No 181
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.89 E-value=5.9e-22 Score=170.33 Aligned_cols=206 Identities=20% Similarity=0.166 Sum_probs=144.6
Q ss_pred HHHHHHHHHhhcCCCceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--------
Q 022194 57 RDALESLLAKLDKADRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------- 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-------- 126 (301)
.+++++.+++++|.++.+++++| ++++. ++.+++++||+|++++++|.++...+ ...|..+++++.
T Consensus 61 i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~----~~~g~~~~~v~~~~~~~~~~ 136 (294)
T cd00615 61 IKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGL----VLSGAVPVYLKPERNPYYGI 136 (294)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHH----HHCCCEEEEecCccCcccCc
Confidence 88999999999999988876666 57774 77788999999999999998886443 456777777753
Q ss_pred ---CCHHHHHhhcC--CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc-----cc-CccCCCCcEEE
Q 022194 127 ---CDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LS-RPLELGADIVM 195 (301)
Q Consensus 127 ---~d~~~l~~~l~--~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~-----~~-~~~~~~~di~~ 195 (301)
.|+++++++++ +++++|++++| |++|.+.|+++|+++|+++|+++|+|++|+... .. .....++|+++
T Consensus 137 ~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~ 215 (294)
T cd00615 137 AGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVV 215 (294)
T ss_pred CCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEE
Confidence 26899999986 46899999988 689999999999999999999999999997532 11 22345899999
Q ss_pred ecccccccCCCCceeeEEEEcch-hHHHHHHHhhhhcCC-CCCHHhHHHHHcccccH----HHHHHHHHHHHHHHHHHHH
Q 022194 196 HSATKFIAGHSDVMAGVLAVKGE-RLAKELYFLQNAEGS-GLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 196 ~S~sK~~~g~~g~~~g~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~ 269 (301)
.|+||+++|+. .+|++..+++ ....++......... +.+......+..+.+.+ .++.++..++++.+++.|.
T Consensus 216 ~S~hK~l~g~~--~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 216 QSTHKTLPALT--QGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred EchhcccchHh--HHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 99999986653 2466655543 222333322222222 22222222333333222 3455667777777777664
No 182
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.89 E-value=2.1e-21 Score=173.86 Aligned_cols=211 Identities=16% Similarity=0.094 Sum_probs=157.2
Q ss_pred hHHHHHHHHHhhcCCC--c-eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 56 TRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~-~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.++++++.++++++.+ + ++++++|++++. ++..++++||+|+++++.|++.. |...++..|.+++.++.+
T Consensus 43 ~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~ 120 (401)
T PLN02409 43 LTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQG 120 (401)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCC
Confidence 3888999999999875 2 455666678875 56678899999999998887653 446677888888888754
Q ss_pred -CHHHHHhhcCC----CceEEEEeCCCCCccccccHHHHHHH--HHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccc
Q 022194 128 -DLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIAEM--AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSAT 199 (301)
Q Consensus 128 -d~~~l~~~l~~----~~~~v~i~~~~np~G~~~~l~~l~~l--~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~s 199 (301)
|++++++++++ ++++|++++++|+||.+.|+++|.++ |+++|+++|+|++++.+... +....++|+++.|.|
T Consensus 121 ~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~ 200 (401)
T PLN02409 121 ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQ 200 (401)
T ss_pred CCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCc
Confidence 68999999875 78999999999999999999999999 99999999999999987765 345568999999999
Q ss_pred ccccCCCCceeeEEEEcchhHHHHHHHhhh--------------hc----CCCCCHHhHHHHHccccc-----HHHHHHH
Q 022194 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQN--------------AE----GSGLAPFDCWICLRGVKT-----MALRVEK 256 (301)
Q Consensus 200 K~~~g~~g~~~g~~~~~~~~~~~~~~~~~~--------------~~----~~~~~~~~~~~~~~~l~~-----~~~~~~~ 256 (301)
|++++|+| .|+++.+++. .+++..... .. ..+.+....+++..+++. +++..++
T Consensus 201 K~l~~P~G--~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~ 277 (401)
T PLN02409 201 KALSLPTG--LGIVCASPKA-LEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIAR 277 (401)
T ss_pred cccCcCCC--cceeEECHHH-HHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99988887 5999887654 343321100 01 112333334444444443 3445566
Q ss_pred HHHHHHHHHHHHHhC
Q 022194 257 QQDNAQKIAEFLASH 271 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (301)
..+.++++.+.|++.
T Consensus 278 ~~~l~~~l~~~L~~~ 292 (401)
T PLN02409 278 HARLGEATRLAVEAW 292 (401)
T ss_pred HHHHHHHHHHHHHHc
Confidence 777777788877654
No 183
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=4e-21 Score=170.79 Aligned_cols=209 Identities=21% Similarity=0.271 Sum_probs=158.9
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...++++.+++++|.+.+++++||++|+. ++.++ +++||+|+++++.|.++. ..+...|++++.++.+
T Consensus 32 g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~----~~~~~~G~~~v~vd~~~~~~ 107 (379)
T PRK11658 32 GPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTL----NMIVLLGATPVMVDVDRDTL 107 (379)
T ss_pred CHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHH----HHHHHcCCEEEEEecCCCcC
Confidence 4679999999999999999999999999986 55566 789999999999999886 4445678999888753
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC---ccCCCCcEEEecccccc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSATKFI 202 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~---~~~~~~di~~~S~sK~~ 202 (301)
|++++++++.+++++|+ |.|++|...++++|+++|+++|+++|+|++++.+.... ....|.+++.++.+|.+
T Consensus 108 ~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l 184 (379)
T PRK11658 108 MVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNI 184 (379)
T ss_pred CcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcC
Confidence 78999999998899887 55679999999999999999999999999998765432 22345555555555777
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhhc----------------------C--CCCCHHhHHHHHcccccHHHHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNAE----------------------G--SGLAPFDCWICLRGVKTMALRVEKQQ 258 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~l~~~~~~~~~~~ 258 (301)
.++ .+|+++.+++.+.++++...... | ..++...++..+..++.+++..++..
T Consensus 185 ~~g---~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~ 261 (379)
T PRK11658 185 TCA---EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRR 261 (379)
T ss_pred ccc---CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 553 47888888777776665433210 1 11333445555556667777778888
Q ss_pred HHHHHHHHHHHhCC
Q 022194 259 DNAQKIAEFLASHP 272 (301)
Q Consensus 259 ~~~~~l~~~l~~~~ 272 (301)
++++++.+.|++.+
T Consensus 262 ~~a~~~~~~L~~~~ 275 (379)
T PRK11658 262 EIAARYLQALADLP 275 (379)
T ss_pred HHHHHHHHHhcCCC
Confidence 88888888888765
No 184
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.88 E-value=2.4e-21 Score=166.22 Aligned_cols=212 Identities=18% Similarity=0.154 Sum_probs=159.1
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhc---c---CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHL---L---GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~---~---~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
..++.++++++++|++ +++++++||++.+ ++... . +.|.+|+++.-.|+.+....+.. +..|.++.++++
T Consensus 45 ~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~V 123 (386)
T COG1104 45 AVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPV 123 (386)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEEEeCC
Confidence 3778889999999986 4555555588875 55542 1 25789999999999998887655 788999999998
Q ss_pred C-----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEecccc
Q 022194 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATK 200 (301)
Q Consensus 127 ~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK 200 (301)
+ |+++|++++++++.+|.+.+.||.+|.++|+++|.++||++++++++|.+++.|..+- ....++|+...|.||
T Consensus 124 ~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK 203 (386)
T COG1104 124 DSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHK 203 (386)
T ss_pred CCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhh
Confidence 7 8999999999999999999999999999999999999999999999999999998874 445589999999999
Q ss_pred cccCCCCceeeEEEEcchhHHHH-HHHhhh---hcCCCCCHHhHHHHHccc----ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 201 FIAGHSDVMAGVLAVKGERLAKE-LYFLQN---AEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+. ||.|+ |+++.++...... +....+ ....+.+......+-+++ +.+....+++...+.+|.+.|++.
T Consensus 204 ~~-GpkGi--GaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~ 279 (386)
T COG1104 204 FG-GPKGI--GALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEI 279 (386)
T ss_pred cc-CCCce--EEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 87 89985 7777765332221 111111 112333444444433333 345555666777777788877753
No 185
>PLN02651 cysteine desulfurase
Probab=99.88 E-value=2.9e-21 Score=171.18 Aligned_cols=214 Identities=18% Similarity=0.134 Sum_probs=153.4
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHh----ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTH----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~----~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+++++.++++++.+ +.+++++|++++. ++.. +.++||+|++++..|+++...+... +..|++++.++.+
T Consensus 45 ~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~-~~~g~~v~~v~~~~~ 123 (364)
T PLN02651 45 VEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHL-QQEGFEVTYLPVKSD 123 (364)
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHH-HhcCCEEEEEccCCC
Confidence 778889999999876 4455555678764 3222 3578999999999998877666443 4678888888753
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccccc
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (301)
|++++++++++++++|++++++|+||.+.|+++|.++||++|+++++|++++.+..+ +....++|+++.|.||+ +
T Consensus 124 ~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~-~ 202 (364)
T PLN02651 124 GLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKI-Y 202 (364)
T ss_pred CcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhh-C
Confidence 789999999999999999999999999999999999999999999999999988754 55667899999999997 5
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhh-------hhcCCCCCHHhHHHHHcccccH----HHHHHHHHHHHHHHHHHHHh-C
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLAS-H 271 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~-~ 271 (301)
||.| .|+++.+++.+.+ +.... .....+.+......+..+++.+ +...++..+..+++.+.|++ .
T Consensus 203 gp~G--~g~l~v~~~~~~~-l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~ 279 (364)
T PLN02651 203 GPKG--VGALYVRRRPRVR-LEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKL 279 (364)
T ss_pred CCCc--eEEEEEcCCCCCC-CCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 8877 4888887653321 11110 0112233434444444444443 23334555556667777664 4
Q ss_pred CCcc
Q 022194 272 PRVK 275 (301)
Q Consensus 272 ~~v~ 275 (301)
+++.
T Consensus 280 ~~~~ 283 (364)
T PLN02651 280 GGVR 283 (364)
T ss_pred CCEE
Confidence 5553
No 186
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.1e-21 Score=171.76 Aligned_cols=240 Identities=10% Similarity=0.087 Sum_probs=153.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCcc-ccCCCCchHHHHHHHHHhhcC---C-CceEEecchH-HHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYD-YTRSGNPTRDALESLLAKLDK---A-DRALCFTSGM-AALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~-y~~~g~~~~~~l~~~l~~~~~---~-~~~i~~~sG~-~ai~ 84 (301)
...++|+...++++.. |.+...... ... ...+. |...+ ..++++.+++.++ . ++.+++++|+ +++.
T Consensus 19 ~~~i~l~~~~~~~~~p--~~~~~~~~~--~~~-~~~~~~Y~~~~---~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~ 90 (335)
T PRK14808 19 RDRTYLALNENPFPFP--EDLVDEVFR--RLN-SDTLRIYYDSP---DEELIEKILSYLDTDFLSKNNVSVGNGADEIIY 90 (335)
T ss_pred CceeEecCCCCCCCCC--HHHHHHHHH--Hhh-hhhhhcCCCCC---hHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHH
Confidence 5778887555555533 333322111 111 11122 33333 4455555665554 3 3566677775 8887
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHH-HhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEV-ASAIGPWTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l-~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
.++..+ |.|++++|+|..+. ..++..|.+++.++.++--.+ +..+ ..++++++++|+||||.+.+.+++.+
T Consensus 91 ~~~~~~---d~v~v~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~-~~~~~i~i~nP~NPTG~~~s~~~l~~ 162 (335)
T PRK14808 91 VMMLMF---DRSVFFPPTYSCYR----IFAKAVGAKFLEVPLTKDLRIPEVNV-GEGDVVFIPNPNNPTGHVFEREEIER 162 (335)
T ss_pred HHHHHh---CcEEECCCCHHHHH----HHHHHcCCeEEEecCCCcCCCChhHc-cCCCEEEEeCCCCCCCCCcCHHHHHH
Confidence 655555 67999999999986 667788999999987521000 1112 35689999999999999999999999
Q ss_pred HHHHcCCEEEEeCCcCCccccC----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHh
Q 022194 164 MAHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 239 (301)
Q Consensus 164 l~~~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
++ ++++++|+||+|....... .......+++.||||++ +.+|+|.||+++++ .+.+.+..... ....+...
T Consensus 163 l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~-~l~GlRvG~~v~~~-~~~~~l~~~~~--~~~~~~~~ 237 (335)
T PRK14808 163 IL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAF-SLAAQRIGYVVSSE-KFIDAYNRVRL--PFNVSYVS 237 (335)
T ss_pred HH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhc-cCcccceEEEEeCH-HHHHHHHHhcC--CCCCCHHH
Confidence 88 5899999999987432111 11234679999999999 66789999999875 45565544442 23344444
Q ss_pred HHHHHcccc---cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 240 CWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 240 ~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.++...++ .+.+..+.+.++.+.+.+.|++.
T Consensus 238 q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 272 (335)
T PRK14808 238 QMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 444444433 33455566677777788888765
No 187
>PRK02948 cysteine desulfurase; Provisional
Probab=99.88 E-value=3.3e-21 Score=171.91 Aligned_cols=212 Identities=17% Similarity=0.164 Sum_probs=155.0
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHHhcc----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~~~~----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+++++.+++++|.+ +.+++++| ++++. ++..++ ++|++|++++..|+++...+ ..++..|++++.++.+
T Consensus 45 ~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~-~~~~~~g~~v~~v~~~~~ 123 (381)
T PRK02948 45 LQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYF-QSLESQGYTVTEIPVDKS 123 (381)
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHH-HHHHhCCCEEEEEeeCCC
Confidence 778889999999864 55666555 68875 444443 57899999998888887665 3456778888888754
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccccc
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (301)
|++++++.+++++++|++++++||||.+.|+++|.++|+++|+++++|+++..+... +..+.++|+++.|+||++
T Consensus 124 ~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~- 202 (381)
T PRK02948 124 GLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIY- 202 (381)
T ss_pred CCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcC-
Confidence 789999999888999999999999999999999999999999999999998877543 344568999999999987
Q ss_pred CCCCceeeEEEEcchhHHHHHHH----hhhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhCC
Q 022194 204 GHSDVMAGVLAVKGERLAKELYF----LQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
||+| .|+++.+++........ ......++.+.....++..+++ .+.+.++++.++++++.+.|+++.
T Consensus 203 gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 277 (381)
T PRK02948 203 GPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP 277 (381)
T ss_pred CCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6877 47777775531111110 0011223444444444444443 345566777888888888888763
No 188
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=3.5e-21 Score=172.85 Aligned_cols=252 Identities=20% Similarity=0.150 Sum_probs=166.2
Q ss_pred CccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC--CCchHHHHHH----HHHhhcCCCceEE-ecchH
Q 022194 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALES----LLAKLDKADRALC-FTSGM 80 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~----~l~~~~~~~~~i~-~~sG~ 80 (301)
..+...+++-.++||+ +|.+..............++.+++. |++..+++++ .+++++|.+.+++ ++||+
T Consensus 25 ~~~~~~~~l~~sen~~----~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~ 100 (416)
T PRK13034 25 ERQQDHLELIASENFT----SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGS 100 (416)
T ss_pred HHHhcCeeecccccCC----CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcH
Confidence 3445677776689997 4555544322111122234456666 7777999998 9999999998866 58999
Q ss_pred HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEE--EEecC------CCHHHHHhhcC-CCceEEEEeCC
Q 022194 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVV--KRVNT------CDLDEVASAIG-PWTKLVWVESP 148 (301)
Q Consensus 81 ~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~--~~~~~------~d~~~l~~~l~-~~~~~v~i~~~ 148 (301)
.|+. ++.++++|||+|++.+..|.+... ..+.. .+..+ ..++. .|++++++.++ .++++|+++.+
T Consensus 101 ~A~~~~l~al~~~GD~Vl~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~ 177 (416)
T PRK13034 101 QANGAVYLALLKPGDTILGMSLSHGGHLT---HGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS 177 (416)
T ss_pred HHHHHHHHHhcCCCCEEEEcCccceeeee---cCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC
Confidence 8874 777889999999999998877321 11110 11111 22222 47888888875 36788887655
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccC----CCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
. .|...|+++|.++|+++|+++++|++|+.|....... .++|++++|+||+++||. +|+++++++.+...+
T Consensus 178 ~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~ 252 (416)
T PRK13034 178 A--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKI 252 (416)
T ss_pred c--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCC---CeEEEECcHHHHHHH
Confidence 4 4678899999999999999999999998776542211 258999999999997764 588888776665544
Q ss_pred HHhhhhc--CCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 225 YFLQNAE--GSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 225 ~~~~~~~--~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+...... +...++..++.....++ ...++++++.++++++++.|++.
T Consensus 253 ~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 253 NSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER 305 (416)
T ss_pred HhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 3321111 11222222222222222 12445789999999999999865
No 189
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=4.9e-21 Score=171.85 Aligned_cols=215 Identities=19% Similarity=0.153 Sum_probs=153.8
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecchHHHHHH-HHhc----cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~-~~~~----~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
..+++++.+++++|.+ +++++++|++++.. +..+ .++||+|+++.+.|+++...+. .++..|++++.++.+
T Consensus 48 ~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~~ 126 (402)
T TIGR02006 48 AVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYLPPKS 126 (402)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEEccCC
Confidence 3678889999999975 45555555788753 3332 3689999999999998876653 335568899888764
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++.+++++++++++|++++++|+||.+.|+++|.++|+++|+++++|++++.+... +....++|+++.|++|++
T Consensus 127 ~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~ 206 (402)
T TIGR02006 127 NGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIY 206 (402)
T ss_pred CCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhc
Confidence 789999999888999999999999999999999999999999999999999988765 444568999999999977
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhh-------hhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
||+| .|+++.+++.... +.... .....+.+......+..+++. +....++..+..+++.+.|+++
T Consensus 207 -gp~G--~G~l~~~~~~~~~-~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 282 (402)
T TIGR02006 207 -GPKG--IGALYVRRKPRVR-LEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSI 282 (402)
T ss_pred -CCCc--eEEEEEccCCCCC-CCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 6777 4777776543221 11110 011123333333333333333 3344456666777788888777
Q ss_pred CCcc
Q 022194 272 PRVK 275 (301)
Q Consensus 272 ~~v~ 275 (301)
+++.
T Consensus 283 ~~v~ 286 (402)
T TIGR02006 283 EEVY 286 (402)
T ss_pred CCEE
Confidence 7653
No 190
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.87 E-value=8.3e-21 Score=167.87 Aligned_cols=211 Identities=18% Similarity=0.161 Sum_probs=153.1
Q ss_pred hHHHHHHHHHhhcCCC--c-eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 56 TRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~-~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
..+++++.+++++|.+ + .+++++|++++. ++.+++++||+|++.++.|++.. +...++..|.+++.++.+
T Consensus 33 ~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 110 (356)
T cd06451 33 LMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGEA 110 (356)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCCC
Confidence 3789999999999974 3 445666688885 66678899999999988776531 224556678888887643
Q ss_pred -CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccC
Q 022194 128 -DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 -d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (301)
|.+++++.+++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+... .....+.|+++.|+||++++
T Consensus 111 ~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~ 190 (356)
T cd06451 111 VSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGA 190 (356)
T ss_pred CCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccC
Confidence 78999999986 8999999999999999999999999999999999999998866532 33455789999999999988
Q ss_pred CCCceeeEEEEcchhHHHHHHH----hhh---------------hcCCCCCHHhHHHHHccccc-----HHHHHHHHHHH
Q 022194 205 HSDVMAGVLAVKGERLAKELYF----LQN---------------AEGSGLAPFDCWICLRGVKT-----MALRVEKQQDN 260 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~ 260 (301)
|.| .|+++.+++ +.+.+.. ... ....+.+....+++..+++. +++..++..++
T Consensus 191 p~g--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~ 267 (356)
T cd06451 191 PPG--LGPIAFSER-ALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRL 267 (356)
T ss_pred CCC--cceeEECHH-HHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 766 588888765 4444332 000 11122333333333333333 34455666777
Q ss_pred HHHHHHHHHhC
Q 022194 261 AQKIAEFLASH 271 (301)
Q Consensus 261 ~~~l~~~l~~~ 271 (301)
++++.+.|++.
T Consensus 268 ~~~l~~~L~~~ 278 (356)
T cd06451 268 AKALREGLEAL 278 (356)
T ss_pred HHHHHHHHHHc
Confidence 88888888764
No 191
>PLN02672 methionine S-methyltransferase
Probab=99.87 E-value=8.8e-21 Score=182.57 Aligned_cols=214 Identities=14% Similarity=0.126 Sum_probs=157.0
Q ss_pred CCch-HHHHHHHHHhhcCCC----ceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEec
Q 022194 53 GNPT-RDALESLLAKLDKAD----RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (301)
Q Consensus 53 g~~~-~~~l~~~l~~~~~~~----~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~ 125 (301)
|.+. ++++.+++++.+|.+ +.+++++|+ +++. ++..+++|||.|+++.|+|+.+. ..++..|.+++.++
T Consensus 731 g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~----~~a~~~Ga~vv~Vp 806 (1082)
T PLN02672 731 SETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYV----SAAKFLKANFRRIP 806 (1082)
T ss_pred CChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCEEEEEe
Confidence 4444 899999999988764 368888886 6675 66778999999999999999997 55667888998888
Q ss_pred CC-------CHHHHHhhcCC-CceEEEEeCCC-CCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-c-----c
Q 022194 126 TC-------DLDEVASAIGP-WTKLVWVESPT-NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-P-----L 187 (301)
Q Consensus 126 ~~-------d~~~l~~~l~~-~~~~v~i~~~~-np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-~-----~ 187 (301)
.+ |++.+++++++ +.+.|++++|+ ||||.+.+ +++|+++|++||++||+||+|+...+.. . .
T Consensus 807 l~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl 886 (1082)
T PLN02672 807 TKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDL 886 (1082)
T ss_pred cccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccch
Confidence 64 57889998875 45689999997 99999975 7889999999999999999997433211 0 0
Q ss_pred -----C------CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCC-CCCHHhHHHHHcc--------c
Q 022194 188 -----E------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRG--------V 247 (301)
Q Consensus 188 -----~------~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--------l 247 (301)
. ....++++||||.+ +.+|+|.||++++++.+.+.+......... ..+...+.+++.. .
T Consensus 887 ~s~l~~~~~~sks~nVIvL~SfSKkf-~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~ 965 (1082)
T PLN02672 887 KSILSRLKSSNPSFAVALLGGLSTEL-LSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLL 965 (1082)
T ss_pred hhHHHHhccccCCceEEEEeCcHHhh-ccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHH
Confidence 0 12568999999999 668999999999877676766554332222 2222333332221 1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 248 KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.+.++.+.++++++.+.|+++
T Consensus 966 ~~l~e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 966 DGVAEQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 224556667888888999999875
No 192
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.87 E-value=1.6e-20 Score=169.41 Aligned_cols=220 Identities=19% Similarity=0.208 Sum_probs=144.9
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecchH-HHHH-HHHhccC-----CCCeEEE-cCCCCccHHHHHh--
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSGM-AALA-AVTHLLG-----TGEEIVA-GDDLYGGTDRLLS-- 111 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG~-~ai~-~~~~~~~-----~g~~Vlv-~~~~y~~~~~~~~-- 111 (301)
..|.+. |.+. ++++.+++.+.+|.. +.|++++|+ +++. ++..+++ +||.|++ .+|+|+.+.....
T Consensus 68 ~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~ 147 (416)
T PRK09440 68 GNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEE 147 (416)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhcc
Confidence 356655 6655 888888888776542 567777775 8886 4455564 5899999 7999999864221
Q ss_pred hhcccCCcEEEEecC------CCHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 112 RVTPKTGVVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 112 ~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
......+..+..++. .|++.++ +.++++++++++|+||||.+.+ +++|+++|+++|+++|+||+|+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~ 225 (416)
T PRK09440 148 DLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF 225 (416)
T ss_pred CceeecccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC
Confidence 112222333333322 2567776 3567899999999999999986 7789999999999999999997422
Q ss_pred cc----C--ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc--H----
Q 022194 183 LS----R--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT--M---- 250 (301)
Q Consensus 183 ~~----~--~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~---- 250 (301)
.. . +...+..++++||||+ +.+|+|.||+++++ .+.+.+.........+.+...+.++...++. +
T Consensus 226 ~~~~~~~~~~~~~~~vI~~~SfSK~--~~pGlRiG~~i~~~-~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 302 (416)
T PRK09440 226 PGIIFSEATPLWNPNIILCMSLSKL--GLPGVRCGIVIADE-EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLS 302 (416)
T ss_pred CCcchhhcCccccCCeEEEeccccc--CCCcceEEEEeCCH-HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHH
Confidence 11 1 1113567999999994 56789999999864 5666666555544444555555555444432 1
Q ss_pred HH-HHHHHHHHHHHHHHHHHhC
Q 022194 251 AL-RVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 251 ~~-~~~~~~~~~~~l~~~l~~~ 271 (301)
.+ .++.+.++.+.+.+.|+++
T Consensus 303 ~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 303 ETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 12 2344555666677777653
No 193
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.87 E-value=1.2e-20 Score=169.16 Aligned_cols=159 Identities=28% Similarity=0.319 Sum_probs=129.1
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHHHH-HHh---ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAALAA-VTH---LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~~-~~~---~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
.+++++.+++++|.+ +.+++++| ++++.. +.. .+++||+|++.++.|.+....+...++..|++++.++.+
T Consensus 62 ~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~ 141 (397)
T TIGR01976 62 VDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEAT 141 (397)
T ss_pred HHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccC
Confidence 789999999999875 33555444 677653 323 368999999999999888766666677889998888753
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccccc
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (301)
|++++++++++++++|++++|+||||.+.|+++|.++|+++|+++++|+++..+... +..+.++|++++|+||++
T Consensus 142 ~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~- 220 (397)
T TIGR01976 142 GELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFF- 220 (397)
T ss_pred CCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhc-
Confidence 689999999888999999999999999999999999999999999999999765433 344568999999999998
Q ss_pred CCCCceeeEEEEcchh
Q 022194 204 GHSDVMAGVLAVKGER 219 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~ 219 (301)
|+ +.|+++++++.
T Consensus 221 g~---~~G~l~~~~~~ 233 (397)
T TIGR01976 221 GP---HMGILWGRPEL 233 (397)
T ss_pred CC---ceEEEEEcHHH
Confidence 54 36888887553
No 194
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.87 E-value=9.1e-21 Score=167.39 Aligned_cols=213 Identities=22% Similarity=0.193 Sum_probs=152.3
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHHhcc----CCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAALA-AVTHLL----GTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~~~~----~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.+++++.++++++.+ +.+++++| ++++. ++..+. ++| +.|++....|+++...+. .++..|++++.++.+
T Consensus 44 ~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~~ 122 (353)
T TIGR03235 44 VERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIR-ALERNGFTVTYLPVDE 122 (353)
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHH-HHHhcCCEEEEEccCC
Confidence 678999999999876 44555555 68875 444443 355 778888888888776663 345678999988864
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++++++++++|++++++||||.+.|+++|.++|+++|+++++|++++.+... +....++|+++.|++|++
T Consensus 123 ~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~ 202 (353)
T TIGR03235 123 SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIY 202 (353)
T ss_pred CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcC
Confidence 789999999888999999999999999999999999999999999999999988765 334567999999999986
Q ss_pred cCCCCceeeEEEEcchhHHH-HHHHhh-------hhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHh
Q 022194 203 AGHSDVMAGVLAVKGERLAK-ELYFLQ-------NAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~ 270 (301)
||+| .|+++.+++.... .+.... .....+.+......+..+++. .+++.+++.++.+.+++.|++
T Consensus 203 -gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 279 (353)
T TIGR03235 203 -GPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT 279 (353)
T ss_pred -CCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc
Confidence 7877 5888888653211 011100 011123333333333333333 345567777778888888865
Q ss_pred CCCc
Q 022194 271 HPRV 274 (301)
Q Consensus 271 ~~~v 274 (301)
+++
T Consensus 280 -~g~ 282 (353)
T TIGR03235 280 -LGV 282 (353)
T ss_pred -CCe
Confidence 444
No 195
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.87 E-value=9.8e-21 Score=172.05 Aligned_cols=168 Identities=18% Similarity=0.241 Sum_probs=122.0
Q ss_pred cccCC-CCch-HHHHHHHHHh-hc-C---C--CceEEecch-HHHHH-HHHh-----ccCCCCeEEEcCCCCccHHHHHh
Q 022194 48 DYTRS-GNPT-RDALESLLAK-LD-K---A--DRALCFTSG-MAALA-AVTH-----LLGTGEEIVAGDDLYGGTDRLLS 111 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~-~~-~---~--~~~i~~~sG-~~ai~-~~~~-----~~~~g~~Vlv~~~~y~~~~~~~~ 111 (301)
.|.+. |.+. ++++.+.+.+ .. + . ++.|++++| ++++. ++.+ +++|||+|++++|.|+.+.....
T Consensus 129 ~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~ 208 (527)
T PRK09275 129 NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE 208 (527)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH
Confidence 36655 6665 7777764433 22 2 1 224555555 68885 4443 68999999999999999873321
Q ss_pred hhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHH--cCCEEEEeCCcC
Q 022194 112 RVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHA--HGALLLVDNSIM 179 (301)
Q Consensus 112 ~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~--~~~~li~D~~~~ 179 (301)
....+..++.++.+ |.+++++++.+++++|++++|+||||.+.+ +++|+++|++ ++++||+||+|.
T Consensus 209 --l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~ 286 (527)
T PRK09275 209 --LPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG 286 (527)
T ss_pred --HcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh
Confidence 22345666666531 678999988899999999999999999986 7888999965 599999999997
Q ss_pred Ccccc--Ccc--CCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 180 SPVLS--RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 180 ~~~~~--~~~--~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
..... ... .....+++.||||.| |.+|+|.||++++++
T Consensus 287 ~f~~~~~s~~~~~~~~~I~v~SfSK~f-~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 287 TFVDDFRSLFAVLPYNTILVYSFSKYF-GATGWRLGVIALHED 328 (527)
T ss_pred hhcccccCHHHhCCCCEEEEeehhhhc-cCcHhHHhhhhcCch
Confidence 54321 111 124679999999999 667899999999876
No 196
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.87 E-value=8.4e-21 Score=168.70 Aligned_cols=216 Identities=25% Similarity=0.323 Sum_probs=164.6
Q ss_pred hHHHHHHHHHhhcCCCc---eEEecchHHHHH-HHHhc---cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 56 TRDALESLLAKLDKADR---ALCFTSGMAALA-AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~---~i~~~sG~~ai~-~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
..+++++.+++++|++. +++++++++++. ++..+ +++|++|++.+..|++....|....+..|+++..++.+
T Consensus 44 ~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~ 123 (371)
T PF00266_consen 44 ILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADP 123 (371)
T ss_dssp HHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGT
T ss_pred HHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhccccccc
Confidence 37889999999999874 455666678886 44555 68999999999999999888888888899999888753
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++.+++++++|++++..|.+|...|+++|.++||++|+++++|.+++.+... +....++|++++|.+| +
T Consensus 124 ~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K-l 202 (371)
T PF00266_consen 124 GGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK-L 202 (371)
T ss_dssp TSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS-T
T ss_pred cchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccceeeecccc-c
Confidence 789999999999999999999999999999999999999999999999999998875 4556789999999999 8
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhh---------------------hcCCCCCHHhHHHHHcccccH-----HHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQN---------------------AEGSGLAPFDCWICLRGVKTM-----ALRVEK 256 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~-----~~~~~~ 256 (301)
+||+|+ |+++.+++.+ +++..... ....+.+....+.+..+++.+ +...++
T Consensus 203 ~gp~G~--g~l~v~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~ 279 (371)
T PF00266_consen 203 GGPPGL--GFLYVRPEAI-ERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRER 279 (371)
T ss_dssp TSSSTE--EEEEEEHHHH-HHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCch--hhheehhhhh-hccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhh
Confidence 799884 9999887543 33321100 011233443344444444432 344566
Q ss_pred HHHHHHHHHHHHHhCCCcc
Q 022194 257 QQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v~ 275 (301)
..+..+++.+.|++.+.+.
T Consensus 280 ~~~l~~~~~~~l~~~~~~~ 298 (371)
T PF00266_consen 280 IRELAEYLREALEELPGIE 298 (371)
T ss_dssp HHHHHHHHHHHHHHTTTEE
T ss_pred hhhHHHHHHhhhhcCCcee
Confidence 7777888888888877653
No 197
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=2.6e-20 Score=160.90 Aligned_cols=211 Identities=19% Similarity=0.234 Sum_probs=166.9
Q ss_pred hHHHHHHHHHhhcCCC--ceEEe-cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 56 TRDALESLLAKLDKAD--RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~-~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
...++.+.+...++.+ +++++ +|||.++. ++..+++|||+||+.....++.. |..+++.+|.+++.+...
T Consensus 39 ~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~~ 116 (383)
T COG0075 39 IMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGEA 116 (383)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCCC
Confidence 3778888899999877 44444 77788884 78889999999998877666553 568999999999988865
Q ss_pred -CHHHHHhhcC--CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccccc
Q 022194 128 -DLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 -d~~~l~~~l~--~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (301)
|+++++++++ ++.++|.+++..++||...|+++|+++||+||.++|+|.+-+.|... ...++|+|+++.+.+|+++
T Consensus 117 v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~ 196 (383)
T COG0075 117 VDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALG 196 (383)
T ss_pred CCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhcc
Confidence 8999999998 46889999999999999999999999999999999999999977654 7788999999999999999
Q ss_pred CCCCceeeEEEEcchhHHHH---------------HHHhhh--hcCCCCCHHhHHHHHccccc-----HHHHHHHHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAKE---------------LYFLQN--AEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNA 261 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~---------------~~~~~~--~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~ 261 (301)
+|||+ +++..+++.+... .+.+.. .+..+.+....+++..+++. ++.+.+++..++
T Consensus 197 ~PPGl--a~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~ 274 (383)
T COG0075 197 APPGL--AFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLA 274 (383)
T ss_pred CCCcc--ceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99995 8888876544221 111111 22344455555555556554 466788888999
Q ss_pred HHHHHHHHh
Q 022194 262 QKIAEFLAS 270 (301)
Q Consensus 262 ~~l~~~l~~ 270 (301)
+.+++.++.
T Consensus 275 ~a~r~~~~a 283 (383)
T COG0075 275 EALRAGLEA 283 (383)
T ss_pred HHHHHHHHH
Confidence 999999885
No 198
>PLN02721 threonine aldolase
Probab=99.87 E-value=1.7e-20 Score=165.68 Aligned_cols=215 Identities=23% Similarity=0.250 Sum_probs=149.3
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccC-CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLG-TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~-~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
+...++++.++++++.+..+++++|++++. ++..+++ +||+|++++|+|....... ..+...|.+++.++.+
T Consensus 40 ~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~ 118 (353)
T PLN02721 40 PTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNEDGTM 118 (353)
T ss_pred HHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcCCCc
Confidence 458899999999999988899999986654 5555676 9999999999986554210 1456678888888753
Q ss_pred CHHHHHhhcC-------CCceEEEEeCC-CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc---c-Cc--cCCC
Q 022194 128 DLDEVASAIG-------PWTKLVWVESP-TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL---S-RP--LELG 190 (301)
Q Consensus 128 d~~~l~~~l~-------~~~~~v~i~~~-~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~---~-~~--~~~~ 190 (301)
|++.+++.++ +++++|+++++ +||+|.+.+ +++|.++|+++|+++|+|++|..+.. . .+ ...+
T Consensus 119 d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~ 198 (353)
T PLN02721 119 DLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKA 198 (353)
T ss_pred CHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhh
Confidence 7899999987 57899999875 678898865 78999999999999999999764321 1 11 1236
Q ss_pred CcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCH--HhHHHHHcccccHHHHHHHHHHHHHHHHHHH
Q 022194 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP--FDCWICLRGVKTMALRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l 268 (301)
+|.++.|+||+++++ .+++++.+ +.+.+.+.......+..... ..+.+...+++...++.++..++++.+.+.|
T Consensus 199 ~d~~~~s~sK~l~~~---~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L 274 (353)
T PLN02721 199 ADSVSVCLSKGLGAP---VGSVIVGS-KSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGL 274 (353)
T ss_pred CCEEEEecccccCCc---eeeEEecC-HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999654 23445544 55555544444433322221 1222233344443344455567778899999
Q ss_pred HhCCCc
Q 022194 269 ASHPRV 274 (301)
Q Consensus 269 ~~~~~v 274 (301)
++++++
T Consensus 275 ~~~~~~ 280 (353)
T PLN02721 275 NQIKGL 280 (353)
T ss_pred HhCCCc
Confidence 887665
No 199
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.87 E-value=2.5e-20 Score=161.27 Aligned_cols=211 Identities=25% Similarity=0.278 Sum_probs=172.5
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh--ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTH--LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~--~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...++++.+++++|++.++.++|||.|+.+.+. -++|||+|+++..+|-.+. +.....|.+++.++.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATa----n~i~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATA----NAVLLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHH----HHHHHcCCeEEEEecCCccc
Confidence 46689999999999999999999999999975444 3789999999999998886 6666789999999976
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEeccc--cc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KF 201 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~S~s--K~ 201 (301)
|++.+|+++.+++++|+ |-.-.|...++++|.++|++||++||+|.+++.|........| .|+.++||+ |.
T Consensus 109 nid~~~ie~aIt~~tKAIi---pVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ 185 (374)
T COG0399 109 NIDPDLIEAAITPRTKAII---PVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKN 185 (374)
T ss_pred CCCHHHHHHHcccCCeEEE---EehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCC
Confidence 89999999999999999 4455788899999999999999999999999988765444444 478888875 88
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhcC----------------CCCCHHhHHHHHcccccHHHHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEG----------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIA 265 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 265 (301)
+... -+|+++++++++.++.+.+....- .-++..+++..+..|+.+++..++..+.++.+.
T Consensus 186 ittg---EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~ 262 (374)
T COG0399 186 LTTG---EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYA 262 (374)
T ss_pred cccc---CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8543 479999999998887765543211 234556677778888888888889999999999
Q ss_pred HHHHhCCCc
Q 022194 266 EFLASHPRV 274 (301)
Q Consensus 266 ~~l~~~~~v 274 (301)
+.|++.+.+
T Consensus 263 ~~l~~~~~~ 271 (374)
T COG0399 263 EALKGLPGI 271 (374)
T ss_pred HHhhcCCCc
Confidence 999987653
No 200
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.87 E-value=7.4e-20 Score=162.57 Aligned_cols=208 Identities=16% Similarity=0.115 Sum_probs=158.5
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHHH-HHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~-~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
+.+++++++++++++.+++++++||++|+.+ +..+ +++||+|+++.+.|.++. ..+...|++++.++.+
T Consensus 31 ~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~----~~~~~~G~~~v~~d~d~~~~~ 106 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA----NAFVLRGAKIVFVDIRPDTMN 106 (375)
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHH----HHHHHcCCEEEEEecCCCcCC
Confidence 4589999999999999999999999999864 4444 789999999999999886 4456778999888753
Q ss_pred -CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC--ccCCCCcEEEeccc--ccc
Q 022194 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR--PLELGADIVMHSAT--KFI 202 (301)
Q Consensus 128 -d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~--~~~~~~di~~~S~s--K~~ 202 (301)
|++++++++++++++|+++ |++|...++++|.++|+++|+++|+|++|+.+.... +.....|+.++||+ |.+
T Consensus 107 ~d~~~le~~i~~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K~l 183 (375)
T PRK11706 107 IDETLIEAAITPKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNY 183 (375)
T ss_pred cCHHHHHHhcCCCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCccc
Confidence 6899999998889999876 468999999999999999999999999998776322 22223578888877 998
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhh-------------------cC--CCCCHHhHHHHHcccccHHHHHHHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNA-------------------EG--SGLAPFDCWICLRGVKTMALRVEKQQDNA 261 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~-------------------~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 261 (301)
+. |. +|.++.+++.+.+++...... .+ .-++...++.....++.+++..++..++.
T Consensus 184 ~~--g~-gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~ 260 (375)
T PRK11706 184 TA--GE-GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLALW 260 (375)
T ss_pred cc--cC-CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 32 466667777777665544421 11 11244555556666777777778888888
Q ss_pred HHHHHHHHhCC
Q 022194 262 QKIAEFLASHP 272 (301)
Q Consensus 262 ~~l~~~l~~~~ 272 (301)
+++.+.|.+.+
T Consensus 261 ~~~~~~L~~~~ 271 (375)
T PRK11706 261 QRYYDALAPLA 271 (375)
T ss_pred HHHHHHhcCCC
Confidence 88888887765
No 201
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.87 E-value=2.2e-20 Score=165.59 Aligned_cols=211 Identities=18% Similarity=0.175 Sum_probs=152.0
Q ss_pred hHHHHHHHHHhhcCCCc----eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 56 TRDALESLLAKLDKADR----ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~----~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
..+++++.++++++++. +++++|||+++. ++.+++.+||++++..+.+++.. +...++..|.+++.++.+
T Consensus 36 ~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~~ 113 (363)
T TIGR02326 36 VVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEVE 113 (363)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCCC
Confidence 37788999999999852 445566789986 55677788888777666555442 235567788888877754
Q ss_pred --CHHHHHhhcCC--CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 --DLDEVASAIGP--WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 --d~~~l~~~l~~--~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|+++++++++. ++++|.+++++||||...|+++|.++||++|+++++|++++.+..+ +....++|++++|+||++
T Consensus 114 ~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l 193 (363)
T TIGR02326 114 PPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCI 193 (363)
T ss_pred CCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCcccc
Confidence 78999998874 4577889999999999999999999999999999999999877654 344568999999999999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHH---------------hh---hhcCCCCCHHhHHHHHccccc------HHHHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYF---------------LQ---NAEGSGLAPFDCWICLRGVKT------MALRVEKQQ 258 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~ 258 (301)
+||+|+ |+++.+++.+.+ +.. .. .....+.+.....++.++++. ++++.+++.
T Consensus 194 ~~p~G~--G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 270 (363)
T TIGR02326 194 QGVPGF--GFVIARQAELAA-CKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQ 270 (363)
T ss_pred ccCCcc--eEEEECHHHHHH-hhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 888874 999888664432 211 00 001123344444443333332 345667788
Q ss_pred HHHHHHHHHHHhC
Q 022194 259 DNAQKIAEFLASH 271 (301)
Q Consensus 259 ~~~~~l~~~l~~~ 271 (301)
+++.++.+.|+++
T Consensus 271 ~~~~~l~~~L~~~ 283 (363)
T TIGR02326 271 QNQKTLVAGMRAL 283 (363)
T ss_pred HHHHHHHHHHHHc
Confidence 8888899988765
No 202
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.87 E-value=1.3e-20 Score=167.93 Aligned_cols=215 Identities=19% Similarity=0.163 Sum_probs=151.3
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc---CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL---GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~---~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
.+++++.+++++|.+ +++++++|++++. ++..++ .++++|+++...|+++...+... +..|++++.++.+
T Consensus 44 ~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~g 122 (379)
T TIGR03402 44 VEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHL-EKQGYKVTYLPVDEEG 122 (379)
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHH-HHcCCEEEEEccCCCC
Confidence 678889999999976 3555666688875 444432 45789999999998887666433 4578899888753
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccC
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (301)
|++++++.++++++++++++++|+||...|+++|.++|+++|+++++|++++.+... +....++|+++.|.+|+ .|
T Consensus 123 ~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~-~g 201 (379)
T TIGR03402 123 RLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKL-HG 201 (379)
T ss_pred cCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHc-CC
Confidence 789999999989999999999999999999999999999999999999999988654 34456899999999995 58
Q ss_pred CCCceeeEEEEcchhHHHHHHH---hh-hhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 022194 205 HSDVMAGVLAVKGERLAKELYF---LQ-NAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRVK 275 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~-~~~v~ 275 (301)
|+| .|+++.+++........ .. .....+.+......+..+++. +++..++..++.+++.+.|++ ++++.
T Consensus 202 p~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~ 279 (379)
T TIGR03402 202 PKG--VGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDAR 279 (379)
T ss_pred CCc--eEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 888 47887775431110000 00 011123333333333333333 333445566666777777764 66553
No 203
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.87 E-value=1.3e-20 Score=166.73 Aligned_cols=215 Identities=23% Similarity=0.252 Sum_probs=165.1
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHHHHHhc--cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~--~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+..+++++.+++++|.+.++.++|||.|+.+++.. +++||+|+++..++..+. ..+...|.++++++.+
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~----~ai~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATA----SAILWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHH----HHHHHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHH----HHHHHhccEEEEEeccCCcC
Confidence 467999999999999999999999999999755444 569999999999999886 6667889999999965
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCcc--CCCCcEEEeccc--cc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSAT--KF 201 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~--~~~~di~~~S~s--K~ 201 (301)
|++.+++++.+++++|++.+ ..|...++++|.++|+++|+++|+|.+++.|...... ..-.|+.++||+ |.
T Consensus 100 ~id~~~~~~~i~~~t~ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K~ 176 (363)
T PF01041_consen 100 NIDPEALEKAITPKTKAILVVH---LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTKI 176 (363)
T ss_dssp SB-HHHHHHHHHTTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTSS
T ss_pred CcCHHHHHHHhccCccEEEEec---CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCCC
Confidence 89999999999999999654 4577789999999999999999999999988754332 223499999985 88
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhc-----------------CCCCCHHhHHHHHcccccHHHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAE-----------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 264 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 264 (301)
+..+ -+|+++++++.+.++++.+.... ..-++...++..+..++.+.+..++..++++.+
T Consensus 177 i~~g---eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y 253 (363)
T PF01041_consen 177 ITTG---EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRY 253 (363)
T ss_dssp S-SS---S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CcCC---CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 8543 37999999998888776654321 123577778888888999999999999999999
Q ss_pred HHHHHhCCCcceEe
Q 022194 265 AEFLASHPRVKKVN 278 (301)
Q Consensus 265 ~~~l~~~~~v~~v~ 278 (301)
.+.|.+.+.+..+.
T Consensus 254 ~~~L~~~~~~~~~~ 267 (363)
T PF01041_consen 254 REALAGIPGIKPPP 267 (363)
T ss_dssp HHHHTTGTTEEEEG
T ss_pred HHHHhcCCCccccc
Confidence 99999988764433
No 204
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=4.3e-20 Score=165.92 Aligned_cols=206 Identities=24% Similarity=0.227 Sum_probs=142.3
Q ss_pred HHHHHHhhcCCCce-EEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHh-hhcccCCcEEEEecC--C------C
Q 022194 60 LESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS-RVTPKTGVVVKRVNT--C------D 128 (301)
Q Consensus 60 l~~~l~~~~~~~~~-i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~-~~~~~~g~~~~~~~~--~------d 128 (301)
.++.+++++|.+.. +++++|++++. ++..++++||+|++++|.|.++...+. ..++..|.++..++. + |
T Consensus 70 ~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id 149 (402)
T cd00378 70 AIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLID 149 (402)
T ss_pred HHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcC
Confidence 44567788998754 55578898885 677789999999999999987743211 124556765554432 2 7
Q ss_pred HHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc-----cCccCCCCcEEEecccccc
Q 022194 129 LDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFI 202 (301)
Q Consensus 129 ~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~di~~~S~sK~~ 202 (301)
++++++.+. .++++|++++++|| ...++++|+++|+++|+++|+|++|..+.. ..+.. +.|++++|+||++
T Consensus 150 ~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l 226 (402)
T cd00378 150 YDALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTL 226 (402)
T ss_pred HHHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCC
Confidence 999999885 67899998888764 567999999999999999999999754432 22233 6799999999998
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhhcCCC-CCHHhHHH----HHcccc-cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-LAPFDCWI----CLRGVK-TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~l~-~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.|+ ++|+++++++.+.+.+.........+ .......+ +..... ...++++++.++++++.+.|+++
T Consensus 227 ~G~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 298 (402)
T cd00378 227 RGP---RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER 298 (402)
T ss_pred CCC---CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 554 57888887756666554433211111 11112211 122222 34566788888999999999875
No 205
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=2.7e-20 Score=167.94 Aligned_cols=205 Identities=23% Similarity=0.190 Sum_probs=142.3
Q ss_pred HHHHHhhcCCCce-EEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHh-hhcccCCcEEEEecCC------CHHH
Q 022194 61 ESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS-RVTPKTGVVVKRVNTC------DLDE 131 (301)
Q Consensus 61 ~~~l~~~~~~~~~-i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~-~~~~~~g~~~~~~~~~------d~~~ 131 (301)
++.+++++|.+.. +++++|++++. ++..++++||+|+++.+.|.++...+. ......|.+++.++.+ |+++
T Consensus 77 ~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 156 (416)
T PRK00011 77 IDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDE 156 (416)
T ss_pred HHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHH
Confidence 3488999998855 66678998885 666788999999999999976532111 1123445666666542 7899
Q ss_pred HHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc-----cCccCCCCcEEEecccccccCC
Q 022194 132 VASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGH 205 (301)
Q Consensus 132 l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~di~~~S~sK~~~g~ 205 (301)
+++++++ ++++|+++.+.+ |...|+++|.++|+++|+++|+|++|..+.. ..... +.|++++|+||+++|+
T Consensus 157 l~~~i~~~~~k~v~~~~~~~--~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l~g~ 233 (416)
T PRK00011 157 VEKLALEHKPKLIIAGASAY--SRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTLRGP 233 (416)
T ss_pred HHHHHHhcCCCEEEECCCcC--CCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCCCCC
Confidence 9999864 789888875544 5677999999999999999999999875543 22333 6899999999998655
Q ss_pred CCceeeEEEEcchhHHHHHHHhhhhcCC-CCCHHhHHH----HHcccc-cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 206 SDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWI----CLRGVK-TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 206 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~l~-~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++|+++++++.+.+.+......... +.......+ ....++ .+.++.+++.++++++.+.|++.
T Consensus 234 ---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 302 (416)
T PRK00011 234 ---RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER 302 (416)
T ss_pred ---CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 5789998766666665544332211 111111111 112122 34667788999999999999875
No 206
>PRK14012 cysteine desulfurase; Provisional
Probab=99.86 E-value=1.5e-20 Score=168.89 Aligned_cols=215 Identities=18% Similarity=0.162 Sum_probs=152.1
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecchHHHHHH-HHhc----cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~-~~~~----~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
..+++++.+++++|.+ +++++++|++++.. +..+ .++||+|+++++.|+++...+.. ++..|++++.++.+
T Consensus 50 ~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~-~~~~g~~~~~v~~~~ 128 (404)
T PRK14012 50 AVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTYLDPQS 128 (404)
T ss_pred HHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHH-HHhCCCEEEEEccCC
Confidence 3778899999999986 36666777888753 3333 47899999999999888765533 34568888888754
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++++++++++|++++++|+||.+.|+++|.++|+++|+++|+|++++.+... +....++|++++|++|.+
T Consensus 129 ~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~ 208 (404)
T PRK14012 129 NGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIY 208 (404)
T ss_pred CCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhcc
Confidence 789999999999999999999999999999999999999999999999999988764 444567999999999977
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhh-------hcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQN-------AEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
||+| .|+++.+++...+ +..... ....+.+.........+++ ...+..++..+.++++.+.|+++
T Consensus 209 -gp~g--~G~l~~~~~~~~~-~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~ 284 (404)
T PRK14012 209 -GPKG--IGALYVRRKPRVR-LEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDI 284 (404)
T ss_pred -CCCc--eEEEEEecCCCCC-CCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 6665 4776666543221 111000 0011112222111112222 23444566677777888888777
Q ss_pred CCcc
Q 022194 272 PRVK 275 (301)
Q Consensus 272 ~~v~ 275 (301)
+++.
T Consensus 285 ~~i~ 288 (404)
T PRK14012 285 EEVY 288 (404)
T ss_pred CCEE
Confidence 7653
No 207
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.86 E-value=1.3e-20 Score=168.16 Aligned_cols=215 Identities=18% Similarity=0.121 Sum_probs=146.8
Q ss_pred HHHHHHHhhcCC--CceEE-ecchHHHHHHHHh-c-----cCC-CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 59 ALESLLAKLDKA--DRALC-FTSGMAALAAVTH-L-----LGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 59 ~l~~~l~~~~~~--~~~i~-~~sG~~ai~~~~~-~-----~~~-g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
+.++.+.+.+++ ++.++ ++++++++..++. + .++ +++|+++...|+++...+. .++..|++++.++.+
T Consensus 46 ~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-~~~~~G~~v~~v~~~~ 124 (382)
T TIGR03403 46 EALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCA-FLESLGVEVTYLPINE 124 (382)
T ss_pred HHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHH-HHHHCCCEEEEEecCC
Confidence 333344444553 24454 4555688864433 3 245 4689999999988876663 456789999998864
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|+++++++++++++++++++++||||.+.|+++|.++|+++|+++++|++++.+... +....++|+++.|+||++
T Consensus 125 ~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~ 204 (382)
T TIGR03403 125 QGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFH 204 (382)
T ss_pred CCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhC
Confidence 789999999988999999999999999999999999999999999999999877654 444568999999999986
Q ss_pred cCCCCceeeEEEEcchhHHHH-HHH---hhhhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 203 AGHSDVMAGVLAVKGERLAKE-LYF---LQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
||+|+ |+++.++...... +.. .......+.+.....++..+++. ++...++..+.++++.+.|++++++
T Consensus 205 -gp~G~--g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~ 281 (382)
T TIGR03403 205 -GPKGV--GGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDV 281 (382)
T ss_pred -CCCce--EEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 78874 7777664421110 000 00011233444444344344332 3444456667777888888777766
Q ss_pred ceE
Q 022194 275 KKV 277 (301)
Q Consensus 275 ~~v 277 (301)
..+
T Consensus 282 ~~~ 284 (382)
T TIGR03403 282 FVV 284 (382)
T ss_pred EEE
Confidence 433
No 208
>PRK07908 hypothetical protein; Provisional
Probab=99.86 E-value=2e-20 Score=164.87 Aligned_cols=200 Identities=16% Similarity=0.145 Sum_probs=139.8
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CH
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL 129 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~ 129 (301)
..++++.++++++.+ +.+++++| ++++..+.. ++++ .+++..|.|..+. ..++..|.+++.++.+ |+
T Consensus 60 ~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~-l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~~~~~~~~d~ 133 (349)
T PRK07908 60 ERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR-LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVVLDPPFRLDP 133 (349)
T ss_pred hHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeeccCcccCcCh
Confidence 566777777777755 56666666 588876666 6774 5677889998775 5556788999888765 23
Q ss_pred HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc---Cc--cCCCCcEEEecccccccC
Q 022194 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---RP--LELGADIVMHSATKFIAG 204 (301)
Q Consensus 130 ~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~---~~--~~~~~di~~~S~sK~~~g 204 (301)
+ .+.++++++++++|+||||.+.+.++|.++|++ +.++|+||+|+..... .. ......+++.||||.+ +
T Consensus 134 ~----~l~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~-~ 207 (349)
T PRK07908 134 A----AVPDDADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTW-S 207 (349)
T ss_pred h----HhccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeeccccc-C
Confidence 3 345678999999999999999999999999975 7889999998643211 11 1224568999999999 6
Q ss_pred CCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc-----cccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG-----VKTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+|+|.|++++++ .+.+.+...... +..++....++... .+.+.+.++++.++++.+.+.|+++
T Consensus 208 l~GlRiG~~~~~~-~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 276 (349)
T PRK07908 208 LAGLRVGYALGAP-DVLARLTRGRAH--WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV 276 (349)
T ss_pred CccceeeeeecCH-HHHHHHHhcCCC--CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6789999999864 455554443322 33333333332222 2345556677788888888888875
No 209
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.86 E-value=5.3e-20 Score=166.40 Aligned_cols=210 Identities=19% Similarity=0.158 Sum_probs=150.1
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC------
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------ 126 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~------ 126 (301)
.+...+|++.++++++.++++++++|++|+. ++..+++||| |++++|.|..+. ......|.+++.++.
T Consensus 77 ~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~----~~i~~~G~~~v~v~~~~~~~~ 151 (460)
T PRK13238 77 SRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTR----AHIELNGATAVDLVIDEALDT 151 (460)
T ss_pred CCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchH----HHHHHcCCEEEEEeccccccc
Confidence 3457889999999999999988899999985 6677899999 999999888885 444567777777764
Q ss_pred ---------CCHHHHHhhcC----CCceEEEEeCCCCCcc-ccc---cHHHHHHHHHHcCCEEEEeCCcCCc-c------
Q 022194 127 ---------CDLDEVASAIG----PWTKLVWVESPTNPRQ-QIC---DIRKIAEMAHAHGALLLVDNSIMSP-V------ 182 (301)
Q Consensus 127 ---------~d~~~l~~~l~----~~~~~v~i~~~~np~G-~~~---~l~~l~~l~~~~~~~li~D~~~~~~-~------ 182 (301)
.|++++++.+. +++++|++++|+||+| .+. ++++|+++|++||+++|+|+++... .
T Consensus 152 ~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~ 231 (460)
T PRK13238 152 GSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQR 231 (460)
T ss_pred cccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhc
Confidence 26889999987 3699999999999998 555 4789999999999999999987431 1
Q ss_pred ----ccCcc-------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh-----cCCCCCHHhHHHHHcc
Q 022194 183 ----LSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-----EGSGLAPFDCWICLRG 246 (301)
Q Consensus 183 ----~~~~~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 246 (301)
..... ....|+++.|.+|...+| .+|+++++++.+.+.++..... ...+.+...+.++..+
T Consensus 232 e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~ 308 (460)
T PRK13238 232 EPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVG 308 (460)
T ss_pred cccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhh
Confidence 11110 124789999999987665 3688888876777766554311 1122333323444334
Q ss_pred ccc-H-HHHHHHHHHHHHHHHHHHHhC
Q 022194 247 VKT-M-ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 247 l~~-~-~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++. + .+..+...+++++|.+.|++.
T Consensus 309 l~e~~~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 309 LYEGMDEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHC
Confidence 332 1 234445555678888988764
No 210
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.86 E-value=2.3e-20 Score=166.38 Aligned_cols=253 Identities=18% Similarity=0.146 Sum_probs=163.0
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||.++ ++|+|. ++|.+.......-.. .......+..+...+++++++++++.+++++++||++++.+++.
T Consensus 27 ~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~---~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~ 102 (379)
T TIGR00707 27 KEYLDFVAGIAVNSLGH-AHPKLVEALKEQLEK---LVHVSNLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALK 102 (379)
T ss_pred CEEEEcCcchhhccCCC-CCHHHHHHHHHHHhh---ccccccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHH
Confidence 478999844 789998 455555443222111 11111122345699999999999999988899999988864434
Q ss_pred cc----C----CCCeEEEcCCCCccHHHHHhhhc---------ccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 89 LL----G----TGEEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 89 ~~----~----~g~~Vlv~~~~y~~~~~~~~~~~---------~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
++ . ++|+|+++++.||++........ .....++..++..|++.+++.+.+++++|++++++++
T Consensus 103 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~ 182 (379)
T TIGR00707 103 LARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGE 182 (379)
T ss_pred HHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccC
Confidence 32 2 37999999999988753321111 0111233344445899999999888999999877777
Q ss_pred ccccc----cHHHHHHHHHHcCCEEEEeCCcCCcccc-C--c-cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 152 RQQIC----DIRKIAEMAHAHGALLLVDNSIMSPVLS-R--P-LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 152 ~G~~~----~l~~l~~l~~~~~~~li~D~~~~~~~~~-~--~-~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
+|... ++++|.++|+++|+++|+||+|...... . + ...+.+..+.++||.++ +|++.|++++++ .+.+.
T Consensus 183 ~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~--~G~riG~~~~~~-~~~~~ 259 (379)
T TIGR00707 183 GGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAKGLG--GGVPIGATLAKE-EVAEA 259 (379)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEccccc--CCcccEEEEEcH-HHHhh
Confidence 77643 3899999999999999999998732121 1 1 11122222347899995 568899999874 45554
Q ss_pred HHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 224 LYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.........+.++..+.++..+++.+ .+..+++.++.+.+++.|++
T Consensus 260 ~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (379)
T TIGR00707 260 FTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEE 308 (379)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 443323333445666666666555543 23556667777777777765
No 211
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.86 E-value=4.5e-20 Score=167.55 Aligned_cols=167 Identities=20% Similarity=0.250 Sum_probs=119.7
Q ss_pred cc-CCCC-chHHHHH-HHHHhhcC----CCc--eEEecch-HHHHH-HHHh-----ccCCCCeEEEcCCCCccHHHHHhh
Q 022194 49 YT-RSGN-PTRDALE-SLLAKLDK----ADR--ALCFTSG-MAALA-AVTH-----LLGTGEEIVAGDDLYGGTDRLLSR 112 (301)
Q Consensus 49 y~-~~g~-~~~~~l~-~~l~~~~~----~~~--~i~~~sG-~~ai~-~~~~-----~~~~g~~Vlv~~~~y~~~~~~~~~ 112 (301)
|. +.|. +.++++. +++.+..+ .++ .+++++| ++|+. ++.+ +++|||+|++++|.|+.+.....
T Consensus 124 Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~- 202 (521)
T TIGR03801 124 YPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE- 202 (521)
T ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH-
Confidence 53 3344 4466655 45555432 222 4555555 68885 4444 68999999999999999874321
Q ss_pred hcccCCcEEEEecCC------------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHc--CCEEEEe
Q 022194 113 VTPKTGVVVKRVNTC------------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAH--GALLLVD 175 (301)
Q Consensus 113 ~~~~~g~~~~~~~~~------------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~--~~~li~D 175 (301)
....|.+++.++.+ |.+++++++++++++|++++|+||||.+.+ +++|+++|+++ +++||+|
T Consensus 203 -l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~D 281 (521)
T TIGR03801 203 -LPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTD 281 (521)
T ss_pred -HhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEEC
Confidence 23346666666532 567888888889999999999999999986 78889999986 8999999
Q ss_pred CCcCCcccc--Ccc--CCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 176 NSIMSPVLS--RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 176 ~~~~~~~~~--~~~--~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
|+|+..... ... .....+++.|+||.| |.+|+|.|+++++++
T Consensus 282 EvY~~f~~~~~sl~~~~~~~vI~v~SfSK~f-g~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 282 DVYGTFVDDFRSLFAELPYNTIGVYSFSKYF-GATGWRLGTIALHKD 327 (521)
T ss_pred CCchhhcccccchhhhCCCCEEEEEcchhhc-cCchhhhhhhhcCch
Confidence 999754321 111 123679999999999 667899999999865
No 212
>PRK08637 hypothetical protein; Provisional
Probab=99.86 E-value=1.9e-19 Score=160.84 Aligned_cols=223 Identities=15% Similarity=0.156 Sum_probs=142.8
Q ss_pred CCccccCC-CCch-HHHHHHHHHhhc---CCC--ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcc
Q 022194 45 GPYDYTRS-GNPT-RDALESLLAKLD---KAD--RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 45 ~~~~y~~~-g~~~-~~~l~~~l~~~~---~~~--~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
..+.|++. |.+. ++.+.+++.+.. ..+ +.+++++| ++++. ++..++++||+|++++|.|+.+...+ ..
T Consensus 36 ~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~---~~ 112 (388)
T PRK08637 36 EIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTF---NT 112 (388)
T ss_pred cccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHH---HH
Confidence 44567765 7665 677776665543 222 34566666 58886 55667899999999999999996322 23
Q ss_pred cCCcEEEEecC--C----CHHHHHhhcC----CCceEEEEeCCCCCcccccc---HHHHHHHHHH-----cCCEEEEeCC
Q 022194 116 KTGVVVKRVNT--C----DLDEVASAIG----PWTKLVWVESPTNPRQQICD---IRKIAEMAHA-----HGALLLVDNS 177 (301)
Q Consensus 116 ~~g~~~~~~~~--~----d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~-----~~~~li~D~~ 177 (301)
..|.+++.++. + |++++++.++ +...++++++||||||.+.+ +++|+++|++ ++++||+||+
T Consensus 113 ~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~ 192 (388)
T PRK08637 113 RRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDA 192 (388)
T ss_pred hcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEeccc
Confidence 46788888775 2 6888888876 45566778899999999975 6777887765 8999999999
Q ss_pred cCCccccC--------c--cCCCCc--EEEecccccccCCCCceeeEEEEcc-----hhHHHHHHHh----hhhcCCCCC
Q 022194 178 IMSPVLSR--------P--LELGAD--IVMHSATKFIAGHSDVMAGVLAVKG-----ERLAKELYFL----QNAEGSGLA 236 (301)
Q Consensus 178 ~~~~~~~~--------~--~~~~~d--i~~~S~sK~~~g~~g~~~g~~~~~~-----~~~~~~~~~~----~~~~~~~~~ 236 (301)
|....+.. . ...+.. +++.|+||.+ +.+|+|.||++.+. +.+.+.+... ........+
T Consensus 193 Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~-~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s 271 (388)
T PRK08637 193 YFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEE-FVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGP 271 (388)
T ss_pred chhcccCCccchhhHHHhhcccccceEEEeccccccC-CCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCC
Confidence 87543321 0 111233 3456999998 56789999998653 4555544321 111222344
Q ss_pred HHhHHHHHccccc--H----HHHHHHHHHHHHHHHHHHHhC
Q 022194 237 PFDCWICLRGVKT--M----ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 237 ~~~~~~~~~~l~~--~----~~~~~~~~~~~~~l~~~l~~~ 271 (301)
...+.++...+.. + .+.+..+.++.+.+.+.|+++
T Consensus 272 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~ 312 (388)
T PRK08637 272 HPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDG 312 (388)
T ss_pred cHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4454454444432 2 222334555555666777654
No 213
>PRK07505 hypothetical protein; Provisional
Probab=99.86 E-value=4.3e-20 Score=165.74 Aligned_cols=250 Identities=16% Similarity=0.146 Sum_probs=161.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccC--CCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR--SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||+ +++|+|+.++|.+..+...+.+.........++ ...+..+++++.++++++. +.+++++|++|...++.
T Consensus 46 ~~~ld~~-s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~ 123 (402)
T PRK07505 46 HTFVNFV-SCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILP 123 (402)
T ss_pred ceEEEee-cCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHH
Confidence 4799999 689999888888877653332211100111111 2344589999999999988 78889999877753332
Q ss_pred c-----cCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 022194 89 L-----LGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 89 ~-----~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
+ ..++ ..|++.+..||+.......... .+..++.++..|++++++++.+++++++++.|+||+|.+.++++|.
T Consensus 124 ~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~ 202 (402)
T PRK07505 124 LLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELL 202 (402)
T ss_pred HHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHH
Confidence 2 2223 2466777777765422222232 3568888888899999999887788999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCcccc------C---cc--CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc
Q 022194 163 EMAHAHGALLLVDNSIMSPVLS------R---PL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 231 (301)
Q Consensus 163 ~l~~~~~~~li~D~~~~~~~~~------~---~~--~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~ 231 (301)
++|+++|+++|+||+|+.+.+. . .. ....++++.|++|.++++ +|+++..++.+.+.+......+
T Consensus 203 ~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~ 278 (402)
T PRK07505 203 RLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS----GGVIMLGDAEQIELILRYAGPL 278 (402)
T ss_pred HHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc----CeEEEeCCHHHHHHHHHhCCCc
Confidence 9999999999999998542211 0 11 123468888999999643 3676665556666554433322
Q ss_pred C--CCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHHHHHH
Q 022194 232 G--SGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 232 ~--~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~ 267 (301)
. ...++..++++...++ .+.++.+++.++.+.+.+.
T Consensus 279 t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~ 321 (402)
T PRK07505 279 AFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSL 321 (402)
T ss_pred eeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 2 2344445555444433 2334445555555444443
No 214
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=1.8e-20 Score=168.17 Aligned_cols=254 Identities=20% Similarity=0.133 Sum_probs=167.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC---CceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai~~ 85 (301)
..++||.++ ++++|. ++|.+........+ . .......+..+...++++++++.++. +++++++||++|+..
T Consensus 43 ~~~lD~~s~~~~~~lG~-~~p~v~~ai~~~~~--~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~ 118 (398)
T PRK03244 43 KEYLDLLGGIAVNALGH-AHPAVVEAVTRQLA--T-LGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEA 118 (398)
T ss_pred CEEEECCcCHhhccCCC-CCHHHHHHHHHHHH--h-ccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHH
Confidence 478999743 778997 45666544322211 1 11111223455578999999999874 367777888999864
Q ss_pred HHh-ccCCC-CeEEEcCCCCccHHHHHhhhc---------ccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccc
Q 022194 86 VTH-LLGTG-EEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (301)
Q Consensus 86 ~~~-~~~~g-~~Vlv~~~~y~~~~~~~~~~~---------~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~ 154 (301)
++. +..+| ++|+..++.||++........ ...+..+..++..|++.+++.+.+++++|+++.++||+|.
T Consensus 119 al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~ 198 (398)
T PRK03244 119 AFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGV 198 (398)
T ss_pred HHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCC
Confidence 433 33344 567777889998853321111 1112345556666899999999888999999999999999
Q ss_pred ccc----HHHHHHHHHHcCCEEEEeCCcCCccc-cCc---cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHH
Q 022194 155 ICD----IRKIAEMAHAHGALLLVDNSIMSPVL-SRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 226 (301)
Q Consensus 155 ~~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~ 226 (301)
+.| +++|.++|++||+++|+||+|+.... ... ...+.+..+.+++|+++ +|++.|+++++++ +.+.+..
T Consensus 199 ~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~--~G~~ig~~~~~~~-~~~~~~~ 275 (398)
T PRK03244 199 VPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLG--GGLPIGACLAFGP-AADLLTP 275 (398)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhh--CCcccEEEEEcHH-HHhhccC
Confidence 986 89999999999999999999863211 111 11233233457899995 3578899998765 5454433
Q ss_pred hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 227 LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
.........++..+.++...++.+. +..++..+..+++++.|++.
T Consensus 276 ~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (398)
T PRK03244 276 GLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL 322 (398)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc
Confidence 2233445667777777777766442 45567777778888888873
No 215
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.86 E-value=5.7e-21 Score=160.88 Aligned_cols=243 Identities=19% Similarity=0.219 Sum_probs=171.4
Q ss_pred CCCCCCccccCeeecceeecCCCCCCCCccccCC--CCch-HHHHHHHHHhhcCCCceEEecchHHHH-HHHHhcc--CC
Q 022194 19 EFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPT-RDALESLLAKLDKADRALCFTSGMAAL-AAVTHLL--GT 92 (301)
Q Consensus 19 ~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~~~-~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~~~~--~~ 92 (301)
+|||+|++.+|.+..+.-...+ ....+-+-.+. |... -.+|+..|+++.+.+.+++|+|+.-|. +++..+. -|
T Consensus 178 SNDYLgms~Hp~V~~A~~~tl~-~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lp 256 (570)
T KOG1360|consen 178 SNDYLGMSRHPEVLDAMHDTLD-RHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLP 256 (570)
T ss_pred cCccccccCChHHHHHHHHHHH-HcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCC
Confidence 6999999999999877532211 11122233333 5544 789999999999999999999996444 3343332 24
Q ss_pred CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC----CCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 93 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 93 g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
|-+|.-....|-+.. .-++..++.-...-.+|++.|+++++ .-+++|.++..+.++|.++|++||++++++|
T Consensus 257 gcei~SD~gNHASMI----~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~y 332 (570)
T KOG1360|consen 257 GCEIFSDEGNHASMI----QGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKY 332 (570)
T ss_pred CcEEeccccchHHHH----HHhhhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHh
Confidence 555544444444333 33444555555555678888888886 3578999999999999999999999999999
Q ss_pred CCEEEEeCCcCCccccC---------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh--cCCCCCH
Q 022194 169 GALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAP 237 (301)
Q Consensus 169 ~~~li~D~~~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~ 237 (301)
|++.++||+|..|.++. ......||+.+++.|+||. .+|++.... .+.+.++..... ++.+++|
T Consensus 333 GAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc----VGGYIAat~-~LvDmiRSyAaGFIFTTSLPP 407 (570)
T KOG1360|consen 333 GAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC----VGGYIAATR-KLVDMIRSYAAGFIFTTSLPP 407 (570)
T ss_pred CceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc----ccceehhhh-hHHHHHHHhcCceEEecCCCh
Confidence 99999999998877752 1122469999999999964 478888764 566766665544 3456777
Q ss_pred HhHHHHHcccccH-----HHHHHHHHHHHHHHHHHHHhC
Q 022194 238 FDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 238 ~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.....++++.+.+ ...+++.+++.+++++.|.++
T Consensus 408 ~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~ 446 (570)
T KOG1360|consen 408 MVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL 446 (570)
T ss_pred HHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 7766666665543 345567788888999998874
No 216
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.86 E-value=1e-19 Score=163.77 Aligned_cols=209 Identities=22% Similarity=0.189 Sum_probs=163.5
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc---------cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEe
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL---------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~---------~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~ 124 (301)
+...++++.++++++.+.+++++||++++. ++..+ ++|||+|++++++|..+.. .+...|..++.+
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~----~v~~~G~~pv~v 138 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN----PIIQNGLVPVFV 138 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH----HHHHcCCEEEEE
Confidence 558899999999999999999999998875 44433 5889999999999998863 344568888877
Q ss_pred cCC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEe
Q 022194 125 NTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMH 196 (301)
Q Consensus 125 ~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~ 196 (301)
+.+ |++.+++++.+++++|+++++ .|...++++|.++|+++|+++|+|++++.|........| .|+.++
T Consensus 139 dvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~~f 215 (438)
T PRK15407 139 DVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIATL 215 (438)
T ss_pred ecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceEEE
Confidence 753 789999999889999998864 577789999999999999999999999988754332222 288899
Q ss_pred ccc--ccccCCCCceeeEEEEcchhHHHHHHHhhhh-------------------------------------cC--CCC
Q 022194 197 SAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA-------------------------------------EG--SGL 235 (301)
Q Consensus 197 S~s--K~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-------------------------------------~~--~~~ 235 (301)
||+ |.+... -+|+++++++.+.++++..... .| ..+
T Consensus 216 Sf~~~k~~~~g---eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rm 292 (438)
T PRK15407 216 SFYPAHHITMG---EGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKI 292 (438)
T ss_pred eCCCCCCcccc---CceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCc
Confidence 986 556432 2699999998887765544321 01 234
Q ss_pred CHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
+...++..+..++.+++..++..++++++.+.|.+.++
T Consensus 293 sel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 293 TDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 56667777888888999999999999999999987764
No 217
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=3e-20 Score=166.10 Aligned_cols=253 Identities=15% Similarity=0.123 Sum_probs=165.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||.++ +.++|. ++|.+..+...+.+ + .......+..+...++++.|++..+.+++++++||++|+..++.
T Consensus 31 ~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~--~-~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~ 106 (389)
T PRK01278 31 ERYLDFASGIAVNSLGH-AHPHLVEALKEQAE--K-LWHVSNLYRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIK 106 (389)
T ss_pred CEEEECCccHhhccCCC-CCHHHHHHHHHHHH--h-cCccccccCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHH
Confidence 478999743 679999 55555544322211 1 11111112456688999999998877888999999999864433
Q ss_pred c-----cCCCC----eEEEcCCCCccHHHHHhhhcccC---------CcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 89 L-----LGTGE----EIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 89 ~-----~~~g~----~Vlv~~~~y~~~~~~~~~~~~~~---------g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
+ ..+|| +|++.++.||++........... .-.+..++..|++.+++.+.+++++|+++.+++
T Consensus 107 ~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~ 186 (389)
T PRK01278 107 TARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQG 186 (389)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccC
Confidence 2 34555 89999999998864432111100 011233455689999999988899999998888
Q ss_pred Cccccc----cHHHHHHHHHHcCCEEEEeCCcCCccc-cC---ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHH
Q 022194 151 PRQQIC----DIRKIAEMAHAHGALLLVDNSIMSPVL-SR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (301)
Q Consensus 151 p~G~~~----~l~~l~~l~~~~~~~li~D~~~~~~~~-~~---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~ 222 (301)
++|... .+++|+++|++||+++|+||+|..... .. ....+.+..+.+++|.++ +|++.|+++++++ +.+
T Consensus 187 ~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~--~G~~ig~~~~~~~-~~~ 263 (389)
T PRK01278 187 EGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIG--GGFPLGACLATEE-AAK 263 (389)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhcc--CCcceEEEEEcHH-HHh
Confidence 888443 499999999999999999999873222 11 112244444668999995 4678999988754 445
Q ss_pred HHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 223 ELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
.+.........+.++..++++...++.+. +..++..++.+++++.|+.
T Consensus 264 ~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~ 313 (389)
T PRK01278 264 GMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEG 313 (389)
T ss_pred ccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 44333333445567777777767666542 2345555666666666553
No 218
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.85 E-value=8.8e-20 Score=162.03 Aligned_cols=211 Identities=17% Similarity=0.176 Sum_probs=152.7
Q ss_pred hHHHHHHHHHhhcCCC---c-eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 56 TRDALESLLAKLDKAD---R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~---~-~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
..+++++.+++++|.+ + .+++++|++++. ++.++..+||.|++..+.|++.. +...++..|++++.++.+
T Consensus 38 ~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~~ 115 (368)
T PRK13479 38 LTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGEDE 115 (368)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCCC
Confidence 4889999999999875 2 345677788885 67778889999999888776553 235567788888888764
Q ss_pred --CHHHHHhhcCC--CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 --DLDEVASAIGP--WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 --d~~~l~~~l~~--~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++.+++ ++++|++++++||||...|+++|.++|+++|+++|+|++++.+... +....+.|+++.|++|++
T Consensus 116 ~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l 195 (368)
T PRK13479 116 PPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCI 195 (368)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCcccc
Confidence 68999988863 4678999999999999999999999999999999999988776543 333457899999999999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhh-----------------hcCCCCCHHhHHHHHccccc------HHHHHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQN-----------------AEGSGLAPFDCWICLRGVKT------MALRVEKQQD 259 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~ 259 (301)
.||+|+ |+++++++.+ +.+..... ....+.+....+.+..+++. +++..+++.+
T Consensus 196 ~g~~G~--G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~ 272 (368)
T PRK13479 196 EGVPGF--GFVIARRSEL-EACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYAN 272 (368)
T ss_pred ccCCCc--eEEEECHHHH-HHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 888884 9998876543 33222110 00012333332232223222 3455677788
Q ss_pred HHHHHHHHHHhC
Q 022194 260 NAQKIAEFLASH 271 (301)
Q Consensus 260 ~~~~l~~~l~~~ 271 (301)
+++.+.+.|+++
T Consensus 273 ~~~~l~~~L~~~ 284 (368)
T PRK13479 273 NQRTLVAGMRAL 284 (368)
T ss_pred HHHHHHHHHHHc
Confidence 888888888775
No 219
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.85 E-value=2e-19 Score=152.22 Aligned_cols=218 Identities=16% Similarity=0.208 Sum_probs=162.9
Q ss_pred cccCC-CCch-HHHHHHHHHhhcC------CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDK------ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~------~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
.|.++ |.+. ++++.+.+.+.-+ ++++++++++|.|.. ++.-+..|||.-+++.|.|+++.+ .+.=+.|
T Consensus 116 ~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr---dl~~rTg 192 (471)
T KOG0256|consen 116 MFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR---DLRWRTG 192 (471)
T ss_pred hcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc---cceeccC
Confidence 46666 8777 8888888876643 346666666688886 556678999999999999999974 4445778
Q ss_pred cEEEEecCC-------CHHHHHhhcC------CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 119 VVVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~------~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
++++++... +++.+|+++. .+++.|++++|+||.|...+ +..+.+++.++++-+|+||+|+..+
T Consensus 193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 888888864 5788887775 58899999999999999976 6667788899999999999998776
Q ss_pred ccCcc-------------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc--
Q 022194 183 LSRPL-------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-- 247 (301)
Q Consensus 183 ~~~~~-------------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-- 247 (301)
+.... .....-++.|+||-| |.||+|.|.++..++.+......+...... ++..++.+..-+
T Consensus 273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~-GlpGfRvGviYS~ne~VvsaA~kmssf~~v--Ss~tQ~~la~LLSD 349 (471)
T KOG0256|consen 273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDF-GLPGFRVGVIYSNNEDVVSAATKMSSFGLV--SSQTQYLLASLLSD 349 (471)
T ss_pred cCccCceEHHHHhhccccCCCcEEEEEEecccc-CCCceEEEEEEecChHHHHHHHHHhhccCC--cHHHHHHHHHHhch
Confidence 65321 223457889999999 778999999999998887766666554442 333333322221
Q ss_pred cc-----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 248 KT-----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 248 ~~-----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++ +.+..+++..+.+++.+.|++.
T Consensus 350 ~~f~~~yl~en~~Rl~~rh~~~~~gLk~l 378 (471)
T KOG0256|consen 350 EEFTREYLRENNKRLRIRHRYIVEGLKAL 378 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHhc
Confidence 22 3566677888888888888874
No 220
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.85 E-value=6.8e-20 Score=164.46 Aligned_cols=164 Identities=26% Similarity=0.293 Sum_probs=128.9
Q ss_pred CCch-HHHHHHHHHhhcCCC--ceEEecchH-HHHHH-HHhccCC--CCeEEEcCCCCccHHHHHhhhcccCCcEEEEec
Q 022194 53 GNPT-RDALESLLAKLDKAD--RALCFTSGM-AALAA-VTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (301)
Q Consensus 53 g~~~-~~~l~~~l~~~~~~~--~~i~~~sG~-~ai~~-~~~~~~~--g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~ 125 (301)
|.+. ++++++++++++|.+ +++++++|+ ++..+ ....+.+ ||+|+++++.|+.+...+....+..|.+++.++
T Consensus 61 g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~ 140 (398)
T cd00613 61 GRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVP 140 (398)
T ss_pred hHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEec
Confidence 5555 889999999999887 666777666 44443 3344555 999999999999998777555556668888887
Q ss_pred CC-----CHHHHHhhcCCCceEEEEeCCCCCccccccH-HHHHHHHHHcCCEEEEeCCcCCcc-ccCccCCCCcEEEecc
Q 022194 126 TC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI-RKIAEMAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSA 198 (301)
Q Consensus 126 ~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l-~~l~~l~~~~~~~li~D~~~~~~~-~~~~~~~~~di~~~S~ 198 (301)
.+ |++++++++.+++++|++++++ ++|.+.++ ++|+++|+++|+++|+|++++.+. ...+...++|++++|+
T Consensus 141 ~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~ 219 (398)
T cd00613 141 SDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNL 219 (398)
T ss_pred cCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeec
Confidence 54 6799999998899999999985 89999885 999999999999999999986543 3344566899999999
Q ss_pred cccccCC---CCceeeEEEEcch
Q 022194 199 TKFIAGH---SDVMAGVLAVKGE 218 (301)
Q Consensus 199 sK~~~g~---~g~~~g~~~~~~~ 218 (301)
||++ +| +|.++|+++.+++
T Consensus 220 ~K~~-~p~g~Ggp~~g~l~~~~~ 241 (398)
T cd00613 220 QKTG-VPHGGGGPGAGFFAVKKE 241 (398)
T ss_pred cccC-CCCCCCCCceeEEEEhhh
Confidence 9998 54 2356789988754
No 221
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.85 E-value=2.2e-19 Score=158.65 Aligned_cols=212 Identities=18% Similarity=0.199 Sum_probs=150.7
Q ss_pred chHHHHHHHHHhhcCCCc----eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 55 PTRDALESLLAKLDKADR----ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~----~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
+..+++++.+++++|.++ .+++++|++++. ++..++.++|+|++..+.+++.. +...++..|.+++.++.+
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCC
Confidence 448899999999999762 335678888886 56667788888776666554431 235566778888887753
Q ss_pred ---CHHHHHhhcCC--CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccc
Q 022194 128 ---DLDEVASAIGP--WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (301)
Q Consensus 128 ---d~~~l~~~l~~--~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~ 201 (301)
|++++++.+++ +++.+++++++|++|...|+++|+++|+++|+++|+|++++.+... .....+.|++++|++|+
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~ 188 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKC 188 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcc
Confidence 78999998863 4567888899999999999999999999999999999998877543 33455799999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhh-----------------hhcCCCCCHHhHHHHHccccc------HHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQ-----------------NAEGSGLAPFDCWICLRGVKT------MALRVEKQQ 258 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~ 258 (301)
++|++| .|+++.+++.+ +.+.... .....+.+.....++..+++. +.+..++..
T Consensus 189 l~~~~G--~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 265 (355)
T TIGR03301 189 LEGVPG--FGFVIARRDLL-EASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYR 265 (355)
T ss_pred cccCCc--eeEEEECHHHH-HHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 878877 48998886543 3332100 001123344443443333332 455566778
Q ss_pred HHHHHHHHHHHhC
Q 022194 259 DNAQKIAEFLASH 271 (301)
Q Consensus 259 ~~~~~l~~~l~~~ 271 (301)
++++++.+.|+++
T Consensus 266 ~~~~~~~~~L~~~ 278 (355)
T TIGR03301 266 RNRELLVDGLRAL 278 (355)
T ss_pred HHHHHHHHHHHHc
Confidence 8888888888775
No 222
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.85 E-value=1.4e-19 Score=162.47 Aligned_cols=214 Identities=20% Similarity=0.191 Sum_probs=152.6
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHHHHHhccC----------CC-CeEEEcCCCCccHHHHHhhh---------
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLG----------TG-EEIVAGDDLYGGTDRLLSRV--------- 113 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~~~----------~g-~~Vlv~~~~y~~~~~~~~~~--------- 113 (301)
.+...++++.++++++.+.+++++||++|+.+++.++. +| ++|++....||+.......+
T Consensus 82 ~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~ 161 (401)
T PRK00854 82 NDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGG 161 (401)
T ss_pred CHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccccc
Confidence 45688999999999998899999999999864444331 23 68998888888864322111
Q ss_pred cccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CccccC---
Q 022194 114 TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR--- 185 (301)
Q Consensus 114 ~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~~--- 185 (301)
.......+..++..|++++++.+.+++++|++++++||+|.+.| +++|+++|++||+++|+||+|+ .+..+.
T Consensus 162 ~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~ 241 (401)
T PRK00854 162 FGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLA 241 (401)
T ss_pred CCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhH
Confidence 11112345666777999999999889999999999999999986 9999999999999999999997 222211
Q ss_pred --ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHH
Q 022194 186 --PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNA 261 (301)
Q Consensus 186 --~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~ 261 (301)
......|+++ ++|++++ +.+++|+++++++ +.+.+.........+.++..++++...++.+.+ ..++..++.
T Consensus 242 ~~~~g~~~D~~~--~~K~l~g-g~~~ig~v~~~~~-~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~ 317 (401)
T PRK00854 242 EEHEGIEADVTL--IGKALSG-GFYPVSAVLSNSE-VLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMG 317 (401)
T ss_pred HhhcCCCCCEEE--ecccccC-CccCeEEEEEcHH-HHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 1122357776 4699965 3357888988754 444333222333344577777777777776543 557777777
Q ss_pred HHHHHHHHhC
Q 022194 262 QKIAEFLASH 271 (301)
Q Consensus 262 ~~l~~~l~~~ 271 (301)
+++.+.|++.
T Consensus 318 ~~l~~~L~~~ 327 (401)
T PRK00854 318 AYFLEGLRSI 327 (401)
T ss_pred HHHHHHHHhh
Confidence 8888888774
No 223
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.85 E-value=2.2e-20 Score=160.97 Aligned_cols=158 Identities=22% Similarity=0.211 Sum_probs=133.3
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecchHHHHHHH-Hhc-cCCCC----eEEEcCCCCccHHHHHhhhcccCCcEEEEecCC
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAV-THL-LGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~~-~~~-~~~g~----~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~ 127 (301)
..++.++.++++++++ +++++.++|++++++ ... ...+| +|++..-.|++....+ ...+..|+++++++..
T Consensus 86 ~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~-~~l~~~g~~Vt~lpv~ 164 (428)
T KOG1549|consen 86 AVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC-RALQEEGLEVTYLPVE 164 (428)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHH-HHHHhcCeEEEEeccC
Confidence 3788999999999987 544444447998744 443 22344 8999999999888776 5667778999999975
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccc
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~ 201 (301)
|.+.+++.++++|++|.+.+.+|.+|.++|++||.++|+++++.+++|.+++.|... +..+.++|++..|.||+
T Consensus 165 ~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ 244 (428)
T KOG1549|consen 165 DSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKI 244 (428)
T ss_pred ccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccc
Confidence 789999999999999999999999999999999999999999999999999999876 67788999999999999
Q ss_pred ccCCCCceeeEEEEcc
Q 022194 202 IAGHSDVMAGVLAVKG 217 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~ 217 (301)
| ||+| .|++++++
T Consensus 245 y-gp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 245 Y-GPPG--IGALYVRR 257 (428)
T ss_pred c-CCCc--ceEEEEcc
Confidence 9 6776 58888885
No 224
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.84 E-value=4.9e-19 Score=158.08 Aligned_cols=211 Identities=18% Similarity=0.164 Sum_probs=150.6
Q ss_pred CCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-----
Q 022194 53 GNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----- 126 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~----- 126 (301)
+.+...+|++.+++++|.++++++.+|++|+. ++..+++|||.| +++|.|..+. ..+...|..++.++.
T Consensus 51 ~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~----~~i~~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 51 GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTR----GHIEANGAVPVDLVIDEAHD 125 (431)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchH----HHHHhCCCEeEEEecccccc
Confidence 34558899999999999999999999999985 677789999987 6888888775 455567777776654
Q ss_pred ----------CCHHHHHhhcCCC----ceEEEEeCCCCCc-ccccc---HHHHHHHHHHcCCEEEEeCCcCCc-------
Q 022194 127 ----------CDLDEVASAIGPW----TKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMSP------- 181 (301)
Q Consensus 127 ----------~d~~~l~~~l~~~----~~~v~i~~~~np~-G~~~~---l~~l~~l~~~~~~~li~D~~~~~~------- 181 (301)
.|++++++++.++ +++|+++.|+||+ |...+ +++|.++|++||+++|.|+++...
T Consensus 126 ~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~ 205 (431)
T cd00617 126 AQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKE 205 (431)
T ss_pred cccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhc
Confidence 2688999999854 7899999999998 77764 678899999999999999996532
Q ss_pred ----cccCcc-------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh-----cCCCCCHHhHHHHHc
Q 022194 182 ----VLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-----EGSGLAPFDCWICLR 245 (301)
Q Consensus 182 ----~~~~~~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 245 (301)
...... ....|.+..|++|...++ .+|+++++++.+.++++..... ...+++.....++..
T Consensus 206 r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~ 282 (431)
T cd00617 206 REEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQ 282 (431)
T ss_pred ccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHH
Confidence 111111 124788899999987654 3689999987777766532211 112334444333332
Q ss_pred ccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 246 GVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 246 ~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+++.. .+..++..++++++.+.|++.
T Consensus 283 gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 283 GLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 43221 234555556678888888875
No 225
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.84 E-value=1.2e-19 Score=162.60 Aligned_cols=255 Identities=15% Similarity=0.111 Sum_probs=164.5
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
.+++||.++ +--+|..++.+..+.. .+.+ + ..........+...+++++|+++.+.+.+++++||++|+.+++.
T Consensus 40 ~~~lD~~~g~~~~~lGh~~p~v~~ai~-~~~~--~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk 115 (396)
T PRK04073 40 NRYMDMLSAYSAVNQGHRHPKIIQALK-DQAD--K-VTLTSRAFHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIK 115 (396)
T ss_pred CEEEEcCCCHHhccCCCCCHHHHHHHH-HHHh--h-ccccccccCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHH
Confidence 367787522 2236766666554432 2211 1 11111112345578899999999888889999999999864444
Q ss_pred cc-----------CCCCeEEEcCCCCccHHHHHhhhccc------CC---cEEEEecCCCHHHHHhhcCCCceEEEEeCC
Q 022194 89 LL-----------GTGEEIVAGDDLYGGTDRLLSRVTPK------TG---VVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 89 ~~-----------~~g~~Vlv~~~~y~~~~~~~~~~~~~------~g---~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~ 148 (301)
+. ..+++|+..+..||+.......+... .+ ..+..++..|++++++.+.+++++|+++++
T Consensus 116 ~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~viiep~ 195 (396)
T PRK04073 116 AARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITPNTAAFLVEPI 195 (396)
T ss_pred HHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcccCeEEEEEcCc
Confidence 32 12367898888898865322111111 00 123456666899999999888999999999
Q ss_pred CCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccc-cCc---cCCCCcEEEecccccccCCCCceeeEEEEcchhH
Q 022194 149 TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL-SRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (301)
Q Consensus 149 ~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~ 220 (301)
+||+|.+.+ +++|.++|+++|+++|+||+|..... ... ...+....+.+++|.++ .++++.|++++++ .+
T Consensus 196 ~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg-~gg~~ig~~~~~~-~i 273 (396)
T PRK04073 196 QGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALG-GGVFPISCVAANR-DI 273 (396)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEeccccc-CCCCcceEEEEcH-HH
Confidence 999999875 89999999999999999999873221 111 11233333455899995 4567889998875 45
Q ss_pred HHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 221 AKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.........+.++..+++++..++.+. ...++..++.+++.+.|++.
T Consensus 274 ~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l 326 (396)
T PRK04073 274 LGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI 326 (396)
T ss_pred HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 5544332333345567777777777776542 33456666677788888764
No 226
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.84 E-value=1.2e-19 Score=162.84 Aligned_cols=252 Identities=18% Similarity=0.188 Sum_probs=166.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~ 87 (301)
.+++||.++ ++++|. ++|.+......+.+ +.. .++.. ..+...++++.|++..+.+.+++++||++|+.+++
T Consensus 40 ~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~--~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~ 114 (403)
T PRK05093 40 KEYIDFAGGIAVTALGH-CHPALVKALKEQGE--KLW--HISNVFTNEPALRLAKKLIDATFAERVFFANSGAEANEAAF 114 (403)
T ss_pred CEEEEcCcCHHhccCCC-CCHHHHHHHHHHHH--hcC--cccCccCCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHH
Confidence 478999744 689999 66655544322211 111 11111 34557799999999888788999999998886444
Q ss_pred hcc---------CCCCeEEEcCCCCccHHHHHhhh---------cccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 88 HLL---------GTGEEIVAGDDLYGGTDRLLSRV---------TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 88 ~~~---------~~g~~Vlv~~~~y~~~~~~~~~~---------~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
.++ ...++|+..+..||+........ .......+..++..|++.+++.+.+++++|+++ |.
T Consensus 115 klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaiiie-p~ 193 (403)
T PRK05093 115 KLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVIDDHTCAVVVE-PI 193 (403)
T ss_pred HHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhcCCeEEEEEe-cc
Confidence 433 23467888899999874321111 111123456677779999999998888999999 56
Q ss_pred CCccccc-c----HHHHHHHHHHcCCEEEEeCCcCCcccc-Cc---cCCCCcEEEecccccccCCCCceeeEEEEcchhH
Q 022194 150 NPRQQIC-D----IRKIAEMAHAHGALLLVDNSIMSPVLS-RP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (301)
Q Consensus 150 np~G~~~-~----l~~l~~l~~~~~~~li~D~~~~~~~~~-~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~ 220 (301)
|++|... + +++|+++|++||+++|+||+|+..... .. ...+.+..+.|+||.++ +|++.|++++++ .+
T Consensus 194 ~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~--~G~rig~vv~~~-~i 270 (403)
T PRK05093 194 QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALG--GGFPIGAMLTTA-EI 270 (403)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEeccccc--CCcceEEEEEcH-HH
Confidence 6665543 2 999999999999999999998732221 11 12333444678999995 468999999875 45
Q ss_pred HHHHHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 221 AKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+...........++..++++...++.+ .+..+++.++.+++.+.|+++
T Consensus 271 ~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (403)
T PRK05093 271 ASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKI 323 (403)
T ss_pred HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 454433223334455666666666655443 345577778888888888764
No 227
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.84 E-value=1.6e-19 Score=161.63 Aligned_cols=254 Identities=17% Similarity=0.137 Sum_probs=166.8
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
.+++||.++ ++++|.. +|.+..+...+.+ . .......+..+...++++.|+++++.+.+++++||++|+.+.+.
T Consensus 35 ~~ylD~~~g~~~~~lGh~-~p~v~~a~~~~~~--~-~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk 110 (397)
T TIGR03246 35 KEYIDFAGGIAVNALGHA-HPELVKALIEQAD--K-LWHIGNGYTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALK 110 (397)
T ss_pred CEEEECCcCHhhccCCCC-CHHHHHHHHHHHH--h-cccccCccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHH
Confidence 589999744 8999996 5655544322211 1 11111112345688999999999888889999999999864444
Q ss_pred cc---------CCCCeEEEcCCCCccHHHHHhhhcc---------cCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 89 LL---------GTGEEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 89 ~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~---------~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
++ ..+++|+..+..||+.....-.... .....+..++..|++++++.+.+++++|+++.+++
T Consensus 111 ~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epi~~ 190 (397)
T TIGR03246 111 LARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCAVIVEPIQG 190 (397)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCeEEEEEecccC
Confidence 43 1346788888889987532211111 01123455666799999999988899999997777
Q ss_pred Cccccc----cHHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHH
Q 022194 151 PRQQIC----DIRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (301)
Q Consensus 151 p~G~~~----~l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~ 222 (301)
+.|... .+++|.++|++||+++|+||++... ..+ .....+....+.+++|.++ +|++.|++++++ .+.+
T Consensus 191 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lg--gG~pigav~~~~-~i~~ 267 (397)
T TIGR03246 191 EGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALG--GGFPIGAMLTTT-EIAA 267 (397)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhh--CCcceeEEEEcH-HHHH
Confidence 677553 3999999999999999999998421 111 1122344444557999995 367889998875 4555
Q ss_pred HHHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 223 ELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.......+.+.++..+++++..++.+ .+..++..++.+++.+.|++.
T Consensus 268 ~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l 318 (397)
T TIGR03246 268 HLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKI 318 (397)
T ss_pred hccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 4432222233445666666666666544 345577777778888877663
No 228
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.84 E-value=7e-20 Score=165.14 Aligned_cols=253 Identities=19% Similarity=0.178 Sum_probs=164.6
Q ss_pred ceeeecCCCCCC--CCccccCeeecceeecCCCCCCCCccccCC--CCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNEFDP--YGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~--~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
..++||.+++++ +|. ++|.+......... . . ..|... ..+...++++.++++++ .+++++++||++|+.
T Consensus 36 ~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~--~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~ 110 (413)
T cd00610 36 NRYLDFLSGIGVLNLGH-NHPEVVEALKEQLA--K-L-THFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVE 110 (413)
T ss_pred CEEEEcCccHHhhccCC-CCHHHHHHHHHHHH--h-C-cCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence 478999866555 665 55655544322211 1 1 122221 23558999999999998 678888899999986
Q ss_pred HHHhc---cCCCCeEEEcCCCCccHHHHHhhhcc---------cCCcEEEEecCC-----------CHHHHHhhcCC---
Q 022194 85 AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTC-----------DLDEVASAIGP--- 138 (301)
Q Consensus 85 ~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~---------~~g~~~~~~~~~-----------d~~~l~~~l~~--- 138 (301)
+++.+ ..++++|++.++.||+.......... .....+..++.+ |++.+++.+++
T Consensus 111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 190 (413)
T cd00610 111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPE 190 (413)
T ss_pred HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCC
Confidence 44443 36789999999999997543322211 122345566665 78889888875
Q ss_pred CceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcc-ccC---ccCCCCcEEEecccccccCCCCcee
Q 022194 139 WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPV-LSR---PLELGADIVMHSATKFIAGHSDVMA 210 (301)
Q Consensus 139 ~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~-~~~---~~~~~~di~~~S~sK~~~g~~g~~~ 210 (301)
++++|+++..++++|...+ +++|.++|++||+++|+||+|+... ... ....+.+..+.|++|++++ |++.
T Consensus 191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~--g~~~ 268 (413)
T cd00610 191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGG--GLPL 268 (413)
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccC--cccc
Confidence 5778888877788898876 9999999999999999999987431 111 1122333345688999964 4788
Q ss_pred eEEEEcchhHHHHH--HHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 211 GVLAVKGERLAKEL--YFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 211 g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
|+++++ +.+.+.+ .........+.++..+.++...++.+. +..+++.++.+++.+.|++.
T Consensus 269 g~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 269 GAVLGR-EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLREL 332 (413)
T ss_pred EEEEEc-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 998886 4555543 222222334556666666655555443 35566677777777777653
No 229
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.1e-20 Score=153.23 Aligned_cols=253 Identities=20% Similarity=0.221 Sum_probs=175.1
Q ss_pred CCccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC--CCch-HHHHHHHHHhhcCCCceEEecchHHHH
Q 022194 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPT-RDALESLLAKLDKADRALCFTSGMAAL 83 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~~~-~~~l~~~l~~~~~~~~~i~~~sG~~ai 83 (301)
.+.+..+|+|+ .|||+|++++|.+........+. ...+....++ |... ...|+..++++.+-++.++..+|..|.
T Consensus 63 ~G~~k~ilnFc-aNnYLGLsshPeii~a~~~alee-yGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdAN 140 (417)
T KOG1359|consen 63 KGSDKKILNFC-ANNYLGLSSHPEIINAGQKALEE-YGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDAN 140 (417)
T ss_pred eccccceeeec-ccccccccCChHHHHHHHHHHHH-hCCCccceeEEecchHHHHHHHHHHHHHhCCCceEEeccccccc
Confidence 45677899999 99999999999998764332221 1111122222 5544 789999999999999999999999887
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHH-HHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD-EVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~-~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
. ++.++++|.|.|+-....|-+..... .++++++ .++.-+.+ .+.++.+-+.++|+......+.|.+.|+++|
T Consensus 141 ag~feail~pedAvfSDeLNhASIIdGi-rLckry~----h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei 215 (417)
T KOG1359|consen 141 AGAFEAILTPEDAVFSDELNHASIIDGI-RLCKRYR----HVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEI 215 (417)
T ss_pred hHHHHHhcChhhhhhccccccchhhhhh-HHHhhhc----cchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHH
Confidence 4 77778999998888777777766544 4555333 22222222 2233444577888989999999999999999
Q ss_pred HHHHHHcCCEEEEeCCcCCccccCcc---------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh--hh
Q 022194 162 AEMAHAHGALLLVDNSIMSPVLSRPL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NA 230 (301)
Q Consensus 162 ~~l~~~~~~~li~D~~~~~~~~~~~~---------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~--~~ 230 (301)
..++++||.++++||+|+++.++... .-..|++..+++|+++|. .+|+..++. .+.+.++... ..
T Consensus 216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga---~GGyttgp~-~li~llrqr~Rpyl 291 (417)
T KOG1359|consen 216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA---SGGYTTGPK-PLISLLRQRSRPYL 291 (417)
T ss_pred HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC---CCCCccCCh-hHHHHHHhcCCcee
Confidence 99999999999999999987765211 124689999999999754 468887764 4545444332 23
Q ss_pred cCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHh
Q 022194 231 EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 231 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.+.++|.......+.++.+ ...+++...+.+++++.++.
T Consensus 292 FSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~ 334 (417)
T KOG1359|consen 292 FSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEA 334 (417)
T ss_pred ecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 44666665443333333322 34455666777778877764
No 230
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.84 E-value=3e-20 Score=163.57 Aligned_cols=193 Identities=19% Similarity=0.183 Sum_probs=142.3
Q ss_pred HHHHHHHHHhhcCCC----ceEEecchHHHHH-HHHhccC------------C--CCeEEEcCCCCccHHHHHhhhcccC
Q 022194 57 RDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLG------------T--GEEIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~----~~i~~~sG~~ai~-~~~~~~~------------~--g~~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
++++.+++++++|.+ +.+++++|++++. ++..+.. + ++.|+++++.|.++... +...
T Consensus 40 e~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~----~~~~ 115 (345)
T cd06450 40 EAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKA----AAYL 115 (345)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHH----HHHH
Confidence 777888899998875 5777888888875 4444321 2 34788888898887533 3444
Q ss_pred CcEEEEecCC-----CHHHHHhhcCC------CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCc
Q 022194 118 GVVVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP 186 (301)
Q Consensus 118 g~~~~~~~~~-----d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~ 186 (301)
|.+++.++.+ |++++++++.+ ++++|++++++|++|.+.|+++|+++|+++|+++++|++|+.+.....
T Consensus 116 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~ 195 (345)
T cd06450 116 DVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFP 195 (345)
T ss_pred hcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhCh
Confidence 7777777643 78999999876 788999999999999999999999999999999999999987764321
Q ss_pred c-------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc--ccHHHHHHHH
Q 022194 187 L-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV--KTMALRVEKQ 257 (301)
Q Consensus 187 ~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~ 257 (301)
. ..++|++..|+||++++|.| .|+++.+ ....++.+..+ ..+.+++++.
T Consensus 196 ~~~~~~~~~~~~d~~~~s~~K~l~~p~g--~g~~~~~--------------------~~~~~~~l~~l~~~g~~~~~~~~ 253 (345)
T cd06450 196 EPRHLDFGIERVDSISVDPHKYGLVPLG--CSAVLVR--------------------ALKLWATLRRFGRDGYGEHIDRI 253 (345)
T ss_pred hhHHHhcCccccCEEEEchhHhhCCCcc--hHHHHHH--------------------HHHHHHHHHHHhHHHHHHHHHHH
Confidence 1 12579999999999877654 4666544 22223333322 2356677888
Q ss_pred HHHHHHHHHHHHhCCCcc
Q 022194 258 QDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 258 ~~~~~~l~~~l~~~~~v~ 275 (301)
.++++++.+.|++++++.
T Consensus 254 ~~~~~~l~~~L~~~~~~~ 271 (345)
T cd06450 254 VDLAKYLAELIRADPGFE 271 (345)
T ss_pred HHHHHHHHHHHhcCCCeE
Confidence 889999999998887654
No 231
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.83 E-value=3.2e-19 Score=158.92 Aligned_cols=252 Identities=16% Similarity=0.115 Sum_probs=164.4
Q ss_pred ceeeecCCCCC---CCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEFD---PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~---~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~ 87 (301)
.+++||. +++ |+|. ++|.+..+...+-+. ..........+.+.++.+.+++..+.+.+++++||++|+.+++
T Consensus 29 ~~~lD~~-s~~~~~~lG~-~~p~v~~a~~~~~~~---~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~ 103 (377)
T PRK02936 29 KTYLDFT-SGIAVCNLGH-CHPTVTKAVQEQLDD---IWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAAL 103 (377)
T ss_pred CEEEECC-cchhhccCCC-CCHHHHHHHHHHHHh---ccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHH
Confidence 4789998 566 8997 555555432222111 1111111234558888888888877778889999999986444
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHhhhcccC---------CcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccc
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~~---------g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~ 155 (301)
.+ ...+++|++.++.||+............ ...+..++..|++.+++.+.+++++|+++.++++.|..
T Consensus 104 ~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~ 183 (377)
T PRK02936 104 KLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVI 183 (377)
T ss_pred HHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCc
Confidence 43 2334679999999997643221111110 01234556668999999998889999999999988877
Q ss_pred cc----HHHHHHHHHHcCCEEEEeCCcCCccc-cCc---cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh
Q 022194 156 CD----IRKIAEMAHAHGALLLVDNSIMSPVL-SRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (301)
Q Consensus 156 ~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~ 227 (301)
.+ +++|.++|++||+++|+||+|..... ..+ ...+.+..+.++||.++ +|++.|++++++ .+.+.+...
T Consensus 184 ~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~--~G~~ig~v~~~~-~~~~~~~~~ 260 (377)
T PRK02936 184 PADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLG--NGIPVGAMIGKK-ELGTAFGPG 260 (377)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEccccc--CCCccEEEEEcH-HHHhhccCC
Confidence 42 99999999999999999999863211 111 12233323557999995 467889998874 555544333
Q ss_pred hhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 228 QNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
......+.++..++++...++.+ .+.+++..++.+++++.|++
T Consensus 261 ~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~ 305 (377)
T PRK02936 261 SHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQE 305 (377)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 33334456777777777776654 24556777777777777765
No 232
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.83 E-value=2.7e-19 Score=160.44 Aligned_cols=253 Identities=16% Similarity=0.137 Sum_probs=160.2
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||.++ +.++|.. +|.+........+. .......+..+.+.++++++++..+.+++++++||++|+.+++.
T Consensus 39 ~~~iD~~~g~~~~~lG~~-~p~v~~a~~~~~~~---~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~ 114 (396)
T PRK02627 39 KEYLDFLAGIAVNNLGHC-HPKLVEAIQEQAAK---LIHTSNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIK 114 (396)
T ss_pred CEEEECCccHHhccCCCC-CHHHHHHHHHHHhh---ccccccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHH
Confidence 467888633 6678874 34444332222111 11111122356699999999999998888889999999864433
Q ss_pred -ccCC-------CCeEEEcCCCCccHHHHHhhhccc---------CCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 89 -LLGT-------GEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 89 -~~~~-------g~~Vlv~~~~y~~~~~~~~~~~~~---------~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
+... .++|++.++.||++.......... ....+..++..|++++++++.+++++|++++++||
T Consensus 115 ~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~ 194 (396)
T PRK02627 115 LARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGE 194 (396)
T ss_pred HHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCC
Confidence 3222 167999999999875332111100 01123444555899999999888999999999999
Q ss_pred cccc-c---cHHHHHHHHHHcCCEEEEeCCcCCccc-c---CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 152 RQQI-C---DIRKIAEMAHAHGALLLVDNSIMSPVL-S---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 152 ~G~~-~---~l~~l~~l~~~~~~~li~D~~~~~~~~-~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
+|.. . .+++|.++|++||+++|+||+|+.... . .....+.+..+.++||.++ +|++.|++++++ .+.+.
T Consensus 195 ~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~--~G~rig~~~~~~-~~~~~ 271 (396)
T PRK02627 195 GGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLG--GGVPIGAVLAKE-KVADV 271 (396)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhh--CCcccEEEEEcH-HHHhc
Confidence 9843 3 389999999999999999999873211 1 1112233333557999995 468999999875 45554
Q ss_pred HHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 224 LYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
+.........+.++..++++...++.+. +..++..++.+++++.|++
T Consensus 272 ~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (396)
T PRK02627 272 FTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRE 320 (396)
T ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 4333333445567777777666665432 2334555555555555543
No 233
>PRK02769 histidine decarboxylase; Provisional
Probab=99.83 E-value=5.6e-19 Score=155.96 Aligned_cols=218 Identities=17% Similarity=0.211 Sum_probs=153.6
Q ss_pred HHHHHHHHHhhcCCC--c--eEEecchHHHHH-HHHhc--cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD--R--ALCFTSGMAALA-AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~--~i~~~sG~~ai~-~~~~~--~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+++.+++++++|.+ + .+++++||+++. ++... ..++++|++++-.|++....+ +..|++...++.+
T Consensus 67 e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~----~~lg~~~~~V~~~~~ 142 (380)
T PRK02769 67 ERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIA----RLLRIKSRVITSLPN 142 (380)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHH----HHcCCCCceeccCCC
Confidence 567888899999875 3 366677788864 33222 456889999999999997554 3334433344432
Q ss_pred ---CHHHHHhhcCCC---ceEEEEeCCCCCccccccHHHHHHHHHHcC---CEEEEeCCcCCcccc-------CccCCCC
Q 022194 128 ---DLDEVASAIGPW---TKLVWVESPTNPRQQICDIRKIAEMAHAHG---ALLLVDNSIMSPVLS-------RPLELGA 191 (301)
Q Consensus 128 ---d~~~l~~~l~~~---~~~v~i~~~~np~G~~~~l~~l~~l~~~~~---~~li~D~~~~~~~~~-------~~~~~~~ 191 (301)
|+++++++++++ +.+|+++.++|++|.+.|+++|+++|+++| +++++|.+++.+..+ -....++
T Consensus 143 g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~v 222 (380)
T PRK02769 143 GEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGI 222 (380)
T ss_pred CcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCC
Confidence 889999988765 899999999999999999999999999998 699999999987663 1112389
Q ss_pred cEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh----h----hcC--CCCCHHhHHHHHccccc--HHHHHHHHHH
Q 022194 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----N----AEG--SGLAPFDCWICLRGVKT--MALRVEKQQD 259 (301)
Q Consensus 192 di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~----~----~~~--~~~~~~~~~~~~~~l~~--~~~~~~~~~~ 259 (301)
|.++.|.||++++|.| .|+++.+++.+. .+.... . ..+ +.......|+.+..+.. +.+..++..+
T Consensus 223 Dsis~s~HK~~~~P~g--~G~l~~r~~~~~-~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~ 299 (380)
T PRK02769 223 DSIAISGHKFIGSPMP--CGIVLAKKKYVE-RISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLD 299 (380)
T ss_pred CEEEECCcccCCCCCC--cEEEEEehhhhh-hcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9999999999977877 588888865432 221100 0 011 12233445555555433 5677788899
Q ss_pred HHHHHHHHHHhCCCcceEecCCC
Q 022194 260 NAQKIAEFLASHPRVKKVNYAGL 282 (301)
Q Consensus 260 ~~~~l~~~l~~~~~v~~v~~p~~ 282 (301)
.++++.+.|++. ++..+..|..
T Consensus 300 la~~l~~~L~~~-g~~~~~~p~~ 321 (380)
T PRK02769 300 MAQYAVDRLQAN-GIPAWRNPNS 321 (380)
T ss_pred HHHHHHHHHHhC-CCEEEcCCCc
Confidence 999999999774 4555555544
No 234
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.83 E-value=4.3e-19 Score=139.87 Aligned_cols=154 Identities=29% Similarity=0.335 Sum_probs=124.8
Q ss_pred HHHHHHHHHhhc--CCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCC-----
Q 022194 57 RDALESLLAKLD--KADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD----- 128 (301)
Q Consensus 57 ~~~l~~~l~~~~--~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d----- 128 (301)
.+++++.+++++ +.++++++++|++|+. ++..+.+++++|+++++.|++... ..+...|.+++.++.++
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 468899999999 7778889998899986 555566779999999999998863 34567788888887641
Q ss_pred H--HHHHhhc-CCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC----ccCCCCcEEEeccccc
Q 022194 129 L--DEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSATKF 201 (301)
Q Consensus 129 ~--~~l~~~l-~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~sK~ 201 (301)
. +.+++.. .++++++++++++|++|...|+++|+++|+++|+++|+|++++.+.... ....++|+++.|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccc
Confidence 1 2444333 4688999999999999999999999999999999999999998776553 5556799999999999
Q ss_pred ccCCCCceeeEEEEc
Q 022194 202 IAGHSDVMAGVLAVK 216 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~ 216 (301)
+++ + +.|+++.+
T Consensus 159 ~~~-~--~~G~l~~~ 170 (170)
T cd01494 159 LGG-E--GGGVVIVK 170 (170)
T ss_pred cCC-C--ceEEEEeC
Confidence 976 3 46888764
No 235
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.82 E-value=2.2e-19 Score=157.62 Aligned_cols=208 Identities=22% Similarity=0.264 Sum_probs=145.6
Q ss_pred hHHHHHHHHHhhcCCCceEEecchH-HHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------
Q 022194 56 TRDALESLLAKLDKADRALCFTSGM-AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~~i~~~sG~-~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------ 127 (301)
...+.++.+++.||+++..++++|| .++ .++++++++||+|++++++|.++. ..+...|+.++++++.
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~----~alil~ga~Pvyi~p~~~~~gi 142 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY----NALILSGAIPVYIPPEDNEYGI 142 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH----HHHHHHTEEEEEEEEEE-TTS-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH----HHHHHcCCeEEEecCCccccCC
Confidence 3889999999999999999999997 666 588899999999999999999887 4556677888887753
Q ss_pred ----CH-----HHHHhhcC--CCc---eEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-----CccC
Q 022194 128 ----DL-----DEVASAIG--PWT---KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE 188 (301)
Q Consensus 128 ----d~-----~~l~~~l~--~~~---~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~ 188 (301)
+. +.++++++ +.. ++|++++|++ .|.+.++++|+++|++++++|++||+|+.-... ....
T Consensus 143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~ 221 (417)
T PF01276_consen 143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA 221 (417)
T ss_dssp BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence 34 78888886 333 4599999999 799999999999999999999999999854322 3445
Q ss_pred CCCc-------EEEecccccccCCCCceeeEEEEcchh--HHHHHHHhhhhcCCCCCHHhHHH----HHcccc-c-HHHH
Q 022194 189 LGAD-------IVMHSATKFIAGHSDVMAGVLAVKGER--LAKELYFLQNAEGSGLAPFDCWI----CLRGVK-T-MALR 253 (301)
Q Consensus 189 ~~~d-------i~~~S~sK~~~g~~g~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~-~-~~~~ 253 (301)
.|+| +++.|.||++++.. +++++..+... -.+++.........+.+.....+ +.+.++ . =.+.
T Consensus 222 ~gad~~~~~~~~vvqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l 299 (417)
T PF01276_consen 222 LGADRPNDPGIIVVQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGREL 299 (417)
T ss_dssp TTSS-CTSBEEEEEEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHH
T ss_pred ccCccccccceeeeechhhcccccc--cceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHH
Confidence 6889 99999999997765 58888888764 23444443333333333222211 122221 1 1345
Q ss_pred HHHHHHHHHHHHHHHHh
Q 022194 254 VEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 254 ~~~~~~~~~~l~~~l~~ 270 (301)
.++..++++.+++.|++
T Consensus 300 ~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 300 LEEAIELAEEFRKKINR 316 (417)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 57778888889998843
No 236
>PRK10534 L-threonine aldolase; Provisional
Probab=99.82 E-value=7.8e-19 Score=153.86 Aligned_cols=211 Identities=21% Similarity=0.239 Sum_probs=139.4
Q ss_pred CCchHHHHHHHHHhhcCCCceEEecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC-CcEEEEecCC---
Q 022194 53 GNPTRDALESLLAKLDKADRALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTC--- 127 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~-g~~~~~~~~~--- 127 (301)
.++...+|++.+++++|.+..+++++|++++ ..+..++.+||+|+++.|.|...... ...... +++++.++.+
T Consensus 32 ~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 109 (333)
T PRK10534 32 DDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEA--GGAAVLGSIQPQPIDAAADG 109 (333)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcC--CchHHhcCceEEeecCCCCC
Confidence 3567999999999999999889999998776 46667789999999988777432210 001222 2555655432
Q ss_pred --CHHHHHhhcCC------CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc---cCc---cCCC
Q 022194 128 --DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL---SRP---LELG 190 (301)
Q Consensus 128 --d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~---~~~---~~~~ 190 (301)
|++++++++.+ ++++|++++|+ +|.+.+ +++|+++|+++++++++||+|..... ... ....
T Consensus 110 ~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~ 187 (333)
T PRK10534 110 TLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQY 187 (333)
T ss_pred CCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhc
Confidence 68999998865 58899999766 599876 45567889999999999999763211 111 0113
Q ss_pred CcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCC--CHHhHHHHHcccccHHHHHHHHHHHHHHHHHHH
Q 022194 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l 268 (301)
.+.++.||||.++.+ .+|+++++ +.+.+.+.......+... ....+.+....++...+.+++..++++++.+.|
T Consensus 188 ~~~~~~s~SK~~~~~---~G~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L 263 (333)
T PRK10534 188 CDSFTICLSKGLGTP---VGSLLVGN-RDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQL 263 (333)
T ss_pred CCEEEEEeEcCCCCc---ccceEEcC-HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 465667899998543 24466654 566676665554433222 223344444455543455556666677888888
Q ss_pred HhC
Q 022194 269 ASH 271 (301)
Q Consensus 269 ~~~ 271 (301)
+++
T Consensus 264 ~~~ 266 (333)
T PRK10534 264 REA 266 (333)
T ss_pred HhC
Confidence 875
No 237
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.82 E-value=7.4e-19 Score=157.74 Aligned_cols=253 Identities=17% Similarity=0.148 Sum_probs=164.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||.++ +.++|..++. +..+...+.. +... ....+..+...++++.|+++.+.+.+++++||++|+..++.
T Consensus 39 ~~~lD~~~g~~~~~lGh~~p~-v~~A~~~~~~--~~~~-~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk 114 (406)
T PRK12381 39 KEYIDFAGGIAVNALGHAHPA-LREALNEQAS--KFWH-TGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALK 114 (406)
T ss_pred CEEEEcCcCHhhccCCCCCHH-HHHHHHHHHh--hccc-ccCccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHH
Confidence 478999743 6799998544 4433222211 1011 11112345578899999998888889999999999864444
Q ss_pred cc---------CCCCeEEEcCCCCccHHHHHhhhcccC---------CcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 89 LL---------GTGEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 89 ~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~~~---------g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
+. .++.+|+..+..||+............ -..+..++..|++.+++.+.+++++|+++ |.+
T Consensus 115 ~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiE-Pv~ 193 (406)
T PRK12381 115 LARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVE-PIQ 193 (406)
T ss_pred HHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEEe-CCc
Confidence 32 245789999999999864321111110 01234456668999999998888888886 677
Q ss_pred Cccccc-----cHHHHHHHHHHcCCEEEEeCCcCCc-cccCc---cCCCCcEEEecccccccCCCCceeeEEEEcchhHH
Q 022194 151 PRQQIC-----DIRKIAEMAHAHGALLLVDNSIMSP-VLSRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 221 (301)
Q Consensus 151 p~G~~~-----~l~~l~~l~~~~~~~li~D~~~~~~-~~~~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~ 221 (301)
++|.+. .+++|.++|++||+++|+||+|... ..+.. ...+.+..+.+++|.++ +|++.|++++++ .+.
T Consensus 194 ~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~--gG~~ig~~~~~~-~~~ 270 (406)
T PRK12381 194 GEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALG--GGFPIGAMLTTE-KCA 270 (406)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhh--CCCceEEEEEcH-HHH
Confidence 777642 3899999999999999999998422 11111 12233344578999995 368899999875 455
Q ss_pred HHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 222 KELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+...........++..+.++...++.+. +.++++.++.+++.+.|++.
T Consensus 271 ~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 322 (406)
T PRK12381 271 SVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 544333333334557777766666555442 35567777777788877653
No 238
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.81 E-value=4.8e-18 Score=151.46 Aligned_cols=209 Identities=15% Similarity=0.131 Sum_probs=150.1
Q ss_pred HHHHHHHHHhhcCCC---ceEEecchH-HHHHHHHhccC----CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--
Q 022194 57 RDALESLLAKLDKAD---RALCFTSGM-AALAAVTHLLG----TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-- 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG~-~ai~~~~~~~~----~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-- 126 (301)
..++++++++++|.+ .++++++|| .++.+++..++ +||.|+++...|.+.. +.+...|++++.++.
T Consensus 107 ~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~----kAi~~~G~~pv~Vd~~~ 182 (444)
T TIGR03531 107 TNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI----KAISTAGFEPRVIETVL 182 (444)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH----HHHHHcCCeEEEeeeee
Confidence 567888888999988 688899998 57765544444 5899999998887775 667788888888884
Q ss_pred C------CHHHHHhhcCC---CceEEEEeCCC-CCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc------CccCCC
Q 022194 127 C------DLDEVASAIGP---WTKLVWVESPT-NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLELG 190 (301)
Q Consensus 127 ~------d~~~l~~~l~~---~~~~v~i~~~~-np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~------~~~~~~ 190 (301)
+ |++++++++.+ +..++++.+|+ ++.|...|+++|+++|++||+|+|+|++|+.+... .....|
T Consensus 183 d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~G 262 (444)
T TIGR03531 183 DGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVG 262 (444)
T ss_pred cCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccccc
Confidence 1 89999999974 45566666554 45567889999999999999999999999864322 122233
Q ss_pred -CcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHH--HcccccHHHHHHHHHHHHHHHHHH
Q 022194 191 -ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC--LRGVKTMALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 191 -~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~l~~~ 267 (301)
+|+++.|+||++..|.+ +|+++.+++.+.+.+...............+++. ..+.+.+.+.+++..++++++.+.
T Consensus 263 rad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~ 340 (444)
T TIGR03531 263 RVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKEL 340 (444)
T ss_pred CCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999976644 6777787777777655432211111112222222 334566788888888888888888
Q ss_pred HHhC
Q 022194 268 LASH 271 (301)
Q Consensus 268 l~~~ 271 (301)
|+++
T Consensus 341 L~~l 344 (444)
T TIGR03531 341 LQKL 344 (444)
T ss_pred HHHH
Confidence 8764
No 239
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.81 E-value=1.6e-18 Score=157.80 Aligned_cols=213 Identities=23% Similarity=0.284 Sum_probs=150.0
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----C
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----D 128 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d 128 (301)
..++++++++++|.+ +.+++++|++++. ++.++ .++||+|+++++.|+.+...+...+...|.+++.++.+ |
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d 193 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTD 193 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCC
Confidence 445557789999886 3445666677775 44444 47899999999999999877766667788999999875 7
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE--eCCcCCccccCccCCCCcEEEeccccc-----
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV--DNSIMSPVLSRPLELGADIVMHSATKF----- 201 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~--D~~~~~~~~~~~~~~~~di~~~S~sK~----- 201 (301)
++++++++.+++++|++++| |+||.+.|+++|+++||++|+++++ |.. +.+....+.+.++|++++|.+|+
T Consensus 194 ~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~~~~~~D~~~~s~~k~~~~~~ 271 (447)
T PRK00451 194 LEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPPGEYGADIVVGEGQPLGIPLS 271 (447)
T ss_pred HHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCcccCCCCEEEECCCcCCCCCC
Confidence 89999999989999999998 8899999999999999999999998 544 44554455677999999976664
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHH-------------------------hhhh--cCCCCC--HH---hHHHHHccc--
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYF-------------------------LQNA--EGSGLA--PF---DCWICLRGV-- 247 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~-------------------------~~~~--~~~~~~--~~---~~~~~~~~l-- 247 (301)
++|| +.|+++.+++.+ +.+.. .... ..+... .. .++..+..+
T Consensus 272 ~~Gp---g~G~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~ 347 (447)
T PRK00451 272 FGGP---YLGFFATRKKLV-RQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGP 347 (447)
T ss_pred CCCC---CchHHHhhHHHH-hhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCH
Confidence 4444 468888775433 32100 0000 111111 11 111112212
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 248 KTMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
..+++..+++.++++++.+.|++++++.
T Consensus 348 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~ 375 (447)
T PRK00451 348 EGLRELAEQNHQKAHYLAERLAEIGGVE 375 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 2356777888999999999999887654
No 240
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.81 E-value=5.2e-18 Score=150.85 Aligned_cols=209 Identities=19% Similarity=0.105 Sum_probs=146.1
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+++++++++++|.+ ..+++++|++++. ++..+. +++++|+++++.|.++. ..++..|++++.++.+
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~~ 136 (371)
T PRK13520 61 EEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDDD 136 (371)
T ss_pred HHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCCC
Confidence 578999999999976 3567777788875 433332 35789999999988765 4556678888888753
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc--------CccCCCCcEEEe
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADIVMH 196 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~--------~~~~~~~di~~~ 196 (301)
|++++++++++++++|++.+++|++|.+.|+++|.++|+++|+++++|++|+.+... .....++|.+..
T Consensus 137 ~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~ 216 (371)
T PRK13520 137 YRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITI 216 (371)
T ss_pred CcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEE
Confidence 799999999888888888888999999999999999999999999999999865421 111246899999
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHhhhh-c-------CCCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-E-------GSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQK 263 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~ 263 (301)
|.+|+..+|. +.|+++.+++.+.+.+...... . ..+.+......+..+++ .+++++++..+++++
T Consensus 217 s~~K~~~a~~--~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~ 294 (371)
T PRK13520 217 DPHKMGLAPI--PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRW 294 (371)
T ss_pred CCccccCccC--CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHH
Confidence 9999864443 3566666555554543211110 0 01112222222222332 245567788888888
Q ss_pred HHHHHHhC
Q 022194 264 IAEFLASH 271 (301)
Q Consensus 264 l~~~l~~~ 271 (301)
+.+.|++.
T Consensus 295 l~~~L~~~ 302 (371)
T PRK13520 295 LAEELKER 302 (371)
T ss_pred HHHHHHhC
Confidence 99988875
No 241
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=7.2e-19 Score=150.82 Aligned_cols=265 Identities=21% Similarity=0.229 Sum_probs=183.5
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-CCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-ADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~-~~~~i~~~sG~~ai~~~~ 87 (301)
.++|||.++ -.-+|..+|.++.+-. .+.+..-..+.. +-++.+.++.+.|.+..+ .+.+++.+||+||+.+.+
T Consensus 42 ~~YlDf~~Giav~~lGH~hP~iv~al~-~Q~~kl~h~sn~---~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAi 117 (404)
T COG4992 42 REYLDFAAGIAVNNLGHCHPALVEALK-EQAEKLWHVSNL---FYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAAL 117 (404)
T ss_pred CEeeeeccceeeeccCCCCHHHHHHHH-HHHHHhhhcccc---cCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHH
Confidence 478888522 2348877666555543 332211111111 235679999999999996 888999999999996544
Q ss_pred hcc----C-C-CCeEEEcCCCCccHHHH---------HhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCc
Q 022194 88 HLL----G-T-GEEIVAGDDLYGGTDRL---------LSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPR 152 (301)
Q Consensus 88 ~~~----~-~-g~~Vlv~~~~y~~~~~~---------~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~ 152 (301)
.+. . + ..+|+.....||+-... +...+.-.--.++.++..|++++++++++++.+|+++..+...
T Consensus 118 KlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taAvivEPIQGEg 197 (404)
T COG4992 118 KLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAAVIVEPIQGEG 197 (404)
T ss_pred HHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhccCeEEEEEecccCCC
Confidence 432 2 1 34788888888875311 0111221222566677779999999999999999999999988
Q ss_pred ccccc----HHHHHHHHHHcCCEEEEeCCcCC----ccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 153 QQICD----IRKIAEMAHAHGALLLVDNSIMS----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 153 G~~~~----l~~l~~l~~~~~~~li~D~~~~~----~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
|.+.+ ++++.++|++||+++|.||++.. |.+.....+|....+.++.|.++| |+..|.++++ +.....+
T Consensus 198 GV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgG--G~PigA~la~-~~~~~~~ 274 (404)
T COG4992 198 GVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGG--GFPIGAMLAT-EEIASAF 274 (404)
T ss_pred CCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccC--CccceeeEEc-hhhhhcC
Confidence 88864 89999999999999999999863 333334455676777779999975 3778888887 5555545
Q ss_pred HHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh----CCCcceEecCCC
Q 022194 225 YFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGL 282 (301)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~----~~~v~~v~~p~~ 282 (301)
....+.++.+-+|.++++....++.+ +...++..+...++.+.|++ .+.++.|+.-||
T Consensus 275 ~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GL 338 (404)
T COG4992 275 TPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGL 338 (404)
T ss_pred CCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeeccee
Confidence 55666677778899988888887765 23445556666666666665 344677777776
No 242
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.80 E-value=6e-18 Score=150.55 Aligned_cols=210 Identities=16% Similarity=0.072 Sum_probs=143.0
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc------CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL------GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~------~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~ 127 (301)
.+++++++++++|.+ +.+++++|++++. ++..+. ++||+|+++++.|.++. ..++..|++++.++.+
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v~~~ 136 (373)
T TIGR03812 61 EEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYAPLD 136 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEEeeC
Confidence 688999999999986 4567777787764 333332 46789999999998765 5566778888888753
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-----------CccCCCC
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----------RPLELGA 191 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-----------~~~~~~~ 191 (301)
|++++++++.+++..+++..++||+|.+.|+++|.++|+++|+++|+|++|+.+... +....+.
T Consensus 137 ~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~ 216 (373)
T TIGR03812 137 EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV 216 (373)
T ss_pred CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC
Confidence 799999998877655555558899999999999999999999999999999754321 1112367
Q ss_pred cEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh-cC-------CCCCHHhHHHHHccccc-----HHHHHHHHH
Q 022194 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EG-------SGLAPFDCWICLRGVKT-----MALRVEKQQ 258 (301)
Q Consensus 192 di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~l~~-----~~~~~~~~~ 258 (301)
|.+..|.||+..+|. +.|+++..++.+.+.+...... .. .+.+......+...++. +++..++..
T Consensus 217 d~~~~s~~K~~~~~~--~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~ 294 (373)
T TIGR03812 217 QSITIDPHKMGLSPI--PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECM 294 (373)
T ss_pred CEEEECccccCCCcC--CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 899999999654443 3454544444554443211111 01 11222223333333332 345678888
Q ss_pred HHHHHHHHHHHhCC
Q 022194 259 DNAQKIAEFLASHP 272 (301)
Q Consensus 259 ~~~~~l~~~l~~~~ 272 (301)
++++++++.|++++
T Consensus 295 ~~~~~l~~~L~~~g 308 (373)
T TIGR03812 295 ENTRYLVEELKKIG 308 (373)
T ss_pred HHHHHHHHHHHhCC
Confidence 88999999998864
No 243
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.80 E-value=4.1e-18 Score=155.60 Aligned_cols=161 Identities=24% Similarity=0.345 Sum_probs=124.7
Q ss_pred CCch-HHHHHHHHHhhcCCCceEEe-cchHHH-HHH---HH-hccCCCC----eEEEcCCCCccHHHHHhhhcccCCcEE
Q 022194 53 GNPT-RDALESLLAKLDKADRALCF-TSGMAA-LAA---VT-HLLGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (301)
Q Consensus 53 g~~~-~~~l~~~l~~~~~~~~~i~~-~sG~~a-i~~---~~-~~~~~g~----~Vlv~~~~y~~~~~~~~~~~~~~g~~~ 121 (301)
|... +.++++++++++|.+++.+. ++|+.+ +.+ +. .++++|| +|+++++.|+.+.. .++..|+++
T Consensus 110 G~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~----~~~~~G~~v 185 (481)
T PRK04366 110 GALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPA----SAAMAGFKV 185 (481)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHH----HHHHcCCEE
Confidence 4434 88899999999999865555 556533 332 22 2356666 99999999998874 456688899
Q ss_pred EEecCC-----CHHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCccc--cCccCCCCcE
Q 022194 122 KRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADI 193 (301)
Q Consensus 122 ~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~-~~l~~l~~l~~~~~~~li~D~~~~~~~~--~~~~~~~~di 193 (301)
+.++.+ |++++++++.+++++|++++|+ ++|.+ .|+++|+++|+++|+++++|+++..+.. ..+.+.|+|+
T Consensus 186 v~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~ 264 (481)
T PRK04366 186 VEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDV 264 (481)
T ss_pred EEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCE
Confidence 888763 7899999999899999999988 89987 5899999999999999999999874422 2567789999
Q ss_pred EEecccccccCCCCc---eeeEEEEcch
Q 022194 194 VMHSATKFIAGHSDV---MAGVLAVKGE 218 (301)
Q Consensus 194 ~~~S~sK~~~g~~g~---~~g~~~~~~~ 218 (301)
+++|.||+|++|.|. -.|+++++++
T Consensus 265 ~~~~~hK~l~~P~g~Ggp~~G~l~~~~~ 292 (481)
T PRK04366 265 VHLNLHKTFSTPHGGGGPGSGPVGVKEE 292 (481)
T ss_pred EEEechhhcCCCCCCCCCCeeeeeehhh
Confidence 999999999766322 3578877754
No 244
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.79 E-value=1.4e-17 Score=140.20 Aligned_cols=216 Identities=24% Similarity=0.314 Sum_probs=143.1
Q ss_pred chHHHHHHHHHhhcCCCceEE---ecchHHHHH-HHHhccCCCCeEE-EcCCCCccHHHHH------hhhcccCCcEEEE
Q 022194 55 PTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIV-AGDDLYGGTDRLL------SRVTPKTGVVVKR 123 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~---~~sG~~ai~-~~~~~~~~g~~Vl-v~~~~y~~~~~~~------~~~~~~~g~~~~~ 123 (301)
..|+.|++-+++.|+++++++ +.|||+||+ ++..+++|||+++ +...-|.....++ ...++.+|+.+..
T Consensus 54 ~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~ 133 (403)
T PF06838_consen 54 IGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYRE 133 (403)
T ss_dssp HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE
T ss_pred ccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEE
Confidence 349999999999999999998 589999996 8889999999988 4556787776555 2456788999999
Q ss_pred ecCC-----CHHHHHhhcCCCceEEEEeC-C---CCCccccccHHHHHHHHHHc--CCEEEEeCCcCCccc-cCccCCCC
Q 022194 124 VNTC-----DLDEVASAIGPWTKLVWVES-P---TNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVL-SRPLELGA 191 (301)
Q Consensus 124 ~~~~-----d~~~l~~~l~~~~~~v~i~~-~---~np~G~~~~l~~l~~l~~~~--~~~li~D~~~~~~~~-~~~~~~~~ 191 (301)
+++. |.+.+++++++++++|+++- . ..|+-.+.+++++++++|+. +++++||+||+..+. ..|.+.|+
T Consensus 134 v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vGA 213 (403)
T PF06838_consen 134 VPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEVGA 213 (403)
T ss_dssp --B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT-
T ss_pred EeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccccch
Confidence 9975 89999999999999999972 2 33444556788888888875 689999999998875 47889999
Q ss_pred cEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcC----CCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHH
Q 022194 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG----SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 192 di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 267 (301)
|++.+|+-|..||.-..-+|+++++. ++.++.....+..| .+.+......+.+++-.....+.+..+-+......
T Consensus 214 Dl~aGSLIKNpGGgiAptGGYIaGr~-~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlFlAP~vV~eAlKgaif~A~~ 292 (403)
T PF06838_consen 214 DLMAGSLIKNPGGGIAPTGGYIAGRK-DLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLFLAPHVVGEALKGAIFAAAL 292 (403)
T ss_dssp SEEEEETTSGGGTTT-SS-EEEEESH-HHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeccceeCCCCCccCcCCEEechH-HHHHHHHhhhcCCccccccccCcchHHHHHhHHhhchHHHHHHHHHHHHHHHH
Confidence 99999999999876554578998885 55565544444333 22333334455555544455555556666555556
Q ss_pred HHhC
Q 022194 268 LASH 271 (301)
Q Consensus 268 l~~~ 271 (301)
++++
T Consensus 293 fe~l 296 (403)
T PF06838_consen 293 FEKL 296 (403)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 6554
No 245
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.79 E-value=5.3e-18 Score=152.30 Aligned_cols=251 Identities=15% Similarity=0.129 Sum_probs=156.2
Q ss_pred ceeeecCCCCCCCCcc---ccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEFDPYGAL---STPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~---~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~ 87 (301)
..++||.+ +|.+.. ++|.+......+.+ ...+....+..+..+++++.++++++.+.+++++||++|+..++
T Consensus 31 ~~~lD~~~--~~~~~~~Gh~~p~v~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al 105 (400)
T PTZ00125 31 KKYYDFLS--AYSAVNQGHCHPKILAALINQAQ---KLTLTSRAFYNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETAL 105 (400)
T ss_pred CEEEEccc--CHhhccCCcCCHHHHHHHHHHHH---hcccccccccCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHH
Confidence 46888873 454443 45555544322211 11111111123558889999999998888999999999886443
Q ss_pred hcc-----------CCCCeEEEcCCCCccHHHHHhhhccc---------CCcEEEEecCCCHHHHHhhcC-CCceEEEEe
Q 022194 88 HLL-----------GTGEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIG-PWTKLVWVE 146 (301)
Q Consensus 88 ~~~-----------~~g~~Vlv~~~~y~~~~~~~~~~~~~---------~g~~~~~~~~~d~~~l~~~l~-~~~~~v~i~ 146 (301)
.++ ..+++|+..+..||+.....-..... ....+..++..|++++++.+. +++++|+++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e 185 (400)
T PTZ00125 106 KFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE 185 (400)
T ss_pred HHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence 332 13578999999998875332111111 001234455568999999996 679999999
Q ss_pred CCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccC---ccCCC--CcEEEecccccccCCCCceeeEEEEc
Q 022194 147 SPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR---PLELG--ADIVMHSATKFIAGHSDVMAGVLAVK 216 (301)
Q Consensus 147 ~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~---~~~~~--~di~~~S~sK~~~g~~g~~~g~~~~~ 216 (301)
+++||+|.+.+ +++|.++|++||+++|+||+|+. +.... ....+ .|++ +++|++++ ++.+.|+++++
T Consensus 186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~--~~sK~l~~-g~~~ig~v~~~ 262 (400)
T PTZ00125 186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV--LLGKALSG-GLYPISAVLAN 262 (400)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE--EEcccccC-CCcCcEEEEEc
Confidence 99999999987 99999999999999999999863 21111 11123 3554 47899954 33468898887
Q ss_pred chhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 217 GERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
++ +.+.+.........+.++..+.++...++.+. ...++..+..+.+++.|++
T Consensus 263 ~~-~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~ 317 (400)
T PTZ00125 263 DD-VMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKE 317 (400)
T ss_pred HH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 54 44543332223334456666666655555432 2334444555566666654
No 246
>PLN03032 serine decarboxylase; Provisional
Probab=99.79 E-value=7.8e-18 Score=147.75 Aligned_cols=217 Identities=16% Similarity=0.150 Sum_probs=152.3
Q ss_pred HHHHHHHHHhhcCCC--ce--EEecchHHHHH-HHHhc--cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD--RA--LCFTSGMAALA-AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~--i~~~sG~~ai~-~~~~~--~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+++.+++++++|.+ +. +++++||+++. ++... ..++..|+++.-.|+++.+. ++..+..++.++.+
T Consensus 68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~ka----a~~lg~~~~~V~~d~~ 143 (374)
T PLN03032 68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMEAVKVPTLPS 143 (374)
T ss_pred HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHH----HHHcCCCCeEeeeCCC
Confidence 678889999999875 33 77888898874 44332 23456899999999988744 44444555555543
Q ss_pred ---CHHHHHhhcCC---CceEEEEeCCCCCccccccHHHHHHHHHHcC-----CEEEEeCCcCCccccC-------ccCC
Q 022194 128 ---DLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAEMAHAHG-----ALLLVDNSIMSPVLSR-------PLEL 189 (301)
Q Consensus 128 ---d~~~l~~~l~~---~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~-----~~li~D~~~~~~~~~~-------~~~~ 189 (301)
|++++++++++ ++.+|+++..+|++|.+.|+++|+++|+++| +|+++|.+++.+..+- ....
T Consensus 144 g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~ 223 (374)
T PLN03032 144 GEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRK 223 (374)
T ss_pred CcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCc
Confidence 89999999975 5778888999999999999999999999996 5999999998765431 1223
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh--------hcC--CCCCHHhHHHHHcc--cccHHHHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--------AEG--SGLAPFDCWICLRG--VKTMALRVEKQ 257 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~--l~~~~~~~~~~ 257 (301)
++|.++.|.||+++.|.| .|+++.+++.+ +.+..... ..+ .+......|+.+.. .+.+.+..++.
T Consensus 224 ~vDSis~s~HK~~g~P~g--~G~ll~r~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~ 300 (374)
T PLN03032 224 PIGSVSVSGHKFLGCPMP--CGVALTRKKHV-KALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHC 300 (374)
T ss_pred CCcEEEECcccccCCCcC--eEEEEEEchhh-HhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 689999999999866877 58888886443 32211000 011 11223445555443 34578888999
Q ss_pred HHHHHHHHHHHHhCCCcceEecCC
Q 022194 258 QDNAQKIAEFLASHPRVKKVNYAG 281 (301)
Q Consensus 258 ~~~~~~l~~~l~~~~~v~~v~~p~ 281 (301)
.++++++.+.|++. ++..+..|.
T Consensus 301 ~~~a~~l~~~l~~~-~~~~~~~p~ 323 (374)
T PLN03032 301 MRNAHYLKDRLTEA-GLTCRLNEL 323 (374)
T ss_pred HHHHHHHHHHHHhC-CCcEEECCC
Confidence 99999999999885 344444443
No 247
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.78 E-value=1.6e-17 Score=149.34 Aligned_cols=149 Identities=16% Similarity=0.226 Sum_probs=113.5
Q ss_pred hhcCCC--ceEEecchHHHHHH-HHhccCCC---CeEEEcCCCCccHHHHHhhhcccCCcEE----EEecCC-----CHH
Q 022194 66 KLDKAD--RALCFTSGMAALAA-VTHLLGTG---EEIVAGDDLYGGTDRLLSRVTPKTGVVV----KRVNTC-----DLD 130 (301)
Q Consensus 66 ~~~~~~--~~i~~~sG~~ai~~-~~~~~~~g---~~Vlv~~~~y~~~~~~~~~~~~~~g~~~----~~~~~~-----d~~ 130 (301)
+++|++ +.++++++|++++. +..+++++ +.|++++..|++....|...++..|+++ +.++.+ +++
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 159 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLE 159 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHH
Confidence 778865 45555556788874 45556654 3688888999987665655556667776 445432 677
Q ss_pred HHHhhc---CCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccCCC
Q 022194 131 EVASAI---GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHS 206 (301)
Q Consensus 131 ~l~~~l---~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g~~ 206 (301)
++++.+ .+++++|++++++|.+|.+.|+++|+++||++|+++++|++++.|..+ +....++|++++|.||++.||+
T Consensus 160 ~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~p 239 (406)
T TIGR01814 160 DILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGP 239 (406)
T ss_pred HHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCC
Confidence 887776 368999999999999999999999999999999999999999999865 3446789999999999997766
Q ss_pred CceeeEEEEc
Q 022194 207 DVMAGVLAVK 216 (301)
Q Consensus 207 g~~~g~~~~~ 216 (301)
| +++++.+
T Consensus 240 G--~~l~v~~ 247 (406)
T TIGR01814 240 G--AGAFVHE 247 (406)
T ss_pred C--eEEEEeh
Confidence 5 4434333
No 248
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=1.6e-17 Score=148.05 Aligned_cols=252 Identities=18% Similarity=0.124 Sum_probs=160.4
Q ss_pred ceeeecCC--CCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~--~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
.+++||.+ .++++|..+ |.+..+...+.+. .........++...++.+.+.+..+.+.+++++||++|+.+++.
T Consensus 36 ~~~lD~~sg~~~~~lGh~~-p~v~~a~~~q~~~---~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik 111 (395)
T PRK03715 36 KRYLDFIQGWAVNCLGHCN-PGMVEALAAQAEK---LINPSPAFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIK 111 (395)
T ss_pred CEEEECCcChhhccCCCCC-HHHHHHHHHHHHh---cccccccccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHH
Confidence 48899974 488999996 4444433222111 11111112334567788888877666789999999999864444
Q ss_pred ccC-------C-CCeEEEcCCCCccHHHHHhhhcccCC---------cEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 89 LLG-------T-GEEIVAGDDLYGGTDRLLSRVTPKTG---------VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 89 ~~~-------~-g~~Vlv~~~~y~~~~~~~~~~~~~~g---------~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
+++ + .++|+..+..||+.....-....... ..+...+..|++++++.+.+++++|+++...+.
T Consensus 112 ~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~ 191 (395)
T PRK03715 112 LARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGE 191 (395)
T ss_pred HHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCC
Confidence 332 2 36788889999987533212111110 112223345889999999888999999988888
Q ss_pred cccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccC---ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 152 RQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 152 ~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
.|...+ +++|.++|++||+++|+||+++. |..+. ....+....+.+++|.+++ |+..|.++++++. ..
T Consensus 192 gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg~--G~p~~av~~~~~i-~~- 267 (395)
T PRK03715 192 GGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIGG--GVPLAALLAKAEV-AV- 267 (395)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhhC--CcceEEEEEcccc-cc-
Confidence 888876 99999999999999999999873 11221 1223333345668999975 3557777777553 22
Q ss_pred HHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 224 LYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
........+...++..+++++..++.+. +..++..++.+++++.|++
T Consensus 268 ~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~ 316 (395)
T PRK03715 268 FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLE 316 (395)
T ss_pred ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 1111122333456777777777777653 3556777777778777764
No 249
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.77 E-value=3e-17 Score=147.02 Aligned_cols=215 Identities=16% Similarity=0.090 Sum_probs=149.9
Q ss_pred HHHHHHHHHhhcCCC----ceEE--ecchHHHHH-HHHhcc--------CC-----CCeEEEcCCCCccHHHHHhhhccc
Q 022194 57 RDALESLLAKLDKAD----RALC--FTSGMAALA-AVTHLL--------GT-----GEEIVAGDDLYGGTDRLLSRVTPK 116 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~----~~i~--~~sG~~ai~-~~~~~~--------~~-----g~~Vlv~~~~y~~~~~~~~~~~~~ 116 (301)
.+++++++++++|.+ +..+ +++||+|+. ++.... +. +..|++++-.|.++. +.++.
T Consensus 82 e~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~----ka~~~ 157 (431)
T TIGR01788 82 ENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWE----KFARY 157 (431)
T ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHH----HHHHH
Confidence 777889999999876 3443 467788874 443321 11 236889999998886 44455
Q ss_pred CCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc------CCEEEEeCCcCCccc-
Q 022194 117 TGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH------GALLLVDNSIMSPVL- 183 (301)
Q Consensus 117 ~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~------~~~li~D~~~~~~~~- 183 (301)
.|++++.++.+ |++++++++++++.+|+++..+|.+|.+.|+++|+++|+++ |+|+++|.+++.+..
T Consensus 158 lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p 237 (431)
T TIGR01788 158 FDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAP 237 (431)
T ss_pred cCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHH
Confidence 67777776653 78899999998999999999999999999999999999999 999999999984432
Q ss_pred ------c-CccCCCCcEEEecccccccCCCCceeeEEEEcchh-HHHHHHH----hhhhc---C--CCC---CHHhHHHH
Q 022194 184 ------S-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYF----LQNAE---G--SGL---APFDCWIC 243 (301)
Q Consensus 184 ------~-~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~-~~~~~~~----~~~~~---~--~~~---~~~~~~~~ 243 (301)
. +....++|.+..|.||++.+|.| .|+++.+++. +...+.. ..... + .+- .....|..
T Consensus 238 ~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~ 315 (431)
T TIGR01788 238 FVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN 315 (431)
T ss_pred HhCCCchhhcCCCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHH
Confidence 1 12234789999999999878887 4888877653 2222110 00000 0 000 11223444
Q ss_pred Hccc--ccHHHHHHHHHHHHHHHHHHHHhCCCcceE
Q 022194 244 LRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (301)
Q Consensus 244 ~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v 277 (301)
+..+ .-+++..++..++++++.+.|++.+.++.+
T Consensus 316 l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~ 351 (431)
T TIGR01788 316 FLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII 351 (431)
T ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe
Confidence 3333 235777788999999999999988766443
No 250
>PLN02271 serine hydroxymethyltransferase
Probab=99.76 E-value=1.6e-16 Score=142.80 Aligned_cols=230 Identities=20% Similarity=0.243 Sum_probs=151.8
Q ss_pred CCchHHHHH----HHHHhhcCCCc-----eEEecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHh-----hhcccC
Q 022194 53 GNPTRDALE----SLLAKLDKADR-----ALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLS-----RVTPKT 117 (301)
Q Consensus 53 g~~~~~~l~----~~l~~~~~~~~-----~i~~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~-----~~~~~~ 117 (301)
|....++++ ++..++|+++. .+-.-||+.|. .++.++++|||+|+..+..|+++..... ..+...
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~s 267 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGA 267 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccc
Confidence 444455554 55667788653 23445898776 5778899999999999998888864321 122344
Q ss_pred CcEEEEec--CC------CHHHHHh-hcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc----
Q 022194 118 GVVVKRVN--TC------DLDEVAS-AIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (301)
Q Consensus 118 g~~~~~~~--~~------d~~~l~~-~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~---- 184 (301)
|+.+..++ .+ |.+++++ +...++++|++....+| ...|+++++++|+++|+++++|.+|..|...
T Consensus 268 G~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~ 345 (586)
T PLN02271 268 SIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKEC 345 (586)
T ss_pred cceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcC
Confidence 55544444 32 8899998 55689999999888887 6789999999999999999999999877653
Q ss_pred -CccCCCCcEEEecccccccCCCCceeeEEEEcch-------------------hHHHHHHHhhh--hcCCCCCHHhHHH
Q 022194 185 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-------------------RLAKELYFLQN--AEGSGLAPFDCWI 242 (301)
Q Consensus 185 -~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~-------------------~~~~~~~~~~~--~~~~~~~~~~~~~ 242 (301)
.+.. ++|++++|.||++.||. +|+++.+++ .+.+++..... ..+.... ...++
T Consensus 346 ~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn-~~IAa 420 (586)
T PLN02271 346 VNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHN-NHIAA 420 (586)
T ss_pred CCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhH-HHHHH
Confidence 3444 59999999999999885 577777643 12222211111 1111111 11112
Q ss_pred H---Hc--ccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhh
Q 022194 243 C---LR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 294 (301)
Q Consensus 243 ~---~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~ 294 (301)
. ++ ....+.++.++..+|++.|.+.|.+. ++..+. ..+-+|.+++..
T Consensus 421 lAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~----ggTdnHlvLvDl 472 (586)
T PLN02271 421 LAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVT----GGTDNHLLLWDL 472 (586)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEee----CCCCcceeeecC
Confidence 1 11 23346788899999999999999876 333332 223345555444
No 251
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.76 E-value=7.3e-17 Score=144.23 Aligned_cols=206 Identities=19% Similarity=0.157 Sum_probs=138.8
Q ss_pred HHHHHhhcCCCce-EEecchHHHH-HHHHhccCC-------------------------------CCeEEEcCCCCccHH
Q 022194 61 ESLLAKLDKADRA-LCFTSGMAAL-AAVTHLLGT-------------------------------GEEIVAGDDLYGGTD 107 (301)
Q Consensus 61 ~~~l~~~~~~~~~-i~~~sG~~ai-~~~~~~~~~-------------------------------g~~Vlv~~~~y~~~~ 107 (301)
.+++.++|+++.+ +=.-||+.|. .++.++++| ||+|+..++.++++.
T Consensus 101 ~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHl 180 (493)
T PRK13580 101 AEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHL 180 (493)
T ss_pred HHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCee
Confidence 3566678998853 3356788776 577778876 799998877665553
Q ss_pred HHH-hhhcccCCcEEEEecC------CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCC
Q 022194 108 RLL-SRVTPKTGVVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS 180 (301)
Q Consensus 108 ~~~-~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~ 180 (301)
..- ...+......+..... .|.+++++.+++.++.|++++.+|- +...|+++|.++|+++|+++++|++|+.
T Consensus 181 thg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~ 259 (493)
T PRK13580 181 THGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFA 259 (493)
T ss_pred ecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhh
Confidence 110 0000000122222222 2889999999988888888888886 5578999999999999999999999998
Q ss_pred ccccCcc-------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh-hhhcCCCCCHHhHHHHHcccc----
Q 022194 181 PVLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAEGSGLAPFDCWICLRGVK---- 248 (301)
Q Consensus 181 ~~~~~~~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~---- 248 (301)
|.+.... ..++|++++|+||++.|| ++|++++++ .+.+.+... ....++..++..++.+....+
T Consensus 260 Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP---~GG~I~~~~-~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ 335 (493)
T PRK13580 260 GLVAGKVFTGDEDPVPHADIVTTTTHKTLRGP---RGGLVLAKK-EYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTP 335 (493)
T ss_pred ceeccccchhhcCCCCCCcEEEeCChhhccCC---CeEEEEecH-HHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCc
Confidence 7764111 236899999999999776 468888875 454544222 223334445543333322111
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 249 TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
...++++++.+|+++|++.|++.
T Consensus 336 ef~~y~~~l~~Na~~La~~L~~~ 358 (493)
T PRK13580 336 EFQKYAQQVVDNARALAEGFLKR 358 (493)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhc
Confidence 23557899999999999999874
No 252
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.75 E-value=2e-16 Score=139.52 Aligned_cols=211 Identities=18% Similarity=0.169 Sum_probs=150.3
Q ss_pred CCchHHHHHHHHHhhcCCCceEEecchHHHHHHH-HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~-~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
|+++..++++.+++++|.+.++.+++|+.|+..+ ...++|||.| +.+.|..... ......|..+..++.+
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~---ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTR---YHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHH---HHHHhCCeEEEeeecccccc
Confidence 6788999999999999999999999999997643 4468999977 5566644432 3235566666666221
Q ss_pred -----------CHHHHHhhcCC----CceEEEEeCCCCCc-cccc---cHHHHHHHHHHcCCEEEEeCCcCCcc-c----
Q 022194 128 -----------DLDEVASAIGP----WTKLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDNSIMSPV-L---- 183 (301)
Q Consensus 128 -----------d~~~l~~~l~~----~~~~v~i~~~~np~-G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~-~---- 183 (301)
|++++++++++ ++++|.++.++|.. |... ++++|.++|++||+.+|.|.++..+- +
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~ 223 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKE 223 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhc
Confidence 79999999974 45578888888865 6773 58999999999999999999987631 1
Q ss_pred ------cCcc-------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcC-----CCCCHHhHHHHHc
Q 022194 184 ------SRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-----SGLAPFDCWICLR 245 (301)
Q Consensus 184 ------~~~~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 245 (301)
..+. ...+|.++.|..|..++| ++|+++.+++.+.++.+......+ .+++.....++..
T Consensus 224 re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~ 300 (450)
T TIGR02618 224 REQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAI 300 (450)
T ss_pred ccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHH
Confidence 1111 225899999999999776 469999899999888776654432 2233333333333
Q ss_pred ccccH-H-HHHHHHHHHHHHHHHHHHhC
Q 022194 246 GVKTM-A-LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 246 ~l~~~-~-~~~~~~~~~~~~l~~~l~~~ 271 (301)
++++. + ...+....++++|.+.|.+.
T Consensus 301 gL~e~~~~~y~~~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 301 GIREAVDYEYIEHRVKQVRYLGDKLKAA 328 (450)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 44432 2 34455566788999999875
No 253
>PRK15029 arginine decarboxylase; Provisional
Probab=99.75 E-value=4.3e-17 Score=152.96 Aligned_cols=210 Identities=12% Similarity=0.090 Sum_probs=151.6
Q ss_pred HHHHHHHHHhhcCCCceEEecchH-HHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------
Q 022194 57 RDALESLLAKLDKADRALCFTSGM-AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~-~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------- 127 (301)
..+.++.+++.||+++..++++|| .++ .++++++++||+|++++++|-+.. ..+...|+..+++.+.
T Consensus 207 I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~----~al~L~ga~Pvyl~P~~~~~Gi~ 282 (755)
T PRK15029 207 FGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE----QGLILTGAKPVYMVPSRNRYGII 282 (755)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeEEEecccccccCCc
Confidence 889999999999999999999996 556 588889999999999999998887 4556778888888643
Q ss_pred ---C-----HHHHHhhcCC--Cce--------EEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc-----cc
Q 022194 128 ---D-----LDEVASAIGP--WTK--------LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LS 184 (301)
Q Consensus 128 ---d-----~~~l~~~l~~--~~~--------~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~-----~~ 184 (301)
+ .+.+++++.. ..+ ++++++|++ .|.+.++++|+++|++++++|++||+|+... ++
T Consensus 283 ~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p 361 (755)
T PRK15029 283 GPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYA 361 (755)
T ss_pred cCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCcccc
Confidence 3 7888888752 233 899999999 7999999999999999999999999997532 21
Q ss_pred --Ccc-----C-CCCc-EEEecccccccCCCCceeeEEEEcch--hH-HHHHHHhhhhcCCCCCHHhHHH----HHcccc
Q 022194 185 --RPL-----E-LGAD-IVMHSATKFIAGHSDVMAGVLAVKGE--RL-AKELYFLQNAEGSGLAPFDCWI----CLRGVK 248 (301)
Q Consensus 185 --~~~-----~-~~~d-i~~~S~sK~~~g~~g~~~g~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~l~ 248 (301)
... . .|+| +++.|.||++++.. +++++..+.. .+ .+++........++.+.....+ +.+.++
T Consensus 362 ~~sa~~~~~~~~~Gad~~vvqStHKtL~alT--QaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~ 439 (755)
T PRK15029 362 DHYAMRGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMD 439 (755)
T ss_pred ccccccccccccCCCceEEEEchhhcccchh--hhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh
Confidence 112 2 6888 99999999997764 5788887554 12 2334444443333333322211 111121
Q ss_pred c--HHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 249 T--MALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 249 ~--~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
. -.+..++..+.+..+++.+++.+.
T Consensus 440 ~~~G~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 440 GNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 1 133456677778888888877653
No 254
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.75 E-value=2e-16 Score=143.74 Aligned_cols=205 Identities=17% Similarity=0.118 Sum_probs=136.9
Q ss_pred HHHHHHhhcCCC-ceE-Ee---cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcc------cCCcEEEEecCC
Q 022194 60 LESLLAKLDKAD-RAL-CF---TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP------KTGVVVKRVNTC 127 (301)
Q Consensus 60 l~~~l~~~~~~~-~~i-~~---~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~------~~g~~~~~~~~~ 127 (301)
.++.++++++++ +.+ +. +||+++.. ++.+++++||+|++.+..|+++...+....+ ....++..++.+
T Consensus 85 ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~ 164 (452)
T PTZ00094 85 CQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN 164 (452)
T ss_pred HHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC
Confidence 446888999986 233 22 57888875 5788899999999998888887543321111 111333343333
Q ss_pred -----CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-----ccCCCCcEEEe
Q 022194 128 -----DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLELGADIVMH 196 (301)
Q Consensus 128 -----d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~~~~~di~~~ 196 (301)
|.+++++.++. ++++|++. ++.+|...|+++|.++|+++|+++++|++|+.|.... +. .++|++++
T Consensus 165 ~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~-~~~D~l~~ 241 (452)
T PTZ00094 165 EKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF-PYADVVTT 241 (452)
T ss_pred CCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC-CCCcEEEc
Confidence 89999999853 56777664 3348999999999999999999999999999887632 32 37999999
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHhh--hh---cCCCCCHHhHHHHHcccccH-----HHHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NA---EGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAE 266 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~ 266 (301)
|+|||+.||. +|+++++++. ...+.... .. ...+.+....+++..+++.+ .+..++..++++++.+
T Consensus 242 S~hK~l~GP~---Gg~l~~~~~~-~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~ 317 (452)
T PTZ00094 242 TTHKSLRGPR---SGLIFYRKKV-KPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAA 317 (452)
T ss_pred CCccCCCCCC---ceEEEEeccc-chHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH
Confidence 9999998875 4777776542 22111111 11 11233444444444444433 4566788888999999
Q ss_pred HHHhC
Q 022194 267 FLASH 271 (301)
Q Consensus 267 ~l~~~ 271 (301)
.|++.
T Consensus 318 ~L~~~ 322 (452)
T PTZ00094 318 ALEKR 322 (452)
T ss_pred HHHhC
Confidence 98774
No 255
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.74 E-value=3.2e-16 Score=126.22 Aligned_cols=214 Identities=19% Similarity=0.174 Sum_probs=162.7
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------ 127 (301)
|....+.+.+++++|++.+.++.+..++= ..+.+++++||.|++...+|++.. -.+++.|+.+..++..
T Consensus 61 PpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYtty----vAAEragl~v~eVp~tg~Pey~ 136 (382)
T COG1103 61 PPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTY----VAAERAGLNVAEVPNTGYPEYK 136 (382)
T ss_pred CcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHH----HHHHhcCCeEEecCCCCCCceE
Confidence 55666777799999999777777777885 577789999999999999988876 6678899999999954
Q ss_pred -CHHHHHhhcC-------CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecc
Q 022194 128 -DLDEVASAIG-------PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 198 (301)
Q Consensus 128 -d~~~l~~~l~-------~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~ 198 (301)
+++...+.+. +.+.+.+++++...-|.+.|.+.++++|+++|++++...+|..|.++ +..+.|+|++++|.
T Consensus 137 i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSG 216 (382)
T COG1103 137 ITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSG 216 (382)
T ss_pred ecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecC
Confidence 4544443332 35788999999999999999999999999999999999999999877 45677999999999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHhh---------hhcCCCCCHHhHHHHHcccccHHHHHHH---HHHHHHHHHH
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQ---------NAEGSGLAPFDCWICLRGVKTMALRVEK---QQDNAQKIAE 266 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~l~~ 266 (301)
||++.+.+ ..|++..+. ++.+.+.... ...|++.-......++.++....+|+++ -.++++++.+
T Consensus 217 HKsmAAs~--PiGvl~~~e-E~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~ 293 (382)
T COG1103 217 HKSMAASA--PIGVLAMSE-EWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVA 293 (382)
T ss_pred ccchhccC--CeeEEeehh-HHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99986543 368888874 4444332222 1244555445566677788877666655 4556777888
Q ss_pred HHHhCCCcc
Q 022194 267 FLASHPRVK 275 (301)
Q Consensus 267 ~l~~~~~v~ 275 (301)
.|+++.++.
T Consensus 294 elEkigg~~ 302 (382)
T COG1103 294 ELEKIGGVK 302 (382)
T ss_pred HHHHhhhHH
Confidence 888765544
No 256
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.74 E-value=1.6e-16 Score=142.69 Aligned_cols=251 Identities=15% Similarity=0.183 Sum_probs=159.4
Q ss_pred ceeeecCCCCCCCCcc---ccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEFDPYGAL---STPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~---~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~ 87 (301)
.+++||. + +|++.. ++|.+........+. ..........+...++++.++++++.+.+++++||++|+.+++
T Consensus 37 ~~~lD~~-s-~~~~~~~Gh~~p~v~~a~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai 111 (401)
T TIGR01885 37 KRYLDFL-S-AYSAVNQGHCHPKIVKALTEQAQK---LTLSSRAFYNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAI 111 (401)
T ss_pred CEEEEcc-c-CHhhccCCCCCHHHHHHHHHHHHh---ccccccccCCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHH
Confidence 4688988 3 476655 255555443222111 1111111234568899999999999888999999998885443
Q ss_pred hcc-----------CCCCeEEEcCCCCccHH-HHHhhhcc------cCC---cEEEEecCCCHHHHHhhcC---CCceEE
Q 022194 88 HLL-----------GTGEEIVAGDDLYGGTD-RLLSRVTP------KTG---VVVKRVNTCDLDEVASAIG---PWTKLV 143 (301)
Q Consensus 88 ~~~-----------~~g~~Vlv~~~~y~~~~-~~~~~~~~------~~g---~~~~~~~~~d~~~l~~~l~---~~~~~v 143 (301)
.++ ...+.|+.....||+.. ..+ .... ..+ ..+..++..|++++++.++ +++.+|
T Consensus 112 ~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~av 190 (401)
T TIGR01885 112 KLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAI-SMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAF 190 (401)
T ss_pred HHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHH-hCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEE
Confidence 331 22467778888888742 222 1111 111 2345556668888888875 467889
Q ss_pred EEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccCc-----cCCCCcEEEecccccccCCCCceeeEE
Q 022194 144 WVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVL 213 (301)
Q Consensus 144 ~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~~-----~~~~~di~~~S~sK~~~g~~g~~~g~~ 213 (301)
+++.+++++|...+ +++|.++|++||+++|+||+|.. +..... .....|+++ ++|.+++ ++.+.|++
T Consensus 191 i~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~--~gK~l~~-g~~~ig~v 267 (401)
T TIGR01885 191 IVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVL--LGKALSG-GVYPVSAV 267 (401)
T ss_pred EEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEE--eeccccC-CCCCcEEE
Confidence 99999999999986 99999999999999999999852 111111 122356554 7799964 44577888
Q ss_pred EEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 214 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.++ .+.+.+.........+.++..+.++...++.+. ...++..+..+++++.|+++
T Consensus 268 ~~~~-~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l 326 (401)
T TIGR01885 268 LADD-DVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKL 326 (401)
T ss_pred EEcH-HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc
Confidence 8764 455544322222233445666777767766653 24456667778888888875
No 257
>PLN02624 ornithine-delta-aminotransferase
Probab=99.74 E-value=1.3e-16 Score=145.30 Aligned_cols=254 Identities=11% Similarity=0.086 Sum_probs=154.9
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
.+++||.++- --+|..++.+..+.. .+.+. ..+....+.++...++++.|+++++.+.+++++||++|+.+.+.
T Consensus 75 ~~ylD~~sg~~~~~~Gh~~p~v~~ai~-~ql~~---~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk 150 (474)
T PLN02624 75 KKYLDFLSAYSAVNQGHCHPKIIKALT-EQAEK---LTLSSRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIK 150 (474)
T ss_pred CEEEEcccchhcccCCCCCHHHHHHHH-HHHHh---cCCcccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHH
Confidence 5788986321 125655555444432 22221 11111123456688899999999988889999999998864433
Q ss_pred ccC----------CC-CeEEEcCCCCccHHHHHhhhcccC---------CcEEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 89 LLG----------TG-EEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 89 ~~~----------~g-~~Vlv~~~~y~~~~~~~~~~~~~~---------g~~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
+.+ ++ ..|+.....||+.....-.+.... .-.+..++..|++.+++.++ +++++|++
T Consensus 151 lAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiii 230 (474)
T PLN02624 151 LARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLF 230 (474)
T ss_pred HHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 221 12 357777788888743211111000 01234455668899988885 56889999
Q ss_pred eCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccCc---cCCCCcEEEecccccccCCCCceeeEEEEcc
Q 022194 146 ESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (301)
Q Consensus 146 ~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~ 217 (301)
+.+++++|.+.| +++|.++|++||+++|+||+|.. +..+.. ...+....+.+++|.+++ ++++.|+++.+.
T Consensus 231 Epv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lgg-G~~pigav~~~~ 309 (474)
T PLN02624 231 EPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGG-GVIPVSAVLADK 309 (474)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccC-CCCcceeeeecH
Confidence 999999999876 99999999999999999999973 211111 112333334447899954 456788888764
Q ss_pred hhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHHh
Q 022194 218 ERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~ 270 (301)
.+...+.......+.+.++..+.++...++.+.+ ..++..++.+++++.|++
T Consensus 310 -~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~ 363 (474)
T PLN02624 310 -DVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQK 363 (474)
T ss_pred -HHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 4444333223333344567777777666665432 333444555555555544
No 258
>PLN00144 acetylornithine transaminase
Probab=99.73 E-value=2.2e-16 Score=140.40 Aligned_cols=262 Identities=17% Similarity=0.129 Sum_probs=161.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||.++ +.-+|..++.+..+.. .+.+ + ..+....+.++...++.+.|.+..+.+.+.+++||++|+.+.+.
T Consensus 15 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~-~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~Alk 90 (382)
T PLN00144 15 KEYLDMAAGIAVNALGHGDPDWVKAVA-EQAG--T-LAHVSNVYHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIK 90 (382)
T ss_pred CEEEECCcCHHhccCCCCCHHHHHHHH-HHHH--h-cCCccccccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHH
Confidence 578998644 3358887766555432 2211 1 11111112345678888888888777788899999999864433
Q ss_pred cc----C------C------CCeEEEcCCCCccHHHHHhhhccc---------CCcEEEEecCCCHHHHHhhcC-CCceE
Q 022194 89 LL----G------T------GEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIG-PWTKL 142 (301)
Q Consensus 89 ~~----~------~------g~~Vlv~~~~y~~~~~~~~~~~~~---------~g~~~~~~~~~d~~~l~~~l~-~~~~~ 142 (301)
+. . + +.+|+.....||+........... .--.+..++..|++.+++.+. .++++
T Consensus 91 lAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aa 170 (382)
T PLN00144 91 FARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAA 170 (382)
T ss_pred HHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEE
Confidence 32 1 1 357999899999976432221111 001245566668999998886 57889
Q ss_pred EEEeCCCCCccccc--c--HHHHHHHHHHcCCEEEEeCCcCCccc-cCc---cCCCCcEEEecccccccCCCCceeeEEE
Q 022194 143 VWVESPTNPRQQIC--D--IRKIAEMAHAHGALLLVDNSIMSPVL-SRP---LELGADIVMHSATKFIAGHSDVMAGVLA 214 (301)
Q Consensus 143 v~i~~~~np~G~~~--~--l~~l~~l~~~~~~~li~D~~~~~~~~-~~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~ 214 (301)
|+++..+||.|... . +++|.++|++||+++|+||+++.... ..+ ...+.+..+.+++|.++ + |++.|+++
T Consensus 171 vi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~-~-G~pig~v~ 248 (382)
T PLN00144 171 VFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLA-G-GLPIGAVL 248 (382)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEeccccc-C-CcceEEEE
Confidence 99998889855553 2 89999999999999999999864322 111 12344455888999995 3 57899999
Q ss_pred EcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHH----HHHhCCCcceEec
Q 022194 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAE----FLASHPRVKKVNY 279 (301)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~----~l~~~~~v~~v~~ 279 (301)
+++ .+.+.+.......+...++..++++...++.+. +..++..+..+++.+ .++++|.+..+..
T Consensus 249 ~~~-~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg 318 (382)
T PLN00144 249 VTE-KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRG 318 (382)
T ss_pred EcH-HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeec
Confidence 874 455544333344455667777777765555442 233334444444444 3444554444443
No 259
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=2.1e-16 Score=134.07 Aligned_cols=211 Identities=25% Similarity=0.244 Sum_probs=149.4
Q ss_pred CCchHHHHH----HHHHhhcCCCc-eEEecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEe
Q 022194 53 GNPTRDALE----SLLAKLDKADR-ALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRV 124 (301)
Q Consensus 53 g~~~~~~l~----~~l~~~~~~~~-~i~~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~ 124 (301)
|....++++ ++.+++||++. .+=..||+.|. .++.++++|||+|+-.+..++++.... .-....| .++...
T Consensus 66 Gce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg-~~v~~sG~~~~~v~Y 144 (413)
T COG0112 66 GCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHG-SPVNFSGKLFNVVSY 144 (413)
T ss_pred CCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCC-CCCCccceeEEeEec
Confidence 333455544 55678899984 34467888776 688999999999998888887775322 0111222 233333
Q ss_pred cCC------CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC-----CccccCccCCCCc
Q 022194 125 NTC------DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLSRPLELGAD 192 (301)
Q Consensus 125 ~~~------d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~-----~~~~~~~~~~~~d 192 (301)
+.+ |.|++++... .++++|+.-...+| ...|++++.++|++.|++|.+|.+|- .|.+++|... +|
T Consensus 145 ~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~--r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-Ad 221 (413)
T COG0112 145 GVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYS--RPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-AD 221 (413)
T ss_pred ccccccCccCHHHHHHHHHHhCCCEEEECccccc--cccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cc
Confidence 332 7888887776 58999887666655 46799999999999999999999985 4667788887 99
Q ss_pred EEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHh------HHHHHcccc-cHHHHHHHHHHHHHHHH
Q 022194 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD------CWICLRGVK-TMALRVEKQQDNAQKIA 265 (301)
Q Consensus 193 i~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~-~~~~~~~~~~~~~~~l~ 265 (301)
++++|.||+|.|| |+|++.++++++.+++...... +..-++.. +.++.+.++ .+.++.++..+|++.|.
T Consensus 222 vVTtTTHKTlrGP---rGG~Il~~~eel~kkin~aVFP-g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLA 297 (413)
T COG0112 222 VVTTTTHKTLRGP---RGGIILTNDEELAKKINSAVFP-GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALA 297 (413)
T ss_pred eEeCCcccCCCCC---CceEEEeccHHHHHHhhhhcCC-ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 9999999999988 6799999987777755443221 11111111 122233333 45788899999999999
Q ss_pred HHHHhC
Q 022194 266 EFLASH 271 (301)
Q Consensus 266 ~~l~~~ 271 (301)
+.|.++
T Consensus 298 e~l~~~ 303 (413)
T COG0112 298 EALKER 303 (413)
T ss_pred HHHHHc
Confidence 999984
No 260
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.73 E-value=2.3e-16 Score=136.92 Aligned_cols=248 Identities=18% Similarity=0.204 Sum_probs=166.5
Q ss_pred eeeecCCCCCC--CCccccCeeecceeecCCCCCCCCccccCCCCch--HHHHHHHHHhhcCC-CceEEecchHHHHHHH
Q 022194 12 LLMNFSNEFDP--YGALSTPLYQTATFKQPSATENGPYDYTRSGNPT--RDALESLLAKLDKA-DRALCFTSGMAALAAV 86 (301)
Q Consensus 12 ~~~~~~~~~~~--~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~--~~~l~~~l~~~~~~-~~~i~~~sG~~ai~~~ 86 (301)
.++||..+... +|..++++..+.. .+.+ .+ ..+|.|+ .-++.+.+.+++.. +.+.+++|||+|....
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~-~~l~----~G---~~fg~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsA 125 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQ-EQLE----RG---LSFGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSA 125 (432)
T ss_pred EeeehhccCcccccCCCCHHHHHHHH-HHHH----hc---CCCCCCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHH
Confidence 67777644444 6666655444332 2211 11 2234554 44566778888766 7889999999998655
Q ss_pred Hhc---cCCCCeEEEcCCCCccHHHHHhhh----------------cccCCcEEEEecCCCHHHHHhhcC---CCceEEE
Q 022194 87 THL---LGTGEEIVAGDDLYGGTDRLLSRV----------------TPKTGVVVKRVNTCDLDEVASAIG---PWTKLVW 144 (301)
Q Consensus 87 ~~~---~~~g~~Vlv~~~~y~~~~~~~~~~----------------~~~~g~~~~~~~~~d~~~l~~~l~---~~~~~v~ 144 (301)
+++ ....|+|+.++.+||++...+--- -...--.+..++.+|++.++++++ +++.+|+
T Consensus 126 iRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVI 205 (432)
T COG0001 126 IRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVI 205 (432)
T ss_pred HHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEE
Confidence 554 445789999999999987654211 111112455666679999998887 4789999
Q ss_pred EeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcccc---CccCCCCcEEEecccccccCCCCceeeEEEEcc
Q 022194 145 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (301)
Q Consensus 145 i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~ 217 (301)
++......|.+.| +++|.++|+++|++||.||+....-.. .-..+|....+.++.|.++| |+..|++.++.
T Consensus 206 vEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlGKiIGG--GlP~ga~gGr~ 283 (432)
T COG0001 206 VEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLGKIIGG--GLPIGAFGGRA 283 (432)
T ss_pred eccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhhhhhcC--CcceeeeccHH
Confidence 9987777899876 889999999999999999997643221 22345677777789999965 67788888774
Q ss_pred hhHHHHHHHhhhh---cCCCCCHHhHHHHHcccccHHH---HHHHHHHHHHHHHHHHHh
Q 022194 218 ERLAKELYFLQNA---EGSGLAPFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 218 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~l~~ 270 (301)
++++.+...... .+..-+|.+..+...+++.+.+ ..+++.+..++|++.|++
T Consensus 284 -eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 284 -EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred -HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 555644333322 2233456666666666666543 578888888888888875
No 261
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.72 E-value=1.6e-16 Score=143.63 Aligned_cols=248 Identities=14% Similarity=0.123 Sum_probs=150.8
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-CCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-ADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~-~~~~i~~~sG~~ai~~~~ 87 (301)
.+++||.++- .-+|..++.+..+.. .+.+ ... .|. ...+...++.+.|++.+. .+++++++||++|+.+++
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~~~--~~~-~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Al 121 (423)
T TIGR00713 48 NEYIDYVLSWGPLILGHAHPRVVEAVK-EALE--RGT--SYG-APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAV 121 (423)
T ss_pred CEEEEccccccccccCCCCHHHHHHHH-HHHH--hCC--cCC-CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHH
Confidence 3678886432 236776665555432 2211 111 121 133457888999988774 357888899999986443
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHhhh----------------cccCCcEEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLSRV----------------TPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~~~----------------~~~~g~~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
.+ ...+++|+..++.||+........ ..........++..|++++++.+. +++++|++
T Consensus 122 k~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ 201 (423)
T TIGR00713 122 RLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIV 201 (423)
T ss_pred HHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEE
Confidence 32 335689999999999975322110 000111234455568999998886 57889998
Q ss_pred e-CCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcccc---CccCCCCcEEEecccccccCCCCceeeEEEEcc
Q 022194 146 E-SPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (301)
Q Consensus 146 ~-~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~ 217 (301)
+ .++| +|.+.+ +++|.++|++||+++|+||+|.....+ .....+.+..+.+|+|.++ +|++.|++++++
T Consensus 202 ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~t~sK~l~--~G~pig~v~~~~ 278 (423)
T TIGR00713 202 EPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLTTLGKIIG--GGLPVGAFGGRR 278 (423)
T ss_pred eCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchhhhhhhhc--CCCceeeeeEHH
Confidence 7 5555 788865 789999999999999999998643221 1111233333557999995 468899999875
Q ss_pred hhHHHHHHHh---hhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHH
Q 022194 218 ERLAKELYFL---QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL 268 (301)
Q Consensus 218 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l 268 (301)
.+.+.+... ....+...++..+++++..++.+.+ ..++..+..+++++.|
T Consensus 279 -~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l 333 (423)
T TIGR00713 279 -EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGL 333 (423)
T ss_pred -HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 455544321 1223345677777776666654432 3344444444444433
No 262
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.72 E-value=3.1e-16 Score=139.56 Aligned_cols=251 Identities=18% Similarity=0.128 Sum_probs=147.1
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchHHHHHHHHhc
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGMAALAAVTHL 89 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~~ai~~~~~~ 89 (301)
.+++||.+...+++..++|.+..+...+.+ +... ..+..-.+.+.++.+.+... .+ ..++++||++|+.+++.+
T Consensus 29 ~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~--~~~~-~~~~~~~~~~~~la~~l~~~--~~~~~~~~~SGseA~~~Al~~ 103 (375)
T PRK04260 29 KKYLDFSSGIGVTNLGFHPQVQQALQKQAG--LIWH-SPNLYLNSLQEEVAQKLIGD--KDYLAFFCNSGAEANEAAIKI 103 (375)
T ss_pred CEEEECCCCcccccCCCCHHHHHHHHHHHH--hcCc-ccCccCCHHHHHHHHHHhcC--cCCEEEEcCccHHHHHHHHHH
Confidence 478999855466555556766654322211 1111 11111122244444433321 12 256778999988644433
Q ss_pred ---cCCCCeEEEcCCCCccHHHHHhhhc------ccCCc---EEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 90 ---LGTGEEIVAGDDLYGGTDRLLSRVT------PKTGV---VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 90 ---~~~g~~Vlv~~~~y~~~~~~~~~~~------~~~g~---~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
..++++|++.+..||+......... +..+. .+...+..|++.+++.+.+++.+|+++.+++++|.+.+
T Consensus 104 ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~ 183 (375)
T PRK04260 104 ARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPA 183 (375)
T ss_pred HHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCeECCCCCcCC
Confidence 3456789999999997532211111 11111 12223345899999988888899999999999998864
Q ss_pred ----HHHHHHHHHHcCCEEEEeCCcCCccc-cCcc---CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh
Q 022194 158 ----IRKIAEMAHAHGALLLVDNSIMSPVL-SRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (301)
Q Consensus 158 ----l~~l~~l~~~~~~~li~D~~~~~~~~-~~~~---~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~ 229 (301)
+++|.++|+++|+++|+||+|..... .... ..+.+..+.||||.++ + |++.|+++++++ +.+.+.....
T Consensus 184 ~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~-~-G~~ig~~~~~~~-~~~~~~~~~~ 260 (375)
T PRK04260 184 DKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLA-N-GVPVGAMLAKSS-LGGAFGYGSH 260 (375)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEeccccc-C-CcceEEEEEcHH-HHhhcCCCCC
Confidence 89999999999999999999863211 1111 2233333558999995 3 578999999854 4443332223
Q ss_pred hcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHH
Q 022194 230 AEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~ 269 (301)
......++..+.++...++.+ .+..++..++.+++++.++
T Consensus 261 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~ 302 (375)
T PRK04260 261 GSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQ 302 (375)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 333445666666666666543 2334555555555555544
No 263
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.72 E-value=2.3e-16 Score=151.93 Aligned_cols=211 Identities=18% Similarity=0.159 Sum_probs=152.8
Q ss_pred HHHHHHHHHhhcCCCceEEecchH----HHHH-HHHhccCC-CC----eEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 57 RDALESLLAKLDKADRALCFTSGM----AALA-AVTHLLGT-GE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~----~ai~-~~~~~~~~-g~----~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
.+++++++++++|++.+.+..+++ +++. ++..+.++ || +|+++...|+++...|. ..|++++.++.
T Consensus 570 ~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----~~G~~vv~v~~ 645 (993)
T PLN02414 570 FEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----MCGMKIVVVGT 645 (993)
T ss_pred HHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH----HCCCEEEEecc
Confidence 678999999999998777766655 5654 66667766 77 89999999999985553 37899999986
Q ss_pred C-----CHHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc--ccCccCCCCcEEEe
Q 022194 127 C-----DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMH 196 (301)
Q Consensus 127 ~-----d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~--~~~~~~~~~di~~~ 196 (301)
+ |+++++++++ +++++|++++|+|-+|...|+++|+++||++|+++++|.++..+. ...+.+.|+|++++
T Consensus 646 d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~ 725 (993)
T PLN02414 646 DAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHL 725 (993)
T ss_pred CCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEe
Confidence 4 8999999998 478999999999999999999999999999999999999997654 34567889999999
Q ss_pred cccccccCCCC---ceeeEEEEcchhHHHHHHHh------------hhhcCCCCC--HH---h----HHHH--HcccccH
Q 022194 197 SATKFIAGHSD---VMAGVLAVKGERLAKELYFL------------QNAEGSGLA--PF---D----CWIC--LRGVKTM 250 (301)
Q Consensus 197 S~sK~~~g~~g---~~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~--~~---~----~~~~--~~~l~~~ 250 (301)
|.||+|++|.| .-.|++.+++ .+...+-.. .....++.+ +. . ++.. .-+.+-+
T Consensus 726 s~HK~f~~P~G~GGPg~G~l~~~~-~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl 804 (993)
T PLN02414 726 NLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGL 804 (993)
T ss_pred cCCccCCcCcccCCCCeeeEEEch-hhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHH
Confidence 99998875532 2258887775 333322110 000011111 11 0 1111 2223335
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC
Q 022194 251 ALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
.+..+....++.++.+.|++..
T Consensus 805 ~~~a~~a~~nAnYl~~rL~~~~ 826 (993)
T PLN02414 805 TDASKIAILNANYMAKRLEGHY 826 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 5556778889999999997743
No 264
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.72 E-value=1e-15 Score=130.83 Aligned_cols=193 Identities=16% Similarity=0.191 Sum_probs=138.6
Q ss_pred ceEEecch-HHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhcC--------
Q 022194 72 RALCFTSG-MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG-------- 137 (301)
Q Consensus 72 ~~i~~~sG-~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~-------- 137 (301)
..+++++| +.++ .++..++++||.|++...+|.+.. ...+..|+.++.|+.+ ++|.+++.+.
T Consensus 125 wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL----~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k 200 (472)
T KOG0634|consen 125 WDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSAL----QSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYK 200 (472)
T ss_pred ceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHH----HhccccCceEEeccccCCCCCHHHHHHHHhcCCccccc
Confidence 35666666 6888 488889999999999999998886 6778899999999987 6777777764
Q ss_pred -CCceEEEE-eCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc---------------------------C
Q 022194 138 -PWTKLVWV-ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---------------------------R 185 (301)
Q Consensus 138 -~~~~~v~i-~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~---------------------------~ 185 (301)
+++++++. ...+||||.... -++|.++||+|++++|+||.|...-+. .
T Consensus 201 ~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sfls 280 (472)
T KOG0634|consen 201 KPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLS 280 (472)
T ss_pred CCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCccc
Confidence 23666665 467899999986 456999999999999999998521111 1
Q ss_pred ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh--hhcCCCCCHHhHHHHHc------ccccHHHHHHHH
Q 022194 186 PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAPFDCWICLR------GVKTMALRVEKQ 257 (301)
Q Consensus 186 ~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~l~~~~~~~~~~ 257 (301)
.+..|.++-..||||-+ + +|+|.||+.+++..+.+.+.... .....+.++...+++++ .++++.+.+..+
T Consensus 281 lDtdGrVIr~dSFSKii-a-PGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Y 358 (472)
T KOG0634|consen 281 LDTDGRVIRNDSFSKII-A-PGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSY 358 (472)
T ss_pred ccccccEEeccchhhhh-c-CcceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12347789999999999 5 57899999988644433332222 12234445544444432 245667777777
Q ss_pred HHHHHHHHHHHHh
Q 022194 258 QDNAQKIAEFLAS 270 (301)
Q Consensus 258 ~~~~~~l~~~l~~ 270 (301)
..++..+...+.+
T Consensus 359 t~Rrn~~l~Al~k 371 (472)
T KOG0634|consen 359 TERRNALLSALDK 371 (472)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777777765
No 265
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.72 E-value=6.2e-16 Score=138.35 Aligned_cols=263 Identities=14% Similarity=0.113 Sum_probs=161.8
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-CCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-ADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~-~~~~i~~~sG~~ai~~~~ 87 (301)
..++||.++ +.-+|..++.+..+.. .+.+ ...+....+.++...++.+.|.+... .+.+.+++||++|+...+
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~---~~~~~~~~~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~Al 115 (408)
T PRK04612 40 REYLDLAAGIAVCGLGHNDPDLVAALT-EQAG---KLWHTSNVFYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAI 115 (408)
T ss_pred CEEEEcCccHhhccCCCCCHHHHHHHH-HHHH---hccccccccCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHH
Confidence 478888644 3458887666665442 2211 11111112234557788888888763 357888899999986443
Q ss_pred hccC---------C-CCeEEEcCCCCccHHHHHhhhcc------cC---CcEEEEecCCCHHHHHhhcCC-CceEEEEeC
Q 022194 88 HLLG---------T-GEEIVAGDDLYGGTDRLLSRVTP------KT---GVVVKRVNTCDLDEVASAIGP-WTKLVWVES 147 (301)
Q Consensus 88 ~~~~---------~-g~~Vlv~~~~y~~~~~~~~~~~~------~~---g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~ 147 (301)
.+.+ + .++|+.....||+.......... .+ --.+..++..|.+.+++.+.+ ++.+|+++
T Consensus 116 klAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~e- 194 (408)
T PRK04612 116 KLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLE- 194 (408)
T ss_pred HHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEEC-
Confidence 3321 1 34689989999997533211110 00 012345566689999988864 45555555
Q ss_pred CCCCcccccc-----HHHHHHHHHHcCCEEEEeCCcCCccc-c---CccCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 148 PTNPRQQICD-----IRKIAEMAHAHGALLLVDNSIMSPVL-S---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 148 ~~np~G~~~~-----l~~l~~l~~~~~~~li~D~~~~~~~~-~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
|.+++|.+.+ +++|.++|++||+++|+||++..... . .....+.++.+.+++|.++ +|++.|+++.+++
T Consensus 195 P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~--~G~piga~~~~~~ 272 (408)
T PRK04612 195 PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALG--GGFPIGAMLAGPK 272 (408)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhc--CCCceEEEEECHH
Confidence 5555655532 89999999999999999999863211 1 1123356788889999995 3578899887754
Q ss_pred hHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----CCCcceEecCC
Q 022194 219 RLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAG 281 (301)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~~~v~~v~~p~ 281 (301)
+.+.+.........+.++..+.++...++.+. +..++..++.+++.+.|++ ++.+..++..|
T Consensus 273 -~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~G 340 (408)
T PRK04612 273 -VAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRG 340 (408)
T ss_pred -HHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccc
Confidence 44544333333445567788888777776653 3456666666677777665 34444455554
No 266
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=2.5e-15 Score=136.40 Aligned_cols=215 Identities=20% Similarity=0.162 Sum_probs=137.0
Q ss_pred CCchHHHHHH----HHHhhcCCCc-eEEe----cchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHH--hhhc--ccCC
Q 022194 53 GNPTRDALES----LLAKLDKADR-ALCF----TSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLL--SRVT--PKTG 118 (301)
Q Consensus 53 g~~~~~~l~~----~l~~~~~~~~-~i~~----~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~--~~~~--~~~g 118 (301)
|....+++++ +..+.|+.++ .+++ .||+.|. .++.++++|||+|+..+...+++.... .... ...+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~ 153 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATS 153 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccce
Confidence 4445666664 4556677663 4444 8898776 588889999999998664333332211 0111 1122
Q ss_pred cEEE--EecCC------CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC----
Q 022194 119 VVVK--RVNTC------DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 119 ~~~~--~~~~~------d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~---- 185 (301)
..+. .+..+ |.+++++.+. .++++|++. .++ +|...|+++|.++|+++|+++++|++|+.|....
T Consensus 154 ~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~ 231 (475)
T PLN03226 154 IYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA 231 (475)
T ss_pred EEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC
Confidence 2211 22222 8999999886 467766653 233 6778899999999999999999999998876642
Q ss_pred -ccCCCCcEEEecccccccCCCCceeeEEEEcchhH----------HHHHHHhhh----hcCCCCCHHhHHHHHccccc-
Q 022194 186 -PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL----------AKELYFLQN----AEGSGLAPFDCWICLRGVKT- 249 (301)
Q Consensus 186 -~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~----------~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~- 249 (301)
+.. ++|++++|+||++.||. +|+++++++.. .+....... ....++++...+++..+++.
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred CCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 222 68999999999998875 58888765421 011111111 12233444444444444443
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 250 ----MALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 250 ----~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
+.++.++..++++++++.|++ .++
T Consensus 308 ~~~~~~~~~~~~~~na~~L~~~L~~-~G~ 335 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALANRLMS-KGY 335 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHh-CCC
Confidence 345678899999999999987 344
No 267
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.71 E-value=5.4e-16 Score=136.31 Aligned_cols=258 Identities=14% Similarity=0.088 Sum_probs=165.6
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||.++ +.-+|..+++++.+.. .+.+ +.. +....+.++...++++.++++.+.+.+++++||++|+.+.+.
T Consensus 24 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~ql~--~~~-~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alk 99 (364)
T PRK04013 24 RRYLDLIAGIGVNVLGHNHPEWVEEMS-EQLE--KLV-VAGPMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALK 99 (364)
T ss_pred CEEEEcccChhhccCCCCCHHHHHHHH-HHHH--hcC-CccCCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHH
Confidence 478888633 3458887777665432 2211 111 111123456688999999999888889999999999864444
Q ss_pred cc---CCCCeEEEcCCCCccHHHHHhhh---------cccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 89 LL---GTGEEIVAGDDLYGGTDRLLSRV---------TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 89 ~~---~~g~~Vlv~~~~y~~~~~~~~~~---------~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
+. +.+++|+..+.+||+.....-.. ....-..+..++..|.+.+++.+.+++++|+++......|...
T Consensus 100 lar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~aAvivEpi~g~gG~~~ 179 (364)
T PRK04013 100 FARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKETAAVIFEPIQGEGGIVP 179 (364)
T ss_pred HHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhcCCcEEEEEcCCcCCCCCcC
Confidence 32 33488999999999975332111 0111123455666689999999988999999998887667664
Q ss_pred -c---HHHHHHHHHHcCCEEEEeCCcCC---ccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh
Q 022194 157 -D---IRKIAEMAHAHGALLLVDNSIMS---PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (301)
Q Consensus 157 -~---l~~l~~l~~~~~~~li~D~~~~~---~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~ 229 (301)
| +++|.++|++||+++|+||++.. |.+......+....+.+++|.+++ |+..+.++.+.+ + . ...+
T Consensus 180 ~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~gK~lgg--G~P~~a~~~~~~-~-~---~~~~ 252 (364)
T PRK04013 180 AKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIGN--GVPVSLTLTNFD-V-E---RGKH 252 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEecccccC--CceeEEEEeccc-c-c---CCCc
Confidence 4 99999999999999999999863 222222233444445558999965 366777777644 2 1 1234
Q ss_pred hcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCC
Q 022194 230 AEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 282 (301)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~ 282 (301)
.++...++..++++.+.++.+.+ +.+.++++...+.++. +.|..++..|+
T Consensus 253 ~~T~~gnp~~~aaa~a~l~~i~~--~~l~~~~~~~l~~l~~-~~v~~vRG~Gl 302 (364)
T PRK04013 253 GSTFGGNPLACKAVAVTLRILRR--ERLVEKAGEKFIEIKG-ERVVTTRGRGL 302 (364)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHhcc-CcceeeeeCcE
Confidence 44566788888888888777643 2344444333233322 45555665554
No 268
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=4.3e-16 Score=140.99 Aligned_cols=254 Identities=17% Similarity=0.105 Sum_probs=154.2
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-C-CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-K-ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~-~~~~i~~~sG~~ai~~~ 86 (301)
.+++||.++ +..+|..++.+..+. ..+.+ ...........++...++.+.|++++ + .+.+++.+||++|+.+.
T Consensus 43 ~~ylD~~~g~~~~~lGh~~p~v~~a~-~~q~~--~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~A 119 (433)
T PRK08117 43 KEYLDFTSGIAVANVGHRHPKVVQAI-KEQAD--KLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGA 119 (433)
T ss_pred CEEEECCcchhhccCCCCCHHHHHHH-HHHHH--hccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHH
Confidence 478898755 557886555544433 22211 11111111224566889999999988 3 34556668999998644
Q ss_pred Hhc---cCCCCeEEEcCCCCccHHHHHhhhcc-------cCC---cEEEEecC-----------------CCHHHHHhhc
Q 022194 87 THL---LGTGEEIVAGDDLYGGTDRLLSRVTP-------KTG---VVVKRVNT-----------------CDLDEVASAI 136 (301)
Q Consensus 87 ~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~-------~~g---~~~~~~~~-----------------~d~~~l~~~l 136 (301)
+++ .....+|+..+..||+.......+.. ... -.+..++. .+++++++.+
T Consensus 120 lklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 199 (433)
T PRK08117 120 LKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLF 199 (433)
T ss_pred HHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHH
Confidence 443 33456788888999986532111110 000 01111111 1345566554
Q ss_pred C-----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccc-cC---ccCCCCcEEEeccccccc
Q 022194 137 G-----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL-SR---PLELGADIVMHSATKFIA 203 (301)
Q Consensus 137 ~-----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~~---~~~~~~di~~~S~sK~~~ 203 (301)
+ +++.+|+++......|.+.+ +++|.++|++||+++|+||+|+.... +. ....+.+..+.+++|.++
T Consensus 200 ~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg 279 (433)
T PRK08117 200 KHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIA 279 (433)
T ss_pred HhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhcc
Confidence 3 46889999988888888877 99999999999999999999973211 11 122355555678999995
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
+|++.|+++++++ +.+.+.......+...++..+++++..++.+. ...++..++.+++++.|++
T Consensus 280 --~G~pigav~~~~~-i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~ 345 (433)
T PRK08117 280 --SGLPLSAVVASKE-LMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEV 345 (433)
T ss_pred --CCCcceeEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 3577888888754 44443322333334557777777777776552 3445555666666666654
No 269
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.70 E-value=1.3e-15 Score=128.39 Aligned_cols=220 Identities=23% Similarity=0.238 Sum_probs=153.8
Q ss_pred CCCC-chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecC
Q 022194 51 RSGN-PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT 126 (301)
Q Consensus 51 ~~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~ 126 (301)
.||+ +...+++++++++++...+++++|||.|.. ++.+.++|++.|++..-.|-...+. ...+.+ +.++..++-
T Consensus 30 ~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~~E~--Ga~~~~~~~~~~~~~~g 107 (342)
T COG2008 30 VYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHETAHIYTDEC--GAPEFFGGGQKLPIVPG 107 (342)
T ss_pred CCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEeccccceeccc--CcHHHHcCCceeccCCC
Confidence 4455 559999999999999999999999998875 7888899999999988776544321 112222 234444441
Q ss_pred C----CHHHHHhhcCC------CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCc---ccc---Ccc
Q 022194 127 C----DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP---VLS---RPL 187 (301)
Q Consensus 127 ~----d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~---~~~---~~~ 187 (301)
. +++++++.+.. .+..+++.+.+|..|++++ +++|.++||++|+.|++|.+.-.- .++ ...
T Consensus 108 ~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~ 187 (342)
T COG2008 108 ADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTI 187 (342)
T ss_pred CCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHH
Confidence 2 89999997762 3456666666667899986 666888999999999999995321 111 112
Q ss_pred CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHH--hHHHHHcccccHHHHHHHHHHH--HHH
Q 022194 188 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF--DCWICLRGVKTMALRVEKQQDN--AQK 263 (301)
Q Consensus 188 ~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~--~~~ 263 (301)
..++|++..++||..+.| +|.++..+..+.++...++...|..+... .++..+..++.--++.....+| +++
T Consensus 188 ~~~~D~v~~~~tK~g~~~----~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~ 263 (342)
T COG2008 188 KSYVDSVSFCLTKGGGAP----VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAAR 263 (342)
T ss_pred HhhCCEEEEecccCCcce----eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 347899999999998554 56666667788888888888877665442 3334445555433444455555 899
Q ss_pred HHHHHHhCCCcce
Q 022194 264 IAEFLASHPRVKK 276 (301)
Q Consensus 264 l~~~l~~~~~v~~ 276 (301)
|.+.+...++++.
T Consensus 264 La~~~~~~~G~~~ 276 (342)
T COG2008 264 LAEGLEAKPGVKL 276 (342)
T ss_pred HHHhhhhcCCcee
Confidence 9999998777643
No 270
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.70 E-value=1.5e-15 Score=124.62 Aligned_cols=209 Identities=16% Similarity=0.155 Sum_probs=154.6
Q ss_pred HHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 57 RDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
.+++.+-++..|... ..++-++|+.+.. ++..++.|||+|++....-. ..-+....+++|++|..++.+
T Consensus 52 m~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~w--g~ra~D~~~r~ga~V~~v~~~~G~~~ 129 (385)
T KOG2862|consen 52 MDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTW--GQRAADCARRYGAEVDVVEADIGQAV 129 (385)
T ss_pred HHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechH--HHHHHHHHHhhCceeeEEecCcccCc
Confidence 677778888888654 3556677888874 77788999999997654322 223458899999999999866
Q ss_pred CHHHHHhhcC-CCceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCCcCCcc-ccCccCCCCcEEEecccccccC
Q 022194 128 DLDEVASAIG-PWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~-l~~l~~l~~~~~~~li~D~~~~~~~-~~~~~~~~~di~~~S~sK~~~g 204 (301)
+++++.+++. .++++|++++..+.||..+| ++.+-++||+|++++++|.+-+.+. ....+++|.|+......|.+++
T Consensus 130 ~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~a 209 (385)
T KOG2862|consen 130 PLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGA 209 (385)
T ss_pred cHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCC
Confidence 7899998887 57899999999999999999 6778899999999999999988665 4578889999999999999999
Q ss_pred CCCceeeEEEEcchhHHHHHHHhh--------------hhcC---------CCCCHHhHHHHHccccc-----HHHHHHH
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQ--------------NAEG---------SGLAPFDCWICLRGVKT-----MALRVEK 256 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~--------------~~~~---------~~~~~~~~~~~~~~l~~-----~~~~~~~ 256 (301)
|+|+ +.+..+++.+ ++++... +.++ .+.+....+.+..+++. +++..++
T Consensus 210 P~GL--siisfS~ka~-~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~r 286 (385)
T KOG2862|consen 210 PAGL--SIISFSDKAL-EAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRR 286 (385)
T ss_pred CCCc--ceeecCHHHH-HHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9996 6676665544 3222111 1122 12232333333334433 4667788
Q ss_pred HHHHHHHHHHHHHh
Q 022194 257 QQDNAQKIAEFLAS 270 (301)
Q Consensus 257 ~~~~~~~l~~~l~~ 270 (301)
+.++++.+...|++
T Consensus 287 H~e~s~~l~~~l~~ 300 (385)
T KOG2862|consen 287 HREMSKWLKLSLEA 300 (385)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888888876
No 271
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.70 E-value=9.1e-16 Score=137.89 Aligned_cols=220 Identities=21% Similarity=0.190 Sum_probs=157.4
Q ss_pred HHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHhc---cC--C---C------CeEEEcCCCCccHHHHHhhhcccCC
Q 022194 57 RDALESLLAKLDKAD---RALCFTSGMAALA-AVTHL---LG--T---G------EEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~~---~~--~---g------~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
.+++-.+++++++.+ ...++++||+|+. ++++. .. . + -+|+++.-.|.++. +.+...|
T Consensus 103 E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~----Kaa~~lG 178 (460)
T COG0076 103 EERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFE----KAARYLG 178 (460)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHH----HHHHHhC
Confidence 556677888888874 4678888898864 44332 11 0 1 15888888888886 7777778
Q ss_pred cEEEEecCC------CHHHHHhhcCCCceE--EEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-----
Q 022194 119 VVVKRVNTC------DLDEVASAIGPWTKL--VWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR----- 185 (301)
Q Consensus 119 ~~~~~~~~~------d~~~l~~~l~~~~~~--v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~----- 185 (301)
+....++.+ |++++++++.+++.. |+.+.+++++|.+.|+++|+++|+++++|++||.+++....+-
T Consensus 179 ~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~ 258 (460)
T COG0076 179 LGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG 258 (460)
T ss_pred CCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccc
Confidence 777777654 799999999977766 8888999999999999999999999999999999998765431
Q ss_pred ---ccCCCCcEEEecccccccCCCCceeeEEEEcchh-HHHHHHHhhhhcC---------C-C---CCHHhHHHHHccc-
Q 022194 186 ---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFLQNAEG---------S-G---LAPFDCWICLRGV- 247 (301)
Q Consensus 186 ---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~-~~~~~~~~~~~~~---------~-~---~~~~~~~~~~~~l- 247 (301)
..-.++|.++.|+||++..|.| +|+++.++++ +.+.+.......+ . + -....+|+.+..+
T Consensus 259 ~~~f~l~~vdSIt~d~HK~g~aP~~--~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG 336 (460)
T COG0076 259 RWDFGLEGVDSITVDGHKYGLAPIG--CGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLG 336 (460)
T ss_pred hhhcCCCCceEEEECcccccCCCCC--ceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhC
Confidence 1122679999999999988877 5888888874 4333221111111 0 0 1223344544443
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCC
Q 022194 248 -KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 282 (301)
Q Consensus 248 -~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~ 282 (301)
+.+.+..++..++++++.+.|++.+....+..|.+
T Consensus 337 ~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l 372 (460)
T COG0076 337 REGYRKLLDRTLELARYLAEELEKLGDFELVNEPEL 372 (460)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCcc
Confidence 55778888899999999999999876655555544
No 272
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.69 E-value=6.8e-16 Score=143.68 Aligned_cols=212 Identities=17% Similarity=0.138 Sum_probs=147.9
Q ss_pred HHHHHHHHHhhcCCCceEEecchH-HHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------
Q 022194 57 RDALESLLAKLDKADRALCFTSGM-AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~-~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------- 127 (301)
..+.++.+++.||+++..++++|| .++ .++++++++||.||+.+++|.+... ..+...|+..+++.+.
T Consensus 176 i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~h---gaLiLsGa~PVYl~P~~n~~Gi~ 252 (720)
T PRK13578 176 AKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHH---GALIQAGATPVYLETARNPFGFI 252 (720)
T ss_pred HHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH---HHHHHcCCeEEEeeccccccCCc
Confidence 788999999999999999999996 556 5888899999999999999988762 2345677888887643
Q ss_pred ---C-----HHHHHhhcCCC----------ceEEEEeCCCCCccccccHHHHHHH-HHHcCCEEEEeCCcCCcccc----
Q 022194 128 ---D-----LDEVASAIGPW----------TKLVWVESPTNPRQQICDIRKIAEM-AHAHGALLLVDNSIMSPVLS---- 184 (301)
Q Consensus 128 ---d-----~~~l~~~l~~~----------~~~v~i~~~~np~G~~~~l~~l~~l-~~~~~~~li~D~~~~~~~~~---- 184 (301)
+ .+.+++++.+. .+++++++|++ .|.+.++++|+++ ++.++ +|++||+|+.....
T Consensus 253 g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~ 330 (720)
T PRK13578 253 GGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMM 330 (720)
T ss_pred CCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCccc
Confidence 3 45577777643 58999999998 8999999999998 67888 99999999753321
Q ss_pred -----CccCCCCc----EEEecccccccCCCCceeeEEEEcchhH--------HHHHHHhhhhcCCCCCHHhHHHHHcc-
Q 022194 185 -----RPLELGAD----IVMHSATKFIAGHSDVMAGVLAVKGERL--------AKELYFLQNAEGSGLAPFDCWICLRG- 246 (301)
Q Consensus 185 -----~~~~~~~d----i~~~S~sK~~~g~~g~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~- 246 (301)
...+.|+| +++.|.||.+++.. +++++..++..+ .+++........++.+.....+.+..
T Consensus 331 ~~~p~~al~~GaD~p~i~v~QStHKtL~alT--QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva 408 (720)
T PRK13578 331 ADCSPLLLELNENDPGIFVTQSVHKQQAGFS--QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVN 408 (720)
T ss_pred ccCChhhhhcCCCCCCeEEEEChhhcchhhh--hHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 12456888 99999999997764 578887765322 13333333333333332222111111
Q ss_pred ---cc--cHHHHHHHHHHHHHHHHHHH-HhCCCcc
Q 022194 247 ---VK--TMALRVEKQQDNAQKIAEFL-ASHPRVK 275 (301)
Q Consensus 247 ---l~--~~~~~~~~~~~~~~~l~~~l-~~~~~v~ 275 (301)
++ .-.+..++..+.+..+++.| +..+.+.
T Consensus 409 ~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~ 443 (720)
T PRK13578 409 AKMHEGESGRRLWMECVKLGIEARKLILARCKLIR 443 (720)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 11 11334566777777888877 5555543
No 273
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.69 E-value=8.5e-15 Score=129.66 Aligned_cols=211 Identities=19% Similarity=0.174 Sum_probs=147.6
Q ss_pred CCchHHHHHHHHHhhcCCCceEEecchHHHHHHH-HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEec------
Q 022194 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN------ 125 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~-~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~------ 125 (301)
|+|+..++++.+++++|.+.++.+++|+.|+.++ ...++|||.| +...|..... ......|..+..+.
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~---ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTR---YHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhH---HHHHhCCcEEEeeecccccc
Confidence 6678999999999999999999999999888644 3457899965 4444444332 32355565555442
Q ss_pred -----C----CCHHHHHhhcCC----CceEEEEeCCCCCcc-ccc---cHHHHHHHHHHcCCEEEEeCCcCCcc------
Q 022194 126 -----T----CDLDEVASAIGP----WTKLVWVESPTNPRQ-QIC---DIRKIAEMAHAHGALLLVDNSIMSPV------ 182 (301)
Q Consensus 126 -----~----~d~~~l~~~l~~----~~~~v~i~~~~np~G-~~~---~l~~l~~l~~~~~~~li~D~~~~~~~------ 182 (301)
+ -|++.+++++++ ++.+|.++.++|..| ... ++++|.++|++||+.+|+|.++..+.
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~ 230 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKE 230 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcc
Confidence 1 189999999874 345677777888774 443 68999999999999999999987651
Q ss_pred -----ccCcc-------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc-C----CCCCHHhHHHHHc
Q 022194 183 -----LSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G----SGLAPFDCWICLR 245 (301)
Q Consensus 183 -----~~~~~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~ 245 (301)
..... ....|.+++|++|.+.++. +|+++++++.+.++++...-.+ | .+++.....++..
T Consensus 231 re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~---GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAv 307 (460)
T PRK13237 231 REEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI---GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAI 307 (460)
T ss_pred cccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC---ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHh
Confidence 11111 1247999999999987653 6999999999999887764333 2 2333323333333
Q ss_pred cccc-H-HHHHHHHHHHHHHHHHHHHhC
Q 022194 246 GVKT-M-ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 246 ~l~~-~-~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++.+ . .++.+...+++++|.+.|.+.
T Consensus 308 gl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 308 GIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 3332 2 256677778888999998764
No 274
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.69 E-value=2.1e-15 Score=145.58 Aligned_cols=161 Identities=17% Similarity=0.112 Sum_probs=121.7
Q ss_pred hHHHHHHHHHhhcCCC--c-eEEecch-HHHHHHH-Hhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 56 TRDALESLLAKLDKAD--R-ALCFTSG-MAALAAV-THL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~-~i~~~sG-~~ai~~~-~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
..++.++.+++++|++ + .+++++| |++++.+ ..+ +++||+|+++...|++....+ ..++..|+++++++.+
T Consensus 79 ~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~-~~a~~~G~~v~~v~~~~~ 157 (805)
T PLN02724 79 TIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIR-EYALEKGAAAIAVDIEEA 157 (805)
T ss_pred HHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHH-HHHHHcCCeEEeccchhc
Confidence 3788999999999974 3 3566655 6888744 444 678999999888888776444 6667789999888754
Q ss_pred -----------C--HHHHHhhc----------CCCceEEEEeCCCCCccccccHHHHHHHHHHc-------C-CEEEEeC
Q 022194 128 -----------D--LDEVASAI----------GPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-------G-ALLLVDN 176 (301)
Q Consensus 128 -----------d--~~~l~~~l----------~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~-------~-~~li~D~ 176 (301)
+ .+++++.+ .+++++|.+++.+|.+|.+.|++++..+++.. | +++++|.
T Consensus 158 ~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDa 237 (805)
T PLN02724 158 ANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDA 237 (805)
T ss_pred cccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeeh
Confidence 1 14455543 14568999999999999999999775555432 3 5799999
Q ss_pred CcCCcccc-CccCCCCcEEEecccccccCCCCceeeEEEEcchh
Q 022194 177 SIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (301)
Q Consensus 177 ~~~~~~~~-~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~ 219 (301)
+++.+..+ +....++|++++|+||++++|.|+ |+++.+++.
T Consensus 238 aQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G~--G~L~vr~~~ 279 (805)
T PLN02724 238 AKGCGTSPPDLSRYPADFVVVSFYKIFGYPTGL--GALLVRRDA 279 (805)
T ss_pred hhhcCCCCCChhhcCCCEEEEecceeccCCCCc--eEEEEehhh
Confidence 99998876 444678999999999999779884 888888653
No 275
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.69 E-value=1.6e-15 Score=138.75 Aligned_cols=181 Identities=17% Similarity=0.144 Sum_probs=123.4
Q ss_pred CeEEEcCCCCccHHHHHhhhcccCCc---EEEEecCC-----CHHHHHhhcC----CCceEEE--EeCCCCCccccccHH
Q 022194 94 EEIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIG----PWTKLVW--VESPTNPRQQICDIR 159 (301)
Q Consensus 94 ~~Vlv~~~~y~~~~~~~~~~~~~~g~---~~~~~~~~-----d~~~l~~~l~----~~~~~v~--i~~~~np~G~~~~l~ 159 (301)
..|++++-.|+++. +.+...|+ .++.++.+ |+++++++++ ++++.+. .+..++.+|.+.|++
T Consensus 210 ~~v~~S~~~H~S~~----kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~ 285 (522)
T TIGR03799 210 LAILVSERGHYSLG----KAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLD 285 (522)
T ss_pred eEEEECCCchHHHH----HHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHH
Confidence 46888888998886 34444444 56666654 7899988875 3444443 346677899999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCccccCc------cC-CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh----h
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLSRP------LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----Q 228 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~~~------~~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~----~ 228 (301)
+|+++|+++|+|+++|.+|+.+....+ .. .++|.++.|.||++.+|.| .|+++.+++...+.+... .
T Consensus 286 eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl~ 363 (522)
T TIGR03799 286 EMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYIL 363 (522)
T ss_pred HHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchhc
Confidence 999999999999999999987654322 12 2689999999999989877 488888766554433221 0
Q ss_pred h-h--------cCCCCC--HHhHHHHHccc--ccHHHHHHHHHHHHHHHHHHHHhCCCcceEecC
Q 022194 229 N-A--------EGSGLA--PFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 280 (301)
Q Consensus 229 ~-~--------~~~~~~--~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p 280 (301)
. . ...+-. ....|+.++.+ .-+++.+++..+.++++.+.|++.++++.+..|
T Consensus 364 ~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 364 RKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred CCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 0 0 001111 12244444443 236777888899999999999988776554443
No 276
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.68 E-value=6.1e-15 Score=129.20 Aligned_cols=213 Identities=23% Similarity=0.191 Sum_probs=130.8
Q ss_pred CCchHHHHH----HHHHhhcCCC----ceEE-ecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHH-hhhc-----cc
Q 022194 53 GNPTRDALE----SLLAKLDKAD----RALC-FTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLL-SRVT-----PK 116 (301)
Q Consensus 53 g~~~~~~l~----~~l~~~~~~~----~~i~-~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~-~~~~-----~~ 116 (301)
|....++++ ++++++|+++ .+-+ .-||+.|. .++.++++|||+|+..++.++++...- ..-. ..
T Consensus 60 G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 60 GCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp STHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred CcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhccccccccccccccccccc
Confidence 444455544 5577889988 4333 57888776 588889999999998888776664210 0000 00
Q ss_pred CCcEEEEecCC------CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC-----Ccccc
Q 022194 117 TGVVVKRVNTC------DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLS 184 (301)
Q Consensus 117 ~g~~~~~~~~~------d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~-----~~~~~ 184 (301)
...+...++.+ |.|++++.+. .++++|++....+| ...|++++.++|++.|+++++|.+|. .+.++
T Consensus 140 ~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~ 217 (399)
T PF00464_consen 140 LYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFP 217 (399)
T ss_dssp HHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-
T ss_pred ceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhcc--CccCHHHHHHHHHhcCcEEEecccccccceehheec
Confidence 11234343332 8899988876 58999998877765 46799999999999999999999996 45677
Q ss_pred CccCCCCcEEEecccccccCCCCceeeEEEEc-------------chhHHHHHHHhhhhcC-CCCCHHhH----HHHHcc
Q 022194 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVK-------------GERLAKELYFLQNAEG-SGLAPFDC----WICLRG 246 (301)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~ 246 (301)
+|+.. +|++++|.||+|.|| ++|+|+++ ++.+.+++........ .+...... .++.+.
T Consensus 218 ~P~~~-ADvvt~sThKtl~GP---rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea 293 (399)
T PF00464_consen 218 NPFPY-ADVVTGSTHKTLRGP---RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEA 293 (399)
T ss_dssp -GCCT-SSEEEEESSGGG-SS---S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH
T ss_pred Ccccc-ceEEEeecccccccc---CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcc
Confidence 88876 999999999999988 57999998 4567665554332211 11111111 112222
Q ss_pred cc-cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 247 VK-TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 247 l~-~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+. .+.++.++..+|++.|.+.|++.
T Consensus 294 ~~~~fk~Ya~qVv~NAk~La~~L~~~ 319 (399)
T PF00464_consen 294 LSPEFKEYAKQVVKNAKALAEALQER 319 (399)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 32 35788899999999999999986
No 277
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.68 E-value=1.7e-15 Score=136.68 Aligned_cols=251 Identities=18% Similarity=0.178 Sum_probs=157.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
..++||.++ +.++|..+ |.+......+.+ . .. .+ .+..+...++.++|.+.+ +.+.+++++||++|+...+
T Consensus 50 ~~~lD~~~g~~~~~lGh~~-p~i~~a~~~~~~--~-~~-~~-~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Ai 123 (426)
T PRK00062 50 NEYIDYVGSWGPMILGHAH-PEVVEAVIEAAE--K-GL-SF-GAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAI 123 (426)
T ss_pred CEEEEcccchhhhhcCCCC-HHHHHHHHHHHH--h-CC-cC-CCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHH
Confidence 478888744 36789854 444433222221 1 11 11 113355778889988876 5567888999999986443
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHhhhcc----------cCCc------EEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLSRVTP----------KTGV------VVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~----------~~g~------~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
.+ ...+++|+..++.||+.......... ..+. ....++..|++.+++.+. +++++|++
T Consensus 124 k~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiiv 203 (426)
T PRK00062 124 RLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIV 203 (426)
T ss_pred HHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 33 33467899999999997532211100 0111 123344457888888774 47889999
Q ss_pred eCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccccC---ccCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 146 ESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 146 ~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~~---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
+.....+|.+.+ +++|.++|++||+++|+||+|....... ....+....+.+++|.+++ |++.|++++++
T Consensus 204 Epv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi~~~gK~l~~--G~p~ga~~~~~- 280 (426)
T PRK00062 204 EPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDLTTLGKIIGG--GLPVGAFGGRR- 280 (426)
T ss_pred eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcchHhhhhHhhC--CCcceeeeEHH-
Confidence 977777898877 9999999999999999999987331111 1122333345789999963 45678887764
Q ss_pred hHHHHHHHh---hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 219 RLAKELYFL---QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 219 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
.+.+.+... ....+.+.++..+++++..++.+. +..++..++.+++++.|++
T Consensus 281 ~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~ 337 (426)
T PRK00062 281 EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKE 337 (426)
T ss_pred HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 455544311 122334567777777777776653 2556666666666666653
No 278
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.2e-15 Score=122.21 Aligned_cols=199 Identities=17% Similarity=0.191 Sum_probs=147.9
Q ss_pred ceEEecchH-HHHHHHHh-ccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcC--CCce
Q 022194 72 RALCFTSGM-AALAAVTH-LLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~-~ai~~~~~-~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~--~~~~ 141 (301)
+.++++-|+ +.|.++++ .+.|| ++|+...|.|.-|. --+...+++++.++.. +.|.+.+.+. ..++
T Consensus 87 dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK 162 (375)
T KOG0633|consen 87 DNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIK 162 (375)
T ss_pred cceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE----EEeecCCceEEEecCCCCccccHHHHHHHHhccccce
Confidence 678888888 77866655 58888 89999999998774 5567788999998875 7788888876 3789
Q ss_pred EEEEeCCCCCccccccHHHHHHHHHHc-CCEEEEeCCcCC--c---cccCccCCCCcEEEecccccccCCCCceeeEEEE
Q 022194 142 LVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMS--P---VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAV 215 (301)
Q Consensus 142 ~v~i~~~~np~G~~~~l~~l~~l~~~~-~~~li~D~~~~~--~---~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~ 215 (301)
++++++|.||||.....+.|.++.+.. |+++++||+|-. | .......+..-+++.++||.| |.+|+|.|+-+.
T Consensus 163 ~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsf-GLAGiRvG~~~~ 241 (375)
T KOG0633|consen 163 CIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSF-GLAGIRVGYGAF 241 (375)
T ss_pred EEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhc-CcceeEeecccc
Confidence 999999999999999888888887764 799999999853 2 223344567789999999999 789999999988
Q ss_pred cchhHHHHHHHhhhhcCC-CCCHHhHHHHHc--ccccHHHHHHHHHHHHHHHHHHHHhCCCcce
Q 022194 216 KGERLAKELYFLQNAEGS-GLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~ 276 (301)
+. .+.+.+......+.. ......+..++. ..+.++..++.+.+.+.++...|...+.+..
T Consensus 242 ~~-~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~ 304 (375)
T KOG0633|consen 242 PL-SIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLND 304 (375)
T ss_pred cH-HHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccC
Confidence 74 455544444333221 122222222333 3455777788888888889888888876643
No 279
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=5.1e-15 Score=133.80 Aligned_cols=265 Identities=13% Similarity=0.090 Sum_probs=158.5
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~ 86 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ ...........++...++.+.|.+.... +.+.+++||++|+.+.
T Consensus 41 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~ql~--~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~A 117 (443)
T PRK08360 41 NEYIDFLSDAAVQNVGHNNPRVVKAIK-EQTD--KLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGA 117 (443)
T ss_pred CEEEEccccHhhcccCCCCHHHHHHHH-HHHH--hccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHH
Confidence 478888644 5568887766655432 2211 1111111111345578888889888753 4678889999998644
Q ss_pred Hhc---cCCCCeEEEcCCCCccHHHHHhhhcc-------cCC--cEEEEecCC-----------------CHHHHHhhcC
Q 022194 87 THL---LGTGEEIVAGDDLYGGTDRLLSRVTP-------KTG--VVVKRVNTC-----------------DLDEVASAIG 137 (301)
Q Consensus 87 ~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~-------~~g--~~~~~~~~~-----------------d~~~l~~~l~ 137 (301)
+.+ .....+|+.....||+.......... ..+ ..+..++.. +++.+++.+.
T Consensus 118 lklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (443)
T PRK08360 118 IKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFE 197 (443)
T ss_pred HHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHH
Confidence 443 33456788888889887422111100 001 112222211 2334555552
Q ss_pred -----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccC---ccCCCCcEEEecccccccC
Q 022194 138 -----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSR---PLELGADIVMHSATKFIAG 204 (301)
Q Consensus 138 -----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~---~~~~~~di~~~S~sK~~~g 204 (301)
+++++|+++..+|++|.+.+ +++|.++|++||+++|+||+|... .... ....+.+..+.+++|.++
T Consensus 198 ~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~- 276 (443)
T PRK08360 198 GEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLG- 276 (443)
T ss_pred hccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEeccccc-
Confidence 57899999988899998764 899999999999999999998732 2221 112233223447899995
Q ss_pred CCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----CCCcceEe
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVN 278 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~~~v~~v~ 278 (301)
+|++.|++++++ .+.+.+.......+...++..+.++...++.+. +..++..++.+++++.|++ ++.+..++
T Consensus 277 -~G~pigav~~~~-~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr 354 (443)
T PRK08360 277 -GGLPISATIGRA-EIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVR 354 (443)
T ss_pred -CCceeEEEEEcH-HHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeee
Confidence 468899998874 455544333333445567777777777766653 3445666666666666653 44444444
Q ss_pred cCC
Q 022194 279 YAG 281 (301)
Q Consensus 279 ~p~ 281 (301)
.-|
T Consensus 355 g~G 357 (443)
T PRK08360 355 GIG 357 (443)
T ss_pred ccc
Confidence 333
No 280
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=3.5e-15 Score=134.66 Aligned_cols=256 Identities=13% Similarity=0.101 Sum_probs=155.7
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ .........+.++...++.+.|.+.+. .+.+.+++||++|+.+.
T Consensus 42 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A 118 (423)
T PRK05964 42 RELIDAISSWWVATHGHNHPYIDQAIR-EQLD--RLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVA 118 (423)
T ss_pred CEEEEcchhHHhccCCCCCHHHHHHHH-HHHh--hCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHH
Confidence 478888644 4458887666554432 2211 111111112234567888899988873 46788899999998644
Q ss_pred Hhcc---------CCCCeEEEcCCCCccHHHHHhhhccc-----------CCcEEEEecCCC-----HHHHHhhcC---C
Q 022194 87 THLL---------GTGEEIVAGDDLYGGTDRLLSRVTPK-----------TGVVVKRVNTCD-----LDEVASAIG---P 138 (301)
Q Consensus 87 ~~~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~~-----------~g~~~~~~~~~d-----~~~l~~~l~---~ 138 (301)
+++. ..+.+|+.....||+........... .+......+..| .+.+++.+. +
T Consensus 119 ~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~ 198 (423)
T PRK05964 119 LKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAG 198 (423)
T ss_pred HHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCC
Confidence 4432 23468999999999875433221111 122333333334 777787774 5
Q ss_pred CceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccCc---cCCCCcEEEecccccccCCCCce
Q 022194 139 WTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSRP---LELGADIVMHSATKFIAGHSDVM 209 (301)
Q Consensus 139 ~~~~v~i~~-~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~~---~~~~~di~~~S~sK~~~g~~g~~ 209 (301)
++.+|+++. .+...|...+ +++|.++|++||+++|+||++... ..+.. ...+....+.+++|+++| +.+.
T Consensus 199 ~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~g-G~~p 277 (423)
T PRK05964 199 EIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTG-GYLP 277 (423)
T ss_pred cEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhc-Cccc
Confidence 677888887 5776777653 999999999999999999998532 11111 223444445578999954 3355
Q ss_pred eeEEEEcchhHHHHHHHh------hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 210 AGVLAVKGERLAKELYFL------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 210 ~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
.|+++.++ .+.+.+... ....+...++..++++...++.+. ...++..+..+++++.|++.
T Consensus 278 ~~av~~~~-~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l 346 (423)
T PRK05964 278 LAATLCTA-EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPF 346 (423)
T ss_pred ceEEEEcH-HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 77777764 455544321 112223457777777777776543 34566677777777777653
No 281
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.67 E-value=2.2e-15 Score=122.95 Aligned_cols=215 Identities=22% Similarity=0.307 Sum_probs=154.8
Q ss_pred chHHHHHHHHHhhcCCCceEEecchH-HHHHHHHhcc-CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGM-AALAAVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~-~ai~~~~~~~-~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
|...+|++..++++|.+..+|++||| ..+.+++.-+ ++|.+|++.+.+|--..+. ..+..-.|+.++.+...
T Consensus 56 ~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~-gg~s~l~gv~~~tv~~e~dgtm 134 (384)
T KOG1368|consen 56 PTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQ-GGISQLAGVHVRTVKNENDGTM 134 (384)
T ss_pred ccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEeccchheeehhc-cChhhhccceeEeeeeCCCCee
Confidence 56899999999999999999999998 4456777765 4899999988765322221 14455567777777654
Q ss_pred CHHHHHhhcC--------CCceEEEEeCCCCCcc-ccccH---HHHHHHHHHcCCEEEEeCCcCCcc---ccCcc---CC
Q 022194 128 DLDEVASAIG--------PWTKLVWVESPTNPRQ-QICDI---RKIAEMAHAHGALLLVDNSIMSPV---LSRPL---EL 189 (301)
Q Consensus 128 d~~~l~~~l~--------~~~~~v~i~~~~np~G-~~~~l---~~l~~l~~~~~~~li~D~~~~~~~---~~~~~---~~ 189 (301)
|++++|+++. +.+++|++++.+|.+| .+.|+ .++.++|+++|+.+++|.+.-.-+ ..-+. ..
T Consensus 135 ~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~ 214 (384)
T KOG1368|consen 135 DLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICS 214 (384)
T ss_pred eHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHH
Confidence 7999999987 3589999999998887 77774 557788999999999999953211 11111 12
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCC--CHHhHHHHHcccccHHHHHHHHHHHHHHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 267 (301)
..|-+-..+||.+++| .|.++..++.++.+.+..+...|.++ +...+++++-++++--...+.-.++++.+.++
T Consensus 215 ~fDSVsiCLSKglgAP----VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~~~L~~dHk~A~~lAe~ 290 (384)
T KOG1368|consen 215 AFDSVSICLSKGLGAP----VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENVPLLRADHKRAKELAEY 290 (384)
T ss_pred hhhhhhhhhhccCCCC----cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 3577777799999876 35555555788888888888877665 33445555666655433556667788888888
Q ss_pred HHhCCCc
Q 022194 268 LASHPRV 274 (301)
Q Consensus 268 l~~~~~v 274 (301)
+...+++
T Consensus 291 ~~~~~~i 297 (384)
T KOG1368|consen 291 INTPEEI 297 (384)
T ss_pred hccccce
Confidence 8866544
No 282
>PLN02263 serine decarboxylase
Probab=99.67 E-value=1.2e-14 Score=129.85 Aligned_cols=216 Identities=15% Similarity=0.155 Sum_probs=152.9
Q ss_pred HHHHHHHHHhhcCCC----ceEEecchHHHH-HHHHhc--cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD----RALCFTSGMAAL-AAVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~----~~i~~~sG~~ai-~~~~~~--~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
..++-+++++++|.+ ..+++++||+++ .++... ..+...|++++-.|+++. +.+...|++++.++.+
T Consensus 135 E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~----KAa~llgi~~~~Vp~d~~ 210 (470)
T PLN02263 135 EVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDTLVS 210 (470)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH----HHHHhcCCcceEeccCCC
Confidence 567778999999874 268888889886 344332 223346888888998886 6667788888888865
Q ss_pred ---CHHHHHhhcCCC---ceEEEEeCCCCCccccccHHHHHHHHHHcCC-----EEEEeCCcCCccccC-------ccCC
Q 022194 128 ---DLDEVASAIGPW---TKLVWVESPTNPRQQICDIRKIAEMAHAHGA-----LLLVDNSIMSPVLSR-------PLEL 189 (301)
Q Consensus 128 ---d~~~l~~~l~~~---~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~-----~li~D~~~~~~~~~~-------~~~~ 189 (301)
|.++|++++.++ +.+|+.+.+++++|.+.|+++|+++|+++|+ |+++|.+++....+. ....
T Consensus 211 g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~ 290 (470)
T PLN02263 211 GEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKK 290 (470)
T ss_pred CcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCc
Confidence 889999888633 5677778899999999999999999999997 999999998654421 1112
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHHHHH----Hhhh----hcC--CCCCHHhHHHHHcc--cccHHHHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY----FLQN----AEG--SGLAPFDCWICLRG--VKTMALRVEKQ 257 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~----~~~~----~~~--~~~~~~~~~~~~~~--l~~~~~~~~~~ 257 (301)
.+|-+..++||+++.|-+ .|+++.+++.+ ..+. .+.. ..+ .+......|+.++. .+.+.+++++.
T Consensus 291 ~vDSIsvD~HK~l~~P~~--cgvll~R~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~ 367 (470)
T PLN02263 291 PIGSVSVSGHKFVGCPMP--CGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKC 367 (470)
T ss_pred CccEEEECCccccCCCcC--EEEEEEehhhH-hhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 389999999999988765 68888885433 2111 1110 011 11123456665554 34578888999
Q ss_pred HHHHHHHHHHHHhCCCcceEecC
Q 022194 258 QDNAQKIAEFLASHPRVKKVNYA 280 (301)
Q Consensus 258 ~~~~~~l~~~l~~~~~v~~v~~p 280 (301)
.++++++.+.|+++ ++..+..|
T Consensus 368 ~~~A~~l~~~l~~~-g~~~~~~p 389 (470)
T PLN02263 368 LRNAHYLKDRLREA-GISAMLNE 389 (470)
T ss_pred HHHHHHHHHHHHhC-CCeEEeCC
Confidence 99999999999886 33333333
No 283
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.66 E-value=4.2e-15 Score=133.96 Aligned_cols=265 Identities=15% Similarity=0.164 Sum_probs=155.7
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~ 85 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ +.....+....++...++.+.|.+... .+.+.+++||++|+.+
T Consensus 33 ~~ylD~~~g~~~~~lGh~~p~v~~a~~-~ql~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~ 109 (420)
T TIGR00700 33 NRLIDFASGIAVLNIGHSHPRVVDAVR-TQVA--EFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVEN 109 (420)
T ss_pred CEEEECccCHHhccCCCCCHHHHHHHH-HHHH--hccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHH
Confidence 478888533 3447887666555432 2211 111112222244557788888888763 2568888999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhcc-----cCCc-----EEEEecCC----------------CHHHHHhhc
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP-----KTGV-----VVKRVNTC----------------DLDEVASAI 136 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~-----~~g~-----~~~~~~~~----------------d~~~l~~~l 136 (301)
.+.+ ...+.+|+....+||+.......+.. ..+. .+..++.. +++.+++.+
T Consensus 110 AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
T TIGR00700 110 AVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIF 189 (420)
T ss_pred HHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHH
Confidence 4443 33456788889999997643222111 0110 11112210 144566554
Q ss_pred -----CCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcccc----CccCCCCcEEEeccccccc
Q 022194 137 -----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 137 -----~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~di~~~S~sK~~~ 203 (301)
.+++.+|+++.....+|...+ +++|.++|++||+++|+||++...... .....+....+.+++|.++
T Consensus 190 ~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~ 269 (420)
T TIGR00700 190 VIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLA 269 (420)
T ss_pred HhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeecccc
Confidence 257889999988887888765 899999999999999999998743221 1122344444566999995
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHH----hCCCcceE
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA----SHPRVKKV 277 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~----~~~~v~~v 277 (301)
+|++.|++++++ .+.+.+.......+.+.++..++++++.++.+. ...++..+..+++++.|+ +++.+..+
T Consensus 270 --~G~pig~v~~~~-~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v 346 (420)
T TIGR00700 270 --DGLPLSGVTGRA-EIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV 346 (420)
T ss_pred --CCcceEEEEecH-HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence 468999999875 455544333333445567777777766655431 222333333344444443 34444444
Q ss_pred ecCC
Q 022194 278 NYAG 281 (301)
Q Consensus 278 ~~p~ 281 (301)
...|
T Consensus 347 rg~G 350 (420)
T TIGR00700 347 RGLG 350 (420)
T ss_pred eccc
Confidence 4443
No 284
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.66 E-value=2.6e-15 Score=133.56 Aligned_cols=150 Identities=15% Similarity=0.098 Sum_probs=111.6
Q ss_pred HHHHHHHHHhhcCCC---ceEEec-chHHHHH-HHHhccCC-CCeEEEcCCCCccHHHHHhh-hcccCCc-EEEEecCC-
Q 022194 57 RDALESLLAKLDKAD---RALCFT-SGMAALA-AVTHLLGT-GEEIVAGDDLYGGTDRLLSR-VTPKTGV-VVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~-sG~~ai~-~~~~~~~~-g~~Vlv~~~~y~~~~~~~~~-~~~~~g~-~~~~~~~~- 127 (301)
.++.++.++++++.+ ++++++ |||.++. ++..++++ ++.|++ ...|+.- |.. ..+..|. +++.+..+
T Consensus 50 ~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~---~~~~~~~~~g~~~v~~~~~~~ 125 (378)
T PRK03080 50 LKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK---WATDVVKQLKLEDPRVLEADY 125 (378)
T ss_pred HHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH---HHHHHHhhcCCCCceEeccCC
Confidence 788889999999963 466665 7789986 55666764 444444 4454442 223 3356677 77776643
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEeccccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~ 203 (301)
|++++ +. +++|.+++..|.||...|+++|++ |++|+++++|.+++.|..+-.... .|++++|.+|+++
T Consensus 126 g~~~d~~~i----~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~-iD~~~~s~~K~l~ 197 (378)
T PRK03080 126 GSLPDLSAV----DF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK-LDVYTFSWQKVLG 197 (378)
T ss_pred CCCCCHhhc----CC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH-CcEEEEehhhhCC
Confidence 44443 22 567899999999999999999999 889999999999999987644433 7999999999999
Q ss_pred CCCCceeeEEEEcchhH
Q 022194 204 GHSDVMAGVLAVKGERL 220 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~ 220 (301)
+|+| .|+++.+++.+
T Consensus 198 ~P~G--~g~l~v~~~~~ 212 (378)
T PRK03080 198 GEGG--HGMAILSPRAV 212 (378)
T ss_pred CCCc--eEEEEECHHHH
Confidence 9888 49998886544
No 285
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.66 E-value=6.7e-15 Score=132.44 Aligned_cols=265 Identities=14% Similarity=0.117 Sum_probs=162.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCC--CceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKA--DRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~ 85 (301)
..+|||.++ +.-+|..++.+..+.. .+.+ ... ..+.+ ..+...++.+.|.+++.. +.+++++||++|+.+
T Consensus 75 ~~ylD~~~g~~~~~lGh~hp~v~~Av~-~ql~--~l~--~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~ 149 (442)
T TIGR03372 75 NEFIDCLGGFGIFNVGHRNPNVIAAVE-NQLA--KQP--LHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEA 149 (442)
T ss_pred CEEEECCccHHhhhcCCCCHHHHHHHH-HHHH--hCC--CcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHH
Confidence 478998755 5568977777665432 2211 111 11222 456688899999988743 457788999999864
Q ss_pred HHhccC------CCCeEEEcCCCCccHHHHHhhhcc---------cCCcEEEEecCCCHHHHHhhcC------CCceEEE
Q 022194 86 VTHLLG------TGEEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIG------PWTKLVW 144 (301)
Q Consensus 86 ~~~~~~------~g~~Vlv~~~~y~~~~~~~~~~~~---------~~g~~~~~~~~~d~~~l~~~l~------~~~~~v~ 144 (301)
.+.+.+ .+.+|+.....||+.......... ...-.+..++..|.+.+++.++ .++.+|+
T Consensus 150 AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavI 229 (442)
T TIGR03372 150 ALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAII 229 (442)
T ss_pred HHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEE
Confidence 444321 346799999999998533211111 0112245566667877776663 4678999
Q ss_pred EeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-Ccccc---CccCCCCcEEEecccccccCCCCceeeEEEEc
Q 022194 145 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (301)
Q Consensus 145 i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~ 216 (301)
++......|...| +++|.++|++||+++|+||++. .|..+ .....+....+.+++|.+++. -+..|.++++
T Consensus 230 vEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg~G-~~Pigavv~~ 308 (442)
T TIGR03372 230 LEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGG-VMPIGATIAT 308 (442)
T ss_pred EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhcCC-cccceEEEec
Confidence 9988887888876 9999999999999999999985 22222 122234333344599999642 1235666666
Q ss_pred chhHHHHHHHh--hhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHHh----CC-CcceEecCCC
Q 022194 217 GERLAKELYFL--QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HP-RVKKVNYAGL 282 (301)
Q Consensus 217 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~----~~-~v~~v~~p~~ 282 (301)
+ .+.+.+... .+..+.+-++..++++++.++.+.+ ..++..+..+++++.|++ ++ .+..++..|+
T Consensus 309 ~-~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl 382 (442)
T TIGR03372 309 E-AVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGL 382 (442)
T ss_pred H-HHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceE
Confidence 4 454544211 2223344478888888888777642 245555555666666654 45 4455555544
No 286
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.66 E-value=4.4e-15 Score=133.71 Aligned_cols=263 Identities=12% Similarity=0.079 Sum_probs=154.9
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~ 85 (301)
..++||.++ +.-+|..++.+..+.. .+.+ ......+....++...++.+.|.+... .+.+++++||++|+.+
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~ql~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~ 116 (421)
T PRK09792 40 NEYIDFAAGIAVLNTGHRHPDLVAAVE-QQLQ--QFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVEN 116 (421)
T ss_pred CEEEEccCchhhhcCCCCCHHHHHHHH-HHHH--hccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHH
Confidence 467887533 2347877655554432 2211 111112222245567788888888763 2478888999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhcc-----c-------CCcEEEEecC--------CCHHHHHhhcC-----
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP-----K-------TGVVVKRVNT--------CDLDEVASAIG----- 137 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~-----~-------~g~~~~~~~~--------~d~~~l~~~l~----- 137 (301)
.+.+ .....+|+.....||+.......... . .++....++. ++++.+++.+.
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (421)
T PRK09792 117 AVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEA 196 (421)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCC
Confidence 4443 23446789999999997533211100 1 1112222221 13467777764
Q ss_pred CCceEEEEeCCCCCccccc-c---HHHHHHHHHHcCCEEEEeCCcCCccc-cC---ccCCCCcEEEecccccccCCCCce
Q 022194 138 PWTKLVWVESPTNPRQQIC-D---IRKIAEMAHAHGALLLVDNSIMSPVL-SR---PLELGADIVMHSATKFIAGHSDVM 209 (301)
Q Consensus 138 ~~~~~v~i~~~~np~G~~~-~---l~~l~~l~~~~~~~li~D~~~~~~~~-~~---~~~~~~di~~~S~sK~~~g~~g~~ 209 (301)
+++++|+++..++++|... | +++|.++|++||+++|+||+++.... .. ....+....+.+++|.++ +|++
T Consensus 197 ~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~--~G~p 274 (421)
T PRK09792 197 KQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLA--GGMP 274 (421)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhc--CCCc
Confidence 4688999998899999764 5 89999999999999999999864322 11 112233344678999995 3578
Q ss_pred eeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHH----hCCCcceEec
Q 022194 210 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA----SHPRVKKVNY 279 (301)
Q Consensus 210 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~----~~~~v~~v~~ 279 (301)
.|++++++ .+.+.+.......+...++..+++++..++.+. +..++..+..+++.+.|+ ++|.+..+..
T Consensus 275 igav~~~~-~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG 349 (421)
T PRK09792 275 LSGVVGNA-NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRG 349 (421)
T ss_pred eEEEEEcH-HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecc
Confidence 89998864 444433322333445567777776655555442 233344444444555443 3555544444
No 287
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.65 E-value=8.7e-15 Score=132.57 Aligned_cols=264 Identities=14% Similarity=0.141 Sum_probs=162.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcC--CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDK--ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~ 85 (301)
.+++||.++ +.-+|..++.+..+.. .+.+. ... ++.. ..+...++.+.|.+++. .+.+.+++||++|+.+
T Consensus 82 ~~ylD~~~g~~~~~lGH~~p~v~~Ai~-~ql~~--l~~--~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~ 156 (459)
T PRK11522 82 QEFIDCLGGFGIFNVGHRNPVVVSAVQ-NQLAK--QPL--HSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEA 156 (459)
T ss_pred CEEEECCcCHHhhhcCCCCHHHHHHHH-HHHhh--Ccc--cccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHH
Confidence 478898644 4568877766665432 22221 111 1122 35668888999988864 3467888999999864
Q ss_pred HHhccC-----C-CCeEEEcCCCCccHHHHHhhhcccC---------CcEEEEecCCCHHHHHhhcC------CCceEEE
Q 022194 86 VTHLLG-----T-GEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCDLDEVASAIG------PWTKLVW 144 (301)
Q Consensus 86 ~~~~~~-----~-g~~Vlv~~~~y~~~~~~~~~~~~~~---------g~~~~~~~~~d~~~l~~~l~------~~~~~v~ 144 (301)
.+.+.+ + ..+|+.....||+............ .-.+..++..|.+++++.+. +++.+|+
T Consensus 157 AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavI 236 (459)
T PRK11522 157 ALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVI 236 (459)
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEE
Confidence 444322 1 3468888999999753321111110 11233455557888877764 3578999
Q ss_pred EeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-cccc---CccCCCCcEEEecccccccCCCCceeeEEEEc
Q 022194 145 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (301)
Q Consensus 145 i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~ 216 (301)
++......|.+.| ++++.++|++||+++|+||++.. |..+ .....|....+.+++|.+++. -+..|.++++
T Consensus 237 vEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggG-~~Pigav~~~ 315 (459)
T PRK11522 237 LEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGG-VMPIGATIAT 315 (459)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhhCC-CccceeEEEc
Confidence 9988888888876 99999999999999999999852 2222 122234333344799999652 1235666666
Q ss_pred chhHHHHHHH--hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----CC-CcceEecCC
Q 022194 217 GERLAKELYF--LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HP-RVKKVNYAG 281 (301)
Q Consensus 217 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~~-~v~~v~~p~ 281 (301)
++ +.+.+.. ..+..+.+-+|..+++++..++.+. +..++..++.+++++.|++ +| .+..|+..|
T Consensus 316 ~~-i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~G 388 (459)
T PRK11522 316 EE-VFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKG 388 (459)
T ss_pred HH-HHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEece
Confidence 44 4443321 1222333447888888877777653 3456667777777777764 44 344455444
No 288
>PLN02880 tyrosine decarboxylase
Probab=99.65 E-value=1.2e-14 Score=132.51 Aligned_cols=215 Identities=18% Similarity=0.217 Sum_probs=143.6
Q ss_pred HHHHHHHHHhhcCCCc---------eEEecchHHHH-HHHHhc----cC-------CCCeEEEcCCCCccHHHHHhhhcc
Q 022194 57 RDALESLLAKLDKADR---------ALCFTSGMAAL-AAVTHL----LG-------TGEEIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~---------~i~~~sG~~ai-~~~~~~----~~-------~g~~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
..++.+++++++|.++ .+++++||++. .++... ++ +.-.|++++-.|++.. +.+.
T Consensus 124 E~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~----Kaa~ 199 (490)
T PLN02880 124 EMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQ----KACQ 199 (490)
T ss_pred HHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHH----HHHH
Confidence 6677799999998764 56777778775 333221 11 1224667888888886 5555
Q ss_pred cCCcE---EEEecCC-------CHHHHHhhcCC------CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 116 KTGVV---VKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 116 ~~g~~---~~~~~~~-------d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
..|+. ++.++.+ |++.|++++.+ .+.+|+.+..+..+|.+.|+++|+++|++||+|++||.+|+
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~g 279 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYA 279 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhH
Confidence 66652 3444432 78888888852 35677778888999999999999999999999999999999
Q ss_pred CccccCc------cC-CCCcEEEecccccccCCCCceeeEEEEcchhHH-HHHHH----hhhh----------cCCCC--
Q 022194 180 SPVLSRP------LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYF----LQNA----------EGSGL-- 235 (301)
Q Consensus 180 ~~~~~~~------~~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~-~~~~~----~~~~----------~~~~~-- 235 (301)
.+....+ .. .++|.++.++|||+..|.+ .|+++.++.... +.+.. +... ..+++
T Consensus 280 g~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~--~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~ 357 (490)
T PLN02880 280 GSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD--CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPL 357 (490)
T ss_pred HHHHhCHHHHHHhcCchhcCEEEECchhhcCCCcc--EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCC
Confidence 7754321 11 3589999999999988866 588887754321 21110 0000 00011
Q ss_pred ----CHHhHHHHHc--ccccHHHHHHHHHHHHHHHHHHHHhCCCcceE
Q 022194 236 ----APFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (301)
Q Consensus 236 ----~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v 277 (301)
.....|..++ +.+.+.+++++..+.++++.+.|++.++++.+
T Consensus 358 ~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~ 405 (490)
T PLN02880 358 GRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVV 405 (490)
T ss_pred CCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 1233443433 44557788888889999999999887765443
No 289
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.65 E-value=8.7e-15 Score=129.32 Aligned_cols=265 Identities=15% Similarity=0.136 Sum_probs=167.3
Q ss_pred ceeeecCC--CCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHH
Q 022194 11 TLLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~--~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~ 85 (301)
..+|||.+ ..--+|..+|.++.+.. .+.+........|. -.+...++.+.|.+... .+.+++.+||++|+.+
T Consensus 56 ~~ylDf~sgi~v~~~GH~hP~Vv~Av~-~q~~~~~h~~~~~~--~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~ 132 (447)
T COG0160 56 NEYLDFLSGIAVLNLGHNHPRVVEAVK-RQLAKLNHTHTRDL--YYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEA 132 (447)
T ss_pred CEEEEcccCcchhccCCCCHHHHHHHH-HHHHHhhcccCCcc--cchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHH
Confidence 47888874 23347876665555432 22221111111111 12557788888888764 3468889999999964
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhh----------cccCCcEEEEecCC-----------------CHHHHHhh
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRV----------TPKTGVVVKRVNTC-----------------DLDEVASA 135 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~----------~~~~g~~~~~~~~~-----------------d~~~l~~~ 135 (301)
.+.+ ...+..|+.+..+||+.....-.+ .....-.+..++.. ..+.++..
T Consensus 133 AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~ 212 (447)
T COG0160 133 AIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERA 212 (447)
T ss_pred HHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHH
Confidence 4443 445678999999999875332111 11111124444422 12334443
Q ss_pred cC------CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC----CccccCccCCCCcEEEeccccc
Q 022194 136 IG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGADIVMHSATKF 201 (301)
Q Consensus 136 l~------~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~----~~~~~~~~~~~~di~~~S~sK~ 201 (301)
+. .++.+++++......|.+.+ ++++.++|++||+++|+||++. +|.++.....|....+.+++|.
T Consensus 213 i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ 292 (447)
T COG0160 213 LFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKS 292 (447)
T ss_pred HHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEeccc
Confidence 32 36889999999998888864 8999999999999999999986 3455555566666666669999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHH----hCCCcc
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA----SHPRVK 275 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~----~~~~v~ 275 (301)
+++ |+..+.++.+++ +.. +.......++.-++.++++++..++.+. ...++..+.-+++++.|. ++|.|.
T Consensus 293 ig~--G~Pl~avv~r~e-i~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~Ig 368 (447)
T COG0160 293 LGG--GLPLSAVVGRAE-IMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIG 368 (447)
T ss_pred ccC--CCceeEEeccHH-hcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCcee
Confidence 965 778899988754 444 4444444456678888888888877653 244445555555555554 356666
Q ss_pred eEecCCC
Q 022194 276 KVNYAGL 282 (301)
Q Consensus 276 ~v~~p~~ 282 (301)
.|+.-|+
T Consensus 369 dVRG~Gl 375 (447)
T COG0160 369 DVRGLGL 375 (447)
T ss_pred cccccce
Confidence 6666554
No 290
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=6.9e-15 Score=132.34 Aligned_cols=266 Identities=13% Similarity=0.088 Sum_probs=159.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC---CceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai~~ 85 (301)
.+++||.++ +--+|..++.+..+.. .+.+ +........+.++...++.+.|.+.+.. +.+++++||++|+.+
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~ql~--~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~ 116 (425)
T PRK07495 40 RRYIDFAAGIAVVNTGHRHPRVIAAVK-AQLD--RFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVEN 116 (425)
T ss_pred CEEEEccccHHhhccCCCCHHHHHHHH-HHHh--hccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHH
Confidence 468888533 2247887666555432 2211 1111111122445678888999888742 468888999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhcc-----cCC-----cEEEEecCC----------CHHHHHhhcC-----
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP-----KTG-----VVVKRVNTC----------DLDEVASAIG----- 137 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~-----~~g-----~~~~~~~~~----------d~~~l~~~l~----- 137 (301)
.+.+ .....+|+.....||+.......+.. ..+ ..+..++.. .++.+++.+.
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~ 196 (425)
T PRK07495 117 AVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDP 196 (425)
T ss_pred HHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCC
Confidence 4433 33456799889999997533211100 000 122233322 1445566653
Q ss_pred CCceEEEEeCCCCCccccc-c---HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEecccccccCCCCce
Q 022194 138 PWTKLVWVESPTNPRQQIC-D---IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSATKFIAGHSDVM 209 (301)
Q Consensus 138 ~~~~~v~i~~~~np~G~~~-~---l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~S~sK~~~g~~g~~ 209 (301)
+++++|+++.....+|... | +++|.++|++||+++|+||++... ... .....+....+.+++|.+++ |++
T Consensus 197 ~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~--G~p 274 (425)
T PRK07495 197 QRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAG--GFP 274 (425)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcC--Ccc
Confidence 4688999987776677553 2 899999999999999999998632 111 12234566678889999953 577
Q ss_pred eeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----CCCcceEecCCC
Q 022194 210 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGL 282 (301)
Q Consensus 210 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~~~v~~v~~p~~ 282 (301)
.|++++++ .+.+.+.......+...++..++++...++.+. +..++..+..+++++.|++ +|.+..++..|+
T Consensus 275 igav~~~~-~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 352 (425)
T PRK07495 275 LAAVTGRA-EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGF 352 (425)
T ss_pred ceEEEEcH-HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCce
Confidence 89998875 454443332333445667777777766666653 2345555555566666553 455555555553
No 291
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.65 E-value=1.5e-14 Score=130.64 Aligned_cols=232 Identities=13% Similarity=0.107 Sum_probs=140.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccC-CCCchHHHHHHHHHhhcCC---CceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTR-SGNPTRDALESLLAKLDKA---DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~-~g~~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai~ 84 (301)
..++||.++ +.-+|..++.+..+.. .+.+ . ..+.+.. .+++...++.+.+.+..+. +.+++++||++|+.
T Consensus 41 ~~~lD~~~g~~~~~lGh~~~~i~~a~~-~~~~--~-~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e 116 (425)
T PRK08088 41 REYLDFAGGIAVLNTGHLHPKVVAAVE-AQLK--K-LSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVE 116 (425)
T ss_pred CEEEEcCCchhhcCCCCCCHHHHHHHH-HHHh--h-CCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 467888532 2237776555554322 1111 1 1122222 2456667888888887653 47889999998774
Q ss_pred HHHhc---cCCCCeEEEcCCCCccHHHHHhhhccc-----CC-------cEEEEecCC--------CHHHHHhhcC----
Q 022194 85 AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPK-----TG-------VVVKRVNTC--------DLDEVASAIG---- 137 (301)
Q Consensus 85 ~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~-----~g-------~~~~~~~~~--------d~~~l~~~l~---- 137 (301)
..+.+ ...+..|+...++||+........-.. .+ +....++.+ +++.+++.+.
T Consensus 117 ~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 196 (425)
T PRK08088 117 NAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAA 196 (425)
T ss_pred HHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccC
Confidence 33222 333456777799999986543222110 01 111111111 1456777764
Q ss_pred -CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccc-cC---ccCCCCcEEEecccccccCCCCc
Q 022194 138 -PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL-SR---PLELGADIVMHSATKFIAGHSDV 208 (301)
Q Consensus 138 -~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~~---~~~~~~di~~~S~sK~~~g~~g~ 208 (301)
+++++|+++......|.+.+ +++|.++|++||+++|+||+|+.... .. ....+.+..+.||||.++ +|+
T Consensus 197 ~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~--~G~ 274 (425)
T PRK08088 197 PEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIA--GGF 274 (425)
T ss_pred CCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEecccc--CCC
Confidence 46788888877665566654 89999999999999999999874222 11 113355677899999995 468
Q ss_pred eeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc
Q 022194 209 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (301)
Q Consensus 209 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 249 (301)
+.|+++++. .+.+.+...........++..+.++...++.
T Consensus 275 rig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~ 314 (425)
T PRK08088 275 PLAGVTGRA-EVMDAIAPGGLGGTYAGNPIACAAALAVLKV 314 (425)
T ss_pred cceeeEecH-HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999874 4555444333444455677777776666554
No 292
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=8.1e-15 Score=131.99 Aligned_cols=254 Identities=12% Similarity=0.073 Sum_probs=154.9
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~ 85 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ +.....+..+.++...++.+.|.++.. .+.+.+++||++|+.+
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~ql~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~ 116 (421)
T PRK06777 40 REYIDFAAGIAVLNTGHRHPKVVAAVR-QQLD--QFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVEN 116 (421)
T ss_pred CEEEEcccCHHhhccCCCCHHHHHHHH-HHHh--hcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHH
Confidence 478888533 2347877666554432 2211 112122222244567788888888764 3578889999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhccc---C--C-----cEEEEecCC----------CHHHHHhhcC-----
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPK---T--G-----VVVKRVNTC----------DLDEVASAIG----- 137 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~---~--g-----~~~~~~~~~----------d~~~l~~~l~----- 137 (301)
.+++ .....+|+.....||+.......+... . + -.+..++.. +++.+++.+.
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (421)
T PRK06777 117 AVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAP 196 (421)
T ss_pred HHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCC
Confidence 4443 334567998999999986442211110 0 0 001111111 2556676663
Q ss_pred CCceEEEEeCCCCCcccc-cc---HHHHHHHHHHcCCEEEEeCCcCCccc-c---CccCCCCcEEEecccccccCCCCce
Q 022194 138 PWTKLVWVESPTNPRQQI-CD---IRKIAEMAHAHGALLLVDNSIMSPVL-S---RPLELGADIVMHSATKFIAGHSDVM 209 (301)
Q Consensus 138 ~~~~~v~i~~~~np~G~~-~~---l~~l~~l~~~~~~~li~D~~~~~~~~-~---~~~~~~~di~~~S~sK~~~g~~g~~ 209 (301)
+++.+|+++...+..|.. .+ +++|.++|++||+++|+||++..... . .....+....+.+++|.++ +|++
T Consensus 197 ~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~--~G~p 274 (421)
T PRK06777 197 DQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLG--GGMP 274 (421)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhc--CCCc
Confidence 467899999888877864 33 99999999999999999999873211 1 1122333333457999995 4688
Q ss_pred eeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 210 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 210 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
.|++++++ .+.+.+.......+...++..+++++..++.++ +..++..++.+++.+.|++
T Consensus 275 igav~~~~-~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~ 336 (421)
T PRK06777 275 ISAVVGRA-EVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEK 336 (421)
T ss_pred eEEEEEcH-HHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 99999874 455544333333445567777777777776542 3455666666777777765
No 293
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=1.2e-14 Score=131.52 Aligned_cols=266 Identities=14% Similarity=0.107 Sum_probs=158.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC---CceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai~~ 85 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ .........+.++...++.+.|++.+.. +.+.+++||++|+.+
T Consensus 42 ~~ylD~~~g~~~~~lGH~~p~v~~Ai~-~ql~--~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~ 118 (445)
T PRK08593 42 KTYIDLLASASSQNVGHAPPRVVEAIK-AQAD--KFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDG 118 (445)
T ss_pred CEEEECCccHHhhcCCCCCHHHHHHHH-HHHH--hccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHH
Confidence 368888533 3458886555444432 2211 1111111112456688899999998742 357777999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhcc-------cCC---cEEEEecCC----------C-------HHHHHhh
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP-------KTG---VVVKRVNTC----------D-------LDEVASA 135 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~-------~~g---~~~~~~~~~----------d-------~~~l~~~ 135 (301)
.+++ .....+|+..+..||+.......+.. ..+ ..+..++.. + ++.+++.
T Consensus 119 AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
T PRK08593 119 IIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEM 198 (445)
T ss_pred HHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHH
Confidence 4443 33356788889999997532211111 000 112222211 1 1334443
Q ss_pred c-----CCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CccccC---ccCCCCcEEEecccccc
Q 022194 136 I-----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLELGADIVMHSATKFI 202 (301)
Q Consensus 136 l-----~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~~---~~~~~~di~~~S~sK~~ 202 (301)
+ .+++.+|+++......|.+.+ +++|.++|++||+++|+||++. .|..+. ....+....+.+++|.+
T Consensus 199 ~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l 278 (445)
T PRK08593 199 FEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSL 278 (445)
T ss_pred HHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccc
Confidence 3 257889999988887888765 9999999999999999999984 322221 12234444455799999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----CCCcce
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKK 276 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~~~v~~ 276 (301)
++ |+++|++++++ .+.+.+......++...++..+++++..++.+. +..++..++.+++++.|++ ++.+..
T Consensus 279 ~~--G~p~gav~~~~-~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~ 355 (445)
T PRK08593 279 AG--GMPMSAIVGRK-EIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGD 355 (445)
T ss_pred cC--CcccEEEEEcH-HHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 64 46678888874 455544322333455667777777777776653 3445666666667776654 454444
Q ss_pred EecCCC
Q 022194 277 VNYAGL 282 (301)
Q Consensus 277 v~~p~~ 282 (301)
++..|+
T Consensus 356 vrG~Gl 361 (445)
T PRK08593 356 VRGYGL 361 (445)
T ss_pred Eeccce
Confidence 444433
No 294
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=1.5e-15 Score=130.39 Aligned_cols=252 Identities=18% Similarity=0.194 Sum_probs=177.1
Q ss_pred CccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCcc-c-cCC--CCc-hHHHHHHHHHhhcCCCceEEecchHHH
Q 022194 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYD-Y-TRS--GNP-TRDALESLLAKLDKADRALCFTSGMAA 82 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~-y-~~~--g~~-~~~~l~~~l~~~~~~~~~i~~~sG~~a 82 (301)
+-...+||++ +=+|+|++...-..+.... +..+.-... . ++. |.- ...++++..+++.|.+++++++-|-..
T Consensus 133 G~~~~~lNlg-SYNYLGFa~~~g~ca~~~~--~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~T 209 (519)
T KOG1357|consen 133 GTRSRCLNLG-SYNYLGFAQSVGPCAEASL--KSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFAT 209 (519)
T ss_pred cceeeeeeec-ccccccccccCCcCChHHH--HHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccc
Confidence 4456899999 8899998865544433211 111111111 1 111 443 378999999999999999999999766
Q ss_pred HH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-------------CceEEEEeCC
Q 022194 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-------------WTKLVWVESP 148 (301)
Q Consensus 83 i~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-------------~~~~v~i~~~ 148 (301)
.+ .+..++.||.-|+-....|.+.. .-++..|+.++....+|+.++|+.+++ +..+|+++..
T Consensus 210 Ns~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegi 285 (519)
T KOG1357|consen 210 NSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGI 285 (519)
T ss_pred cccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccc
Confidence 64 66778899876666666665553 567777888888888899888888751 2235566777
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC----------ccCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~----------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
...-|.+.++.++..++|+|..+++.||+|+.|+.+. ......|+.+++|.|++++. +|++.++ +
T Consensus 286 ysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~----GGyiags-k 360 (519)
T KOG1357|consen 286 YSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAA----GGYIAGS-K 360 (519)
T ss_pred eeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccc----cceecCc-H
Confidence 7788999999999999999999999999999776642 33345789999999999653 5777776 4
Q ss_pred hHHHHHHHhh--hhcCCCCCHHhHHHHHccccc---------HHHHHHHHHHHHHHHHHHHHhC
Q 022194 219 RLAKELYFLQ--NAEGSGLAPFDCWICLRGVKT---------MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 219 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.++... ..+...+++..+...+.+++. -.+..+++.+|.++++..+++.
T Consensus 361 ~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 361 ELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM 424 (519)
T ss_pred HHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC
Confidence 5555443322 223355666666555555443 3567788999999999988864
No 295
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.63 E-value=4.3e-16 Score=132.40 Aligned_cols=217 Identities=25% Similarity=0.265 Sum_probs=149.4
Q ss_pred CCchHHHHHHHHHhhcCCCceEEecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 53 GNPTRDALESLLAKLDKADRALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
+++...++++.+++++|.+.++++.+||.|. .++..+++|++.|++.++.|-...+. .......|.++..++..
T Consensus 27 ~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~-ga~~~~~G~~~~~l~~~~~G~ 105 (290)
T PF01212_consen 27 EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET-GAIEELSGAKLIPLPSDDDGK 105 (290)
T ss_dssp SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST-THHHHHTTCEEEEEBECTGTB
T ss_pred CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc-chhhHhcCcEEEECCCcccCC
Confidence 4567999999999999999999999999776 47777789999999988865433211 12224478888888754
Q ss_pred -CHHHHHhhcCC------CceEEEEeCCCCCc-cccc---cHHHHHHHHHHcCCEEEEeCCcCCc------cccCccCCC
Q 022194 128 -DLDEVASAIGP------WTKLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDNSIMSP------VLSRPLELG 190 (301)
Q Consensus 128 -d~~~l~~~l~~------~~~~v~i~~~~np~-G~~~---~l~~l~~l~~~~~~~li~D~~~~~~------~~~~~~~~~ 190 (301)
|++++++.+.. ++++|++++++|.. |.++ ++++|.++||++|+.++.|.+...- ........+
T Consensus 106 l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~ 185 (290)
T PF01212_consen 106 LTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAG 185 (290)
T ss_dssp B-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTT
T ss_pred CCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhh
Confidence 68888888863 58899999999964 6665 4788999999999999999995321 111222357
Q ss_pred CcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCC--CHHhHH------HHHcccccHHHHHHHHHHHHH
Q 022194 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCW------ICLRGVKTMALRVEKQQDNAQ 262 (301)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~l~~~~~~~~~~~~~~~ 262 (301)
+|.+..|++|.++.+. +++++++++.+.+. ..+....+..+ ....+. ..+..++....+..+..++++
T Consensus 186 ~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~-~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~ 261 (290)
T PF01212_consen 186 ADSVSFGGTKNGGAPG---GAVLAGNKEFIAKA-RRQRKRLGGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAK 261 (290)
T ss_dssp SSEEEEETTSTT-SSS---EEEEEESHHHHHHH-HHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHH
T ss_pred CCEEEEEEEccccccc---ceEEEechHHHHHH-HHHHHHhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999986653 57777775534333 22233333211 112222 445555655667788888899
Q ss_pred HHHHHHHhCCCc
Q 022194 263 KIAEFLASHPRV 274 (301)
Q Consensus 263 ~l~~~l~~~~~v 274 (301)
++.+.|+..+..
T Consensus 262 ~La~~l~~~~~~ 273 (290)
T PF01212_consen 262 RLAAGLEALGGV 273 (290)
T ss_dssp CHHHCHHEECEE
T ss_pred HHHHHHHHCCCc
Confidence 999999886643
No 296
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.63 E-value=1.9e-14 Score=131.68 Aligned_cols=264 Identities=14% Similarity=0.118 Sum_probs=158.9
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccC--CCCchHHHHHHHHHhhcCC---CceEEecchHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTR--SGNPTRDALESLLAKLDKA---DRALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g~~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai 83 (301)
.+++||.++ +.++|.. +|.+..+...+.+ + ..+.... ...+...++.+.|.+.+.. +.+++++||++|+
T Consensus 89 ~~ylD~~sg~~~~~lGh~-hp~v~~Av~~ql~--~-~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~ 164 (504)
T PLN02760 89 KKYLDALAGLWCTALGGS-EPRLVAAATEQLN--K-LPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN 164 (504)
T ss_pred CEEEEcCcCHHhcccCCC-CHHHHHHHHHHHh--h-ccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence 488999743 7899954 5555544323221 1 1111111 1335578899998888532 3577889999998
Q ss_pred HHHHhccC--------C-CCeEEEcCCCCccHHHHHhhhcc------cCCc---EEEEecCC----------C-------
Q 022194 84 AAVTHLLG--------T-GEEIVAGDDLYGGTDRLLSRVTP------KTGV---VVKRVNTC----------D------- 128 (301)
Q Consensus 84 ~~~~~~~~--------~-g~~Vlv~~~~y~~~~~~~~~~~~------~~g~---~~~~~~~~----------d------- 128 (301)
.+++.+.+ + .++|+..+..||+.......+.. .++. .+..++.. +
T Consensus 165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence 64444331 2 36789889999988532111111 1110 01122210 1
Q ss_pred -HHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCc-CCccccC---ccCCCCcEEE
Q 022194 129 -LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLSR---PLELGADIVM 195 (301)
Q Consensus 129 -~~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~-~~~~~~~---~~~~~~di~~ 195 (301)
.+++++.+. +++.+|+++......|.+.| +++|.++|++||+++|+||++ +.|..+. ....|....+
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDi 324 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDL 324 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcE
Confidence 134665552 46789999988887888876 999999999999999999998 4443332 2234444556
Q ss_pred ecccccccCCCCceeeEEEEcchhHHHHHHHh-------hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHH
Q 022194 196 HSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAE 266 (301)
Q Consensus 196 ~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~ 266 (301)
.+++|.++|. .+..|.+++++ .+.+.+... .+..+.+.+|..++++++.++.+. +..++..++.++|++
T Consensus 325 vtlgK~lggG-~~PigAv~~~~-~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~ 402 (504)
T PLN02760 325 VSLAKALSSA-YMPIGAVLVSP-EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQD 402 (504)
T ss_pred EEecccccCC-ccccceEeecH-HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 6799999652 12356677664 455544321 233345567888888888887764 345666667777777
Q ss_pred HHHh---CCCcceEecC
Q 022194 267 FLAS---HPRVKKVNYA 280 (301)
Q Consensus 267 ~l~~---~~~v~~v~~p 280 (301)
.|++ ++.+..++.-
T Consensus 403 ~L~~l~~~~~v~~vrG~ 419 (504)
T PLN02760 403 GIKAFSGSPIIGEIRGT 419 (504)
T ss_pred HHHHHhcCCCeeeEEeC
Confidence 7654 4444434433
No 297
>PLN02590 probable tyrosine decarboxylase
Probab=99.63 E-value=3.1e-14 Score=130.19 Aligned_cols=218 Identities=17% Similarity=0.186 Sum_probs=147.1
Q ss_pred HHHHHHHHHhhcCCCc---------eEEecchHHHH-HHHHhc----cC-------CCCeEEEcCCCCccHHHHHhhhcc
Q 022194 57 RDALESLLAKLDKADR---------ALCFTSGMAAL-AAVTHL----LG-------TGEEIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~---------~i~~~sG~~ai-~~~~~~----~~-------~g~~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
..++.+++++++|.++ .+++++||+|. .++... .+ +.-.|++++..|+++. +.+.
T Consensus 172 E~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~----KAa~ 247 (539)
T PLN02590 172 EIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFR----KACL 247 (539)
T ss_pred HHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHH----HHHH
Confidence 5667789999998763 57788888775 333221 11 2224567788888776 4445
Q ss_pred cCCc---EEEEecCC-------CHHHHHhhcCC------CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 116 KTGV---VVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 116 ~~g~---~~~~~~~~-------d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
..|+ .++.++.+ |++.|++++.+ .+.+|+.+..+..+|.+.|+++|+++|++||+|++||.+|+
T Consensus 248 ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~G 327 (539)
T PLN02590 248 IGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYA 327 (539)
T ss_pred HcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchh
Confidence 5554 34444432 78899888852 35677888888999999999999999999999999999998
Q ss_pred CccccCcc----C---CCCcEEEecccccccCCCCceeeEEEEcchh-HHHHHH----Hhhhh------------cC---
Q 022194 180 SPVLSRPL----E---LGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELY----FLQNA------------EG--- 232 (301)
Q Consensus 180 ~~~~~~~~----~---~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~-~~~~~~----~~~~~------------~~--- 232 (301)
......+. . ..+|-+..++||++..|.+ .|+++.+++. +.+.+. .+... .+
T Consensus 328 G~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l 405 (539)
T PLN02590 328 GNACICPEYRKFIDGIENADSFNMNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL 405 (539)
T ss_pred hhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC
Confidence 76643221 1 2479999999999988765 6888887653 222211 11000 00
Q ss_pred -CCCCHHhHHHHHcc--cccHHHHHHHHHHHHHHHHHHHHhCCCcceEecC
Q 022194 233 -SGLAPFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 280 (301)
Q Consensus 233 -~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p 280 (301)
........|+.++. .+-+.+.+++..+.++++.+.|++.+.++.+..|
T Consensus 406 sRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~ 456 (539)
T PLN02590 406 SRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR 456 (539)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Confidence 11122335555443 3457889999999999999999998776544433
No 298
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.63 E-value=8.1e-15 Score=139.84 Aligned_cols=207 Identities=20% Similarity=0.204 Sum_probs=145.8
Q ss_pred HHHHHHHHHhhcCCCceEEe-cchHHHHH-HHHh--c-c-----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 57 RDALESLLAKLDKADRALCF-TSGMAALA-AVTH--L-L-----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~-~sG~~ai~-~~~~--~-~-----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
..++++++++++|.+.+-+. ++|+.+-. .++. . . ...++|+++...|+... ..+...|++++.++.
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP----asa~~~G~~Vv~V~~ 607 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP----ASAAMAGMQVVPVNC 607 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH----HHHHHCCCEEEEecc
Confidence 77899999999999965454 44454432 2222 2 1 23467999999998776 446677889999886
Q ss_pred C-----CHHHHHhhcC---CCceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCCcCC--ccccCccCCCCcEEE
Q 022194 127 C-----DLDEVASAIG---PWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMS--PVLSRPLELGADIVM 195 (301)
Q Consensus 127 ~-----d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~-l~~l~~l~~~~~~~li~D~~~~~--~~~~~~~~~~~di~~ 195 (301)
+ |+++|+++++ +++++|++++|+| +|.+.+ +++|+++||++|.++++|.++.. .....+.+.|+|+++
T Consensus 608 d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~ 686 (939)
T TIGR00461 608 DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCH 686 (939)
T ss_pred CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEE
Confidence 4 8999999997 4899999999999 799977 99999999999999999999865 334567788999999
Q ss_pred eccccccc-----CCCCceeeEEEEcchhHHHHHHH--h-------------hhhcCCCCCH----HhHHHHHc--cccc
Q 022194 196 HSATKFIA-----GHSDVMAGVLAVKGERLAKELYF--L-------------QNAEGSGLAP----FDCWICLR--GVKT 249 (301)
Q Consensus 196 ~S~sK~~~-----g~~g~~~g~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~----~~~~~~~~--~l~~ 249 (301)
+|.||+|+ |++| .|++.+++. +...+.. . ...+...... ...|..+. +-+-
T Consensus 687 ~s~HKtf~~P~G~GGPg--~G~i~vr~~-L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~G 763 (939)
T TIGR00461 687 LNLHKTFCIPHGGGGPG--MGPIGVKSH-LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEG 763 (939)
T ss_pred ecCCccCCCCCCCCCCC--eEEEEEhhh-chhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHH
Confidence 99999888 4444 589988853 3222210 0 0000001111 12222222 3334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC
Q 022194 250 MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+..+....+++++.+.|++.
T Consensus 764 L~~~a~~ailnAnYl~~rL~~~ 785 (939)
T TIGR00461 764 LPKASVVAILNANYMATRLKDH 785 (939)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc
Confidence 5666778888999999999874
No 299
>PRK07046 aminotransferase; Validated
Probab=99.62 E-value=5.8e-14 Score=127.14 Aligned_cols=248 Identities=16% Similarity=0.068 Sum_probs=156.1
Q ss_pred eeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHhc
Q 022194 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL 89 (301)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~ 89 (301)
+++||.++ ..-+|..++.+..+.. .+.+ . .. .+ ....+...++.+.|.+.++.+.+.+++||++|....+++
T Consensus 76 ~yiD~~~g~g~~~lGh~~p~i~~Av~-~q~~--~-~~-~~-~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~Alrl 149 (453)
T PRK07046 76 RYDDFCLGDTGAMFGHSPAPVARALA-EQAR--R-GL-TT-MLPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRW 149 (453)
T ss_pred EEEEecccccccccCCCCHHHHHHHH-HHHH--h-CC-CC-CCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHH
Confidence 57777433 2336776665554432 2211 1 11 11 113455777888888888878899999999998644443
Q ss_pred ---cCCCCeEEEcCCCCccHHHHHhhhc---------ccCC------cEEEEecCCCHHHHHhhcC-CCceEEEEeCCCC
Q 022194 90 ---LGTGEEIVAGDDLYGGTDRLLSRVT---------PKTG------VVVKRVNTCDLDEVASAIG-PWTKLVWVESPTN 150 (301)
Q Consensus 90 ---~~~g~~Vlv~~~~y~~~~~~~~~~~---------~~~g------~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~~~n 150 (301)
...+++|+.....||+......... ...+ ..+..++..|++.+++.+. +++.+|+++....
T Consensus 150 AR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g 229 (453)
T PRK07046 150 ARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMT 229 (453)
T ss_pred HHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCC
Confidence 3346789998999999743211110 0001 1234455668999999885 5788999998877
Q ss_pred Ccccccc----HHHHHHHHHHcCCEEEEeCCcC----CccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHH
Q 022194 151 PRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (301)
Q Consensus 151 p~G~~~~----l~~l~~l~~~~~~~li~D~~~~----~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~ 222 (301)
..|.+.+ +++|.++|++||+++|+||+++ .+... ..++....+.+++|.++| |+..|+++++++ +.+
T Consensus 230 ~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~--~~~gv~PDi~t~gK~lgg--G~Pi~av~g~~~-i~~ 304 (453)
T PRK07046 230 NIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT--RAHGLEPDFLVVGKPIAG--GVPCAVYGFSAE-LAE 304 (453)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh--HHhCCCccceeehhhhcC--CCcceeeeehHH-HHH
Confidence 7777764 8999999999999999999985 22221 223444444459999975 466788888754 444
Q ss_pred HHHHh---------hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 223 ELYFL---------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 223 ~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
.+... ....+.+.++..+++.+..++.+. +..++..+..+++++.|++
T Consensus 305 ~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~ 363 (453)
T PRK07046 305 RAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRA 363 (453)
T ss_pred HHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 43311 111234457777777777776552 3456666666677776653
No 300
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.62 E-value=2.9e-15 Score=131.10 Aligned_cols=263 Identities=19% Similarity=0.149 Sum_probs=160.5
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccc-cCCCCchHHHHHHHHHhhc--CCCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDY-TRSGNPTRDALESLLAKLD--KADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y-~~~g~~~~~~l~~~l~~~~--~~~~~i~~~sG~~ai~~ 85 (301)
.+++||.+. +.-+|..++++..+..-.... ..+.. .....+...++.+.|.+.+ +.+.+.+.+||++|+..
T Consensus 16 ~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~----~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~ 91 (339)
T PF00202_consen 16 REYLDFMSGYGSVNLGHNHPEIAEAIAEQANK----LNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEA 91 (339)
T ss_dssp EEEEESSHHHHTTTT-BT-HHHHHHHHHHHHH----CSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHH
T ss_pred CEEEECCCCccceecCCCccccchhHHHHhhh----cccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHH
Confidence 468888533 456888877766544211111 11111 2223456889999999999 45678889999999864
Q ss_pred HHhccC---------CCCeEEEcCCCCccHHHHH---------hhhcccCCcEEEEecCCCHHH----------HH----
Q 022194 86 VTHLLG---------TGEEIVAGDDLYGGTDRLL---------SRVTPKTGVVVKRVNTCDLDE----------VA---- 133 (301)
Q Consensus 86 ~~~~~~---------~g~~Vlv~~~~y~~~~~~~---------~~~~~~~g~~~~~~~~~d~~~----------l~---- 133 (301)
++.+.+ ...+|+....+||+..... ..........+..++..+... ++
T Consensus 92 Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 171 (339)
T PF00202_consen 92 ALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIA 171 (339)
T ss_dssp HHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHH
Confidence 443322 4578999999999854321 111222223445666665544 22
Q ss_pred hhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCC--CCcEEEeccccccc
Q 022194 134 SAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLEL--GADIVMHSATKFIA 203 (301)
Q Consensus 134 ~~l~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~--~~di~~~S~sK~~~ 203 (301)
+.-.+++.+|+++......|...+ +++|.++|++||+++|+||+++.. -.+ ..... ..|+++ ++|.++
T Consensus 172 ~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~--~gK~l~ 249 (339)
T PF00202_consen 172 ALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVT--FGKGLG 249 (339)
T ss_dssp HHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEE--EEGGGG
T ss_pred hhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccc--cccchh
Confidence 222467899999988877776643 899999999999999999998743 222 11222 356666 679997
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHHh----CCCcceE
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKV 277 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~----~~~v~~v 277 (301)
+. +..+.++.++ .+.+........++..-++..+.++.+.++.+.+ ..++..+..+++.+.|++ ++.+..+
T Consensus 250 gG--~p~sav~~~~-~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~v 326 (339)
T PF00202_consen 250 GG--LPISAVLGSE-EIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIGEV 326 (339)
T ss_dssp TT--SSEEEEEEEH-HHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred hh--hhcccccccc-hhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 63 6678888775 4444333333445566678888888777776543 345555555566665553 3666666
Q ss_pred ecCCC
Q 022194 278 NYAGL 282 (301)
Q Consensus 278 ~~p~~ 282 (301)
+.-|+
T Consensus 327 rg~Gl 331 (339)
T PF00202_consen 327 RGIGL 331 (339)
T ss_dssp EEETT
T ss_pred eeeCe
Confidence 65543
No 301
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.61 E-value=8.2e-14 Score=125.75 Aligned_cols=251 Identities=15% Similarity=0.139 Sum_probs=160.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
..+|||.++ +.-+|..++.+..+.. .+.+ .... + ...++...++.+.|.+.. +.+.+.+++||++|+.+.+
T Consensus 53 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~~~~--~-~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~Al 126 (428)
T PRK12389 53 NKYIDYLAAYGPIITGHAHPHITKAIT-EAAE--NGVL--Y-GTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTI 126 (428)
T ss_pred CEEEEccccccccccCCCCHHHHHHHH-HHHH--hCCc--c-CCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHH
Confidence 467887433 3347877776655432 2211 1111 1 124566788888888776 4567888999999986444
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHhhhcc----------cCC------cEEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLSRVTP----------KTG------VVVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~----------~~g------~~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
.+ .....+|+.....||+.......... ..+ -.+..++..|.+.+++.+. +++.+|++
T Consensus 127 klAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~ 206 (428)
T PRK12389 127 RVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLV 206 (428)
T ss_pred HHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEE
Confidence 43 33457899889999997533211110 011 1344555568888888875 46889999
Q ss_pred eCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcccc---CccCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 146 ESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 146 ~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
+......|.+.| +++|.++|++||+++|+||++...-.. .....|....+.+++|.++| |+..|.+++++
T Consensus 207 EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~gK~lgg--G~Pi~av~~~~- 283 (428)
T PRK12389 207 EPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTALGKIIGG--GLPIGAYGGRK- 283 (428)
T ss_pred eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeeeechhhcC--CCceeEEeEHH-
Confidence 988888888876 999999999999999999998743111 11123444444579999965 35567777764
Q ss_pred hHHHHHHH---hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 219 RLAKELYF---LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 219 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
.+.+.+.. .....+...+|..+++++..++.+. +..++..++.+++++.|++
T Consensus 284 ~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 284 DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILE 340 (428)
T ss_pred HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 45554421 1122345567888888877777653 3556677777777777764
No 302
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=3.5e-14 Score=128.67 Aligned_cols=254 Identities=16% Similarity=0.174 Sum_probs=151.0
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC---CceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai~~ 85 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ +...+.+.....+...++.+.|.+.+.. +.+++++||++|+.+
T Consensus 56 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~ 132 (443)
T PRK06058 56 NRLIDLGSGIAVTSVGNSAPRVVEAVR-EQVA--RFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVEN 132 (443)
T ss_pred CEEEEcCcchhhhccCCCCHHHHHHHH-HHHH--hccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHH
Confidence 478888633 3458877766665532 2211 1111122112345578899999888742 467889999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhcc-----cCC-----cEEEEec----CCC---------------HHHHH
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP-----KTG-----VVVKRVN----TCD---------------LDEVA 133 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~-----~~g-----~~~~~~~----~~d---------------~~~l~ 133 (301)
.+.+ ...+++|+...++||+.......+.. ..+ -.+..++ ..+ .+.++
T Consensus 133 AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (443)
T PRK06058 133 AVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIE 212 (443)
T ss_pred HHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHH
Confidence 4442 33457899999999998643211111 000 0111111 111 22344
Q ss_pred hhcC-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcc-cc---CccCCCCcEEEecccccccC
Q 022194 134 SAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPV-LS---RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 134 ~~l~-~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~-~~---~~~~~~~di~~~S~sK~~~g 204 (301)
+.+. +++.+|+++......|.+.+ +++|.++|++||+++|.||++.... .. .....+....+.+++|.+++
T Consensus 213 ~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~ 292 (443)
T PRK06058 213 KQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAG 292 (443)
T ss_pred HhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccC
Confidence 4443 57888888866655566643 9999999999999999999986321 11 11223333333447899963
Q ss_pred CCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
|++.|++++++ .+.+.+.......+.+.++..++++++.++.+. +..++..+..+++.+.|++
T Consensus 293 --G~Pi~av~~~~-~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~ 357 (443)
T PRK06058 293 --GLPLSAVTGRA-EIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRA 357 (443)
T ss_pred --CCccEEEEEcH-HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 57788888875 454544333334455667888888877777653 2345555556666666654
No 303
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.61 E-value=1.7e-14 Score=127.30 Aligned_cols=220 Identities=21% Similarity=0.246 Sum_probs=146.0
Q ss_pred HHHHHHHHHhhcCCC---------ceEEecchHHHH-HHHHhc----c----CCC-----C-eEEEcCCCCccHHHHHhh
Q 022194 57 RDALESLLAKLDKAD---------RALCFTSGMAAL-AAVTHL----L----GTG-----E-EIVAGDDLYGGTDRLLSR 112 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---------~~i~~~sG~~ai-~~~~~~----~----~~g-----~-~Vlv~~~~y~~~~~~~~~ 112 (301)
..++.+++++++|.+ ..+++++||+++ .++... . ..| + .|++++-.|++.. +
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~----K 156 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIE----K 156 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHH----H
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHH----H
Confidence 455668888888876 367888888776 343322 1 011 2 4677777888775 7
Q ss_pred hcccCCcEEEEecCC-----CHHHHHhhcC----C--CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 113 VTPKTGVVVKRVNTC-----DLDEVASAIG----P--WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 113 ~~~~~g~~~~~~~~~-----d~~~l~~~l~----~--~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
.+...|+.++.++.+ |.+++++++. + .+-+|+.+..++.+|.+.|+++|+++|+++++|+++|.+|+..
T Consensus 157 aa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~ 236 (373)
T PF00282_consen 157 AARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGS 236 (373)
T ss_dssp HHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGG
T ss_pred hcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccc
Confidence 777888888888865 6788887765 2 2446777888899999999999999999999999999999874
Q ss_pred cccCc----cC---CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHH-----Hhhh----------h--cCCCC--
Q 022194 182 VLSRP----LE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-----FLQN----------A--EGSGL-- 235 (301)
Q Consensus 182 ~~~~~----~~---~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~-----~~~~----------~--~~~~~-- 235 (301)
.+..+ .. ..+|-+..++||+++.|.+ .|+++.+++....... .+.+ . .+...
T Consensus 237 ~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~--~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR 314 (373)
T PF00282_consen 237 ALLSPEYRHLLFGIERADSITIDPHKWLGVPYG--CGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR 314 (373)
T ss_dssp GGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG
T ss_pred ccccccccccccccccccccccchhhhhcCCcc--ceeEEeecccchHHHhccChhhhcccccccccccccccccccccc
Confidence 43211 11 2479999999999987765 6888888876543211 0110 0 00011
Q ss_pred --CHHhHHHHHc--ccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCC
Q 022194 236 --APFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 282 (301)
Q Consensus 236 --~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~ 282 (301)
.....|..++ +.+.+.+++++..+.++++.+.|++.+.++.+..|.+
T Consensus 315 ~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~ 365 (373)
T PF00282_consen 315 RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDL 365 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSS
T ss_pred cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCc
Confidence 1123444443 3455788999999999999999999998766555543
No 304
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.60 E-value=7.3e-14 Score=130.13 Aligned_cols=207 Identities=12% Similarity=0.086 Sum_probs=143.1
Q ss_pred HHHHHHHHHhhcCCCceEEecchH-HHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------
Q 022194 57 RDALESLLAKLDKADRALCFTSGM-AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~-~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------- 127 (301)
..+.++.+++.||+++..++++|| .++ .++++.+++||.|++.+++|.+.. ..+...|+..+++.+.
T Consensus 197 i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~----~aLilsga~PVYl~P~~n~~Gi~ 272 (713)
T PRK15399 197 HLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA----HLLMMSDVVPIWLKPTRNALGIL 272 (713)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeeEEecccccccCCc
Confidence 788999999999999999999996 556 578889999999999999998886 4556778888888753
Q ss_pred ---C-----HHHHHhhcCC-----CceEEEEeCCCCCccccccHHHHHHHHHHcCCEE-EEeCCcCCccc-----c--Cc
Q 022194 128 ---D-----LDEVASAIGP-----WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL-LVDNSIMSPVL-----S--RP 186 (301)
Q Consensus 128 ---d-----~~~l~~~l~~-----~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~l-i~D~~~~~~~~-----~--~~ 186 (301)
+ .+.+++++.+ +++++++++|++ .|.+.++++|+++| |+.+ ++||+|+.... . .+
T Consensus 273 g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sa 348 (713)
T PRK15399 273 GGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSG 348 (713)
T ss_pred CCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcCh
Confidence 3 3888888863 236899999977 89999999999999 6666 69999974321 1 11
Q ss_pred cCC--CCcEE---EecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHc----ccc--cHHHHHH
Q 022194 187 LEL--GADIV---MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR----GVK--TMALRVE 255 (301)
Q Consensus 187 ~~~--~~di~---~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~--~~~~~~~ 255 (301)
... ++|.+ +.|.||.+.+.. +++++..+...-.+++........++.+.....+.+. -++ .=.+..+
T Consensus 349 m~~~~~aD~~i~~tQStHKtL~alT--QaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~ 426 (713)
T PRK15399 349 MSGERVPGKVIFETQSTHKMLAAFS--QASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLIN 426 (713)
T ss_pred hhCCCCCCeeeeeeeehhccccccc--hheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 112 46766 999999997765 5788888654222333333333333333322222111 111 1123446
Q ss_pred HHHHHHHHHHHHHHhCCC
Q 022194 256 KQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~ 273 (301)
+..+.+..+++.+.+...
T Consensus 427 ~~i~~a~~fR~~l~~~~~ 444 (713)
T PRK15399 427 RSVERALHFRKEVQRLRE 444 (713)
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 667777778888776543
No 305
>PRK06541 hypothetical protein; Provisional
Probab=99.60 E-value=4.2e-14 Score=128.36 Aligned_cols=253 Identities=18% Similarity=0.147 Sum_probs=154.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ +........+.++...++.+.|.+... .+.+.+++||++|+.+.
T Consensus 52 ~~ylD~~~g~~~~~lGh~~p~v~~Av~-~q~~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~A 128 (460)
T PRK06541 52 KRYLDGLAGLFVVQVGHGRAELAEAAA-KQAG--TLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESA 128 (460)
T ss_pred CEEEECCccHHhccCCCCCHHHHHHHH-HHHh--hCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHH
Confidence 478888633 3448888766655532 2211 111111112345667888888988764 35788889999998644
Q ss_pred HhccC---------CCCeEEEcCCCCccHHHHHhhhccc------CC---cEEEEecC----------CC--------HH
Q 022194 87 THLLG---------TGEEIVAGDDLYGGTDRLLSRVTPK------TG---VVVKRVNT----------CD--------LD 130 (301)
Q Consensus 87 ~~~~~---------~g~~Vlv~~~~y~~~~~~~~~~~~~------~g---~~~~~~~~----------~d--------~~ 130 (301)
+.+.+ ...+|+.....||+........... .+ ..+..++. ++ ++
T Consensus 129 lklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (460)
T PRK06541 129 WKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAAD 208 (460)
T ss_pred HHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHH
Confidence 33311 2468999899999886432111100 00 01111211 11 25
Q ss_pred HHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCc-CCccccC---ccCCC--CcEEEe
Q 022194 131 EVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLSR---PLELG--ADIVMH 196 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~-~~~~~~~---~~~~~--~di~~~ 196 (301)
.+++.+. +++.+|+++...++.|.+.+ +++|.++|++||+++|+||++ +.|.... ....+ .|++
T Consensus 209 ~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDiv-- 286 (460)
T PRK06541 209 RIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDII-- 286 (460)
T ss_pred HHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEE--
Confidence 6676664 45778888887888999877 999999999999999999998 4443322 11233 4555
Q ss_pred cccccccCCCCc-eeeEEEEcchhHHHHHHHh----hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDV-MAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 197 S~sK~~~g~~g~-~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~ 269 (301)
+++|.+++ |. ..|+++++++. .+.+... ....+...++..++++++.++.+. ...++..++.+++.+.|+
T Consensus 287 t~gK~l~~--G~~pigav~~~~~i-~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~ 363 (460)
T PRK06541 287 TCAKGITS--GYSPLGAMIASDRL-FEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLE 363 (460)
T ss_pred EecccccC--CccceeEEEEcHHH-HHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 59999964 33 46777777544 3433211 122344557777777777777652 345677777788888886
Q ss_pred hC
Q 022194 270 SH 271 (301)
Q Consensus 270 ~~ 271 (301)
++
T Consensus 364 ~l 365 (460)
T PRK06541 364 KL 365 (460)
T ss_pred Hh
Confidence 64
No 306
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.60 E-value=4.3e-14 Score=126.92 Aligned_cols=252 Identities=13% Similarity=0.075 Sum_probs=146.5
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcccc-CCCCchHHHHHHHHHhhc--C--CC-ceEEe-cchHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLD--K--AD-RALCF-TSGMA 81 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~--~--~~-~~i~~-~sG~~ 81 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ + ..+... ...++...++.+.|.+.. . .. ...++ +||++
T Consensus 35 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~ql~--~-~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 110 (412)
T TIGR02407 35 KEYIDFFAGAGALNYGHNNPKLKQALI-DYLA--D-DGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN 110 (412)
T ss_pred CEEEEcccchhhccCCCCCHHHHHHHH-HHHh--h-ccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence 478888533 2347887777665532 2211 1 111111 123455778888888864 1 22 34454 79999
Q ss_pred HHHHHHhc---cCCCCeEEEcCCCCccHHHHHhhhc------ccCC---cEEEEecC--------CCHHHHHhhcC----
Q 022194 82 ALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVT------PKTG---VVVKRVNT--------CDLDEVASAIG---- 137 (301)
Q Consensus 82 ai~~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~------~~~g---~~~~~~~~--------~d~~~l~~~l~---- 137 (301)
|+.+.+.+ ...+.+|+.....||+......... ...+ ..+..++. ++++.+++.+.
T Consensus 111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 190 (412)
T TIGR02407 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS 190 (412)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence 98644443 3345689999999999864432211 1111 12333443 23666777775
Q ss_pred --CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-Ccc---ccCccCCCCcEEEecccccccCCCC
Q 022194 138 --PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPV---LSRPLELGADIVMHSATKFIAGHSD 207 (301)
Q Consensus 138 --~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~---~~~~~~~~~di~~~S~sK~~~g~~g 207 (301)
+++.+|+++...++.|.+.+ +++|.++|++||+++|+||+++ .|. .......+.+..+.+++|+++ +.|
T Consensus 191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg-~~G 269 (412)
T TIGR02407 191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSIS-GYG 269 (412)
T ss_pred CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhcc-CCc
Confidence 35789999988888888642 8999999999999999999986 222 111122333333445889994 435
Q ss_pred ceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc-H--HHHHHHHHHHHHHHHHHHH
Q 022194 208 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-M--ALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 208 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~l~~~l~ 269 (301)
++.|+++.+++ + ..+.......+.+.++..+.++...++. + .+..++..+..+++++.|+
T Consensus 270 ~pigav~~~~~-~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~ 332 (412)
T TIGR02407 270 LPLALTLIKPE-L-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLD 332 (412)
T ss_pred cceeEEEEchh-h-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 78899998754 3 3222222333344556655555555553 2 2233444455555555554
No 307
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.60 E-value=3.4e-14 Score=128.87 Aligned_cols=250 Identities=14% Similarity=0.135 Sum_probs=155.0
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ ... .+. ...+...++.+.|.+.. +.+.+.+++||++|+...+
T Consensus 99 ~~yiD~~~g~g~~~lGh~~p~v~~av~-~ql~--~~~--~~~-~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~Al 172 (474)
T PLN02482 99 NEYIDYVGSWGPAIIGHADDEVLAALA-ETMK--KGT--SFG-APCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVL 172 (474)
T ss_pred CEEEEecccccccccCCCCHHHHHHHH-HHHh--hCC--CCC-CCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHH
Confidence 467887533 2337877666554432 2211 111 111 12344677888888776 4567888999999986544
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHhhh----------cccCCc------EEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLSRV----------TPKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~~~----------~~~~g~------~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
++ ...+++|+.....||+....+... ....++ .+..++.+|++.+++.+. +++.+|++
T Consensus 173 klAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~ 252 (474)
T PLN02482 173 RLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVIL 252 (474)
T ss_pred HHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEE
Confidence 43 334578898899999975321100 001111 234455568888888875 46889999
Q ss_pred eCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcccc----CccCCCCcEEEecccccccCCCCceeeEEEEcc
Q 022194 146 ESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (301)
Q Consensus 146 ~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~ 217 (301)
+......|.+.| +++|.++|++||+++|+||++. |... ....+|....+.+++|.++| |+..|.+++++
T Consensus 253 Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~~ga~~~~gv~PDi~t~gK~lgg--G~Pigav~g~~ 329 (474)
T PLN02482 253 EPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAYGGAQEYFGITPDLTTLGKVIGG--GLPVGAYGGRR 329 (474)
T ss_pred CCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCcchHhHHhCCCCCEEEecchhhC--CCceEEEEEcH
Confidence 988887888765 7789999999999999999985 3221 11123444445678999964 35567777664
Q ss_pred hhHHHHHHHhh---hhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 218 ERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 218 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
++++.+.... ...+...++..+++.+..++.+. +..++..++.+++++.|++
T Consensus 330 -ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~ 386 (474)
T PLN02482 330 -EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILE 386 (474)
T ss_pred -HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 5555443211 12223346666777766666553 3556777777777777764
No 308
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.59 E-value=3.7e-14 Score=125.22 Aligned_cols=209 Identities=11% Similarity=0.062 Sum_probs=133.4
Q ss_pred hHHHHHHHHHhhcCCC---ceEEe-cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHH
Q 022194 56 TRDALESLLAKLDKAD---RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD 130 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~---~~i~~-~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~ 130 (301)
..++.++.++++++.+ +++++ +|||.++. ++..++.+ +.+++....|..-...+.......+ ++..++.+.-+
T Consensus 42 ~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~ 119 (361)
T TIGR01366 42 LVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGS 119 (361)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCC
Confidence 3788899999999973 34554 44788886 55566643 3444545555444333223222223 44555433233
Q ss_pred HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCcee
Q 022194 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA 210 (301)
Q Consensus 131 ~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~ 210 (301)
.++..+.+++++|.+++..|.||...|+++| +|++|+++++|.+.+.+...-..+. +|++++|.+|++++|+| .
T Consensus 120 ~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~-~D~~~~s~~K~lg~~~G--l 193 (361)
T TIGR01366 120 APEPQADPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE-TDVYYFAPQKNFASDGG--L 193 (361)
T ss_pred CCCCccCCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHHH-CCEEEEEchhhcCCCCc--e
Confidence 4444566789999999999999999999988 5899999999999999887644443 89999999999977766 4
Q ss_pred eEEEEcchhHHHHHHHh-------------h----h----hcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHH
Q 022194 211 GVLAVKGERLAKELYFL-------------Q----N----AEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQK 263 (301)
Q Consensus 211 g~~~~~~~~~~~~~~~~-------------~----~----~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~ 263 (301)
++++.+++.+ +++... . . ...++.+....+.+.++++. ++.+.++..+.+++
T Consensus 194 ~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~ 272 (361)
T TIGR01366 194 WLAIMSPAAL-ERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSR 272 (361)
T ss_pred EEEEECHHHH-hhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 6666665544 222210 0 0 11233333333333344433 34445677777888
Q ss_pred HHHHHHhCCC
Q 022194 264 IAEFLASHPR 273 (301)
Q Consensus 264 l~~~l~~~~~ 273 (301)
+.+.+++.+.
T Consensus 273 l~~~l~~~~~ 282 (361)
T TIGR01366 273 LYSWAQERPY 282 (361)
T ss_pred HHHHHHhCCC
Confidence 8888887664
No 309
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.59 E-value=4.3e-14 Score=127.88 Aligned_cols=265 Identities=15% Similarity=0.138 Sum_probs=155.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ +........+.++...++.+.|.+.+. .+.+.+++||++|+.+.
T Consensus 49 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~ql~--~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~A 125 (445)
T PRK09221 49 RKILDGTAGLWCCNAGHGRPEIVEAVA-RQAA--TLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTA 125 (445)
T ss_pred CEEEEccccHhhccCCCCCHHHHHHHH-HHHH--hccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHH
Confidence 367887533 2347876666555432 2211 111111111245667788889988873 45788899999998644
Q ss_pred HhccC---------CCCeEEEcCCCCccHHHHHhhhc---------ccCCcEEEEecCC------------------CHH
Q 022194 87 THLLG---------TGEEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTC------------------DLD 130 (301)
Q Consensus 87 ~~~~~---------~g~~Vlv~~~~y~~~~~~~~~~~---------~~~g~~~~~~~~~------------------d~~ 130 (301)
+.+.+ ...+|+.....||+.....-... ......+..++.. ..+
T Consensus 126 lklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
T PRK09221 126 LKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELAD 205 (445)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHH
Confidence 33211 23579988999998742211110 0000111122211 124
Q ss_pred HHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CccccC---ccCCCCcEEEecc
Q 022194 131 EVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLELGADIVMHSA 198 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~~---~~~~~~di~~~S~ 198 (301)
++++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||+++ .|..+. ....+.+..+.++
T Consensus 206 ~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~ 285 (445)
T PRK09221 206 DLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITF 285 (445)
T ss_pred HHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEe
Confidence 5666553 56889999988888888877 9999999999999999999984 332221 1223443334569
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHH
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~ 269 (301)
+|.+++. .+..|.+++++ .+.+.+.. ..+.++.+.++..+++++..++.+. ...++..+..+++++.|+
T Consensus 286 gK~l~gG-~~Pi~av~~~~-~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~ 363 (445)
T PRK09221 286 AKGLTNG-AIPMGAVIASD-EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVH 363 (445)
T ss_pred ccccccC-cccceeeEEcH-HHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 9999642 23356676664 44443321 1122345567777777777777653 345667777777777776
Q ss_pred hC---CCcceEecC
Q 022194 270 SH---PRVKKVNYA 280 (301)
Q Consensus 270 ~~---~~v~~v~~p 280 (301)
++ +.+..++..
T Consensus 364 ~l~~~~~v~~vrg~ 377 (445)
T PRK09221 364 SLKGLPHVIDIRNI 377 (445)
T ss_pred hhccCCCEEEEecC
Confidence 54 444444433
No 310
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=5.3e-14 Score=127.70 Aligned_cols=263 Identities=19% Similarity=0.184 Sum_probs=155.9
Q ss_pred ceeeecCCCCCC--CCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHHH
Q 022194 11 TLLMNFSNEFDP--YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~--~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~ 86 (301)
.++|||. ++.+ +|..++. +..+...+.+ . ..+....+.++...++.+.|++++.. +.+.+.+||++|+.++
T Consensus 72 ~~ylD~~-g~~~~~lGh~~p~-v~~Ai~~ql~--~-~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~A 146 (459)
T PRK06082 72 KKYMDFH-GNNVHQLGYGHPH-VIEKVKEQMA--K-LPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMA 146 (459)
T ss_pred CEEEEcc-cHhhcccCCCCHH-HHHHHHHHHH--h-CCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHH
Confidence 4789987 4455 7875544 4443322221 1 11222233556688999999998853 4677889999998655
Q ss_pred Hhcc---CCCCeEEEcCCCCccHHHHHhhhccc------CC---cEEEEec--------CCC--------HHHHHhhcC-
Q 022194 87 THLL---GTGEEIVAGDDLYGGTDRLLSRVTPK------TG---VVVKRVN--------TCD--------LDEVASAIG- 137 (301)
Q Consensus 87 ~~~~---~~g~~Vlv~~~~y~~~~~~~~~~~~~------~g---~~~~~~~--------~~d--------~~~l~~~l~- 137 (301)
+.+. ..+.+|+.....||+.....-.+... ++ -.+..++ ..+ ++.+++.+.
T Consensus 147 lklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 226 (459)
T PRK06082 147 LKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK 226 (459)
T ss_pred HHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc
Confidence 5543 34578888888898875221111100 00 0111222 111 245666664
Q ss_pred -CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCC--CcEEEecccccccCCCC
Q 022194 138 -PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELG--ADIVMHSATKFIAGHSD 207 (301)
Q Consensus 138 -~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~--~di~~~S~sK~~~g~~g 207 (301)
+++.+|+++...+..+...| +++|.++|++||+++|+||+++.. ..+ .....| .|+++ ++|.++| +.
T Consensus 227 ~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~g-G~ 303 (459)
T PRK06082 227 EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGG-GL 303 (459)
T ss_pred CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEE--ecccccC-CC
Confidence 46788999887765333444 899999999999999999997632 222 112234 46555 9999965 22
Q ss_pred ceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----CCCcceEecCC
Q 022194 208 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAG 281 (301)
Q Consensus 208 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~~~v~~v~~p~ 281 (301)
+..|.++.+++ +..........++...++..++++++.++.+. +..++..++.+++.+.|++ ++.+..++..|
T Consensus 304 ~P~~av~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 382 (459)
T PRK06082 304 VPIAAMITKDK-YNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIG 382 (459)
T ss_pred CcceEEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeecc
Confidence 34677777644 43322111111345567888888777777653 3456666777777777754 45555555554
Q ss_pred C
Q 022194 282 L 282 (301)
Q Consensus 282 ~ 282 (301)
+
T Consensus 383 l 383 (459)
T PRK06082 383 L 383 (459)
T ss_pred c
Confidence 4
No 311
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.59 E-value=7.7e-14 Score=126.36 Aligned_cols=262 Identities=17% Similarity=0.126 Sum_probs=153.8
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcccc-CCCCchHHHHHHHHHhhcCC----CceEEe-cchHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLDKA----DRALCF-TSGMAA 82 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~~~----~~~i~~-~sG~~a 82 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ ...+... .+.++...++.+.|.+++.. ...+++ +||++|
T Consensus 39 ~~ylD~~~g~~~~~lGh~~p~i~~ai~-~q~~---~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA 114 (442)
T TIGR00709 39 KEYLDFLAGAGTLALGHNHPNMKQKIL-DYLQ---SGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA 114 (442)
T ss_pred CEEEEccccHhhhcCCCCCHHHHHHHH-HHHH---hccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence 468888533 3347877666555432 2211 1111111 12456688899999988742 244454 799999
Q ss_pred HHHHHhc---cCCCCeEEEcCCCCccHHHHHhhhccc----CC-----cEEEEecCCC-------------H----HHHH
Q 022194 83 LAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPK----TG-----VVVKRVNTCD-------------L----DEVA 133 (301)
Q Consensus 83 i~~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~----~g-----~~~~~~~~~d-------------~----~~l~ 133 (301)
+.+.+++ ...+.+|+.....||+........... .+ ..+..++..+ . +.++
T Consensus 115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 8644443 334567999999999986443222210 00 1122222211 1 1123
Q ss_pred hhcC------CCceEEEEeCCCCCccccc-c---HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCC--CcEEEec
Q 022194 134 SAIG------PWTKLVWVESPTNPRQQIC-D---IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELG--ADIVMHS 197 (301)
Q Consensus 134 ~~l~------~~~~~v~i~~~~np~G~~~-~---l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~--~di~~~S 197 (301)
+.+. +++.+|+++...+..|.+. | +++|.++|++||+++|.||++... ... .....+ .|+++
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~-- 272 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV-- 272 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--
Confidence 3332 4688999998887777764 2 899999999999999999998632 222 112234 45555
Q ss_pred ccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----C
Q 022194 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----H 271 (301)
Q Consensus 198 ~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~ 271 (301)
++|.+++ |++.|+++.+++ + ..........+.+.++..+++++..++.+. +..++..++.+++.+.|++ +
T Consensus 273 ~gK~l~~--G~Pigav~~~~~-~-~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~ 348 (442)
T TIGR00709 273 MSKAVGG--GLPLAVLLIAPE-F-DAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEH 348 (442)
T ss_pred EcccccC--CcccEEEEEchH-H-hccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999965 578899988765 4 322222233445567777777777776643 3345555556666666653 5
Q ss_pred CCcceEecCCC
Q 022194 272 PRVKKVNYAGL 282 (301)
Q Consensus 272 ~~v~~v~~p~~ 282 (301)
+.+..++..|+
T Consensus 349 ~~v~~vrG~Gl 359 (442)
T TIGR00709 349 PCIGNVRGRGL 359 (442)
T ss_pred CCeeeeeccce
Confidence 55555555443
No 312
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.58 E-value=7.3e-14 Score=135.34 Aligned_cols=209 Identities=25% Similarity=0.283 Sum_probs=141.1
Q ss_pred HHHHHHHHHhhcCCCceEEecchH-HHH-HHHHhc----cCCCC----eEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 57 RDALESLLAKLDKADRALCFTSGM-AAL-AAVTHL----LGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~-~ai-~~~~~~----~~~g~----~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
..++++++++++|.+++-+..+|+ .+. ..++.+ .++|+ +|++++..|++.. ..+...|++++.++.
T Consensus 544 i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp----~sa~~~G~~vv~v~~ 619 (954)
T PRK05367 544 IDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNP----ASAVMAGMKVVVVAC 619 (954)
T ss_pred HHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhH----HHHHHCCCEEEEECC
Confidence 678889999999999877776554 443 222222 24554 6999999998886 345667899999886
Q ss_pred C-----CHHHHHhhcCC---CceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCc--cccCccCCCCcEEE
Q 022194 127 C-----DLDEVASAIGP---WTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSP--VLSRPLELGADIVM 195 (301)
Q Consensus 127 ~-----d~~~l~~~l~~---~~~~v~i~~~~np~G~~-~~l~~l~~l~~~~~~~li~D~~~~~~--~~~~~~~~~~di~~ 195 (301)
+ |++++++++.+ ++.+|++++|++. |.+ .|+++|+++||++|+++++|.++..+ .+..+.+.|+|+++
T Consensus 620 d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~ 698 (954)
T PRK05367 620 DENGNIDLDDLRAKAEEHADNLAAIMITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSH 698 (954)
T ss_pred CCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEE
Confidence 4 78999998864 5788888998885 554 78999999999999999999999744 23456678999999
Q ss_pred ecccccccCCCCc---eeeEEEEcchhHHHHHHHhh-----h--hcCCCC-CHH-h------HHH--HHcccccHHHHHH
Q 022194 196 HSATKFIAGHSDV---MAGVLAVKGERLAKELYFLQ-----N--AEGSGL-APF-D------CWI--CLRGVKTMALRVE 255 (301)
Q Consensus 196 ~S~sK~~~g~~g~---~~g~~~~~~~~~~~~~~~~~-----~--~~~~~~-~~~-~------~~~--~~~~l~~~~~~~~ 255 (301)
.|+||+|+.|-|. -.|++.+++ .+...+.... . ..+... ++. + ++. ...+.+-+.+..+
T Consensus 699 ~s~HK~f~~P~G~GGPg~G~l~vr~-~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~ 777 (954)
T PRK05367 699 LNLHKTFCIPHGGGGPGVGPIGVKA-HLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATE 777 (954)
T ss_pred ecCcccCCCCcCCCCCceEEEeecc-cccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 9999998644321 147777763 3322211110 0 001111 111 0 111 1223334566667
Q ss_pred HHHHHHHHHHHHHHhC
Q 022194 256 KQQDNAQKIAEFLASH 271 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~ 271 (301)
....+++++.+.|++.
T Consensus 778 ~~~~~A~Yl~~~L~~~ 793 (954)
T PRK05367 778 VAILNANYIAKRLKDH 793 (954)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7778899999999775
No 313
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.58 E-value=5.3e-14 Score=126.92 Aligned_cols=253 Identities=15% Similarity=0.070 Sum_probs=145.5
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcccc-CCCCchHHHHHHHHHhhc----CCC-ceEEe-cchHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLD----KAD-RALCF-TSGMA 81 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~----~~~-~~i~~-~sG~~ 81 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ . ..+... ...++...++.+.|.+.+ +.+ ...++ +||++
T Consensus 39 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~ql~--~-~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 114 (425)
T PRK09264 39 KEYIDFFAGAGALNYGHNNPVLKQALI-DYLQ--R-DGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN 114 (425)
T ss_pred CEeeecccchhhccCCCCCHHHHHHHH-HHHH--h-cccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence 468888533 2348887666554432 2211 1 111111 123455778888888764 233 34454 69999
Q ss_pred HHHHHHhc---cCCCCeEEEcCCCCccHHHHHhhhc------ccCC---cEEEEecC--------CCHHHHHhhcC----
Q 022194 82 ALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVT------PKTG---VVVKRVNT--------CDLDEVASAIG---- 137 (301)
Q Consensus 82 ai~~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~------~~~g---~~~~~~~~--------~d~~~l~~~l~---- 137 (301)
|+.+.+.+ .....+|+.....||+.....-... ...+ ..+..++. +|++++++.+.
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 98644443 3345678988999999753321110 0111 12333443 36677787774
Q ss_pred --CCceEEEEeCCCCCccccc----cHHHHHHHHHHcCCEEEEeCCcCCc----cccCccCCCCcEEEecccccccCCCC
Q 022194 138 --PWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMSP----VLSRPLELGADIVMHSATKFIAGHSD 207 (301)
Q Consensus 138 --~~~~~v~i~~~~np~G~~~----~l~~l~~l~~~~~~~li~D~~~~~~----~~~~~~~~~~di~~~S~sK~~~g~~g 207 (301)
+++.+|+++......|... .+++|.++|++||+++|+||+++.. ........+.+..+.+++|.++ ++|
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~-~~G 273 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSIS-GYG 273 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccC-CCc
Confidence 2578899998887777654 3999999999999999999998632 1111112233333456889994 446
Q ss_pred ceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc-cH--HHHHHHHHHHHHHHHHHHHh
Q 022194 208 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-TM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 208 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
++.|+++++++ + ..+.......+...++....+.+..++ .+ .+..++..++.+++++.|++
T Consensus 274 ~pigav~~~~~-i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 274 LPMALVLIKPE-L-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEE 337 (425)
T ss_pred cceEEEEEchh-h-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 78899988754 3 222211222233445555555555552 22 13445556666666666654
No 314
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.58 E-value=4.2e-14 Score=131.71 Aligned_cols=208 Identities=13% Similarity=0.075 Sum_probs=144.1
Q ss_pred HHHHHHHHHhhcCCCceEEecchH-HHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------
Q 022194 57 RDALESLLAKLDKADRALCFTSGM-AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~-~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------- 127 (301)
..+.++.+++.||+++..++++|| .++ .++++++++||.|++.+++|-+.. ..+...|+..+++.+.
T Consensus 197 i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~----haLilsga~PVYl~P~rn~~Gi~ 272 (714)
T PRK15400 197 HKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT----HLMMMSDVTPIYFRPTRNAYGIL 272 (714)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeEEEecccccccCCc
Confidence 788999999999999999999996 556 577889999999999999998876 4556778888887643
Q ss_pred ---C-----HHHHHhhcCC--Cce---EEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-------Ccc
Q 022194 128 ---D-----LDEVASAIGP--WTK---LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-------RPL 187 (301)
Q Consensus 128 ---d-----~~~l~~~l~~--~~~---~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-------~~~ 187 (301)
+ .+.+++++.+ +.+ .+++++|++ .|.+.++++|+++|+.++ +++||+|+..... .+.
T Consensus 273 g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam 349 (714)
T PRK15400 273 GGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGM 349 (714)
T ss_pred cCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcChh
Confidence 3 7888888863 223 789999977 899999999999999887 6999999753211 122
Q ss_pred CCCC---c--EEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHc----ccc--cHHHHHHH
Q 022194 188 ELGA---D--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR----GVK--TMALRVEK 256 (301)
Q Consensus 188 ~~~~---d--i~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~--~~~~~~~~ 256 (301)
..|+ | +++.|.||.+.+.. +++++..+...-.+++........++.+.....+.+. -++ .=.+..++
T Consensus 350 ~~ga~~~~~i~vtQStHKtL~alT--QaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~ 427 (714)
T PRK15400 350 SGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLING 427 (714)
T ss_pred hcCCCCCCceEEEEchhhcccchh--HHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 3345 4 99999999987654 4666666543212333333333333333222211111 111 11334566
Q ss_pred HHHHHHHHHHHHHhCCC
Q 022194 257 QQDNAQKIAEFLASHPR 273 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~ 273 (301)
..+.+..+++.|.+.+.
T Consensus 428 ~i~~a~~~R~~l~~~~~ 444 (714)
T PRK15400 428 SIERAIKFRKEIKRLRT 444 (714)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 77777788888877654
No 315
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.58 E-value=1.4e-13 Score=124.36 Aligned_cols=254 Identities=15% Similarity=0.149 Sum_probs=150.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcccc-CCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~ 85 (301)
..++||.++ +.-+|..++.+..+.. .+.+ + -.+... ...++...++.+.|.+++. .+.+.+++||++|+.+
T Consensus 46 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~ql~--~-l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~ 121 (442)
T PRK13360 46 RRVLDGTAGLWCVNAGHGRPEIVEAVR-AQAG--E-LDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDT 121 (442)
T ss_pred CEEEECchhHHHhccCCCCHHHHHHHH-HHHH--h-CCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 367777422 1236776666555432 1111 1 111111 1235667788888888763 4578889999999864
Q ss_pred HHhccC---------CCCeEEEcCCCCccHHHHHhhhc---------ccCCcEEEEecCC------------------CH
Q 022194 86 VTHLLG---------TGEEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTC------------------DL 129 (301)
Q Consensus 86 ~~~~~~---------~g~~Vlv~~~~y~~~~~~~~~~~---------~~~g~~~~~~~~~------------------d~ 129 (301)
.+.+.+ .+.+|+.....||+.....-.+. ......+..++.. ..
T Consensus 122 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 201 (442)
T PRK13360 122 ALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELA 201 (442)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHH
Confidence 433311 23579999999999742210000 0000111222211 13
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCc-CCccccCc---cCCCCcEEEec
Q 022194 130 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLSRP---LELGADIVMHS 197 (301)
Q Consensus 130 ~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~-~~~~~~~~---~~~~~di~~~S 197 (301)
+++++.+. +++.+|+++......|...+ +++|.++|++||+++|+||++ +.|..+.. ...+....+.+
T Consensus 202 ~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt 281 (442)
T PRK13360 202 DELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLT 281 (442)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceee
Confidence 46666664 56789999988888888877 999999999999999999998 44433322 22344344457
Q ss_pred ccccccCCCCceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHH
Q 022194 198 ATKFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 198 ~sK~~~g~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l 268 (301)
++|.+++ +.+..|.+++++ .+.+.+.. ..+.++.+.++..+++++..++.+. ...++..++.+++++.|
T Consensus 282 ~gK~l~g-G~~P~gav~~~~-~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l 359 (442)
T PRK13360 282 CAKGLTN-GAIPMGAVFVSS-EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDAL 359 (442)
T ss_pred eeecccc-CccceEEEEEcH-HHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999964 223356666664 44443321 1123345567778888777777653 34466666667777777
Q ss_pred Hh
Q 022194 269 AS 270 (301)
Q Consensus 269 ~~ 270 (301)
++
T Consensus 360 ~~ 361 (442)
T PRK13360 360 HS 361 (442)
T ss_pred HH
Confidence 64
No 316
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.58 E-value=3.1e-13 Score=115.94 Aligned_cols=252 Identities=23% Similarity=0.248 Sum_probs=180.7
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCc-------hHHHHHHHHHhhcCCC--ceEEecchHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNP-------TRDALESLLAKLDKAD--RALCFTSGMAA 82 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~-------~~~~l~~~l~~~~~~~--~~i~~~sG~~a 82 (301)
.+.+|- +..|++..-||++.+.....++ +...|.||..+ ..-+++..++++.|.+ ++-+.-.+|++
T Consensus 75 ~~~sfi-G~GyY~~~~P~vI~rnile~pe----wyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAa 149 (450)
T COG0403 75 VFTSFI-GAGYYDTYTPPVILRNILENPE----WYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAA 149 (450)
T ss_pred hhhhhc-cCcccCCcCcHHHHHHhhcCcc----ccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHH
Confidence 445555 6789999999999988877777 45567777321 2345667788999988 66677777743
Q ss_pred ---HHHHHhccCC-CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcc-cccc
Q 022194 83 ---LAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQ-QICD 157 (301)
Q Consensus 83 ---i~~~~~~~~~-g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G-~~~~ 157 (301)
+.+..+..+. .++++++...|+.+...+...++..|++++..+.+|.++++++...++.++++++|+. .| ...+
T Consensus 150 AEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~-~G~~~~d 228 (450)
T COG0403 150 AEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNT-FGIVEED 228 (450)
T ss_pred HHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCC-CCccchh
Confidence 3344445443 5899999999999999999999999999999999999999999435889999999997 67 6677
Q ss_pred HHHHHHHHHHcCCEEEEeC-CcCCccccCccCCCCcEEEecccc-----cccCCCCceeeEEEEcchhHHHH--------
Q 022194 158 IRKIAEMAHAHGALLLVDN-SIMSPVLSRPLELGADIVMHSATK-----FIAGHSDVMAGVLAVKGERLAKE-------- 223 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~-~~~~~~~~~~~~~~~di~~~S~sK-----~~~g~~g~~~g~~~~~~~~~~~~-------- 223 (301)
+++|.+.+|++|.++++=. -.+.+.+..|.++|+||++++.+. .|||| ..|++.++++..++.
T Consensus 229 ~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGP---hag~fA~~~~~~R~mPGRlVG~S 305 (450)
T COG0403 229 LRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGP---HAGYFAVKDEFKRQMPGRLVGVS 305 (450)
T ss_pred HHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCc---ceeeeeEhHhHhhcCCCceeeee
Confidence 9999999999998776643 356677888999999999999887 46555 479998876533220
Q ss_pred ------------H----HHhhh--hcCCCCCHHh-------HHHHHcccccHHHHHHHHHHHHHHHHHHHHhCC
Q 022194 224 ------------L----YFLQN--AEGSGLAPFD-------CWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 224 ------------~----~~~~~--~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
+ ..++. ...+.++..+ .++...+-+-+.+.-++..+.+.++.+.|++..
T Consensus 306 ~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~ 379 (450)
T COG0403 306 VDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIG 379 (450)
T ss_pred ecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 0 00110 1112222211 122223334456666788888999999998654
No 317
>PRK12403 putative aminotransferase; Provisional
Probab=99.58 E-value=1.4e-13 Score=125.11 Aligned_cols=264 Identities=18% Similarity=0.132 Sum_probs=152.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccC--CCCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTR--SGNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
.+++||.++ +.-+|..+ |.+..+...+.+ + ..+.... ...+...+++++|++++. .+.+++++||++|+.
T Consensus 54 ~~ylD~~~g~~~~~lGh~h-p~v~~A~~~q~~--~-~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 129 (460)
T PRK12403 54 KRYLDGMSGLWCTNLGYGR-KDLAAAAARQME--Q-LPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE 129 (460)
T ss_pred CEEEECchhHHhhcCCCCC-HHHHHHHHHHHH--h-CCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 368887432 23489855 555544322221 1 1111111 134558899999999886 457889999999986
Q ss_pred HHHhcc--------CCCC-eEEEcCCCCccHHHHHhhhccc-----CC---cEEEEecCC-----------------CHH
Q 022194 85 AVTHLL--------GTGE-EIVAGDDLYGGTDRLLSRVTPK-----TG---VVVKRVNTC-----------------DLD 130 (301)
Q Consensus 85 ~~~~~~--------~~g~-~Vlv~~~~y~~~~~~~~~~~~~-----~g---~~~~~~~~~-----------------d~~ 130 (301)
+.+.+. ++++ .|+.....||+.....-.+... .+ -.+..++.. +.+
T Consensus 130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK12403 130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL 209 (460)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 444432 2333 4556667888874321111100 00 012222211 124
Q ss_pred HHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-cccc---CccCCC--CcEEEe
Q 022194 131 EVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELG--ADIVMH 196 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~---~~~~~~--~di~~~ 196 (301)
++++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||+++. |-.+ .....| .|+++
T Consensus 210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~- 288 (460)
T PRK12403 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS- 288 (460)
T ss_pred HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEE-
Confidence 4555542 46788999988887788776 99999999999999999999853 2222 112233 46665
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHh----hhhcCCCCCHHhHHHHHcccccHHH--HHHHHH-HHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQ-DNAQKIAEFLA 269 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~-~~~~~l~~~l~ 269 (301)
++|.++|.- +..|.+++++ .+.+.+... .+..+.+.+|..++++++.++.+.+ ..++.. ++.+++++.|+
T Consensus 289 -~gK~lggG~-~Piga~v~~~-~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~ 365 (460)
T PRK12403 289 -IAKGLTSGY-VPMGGLVLSK-RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLR 365 (460)
T ss_pred -Ecccccccc-cceEEEEECH-HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 999996531 2356666664 455543211 1223455788888888888877642 345554 56666766665
Q ss_pred ----hCCCcceEecCCC
Q 022194 270 ----SHPRVKKVNYAGL 282 (301)
Q Consensus 270 ----~~~~v~~v~~p~~ 282 (301)
+++.+..++..|+
T Consensus 366 ~l~~~~~~i~~vrG~Gl 382 (460)
T PRK12403 366 EVFGDHPLVGEVQGAGL 382 (460)
T ss_pred HHHhcCCCEEeEeecce
Confidence 3555555554443
No 318
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.58 E-value=1e-13 Score=126.06 Aligned_cols=253 Identities=13% Similarity=0.102 Sum_probs=143.6
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC---CceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai~~ 85 (301)
.++|||.++ +--+|..++.+..+.. .+.+ .........+.++...++.+.|.+++.. +.+.+++||++|+.+
T Consensus 54 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~ 130 (451)
T PRK06918 54 NQYIDFAGAIGTINVGHSHPKVKEALH-KQVD--QYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVEN 130 (451)
T ss_pred CEEEEcCCchhhcCCCCCCHHHHHHHH-HHHH--hccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHH
Confidence 367888533 2347877665554432 2211 1111111112346688899999988742 467888999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhccc---C----C---cEEEEecCCC-----------------HHHHHhh
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPK---T----G---VVVKRVNTCD-----------------LDEVASA 135 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~---~----g---~~~~~~~~~d-----------------~~~l~~~ 135 (301)
.+.+ .....+|+.....||+.......+... . + -.+..++..+ .+.++..
T Consensus 131 AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (451)
T PRK06918 131 AVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNF 210 (451)
T ss_pred HHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHH
Confidence 4443 334567998899999986432221110 0 0 0112221110 1223332
Q ss_pred c----C-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccc-c---CccCCCCcEEEecccccc
Q 022194 136 I----G-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL-S---RPLELGADIVMHSATKFI 202 (301)
Q Consensus 136 l----~-~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~---~~~~~~~di~~~S~sK~~ 202 (301)
+ . +++.+|+++......|.+.+ +++|.++|++||+++|+||++..... . .....+....+.|++|.+
T Consensus 211 ~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l 290 (451)
T PRK06918 211 FISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSL 290 (451)
T ss_pred HHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhh
Confidence 2 2 46788888876655566543 89999999999999999999864322 1 112234333466899999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~ 269 (301)
+ +|++.|++++++ .+.+.+.......+...++..+.++...++.+. ...++..+..+++.+.|+
T Consensus 291 ~--~G~pig~v~~~~-~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~ 356 (451)
T PRK06918 291 G--AGVPISGVIGRK-EIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFE 356 (451)
T ss_pred c--CCCccEEEEEcH-HHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 5 468999999875 454544333333445567777777655555431 122333333444444443
No 319
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1.1e-13 Score=125.58 Aligned_cols=251 Identities=14% Similarity=0.075 Sum_probs=150.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~ 86 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ +.......-...+...++.+.|.+.... +.+.+++||++|+.+.
T Consensus 53 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~-~ql~--~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~A 129 (457)
T PRK05639 53 NVFIDFLAGAAAASTGYSHPKLVKAVQ-EQVA--LIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMA 129 (457)
T ss_pred CEEEECCcCHHhhccCCCCHHHHHHHH-HHHH--hccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHH
Confidence 478888633 3458887777655432 2211 1111111111235577899999888743 4688889999998644
Q ss_pred Hhc---cCCCCeEEEcCCCCccHHHHHhhhcc-----cCC-----cEEEEecCC-------------CH--------HHH
Q 022194 87 THL---LGTGEEIVAGDDLYGGTDRLLSRVTP-----KTG-----VVVKRVNTC-------------DL--------DEV 132 (301)
Q Consensus 87 ~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~-----~~g-----~~~~~~~~~-------------d~--------~~l 132 (301)
+.+ ...+.+|+.....||+.......+.. ..+ -.+..++.. +. +.+
T Consensus 130 lklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (457)
T PRK05639 130 IKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYL 209 (457)
T ss_pred HHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHH
Confidence 443 33456788889999997543211111 011 012233321 12 234
Q ss_pred Hhhc------CCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccC---ccCCC--CcEEEe
Q 022194 133 ASAI------GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSR---PLELG--ADIVMH 196 (301)
Q Consensus 133 ~~~l------~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~---~~~~~--~di~~~ 196 (301)
++.+ .+++.+|+++......|.+.| +++|.++|++||+++|+||++... ..+. ....+ .|+++
T Consensus 210 e~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~- 288 (457)
T PRK05639 210 ENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII- 288 (457)
T ss_pred HHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE-
Confidence 4443 357899999988877777654 899999999999999999998631 1111 11233 45555
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
++|.+++ |+..|+++++++ +.+ ........+...++..+++++..++.+. ...++..++.++|++.|++
T Consensus 289 -~gK~l~g--G~pi~av~~~~~-i~~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~ 359 (457)
T PRK05639 289 -FGKGVAS--GMGLSGVIGRKE-LMD-LTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLE 359 (457)
T ss_pred -echhhcC--CCcceeEEehHH-HHh-hcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Confidence 9999965 344678877754 444 2211223345567777778777777653 3345555566667776654
No 320
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.57 E-value=1.9e-13 Score=111.87 Aligned_cols=164 Identities=27% Similarity=0.373 Sum_probs=130.4
Q ss_pred HHHHHHHHHhhcCCCceEE---ecchHHHHH-HHHhccCCCCeEE-EcCCCCccHHHHH------hhhcccCCcEEEEec
Q 022194 57 RDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIV-AGDDLYGGTDRLL------SRVTPKTGVVVKRVN 125 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~---~~sG~~ai~-~~~~~~~~g~~Vl-v~~~~y~~~~~~~------~~~~~~~g~~~~~~~ 125 (301)
|+.|+.-.++.|+++.+++ +-|||+||. ++..+++|||+.+ +....|....+.. ...+..+|+.++-++
T Consensus 67 RdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~ 146 (416)
T COG4100 67 RDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVP 146 (416)
T ss_pred hhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecc
Confidence 8899999999999997765 579999996 8889999999987 4444566554443 245677888888888
Q ss_pred CC-----CHHHHHhhcCCCceEEEEe----CCCCCccccccHHHHHHHHHHc--CCEEEEeCCcCCccc-cCccCCCCcE
Q 022194 126 TC-----DLDEVASAIGPWTKLVWVE----SPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVL-SRPLELGADI 193 (301)
Q Consensus 126 ~~-----d~~~l~~~l~~~~~~v~i~----~~~np~G~~~~l~~l~~l~~~~--~~~li~D~~~~~~~~-~~~~~~~~di 193 (301)
+. |.+.++..+++++++|.+. ....|+-.+.++++++++.|+. ++++++|+||+..+. ..|.+.|+|+
T Consensus 147 Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~vGaDl 226 (416)
T COG4100 147 LTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTHVGADL 226 (416)
T ss_pred cccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCccccchhh
Confidence 75 8899999999999999986 2344666667899999999875 699999999998874 4688889999
Q ss_pred EEecccccccCCCCceeeEEEEcchhH
Q 022194 194 VMHSATKFIAGHSDVMAGVLAVKGERL 220 (301)
Q Consensus 194 ~~~S~sK~~~g~~g~~~g~~~~~~~~~ 220 (301)
+.+|+-|..+|.-.--+|+++++.+.+
T Consensus 227 iAGSLIKNpGGgiaktGGYiaGk~~~v 253 (416)
T COG4100 227 IAGSLIKNPGGGIAKTGGYIAGKAELV 253 (416)
T ss_pred hccceeeCCCCceeeccceeechHHHH
Confidence 999999998765333468888875433
No 321
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.57 E-value=5.6e-15 Score=125.99 Aligned_cols=210 Identities=24% Similarity=0.311 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhcCCCceEEecchHHHHHHHHhccCCCCeEEEcCC---CCccHHHHHhhhcccCCcEEEEecCC---CHH
Q 022194 57 RDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDD---LYGGTDRLLSRVTPKTGVVVKRVNTC---DLD 130 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~---~y~~~~~~~~~~~~~~g~~~~~~~~~---d~~ 130 (301)
...+++.++++.|+++++++++..+|+.+++.-+.+|.+|+++.. .+++.++ +..+++..|.+++++-.. .++
T Consensus 49 ~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~~~EvIvsRGelVeiGgsFR-ip~vm~~sGa~lvEVGttN~t~~~ 127 (367)
T PF03841_consen 49 YAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAKGKEVIVSRGELVEIGGSFR-IPDVMRQSGARLVEVGTTNRTHLS 127 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 567788899999999999999999998766665567888998876 3343332 246778888888888765 588
Q ss_pred HHHhhcCCCceEEEEeCCCCCc--ccc--ccHHHHHHHHHHcCCEEEEeCCcCC------------ccccCccCCCCcEE
Q 022194 131 EVASAIGPWTKLVWVESPTNPR--QQI--CDIRKIAEMAHAHGALLLVDNSIMS------------PVLSRPLELGADIV 194 (301)
Q Consensus 131 ~l~~~l~~~~~~v~i~~~~np~--G~~--~~l~~l~~l~~~~~~~li~D~~~~~------------~~~~~~~~~~~di~ 194 (301)
++++++.+++.+++-.+++|.. |.. .+++++++++|+|++++++|-..+. +........|+|++
T Consensus 128 Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV 207 (367)
T PF03841_consen 128 DYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLV 207 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEE
T ss_pred cccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEE
Confidence 9999999999999888777753 323 4799999999999999999998631 11224456799999
Q ss_pred EecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc----------------cHHHHHHHHH
Q 022194 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----------------TMALRVEKQQ 258 (301)
Q Consensus 195 ~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------------~~~~~~~~~~ 258 (301)
++|..|.++|| ++|+++++. .++++++...-....-......+++...++ .+.+..+.+.
T Consensus 208 ~fSGdKlLGGP---QaGiI~Gkk-~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~ 283 (367)
T PF03841_consen 208 TFSGDKLLGGP---QAGIIVGKK-ELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELR 283 (367)
T ss_dssp EEETTSSSSS----S-EEEEEEH-HHHHHHHHHHHTTT-B--HHHHHHHHHHHHH-------------------------
T ss_pred EEECCCcCCCC---CeEEEEeCH-HHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccc
Confidence 99999999887 579999885 566666544333333333333333322222 2334445666
Q ss_pred HHHHHHHHHHHhC
Q 022194 259 DNAQKIAEFLASH 271 (301)
Q Consensus 259 ~~~~~l~~~l~~~ 271 (301)
++++++...|+..
T Consensus 284 ~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 284 ARAERLAAQLKAA 296 (367)
T ss_dssp -------------
T ss_pred ccccccccccccc
Confidence 6677777766653
No 322
>PRK06105 aminotransferase; Provisional
Probab=99.56 E-value=2.5e-13 Score=123.47 Aligned_cols=266 Identities=14% Similarity=0.104 Sum_probs=160.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCc--cccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPY--DYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~--~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ ...+ ..+.+.++...++.+.|.+.+. .+.+.+.+||++|+.
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~-~q~~---~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve 123 (460)
T PRK06105 48 KRYIEGMAGLWSVALGFSEQRLVEAAA-RQMK---KLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND 123 (460)
T ss_pred CEEEEcchhHHhccCCCCCHHHHHHHH-HHHH---hCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 478888633 3458887666555432 2211 1111 1122234567889999998874 346788899999986
Q ss_pred HHHhcc---------CCCCeEEEcCCCCccHHHHHhhhcc------cCC---cEEEEecCC------------------C
Q 022194 85 AVTHLL---------GTGEEIVAGDDLYGGTDRLLSRVTP------KTG---VVVKRVNTC------------------D 128 (301)
Q Consensus 85 ~~~~~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~------~~g---~~~~~~~~~------------------d 128 (301)
+.+++. ....+|+.....||+.......+.. .++ ..+..++.. .
T Consensus 124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06105 124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRL 203 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHH
Confidence 544442 1245788888999987532111110 011 011222211 1
Q ss_pred HHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-Ccccc---CccCCCCcEEEe
Q 022194 129 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMH 196 (301)
Q Consensus 129 ~~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~---~~~~~~~di~~~ 196 (301)
.+++++.+. +++.+|+++......|...+ +++|.++|++||+++|+||++. .|..+ .....+....+.
T Consensus 204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~ 283 (460)
T PRK06105 204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDIL 283 (460)
T ss_pred HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCee
Confidence 355666662 46889999988877787765 9999999999999999999984 44332 222334444455
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHh-------hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEF 267 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~ 267 (301)
+++|.++|. .+..|.+++++ .+.+.+... .+.++...+|..++++++.++.+. +..++..+..+++.+.
T Consensus 284 ~~gK~lggG-~~P~~av~~~~-~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~ 361 (460)
T PRK06105 284 VMSKQLSSS-YQPLSAVLMNE-KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQAR 361 (460)
T ss_pred eeecccccC-cccceEEEEcH-HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 699999652 23467777764 454543321 123445677888888877777663 3456666666666666
Q ss_pred HHh---CCCcceEecCCC
Q 022194 268 LAS---HPRVKKVNYAGL 282 (301)
Q Consensus 268 l~~---~~~v~~v~~p~~ 282 (301)
|++ ++.|..++.-|+
T Consensus 362 L~~l~~~~~v~~vrG~Gl 379 (460)
T PRK06105 362 LRALADHPLVGEVRGVGL 379 (460)
T ss_pred HHHhhcCCCeEEEEecce
Confidence 654 454555554444
No 323
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.56 E-value=1.3e-13 Score=120.93 Aligned_cols=203 Identities=17% Similarity=0.085 Sum_probs=140.3
Q ss_pred HHHHHHHHHhhcCCC---ceEEecc-hHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-----
Q 022194 57 RDALESLLAKLDKAD---RALCFTS-GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----- 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~s-G~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~----- 126 (301)
.+++++.++++++.+ +++++++ ||.|+. ++..++++|+++++......+.. |..+++..|. +..+..
T Consensus 39 ~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~~g~-~~~~~~~~~~~ 115 (349)
T TIGR01364 39 ANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKKYGV-VNVVASGKEGN 115 (349)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCC-cEEEeccccCC
Confidence 778889999999863 3666645 789996 66778889999887765554443 4577888887 554442
Q ss_pred ----CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccc
Q 022194 127 ----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFI 202 (301)
Q Consensus 127 ----~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~ 202 (301)
.++++++ +++++++|.+++..|+||...+ ++++.+++++++|.+.+.+..+-..+ +.|++++|.+|++
T Consensus 116 ~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~-~~d~~~~ssqK~l 187 (349)
T TIGR01364 116 YTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVS-KFGLIYAGAQKNI 187 (349)
T ss_pred CCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHH-HccEEEEeccccc
Confidence 2445444 3468999999999999999876 66777899999999999888763332 2469999999999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHH--------h--h--hhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYF--------L--Q--NAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKI 264 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~--------~--~--~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l 264 (301)
||+|+ |+++.+++.+.+ +.. . . .....+.+....+++..+++. ++.+.++..+.++++
T Consensus 188 -gP~Gl--g~l~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l 263 (349)
T TIGR01364 188 -GPAGL--TVVIVRKDLLGR-ASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLL 263 (349)
T ss_pred -CCCce--EEEEECHHHHhh-cccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 58884 888888765432 211 0 0 111123344444444444433 455667777888888
Q ss_pred HHHHHhCCCc
Q 022194 265 AEFLASHPRV 274 (301)
Q Consensus 265 ~~~l~~~~~v 274 (301)
++.|++.+++
T Consensus 264 ~~~l~~~~gl 273 (349)
T TIGR01364 264 YDTIDNSNGF 273 (349)
T ss_pred HHHHHhCCCe
Confidence 8888888653
No 324
>PRK07678 aminotransferase; Validated
Probab=99.56 E-value=2.6e-13 Score=123.10 Aligned_cols=260 Identities=17% Similarity=0.153 Sum_probs=153.9
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~~ai~~~~ 87 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ . ..+....+.++...++.+.|.+.++.. .+.+++||++|+.+.+
T Consensus 47 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~-~~~~~~~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~Al 122 (451)
T PRK07678 47 NRYLDGMSGLWCVNVGYGRKELAEAAY-EQLK--T-LSYFPLTQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAF 122 (451)
T ss_pred CEEEEccccHHhhcCCCCCHHHHHHHH-HHHH--h-cCccccccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHH
Confidence 367787532 2347877666554432 2211 1 111111234566788889998887544 5677799999986443
Q ss_pred hccC---------CCCeEEEcCCCCccHHHHHhhhcc-----------cCCcEEEEecCC--------------C---HH
Q 022194 88 HLLG---------TGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNTC--------------D---LD 130 (301)
Q Consensus 88 ~~~~---------~g~~Vlv~~~~y~~~~~~~~~~~~-----------~~g~~~~~~~~~--------------d---~~ 130 (301)
.+.+ ...+|+.....||+.......... ..++ ..++.. + ++
T Consensus 123 klAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK07678 123 KIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGF--LHVPPPDCYRMPGIESEDIYDLECVK 200 (451)
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCC--EEeCCCccccccccCChHHHHHHHHH
Confidence 3321 236789889999997533211110 0111 112211 1 22
Q ss_pred HHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-Ccccc---CccCCCCcEEEecc
Q 022194 131 EVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSA 198 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~---~~~~~~~di~~~S~ 198 (301)
.+++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||++. .|..+ .....|....+.++
T Consensus 201 ~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~ 280 (451)
T PRK07678 201 EIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITM 280 (451)
T ss_pred HHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEe
Confidence 3455553 57899999988776777754 8999999999999999999984 33322 22234544444468
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHH------hhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHH-
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYF------LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA- 269 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~- 269 (301)
+|.++|. .+..|.++++++ +.+.+.. ..+..+.+.++..++++++.++.+.+ ..++..+..+++.+.|+
T Consensus 281 gK~lggG-~~Pi~av~~~~~-i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~ 358 (451)
T PRK07678 281 AKGITSA-YLPLSATAVKKE-IYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKE 358 (451)
T ss_pred ecccccC-CcceeEEEEcHH-HHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999653 245788877754 4443332 12344566788888888888777642 34555556566666664
Q ss_pred ---hCCCcceEe
Q 022194 270 ---SHPRVKKVN 278 (301)
Q Consensus 270 ---~~~~v~~v~ 278 (301)
+++.+..++
T Consensus 359 ~~~~~~~v~~vr 370 (451)
T PRK07678 359 ELGEHPLVGDIR 370 (451)
T ss_pred HHhcCCCEEEEE
Confidence 345444443
No 325
>PRK05965 hypothetical protein; Provisional
Probab=99.56 E-value=2.1e-13 Score=123.85 Aligned_cols=266 Identities=15% Similarity=0.126 Sum_probs=157.7
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcccc--CCCCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT--RSGNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~--~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ ...+... .+..+...++.+.|.+.+. .+.+++.+||++|+.
T Consensus 46 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~-~q~~---~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve 121 (459)
T PRK05965 46 HQLLDAFAGLWCVNVGYGQESIVEAAA-EQMR---ELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD 121 (459)
T ss_pred CEEEECcccHHhccCCCCCHHHHHHHH-HHHH---hcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence 478888533 3347777655444432 2211 1111111 1234557788999988863 456777889999986
Q ss_pred HHHhccC--------C-CCeEEEcCCCCccHHHHHhhhc------ccCC-----cEEEEecC-------CC--------H
Q 022194 85 AVTHLLG--------T-GEEIVAGDDLYGGTDRLLSRVT------PKTG-----VVVKRVNT-------CD--------L 129 (301)
Q Consensus 85 ~~~~~~~--------~-g~~Vlv~~~~y~~~~~~~~~~~------~~~g-----~~~~~~~~-------~d--------~ 129 (301)
+.+.+.+ + ..+|+....+||+.......+. ..++ ......+. +| +
T Consensus 122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (459)
T PRK05965 122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV 201 (459)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH
Confidence 4433311 2 4579999999999753211110 0111 11111111 12 2
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc----cccCccCCCCcEEEec
Q 022194 130 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP----VLSRPLELGADIVMHS 197 (301)
Q Consensus 130 ~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~----~~~~~~~~~~di~~~S 197 (301)
+.+++.+. +++.+|+++......|.+.+ +++|.++|++||+++|.||++... .+......|....+.+
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 281 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT 281 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE
Confidence 45666664 56889999988877777653 899999999999999999997632 2222333455455555
Q ss_pred ccccccCCCCceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHH
Q 022194 198 ATKFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL 268 (301)
Q Consensus 198 ~sK~~~g~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l 268 (301)
++|.++|. -+..|.++++++ +.+.+.. ..+..+.+-++..++++++.++.+++ ..++..+...++.+.|
T Consensus 282 ~gKgl~gG-~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l 359 (459)
T PRK05965 282 VAKGLTSG-YVPMGAVLMSDH-VYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGL 359 (459)
T ss_pred echhhccC-CcceeEEEEcHH-HHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 89999653 135677777754 4443321 12334456688888888888777632 3455555666666666
Q ss_pred Hh---CCCcceEecCCC
Q 022194 269 AS---HPRVKKVNYAGL 282 (301)
Q Consensus 269 ~~---~~~v~~v~~p~~ 282 (301)
++ ++.|..++..|+
T Consensus 360 ~~l~~~~~v~~vrG~Gl 376 (459)
T PRK05965 360 DALRAHPLVGDVRGRGL 376 (459)
T ss_pred HhhccCCCEEEEeecce
Confidence 54 455555555544
No 326
>PRK06062 hypothetical protein; Provisional
Probab=99.56 E-value=2.6e-13 Score=122.97 Aligned_cols=266 Identities=16% Similarity=0.153 Sum_probs=159.0
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ . ..+....+.++...++.+.|.++.. .+.+.+++||++|+.+.
T Consensus 53 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~q~~--~-~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A 128 (451)
T PRK06062 53 RRYLDFSSQLVNTNIGHQHPKVVAAIQ-EQAA--R-LCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHA 128 (451)
T ss_pred CEEEEcccCHHhhcCCCCCHHHHHHHH-HHHH--h-cCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHH
Confidence 478888533 3447877766655432 2211 1 1111123345668889999988874 45788889999998644
Q ss_pred Hhc---cCCCCeEEEcCCCCccHHHHHhhhcc----------cCCcEEEEecC---------CC-------HHHHHhhcC
Q 022194 87 THL---LGTGEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNT---------CD-------LDEVASAIG 137 (301)
Q Consensus 87 ~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~----------~~g~~~~~~~~---------~d-------~~~l~~~l~ 137 (301)
+.+ ...+.+|+.....||+.....-.... ..++.....+. .| ++.+++.++
T Consensus 129 lklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~ 208 (451)
T PRK06062 129 VRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIE 208 (451)
T ss_pred HHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHH
Confidence 443 33456799889999998533211111 01111111110 12 566677664
Q ss_pred ----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEecccccccCC
Q 022194 138 ----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSATKFIAGH 205 (301)
Q Consensus 138 ----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~S~sK~~~g~ 205 (301)
+++.+|+++......|.+.| +++|.++|++||+++|+||+++.. -.. .....|....+.+++|.+++.
T Consensus 209 ~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG 288 (451)
T PRK06062 209 LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSG 288 (451)
T ss_pred hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcC
Confidence 46789999988877788876 999999999999999999998732 221 122334444556699999752
Q ss_pred CCceeeEEEEcchhHHHHHHHh--hhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHH-HHHHHHHHh----CCCcce
Q 022194 206 SDVMAGVLAVKGERLAKELYFL--QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNA-QKIAEFLAS----HPRVKK 276 (301)
Q Consensus 206 ~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~-~~l~~~l~~----~~~v~~ 276 (301)
-+..|.+++++ .+.+.+... .+.++.+.++..++++++.++.+.+ ..++..+.. +++.+.|++ ++.+..
T Consensus 289 -~~Pigav~~~~-~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~ 366 (451)
T PRK06062 289 -YVPLGGVAISE-AIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGE 366 (451)
T ss_pred -CcCcEEEEEcH-HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEe
Confidence 12356666665 455544321 1223445578888888888776632 334443343 345455543 555555
Q ss_pred EecCCC
Q 022194 277 VNYAGL 282 (301)
Q Consensus 277 v~~p~~ 282 (301)
++..|+
T Consensus 367 vrG~Gl 372 (451)
T PRK06062 367 VRGLGV 372 (451)
T ss_pred Eecccc
Confidence 665555
No 327
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=1.8e-13 Score=122.95 Aligned_cols=267 Identities=13% Similarity=0.082 Sum_probs=155.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ ......+..+.++...++.+.|.+... .+.+.+++||++|+.+.
T Consensus 40 ~~ylD~~~g~~~~~lGh~~p~i~~ai~-~q~~--~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~A 116 (422)
T PRK05630 40 STVIDAMSSWWSAAHGHGHPRLKAAAH-KQID--TMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVA 116 (422)
T ss_pred CEEEEcchhHHHhcCCCCCHHHHHHHH-HHHH--hCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHH
Confidence 478888533 4457877766665543 2211 111111111234567888999988863 45788899999998644
Q ss_pred HhccC---------CCCeEEEcCCCCccHHHHHhhhccc-------CC---cEEEEecCC-----C-------HHHHHhh
Q 022194 87 THLLG---------TGEEIVAGDDLYGGTDRLLSRVTPK-------TG---VVVKRVNTC-----D-------LDEVASA 135 (301)
Q Consensus 87 ~~~~~---------~g~~Vlv~~~~y~~~~~~~~~~~~~-------~g---~~~~~~~~~-----d-------~~~l~~~ 135 (301)
+.+.+ .+.+|+.....||+.......+... ++ -.+..++.. + .+.+++.
T Consensus 117 lklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 196 (422)
T PRK05630 117 IKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELL 196 (422)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHH
Confidence 33311 2357999999999864322111110 00 011112111 1 2345555
Q ss_pred cCCCceEEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccC---ccCCCCcEEEecccccccCCC
Q 022194 136 IGPWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR---PLELGADIVMHSATKFIAGHS 206 (301)
Q Consensus 136 l~~~~~~v~i~~~-~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~---~~~~~~di~~~S~sK~~~g~~ 206 (301)
+.+++.+|+++.. ....|...+ +++|.++|++||+++|+||++.. |..+. ....+.+..+.+++|.++|.
T Consensus 197 ~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG- 275 (422)
T PRK05630 197 IDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGG- 275 (422)
T ss_pred HhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcC-
Confidence 6678999999974 666676543 89999999999999999999842 22111 12234443444799999552
Q ss_pred CceeeEEEEcchhHHHHHHHh------hhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHHh---CCCcc
Q 022194 207 DVMAGVLAVKGERLAKELYFL------QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS---HPRVK 275 (301)
Q Consensus 207 g~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~---~~~v~ 275 (301)
-..+|++++++ .+.+.+... .+..+...++..++++...++.+.+ ..++..++.+++++.|+. ++.|.
T Consensus 276 ~~p~~av~~~~-~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~ 354 (422)
T PRK05630 276 FMSFAATLCTD-KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVA 354 (422)
T ss_pred ccccceeeccH-HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcCCCee
Confidence 12357777764 444543211 2234456778888888777776642 445666666667766653 44454
Q ss_pred eEecCCC
Q 022194 276 KVNYAGL 282 (301)
Q Consensus 276 ~v~~p~~ 282 (301)
.++.-|+
T Consensus 355 ~vRg~Gl 361 (422)
T PRK05630 355 DVRVLGA 361 (422)
T ss_pred eeecccc
Confidence 4544443
No 328
>PRK07482 hypothetical protein; Provisional
Probab=99.56 E-value=2.4e-13 Score=123.55 Aligned_cols=265 Identities=14% Similarity=0.059 Sum_probs=155.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcc--ccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYD--YTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~--y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ ...+. +..+.++...++.+.|.+... .+.+.+++||++|+.
T Consensus 50 ~~ylD~~sg~~~~~lGh~~p~v~~Av~-~q~~---~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve 125 (461)
T PRK07482 50 RRYIDAFAGLYCVNVGYGRTEVAEAIA-EQAK---ELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANE 125 (461)
T ss_pred CEEEEcccchhhhcCCCCCHHHHHHHH-HHHH---hcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence 478888643 3357877666555432 2211 11111 112245668889999988873 457888899999986
Q ss_pred HHHhccC---------CCCeEEEcCCCCccHHHHHhhhc---------c--cCCcEEEEecC----------------CC
Q 022194 85 AVTHLLG---------TGEEIVAGDDLYGGTDRLLSRVT---------P--KTGVVVKRVNT----------------CD 128 (301)
Q Consensus 85 ~~~~~~~---------~g~~Vlv~~~~y~~~~~~~~~~~---------~--~~g~~~~~~~~----------------~d 128 (301)
+.+.+.+ .+.+|+.....||+.......+. . ..+......+. .+
T Consensus 126 ~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (461)
T PRK07482 126 TQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYC 205 (461)
T ss_pred HHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHH
Confidence 4444331 24678988999999642211110 0 01111111111 02
Q ss_pred HHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cc---cCccCCCCcEEEe
Q 022194 129 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VL---SRPLELGADIVMH 196 (301)
Q Consensus 129 ~~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~---~~~~~~~~di~~~ 196 (301)
++.+++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||++... -. ......|....+.
T Consensus 206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv 285 (461)
T PRK07482 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI 285 (461)
T ss_pred HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE
Confidence 466676663 46889999988777777753 899999999999999999997632 22 2222334444444
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEF 267 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~ 267 (301)
+++|.++|. -+..|.++++++ +.+.+.. ..+..+.+-++..+++++..++.+.+ ..++..+..+++.+.
T Consensus 286 ~~gKgl~gG-~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~ 363 (461)
T PRK07482 286 TVAKGLTSA-YAPLSGSIVGEK-VWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRAR 363 (461)
T ss_pred EEccccccC-ccccceeeecHH-HHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 489999653 123566666644 4443321 11333455678888888888776532 335555555566666
Q ss_pred HH----hCCCcceEecCC
Q 022194 268 LA----SHPRVKKVNYAG 281 (301)
Q Consensus 268 l~----~~~~v~~v~~p~ 281 (301)
|+ +++.+..++..|
T Consensus 364 L~~l~~~~~~v~~vrG~G 381 (461)
T PRK07482 364 LRAAFGDHPLVGEVRGVG 381 (461)
T ss_pred HHHHHhcCCCEEEEeece
Confidence 54 456555555443
No 329
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.56 E-value=1.4e-13 Score=123.81 Aligned_cols=266 Identities=13% Similarity=0.061 Sum_probs=154.8
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
.+++||.++ +..+|..++.+..+.. .+.+ .........+.++...++.+.|.++.. .+.+.+++||++|+.+.
T Consensus 43 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~-~q~~--~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~A 119 (428)
T PRK07986 43 RRLVDGMSSWWAAIHGYNHPQLNAAMK-SQID--AMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA 119 (428)
T ss_pred CEEEEcchhHHhhcCCCCCHHHHHHHH-HHHh--hcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHH
Confidence 367787532 3457877655554432 2211 111111112245668888899988874 35788889999998644
Q ss_pred Hhcc--------CCCCeEEEcCCCCccHHHHHhhhccc-------CC---cEEEEec-----------CCCHHHHHhhcC
Q 022194 87 THLL--------GTGEEIVAGDDLYGGTDRLLSRVTPK-------TG---VVVKRVN-----------TCDLDEVASAIG 137 (301)
Q Consensus 87 ~~~~--------~~g~~Vlv~~~~y~~~~~~~~~~~~~-------~g---~~~~~~~-----------~~d~~~l~~~l~ 137 (301)
+.+. ....+|+....+||+.....-.+... +. -.+..++ ..|.+++++.++
T Consensus 120 lklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~ 199 (428)
T PRK07986 120 MKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMA 199 (428)
T ss_pred HHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHH
Confidence 3332 23468999999999864221111000 00 0111121 124567777774
Q ss_pred ---CCceEEEEeCC-CCCccccc----cHHHHHHHHHHcCCEEEEeCCcCC-ccccC---ccCCCCcEEEecccccccCC
Q 022194 138 ---PWTKLVWVESP-TNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMS-PVLSR---PLELGADIVMHSATKFIAGH 205 (301)
Q Consensus 138 ---~~~~~v~i~~~-~np~G~~~----~l~~l~~l~~~~~~~li~D~~~~~-~~~~~---~~~~~~di~~~S~sK~~~g~ 205 (301)
+++.+|+++.. ....|... .+++|.++|++||+++|+||++.. |..+. ....|.+..+.+++|.++|
T Consensus 200 ~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~g- 278 (428)
T PRK07986 200 AHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTG- 278 (428)
T ss_pred hCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhC-
Confidence 46778888874 55455543 289999999999999999999842 22221 1223433333359999954
Q ss_pred CC-ceeeEEEEcchhHHHHHHHh-----hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh---CCCc
Q 022194 206 SD-VMAGVLAVKGERLAKELYFL-----QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS---HPRV 274 (301)
Q Consensus 206 ~g-~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~---~~~v 274 (301)
| +..+.+++++ .+.+.+... .+..+.+.++..+++++..++.+. +..++..++.+++++.|++ ++.|
T Consensus 279 -G~~p~~av~~~~-~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~i 356 (428)
T PRK07986 279 -GTMTLSATLTTR-EVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMV 356 (428)
T ss_pred -CcccCcchhchH-HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 4 3456666664 455544321 133345567888888888877664 3456677777777777765 4545
Q ss_pred ceEecCCC
Q 022194 275 KKVNYAGL 282 (301)
Q Consensus 275 ~~v~~p~~ 282 (301)
..++..|+
T Consensus 357 ~~vRg~Gl 364 (428)
T PRK07986 357 ADVRVLGA 364 (428)
T ss_pred EeEeccce
Confidence 44554443
No 330
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.56 E-value=1.5e-13 Score=123.58 Aligned_cols=249 Identities=12% Similarity=0.052 Sum_probs=152.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~ 86 (301)
..++||.++ +.-+|..++.+..+.. .+.+ ... .+ ...++...++.+.|.+.+.. +.+.+++||++|+...
T Consensus 53 ~~yiD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~~~--~~-~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~A 126 (433)
T PRK00615 53 KTFIDFCGSWGSLIHGHSHPKICDAIQ-QGAE--RGT--SY-GLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTA 126 (433)
T ss_pred CEEEEcccchhccccCCCCHHHHHHHH-HHHH--hCC--CC-CCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHH
Confidence 468888643 3347887766665532 1211 111 11 12345578888888888754 4788889999998644
Q ss_pred Hhcc---CCCCeEEEcCCCCccHHHH-Hhhh--c--------ccC-----CcEEEEecCCCHHHHHhhcC---CCceEEE
Q 022194 87 THLL---GTGEEIVAGDDLYGGTDRL-LSRV--T--------PKT-----GVVVKRVNTCDLDEVASAIG---PWTKLVW 144 (301)
Q Consensus 87 ~~~~---~~g~~Vlv~~~~y~~~~~~-~~~~--~--------~~~-----g~~~~~~~~~d~~~l~~~l~---~~~~~v~ 144 (301)
+++. ..+.+|+.....||+.... +... . ... ......++..|.+++++.+. +++.+|+
T Consensus 127 iklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI 206 (433)
T PRK00615 127 VRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVI 206 (433)
T ss_pred HHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEE
Confidence 4433 3346788888899996421 1000 0 000 01122234457888888774 4678889
Q ss_pred EeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc---cccCccCCC--CcEEEecccccccCCCCceeeEEEE
Q 022194 145 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP---VLSRPLELG--ADIVMHSATKFIAGHSDVMAGVLAV 215 (301)
Q Consensus 145 i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~---~~~~~~~~~--~di~~~S~sK~~~g~~g~~~g~~~~ 215 (301)
++......|.+.| +++|.++|++||+++|+||++... ........+ .|++ +++|.++| |+.+|++++
T Consensus 207 ~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~--~~gK~lgg--G~p~~av~~ 282 (433)
T PRK00615 207 FEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDIT--VYGKILGG--GLPAAAVVA 282 (433)
T ss_pred ECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCeE--EEcccccC--Ccceeeeee
Confidence 9988887788766 679999999999999999998421 111111223 4554 59999964 345788887
Q ss_pred cchhHHHHHHHhh---hhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 216 KGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 216 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
++ .+.+.+.... ...+...++..++++++.++.+. ..+++..++.+++.+.|++
T Consensus 283 ~~-~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 283 HK-SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEE 341 (433)
T ss_pred cH-HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 65 4545432111 12234457788888877777653 3456666666677555554
No 331
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.55 E-value=2.1e-13 Score=123.61 Aligned_cols=267 Identities=15% Similarity=0.147 Sum_probs=156.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~ 86 (301)
..+|||.++ +.-+|..++.+..+.. .+.+ .........+..+...++.+.|.+..+. +.+.+++||++|+.+.
T Consensus 54 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~ql~--~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~A 130 (453)
T PRK06943 54 RRYLDAISSWWVNLFGHANPRINAALK-DQLD--TLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIA 130 (453)
T ss_pred CEEEEcchHHHHhcCCCCCHHHHHHHH-HHHH--hcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHH
Confidence 367787544 4457877766665432 2211 1111111122445677888888888753 4678889999998644
Q ss_pred Hhcc---------CCCCeEEEcCCCCccHHHHHhhhccc-----------CCcEEEEecC---------------CCHHH
Q 022194 87 THLL---------GTGEEIVAGDDLYGGTDRLLSRVTPK-----------TGVVVKRVNT---------------CDLDE 131 (301)
Q Consensus 87 ~~~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~~-----------~g~~~~~~~~---------------~d~~~ 131 (301)
+.+. ..+.+|+.....||+.......+... .+......+. .+++.
T Consensus 131 lKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 210 (453)
T PRK06943 131 LKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALAD 210 (453)
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHH
Confidence 4432 12467999999999975221111100 0111111110 12466
Q ss_pred HHhhcC---CCceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-cccc---CccCCCCcEEEeccc
Q 022194 132 VASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIVMHSAT 199 (301)
Q Consensus 132 l~~~l~---~~~~~v~i~~-~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~---~~~~~~~di~~~S~s 199 (301)
+++.+. +++.+|+++. .....|.+.+ +++|.++|++||+++|+||++.. |-.+ .....|....+.+++
T Consensus 211 l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~g 290 (453)
T PRK06943 211 VRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLS 290 (453)
T ss_pred HHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeee
Confidence 666664 5788999998 4676777653 89999999999999999999753 2222 222345444445589
Q ss_pred ccccCCCCceeeEEEEcchhHHHHHHH------hhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHHh-
Q 022194 200 KFIAGHSDVMAGVLAVKGERLAKELYF------LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS- 270 (301)
Q Consensus 200 K~~~g~~g~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~- 270 (301)
|.++|. -+..|.++++++ +.+.+.. ..+..+.+-++..++++++.++.+.+ ..++..+..+++.+.|++
T Consensus 291 Kgl~gG-~~Pi~av~~~~e-i~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l 368 (453)
T PRK06943 291 KGISGG-YLPLSLVLSRDA-IFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPL 368 (453)
T ss_pred hhhccC-cccceEEEEcHH-HHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999652 134677777754 4443321 11233444577788887777776632 345555566666666654
Q ss_pred --CCCcceEecCCC
Q 022194 271 --HPRVKKVNYAGL 282 (301)
Q Consensus 271 --~~~v~~v~~p~~ 282 (301)
++.|..++.-|+
T Consensus 369 ~~~~~v~~vrG~Gl 382 (453)
T PRK06943 369 AAHPQVRHLRQRGT 382 (453)
T ss_pred hcCCCEEeEecccc
Confidence 455555554443
No 332
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.55 E-value=9e-14 Score=122.71 Aligned_cols=203 Identities=19% Similarity=0.166 Sum_probs=131.7
Q ss_pred HHHHHHHHHhhcCCC---ceEEecc-hHHHHH-HHHhccC---CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKAD---RALCFTS-GMAALA-AVTHLLG---TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~s-G~~ai~-~~~~~~~---~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.++.++.++++++.+ +++++++ ||+++. ++..++. +++.|++ ..+...+..+++..|++++.++.+
T Consensus 46 ~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-----g~~~~~~~~~a~~~g~~~~~~~~~~ 120 (355)
T cd00611 46 VNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT-----GAWSAKAAKEAKRYGGVVVIVAAKE 120 (355)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-----CHHHHHHHHHHHhcCCCcEEEeccc
Confidence 778899999999963 3555555 789986 5566666 4455544 222222235667778888877743
Q ss_pred -----C-HHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEeccccc
Q 022194 128 -----D-LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKF 201 (301)
Q Consensus 128 -----d-~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~ 201 (301)
+ .+..+..+++++++|.+++..|.||...+ ++++.+|+++++|.+++.|..+-..+ ..++++.|.+|+
T Consensus 121 ~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~-~~~~~~ss~~K~ 194 (355)
T cd00611 121 EGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVS-KFGVIYAGAQKN 194 (355)
T ss_pred ccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHH-HhCEEEeecccc
Confidence 3 33344456678999999999999999832 34556999999999999988763332 134677779999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHh-----------hhhc-CCCCCHHhHHHHHccccc------HHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFL-----------QNAE-GSGLAPFDCWICLRGVKT------MALRVEKQQDNAQK 263 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~ 263 (301)
+ ||+|+ |+++.+++.+.+ +... .... ..+.+....+.+.++++. ++.+.++..+.+++
T Consensus 195 l-GP~G~--g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~ 270 (355)
T cd00611 195 L-GPAGV--TVVIVRKDLLGK-ARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQL 270 (355)
T ss_pred c-CCCce--EEEEECHHHHhh-cccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 8 68884 888888654422 1110 0111 123333344444444443 34455677778888
Q ss_pred HHHHHHhCCCc
Q 022194 264 IAEFLASHPRV 274 (301)
Q Consensus 264 l~~~l~~~~~v 274 (301)
+.+.|++++++
T Consensus 271 l~~~l~~~~gl 281 (355)
T cd00611 271 LYDTIDNSNGF 281 (355)
T ss_pred HHHHHHhCccc
Confidence 88888888764
No 333
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=4.4e-13 Score=121.28 Aligned_cols=251 Identities=17% Similarity=0.133 Sum_probs=151.8
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~ 85 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ .........+.++...++.+.|.+... .+.+.+++||++|+.+
T Consensus 54 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~ql~--~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~ 130 (441)
T PRK05769 54 NVYLDFNAGIAVTNVGHAHPKVVKAVK-EQAE--KFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEA 130 (441)
T ss_pred CEEEECCCchhhcccCCCCHHHHHHHH-HHHH--hccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHH
Confidence 478888644 3358877766555432 2211 111111112245667889999988874 3578888999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhccc----------CCcEEEEecCC----------C--------HHHHHh
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPK----------TGVVVKRVNTC----------D--------LDEVAS 134 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~----------~g~~~~~~~~~----------d--------~~~l~~ 134 (301)
.+++ ...+++|+.....||+.....-.+... ..-.+..++.. + ++.+++
T Consensus 131 AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 210 (441)
T PRK05769 131 AIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIED 210 (441)
T ss_pred HHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHH
Confidence 4433 234567888899999986432121100 00112222211 1 233554
Q ss_pred -hc-----CCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-cccc---CccCCC--CcEEEecc
Q 022194 135 -AI-----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELG--ADIVMHSA 198 (301)
Q Consensus 135 -~l-----~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~---~~~~~~--~di~~~S~ 198 (301)
.+ .+++.+|+++......|.+.+ +++|.++|++||+++|+||++.. +... .....+ .|++ ++
T Consensus 211 ~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv--t~ 288 (441)
T PRK05769 211 YLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII--TL 288 (441)
T ss_pred HHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE--EE
Confidence 22 256889999988888888877 99999999999999999999873 2211 111223 4655 58
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH-HHHHHHHHHHHHHHHHHHh
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA-LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~l~~~l~~ 270 (301)
+|.+++ |++.|+++++++ +.... ......+.+.++..+++++..++.+. +..++..++.++|++.|++
T Consensus 289 ~K~l~~--G~p~gav~~~~~-i~~~~-~~~~~~T~~g~p~~~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~ 357 (441)
T PRK05769 289 AKAIAG--GLPLGAVIGRAE-LMFLP-PGSHANTFGGNPVAAAAALATLEELEEGLLENAQKLGEYLRKELKE 357 (441)
T ss_pred cccccC--CcccEEEEEehh-hhhcC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999964 466788887754 33321 11222334457777777777777654 3446666667777777754
No 334
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.54 E-value=9.4e-14 Score=134.60 Aligned_cols=187 Identities=22% Similarity=0.281 Sum_probs=140.8
Q ss_pred CCCCCCccccCeeecceeecCCCCCCCCccccCCCC-------chHHHHHHHHHhhcCCC--ceEEecchHHHHHH-HHh
Q 022194 19 EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGN-------PTRDALESLLAKLDKAD--RALCFTSGMAALAA-VTH 88 (301)
Q Consensus 19 ~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~-------~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~-~~~ 88 (301)
+..|++...|+++.+.....+. +...|.+|.. ....+++..++++.|++ ++-++.++|++..+ +++
T Consensus 82 g~G~y~~~~P~vi~~~i~~~~~----~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a 157 (954)
T PRK05367 82 GQGYYGTHTPPVILRNILENPA----WYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALA 157 (954)
T ss_pred CCCCCCCcCcHHHHHHHHhCcc----hhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHh
Confidence 4567777777777666655555 2334566521 22566778899999988 56777788766643 333
Q ss_pred c-cCC--CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 022194 89 L-LGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (301)
Q Consensus 89 ~-~~~--g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~ 165 (301)
+ +++ +++|++++..|+.+...|+..++..|++++.++.++ ++. .+++.++++..|++ +|.+.|+++|+++|
T Consensus 158 ~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d~~---~~~~~~vlvq~p~~-~G~i~d~~~i~~~a 231 (954)
T PRK05367 158 KRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--ALD---HDDVFGVLLQYPGT-SGEVRDYTALIAAA 231 (954)
T ss_pred hhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--CCC---cccEEEEEEecCCC-CeeeccHHHHHHHH
Confidence 2 344 489999999999999888888899999999999653 111 24566677777655 99999999999999
Q ss_pred HHcCCEEEEeCCc-CCccccCccCCCCcEEEeccccc-----ccCCCCceeeEEEEcch
Q 022194 166 HAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 166 ~~~~~~li~D~~~-~~~~~~~~~~~~~di~~~S~sK~-----~~g~~g~~~g~~~~~~~ 218 (301)
|++|+++++|..+ +.+....+.+.|+|++++|.+|| +||| + .|+++++++
T Consensus 232 h~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP-~--aGflavr~~ 287 (954)
T PRK05367 232 HARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGP-H--AAYFAVRDA 287 (954)
T ss_pred HHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCC-C--EEEEEECHH
Confidence 9999999999977 45556678899999999999999 7665 3 799999864
No 335
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.54 E-value=2.3e-13 Score=123.60 Aligned_cols=265 Identities=14% Similarity=0.075 Sum_probs=155.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-----ceEEe-cchHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-----RALCF-TSGMAA 82 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-----~~i~~-~sG~~a 82 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ +...+....+.++...++.+.|.+....+ ..+++ +||++|
T Consensus 63 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~ql~--~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEA 139 (464)
T PRK06938 63 RQFIDCLAGAGTLALGHNHPVVIEAIQ-QVLA--DELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDA 139 (464)
T ss_pred CEEEEccCCccccccCCCCHHHHHHHH-HHHH--hhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHH
Confidence 478888533 3447877666555432 2211 11111111224566778888888765321 34455 699999
Q ss_pred HHHHHhcc---CCCCeEEEcCCCCccHHHHHhhhccc------CC---cEEEEecCC-----------------CHHHHH
Q 022194 83 LAAVTHLL---GTGEEIVAGDDLYGGTDRLLSRVTPK------TG---VVVKRVNTC-----------------DLDEVA 133 (301)
Q Consensus 83 i~~~~~~~---~~g~~Vlv~~~~y~~~~~~~~~~~~~------~g---~~~~~~~~~-----------------d~~~l~ 133 (301)
+.+.+++. ..+.+|+.....||+........... .+ -.+..++.. +++.++
T Consensus 140 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 219 (464)
T PRK06938 140 VEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLE 219 (464)
T ss_pred HHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHH
Confidence 86544442 34568898899999975432211110 00 012222211 245667
Q ss_pred hhcCC------CceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc----cccCccCCCCcEEEeccc
Q 022194 134 SAIGP------WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP----VLSRPLELGADIVMHSAT 199 (301)
Q Consensus 134 ~~l~~------~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~----~~~~~~~~~~di~~~S~s 199 (301)
+.+.+ ++.+|+++......|.+.+ +++|.++|++||+++|.||++... .+......|....+.+++
T Consensus 220 ~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~g 299 (464)
T PRK06938 220 NLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLS 299 (464)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEee
Confidence 76652 5789999987776677653 899999999999999999997532 222222345544455589
Q ss_pred ccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHHh----CCC
Q 022194 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPR 273 (301)
Q Consensus 200 K~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~----~~~ 273 (301)
|.++| |+..|.++++++ + +.+....+..+.+-++..++++++.++.+.+ ..++..+..+++.+.|++ ++.
T Consensus 300 Kglgg--G~PlsAv~~~~~-~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~ 375 (464)
T PRK06938 300 KAIGG--SLPLAVVVYREW-L-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQ 375 (464)
T ss_pred ccccC--CCceEEEeehhH-h-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99965 466788887754 3 3222222334455677888888888776532 334555555566666543 555
Q ss_pred cceEecCCC
Q 022194 274 VKKVNYAGL 282 (301)
Q Consensus 274 v~~v~~p~~ 282 (301)
+..|+..|+
T Consensus 376 i~~VrG~Gl 384 (464)
T PRK06938 376 LGDVRGRGL 384 (464)
T ss_pred eeeeeccce
Confidence 555555544
No 336
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.54 E-value=3e-13 Score=121.45 Aligned_cols=154 Identities=25% Similarity=0.326 Sum_probs=123.8
Q ss_pred HHHHHHHHHhhcCCCceEEecchH-HHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------
Q 022194 57 RDALESLLAKLDKADRALCFTSGM-AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~-~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------- 127 (301)
..+.++..++.||++...++.+|| .++ .++++++++||.|++++++|.+.... +-..|+..+++.+.
T Consensus 72 i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~g----lilaGa~Pvyl~p~~np~~gi 147 (557)
T COG1982 72 IKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHG----LILAGATPVYLEPSRNPLYGI 147 (557)
T ss_pred HHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHH----HHHcCCceEEecCCCCccccc
Confidence 789999999999999999999997 666 58899999999999999999888632 44566666666643
Q ss_pred ----CHHHHHhhcC--CCc-eEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCc-----cccC-ccCCCCcEE
Q 022194 128 ----DLDEVASAIG--PWT-KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSP-----VLSR-PLELGADIV 194 (301)
Q Consensus 128 ----d~~~l~~~l~--~~~-~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~-----~~~~-~~~~~~di~ 194 (301)
+.+.+++.+. +.. +++++++|++ .|.+.++++|.+.++++++|+.+|++|+.. ..+. ....++|++
T Consensus 148 ~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~ 226 (557)
T COG1982 148 IGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFV 226 (557)
T ss_pred cCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEE
Confidence 6777877665 234 7889999988 899999999999999999999999998742 2222 223688999
Q ss_pred EecccccccCCCCceeeEEEEcc
Q 022194 195 MHSATKFIAGHSDVMAGVLAVKG 217 (301)
Q Consensus 195 ~~S~sK~~~g~~g~~~g~~~~~~ 217 (301)
+-|.||.+++.. +++.+..++
T Consensus 227 tqS~HK~l~alS--QaS~iHv~~ 247 (557)
T COG1982 227 TQSTHKLLAALS--QASMIHVKD 247 (557)
T ss_pred Eechhhhhhhhh--hhHHHhhCC
Confidence 999999987653 678887775
No 337
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.54 E-value=2.7e-13 Score=122.02 Aligned_cols=252 Identities=13% Similarity=0.093 Sum_probs=149.8
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
.++|||.++ +..+|..++.+..+.. .+.+ +........+.++...++.+.|.+... .+.+.+++||++|+.+.
T Consensus 44 ~~ylD~~~g~~~~~lGh~~p~v~~ai~-~q~~--~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~A 120 (429)
T PRK06173 44 RRLIDGMSSWWAALHGYNHPRLNAAAT-NQLA--KMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVA 120 (429)
T ss_pred CEEEEccchHHhccCCCCCHHHHHHHH-HHHH--hcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHH
Confidence 467887532 4567877766555432 2211 111111111234567888888888763 45788889999998644
Q ss_pred HhccC--------C-CCeEEEcCCCCccHHHHHhhhcc-------cCC---cEEEEecCC-----------CHHHHHhhc
Q 022194 87 THLLG--------T-GEEIVAGDDLYGGTDRLLSRVTP-------KTG---VVVKRVNTC-----------DLDEVASAI 136 (301)
Q Consensus 87 ~~~~~--------~-g~~Vlv~~~~y~~~~~~~~~~~~-------~~g---~~~~~~~~~-----------d~~~l~~~l 136 (301)
+.+.+ + +.+|+.....||+.......+.. .++ ..+..++.. +++.+++.+
T Consensus 121 lklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i 200 (429)
T PRK06173 121 MKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLL 200 (429)
T ss_pred HHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHH
Confidence 33321 2 45788889999985321111100 000 011122211 355566666
Q ss_pred C---CCceEEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccCc---cCCC--CcEEEecccccc
Q 022194 137 G---PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP---LELG--ADIVMHSATKFI 202 (301)
Q Consensus 137 ~---~~~~~v~i~~~-~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~~---~~~~--~di~~~S~sK~~ 202 (301)
. +++.+|+++.. ....|...+ +++|.++|++||+++|+||++.. |..+.. ...+ .|+++ ++|.+
T Consensus 201 ~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l 278 (429)
T PRK06173 201 EQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMC--IGKAL 278 (429)
T ss_pred HhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEE--eehhh
Confidence 4 57889999975 676677643 89999999999999999999842 111111 1233 45554 99999
Q ss_pred cCCCCc-eeeEEEEcchhHHHHHHH-----hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 203 AGHSDV-MAGVLAVKGERLAKELYF-----LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 203 ~g~~g~-~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
+| |+ ..+.++.++ .+.+.+.. ..+..+...++..++++++.++.+. ...++..++.+++++.|++
T Consensus 279 ~g--G~~p~~a~~~~~-~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 351 (429)
T PRK06173 279 TG--GYLTLSATITTE-AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAP 351 (429)
T ss_pred hC--CccccceEEecH-HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 54 42 356666664 44444321 1222334567888888888877764 3457777777888888764
No 338
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.53 E-value=2.5e-13 Score=129.11 Aligned_cols=149 Identities=21% Similarity=0.258 Sum_probs=115.8
Q ss_pred chHHHHHHHHHhhcCCCceEEec-chHHHH-HHHHhc----c----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEe
Q 022194 55 PTRDALESLLAKLDKADRALCFT-SGMAAL-AAVTHL----L----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~-sG~~ai-~~~~~~----~----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~ 124 (301)
....++++++++++|.+.+-+.. +|+.+- ..++++ . ...++|+++...|+... ..+...|++++.+
T Consensus 543 q~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp----asa~~~GieVv~V 618 (954)
T PRK12566 543 AMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP----ASAQMAGMRVVIV 618 (954)
T ss_pred HHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH----HHHHHCCCEEEEe
Confidence 34788999999999999766655 566443 233222 1 12467889998887775 3355679999999
Q ss_pred cCC-----CHHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCc--cccCccCCCCcEE
Q 022194 125 NTC-----DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSP--VLSRPLELGADIV 194 (301)
Q Consensus 125 ~~~-----d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~--~~~~~~~~~~di~ 194 (301)
+.+ |+++|+++++ +++++|++++|++-.+...++++|+++||++|+++++|.++..+ ....+.+.|+|++
T Consensus 619 p~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~ 698 (954)
T PRK12566 619 ECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVS 698 (954)
T ss_pred ccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEE
Confidence 874 8999999987 68888999999886555567999999999999999999998743 3445678999999
Q ss_pred EecccccccCCCC
Q 022194 195 MHSATKFIAGHSD 207 (301)
Q Consensus 195 ~~S~sK~~~g~~g 207 (301)
++++||+|++|.|
T Consensus 699 ~~s~HKtf~~P~G 711 (954)
T PRK12566 699 HMNLHKTFCIPHG 711 (954)
T ss_pred EecCCcccCcCcc
Confidence 9999999987654
No 339
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.53 E-value=5.2e-13 Score=129.11 Aligned_cols=193 Identities=20% Similarity=0.220 Sum_probs=137.3
Q ss_pred eeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCC-------chHHHHHHHHHhhcCCC--ceEEecchHHHH
Q 022194 13 LMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGN-------PTRDALESLLAKLDKAD--RALCFTSGMAAL 83 (301)
Q Consensus 13 ~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~-------~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai 83 (301)
+.+|. +..|++...++++.......++ ....|.+|.. ....+++..++++.|++ ++-++.++|++.
T Consensus 104 ~~~fi-G~G~y~~~~P~~v~~~i~~~~~----~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaa 178 (993)
T PLN02414 104 FKSYI-GMGYYNTHVPPVILRNILENPG----WYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAA 178 (993)
T ss_pred ccccc-CCCCCCccCCHHHHHHHHhChH----HHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHH
Confidence 45555 5566666556666455444443 2234555522 22567778899999987 677777778766
Q ss_pred H-HHHhc-cCC--CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 022194 84 A-AVTHL-LGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 84 ~-~~~~~-~~~--g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~ 159 (301)
. ++++. +++ +++|++++..|+.+...++..++..|++++.++.++.+ ...+.+..+++..|++ +|.+.|++
T Consensus 179 ea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~----~~~~~v~~vlvq~P~~-~G~v~dv~ 253 (993)
T PLN02414 179 EAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD----YSSGDVCGVLVQYPAT-DGEVLDYA 253 (993)
T ss_pred HHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc----cccCceEEEEEecCCC-CeEEcCHH
Confidence 4 33333 343 47899999999999999988899999999999865422 1233455666666655 89999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCc--cccCccCCCCcEEEecccccc-----cCCCCceeeEEEEcchh
Q 022194 160 KIAEMAHAHGALLLVDNSIMSP--VLSRPLELGADIVMHSATKFI-----AGHSDVMAGVLAVKGER 219 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~--~~~~~~~~~~di~~~S~sK~~-----~g~~g~~~g~~~~~~~~ 219 (301)
+|+++||++|+++++ .+...+ ....+.+.|+|+++++.+||. +|| ..|+++++++.
T Consensus 254 ~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP---~aGflavr~~~ 316 (993)
T PLN02414 254 EFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGP---HAAFLATSQEY 316 (993)
T ss_pred HHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCC---CeeEEEECHHH
Confidence 999999999999999 555433 333577889999999999996 443 37999998653
No 340
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=5.5e-13 Score=121.24 Aligned_cols=266 Identities=14% Similarity=0.147 Sum_probs=154.0
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ +........+..+...++.+.|.++.. .+.+.+++||++|+.+.
T Consensus 47 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~ql~--~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~A 123 (466)
T PRK07030 47 KRYLDAVSSWWVNVFGHANPRINQRIK-DQVD--QLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVA 123 (466)
T ss_pred CEEEEcchhHHhhcCCCCCHHHHHHHH-HHHH--hcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHH
Confidence 367787533 3447877666555432 2211 111111112234567888899888763 45788889999998644
Q ss_pred Hhcc---------CCCCeEEEcCCCCccHHHHHhhhccc------CC---cEEEEecCC-----------------CHHH
Q 022194 87 THLL---------GTGEEIVAGDDLYGGTDRLLSRVTPK------TG---VVVKRVNTC-----------------DLDE 131 (301)
Q Consensus 87 ~~~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~~------~g---~~~~~~~~~-----------------d~~~ 131 (301)
+.+. ..+.+|+.....||+.......+... ++ ..+..++.. +++.
T Consensus 124 lKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~ 203 (466)
T PRK07030 124 LKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAH 203 (466)
T ss_pred HHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHH
Confidence 4432 12457888899999875332111110 00 011112111 2455
Q ss_pred HHhhcC---CCceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-c---cccCccCCCCcEEEeccc
Q 022194 132 VASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-P---VLSRPLELGADIVMHSAT 199 (301)
Q Consensus 132 l~~~l~---~~~~~v~i~~-~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~---~~~~~~~~~~di~~~S~s 199 (301)
+++.+. +++.+|+++. .....|.+.+ +++|.++|++||+++|+||++.. | .+......+....+.+++
T Consensus 204 le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~g 283 (466)
T PRK07030 204 MEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLS 283 (466)
T ss_pred HHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeee
Confidence 666664 5788999997 4666677653 89999999999999999999753 2 222222345444444589
Q ss_pred ccccCCCCceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHHh
Q 022194 200 KFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 200 K~~~g~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~ 270 (301)
|.++|. -+..|.++++++ +.+.+.. ..+..+.+.++..++++...++.+.+ ..++..+..+++.+.|++
T Consensus 284 Kgl~gG-~~Pi~av~~~~e-i~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~ 361 (466)
T PRK07030 284 KALTGG-YLPLAAVLTTDT-VYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAH 361 (466)
T ss_pred hhccCC-cccceEEEecHH-HHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 999652 124677777654 4443321 12333445678888888777776632 345555555666666654
Q ss_pred ---CCCcceEecCC
Q 022194 271 ---HPRVKKVNYAG 281 (301)
Q Consensus 271 ---~~~v~~v~~p~ 281 (301)
++.+..++..|
T Consensus 362 l~~~~~v~~vrG~G 375 (466)
T PRK07030 362 LADHPHVAEVRQTG 375 (466)
T ss_pred HhcCCCEEEeEece
Confidence 45554454443
No 341
>PRK07481 hypothetical protein; Provisional
Probab=99.52 E-value=9.1e-13 Score=119.50 Aligned_cols=266 Identities=16% Similarity=0.103 Sum_probs=154.6
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcccc-CCCCchHHHHHHHHHhhcC---CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLDK---ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~ 84 (301)
.+++||.++ +.-+|..++.+..+.. .+.+ ........ ...++...++.+.|.++++ .+.+.+++||++|+.
T Consensus 42 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~ql~--~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve 118 (449)
T PRK07481 42 KKLLDGVGGLWNVNVGHNREEVKEAIV-RQLD--ELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVE 118 (449)
T ss_pred CEEEECchhHHhhcCCCCCHHHHHHHH-HHHH--hccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHH
Confidence 468888532 3458887766654432 2211 11111111 1245668889999998873 456788899999986
Q ss_pred HHHhccC--------C-CCeEEEcCCCCccHHHHHhhhcc-----------cCCcEEEEec------C--CCHHH-----
Q 022194 85 AVTHLLG--------T-GEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVN------T--CDLDE----- 131 (301)
Q Consensus 85 ~~~~~~~--------~-g~~Vlv~~~~y~~~~~~~~~~~~-----------~~g~~~~~~~------~--~d~~~----- 131 (301)
+.+++.+ + ..+|+.....||+.......+.. ..|+.....+ . .|.+.
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~ 198 (449)
T PRK07481 119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC 198 (449)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence 4444321 2 35799999999996532111110 0122211111 1 13333
Q ss_pred ---HHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEe
Q 022194 132 ---VASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMH 196 (301)
Q Consensus 132 ---l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~ 196 (301)
+++.+. +++.+|+++......|.+.+ +++|.++|++||+++|.||++... ... .....+....+.
T Consensus 199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv 278 (449)
T PRK07481 199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIM 278 (449)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEE
Confidence 333332 57899999988877777654 899999999999999999997532 221 222344444445
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEF 267 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~ 267 (301)
+++|.++|. -+..|.++++++ +.+.+.. ..+..+.+-++..++++++.++.+. ...++..+..+++.+.
T Consensus 279 ~~gKgl~gG-~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~ 356 (449)
T PRK07481 279 CLAKGITSG-YVPLGATMVNAR-IADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEG 356 (449)
T ss_pred EEeecccCC-CcCceEEEEcHH-HHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 589999652 124677777654 5454332 1223344557888888877777653 2345555666666666
Q ss_pred HHh----CCCcceEecCC
Q 022194 268 LAS----HPRVKKVNYAG 281 (301)
Q Consensus 268 l~~----~~~v~~v~~p~ 281 (301)
|++ ++.+..++..|
T Consensus 357 L~~l~~~~~~i~~vrG~G 374 (449)
T PRK07481 357 LQPLKERFELVGDVRGKG 374 (449)
T ss_pred HHHHhhcCCCeEEEeecc
Confidence 654 45455555444
No 342
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.52 E-value=2.9e-13 Score=119.35 Aligned_cols=202 Identities=15% Similarity=0.115 Sum_probs=137.5
Q ss_pred HHHHHHHHHhhcCC-C--ceEEe-cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 57 RDALESLLAKLDKA-D--RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~-~--~~i~~-~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+++++.++++++. + +++++ ++|+.++. ++..++.+|+++++......+.. |..+++..|.. ..+..+
T Consensus 50 ~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~~g 126 (360)
T PRK05355 50 AEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSEDDG 126 (360)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccccC
Confidence 78888999999996 3 34555 44467785 77889999999887665544443 34677777754 333221
Q ss_pred --CHHHHHh-hcCCCceEEEEeCCCCCccccc-cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEeccccccc
Q 022194 128 --DLDEVAS-AIGPWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 --d~~~l~~-~l~~~~~~v~i~~~~np~G~~~-~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~ 203 (301)
+..++++ .+++++++|.+++..++||... |+++| +|+++++|.+.+.+...-..+ ..|++++|.+|++
T Consensus 127 ~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~-~~d~~~~ssqK~l- 198 (360)
T PRK05355 127 FTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVS-KFGLIYAGAQKNI- 198 (360)
T ss_pred CCCCCChhhccCCCCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHH-HccEEEEeccccc-
Confidence 2334444 7777899999999999999998 77776 899999999999887653322 2469999999999
Q ss_pred CCCCceeeEEEEcchhHHHHHHH-----------hh-hhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAKELYF-----------LQ-NAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIA 265 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~ 265 (301)
||+|+ |+++.+++.+.+ +.. .. .....+.+....+++.++++. ++.+.++..+.+++++
T Consensus 199 gP~Gl--g~l~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~ 275 (360)
T PRK05355 199 GPAGL--TIVIVREDLLGR-ALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLY 275 (360)
T ss_pred cCCce--EEEEECHHHHhh-cccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 59884 888888765422 211 01 111234444444444444443 4556677777888888
Q ss_pred HHHHhCC
Q 022194 266 EFLASHP 272 (301)
Q Consensus 266 ~~l~~~~ 272 (301)
+.|++++
T Consensus 276 ~~l~~~~ 282 (360)
T PRK05355 276 DAIDSSD 282 (360)
T ss_pred HHHHhCC
Confidence 8888765
No 343
>PRK07483 hypothetical protein; Provisional
Probab=99.52 E-value=4.6e-13 Score=121.12 Aligned_cols=266 Identities=14% Similarity=0.112 Sum_probs=156.2
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
..++||.++ +.-+|..++.+..+.. .+.+ .........+.++...++.+.|.+... .+.+.+++||++|+.+.
T Consensus 30 ~~ylD~~~g~~~~~lGh~~p~v~~av~-~ql~--~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~A 106 (443)
T PRK07483 30 KRYLDASGGAAVSCLGHSHPRVIAAIH-AQID--RLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAA 106 (443)
T ss_pred CEEEEcCccHhhhccCCCCHHHHHHHH-HHHH--hccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHH
Confidence 478898644 5558887766665432 2211 111111112345667889999988763 46788889999998543
Q ss_pred Hhc---c------CCCCeEEEcCCCCccHHHHHhhhcc------cCC---cEEEEecC----CC--------------HH
Q 022194 87 THL---L------GTGEEIVAGDDLYGGTDRLLSRVTP------KTG---VVVKRVNT----CD--------------LD 130 (301)
Q Consensus 87 ~~~---~------~~g~~Vlv~~~~y~~~~~~~~~~~~------~~g---~~~~~~~~----~d--------------~~ 130 (301)
+.+ . ....+|+.....||+.......+.. ..+ ..+..++. .+ ++
T Consensus 107 lklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (443)
T PRK07483 107 LKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLAD 186 (443)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHH
Confidence 332 2 1235788889999988532211110 000 01112221 11 24
Q ss_pred HHHhhcC----CCceEEEEeCCCCC-cccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccc---cCccCCCCcEEEec
Q 022194 131 EVASAIG----PWTKLVWVESPTNP-RQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVL---SRPLELGADIVMHS 197 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np-~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~---~~~~~~~~di~~~S 197 (301)
++++.+. +++.+|+++..... .|.+.+ +++|.++|++||+++|+||++.. |.. ......+....+.+
T Consensus 187 ~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 266 (443)
T PRK07483 187 ELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT 266 (443)
T ss_pred HHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee
Confidence 5665553 57889999987653 466653 89999999999999999999753 222 22223344444555
Q ss_pred ccccccCCCCc-eeeEEEEcchhHHHHHHHh----hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHH-
Q 022194 198 ATKFIAGHSDV-MAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA- 269 (301)
Q Consensus 198 ~sK~~~g~~g~-~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~- 269 (301)
++|.++| |+ ..|.++.+++ +.+.+... .+.++.+-++..++++++.++.+. ...++..+..+++++.|+
T Consensus 267 ~gK~l~g--G~~Pi~av~~~~~-i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~ 343 (443)
T PRK07483 267 IAKGLGA--GYQPIGAVLASDR-IYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRE 343 (443)
T ss_pred ehhhhcc--CccccEEEEEcHH-HHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 8999965 33 4677777654 44443321 233445567777777777777653 234555555566666664
Q ss_pred ---hCCCcceEecCCC
Q 022194 270 ---SHPRVKKVNYAGL 282 (301)
Q Consensus 270 ---~~~~v~~v~~p~~ 282 (301)
+++.+..++.-|+
T Consensus 344 l~~~~~~i~~vRG~Gl 359 (443)
T PRK07483 344 RLGQHPHVGDIRGRGL 359 (443)
T ss_pred HHhcCCCeeeEeeccc
Confidence 3565656666554
No 344
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.51 E-value=9.3e-13 Score=119.73 Aligned_cols=267 Identities=14% Similarity=0.135 Sum_probs=151.2
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-------CCceEEecchHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-------ADRALCFTSGMA 81 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~-------~~~~i~~~sG~~ 81 (301)
.++|||.++ +.-+|..++.+..+.. .+.+.. .......+.++...++.+.|.+.+. .+.+.+.+||++
T Consensus 64 ~~ylD~~~g~~~~~lGh~~p~i~~Ai~-~q~~~l--~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSE 140 (472)
T PRK08742 64 RRYLDAVSSWWTNLFGHAEPRIGAAIA-AQAGEL--EQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSA 140 (472)
T ss_pred CEEEEcCccHHhccCCCCCHHHHHHHH-HHHHhC--CCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchH
Confidence 368888644 4457887666554432 221100 1111111245567888888888763 347888899999
Q ss_pred HHHHHHhcc---------CCCCeEEEcCCCCccHHHHHhhhcccC------C---cEEEEecCC----------------
Q 022194 82 ALAAVTHLL---------GTGEEIVAGDDLYGGTDRLLSRVTPKT------G---VVVKRVNTC---------------- 127 (301)
Q Consensus 82 ai~~~~~~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~~~------g---~~~~~~~~~---------------- 127 (301)
|+.+.+.+. ....+|+.....||+............ + ..+..++..
T Consensus 141 AvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~ 220 (472)
T PRK08742 141 GVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYAL 220 (472)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHH
Confidence 986443332 124679999999999753321111000 0 011122211
Q ss_pred -CHHHHHhhcC---CCceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-c---cccCccCCCCcEE
Q 022194 128 -DLDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-P---VLSRPLELGADIV 194 (301)
Q Consensus 128 -d~~~l~~~l~---~~~~~v~i~~-~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~---~~~~~~~~~~di~ 194 (301)
+++.+++.+. +++.+|+++. .....|.+.+ +++|.++|++||+++|.||++.. | .+......|....
T Consensus 221 ~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PD 300 (472)
T PRK08742 221 QAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPD 300 (472)
T ss_pred HHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCC
Confidence 1455666663 5788999987 4666676643 89999999999999999999753 2 2222233455555
Q ss_pred EecccccccCCCCceeeEEEEcchhHHHHHHH------hhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHH
Q 022194 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELYF------LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAE 266 (301)
Q Consensus 195 ~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~ 266 (301)
+.+++|.++|. -+..+.++++++ +.+.+.. ..+..+.+-++..++++++.++.+.+ ..++..+..+++.+
T Consensus 301 iv~~gKgl~gG-~~Plaav~~~~e-i~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~ 378 (472)
T PRK08742 301 LLCLSKGLTGG-FLPLSAVLATQQ-LYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQ 378 (472)
T ss_pred EEEEcccccCC-CCCcceeeccHH-HHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 55589999653 124577776644 4443321 11223344577778787777766532 22333333333333
Q ss_pred ---HHHhCCCcceEecCCC
Q 022194 267 ---FLASHPRVKKVNYAGL 282 (301)
Q Consensus 267 ---~l~~~~~v~~v~~p~~ 282 (301)
.+++++.|..++.-|+
T Consensus 379 ~~~~~~~~~~i~dvRG~Gl 397 (472)
T PRK08742 379 LAAQIGEHPHVADVRQAGM 397 (472)
T ss_pred HHHHHhcCCCeeeEeccce
Confidence 3344665656655544
No 345
>PRK06917 hypothetical protein; Provisional
Probab=99.50 E-value=2e-12 Score=117.12 Aligned_cols=264 Identities=13% Similarity=0.092 Sum_probs=155.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcccc-CCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~ 85 (301)
..+|||.++ +.-+|..++.+..+.. .+.+ . ..+.+. .+..+...++.+.|.+.+.. +.+++++||++|+.+
T Consensus 31 ~~ylD~~~g~~~~~lGh~hp~v~~Ai~-~ql~--~-~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 106 (447)
T PRK06917 31 NKYFDGSSGAVTAGIGHGVKEIADAIK-EQAE--E-VSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANET 106 (447)
T ss_pred CEEEECchhHHhccCCCCCHHHHHHHH-HHHh--h-CcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHH
Confidence 478888633 3448887766665532 2211 1 122221 23456688899999988743 467788999999865
Q ss_pred HHhcc---------CCCCeEEEcCCCCccHHHHHhhhcccC-----------CcEEEEecC---------------CCHH
Q 022194 86 VTHLL---------GTGEEIVAGDDLYGGTDRLLSRVTPKT-----------GVVVKRVNT---------------CDLD 130 (301)
Q Consensus 86 ~~~~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~~~-----------g~~~~~~~~---------------~d~~ 130 (301)
.+++. ..+.+|+.....||+............ +......+. .+++
T Consensus 107 AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 186 (447)
T PRK06917 107 AMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACAT 186 (447)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHH
Confidence 44443 224679999999999764322211100 111111110 0235
Q ss_pred HHHhhcC----CCceEEEEeCCCCCc-ccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccC---ccCCCCcEEEec
Q 022194 131 EVASAIG----PWTKLVWVESPTNPR-QQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSR---PLELGADIVMHS 197 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~-G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~---~~~~~~di~~~S 197 (301)
.+++.++ +++.+|+++...... |.+.+ +++|.++|++||+++|+||++... .... ....+....+.+
T Consensus 187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~ 266 (447)
T PRK06917 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT 266 (447)
T ss_pred HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE
Confidence 5666664 468899999776544 45443 899999999999999999997632 2211 122344444456
Q ss_pred ccccccCCCCc-eeeEEEEcchhHHHHHHHh----hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 198 ATKFIAGHSDV-MAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 198 ~sK~~~g~~g~-~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
++|.+++ |+ ..+.+++++ .+.+.+... .+..+...++..++++++.++.+. +..++..+..++|++.|++
T Consensus 267 ~gK~l~~--G~~Pi~a~~~~~-~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~ 343 (447)
T PRK06917 267 LGKGLGA--GYTPIAATVVSD-RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQK 343 (447)
T ss_pred eeehhcc--CCcceEEEEEcH-HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 8999965 32 467777764 454543321 122344567888888877777653 3445666666666666654
Q ss_pred ----CCCcceEecCC
Q 022194 271 ----HPRVKKVNYAG 281 (301)
Q Consensus 271 ----~~~v~~v~~p~ 281 (301)
++.+..++..|
T Consensus 344 l~~~~~~i~~vrG~G 358 (447)
T PRK06917 344 VQQQSTIIGDVRGKG 358 (447)
T ss_pred HHhcCCCEEEEeecc
Confidence 44444444433
No 346
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=3.6e-12 Score=104.51 Aligned_cols=180 Identities=21% Similarity=0.303 Sum_probs=118.3
Q ss_pred HHHHHHHHHhhcCCC---ceEEecchH-HHH-HHHHhcc---CCCC--eEEE-cCCCCccHHHHHhhhcccCCcEEE---
Q 022194 57 RDALESLLAKLDKAD---RALCFTSGM-AAL-AAVTHLL---GTGE--EIVA-GDDLYGGTDRLLSRVTPKTGVVVK--- 122 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG~-~ai-~~~~~~~---~~g~--~Vlv-~~~~y~~~~~~~~~~~~~~g~~~~--- 122 (301)
.+.+.+.+.+.+|.+ +.+.+|+|+ .+. +++-.+. ..|+ +|+. -.|.|-+|- .+.-...+-|.
T Consensus 80 i~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~----d~~l~~d~fVs~kP 155 (417)
T COG3977 80 IDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYA----DAGLEEDLFVSAKP 155 (417)
T ss_pred HHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccc----ccccCccceeeccC
Confidence 777888888888764 678888887 444 3433332 2232 4544 357777774 22111111111
Q ss_pred ---EecC------CCHHHHHhhcCCCceEEEEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCcccc------
Q 022194 123 ---RVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS------ 184 (301)
Q Consensus 123 ---~~~~------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~------ 184 (301)
.++. .|++++. +.+++.+|+++-|.||||.+. ++.+|..+|++||+++++|.+|+.+...
T Consensus 156 ~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~ 233 (417)
T COG3977 156 NIELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDA 233 (417)
T ss_pred CcccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccc
Confidence 1111 1566553 347899999999999999995 5888999999999999999999975432
Q ss_pred CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh---hcCCCCCHHhHHHHHc
Q 022194 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---AEGSGLAPFDCWICLR 245 (301)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 245 (301)
.+....+.+.|.|+||. |.+|.|.|++++++ .+.+.+..... .......+..+..+++
T Consensus 234 ~~~w~~NiilC~SLSK~--GLPG~R~GIiIane-~viqaitnmn~iisLap~~~G~Aia~~mie 294 (417)
T COG3977 234 TPLWNENIILCMSLSKL--GLPGSRCGIIIANE-KVIQAITNMNGIISLAPGRMGPAIAAEMIE 294 (417)
T ss_pred cccCCCCEEEEeehhhc--CCCCcceeEEEccH-HHHHHHHhccceeeecCCCccHHHHHHHhh
Confidence 24455678999999997 77889999999875 55565554432 3334455554444433
No 347
>PRK06149 hypothetical protein; Provisional
Probab=99.50 E-value=1.1e-12 Score=129.19 Aligned_cols=264 Identities=17% Similarity=0.135 Sum_probs=156.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc--CCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD--KADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~--~~~~~i~~~sG~~ai~~~~~ 88 (301)
.+++||.++..-+|..++.+..+. ..+.. ... ..+++..+...++.+.|++.+ +.+.+++++||++|+.+.++
T Consensus 585 ~~ylD~~~~~~~lGh~hp~v~~Ai-~~q~~--~l~--~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~Alk 659 (972)
T PRK06149 585 RSYLDMVNNVTVLGHGHPRLAAAA-ARQWS--LLN--TNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIR 659 (972)
T ss_pred CEEEECCCCccccCCCCHHHHHHH-HHHHH--hcc--ccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHH
Confidence 578999743333676655544433 22211 111 122334566888999999987 45688899999999864444
Q ss_pred c---cCCCCeEEEcCCCCccHHHHHhhhcc----c--------CCcEEEEec------C--CC-----HHHHHhhc----
Q 022194 89 L---LGTGEEIVAGDDLYGGTDRLLSRVTP----K--------TGVVVKRVN------T--CD-----LDEVASAI---- 136 (301)
Q Consensus 89 ~---~~~g~~Vlv~~~~y~~~~~~~~~~~~----~--------~g~~~~~~~------~--~d-----~~~l~~~l---- 136 (301)
+ ...+++|+..+..||+.......+.. . .++.....+ . ++ .+++++.+
T Consensus 660 lAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 739 (972)
T PRK06149 660 LAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELD 739 (972)
T ss_pred HHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHh
Confidence 2 33456788889999976422101100 0 011111111 0 11 23333332
Q ss_pred --CCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCc-CCccccC----ccCCCCcEEEecccccccCC
Q 022194 137 --GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLSR----PLELGADIVMHSATKFIAGH 205 (301)
Q Consensus 137 --~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~-~~~~~~~----~~~~~~di~~~S~sK~~~g~ 205 (301)
.+++.+|+++......|.+.+ +++|.++|++||+++|+||++ +.|..+. ....|....+.+++|.+++
T Consensus 740 ~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~- 818 (972)
T PRK06149 740 ASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGN- 818 (972)
T ss_pred hcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccC-
Confidence 146889999988877788876 999999999999999999998 4444332 1123444444479999965
Q ss_pred CCceeeEEEEcchhHHHHHHH-hhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHHh----CCCcceEe
Q 022194 206 SDVMAGVLAVKGERLAKELYF-LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVN 278 (301)
Q Consensus 206 ~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~----~~~v~~v~ 278 (301)
|+..|++++++ .+.+.+.. ....++.+.++..++++++.++.+.+ ..++..+..+++++.|++ ++.+..++
T Consensus 819 -G~Pl~av~~~~-~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr 896 (972)
T PRK06149 819 -GHPLGAVITRR-EIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVH 896 (972)
T ss_pred -CeeeEEEEEcH-HHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe
Confidence 35678888875 44444332 11223456688888888888877642 234444444666666653 56555565
Q ss_pred cCCC
Q 022194 279 YAGL 282 (301)
Q Consensus 279 ~p~~ 282 (301)
.-|+
T Consensus 897 G~Gl 900 (972)
T PRK06149 897 GMGL 900 (972)
T ss_pred ecce
Confidence 4444
No 348
>PRK07480 putative aminotransferase; Validated
Probab=99.49 E-value=1.6e-12 Score=117.95 Aligned_cols=267 Identities=16% Similarity=0.156 Sum_probs=153.2
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCc-cccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPY-DYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~-~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~ 85 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ ..... .+..+.++...++.+.|.+.+. .+.+.+++||++|+.+
T Consensus 50 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~q~~--~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~ 126 (456)
T PRK07480 50 NKILDGMAGLWCVNVGYGRKELADAAA-RQMR--ELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDT 126 (456)
T ss_pred CEEEEccchHHHhcCCCCCHHHHHHHH-HHHH--hcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence 367787532 2337777666555432 2211 11111 1111245668889999998874 3578889999999864
Q ss_pred HHhccC--------C-CCeEEEcCCCCccHHHHHhhhc------ccCCc---EEEEecCC---------------C--HH
Q 022194 86 VTHLLG--------T-GEEIVAGDDLYGGTDRLLSRVT------PKTGV---VVKRVNTC---------------D--LD 130 (301)
Q Consensus 86 ~~~~~~--------~-g~~Vlv~~~~y~~~~~~~~~~~------~~~g~---~~~~~~~~---------------d--~~ 130 (301)
.+.+.+ + ..+|+.....||+......... ...+. .+..++.. + .+
T Consensus 127 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 206 (456)
T PRK07480 127 VLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAAR 206 (456)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHH
Confidence 433221 2 3578888889998642210110 00010 11112210 1 24
Q ss_pred HHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-Ccccc---CccCCCCcEEEecc
Q 022194 131 EVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSA 198 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~---~~~~~~~di~~~S~ 198 (301)
.+++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||++. .|-.+ .....|....+.++
T Consensus 207 ~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~ 286 (456)
T PRK07480 207 QLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTI 286 (456)
T ss_pred HHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeee
Confidence 5554442 57889999988877777754 9999999999999999999985 32222 22234554455669
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHH----hhhhcCCCCCHHhHHHHHcccccHHH--HHHHH-HHHHHHHHHHHHh-
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYF----LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQ-QDNAQKIAEFLAS- 270 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~-~~~~~~l~~~l~~- 270 (301)
+|.++|. -+..|.+++++ .+.+.+.. ..+..+.+.++..++++++.++.+.+ ..++. .+..+++.+.|++
T Consensus 287 gK~l~gG-~~Pi~av~~~~-~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l 364 (456)
T PRK07480 287 AKGLTSG-YIPMGAVGVGD-RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL 364 (456)
T ss_pred ehhhccC-CccceEEEEcH-HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999652 12356666664 45454321 12334556678888888888776632 33444 2445555555543
Q ss_pred --CCCcceEecCCC
Q 022194 271 --HPRVKKVNYAGL 282 (301)
Q Consensus 271 --~~~v~~v~~p~~ 282 (301)
++.+..++..|+
T Consensus 365 ~~~~~i~~vrG~Gl 378 (456)
T PRK07480 365 ADHPLVGEVRGVGL 378 (456)
T ss_pred hcCCCeeeEEeecc
Confidence 555555554443
No 349
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=6.1e-13 Score=120.90 Aligned_cols=267 Identities=13% Similarity=0.100 Sum_probs=153.8
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~ 86 (301)
..++||.++ +.-+|..++.+..+.. .+.+ .........+.++...++.+.|.+++.. +.+.+++||++|+.+.
T Consensus 56 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~ql~--~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~A 132 (460)
T PRK06916 56 NEYYDGVSSIWLNVHGHQVPELDEAIR-EQLN--KIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIA 132 (460)
T ss_pred CEEEEcchhHHHhhcCCCCHHHHHHHH-HHHH--hCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHH
Confidence 367777533 3346766655544332 2211 1010111112455678888999888743 5788889999998644
Q ss_pred HhccC--------C-CCeEEEcCCCCccHHHHHhhhccc-----------CCcEEEEecC---------------CCHHH
Q 022194 87 THLLG--------T-GEEIVAGDDLYGGTDRLLSRVTPK-----------TGVVVKRVNT---------------CDLDE 131 (301)
Q Consensus 87 ~~~~~--------~-g~~Vlv~~~~y~~~~~~~~~~~~~-----------~g~~~~~~~~---------------~d~~~ 131 (301)
+.+.+ + +.+|+.....||+.......+... .+......+. .+++.
T Consensus 133 lklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~ 212 (460)
T PRK06916 133 IKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEE 212 (460)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHH
Confidence 44321 2 468999999999975332111110 1111111110 12455
Q ss_pred HHhhcC---CCceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-cccc---CccCCCCcEEEeccc
Q 022194 132 VASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIVMHSAT 199 (301)
Q Consensus 132 l~~~l~---~~~~~v~i~~-~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~---~~~~~~~di~~~S~s 199 (301)
+++.++ +++.+|+++. +....|.+.+ +++|.++|++||+++|+||++.. |..+ .....+....+.+++
T Consensus 213 l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~g 292 (460)
T PRK06916 213 LEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAG 292 (460)
T ss_pred HHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeee
Confidence 666664 5789999998 5776677643 89999999999999999999753 2222 122234434444589
Q ss_pred ccccCCCCceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 200 KFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 200 K~~~g~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
|.++|. -+..|.++++++ +.+.+.. ..+..+.+.++..+++++..++.+. ...++..++.+++.+.|++
T Consensus 293 K~l~gG-~~Pi~av~~~~e-i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~ 370 (460)
T PRK06916 293 KGLTGG-YLPIAITVTTDE-IYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLED 370 (460)
T ss_pred hhhhcC-ccccceeeecHH-HHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 999652 134677777754 4443321 1122334457777777777776653 3456666666677777664
Q ss_pred ---CCCcceEecCCC
Q 022194 271 ---HPRVKKVNYAGL 282 (301)
Q Consensus 271 ---~~~v~~v~~p~~ 282 (301)
++.+..++.-|+
T Consensus 371 l~~~~~v~~vrG~Gl 385 (460)
T PRK06916 371 LFALKHVGDIRQLGL 385 (460)
T ss_pred hhcCCCeEEeecCCc
Confidence 444444554443
No 350
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.49 E-value=2.1e-12 Score=107.12 Aligned_cols=214 Identities=19% Similarity=0.200 Sum_probs=145.7
Q ss_pred HHHHHHHHHhhcCCC-ceEEecchH-HHHH-HHHhccC--CCCeEEEcCCCCccHHH-HHhhhcccCCcEEEEecCCCHH
Q 022194 57 RDALESLLAKLDKAD-RALCFTSGM-AALA-AVTHLLG--TGEEIVAGDDLYGGTDR-LLSRVTPKTGVVVKRVNTCDLD 130 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG~-~ai~-~~~~~~~--~g~~Vlv~~~~y~~~~~-~~~~~~~~~g~~~~~~~~~d~~ 130 (301)
-+.+-++++.+.|+. +.++++.++ -.+. .+.+.++ +|+.|++++..-.++.. ..+..+...+.....--.+.++
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~ 157 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPR 157 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChH
Confidence 467788899999886 445555554 4453 5555544 48899998875544432 2344555554432222234678
Q ss_pred HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCcc-CCCCcEEEecccccccCCCCce
Q 022194 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFIAGHSDVM 209 (301)
Q Consensus 131 ~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~-~~~~di~~~S~sK~~~g~~g~~ 209 (301)
++++++.+++.+|++++.++-||...++.+|..++|++|++++.|=+|+.|..+-.+ ..|+|+.+.+..|++.|.||-.
T Consensus 158 ~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGap 237 (407)
T COG3844 158 ALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAP 237 (407)
T ss_pred HHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCc
Confidence 999999999999999999999999999999999999999999999999999987544 5589999999999999988875
Q ss_pred eeEEEEcchhHHHHHHHhh----------------hhcC-----CCCCH-HhHHHHHccccc-----HHHHHHHHHHHHH
Q 022194 210 AGVLAVKGERLAKELYFLQ----------------NAEG-----SGLAP-FDCWICLRGVKT-----MALRVEKQQDNAQ 262 (301)
Q Consensus 210 ~g~~~~~~~~~~~~~~~~~----------------~~~~-----~~~~~-~~~~~~~~~l~~-----~~~~~~~~~~~~~ 262 (301)
++..+. ++.......... ...+ ++..+ .+..++..+++. +.+.+++......
T Consensus 238 a~l~v~-~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd 316 (407)
T COG3844 238 AGLFVA-PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTD 316 (407)
T ss_pred eeEEec-cccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHH
Confidence 555444 332211110000 0011 22222 223333334443 5777788888888
Q ss_pred HHHHHHHhC
Q 022194 263 KIAEFLASH 271 (301)
Q Consensus 263 ~l~~~l~~~ 271 (301)
++.+.++.+
T Consensus 317 ~fieLvEa~ 325 (407)
T COG3844 317 YFIELVEAR 325 (407)
T ss_pred HHHHHHHhc
Confidence 888888764
No 351
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.48 E-value=1.2e-12 Score=115.08 Aligned_cols=202 Identities=14% Similarity=0.075 Sum_probs=137.9
Q ss_pred HHHHHHHHHhhcCCC---ceEE-ecchHHHHH-HHHhcc-CCCCeEEEcCCCCccHHHHHh-hhcccCCc-EEEEecCC-
Q 022194 57 RDALESLLAKLDKAD---RALC-FTSGMAALA-AVTHLL-GTGEEIVAGDDLYGGTDRLLS-RVTPKTGV-VVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~-~~sG~~ai~-~~~~~~-~~g~~Vlv~~~~y~~~~~~~~-~~~~~~g~-~~~~~~~~- 127 (301)
..++.+.|.++++.+ ++++ .+|||.++. ++..++ ++|++|++.. .| -.-|. .+++..|+ ++..+...
T Consensus 41 ~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~F---G~r~~~eia~~~g~~~v~~l~~~~ 116 (374)
T TIGR01365 41 LAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SF---GKGWVTDVTKQLKLPDVRVLEAEY 116 (374)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HH---HHHHHHHHHHhcCCCCcEEEcCCC
Confidence 678888999999864 2344 567788885 677788 5888898753 22 22233 77777887 35555533
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEeccccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~ 203 (301)
++++++. + +.|++++..++||...|++++++.. +++++|+|.+.+.+...-..+ ++|+++.|.+|+++
T Consensus 117 g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d-~iDv~~tgsQK~L~ 188 (374)
T TIGR01365 117 GKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH-KLDVVTFSWQKVLG 188 (374)
T ss_pred CCCCCHHHcCC--C---CCEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh-HCcEEEEechhccC
Confidence 6777763 1 2367888999999999998766432 589999999999887664444 59999999999999
Q ss_pred CCCCceeeEEEEcchhHHHHHH--------H-h------------h-hhcCCCCCHHhHHHHHcccc------cHHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAKELY--------F-L------------Q-NAEGSGLAPFDCWICLRGVK------TMALRVE 255 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~--------~-~------------~-~~~~~~~~~~~~~~~~~~l~------~~~~~~~ 255 (301)
+|||+ ++++.+++.+.+.-. . . . ....++.+....+++...++ -++.+.+
T Consensus 189 ~ppGl--s~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~ 266 (374)
T TIGR01365 189 GEGAH--GMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIA 266 (374)
T ss_pred CCCce--EEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 99985 888888766533110 0 0 0 01112233333444444442 2677888
Q ss_pred HHHHHHHHHHHHHHhCC
Q 022194 256 KQQDNAQKIAEFLASHP 272 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~~ 272 (301)
++.++++.+++++++..
T Consensus 267 Rh~~~a~~l~~~l~~lg 283 (374)
T TIGR01365 267 RADDNLAVLEAFVAKNN 283 (374)
T ss_pred HHHHHHHHHHHHHHHCC
Confidence 89999999999998764
No 352
>PRK07036 hypothetical protein; Provisional
Probab=99.48 E-value=2.6e-12 Score=116.88 Aligned_cols=265 Identities=17% Similarity=0.168 Sum_probs=153.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcc--ccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYD--YTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~--y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
.+++||.++ +.-+|..++.+..+.. .+.. . ..+. +....++...++.+.|.+... .+.+.+++||++|+.
T Consensus 51 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~q~~--~-~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve 126 (466)
T PRK07036 51 RRYLDGIGGMWCVNVGYGREEMADAIA-DQAR--R-LPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVD 126 (466)
T ss_pred CEEEECcccHHhhcCCCCCHHHHHHHH-HHHH--h-CcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence 367777532 2337776555544432 2211 1 1111 111234557888888888763 356788899999986
Q ss_pred HHHhcc---------CCCCeEEEcCCCCccHHHHHhhhcccC---------CcEEEEecCCC-----------------H
Q 022194 85 AVTHLL---------GTGEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCD-----------------L 129 (301)
Q Consensus 85 ~~~~~~---------~~g~~Vlv~~~~y~~~~~~~~~~~~~~---------g~~~~~~~~~d-----------------~ 129 (301)
+.+++. ....+|+.....||+.......+.... ...+..++..+ .
T Consensus 127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 206 (466)
T PRK07036 127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV 206 (466)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence 444432 113678988999999753221111110 00112221111 2
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-Ccccc---Ccc-CCCCcEEEe
Q 022194 130 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPL-ELGADIVMH 196 (301)
Q Consensus 130 ~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~---~~~-~~~~di~~~ 196 (301)
+.+++.+. +++.+|+++......|...+ +++|.++|++||+++|+||++. .|..+ ... ..|....+.
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDiv 286 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDII 286 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEE
Confidence 33444442 57889999988877788765 9999999999999999999985 33322 222 235444455
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEF 267 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~ 267 (301)
+++|.++|. -+..|.+++++ .+.+.+.. ..+..+.+.++..+++++..++.+. +..++..+..+++++.
T Consensus 287 t~gK~l~gG-~~Pi~av~~~~-~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~ 364 (466)
T PRK07036 287 TFAKGLTSG-YQPLGAVIISE-RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEER 364 (466)
T ss_pred EEccccccC-ccccEEEEEcH-HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 689999652 12357777764 45454331 1222344567888888888777663 3445666666666666
Q ss_pred HHh---CCCcceEecCC
Q 022194 268 LAS---HPRVKKVNYAG 281 (301)
Q Consensus 268 l~~---~~~v~~v~~p~ 281 (301)
|+. ++.+..++..|
T Consensus 365 L~~l~~~~~v~~vrG~G 381 (466)
T PRK07036 365 LASLRELPLVGDVRGDH 381 (466)
T ss_pred HHHhccCCCEEEEEeec
Confidence 654 45454454443
No 353
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.48 E-value=2.2e-12 Score=116.37 Aligned_cols=252 Identities=12% Similarity=0.039 Sum_probs=144.4
Q ss_pred ceeeecCC--CCCCCCccccCeeecceeecCCCCCCCCccc-cCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHH
Q 022194 11 TLLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDY-TRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~--~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y-~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~ 85 (301)
.+++||.+ .+.++|..++. +..+...+.+ ...+.. ....++...++.+.+.+++.. +.+.+++||++|+..
T Consensus 45 ~~ylD~~~g~~~~~lGh~~p~-v~~ai~~~~~---~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~ 120 (427)
T TIGR00508 45 RRLIDGMSSWWAAIHGYNHPR-LNAAAQKQID---KMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEV 120 (427)
T ss_pred CEEEEccchHHHhcCCCCCHH-HHHHHHHHHH---hcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHH
Confidence 46888862 23378855444 4433222211 111111 112345577788888887743 478888999998853
Q ss_pred HHhccC--------C-CCeEEEcCCCCccHHHHHhhhccc------------CCcEEEEec---------CCCHHHHHhh
Q 022194 86 VTHLLG--------T-GEEIVAGDDLYGGTDRLLSRVTPK------------TGVVVKRVN---------TCDLDEVASA 135 (301)
Q Consensus 86 ~~~~~~--------~-g~~Vlv~~~~y~~~~~~~~~~~~~------------~g~~~~~~~---------~~d~~~l~~~ 135 (301)
.+.+.+ + ..+|+.....||+........... .+......+ ..|.+++++.
T Consensus 121 AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~ 200 (427)
T TIGR00508 121 ALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKL 200 (427)
T ss_pred HHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHH
Confidence 333211 2 367999999999875322111110 000011111 1145566666
Q ss_pred cC---CCceEEEEeCC-CCCccccc----cHHHHHHHHHHcCCEEEEeCCcCC-cccc---CccCC--CCcEEEeccccc
Q 022194 136 IG---PWTKLVWVESP-TNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLEL--GADIVMHSATKF 201 (301)
Q Consensus 136 l~---~~~~~v~i~~~-~np~G~~~----~l~~l~~l~~~~~~~li~D~~~~~-~~~~---~~~~~--~~di~~~S~sK~ 201 (301)
+. +++.+|+++.. ....|... .+++|.++|++||+++|+||++.. |..+ ..... ..|+++ ++|.
T Consensus 201 l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~ 278 (427)
T TIGR00508 201 MELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILC--VGKA 278 (427)
T ss_pred HHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEE--echh
Confidence 64 46778888875 55445433 499999999999999999999842 2211 11122 356555 8999
Q ss_pred ccCCCCc-eeeEEEEcchhHHHHHHHhh-----hhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 202 IAGHSDV-MAGVLAVKGERLAKELYFLQ-----NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 202 ~~g~~g~-~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
++| |+ ..+.++.+ +.+.+.+.... ...+...++..++++++.++.+. +..++..++.+++++.|+++
T Consensus 279 l~g--G~~p~~a~~~~-~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 353 (427)
T TIGR00508 279 LTG--GYMTLSATVTT-DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPL 353 (427)
T ss_pred hhc--CcccceEEEEc-HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 954 43 35666665 44555443211 22334457777777777777553 34567777777888877654
No 354
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.47 E-value=3e-12 Score=116.33 Aligned_cols=265 Identities=17% Similarity=0.119 Sum_probs=152.7
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC----ceEEe-cchHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD----RALCF-TSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~----~~i~~-~sG~~ai 83 (301)
.++|||.++ +--+|..++.+..+.. .+.+ +...+....+.++...++.+.|.+.+... ..+++ +||++|+
T Consensus 58 ~~ylD~~~g~~~~~lGH~~p~v~~Ai~-~q~~--~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAv 134 (459)
T PRK06931 58 NQYLDCLAGAGTLALGHNHPDVLQSIQ-DVLT--SGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAV 134 (459)
T ss_pred CEEEEcccchhhccCCCCCHHHHHHHH-HHHh--hhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHH
Confidence 478888643 3347877666555432 2211 11111111224566788899998887422 24455 7999998
Q ss_pred HHHHhc---cCCCCeEEEcCCCCccHHHHHhhhcccC---------CcEEEEecCC-------------CHHHH----Hh
Q 022194 84 AAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTC-------------DLDEV----AS 134 (301)
Q Consensus 84 ~~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~~---------g~~~~~~~~~-------------d~~~l----~~ 134 (301)
.+.+++ ...+++|+.....||+.......+.... ...+..++.. +.+.+ ++
T Consensus 135 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (459)
T PRK06931 135 EAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFEN 214 (459)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 644443 3345689999999999864432211100 0112222211 12222 22
Q ss_pred hcC------CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-c---cccCccCCCCcEEEecccc
Q 022194 135 AIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-P---VLSRPLELGADIVMHSATK 200 (301)
Q Consensus 135 ~l~------~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~---~~~~~~~~~~di~~~S~sK 200 (301)
.+. +++.+|+++......|.+.+ +++|.++|++||+++|.||++.. | .+......+....+.+++|
T Consensus 215 ~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK 294 (459)
T PRK06931 215 FIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSK 294 (459)
T ss_pred HHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecc
Confidence 322 35889999988776777653 89999999999999999999753 2 2222223454445555899
Q ss_pred cccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHH----hCCCc
Q 022194 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRV 274 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~----~~~~v 274 (301)
.++| |+..|.++.+++ + +.+....+..+.+-++..++++++.++.+.+ ..++..+..+++.+.|+ ++|.+
T Consensus 295 ~l~g--G~Pi~av~~~~~-~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i 370 (459)
T PRK06931 295 AVGG--GLPLAVLGIKKE-F-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCI 370 (459)
T ss_pred cccC--CcceeeeeeHHH-H-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9965 356777776643 3 3322222333455677888887777776532 33444555555555554 35655
Q ss_pred ceEecCCC
Q 022194 275 KKVNYAGL 282 (301)
Q Consensus 275 ~~v~~p~~ 282 (301)
..++..|+
T Consensus 371 ~~vrG~Gl 378 (459)
T PRK06931 371 GNVRGRGL 378 (459)
T ss_pred EeEecCce
Confidence 55655554
No 355
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=1.2e-13 Score=116.72 Aligned_cols=247 Identities=16% Similarity=0.188 Sum_probs=174.7
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC------CCch-HHHHHHHHHhhcCCCceEEecchHHHH-
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS------GNPT-RDALESLLAKLDKADRALCFTSGMAAL- 83 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~------g~~~-~~~l~~~l~~~~~~~~~i~~~sG~~ai- 83 (301)
.++||+ +++|+|+...+.+...+-..- ..|+.+.+ |.-. .-.+++.|++++|.++.++.+-|-+++
T Consensus 95 ~~~N~a-S~NfL~l~~~~~ike~a~~~l-----rkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~ 168 (467)
T KOG1358|consen 95 DVLNFA-SANFLGLIENEEIKEEASFTL-----RKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIE 168 (467)
T ss_pred eeeccc-chhhhhhcccHHHHHHHHHHH-----HHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeeccccchhh
Confidence 788999 899999998887765432211 12222222 3333 668999999999999999999998777
Q ss_pred HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCC-------------ceEEEEeCCCC
Q 022194 84 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPW-------------TKLVWVESPTN 150 (301)
Q Consensus 84 ~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~-------------~~~v~i~~~~n 150 (301)
+++.++.+.||.|.+..-...... ..++...-.+.+...+|+++++..+.+. -+.|+++....
T Consensus 169 S~ipafsKrGDIi~~de~~nfaIq----~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~ 244 (467)
T KOG1358|consen 169 SAIPAFSKRGDIIFVDEAVNFAIQ----KGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYA 244 (467)
T ss_pred hcchhhhccCcEEEEehhhhHHHH----HHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeecc
Confidence 588999999999888766655553 4445556677778888888888777532 35777888888
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCcCCccccCc----------cCCCCcEEEecccccccCCCCceeeEEEEcchh-
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP----------LELGADIVMHSATKFIAGHSDVMAGVLAVKGER- 219 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~----------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~- 219 (301)
++|.+.|+.+|.++..+|...+|.||.++.|..+.. .....|++++|+.-+++.. +|+.+++.-.
T Consensus 245 N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~----GgFc~G~~~i~ 320 (467)
T KOG1358|consen 245 NTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG----GGFCAGKSFIA 320 (467)
T ss_pred CCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccccc----CceeecceeeE
Confidence 899999999999999999999999999987766531 1224689999999888543 4666664322
Q ss_pred HHHHHHHhhhhcCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhCC
Q 022194 220 LAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
..+++......+...+++..+.++...+..+ .+..+.+......+...|+...
T Consensus 321 ~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s 376 (467)
T KOG1358|consen 321 DHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNS 376 (467)
T ss_pred eeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCC
Confidence 2333333444444566776666666665544 3345566676677777777654
No 356
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.1e-11 Score=105.46 Aligned_cols=274 Identities=16% Similarity=0.152 Sum_probs=160.3
Q ss_pred ceeeecC--CCCCCCCccccCeeecceeecCCCC-CCCCccccCC-CCch-HHHHHHHHHhhcCCC---------ceEEe
Q 022194 11 TLLMNFS--NEFDPYGALSTPLYQTATFKQPSAT-ENGPYDYTRS-GNPT-RDALESLLAKLDKAD---------RALCF 76 (301)
Q Consensus 11 ~~~~~~~--~~~~~~g~~~~p~~~~~~~~~~~~~-~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~---------~~i~~ 76 (301)
...+|++ ...|-.| ..|++++......... +.....|-+. |.+. .+++.+. +||.+ ..+=+
T Consensus 26 ~~KVNLgIGvY~de~G--k~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~l---lFG~d~~~l~~~Rv~t~Qt 100 (396)
T COG1448 26 PNKVNLGIGVYKDEDG--KTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKL---LFGADSPALAEDRVATVQT 100 (396)
T ss_pred cCeeeeeeeeeeCCCC--CcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHH---hcCCCcHHHHhhhHhheec
Confidence 3455554 3444455 5687776532222221 2233344443 6555 3333333 35543 23446
Q ss_pred cchHHHHHHH---HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcC---CCceEE
Q 022194 77 TSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG---PWTKLV 143 (301)
Q Consensus 77 ~sG~~ai~~~---~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~---~~~~~v 143 (301)
.+||.|+... +.-..+...|++++|.|+.+. .+++..|.++...+.- |++.+.+.++ ++..++
T Consensus 101 ~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~----~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvL 176 (396)
T COG1448 101 LGGTGALRVAADFLARFFPDATVWISDPTWPNHK----AIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVL 176 (396)
T ss_pred CCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHH----HHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEE
Confidence 7889888533 333456678999999999997 6777889888777743 6777777665 344444
Q ss_pred EEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCcccc---C------ccCCCC-cEEEecccccccCCCCcee
Q 022194 144 WVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS---R------PLELGA-DIVMHSATKFIAGHSDVMA 210 (301)
Q Consensus 144 ~i~~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~---~------~~~~~~-di~~~S~sK~~~g~~g~~~ 210 (301)
+-..+|||||.-. ..++|+++.++.+.+-++|-+|-...-+ + ....+. -+++.|+||.| |.-|=|.
T Consensus 177 LH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnf-gLYgERV 255 (396)
T COG1448 177 LHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNF-GLYGERV 255 (396)
T ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhh-hhhhhcc
Confidence 5568899999986 4788999999999999999997432211 1 111122 68999999999 4555566
Q ss_pred eEEEE--cchhHHHHH----HHhhhhcCCCCCHHhHHHH---H-------cccccHHHHHHHHHHHHHHHHHHHHhCC--
Q 022194 211 GVLAV--KGERLAKEL----YFLQNAEGSGLAPFDCWIC---L-------RGVKTMALRVEKQQDNAQKIAEFLASHP-- 272 (301)
Q Consensus 211 g~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~-------~~l~~~~~~~~~~~~~~~~l~~~l~~~~-- 272 (301)
|.+.. .+++...+. +......-..++...+... + .+.+++.+.++++.++++.|.+.|+.+.
T Consensus 256 Ga~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~ 335 (396)
T COG1448 256 GALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAP 335 (396)
T ss_pred ceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 65533 333333322 2222222222222222221 1 1223456677888888888888888621
Q ss_pred ----Cc----ceEecCCCCCCcchHHHHhh
Q 022194 273 ----RV----KKVNYAGLPEHPGHELHYSQ 294 (301)
Q Consensus 273 ----~v----~~v~~p~~~~~~~~~~~~~~ 294 (301)
.+ .-..++|+.......++++.
T Consensus 336 ~~f~~i~~Q~GMFsy~Gls~~QV~rLree~ 365 (396)
T COG1448 336 RNFDFIISQRGMFSYTGLSPEQVDRLREEF 365 (396)
T ss_pred cccchHhhcCceeecCCCCHHHHHHHHHhc
Confidence 11 11446666666666666554
No 357
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.43 E-value=5.3e-12 Score=108.80 Aligned_cols=184 Identities=23% Similarity=0.213 Sum_probs=132.0
Q ss_pred HHHHHHHHHhhcCCCceEEecchHHHHHHHHhccCCCCeEEEcC-----CCCccHHHHHhhhcccCCcEEEEecCC---C
Q 022194 57 RDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGD-----DLYGGTDRLLSRVTPKTGVVVKRVNTC---D 128 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~-----~~y~~~~~~~~~~~~~~g~~~~~~~~~---d 128 (301)
...+...++..++++.+.++++.+.|+..+...+.++.+|+++. +.+... +.+++..|.+++++... +
T Consensus 70 ~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~gg~~~v----~d~~~~aG~~l~EvG~tn~t~ 145 (395)
T COG1921 70 LTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVEGGAFRV----PDIIRLAGAKLVEVGTTNRTH 145 (395)
T ss_pred HHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEccccccCCCCCh----hHHHHHcCCEEEEecccCcCC
Confidence 44666777777888899999998888865444444455555443 244444 37788899999888864 7
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCcccc--ccHHHHHHHHHHcCCEEEEeCCcCCccc-----cCccCCCCcEEEeccccc
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPRQQI--CDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKF 201 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~G~~--~~l~~l~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~di~~~S~sK~ 201 (301)
..+++.++.+++++++-.+.+|- |.. .++++++++||++|+++++|.+.+..+. ......|+|++++|..|.
T Consensus 146 ~~d~~~AIne~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKl 224 (395)
T COG1921 146 LKDYELAINENTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKL 224 (395)
T ss_pred HHHHHHHhccCCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchh
Confidence 89999999999988876655553 444 4688899999999999999999875432 234467999999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 249 (301)
|+|| ++|++++++ +++.+++...-..+.-......+++..+++.
T Consensus 225 lgGP---qaGii~GkK-elI~~lq~~~l~Ralrv~K~tla~l~~aLe~ 268 (395)
T COG1921 225 LGGP---QAGIIVGKK-ELIEKLQSHPLKRALRVDKETLAALEAALEL 268 (395)
T ss_pred cCCC---ccceEechH-HHHHHHHhhhhhhhhhcCcHhHHHHHHHHHH
Confidence 9887 579999885 5556555555445555555555555444443
No 358
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=7.7e-12 Score=105.97 Aligned_cols=223 Identities=17% Similarity=0.145 Sum_probs=142.8
Q ss_pred ccCC-CCch-HHHHHHHHHhhcCCC---ceEEecch-HHHHHHHHhc--cCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 49 YTRS-GNPT-RDALESLLAKLDKAD---RALCFTSG-MAALAAVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 49 y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~~~~~~--~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
|+.. |.+. |+.+.+.|.++-|.+ +.|++|+| +.|+..++.+ ..+++-|+++-|-|+-|. ..+...|..
T Consensus 109 YS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYs----Ati~l~~~~ 184 (475)
T KOG0258|consen 109 YSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYS----ATISLLGGT 184 (475)
T ss_pred cccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhH----HHHHHhCCc
Confidence 5555 7676 888999998887742 56666666 6888766664 346788999999999886 333445555
Q ss_pred EEEecCC-------CHHHHHhhcC-----CCceEEEEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCccccC
Q 022194 121 VKRVNTC-------DLDEVASAIG-----PWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSR 185 (301)
Q Consensus 121 ~~~~~~~-------d~~~l~~~l~-----~~~~~v~i~~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~~ 185 (301)
.+...++ |.++++..++ -+++++++.+|.||||.+. .+++|.++|+++++.++.||+|-.-++..
T Consensus 185 ~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~ 264 (475)
T KOG0258|consen 185 QVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTT 264 (475)
T ss_pred ccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCC
Confidence 4444443 7788876665 2789999999999999996 59999999999999999999975333221
Q ss_pred c-------------cCCCC----cEEEecccccccCCCCceeeEEEEc--chhHHHHHHHhhhhcCCC--CCHHhHHH--
Q 022194 186 P-------------LELGA----DIVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFLQNAEGSG--LAPFDCWI-- 242 (301)
Q Consensus 186 ~-------------~~~~~----di~~~S~sK~~~g~~g~~~g~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~-- 242 (301)
. ..... -+.+.|.||.+.|-.|.|+|++=.- +....+.+.......-+. ......-.
T Consensus 265 ~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~V 344 (475)
T KOG0258|consen 265 GSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVV 344 (475)
T ss_pred CcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceec
Confidence 0 11111 3677788999988889999998432 222323222222111110 00000000
Q ss_pred ---------HHcccccHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 243 ---------CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 243 ---------~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.......-+...+.+..+++.+.+.+++.++|.
T Consensus 345 nPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~ 386 (475)
T KOG0258|consen 345 NPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGIS 386 (475)
T ss_pred CCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCcee
Confidence 000111123344667778888888888877653
No 359
>PRK06148 hypothetical protein; Provisional
Probab=99.43 E-value=5.6e-12 Score=124.33 Aligned_cols=263 Identities=18% Similarity=0.118 Sum_probs=158.6
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~~~ 88 (301)
.++|||.++..-+|..++.+..+.. .+.+. .. ....+..+...++.+.|.+.+.. +.+.+++||++|+.+.++
T Consensus 624 ~~ylD~~~g~~~lGH~hp~v~~Ai~-~q~~~--l~--~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~Alk 698 (1013)
T PRK06148 624 RAYLDCFNNVCHVGHAHPRVVAAAA-RQAAR--LN--TNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALR 698 (1013)
T ss_pred CEEEEcccChhhcCCCCHHHHHHHH-HHHhh--cC--CcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHH
Confidence 4788987554458877665554432 22221 11 11233556688899999988743 567889999999865444
Q ss_pred cc---CCCCeEEEcCCCCccHHHHHhhhc-----cc------CCcEEEEe------cCC--C-------HHHHHhhcC--
Q 022194 89 LL---GTGEEIVAGDDLYGGTDRLLSRVT-----PK------TGVVVKRV------NTC--D-------LDEVASAIG-- 137 (301)
Q Consensus 89 ~~---~~g~~Vlv~~~~y~~~~~~~~~~~-----~~------~g~~~~~~------~~~--d-------~~~l~~~l~-- 137 (301)
+. ..+.+|+.....||+.......+. .. .++..... +.. + .+.+++.+.
T Consensus 699 lAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 778 (1013)
T PRK06148 699 LARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM 778 (1013)
T ss_pred HHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence 42 345679998999998753211110 00 01111111 111 1 133444432
Q ss_pred ----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-Ccccc----CccCCCCcEEEecccccccC
Q 022194 138 ----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS----RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 138 ----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~----~~~~~~~di~~~S~sK~~~g 204 (301)
+++.+|+++......|.+.+ +++|.++|+++|+++|+||++. .|-.+ .....|....+.+++|.++|
T Consensus 779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lgg 858 (1013)
T PRK06148 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGN 858 (1013)
T ss_pred hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccC
Confidence 46889999988777777765 9999999999999999999985 33222 22234555555668999965
Q ss_pred CCCceeeEEEEcchhHHHHHHHh-hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----CCCcceE
Q 022194 205 HSDVMAGVLAVKGERLAKELYFL-QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKV 277 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~~~v~~v 277 (301)
|+..|.+++++ .+.+.+... ....+.+-++.++++++..++.+. +..++..+..++|++.|++ ++.+..|
T Consensus 859 --G~Plgav~~~~-ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V 935 (1013)
T PRK06148 859 --GHPMGAVVTTR-EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDV 935 (1013)
T ss_pred --CcceEEEEEcH-HHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 45678888874 454533221 123445567888888888777663 2345556666666666654 4544444
Q ss_pred ecCC
Q 022194 278 NYAG 281 (301)
Q Consensus 278 ~~p~ 281 (301)
+..|
T Consensus 936 rG~G 939 (1013)
T PRK06148 936 RGMG 939 (1013)
T ss_pred eeec
Confidence 4433
No 360
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=2e-11 Score=101.42 Aligned_cols=222 Identities=18% Similarity=0.242 Sum_probs=143.2
Q ss_pred HHHHHHHHHhhcCCCceEEecchHHHHHHHHhccC---------C-CC-eEEEcCCCCccHH----------HHHhhhcc
Q 022194 57 RDALESLLAKLDKADRALCFTSGMAALAAVTHLLG---------T-GE-EIVAGDDLYGGTD----------RLLSRVTP 115 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~~~---------~-g~-~Vlv~~~~y~~~~----------~~~~~~~~ 115 (301)
.-++++.+.++|+.+.++-.++|.+|...+..+.+ | .. +|+.....|++-. ..|.....
T Consensus 103 ~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp 182 (427)
T KOG1402|consen 103 LGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGP 182 (427)
T ss_pred HHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCC
Confidence 44566777788888888889999988864444332 2 22 3444444444421 11112111
Q ss_pred cCCcEEEEecCCCHHHHHhhcC-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccc-cC----
Q 022194 116 KTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL-SR---- 185 (301)
Q Consensus 116 ~~g~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~~---- 185 (301)
-.--.+..++..|.++++.+++ ++.++++++..+...|.+.| +++..++|++||+++|.||++..-.. +.
T Consensus 183 ~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~ 262 (427)
T KOG1402|consen 183 FLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLAC 262 (427)
T ss_pred CCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEe
Confidence 1111266677779999999998 57889999999999999865 99999999999999999999864322 21
Q ss_pred -ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHH
Q 022194 186 -PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQ 262 (301)
Q Consensus 186 -~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 262 (301)
......|+++ +.|+++|. -+..+.+++. ++++..++...+.++.+-++..++.++.+++.+.+ ..++....-.
T Consensus 263 d~env~PDivi--lgKalSGG-~~Pvsavl~~-~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~ 338 (427)
T KOG1402|consen 263 DYENVRPDIVI--LGKALSGG-VYPVSAVLAD-DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGE 338 (427)
T ss_pred ehhhcCCCeEE--EeccccCC-eeeeEEEEec-HHHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222457777 89999763 2334555554 45555566667777777788888888888887643 2333334444
Q ss_pred HHHHHHHhCC----C-cceEecCCC
Q 022194 263 KIAEFLASHP----R-VKKVNYAGL 282 (301)
Q Consensus 263 ~l~~~l~~~~----~-v~~v~~p~~ 282 (301)
.++..|.+++ + ++.|+..|+
T Consensus 339 ~l~~~L~~l~~~~p~~v~~VRGrGl 363 (427)
T KOG1402|consen 339 ILRDQLNKLQKKFPHVVKEVRGRGL 363 (427)
T ss_pred HHHHHHHhccccccchhheeeccce
Confidence 5555555542 2 355666665
No 361
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.41 E-value=3.9e-12 Score=107.87 Aligned_cols=227 Identities=18% Similarity=0.131 Sum_probs=139.3
Q ss_pred CCchHHHHHHHHHhhcCC--CceEEecchHHHHHHHHhc---cCCCCeEEEcCCCCccHHHHHhhhcc--cCCc------
Q 022194 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP--KTGV------ 119 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~--~~g~------ 119 (301)
-++...++.+.|.+.+-. ..+.+++||++|..+.+.+ ....-.++....+||+.......+-. ....
T Consensus 90 ~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~ 169 (442)
T KOG1404|consen 90 LNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVA 169 (442)
T ss_pred cCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCC
Confidence 456677788888777633 3577889999998543332 23334677778888887532211100 0000
Q ss_pred --EEEEecCC--------C---------HHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEE
Q 022194 120 --VVKRVNTC--------D---------LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALL 172 (301)
Q Consensus 120 --~~~~~~~~--------d---------~~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~l 172 (301)
....++++ + .+++++.+. .++.+.+.+....-.|.+.+ +++..++|+++|.++
T Consensus 170 ~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~ 249 (442)
T KOG1404|consen 170 SGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLF 249 (442)
T ss_pred CcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEE
Confidence 01111111 1 133443432 46777888888887777753 999999999999999
Q ss_pred EEeCCcCC----ccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh-hhcCCCCCHHhHHHHHccc
Q 022194 173 LVDNSIMS----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWICLRGV 247 (301)
Q Consensus 173 i~D~~~~~----~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 247 (301)
|.||+++. |.+......++...+.++.|.+++. +..|.++..+ ++.+.+.... ...+.+-+|.+++..+..+
T Consensus 250 IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG--~Pl~AVvtt~-EIa~v~~~~~~~fnTyggnP~a~avg~aVL 326 (442)
T KOG1404|consen 250 IADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNG--FPLGAVVTTP-EIADVLNQKSSHFNTYGGNPVACAVGLAVL 326 (442)
T ss_pred EehhhhhccccccccccccccCCCccHHHHHhhccCC--CcceeeecCH-HHHHHHHhccccccccCCCchhHHHHHHHH
Confidence 99999863 4555566677888888999999653 5678887775 4545444433 4444556777777777777
Q ss_pred ccHHH--HHHHHHHHHHHHHHHHHh----CCCcceEecCCC
Q 022194 248 KTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGL 282 (301)
Q Consensus 248 ~~~~~--~~~~~~~~~~~l~~~l~~----~~~v~~v~~p~~ 282 (301)
+.+++ ..++..+...+|.+.|.+ +|.|..|+..||
T Consensus 327 ~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GL 367 (442)
T KOG1404|consen 327 KVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGL 367 (442)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeeccccee
Confidence 66542 223333334455555543 566666666555
No 362
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.40 E-value=1.3e-11 Score=108.48 Aligned_cols=216 Identities=15% Similarity=0.062 Sum_probs=141.8
Q ss_pred CCchHHHHHHHHHhhcCCCceEEecchHHHH-HHHHhccC-CCCeEEEcCC----CCccHHHHHhhhcccCCcEEEEec-
Q 022194 53 GNPTRDALESLLAKLDKADRALCFTSGMAAL-AAVTHLLG-TGEEIVAGDD----LYGGTDRLLSRVTPKTGVVVKRVN- 125 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai-~~~~~~~~-~g~~Vlv~~~----~y~~~~~~~~~~~~~~g~~~~~~~- 125 (301)
++|+..+|++..++++|.+.++.+.+|+.+- .++..+++ ||+++++..+ .|..+.......+...|+.++.+.
T Consensus 72 gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~ 151 (467)
T TIGR02617 72 GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYT 151 (467)
T ss_pred cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccc
Confidence 6788999999999999999999999998664 45566777 6777775443 222211111134455666655542
Q ss_pred -----------C---CCHHHHHhhcCC----CceEEEEeCCCCCccc-cc---cHHHHHHHHHHcCCEEEEeCCcCC---
Q 022194 126 -----------T---CDLDEVASAIGP----WTKLVWVESPTNPRQQ-IC---DIRKIAEMAHAHGALLLVDNSIMS--- 180 (301)
Q Consensus 126 -----------~---~d~~~l~~~l~~----~~~~v~i~~~~np~G~-~~---~l~~l~~l~~~~~~~li~D~~~~~--- 180 (301)
. -|++++++.+++ ++..+.++-.+|..|. .. .++++.++|++||+.++.|.+...
T Consensus 152 ~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA 231 (467)
T TIGR02617 152 KEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENA 231 (467)
T ss_pred hhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHh
Confidence 1 188999999973 4555555544565444 44 488899999999999999998532
Q ss_pred --------ccccCcc-------CCCCcEEEecccccccCCCCceeeEEEEcch---hHHHHHHHhhhh-----cCCCCCH
Q 022194 181 --------PVLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGE---RLAKELYFLQNA-----EGSGLAP 237 (301)
Q Consensus 181 --------~~~~~~~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~---~~~~~~~~~~~~-----~~~~~~~ 237 (301)
+....+. ...+|.+..|++|.++.| ++|+++++++ .+.++.+...-. +-.+++.
T Consensus 232 ~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlag 308 (467)
T TIGR02617 232 YFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEG 308 (467)
T ss_pred hhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---ccceEEecchhHHHHHHHHHhhcccccCCcCcCchhH
Confidence 1111111 145899999999999776 5799999988 555544432221 1135666
Q ss_pred HhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 238 FDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 238 ~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
....++..++++. .++.+......++|.+.|.+.
T Consensus 309 rd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 309 GAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred HHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 6666665566542 445566667777888888764
No 363
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.39 E-value=1.4e-11 Score=108.51 Aligned_cols=227 Identities=16% Similarity=0.150 Sum_probs=142.2
Q ss_pred CCchHHHHHHHHHhhcC---CCceEEecchHHHHHHHHhcc--------CC-CCeEEEcCCCCccHHHHHhhhcc-----
Q 022194 53 GNPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTHLL--------GT-GEEIVAGDDLYGGTDRLLSRVTP----- 115 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~~~~~~--------~~-g~~Vlv~~~~y~~~~~~~~~~~~----- 115 (301)
+.| -.+|.+.|+++.. .+.+++.+||++|+.+.+.+. +| ..+++.-...||+..-..-.+..
T Consensus 86 ~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~ 164 (449)
T COG0161 86 HEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALR 164 (449)
T ss_pred Cch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhh
Confidence 335 7888899998876 568888999999986444431 23 33477777888886321101111
Q ss_pred -----cCCcEEEEecC-----------------CCHHHHHhhcC----CCceEEEEeCCCCC-cccccc----HHHHHHH
Q 022194 116 -----KTGVVVKRVNT-----------------CDLDEVASAIG----PWTKLVWVESPTNP-RQQICD----IRKIAEM 164 (301)
Q Consensus 116 -----~~g~~~~~~~~-----------------~d~~~l~~~l~----~~~~~v~i~~~~np-~G~~~~----l~~l~~l 164 (301)
..-..+..++. ...+++++.+. +++.+++++..... .|...| ++++.++
T Consensus 165 ~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~i 244 (449)
T COG0161 165 HAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREI 244 (449)
T ss_pred hhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHH
Confidence 00011111111 11455666654 57888899988776 666653 9999999
Q ss_pred HHHcCCEEEEeCCcCC----ccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHH-----hhhhcCCCC
Q 022194 165 AHAHGALLLVDNSIMS----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-----LQNAEGSGL 235 (301)
Q Consensus 165 ~~~~~~~li~D~~~~~----~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~ 235 (301)
|++||+++|.||+-.. |.+..-...|+...+.+++|.+++. -+..|.++++++ +.+.+.. +.+.++.+-
T Consensus 245 C~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~G-Y~Pl~a~l~~~~-I~~~~~~~~~~~f~HG~TYsg 322 (449)
T COG0161 245 CDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGG-YLPLSAVLTSDR-IYEAFSDGDAGAFMHGHTYSG 322 (449)
T ss_pred HHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeeccccccc-chhhHhHhhhHH-HHHHHhcccCCeeccCCcccc
Confidence 9999999999999642 3333334445555556699999664 344566666644 4443322 234455667
Q ss_pred CHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh----CCCcceEecCCC
Q 022194 236 APFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGL 282 (301)
Q Consensus 236 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~----~~~v~~v~~p~~ 282 (301)
+|.+++++++.++.+. ..+++..+...++.+.|++ +|.|..|+.-|+
T Consensus 323 hPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gl 375 (449)
T COG0161 323 NPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGL 375 (449)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccce
Confidence 8999999999888763 3445555666666666664 457767776665
No 364
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.39 E-value=4.8e-11 Score=110.55 Aligned_cols=171 Identities=17% Similarity=0.152 Sum_probs=116.8
Q ss_pred eEEEcCCCCccHHHHHhhhcccCCc---EEEEecCC-----CHHHHHhhcC----C--CceEEEEeCCCCCccccccHHH
Q 022194 95 EIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIG----P--WTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 95 ~Vlv~~~~y~~~~~~~~~~~~~~g~---~~~~~~~~-----d~~~l~~~l~----~--~~~~v~i~~~~np~G~~~~l~~ 160 (301)
+|+++.-.|+++. +.+...|+ .++.++.+ |++.|++.+. + .+-+|+.+..++.+|.+.|+++
T Consensus 224 ~vl~s~~aHyS~~----KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~e 299 (608)
T TIGR03811 224 KWLVPQTKHYSWL----KAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDK 299 (608)
T ss_pred EEEECCCccHHHH----HHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHH
Confidence 4777777788876 55555666 46666654 7888887775 2 2456677788889999999999
Q ss_pred HHHHH---HHcCC--EEEEeCCcCCcc---ccC------c------------------------------cCCCCcEEEe
Q 022194 161 IAEMA---HAHGA--LLLVDNSIMSPV---LSR------P------------------------------LELGADIVMH 196 (301)
Q Consensus 161 l~~l~---~~~~~--~li~D~~~~~~~---~~~------~------------------------------~~~~~di~~~ 196 (301)
|+++| +++|+ |+++|.+|+... +.. + .-..+|-++.
T Consensus 300 I~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItv 379 (608)
T TIGR03811 300 IVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTI 379 (608)
T ss_pred HHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEe
Confidence 99998 67887 699999998643 111 0 0125799999
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHhhh-----h------------cCC--CCCHHhHHHHHccc----ccHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-----A------------EGS--GLAPFDCWICLRGV----KTMALR 253 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~-----~------------~~~--~~~~~~~~~~~~~l----~~~~~~ 253 (301)
++||++..|-+ +|+++.++..+.+.+..... . .+. +......|+.++.+ +-+.+.
T Consensus 380 DpHK~g~~Py~--~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~ 457 (608)
T TIGR03811 380 DPHKMGYIPYS--AGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKL 457 (608)
T ss_pred CcccccccCCC--eEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHH
Confidence 99999877754 68888887765443321000 0 001 11134455555544 347888
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 022194 254 VEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~ 271 (301)
+++..+.++++.+.|+..
T Consensus 458 i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 458 IGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 899999999999999873
No 365
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.38 E-value=2.7e-11 Score=116.13 Aligned_cols=190 Identities=23% Similarity=0.325 Sum_probs=139.8
Q ss_pred ecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCC-------chHHHHHHHHHhhcCCC--ceEEecchHHHHH-
Q 022194 15 NFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGN-------PTRDALESLLAKLDKAD--RALCFTSGMAALA- 84 (301)
Q Consensus 15 ~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~-------~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~- 84 (301)
+|- +..|++...+|++.+.....++ +...|.||.. ...-+++..++++.|.+ ++-+...+|++..
T Consensus 67 ~fi-g~G~y~~~~p~~i~r~v~~~p~----~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa 141 (939)
T TIGR00461 67 SYI-GMGYYGTILPPVIQRNLLENPG----WYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEA 141 (939)
T ss_pred ccC-CCCcCCCcCChHHHHHHHhCch----hhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHH
Confidence 443 4567777778888877655555 2334555521 22556778899999998 5577777775443
Q ss_pred HHHh--cc-CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 022194 85 AVTH--LL-GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 85 ~~~~--~~-~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
++++ .- +++++|++++..|+.+...++..++..|++++.++ .+++++.+ ++.++++++|++ .|.+.++++|
T Consensus 142 ~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~~l~~~~--~~~~v~~q~Pn~-~G~ied~~~i 215 (939)
T TIGR00461 142 MALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CSDIKKAV--DVFGCLLQYPAT-DGSILDYKQL 215 (939)
T ss_pred HHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HHHHhhcC--CEEEEEEECCCC-CeEEecHHHH
Confidence 2222 22 23479999999999999888888899999999886 45666665 578888999987 8999999999
Q ss_pred HHHHHHcCCEEEEeCCcC-CccccCccCCCCcEEEeccccc-----ccCCCCceeeEEEEcch
Q 022194 162 AEMAHAHGALLLVDNSIM-SPVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 162 ~~l~~~~~~~li~D~~~~-~~~~~~~~~~~~di~~~S~sK~-----~~g~~g~~~g~~~~~~~ 218 (301)
++++|++|.+++++.-.. ......|.++|+||++++..++ |||| -+|++.++++
T Consensus 216 ~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP---~aG~~a~~~~ 275 (939)
T TIGR00461 216 IDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGP---HAAFFAVKDE 275 (939)
T ss_pred HHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCC---ceeeeeecHh
Confidence 999999999999966543 4556688899999998876664 4344 3788888754
No 366
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.38 E-value=8.3e-12 Score=112.80 Aligned_cols=251 Identities=14% Similarity=0.122 Sum_probs=141.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
..+|||.++ +.-+|..++.+..+.. .+.+ ... .++ ...+...++.+.|.+++ +.+.+.+++||++|+.+.+
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~q~~--~~~--~~~-~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~Al 121 (431)
T PRK06209 48 NEYIEYGMGLRAVGLGHAYPPVVEAVR-EALQ--DGC--NFT-RPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAV 121 (431)
T ss_pred CEEEEccccccchhcCCCCHHHHHHHH-HHHH--hCc--CCC-CCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHH
Confidence 368888533 2348887766655432 2211 111 111 11122457788888876 3467888999999986444
Q ss_pred hcc---CCCCeEEEc-CCCCccHHHHHhhh-cccCC------cEEEEecCCCHHHHHhhcC---CCceEEEEeCCCCCcc
Q 022194 88 HLL---GTGEEIVAG-DDLYGGTDRLLSRV-TPKTG------VVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQ 153 (301)
Q Consensus 88 ~~~---~~g~~Vlv~-~~~y~~~~~~~~~~-~~~~g------~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~~~np~G 153 (301)
++. ....+|+.. ...||+........ ....+ ..+..++..|++++++.+. +++.+|+++......+
T Consensus 122 klAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~ 201 (431)
T PRK06209 122 RLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATADEP 201 (431)
T ss_pred HHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCCCC
Confidence 432 223456554 34444321110000 00011 1123444558888988875 4577888876554323
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCCcCCccccC--cc-CCCCcEEEecccccccCCCCceeeEEEEcchhHHHH--HHHh-
Q 022194 154 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSR--PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE--LYFL- 227 (301)
Q Consensus 154 ~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~--~~-~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~--~~~~- 227 (301)
....+++|.++|++||+++|+||++....... .. ..+....+.+++|.+++ |+.+|++++++ .+.+. +...
T Consensus 202 ~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PDi~t~gK~lgg--G~p~~av~~~~-~i~~~~~~~~~~ 278 (431)
T PRK06209 202 QDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSCFGKALGN--GFAVSALAGKR-EYMELGGLEHTD 278 (431)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcceeeehhhhcC--CcccEEEEEHH-HHHhhhcccccC
Confidence 33349999999999999999999984221111 11 13444455779999965 35578888774 44443 1111
Q ss_pred -h----hhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 228 -Q----NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 228 -~----~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
. ...+.+.++..++++++.++.+. ...++..++.+++++.|++
T Consensus 279 ~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 279 RERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNE 328 (431)
T ss_pred CCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 1 12223345577777777766653 2356666666777776654
No 367
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.38 E-value=2.9e-11 Score=106.69 Aligned_cols=208 Identities=22% Similarity=0.235 Sum_probs=130.8
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchH---HHHHHHHhccCC-CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHH
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGM---AALAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD 130 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~---~ai~~~~~~~~~-g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~ 130 (301)
..+++..++++.|.+ ++-+..+++ +|+.++.+..+. +++|+++...|+.+...++..+...|++++.++.++..
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~ 191 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG 191 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC
Confidence 567889999999998 344555554 444333444333 46999999999999988888899999999999865321
Q ss_pred HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCc--CCccccCccCCCCcEEEecccccccCCC--
Q 022194 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI--MSPVLSRPLELGADIVMHSATKFIAGHS-- 206 (301)
Q Consensus 131 ~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~--~~~~~~~~~~~~~di~~~S~sK~~~g~~-- 206 (301)
... ++++.+|++++|++ .|.+.++++|++++|++|+++++ .+- +.+.+..|.++|+||++++ +|.|+-|.
T Consensus 192 ~~d---~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~ 265 (429)
T PF02347_consen 192 TTD---DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGF 265 (429)
T ss_dssp SB----STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CC
T ss_pred Ccc---ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCC
Confidence 111 68899999999998 89999999999999999999988 553 4566778999999999887 77654331
Q ss_pred -CceeeEEEEcchhHHHHHH-------------------------Hhhh--hcCCCC-CHHh------HHHHHcccccHH
Q 022194 207 -DVMAGVLAVKGERLAKELY-------------------------FLQN--AEGSGL-APFD------CWICLRGVKTMA 251 (301)
Q Consensus 207 -g~~~g~~~~~~~~~~~~~~-------------------------~~~~--~~~~~~-~~~~------~~~~~~~l~~~~ 251 (301)
|.-.|++.++++.. +.+- .++. ...+.. +... .++...+-+-+.
T Consensus 266 GGP~~G~~a~~~~l~-r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~ 344 (429)
T PF02347_consen 266 GGPGAGFFAVREDLV-RQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLR 344 (429)
T ss_dssp C-S--EEEEE-GGGG-GGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeeEEEhhhhh-hhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHH
Confidence 22368888886532 2110 0111 011111 1111 222233344466
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 022194 252 LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 252 ~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.-++...++.++.+.|++.
T Consensus 345 ~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 345 EIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 77788999999999999886
No 368
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.37 E-value=2e-11 Score=104.24 Aligned_cols=211 Identities=16% Similarity=0.174 Sum_probs=137.8
Q ss_pred HHHHHHHHHhhc---CCCceEEecchHHHHHHHHhccC-------CC--CeEEEcCCCCccHHHHHhhh--cccCCc---
Q 022194 57 RDALESLLAKLD---KADRALCFTSGMAALAAVTHLLG-------TG--EEIVAGDDLYGGTDRLLSRV--TPKTGV--- 119 (301)
Q Consensus 57 ~~~l~~~l~~~~---~~~~~i~~~sG~~ai~~~~~~~~-------~g--~~Vlv~~~~y~~~~~~~~~~--~~~~g~--- 119 (301)
.-++++.+.+.. +++.+.+.+|||+|+.+++.+.+ +- .+++....+||+-...+-.. ...++.
T Consensus 100 av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~ 179 (433)
T KOG1401|consen 100 AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFD 179 (433)
T ss_pred HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCC
Confidence 445556666666 56688899999999864443321 11 24898899999875432221 122222
Q ss_pred ----EEEEecCCCHHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcc-cc---
Q 022194 120 ----VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPV-LS--- 184 (301)
Q Consensus 120 ----~~~~~~~~d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~-~~--- 184 (301)
++......|..++++.++ .++.+|+++......|.++. +..|.++|+++|+++|.||++.... ..
T Consensus 180 p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~ 259 (433)
T KOG1401|consen 180 PIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW 259 (433)
T ss_pred CCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH
Confidence 344444558888988887 35799999988877777642 7889999999999999999987422 21
Q ss_pred CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh---hcCCCCCHHhHHHHHcccccH--HHHHHHHHH
Q 022194 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---AEGSGLAPFDCWICLRGVKTM--ALRVEKQQD 259 (301)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~ 259 (301)
.....++...+.++.|.++| |+..|+..++++ +...+..-.+ ..+..-++.++.+....++++ .+..++..+
T Consensus 260 a~e~~~~~PDI~t~aK~L~g--GlPigA~~v~~k-V~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~ 336 (433)
T KOG1401|consen 260 AQEYFGVTPDITTVAKPLGG--GLPIGATGVRDK-VAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSK 336 (433)
T ss_pred HHHHhCcCCcceeehhhccC--CceeEEEeehHH-HHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHH
Confidence 12223566666779999965 478899888854 4454433333 444556777777777777765 344555555
Q ss_pred HHHHHHHHHHh
Q 022194 260 NAQKIAEFLAS 270 (301)
Q Consensus 260 ~~~~l~~~l~~ 270 (301)
..+.|++.|.+
T Consensus 337 ~~k~L~~~l~e 347 (433)
T KOG1401|consen 337 IGKELRKLLDE 347 (433)
T ss_pred HHHHHHHHHHH
Confidence 55555555543
No 369
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.32 E-value=4.1e-11 Score=108.50 Aligned_cols=250 Identities=12% Similarity=0.069 Sum_probs=141.2
Q ss_pred ceeeecCCC--CCCCCccccCeee--cceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc---CCCceEEecchHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQ--TATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD---KADRALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~--~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~---~~~~~i~~~sG~~ai 83 (301)
.+++||.++ +.-+|..++.+.. +.. .+.............+..+...++.+.|.++. +.+.+.+++||++|+
T Consensus 45 ~~ylD~~~g~~~~~lGh~~p~v~~~~ai~-~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAv 123 (443)
T PRK08297 45 RRYLDMFTFFASSALGMNHPALADDPEFR-AELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAV 123 (443)
T ss_pred CEeeecccCHhhhcCCCCChHHhhHHHHH-HHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHH
Confidence 468888544 4458888777665 322 11110000000111123455777888888876 235788899999998
Q ss_pred HHHHhccC---------C------CCeEEEcCCCCccHHHHHhhhccc-------CC------cEEEEe--cC-------
Q 022194 84 AAVTHLLG---------T------GEEIVAGDDLYGGTDRLLSRVTPK-------TG------VVVKRV--NT------- 126 (301)
Q Consensus 84 ~~~~~~~~---------~------g~~Vlv~~~~y~~~~~~~~~~~~~-------~g------~~~~~~--~~------- 126 (301)
.+.+.+.+ . +.+|+....+||+........... .. +....+ +.
T Consensus 124 e~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (443)
T PRK08297 124 ENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEE 203 (443)
T ss_pred HHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccch
Confidence 64444331 1 367999999999985332111100 00 000000 00
Q ss_pred ------CCHHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccCc---cCC
Q 022194 127 ------CDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP---LEL 189 (301)
Q Consensus 127 ------~d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~~---~~~ 189 (301)
.+++++++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||++.. |..+.. ...
T Consensus 204 ~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~ 283 (443)
T PRK08297 204 VEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQL 283 (443)
T ss_pred hhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhc
Confidence 02344555553 67899999988777777642 99999999999999999999853 232211 122
Q ss_pred C--CcEEEecccccccCCCCceeeEEEEcchhHHHHHH-H----hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHH
Q 022194 190 G--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-F----LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDN 260 (301)
Q Consensus 190 ~--~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~ 260 (301)
+ .|++ +++|.+. .+|++..+ + +..... . .....+.+.++..+++++..++.+. +..++..+.
T Consensus 284 gv~PDiv--~~gK~l~-----~~a~l~~~-~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~ 354 (443)
T PRK08297 284 GVRPDIV--AFGKKTQ-----VCGIMAGR-R-VDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQ 354 (443)
T ss_pred CCCCCEE--Eeccccc-----ccceecch-H-HHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3 4555 4899872 24555443 2 211110 1 1123344567777777777776553 344556666
Q ss_pred HHHHHHHHHh
Q 022194 261 AQKIAEFLAS 270 (301)
Q Consensus 261 ~~~l~~~l~~ 270 (301)
.+++.+.|++
T Consensus 355 g~~l~~~L~~ 364 (443)
T PRK08297 355 GEYLLARLEE 364 (443)
T ss_pred HHHHHHHHHH
Confidence 6666666654
No 370
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.31 E-value=4.7e-11 Score=114.22 Aligned_cols=267 Identities=13% Similarity=0.102 Sum_probs=150.3
Q ss_pred eeeecCCCCCC--CCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHHH
Q 022194 12 LLMNFSNEFDP--YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAAV 86 (301)
Q Consensus 12 ~~~~~~~~~~~--~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~~ 86 (301)
.++|+.++-.. +|..++|.+..+...+.. +...+....+.++...+|.+.|.+..+ .+.+++.++|++|+.+.
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~--rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~A 443 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAG--RYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVA 443 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHh--hCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHH
Confidence 67777644333 443346666655433222 112222212245667888888888664 34688889999888533
Q ss_pred Hhcc--------C--------------CCCeEEEcCCCCccHHHHHhhhcc----------c----CCcEEE--------
Q 022194 87 THLL--------G--------------TGEEIVAGDDLYGGTDRLLSRVTP----------K----TGVVVK-------- 122 (301)
Q Consensus 87 ~~~~--------~--------------~g~~Vlv~~~~y~~~~~~~~~~~~----------~----~g~~~~-------- 122 (301)
+.+. . ...+|+....+||+.......+.. . .+..+.
T Consensus 444 lKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~ 523 (817)
T PLN02974 444 LKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRN 523 (817)
T ss_pred HHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccc
Confidence 2221 1 134689889999986432211111 0 000000
Q ss_pred -----EecCC-------------------------------CHHHHHhhcC--------CCceEEEEeCC-CCCcccccc
Q 022194 123 -----RVNTC-------------------------------DLDEVASAIG--------PWTKLVWVESP-TNPRQQICD 157 (301)
Q Consensus 123 -----~~~~~-------------------------------d~~~l~~~l~--------~~~~~v~i~~~-~np~G~~~~ 157 (301)
.++.. ..+.+++.+. +++.+|+++.. ....|.+.+
T Consensus 524 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~ 603 (817)
T PLN02974 524 GRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLI 603 (817)
T ss_pred ccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccC
Confidence 00000 0134555543 46889999985 566677753
Q ss_pred ----HHHHHHHHHHcCCEEEEeCCcCCc----cccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHH---
Q 022194 158 ----IRKIAEMAHAHGALLLVDNSIMSP----VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--- 226 (301)
Q Consensus 158 ----l~~l~~l~~~~~~~li~D~~~~~~----~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~--- 226 (301)
+++|.++|++||+++|.||++... .+......|+...+.+++|.++|+ -+..|.++++++ +.+.+..
T Consensus 604 ~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG-~~Plaa~l~~~~-I~~~f~~~~~ 681 (817)
T PLN02974 604 DPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTGG-LVPLAATLATEE-VFEAFRGPSK 681 (817)
T ss_pred CHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeecccccCC-CCccEEEEEcHH-HHHhhccccc
Confidence 899999999999999999998632 222233345555555599999653 134677777644 4443321
Q ss_pred ---hhhhcCCCCCHHhHHHHHcccccHHHH--HHHHHHHH----H----HHHHHHHhCCCcceEecCCC
Q 022194 227 ---LQNAEGSGLAPFDCWICLRGVKTMALR--VEKQQDNA----Q----KIAEFLASHPRVKKVNYAGL 282 (301)
Q Consensus 227 ---~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~----~----~l~~~l~~~~~v~~v~~p~~ 282 (301)
..+.++.+.++..++++++.++.+.+. .+.+.++. . .+.+.++++|.|..|+.-|+
T Consensus 682 ~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl 750 (817)
T PLN02974 682 LDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGT 750 (817)
T ss_pred cCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeee
Confidence 123445667888888888877765431 12222222 2 23234456777777766554
No 371
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.31 E-value=5.8e-11 Score=107.34 Aligned_cols=252 Identities=13% Similarity=0.070 Sum_probs=137.9
Q ss_pred ceeeecCCC--CCCCCccccCee--ecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc---CCCceEEecchHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLY--QTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD---KADRALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~--~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~---~~~~~i~~~sG~~ai 83 (301)
..+|||.++ +.-+|..++.+. .+.. .+................+...++.+.|++.. +.+.+.+.+||++|+
T Consensus 38 ~~ylD~~~g~~~~~lGh~~p~v~~~~ai~-~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAv 116 (431)
T TIGR03251 38 RRYLDMFSFFASMALGMNHPALVDDLAFR-ARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAV 116 (431)
T ss_pred CChhhcccChhhcCCCCCChhhhHHHHHH-HHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHH
Confidence 357777433 445888777776 3321 11110000001111123455677777777764 345788899999998
Q ss_pred HHHHhccC---------------CCCeEEEcCCCCccHHHHHhhhcccC------C-------cEEE--EecC-------
Q 022194 84 AAVTHLLG---------------TGEEIVAGDDLYGGTDRLLSRVTPKT------G-------VVVK--RVNT------- 126 (301)
Q Consensus 84 ~~~~~~~~---------------~g~~Vlv~~~~y~~~~~~~~~~~~~~------g-------~~~~--~~~~------- 126 (301)
.+.+.+.+ .+.+|+....+||+.....-...... . +... ..+.
T Consensus 117 e~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 196 (431)
T TIGR03251 117 ENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQ 196 (431)
T ss_pred HHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccch
Confidence 64444321 13679999999998853321111100 0 0000 0000
Q ss_pred ------CCHHHHHhhc---CCCceEEEEeCCCCCccccc----cHHHHHHHHHHcCCEEEEeCCcC-CccccC---ccCC
Q 022194 127 ------CDLDEVASAI---GPWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLEL 189 (301)
Q Consensus 127 ------~d~~~l~~~l---~~~~~~v~i~~~~np~G~~~----~l~~l~~l~~~~~~~li~D~~~~-~~~~~~---~~~~ 189 (301)
.+++++++.+ .+++.+|+++......|.+. .+++|.++|++||+++|+||+++ .+..+. ....
T Consensus 197 ~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~ 276 (431)
T TIGR03251 197 VIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQL 276 (431)
T ss_pred hhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhc
Confidence 1234445555 36789999998888778775 39999999999999999999987 332221 1122
Q ss_pred C--CcEEEecccccccCCCCceeeEEEEcch-hHHHHHHH--hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHH
Q 022194 190 G--ADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYF--LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQ 262 (301)
Q Consensus 190 ~--~di~~~S~sK~~~g~~g~~~g~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~ 262 (301)
+ .|+++ ++|.+ | .+|++....- .+...... .....+.+.++..++++...++.+. ...++..+..+
T Consensus 277 gv~PDi~~--~gK~~--~---~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~ 349 (431)
T TIGR03251 277 GVQPDIVA--FGKKT--Q---VCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGA 349 (431)
T ss_pred CCCCCEEE--ecccC--c---cceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3 45554 88986 2 2455544320 11111110 1122334456777777777776653 23345555566
Q ss_pred HHHHHHHh
Q 022194 263 KIAEFLAS 270 (301)
Q Consensus 263 ~l~~~l~~ 270 (301)
++.+.|++
T Consensus 350 ~l~~~L~~ 357 (431)
T TIGR03251 350 HLLARLHE 357 (431)
T ss_pred HHHHHHHH
Confidence 66655543
No 372
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.29 E-value=3.7e-11 Score=108.66 Aligned_cols=250 Identities=14% Similarity=0.050 Sum_probs=137.6
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHh----hc--CCCceEEecchHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAK----LD--KADRALCFTSGMAA 82 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~----~~--~~~~~i~~~sG~~a 82 (301)
.+++||.++ +.-+|..++.+..+....+.. . .......+.++...++.+.|.+ +. +.+.+.+++||++|
T Consensus 58 ~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~--~-~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEA 134 (464)
T TIGR00699 58 NRLLDLYSQISSIPIGYNNPALLKAAQSPEMA--T-TLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDA 134 (464)
T ss_pred CEEEEccCCHhhhcCCCCCHHHHHHHHHHHHH--H-hhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHH
Confidence 478888533 334787766666654321101 0 0001112345556667777644 44 23577888999999
Q ss_pred HHHHHhccC---------------------------C---CCeEEEcCCCCccHHHHHhhhcc-----cCCc---EEEEe
Q 022194 83 LAAVTHLLG---------------------------T---GEEIVAGDDLYGGTDRLLSRVTP-----KTGV---VVKRV 124 (301)
Q Consensus 83 i~~~~~~~~---------------------------~---g~~Vlv~~~~y~~~~~~~~~~~~-----~~g~---~~~~~ 124 (301)
+.+++.+.+ + ..+|+....+||+.......... ..+. .+..+
T Consensus 135 vE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~ 214 (464)
T TIGR00699 135 NELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQA 214 (464)
T ss_pred HHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceec
Confidence 864444321 1 23799999999998543211111 1011 00111
Q ss_pred cC-------------------CCHHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCc
Q 022194 125 NT-------------------CDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 125 ~~-------------------~d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~ 178 (301)
+. .+++.+++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||++
T Consensus 215 p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~ 294 (464)
T TIGR00699 215 PFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ 294 (464)
T ss_pred CCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee
Confidence 10 13455666664 46899999988887888876 999999999999999999997
Q ss_pred CC-ccccC---ccCCCCc--EEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH-
Q 022194 179 MS-PVLSR---PLELGAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA- 251 (301)
Q Consensus 179 ~~-~~~~~---~~~~~~d--i~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 251 (301)
.. +..+. ....|.. ..+.+++|.+++. |+++.+ +.+ ..........+...++..++++...++.+.
T Consensus 295 tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~g-----G~~~~~-~~~-~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~ 367 (464)
T TIGR00699 295 TGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTA-----GYFFHD-PAF-RPNKPYRQFNTWMGDPSRALILREIIQEIKR 367 (464)
T ss_pred eCCCCCcchhHHHhcCCCCCCCEEEehhhhccC-----Cccccc-hhc-cCCCCcccccCCCCCHHHHHHHHHHHHHHHh
Confidence 52 22121 1122322 3345589999431 333332 222 100111233344556777777776766653
Q ss_pred -HHHHHHHHHHHHHHHHHHh
Q 022194 252 -LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 252 -~~~~~~~~~~~~l~~~l~~ 270 (301)
...++..+..+++.+.|++
T Consensus 368 ~~l~~~~~~~g~~l~~~L~~ 387 (464)
T TIGR00699 368 KDLLENVAHVGDYLYTGLED 387 (464)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 2334444444566666653
No 373
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.28 E-value=5e-11 Score=102.65 Aligned_cols=155 Identities=22% Similarity=0.271 Sum_probs=121.4
Q ss_pred HHHHHHHHHhhcCCCceEEe-cchHH----HHHHHHhcc-C----CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 57 RDALESLLAKLDKADRALCF-TSGMA----ALAAVTHLL-G----TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~-~sG~~----ai~~~~~~~-~----~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
..+|+++|+++.|.+.+-+- .+|++ ++.+|.+.- . ..+.|||++.+|+... ..+...|.+|+.|..
T Consensus 111 i~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP----ASAam~G~~VV~V~~ 186 (496)
T COG1003 111 IYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP----ASAAMAGFKVVVVKC 186 (496)
T ss_pred HHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh----hhHhhcCceEEEEec
Confidence 67899999999999965554 55553 334444432 1 3468999999999886 677788999999987
Q ss_pred C-----CHHHHHhhcCCCceEEEEeCCCCCccccc-cHHHHHHHHHHcCCEEEEeCCcCCcc--ccCccCCCCcEEEecc
Q 022194 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSA 198 (301)
Q Consensus 127 ~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~-~l~~l~~l~~~~~~~li~D~~~~~~~--~~~~~~~~~di~~~S~ 198 (301)
+ |+++|++++.+++.++++++|++ .|... ++.+|+++.|++|..+..|.+-.-.. ...|.+.|.|++=..+
T Consensus 187 ~~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNL 265 (496)
T COG1003 187 DENGNVDLDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNL 265 (496)
T ss_pred CCCCCccHHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeec
Confidence 5 89999999999999999999998 67775 69999999999999999999965433 3367888999999999
Q ss_pred cccccCCC---CceeeEEEEc
Q 022194 199 TKFIAGHS---DVMAGVLAVK 216 (301)
Q Consensus 199 sK~~~g~~---g~~~g~~~~~ 216 (301)
||+|..|- |.-+|-+..+
T Consensus 266 HKTF~iPHGGGGPG~GPvgVk 286 (496)
T COG1003 266 HKTFCIPHGGGGPGAGPVGVK 286 (496)
T ss_pred ccccccCCCCCCCCCCceehH
Confidence 99986542 2224555554
No 374
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.26 E-value=3.1e-10 Score=108.39 Aligned_cols=191 Identities=18% Similarity=0.204 Sum_probs=138.9
Q ss_pred eeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCC-------chHHHHHHHHHhhcCCC--ceEEecchH---
Q 022194 13 LMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGN-------PTRDALESLLAKLDKAD--RALCFTSGM--- 80 (301)
Q Consensus 13 ~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~-------~~~~~l~~~l~~~~~~~--~~i~~~sG~--- 80 (301)
+.+|- +..|++...|+++.+.....++ +...|.+|.. ...-+++..++++.|.+ ++-+...+|
T Consensus 80 ~~~fi-G~G~y~~~~P~vi~~~i~~~~~----~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~a 154 (954)
T PRK12566 80 WTSLI-GMGYHGTVTPTVILRNVLENPG----WYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAA 154 (954)
T ss_pred ccccc-cccccCCcCcHHHHHHHHhCch----hhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHH
Confidence 34454 5667888777877676666655 3445666632 22456778899999998 666777776
Q ss_pred HHHHHHHhccC-CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 022194 81 AALAAVTHLLG-TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 81 ~ai~~~~~~~~-~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~ 159 (301)
+|+.+..+..+ +..+|+|++..|+.+...++..++..|++++. +++++.+.+++.+|++++|+. .|.+.+++
T Consensus 155 EA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~ 227 (954)
T PRK12566 155 EAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAVDNLAAHAVFGALLQYPDT-HGEIRDLR 227 (954)
T ss_pred HHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cchhhcCCCCEEEEEEECCCC-ceEEccHH
Confidence 33433334333 25689999999999998888999999999875 344555666789999999987 79999999
Q ss_pred HHHHHHHHcCCEEEEeCC-cCCccccCccCCCCcEEEecccc-----cccCCCCceeeEEEEcch
Q 022194 160 KIAEMAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATK-----FIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~-~~~~~~~~~~~~~~di~~~S~sK-----~~~g~~g~~~g~~~~~~~ 218 (301)
+|++++|+.|.++++-.- .+.+.+..|.++|+||++++..- .|||| -.|++.++++
T Consensus 228 ~i~~~~h~~gal~~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP---~ag~~a~~~~ 289 (954)
T PRK12566 228 PLIDQLHGQQALACVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGP---HAAYFACRDD 289 (954)
T ss_pred HHHHHHHHcCCEEEEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCC---CeeeeeehHH
Confidence 999999999988663322 35567778999999999986543 56555 3799998864
No 375
>PLN02452 phosphoserine transaminase
Probab=99.25 E-value=2.5e-10 Score=100.55 Aligned_cols=202 Identities=13% Similarity=0.062 Sum_probs=132.2
Q ss_pred HHHHHHHHHhhcCCC---ceEEe-cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEec------
Q 022194 57 RDALESLLAKLDKAD---RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN------ 125 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~-~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~------ 125 (301)
.+++++.|.++++.+ +++++ +|||.++. +++.++.+|+++++....+.+- -+...++.+|...+...
T Consensus 54 ~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~--r~~~~a~~~g~~~~~~~~~~~~~ 131 (365)
T PLN02452 54 IQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSK--KAAKEAKKYCKTNVIASGKDEKY 131 (365)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHH--HHHHHHHHhCCCcEEEecCCCCC
Confidence 678888899999864 45665 45578885 6677888999888766544433 23455666665333331
Q ss_pred --CCCHHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccc
Q 022194 126 --TCDLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (301)
Q Consensus 126 --~~d~~~l~~~l~~~~~~v~i~~~~np~G~~-~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~ 201 (301)
..++++++ .+++.+.|.+++..+.+|.. .|++++.+ +++|+|.+.+.+..+ +....++ ++.|.+|+
T Consensus 132 ~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~~~~v--~~~saqK~ 201 (365)
T PLN02452 132 TKIPSVSEWE--LTPDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVSKYGV--IYAGAQKN 201 (365)
T ss_pred CCCCChHHcC--CCCCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHHHcCE--EEEecccc
Confidence 11344432 23568899999999999995 78877753 899999999988765 3444455 44699999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHH-----------hhhh-cCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYF-----------LQNA-EGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQK 263 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~ 263 (301)
+ ||+|+ |+++.+++.+.+ ... ..+. ..++.+....+++..++++ ++.+.++..++++.
T Consensus 202 l-GP~Gl--~~v~vr~~~l~~-~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~ 277 (365)
T PLN02452 202 V-GPSGV--TIVIIRKDLIGN-ARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADL 277 (365)
T ss_pred c-CCCCe--EEEEEcHHHHhh-cccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 9 69985 888888665422 111 0011 1134444445555444443 44566778888889
Q ss_pred HHHHHHhCCCc
Q 022194 264 IAEFLASHPRV 274 (301)
Q Consensus 264 l~~~l~~~~~v 274 (301)
+.+.|++.+++
T Consensus 278 l~~~l~~~~G~ 288 (365)
T PLN02452 278 LYDAIDESNGF 288 (365)
T ss_pred HHHHHHhCCCc
Confidence 99999886654
No 376
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.18 E-value=2.5e-09 Score=91.43 Aligned_cols=160 Identities=17% Similarity=0.166 Sum_probs=95.7
Q ss_pred HHHHHHHHHhhcCCC-ceEEe-cchH-HHHH-HHHh-c----c---CC-----CCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 57 RDALESLLAKLDKAD-RALCF-TSGM-AALA-AVTH-L----L---GT-----GEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~-~sG~-~ai~-~~~~-~----~---~~-----g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
.-++++..++++|.+ +.+++ ++.+ ..+. ++.. + . +| .-+.|++.|.|..+. .+++.+|+
T Consensus 71 ipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF----ai~E~~Gi 146 (425)
T PF12897_consen 71 IPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF----AITEHFGI 146 (425)
T ss_dssp -HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH----HHHHHCT-
T ss_pred hHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH----HHHHhhCc
Confidence 778888899999887 44444 3333 3232 3322 1 1 11 235789999998776 88899999
Q ss_pred EEEEecCC----CHHHHHhhcC--CCceEEEEe-CCCCCccccccHHHHHHHH----HHcCCEEEEeCCcCCcccc-C-c
Q 022194 120 VVKRVNTC----DLDEVASAIG--PWTKLVWVE-SPTNPRQQICDIRKIAEMA----HAHGALLLVDNSIMSPVLS-R-P 186 (301)
Q Consensus 120 ~~~~~~~~----d~~~l~~~l~--~~~~~v~i~-~~~np~G~~~~l~~l~~l~----~~~~~~li~D~~~~~~~~~-~-~ 186 (301)
+.+.|++. |+|.+|+.+. +.+|.|+.. --+||||..+.=+.+.+++ ...+..|+.|++|....+. . +
T Consensus 147 emi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~ 226 (425)
T PF12897_consen 147 EMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEP 226 (425)
T ss_dssp EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS
T ss_pred EEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeecccccc
Confidence 99999975 8999999983 678888765 6689999998755555554 3579999999999876551 1 1
Q ss_pred c--------------CCCCcEEEecccccccCCCCceeeEEEEcchhHHH
Q 022194 187 L--------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (301)
Q Consensus 187 ~--------------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~ 222 (301)
. .-+..+.+.|+||....++| .+++.++.+.+..
T Consensus 227 ~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG--va~~aaS~~Nl~~ 274 (425)
T PF12897_consen 227 RDALLNILDACAKAGNPDRVYVFASTSKITFPGAG--VAFFAASEANLAW 274 (425)
T ss_dssp ------HHHHHHHTT-TTSEEEEEESTTTS-TTSS---EEEEE-HHHHHH
T ss_pred chhhhHHHHHHHHcCCCCeEEEEecccccccCCcc--eeeeecCHHHHHH
Confidence 0 11356999999997655555 5888888665533
No 377
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.13 E-value=3.9e-09 Score=92.22 Aligned_cols=203 Identities=11% Similarity=0.016 Sum_probs=128.6
Q ss_pred HHHHHHHHHhhcCCC---ceEEecc-hHHHHH-HHHhccCCCCeEE-EcCCCCccHHHHHhhhcccCCcEEEEecC----
Q 022194 57 RDALESLLAKLDKAD---RALCFTS-GMAALA-AVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~s-G~~ai~-~~~~~~~~g~~Vl-v~~~~y~~~~~~~~~~~~~~g~~~~~~~~---- 126 (301)
.+++++.|+++++.+ +++++++ ||.+.. +.+.++.+||+++ +....+.+. -|...++.+| .+..+..
T Consensus 51 ~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~--r~~~ea~~~g-~v~~~~~~~~~ 127 (364)
T PRK12462 51 LAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSR--KAIGEASRVA-AMRVVWDGAAS 127 (364)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHH--HHHHHHHhcC-CceEecCcCCC
Confidence 677888899999874 4666655 467775 6677889999665 333333322 2335555555 3333321
Q ss_pred -----CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEeccccc
Q 022194 127 -----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKF 201 (301)
Q Consensus 127 -----~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~ 201 (301)
.+++++ .++++.+.|.+++..+.+|...+ ++.+.+++++|+|.+.+.+..+-..+ ..|+++.+.+|.
T Consensus 128 ~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~-~~dvi~agsQKn 199 (364)
T PRK12462 128 GYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVE-AYGMVYAHAQKN 199 (364)
T ss_pred CCCcCCCHHHh--ccCCCCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChH-HccEEEeecccc
Confidence 133443 23356788999999999999986 33334689999999988766543222 239999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHH----------Hhhh-hcCCCCCHHhHHHHHcccccH-------HHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELY----------FLQN-AEGSGLAPFDCWICLRGVKTM-------ALRVEKQQDNAQK 263 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~ 263 (301)
++ |+|+ ++++.+++.+.+.-. .... ...++++....+.+...++++ +.+.++..+.++.
T Consensus 200 lg-P~Gl--tvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ 276 (364)
T PRK12462 200 LG-PAGV--TVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAM 276 (364)
T ss_pred CC-CCce--EEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 95 9885 788888765422111 0011 122445555555554454443 4456777888888
Q ss_pred HHHHHHhCCC
Q 022194 264 IAEFLASHPR 273 (301)
Q Consensus 264 l~~~l~~~~~ 273 (301)
+.+.+.+.++
T Consensus 277 ly~~id~~~~ 286 (364)
T PRK12462 277 LYATLDALNE 286 (364)
T ss_pred HHHHHHhCCC
Confidence 8888887653
No 378
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.02 E-value=1.9e-08 Score=85.15 Aligned_cols=213 Identities=23% Similarity=0.226 Sum_probs=128.2
Q ss_pred CCchHHHHHHHH----HhhcCCC---ce--EEecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHH-HhhhcccCCcEE
Q 022194 53 GNPTRDALESLL----AKLDKAD---RA--LCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRL-LSRVTPKTGVVV 121 (301)
Q Consensus 53 g~~~~~~l~~~l----~~~~~~~---~~--i~~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~-~~~~~~~~g~~~ 121 (301)
|+...++++... -+.|+.+ .. +=.-||+.|. .+..++++|+++|.--+.-.+++... +..-.+.....-
T Consensus 80 Gne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~S 159 (477)
T KOG2467|consen 80 GNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATS 159 (477)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeee
Confidence 555566666443 3557765 22 2335777665 67788999999998555433333211 000001111111
Q ss_pred EEe-------cC----CCHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCC-----cccc
Q 022194 122 KRV-------NT----CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS-----PVLS 184 (301)
Q Consensus 122 ~~~-------~~----~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~-----~~~~ 184 (301)
++. +. .|-|.||+... -.+++|+.-...++ ...|.+++.++|.+.|+++.+|.+|.. +..+
T Consensus 160 iyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~--R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vip 237 (477)
T KOG2467|consen 160 IYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAYS--RLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIP 237 (477)
T ss_pred eecccCceeeCCCCCceehHHHHHHHHhcCCcEEEeccccch--hhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCC
Confidence 111 11 17788876554 46777765433333 467899999999999999999999854 4566
Q ss_pred CccCCCCcEEEecccccccCCCCceeeEEEEcchh--------------HHHHHHHhhh--hcC----CCCCHHhHHHHH
Q 022194 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER--------------LAKELYFLQN--AEG----SGLAPFDCWICL 244 (301)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~--------------~~~~~~~~~~--~~~----~~~~~~~~~~~~ 244 (301)
+|.++ +||++.+.||++-|| |+|.|..++-. +.+++..... ..| .+....+.++..
T Consensus 238 sPFey-~DiVTTTTHKsLRGP---Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQ 313 (477)
T KOG2467|consen 238 SPFEY-CDIVTTTTHKSLRGP---RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQ 313 (477)
T ss_pred Ccccc-cceeeccccccccCC---cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHh
Confidence 77776 899999999999887 56888776410 1121111110 000 111222222222
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 245 RGVKTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 245 ~~l~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..-..+.++.++..+|++.+.+.|.++
T Consensus 314 a~tpefk~Yq~qV~~Nakala~~l~~~ 340 (477)
T KOG2467|consen 314 AMTPEFKEYQKQVLKNAKALASALISR 340 (477)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 233457888899999999999999875
No 379
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.01 E-value=1.2e-08 Score=87.82 Aligned_cols=224 Identities=14% Similarity=0.149 Sum_probs=143.2
Q ss_pred CCCccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecchH-HHHHHHHhc----cC----CC-----CeE-EEcCCCC
Q 022194 44 NGPYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSGM-AALAAVTHL----LG----TG-----EEI-VAGDDLY 103 (301)
Q Consensus 44 ~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG~-~ai~~~~~~----~~----~g-----~~V-lv~~~~y 103 (301)
...+.|... .-.. ..++-..+.++.|-+ +.++.++|+ +.++++... .. .| +-| ..++-+|
T Consensus 128 tn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesH 207 (510)
T KOG0629|consen 128 TNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESH 207 (510)
T ss_pred CCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccch
Confidence 345555432 2222 455666666776554 688888887 545544321 11 11 234 4666788
Q ss_pred ccHHHHHhhhcccCC---cEEEEecCC-----CHHHHHhhcC---CC---ceEEEEeCCCCCccccccHHHHHHHHHHcC
Q 022194 104 GGTDRLLSRVTPKTG---VVVKRVNTC-----DLDEVASAIG---PW---TKLVWVESPTNPRQQICDIRKIAEMAHAHG 169 (301)
Q Consensus 104 ~~~~~~~~~~~~~~g---~~~~~~~~~-----d~~~l~~~l~---~~---~~~v~i~~~~np~G~~~~l~~l~~l~~~~~ 169 (301)
+++.. .+...| -.++.++.+ .+++||+.+. .+ +..|-.+...+-.|.+.|+..|+++|++|+
T Consensus 208 YSi~k----aAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~ 283 (510)
T KOG0629|consen 208 YSIKK----AAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHK 283 (510)
T ss_pred hhHHH----HHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcC
Confidence 87763 333333 455556654 6788887774 22 566666777888899999999999999999
Q ss_pred CEEEEeCCcCCccccCcc-------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh------------
Q 022194 170 ALLLVDNSIMSPVLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA------------ 230 (301)
Q Consensus 170 ~~li~D~~~~~~~~~~~~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~------------ 230 (301)
.|+++|.+++.|.+-... -..++.+.-+.||+++.| ++.+.++.+.+.+..+.......
T Consensus 284 lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gap--lqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS 361 (510)
T KOG0629|consen 284 LWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAP--LQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVS 361 (510)
T ss_pred EEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCc--chhhHHHHHHHHHHHhhcccchhhhhccCceeecc
Confidence 999999999987653211 113678999999999765 46677777766554433221110
Q ss_pred ---------cCCCCCHHhHHHHH--cccccHHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 231 ---------EGSGLAPFDCWICL--RGVKTMALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 231 ---------~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
.|.-...+-.|.+. ++..-+++.+++..++++++.+.|++.++
T Consensus 362 ~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~ 415 (510)
T KOG0629|consen 362 YDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG 415 (510)
T ss_pred cccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 11122333355553 34555788899999999999999998654
No 380
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.96 E-value=1e-08 Score=89.28 Aligned_cols=217 Identities=17% Similarity=0.177 Sum_probs=143.5
Q ss_pred HHHHHHHHhhcCCCce---EEecchHHHHHHH-Hh---c-cC-CC---CeEEEcCCCCccHHHHHhhhcccCCcEEEEec
Q 022194 58 DALESLLAKLDKADRA---LCFTSGMAALAAV-TH---L-LG-TG---EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (301)
Q Consensus 58 ~~l~~~l~~~~~~~~~---i~~~sG~~ai~~~-~~---~-~~-~g---~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~ 125 (301)
.+.-.-++.+++.++. ..+++||+++.+. .. . .. .| -+++++... ...|++..+.++++++.++
T Consensus 123 ~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v----~~a~eK~a~yf~v~l~~V~ 198 (491)
T KOG1383|consen 123 AECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNV----HAAFEKAARYFEVELREVP 198 (491)
T ss_pred HHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHH----HHHHHHHHhhEEEEEEeee
Confidence 3444556777766532 2345567774322 11 1 11 11 123333333 3345688889999999999
Q ss_pred CC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH-cCCEEEEeCCcCCcccc----Ccc-----CC
Q 022194 126 TC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA-HGALLLVDNSIMSPVLS----RPL-----EL 189 (301)
Q Consensus 126 ~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~-~~~~li~D~~~~~~~~~----~~~-----~~ 189 (301)
.+ |+..+.+.+++++.+++.+-|+.|+|.+.++++|.++..+ +++.+++|.+-+..+.+ ... ..
T Consensus 199 ~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p 278 (491)
T KOG1383|consen 199 LDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVP 278 (491)
T ss_pred ccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCC
Confidence 76 8999999999999999999999999999999999999998 99999999998866552 111 12
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHH-HHHHhhhhcC------------CCCCHHhHHHHHccc--ccHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-ELYFLQNAEG------------SGLAPFDCWICLRGV--KTMALRV 254 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~l--~~~~~~~ 254 (301)
+..-...+.||+-..|+|. ++++.+.+.+.. ++..-....| .+.....+|+.+-.+ +-+.+..
T Consensus 279 ~V~Sisa~~HKYGl~~~G~--~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~ 356 (491)
T KOG1383|consen 279 GVTSISADGHKYGLAPAGS--SWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENT 356 (491)
T ss_pred CceeEeeccceeeeeecCc--EEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHH
Confidence 3456677789986678874 666666554422 2111111111 222334466654433 4477888
Q ss_pred HHHHHHHHHHHHHHHhCCCcceEecC
Q 022194 255 EKQQDNAQKIAEFLASHPRVKKVNYA 280 (301)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~v~~v~~p 280 (301)
++..++++.+++.+++.+.+..+.-|
T Consensus 357 ~~ive~~~~l~egie~i~~i~i~gkp 382 (491)
T KOG1383|consen 357 QNIVETARKLREGIENIKGIKIVGKP 382 (491)
T ss_pred HHHHHHHHHHHHhhhccccceecCCC
Confidence 99999999999999998776544433
No 381
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.85 E-value=4.6e-09 Score=94.65 Aligned_cols=174 Identities=20% Similarity=0.277 Sum_probs=126.6
Q ss_pred CCCCCCccccCeeecceeecCCCCCCCCccccCCCCch-HHHHH------HHHHhhcCCC--ceEEecchHHHHH-H-HH
Q 022194 19 EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPT-RDALE------SLLAKLDKAD--RALCFTSGMAALA-A-VT 87 (301)
Q Consensus 19 ~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~-~~~l~------~~l~~~~~~~--~~i~~~sG~~ai~-~-~~ 87 (301)
+-.|++...|+++.+..+..+. +..+|.+|..+. +-+|+ .-++++.|.+ ++-++..||+|-. + +.
T Consensus 124 GmGYyn~~vP~~I~RNilenp~----W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~ 199 (1001)
T KOG2040|consen 124 GMGYYNTHVPAVILRNILENPG----WYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALC 199 (1001)
T ss_pred ccccccccCcHHHHHHhhhCCc----ceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHHHH
Confidence 4569999999999999888777 566788874322 44444 4466777776 6778888885543 2 22
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~ 167 (301)
.-..++++.++...+|+....+.+..++.+|+++...+.. +.. ...++...+++..|.. -|.+.+..++++++++
T Consensus 200 ~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~---~~~-~s~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~ 274 (1001)
T KOG2040|consen 200 NRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIK---EAD-YSSKDVSGVLVQYPDT-EGSVLDFDELVELAHA 274 (1001)
T ss_pred HhhcccceEEecCCCCcchhhhhhccccccceeEEecCHH---Hhh-ccccceeEEEEEcCCC-CCcccCHHHHHHHhhc
Confidence 2244456799999999999888877788888886554422 221 1225688999999988 6999999999999999
Q ss_pred cCCEEEEeCC-cCCccccCccCCCCcEEEeccccc
Q 022194 168 HGALLLVDNS-IMSPVLSRPLELGADIVMHSATKF 201 (301)
Q Consensus 168 ~~~~li~D~~-~~~~~~~~~~~~~~di~~~S~sK~ 201 (301)
.+..+++-.- .+...+..|.++|+||+++|...+
T Consensus 275 ~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 275 NGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred cCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 9987665443 344556678899999999997764
No 382
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.82 E-value=6.2e-08 Score=81.92 Aligned_cols=203 Identities=18% Similarity=0.222 Sum_probs=112.1
Q ss_pred HHHHHHHHHhhc---C-C---CceEEecchH-HHHH-HHHhccCC------CCeEEEcCCCCccHHHHHhhhcccCCcEE
Q 022194 57 RDALESLLAKLD---K-A---DRALCFTSGM-AALA-AVTHLLGT------GEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (301)
Q Consensus 57 ~~~l~~~l~~~~---~-~---~~~i~~~sG~-~ai~-~~~~~~~~------g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~ 121 (301)
..+|++.|.++. | + +.-|++++|+ +.+. ++.++... .-.|+...|.|+.+.... ..+.....+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt-~~f~s~~y~w 123 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQT-DFFDSRLYKW 123 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHC-CCT-BTTEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHH-HhccccCccc
Confidence 677888877775 2 1 2577888885 6664 45554221 237899999999886432 3333322222
Q ss_pred EEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEecccc
Q 022194 122 KRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATK 200 (301)
Q Consensus 122 ~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK 200 (301)
-. |.......-.+.+-+=++++||||.|.+-. .+++.-+..+|.|-+|-.+.+.. ....+-|+.++|+||
T Consensus 124 --~G--da~~~~~~~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~SK 194 (363)
T PF04864_consen 124 --AG--DASNFKNSDNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTLSK 194 (363)
T ss_dssp --EE--ECCCGTT-S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEEEHHH
T ss_pred --cc--cHHhhccCCCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCCCCCCceEEEEEec
Confidence 11 222221111123334488999999998731 12244567789999998877642 333467999999999
Q ss_pred cccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccH--------------HHHHHHHHHHHHHHHH
Q 022194 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--------------ALRVEKQQDNAQKIAE 266 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------~~~~~~~~~~~~~l~~ 266 (301)
.- |.+|-|.||.+.+++.+.+++.......+.+.+-..+..+++-++.+ +--.+.+.++=++|++
T Consensus 195 ~T-GHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~ 273 (363)
T PF04864_consen 195 LT-GHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRA 273 (363)
T ss_dssp HC-S-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred cc-CccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHH
Confidence 97 89999999999999999998887777777777777665554444332 1122344455556666
Q ss_pred HHHh
Q 022194 267 FLAS 270 (301)
Q Consensus 267 ~l~~ 270 (301)
.+.+
T Consensus 274 ~~~~ 277 (363)
T PF04864_consen 274 AVSA 277 (363)
T ss_dssp HHCC
T ss_pred HHHh
Confidence 6654
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.75 E-value=1.3e-07 Score=81.90 Aligned_cols=129 Identities=14% Similarity=0.103 Sum_probs=86.4
Q ss_pred CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--------CHHHHHhhcC---CCceEEEEeCCCCCcccccc-H
Q 022194 91 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIG---PWTKLVWVESPTNPRQQICD-I 158 (301)
Q Consensus 91 ~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--------d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~-l 158 (301)
..++.|+.+.-.+.+.. ..+...|.+++.++.. |++.++++++ ++..+.++++++...+...| +
T Consensus 99 ~~a~~Viw~ridqkSc~----kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i 174 (389)
T PF05889_consen 99 PKAKYVIWPRIDQKSCF----KAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDI 174 (389)
T ss_dssp CT--EEEEEEEETHHHH----HHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----H
T ss_pred cCCceEEEeeccccchH----HHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccH
Confidence 35788888888887766 5556778888888842 5667776665 46677788888877888887 9
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCccc------cCccCCC-CcEEEecccccccCCCCceeeEEEEcchhHHHHHH
Q 022194 159 RKIAEMAHAHGALLLVDNSIMSPVL------SRPLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~~~~~~------~~~~~~~-~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~ 225 (301)
++|+++|++||++.++-.+|+.-.. ......| .|+++.|+.|.|-.|-| ++.+++.++.....+.
T Consensus 175 ~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvG--gai~As~~~~~i~~vs 246 (389)
T PF05889_consen 175 EEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVG--GAIMASFDPSGILAVS 246 (389)
T ss_dssp HHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESS--HEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecCC--CcEEEecCHHHHHHHH
Confidence 9999999999999999999996211 1111223 58999999998877755 5666666666655433
No 384
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.72 E-value=7.5e-07 Score=75.54 Aligned_cols=213 Identities=19% Similarity=0.135 Sum_probs=136.0
Q ss_pred CCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhcc-----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 53 GNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLL-----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~-----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
|+.....|++...+.||.+..+-+..|..|-. .+-.++ .||.+.+++++.|..+.+ ...+..|..++.++.
T Consensus 77 gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr---~h~~~ng~~~~n~~~ 153 (471)
T COG3033 77 GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTR---GHIQINGATPRNVYV 153 (471)
T ss_pred ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchh---HHHHhcCCccccccc
Confidence 55568889999999999988888888864432 222222 356666677777766653 555666666665553
Q ss_pred C---------------CHHHHHhhcC----CCceEEEEeCCCCCcccc----ccHHHHHHHHHHcCCEEEEeCCcCC-cc
Q 022194 127 C---------------DLDEVASAIG----PWTKLVWVESPTNPRQQI----CDIRKIAEMAHAHGALLLVDNSIMS-PV 182 (301)
Q Consensus 127 ~---------------d~~~l~~~l~----~~~~~v~i~~~~np~G~~----~~l~~l~~l~~~~~~~li~D~~~~~-~~ 182 (301)
+ |++.+++.++ +++..|+++-.+|..|.. .++++..++|++|++.++.|.+... -.
T Consensus 154 ~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENa 233 (471)
T COG3033 154 DEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENA 233 (471)
T ss_pred cccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhh
Confidence 2 7888888887 467788777667765554 3699999999999999999998531 11
Q ss_pred cc---C-cc-------------CCCCcEEEecccccccCCCCceeeEEEEcchhH---HHHHHHhhhh-----cCCCCCH
Q 022194 183 LS---R-PL-------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERL---AKELYFLQNA-----EGSGLAP 237 (301)
Q Consensus 183 ~~---~-~~-------------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~---~~~~~~~~~~-----~~~~~~~ 237 (301)
+. . +. -.-+|-++.|.-|---.+ ++|+++.+++.+ ...++..... +-.+++.
T Consensus 234 YFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvn---mGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~G 310 (471)
T COG3033 234 YFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVN---MGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAG 310 (471)
T ss_pred hhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceec---cccEEEecCccHHHHHHHHHhheEeeccccccCcccc
Confidence 11 0 00 013688888888853233 579999998853 3333322211 1134444
Q ss_pred HhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 238 FDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 238 ~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
....++..++..- ...++...+..++|.+.|.+.
T Consensus 311 rdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 311 RDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred hhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 4444444444431 334456667778888988874
No 385
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.65 E-value=2.4e-06 Score=71.13 Aligned_cols=133 Identities=17% Similarity=0.170 Sum_probs=89.9
Q ss_pred ecchHHHHH----HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC----cEEEEecCC----CHHHHHhhcCCCc--e
Q 022194 76 FTSGMAALA----AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG----VVVKRVNTC----DLDEVASAIGPWT--K 141 (301)
Q Consensus 76 ~~sG~~ai~----~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g----~~~~~~~~~----d~~~l~~~l~~~~--~ 141 (301)
.-|||.|+. .+.+++. ...|.+++|.+..+. .+++..| ..+.+++.+ |.+.+.+.++..+ .
T Consensus 105 slsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~----~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~s 179 (410)
T KOG1412|consen 105 SLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHH----AIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGS 179 (410)
T ss_pred eccccchhhhhHHHHHHhcc-cceeEecCCchhHHH----HHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCc
Confidence 456776663 2333444 567999999999987 4445555 233444433 7888888777432 3
Q ss_pred EEEEe-CCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCccccCcc----------CCCC-cEEEecccccccCCC
Q 022194 142 LVWVE-SPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSRPL----------ELGA-DIVMHSATKFIAGHS 206 (301)
Q Consensus 142 ~v~i~-~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~----------~~~~-di~~~S~sK~~~g~~ 206 (301)
++++. ..+||||.-+ ...+|+++.++.+.+.+.|-+|-..+.+++. +.|. -+++-||+|.| |.-
T Consensus 180 i~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNf-GlY 258 (410)
T KOG1412|consen 180 IIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNF-GLY 258 (410)
T ss_pred EEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhc-ccc
Confidence 44444 4599999875 3788999999999999999998655544432 2343 48999999998 555
Q ss_pred CceeeEEE
Q 022194 207 DVMAGVLA 214 (301)
Q Consensus 207 g~~~g~~~ 214 (301)
+=|.|.+.
T Consensus 259 neRvGnlt 266 (410)
T KOG1412|consen 259 NERVGNLT 266 (410)
T ss_pred cccccceE
Confidence 55677653
No 386
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.46 E-value=1.7e-07 Score=77.49 Aligned_cols=180 Identities=16% Similarity=0.133 Sum_probs=102.6
Q ss_pred hcCCCceEEecchHHHHHHHHhcc----CCCCeEEEcCCCCccHHHHHhhh-----cccCC---cEEEEecCC-------
Q 022194 67 LDKADRALCFTSGMAALAAVTHLL----GTGEEIVAGDDLYGGTDRLLSRV-----TPKTG---VVVKRVNTC------- 127 (301)
Q Consensus 67 ~~~~~~~i~~~sG~~ai~~~~~~~----~~g~~Vlv~~~~y~~~~~~~~~~-----~~~~g---~~~~~~~~~------- 127 (301)
+-+..-.++++||++|..+.+++. +..| |++-+..||++....-.+ -+-.+ -+++.+.+.
T Consensus 99 lPeLsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK 177 (452)
T KOG1403|consen 99 LPELSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGK 177 (452)
T ss_pred CCCceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccc
Confidence 334445778899999987665553 3344 666688998875321111 01011 122222211
Q ss_pred ---------C-----HHHHHhhcC------CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-c-
Q 022194 128 ---------D-----LDEVASAIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-P- 181 (301)
Q Consensus 128 ---------d-----~~~l~~~l~------~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~- 181 (301)
| .+.+++.++ ..+.+.+-++-.+--|.+.| ++++++..|.+|.++|.||++.. |
T Consensus 178 ~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGR 257 (452)
T KOG1403|consen 178 FRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGR 257 (452)
T ss_pred cccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccc
Confidence 1 244555553 24455555666666677755 78899999999999999999742 2
Q ss_pred ---cccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh--hhcCCCCCHHhHHHHHcccccH
Q 022194 182 ---VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAPFDCWICLRGVKTM 250 (301)
Q Consensus 182 ---~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~ 250 (301)
.++....++....+.++.|.+|. |...+.++..+ ++.+.+.... .+-+.+-+|.+++..+.-++..
T Consensus 258 vG~hyWafq~y~fiPDIVtmgKpmGN--GhPVa~Vattk-eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~ 328 (452)
T KOG1403|consen 258 VGSHYWAFQTYNFIPDIVTMGKPMGN--GHPVAAVATTK-EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVC 328 (452)
T ss_pred cchhhhhhhhhccccchheecccCCC--CCeeeEEeccH-HHHHHhccccceehhccCCCchhHHHHHHHHHHH
Confidence 22333334444455569999854 34578887764 4555433221 1222345666676666655544
No 387
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.42 E-value=8.5e-06 Score=68.85 Aligned_cols=213 Identities=16% Similarity=0.132 Sum_probs=125.1
Q ss_pred cchHHHHH---HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC---C----CHHHHHhhcCC---CceEE
Q 022194 77 TSGMAALA---AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C----DLDEVASAIGP---WTKLV 143 (301)
Q Consensus 77 ~sG~~ai~---~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~---~~~~v 143 (301)
-|||.|+. .++...-++..|.+++|+|..+. .+....|+.+..+.. . |++.+.+-+.. ...++
T Consensus 127 lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~----~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~il 202 (427)
T KOG1411|consen 127 LSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHK----NIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIIL 202 (427)
T ss_pred ccCcchhhHHHHHHHhhccccceeecCCcccccC----ccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEE
Confidence 45666653 33444446889999999999886 677777877655442 2 66665555542 22333
Q ss_pred EEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCccccCcc----------CCC-CcEEEecccccccCCCCce
Q 022194 144 WVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSRPL----------ELG-ADIVMHSATKFIAGHSDVM 209 (301)
Q Consensus 144 ~i~~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~----------~~~-~di~~~S~sK~~~g~~g~~ 209 (301)
+-...|||||.-+ ..++|.++.++.+.+-++|.+|-....++.. +.| ..+++-|+.|.+ |.-|=|
T Consensus 203 LhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNM-GLYgER 281 (427)
T KOG1411|consen 203 LHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNM-GLYGER 281 (427)
T ss_pred eehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhc-chhhhc
Confidence 3357899999875 4788999999999999999998655444322 223 357889999998 444446
Q ss_pred eeEE--EEcchhHHHHHHHhhhh--cCCC-CCHHh-HHHH----------HcccccHHHHHHHHHHHHHHHHHHHHhCC-
Q 022194 210 AGVL--AVKGERLAKELYFLQNA--EGSG-LAPFD-CWIC----------LRGVKTMALRVEKQQDNAQKIAEFLASHP- 272 (301)
Q Consensus 210 ~g~~--~~~~~~~~~~~~~~~~~--~~~~-~~~~~-~~~~----------~~~l~~~~~~~~~~~~~~~~l~~~l~~~~- 272 (301)
.|.+ ++++.....++...... .+.. .+|.. +..+ .+++.++....+++...++.+.+.|+...
T Consensus 282 vGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs 361 (427)
T KOG1411|consen 282 VGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGS 361 (427)
T ss_pred cceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCC
Confidence 6655 44555544443332221 1111 11111 1111 11222334445666777777777776531
Q ss_pred ---------CcceEecCCCCCCcchHHHHhh
Q 022194 273 ---------RVKKVNYAGLPEHPGHELHYSQ 294 (301)
Q Consensus 273 ---------~v~~v~~p~~~~~~~~~~~~~~ 294 (301)
.+.-..+.|++......+.+++
T Consensus 362 ~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~ 392 (427)
T KOG1411|consen 362 PGNWSHITKQIGMFCFTGLNPEQVDWLTKEY 392 (427)
T ss_pred CccHHHHHHhhheeeecCCCHHHHHHHHhhh
Confidence 1222445666655555555544
No 388
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.35 E-value=1.1e-05 Score=73.53 Aligned_cols=210 Identities=23% Similarity=0.203 Sum_probs=137.1
Q ss_pred HHHHHHHHHhhcCCCceEEe-cchH----HHHHHHHhccC-CC----CeEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 57 RDALESLLAKLDKADRALCF-TSGM----AALAAVTHLLG-TG----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~-~sG~----~ai~~~~~~~~-~g----~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
..+|++.|+++.|.+..-+- +||. +.+.+|.+.+. +| ...+++-..|+... ..+...|.+++.+..
T Consensus 584 f~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNP----ASA~MagmkvvpV~~ 659 (1001)
T KOG2040|consen 584 FTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNP----ASAAMAGMKVVPVGC 659 (1001)
T ss_pred HHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCCh----hhHHhcCCEEEEeec
Confidence 56788999999999865553 5564 34556665543 22 34678888888775 667788899998886
Q ss_pred C-----CHHHHHhhcC---CCceEEEEeCCCCCccccc-cHHHHHHHHHHcCCEEEEeCCcCC--ccccCccCCCCcEEE
Q 022194 127 C-----DLDEVASAIG---PWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMS--PVLSRPLELGADIVM 195 (301)
Q Consensus 127 ~-----d~~~l~~~l~---~~~~~v~i~~~~np~G~~~-~l~~l~~l~~~~~~~li~D~~~~~--~~~~~~~~~~~di~~ 195 (301)
+ |..+|+++.. ++..+++++.|++ .|... .+++++++.++||.-+..|.+-.- -.+..+...|+|+.=
T Consensus 660 ~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~H 738 (1001)
T KOG2040|consen 660 DANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCH 738 (1001)
T ss_pred cCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCcccccccee
Confidence 5 7777776654 5788999999998 57775 499999999999999999999642 234567888999999
Q ss_pred ecccccccCCC---CceeeEEEEcchhHHHHHHHh--------------hhh----cCCC--CCHHhHHHHHcccccHHH
Q 022194 196 HSATKFIAGHS---DVMAGVLAVKGERLAKELYFL--------------QNA----EGSG--LAPFDCWICLRGVKTMAL 252 (301)
Q Consensus 196 ~S~sK~~~g~~---g~~~g~~~~~~~~~~~~~~~~--------------~~~----~~~~--~~~~~~~~~~~~l~~~~~ 252 (301)
-.+||+|.-|. |.-+|-+..++ .+...+-.- ... +|.. ++-.-++..+-+..-+.+
T Consensus 739 LNLHKTFcIPHGGGGPg~gPIgVK~-HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~ 817 (1001)
T KOG2040|consen 739 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKD 817 (1001)
T ss_pred ecccceeeecCCCCCCCCCccchhh-hccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccch
Confidence 99999874331 21234454432 222211100 000 1111 111112222333344455
Q ss_pred HHHHHHHHHHHHHHHHHhCC
Q 022194 253 RVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~ 272 (301)
.-+...-|+.++.++|+++=
T Consensus 818 as~~AiLNaNYMakRLe~hY 837 (1001)
T KOG2040|consen 818 ASKIAILNANYMAKRLESHY 837 (1001)
T ss_pred hhHHHhhhhHHHHHHHhhcc
Confidence 55677788899999998863
No 389
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.08 E-value=0.00016 Score=63.62 Aligned_cols=216 Identities=19% Similarity=0.276 Sum_probs=123.8
Q ss_pred CCchHHHHH----HHHHhhcCCC-----------ceEEecchHHHH-HHHHhc-------cCCC-----------C-eEE
Q 022194 53 GNPTRDALE----SLLAKLDKAD-----------RALCFTSGMAAL-AAVTHL-------LGTG-----------E-EIV 97 (301)
Q Consensus 53 g~~~~~~l~----~~l~~~~~~~-----------~~i~~~sG~~ai-~~~~~~-------~~~g-----------~-~Vl 97 (301)
..|...+|+ +|+++..+.+ -.++.++.+++. .++++. ++.+ + .+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 457777777 7888776543 356667776654 333331 2222 1 244
Q ss_pred EcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCC-----Cce-EEEEeCCCCCccccccHHHHHHHHH
Q 022194 98 AGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-----WTK-LVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 98 v~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~-----~~~-~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
.++-+|.+.. +.+...+++++.++.+ +.+.|++++.+ -+- .++.+-..+.+-...++.+|..+|+
T Consensus 187 ~SDqahssve----ka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 187 CSDQAHSSVE----KACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCR 262 (511)
T ss_pred ecCcccchHH----HhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhh
Confidence 6666766664 6667778888888876 45667666652 233 3343444444445568999999999
Q ss_pred HcCCEEEEeCCcCCccccCc----cCCC---CcEEEecccccccCCCCceeeEEEEcch-hHH-----HHHHHhhhh---
Q 022194 167 AHGALLLVDNSIMSPVLSRP----LELG---ADIVMHSATKFIAGHSDVMAGVLAVKGE-RLA-----KELYFLQNA--- 230 (301)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~~----~~~~---~di~~~S~sK~~~g~~g~~~g~~~~~~~-~~~-----~~~~~~~~~--- 230 (301)
++|+|+++|.+|+.+++..+ +..| +|-+-+..||++...-. ...+..++. .+. +.++.....
T Consensus 263 ~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfD--Cs~lWvkd~~~~~~~~~vdp~yL~h~~~~~ 340 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFD--CSPLWVKDGTKLSRAFNVDPLYLKHAYQGS 340 (511)
T ss_pred hcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeee--eecceeecCceeeeeeecChHhhcchhhcc
Confidence 99999999999987665422 2222 57788888998654322 223333322 110 001111111
Q ss_pred ----------cCCCCCHHhHHHHHc--ccccHHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 231 ----------EGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 231 ----------~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
.+...-..-.|..++ +.+.+++++++..+.++.+...+.+-+..
T Consensus 341 ~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~F 396 (511)
T KOG0628|consen 341 APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRF 396 (511)
T ss_pred CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 111112223344333 34456777778888888888877765544
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.95 E-value=7.9e-05 Score=62.24 Aligned_cols=141 Identities=13% Similarity=0.152 Sum_probs=100.3
Q ss_pred EecchHHHHH-HHHhccCC---CCeEEEcCCCCccHHHHHhhhcccCCcEEEE----ecCC------CHHHHHhhcC---
Q 022194 75 CFTSGMAALA-AVTHLLGT---GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR----VNTC------DLDEVASAIG--- 137 (301)
Q Consensus 75 ~~~sG~~ai~-~~~~~~~~---g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~----~~~~------d~~~l~~~l~--- 137 (301)
+.++=|..+. ++.++.+| .-+|+....+|++-.-.++..++..|+.+.. +.+. ..+++.+.+.
T Consensus 133 vmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkng 212 (465)
T KOG3846|consen 133 VMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNG 212 (465)
T ss_pred hHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcC
Confidence 3344455554 56677776 4578888888887665666666766664322 2221 2344444443
Q ss_pred CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCcc-CCCCcEEEecccccccCCCCceeeEEEE
Q 022194 138 PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFIAGHSDVMAGVLAV 215 (301)
Q Consensus 138 ~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~-~~~~di~~~S~sK~~~g~~g~~~g~~~~ 215 (301)
+.+.+|+++..+.-||...++.+|...-+..|+++=.|=+|..+-.+.-+ .+|.|+.|-...|++..++|-++|..+-
T Consensus 213 DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvH 291 (465)
T KOG3846|consen 213 DEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVH 291 (465)
T ss_pred CeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeee
Confidence 56888999999999999999999997777789999999999987655333 5699999999999887766655666654
No 391
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.65 E-value=0.00014 Score=55.93 Aligned_cols=57 Identities=18% Similarity=0.359 Sum_probs=44.0
Q ss_pred ccCC-CCch-HHHHHHHHHhhcC--C--C-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCcc
Q 022194 49 YTRS-GNPT-RDALESLLAKLDK--A--D-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGG 105 (301)
Q Consensus 49 y~~~-g~~~-~~~l~~~l~~~~~--~--~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~ 105 (301)
|..+ |.+. |+++.+++.+.+| . + +.|++++| ++++. ++..+++|||.|+++.|.|++
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 5555 7766 8999999998876 2 2 45666666 58885 667789999999999999974
No 392
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.59 E-value=0.00066 Score=58.35 Aligned_cols=199 Identities=17% Similarity=0.141 Sum_probs=112.8
Q ss_pred HHHHHHHHHhhcCCC---ceEEecch-HHHHH-HHHhccCCCCe--EEEcCCCCccHHHHHhhhcccCCcEEEEecC---
Q 022194 57 RDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHLLGTGEE--IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--- 126 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~-~~~~~~~~g~~--Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--- 126 (301)
..+.++.++++++.+ +++++.+| |.... +.+.++.++.. |.. ..|..... ..++..+......+.
T Consensus 52 ~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~--g~Ws~~a~---~eA~~~~~~~~~~~~~~~ 126 (365)
T COG1932 52 LEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDT--GAWSEFAI---KEAKKVGKQPKLIDARIE 126 (365)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEee--eehhHhHH---HHHHHhccccccccccee
Confidence 677888899999876 57777777 45564 55677766543 333 23332221 222233221111111
Q ss_pred -------CCHHHHHhhcCCCceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecc
Q 022194 127 -------CDLDEVASAIGPWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSA 198 (301)
Q Consensus 127 -------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~-l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~ 198 (301)
.+++... +.++...|.+++..+-+|...+ ...+. . +.++++|.+.......-.. ...|++.++.
T Consensus 127 ~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr~iDv-sk~dviyaga 198 (365)
T COG1932 127 EAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPELPDIG---S--DGLLVADASSAILSRPIDV-SKYDVIYAGA 198 (365)
T ss_pred ccCccCCCChhhcc--cCCCccEEEEecCCcccceEccCCCCCC---C--CceEEEecccHHhcCCCCh-hHcceEEEeh
Confidence 1222222 2334444777766666777654 12111 1 2889999987655543222 2468999999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHh-------------hhhcCCCCCHHhHHHHHccccc------HHHHHHHHHH
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFL-------------QNAEGSGLAPFDCWICLRGVKT------MALRVEKQQD 259 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~ 259 (301)
.|.+ ||.| .++++.+++.+.+ .... ....-++++.+..+.....+++ ++...++..+
T Consensus 199 QKnl-GpaG--ltvvIvr~~~l~r-~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ 274 (365)
T COG1932 199 QKNL-GPAG--LTVVIVRPDLLER-AESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQA 274 (365)
T ss_pred hhcc-Cccc--eEEEEEcHHHHhc-ccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999 7888 4888888665433 2211 0111244455554444333333 4667788888
Q ss_pred HHHHHHHHHHhCC
Q 022194 260 NAQKIAEFLASHP 272 (301)
Q Consensus 260 ~~~~l~~~l~~~~ 272 (301)
+++.|-+++.+.+
T Consensus 275 ka~~LY~~id~s~ 287 (365)
T COG1932 275 KAQLLYDWIDKSD 287 (365)
T ss_pred HHHHHHHHHHhCC
Confidence 8999999998753
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.12 E-value=0.0025 Score=54.57 Aligned_cols=73 Identities=22% Similarity=0.219 Sum_probs=48.8
Q ss_pred HHHHHhhcC------CCceEEEEeCCCCCccccc----cHHHHHHHHHHcCCEEEEeCCcCCcc----ccCc----cCCC
Q 022194 129 LDEVASAIG------PWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMSPV----LSRP----LELG 190 (301)
Q Consensus 129 ~~~l~~~l~------~~~~~v~i~~~~np~G~~~----~l~~l~~l~~~~~~~li~D~~~~~~~----~~~~----~~~~ 190 (301)
++++|+.+. ..+.+++++.....-|.-. -+..|.+++++||+.+|+||++..+. +..- ++.-
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 345555553 2466788887777777663 28899999999999999999986432 2221 2223
Q ss_pred CcEEEeccccccc
Q 022194 191 ADIVMHSATKFIA 203 (301)
Q Consensus 191 ~di~~~S~sK~~~ 203 (301)
.|++ +|||-|.
T Consensus 335 pD~v--TFSKK~q 345 (484)
T KOG1405|consen 335 PDVV--TFSKKFQ 345 (484)
T ss_pred ccce--ehhhhhh
Confidence 4555 5888774
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.18 E-value=0.045 Score=45.24 Aligned_cols=97 Identities=18% Similarity=0.173 Sum_probs=58.3
Q ss_pred CHHHHHhhcCC-CceEEEE--eCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCcccc------CccCCC-CcEEEe
Q 022194 128 DLDEVASAIGP-WTKLVWV--ESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLELG-ADIVMH 196 (301)
Q Consensus 128 d~~~l~~~l~~-~~~~v~i--~~~~np~G~~-~~l~~l~~l~~~~~~~li~D~~~~~~~~~------~~~~~~-~di~~~ 196 (301)
|++.+++.+.+ ....|+. +..+.-.-.. ..+++|+.+|..|+++-|+.++|+.-... ...+.| .|.++.
T Consensus 142 dleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vq 221 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQ 221 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHH
Confidence 67777777763 2332222 2111111122 34999999999999999999999853221 122333 588999
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYF 226 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~ 226 (301)
|+.|.|.-|-| ++++.+-++.+++.+..
T Consensus 222 sldknf~vpvg--gaiia~fk~n~iq~iak 249 (432)
T KOG3843|consen 222 SLDKNFMVPVG--GAIIAAFKDNFIQEIAK 249 (432)
T ss_pred Hhhhcceeecc--hhHhhHhHHHHHHHHHH
Confidence 99999977633 33444444556554433
No 395
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=88.57 E-value=2 Score=35.31 Aligned_cols=91 Identities=18% Similarity=0.213 Sum_probs=53.1
Q ss_pred hHHHHHHHHhccCCCCeEE-EcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 79 GMAALAAVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 79 G~~ai~~~~~~~~~g~~Vl-v~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
|..+-..+..+++++..|. +.++.-... ...++..|++++..+.+|.+.|.++++.- ..|++..+.........
T Consensus 8 G~~G~~v~~~L~~~~~~V~~l~R~~~~~~----~~~l~~~g~~vv~~d~~~~~~l~~al~g~-d~v~~~~~~~~~~~~~~ 82 (233)
T PF05368_consen 8 GNQGRSVVRALLSAGFSVRALVRDPSSDR----AQQLQALGAEVVEADYDDPESLVAALKGV-DAVFSVTPPSHPSELEQ 82 (233)
T ss_dssp SHHHHHHHHHHHHTTGCEEEEESSSHHHH----HHHHHHTTTEEEES-TT-HHHHHHHHTTC-SEEEEESSCSCCCHHHH
T ss_pred cHHHHHHHHHHHhCCCCcEEEEeccchhh----hhhhhcccceEeecccCCHHHHHHHHcCC-ceEEeecCcchhhhhhh
Confidence 4333344455555665554 333331111 13445679999999999999999999854 44444444332333444
Q ss_pred HHHHHHHHHHcCCEEEE
Q 022194 158 IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~ 174 (301)
...+++.|++.|+-.++
T Consensus 83 ~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 83 QKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHT-SEEE
T ss_pred hhhHHHhhhccccceEE
Confidence 67799999999986665
No 396
>PLN02672 methionine S-methyltransferase
Probab=85.04 E-value=23 Score=36.33 Aligned_cols=178 Identities=19% Similarity=0.128 Sum_probs=91.6
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHHHHHhccCCCCeEE---EcCCCCccHHHHHh----hhc
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALAAVTHLLGTGEEIV---AGDDLYGGTDRLLS----RVT 114 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~~~~~~~~~g~~Vl---v~~~~y~~~~~~~~----~~~ 114 (301)
.|.+. |... |.-+...+..+++. ++++++.+=..|+.-++++..|.-.++ +.......+...++ ...
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (1082)
T PLN02672 421 PCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPKKWLTSLAIENATSD 500 (1082)
T ss_pred CCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCHHHHhHhhhhccccc
Confidence 34443 4433 44444555555554 477788888888865555554421111 11111111111111 011
Q ss_pred cc--CCcEEEEecCCCHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCC---------cc
Q 022194 115 PK--TGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS---------PV 182 (301)
Q Consensus 115 ~~--~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~---------~~ 182 (301)
.. ..+.+++.|.. -+.+.+.+++ ++.+|+..-.....-+..-++.|.+.+++.|++++.|.+-.. |+
T Consensus 501 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (1082)
T PLN02672 501 SKSDDVITVIEAPRQ-SDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGV 579 (1082)
T ss_pred CccCCeEEEEeCCCc-chHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccH
Confidence 11 22334343333 2344555543 667777665555444445689999999999999999998321 11
Q ss_pred cc----CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh
Q 022194 183 LS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (301)
Q Consensus 183 ~~----~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~ 228 (301)
+. .+....+ .++..+-|.- --+.+-.++++.-++.+.+.+....
T Consensus 580 ~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1082)
T PLN02672 580 LKYLAGHPLPSHA-AIICGLVKNQ-VYSDLEVAFVISENEAVLKALSKTG 627 (1082)
T ss_pred HHHhcCCCCCcch-hHhhhhhhcc-ccccceEEEEecCcHHHHHHHHHHH
Confidence 11 1222222 3444466653 3356677888877666666554433
No 397
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=82.06 E-value=5.1 Score=34.80 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=71.1
Q ss_pred HHHHH-HHHhccCCCCeEEEcCC-CCc-cHHHHHhhhcccCCcEEEEecCC-C-----HHHHHhhcCCCceEEEEeCC--
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDD-LYG-GTDRLLSRVTPKTGVVVKRVNTC-D-----LDEVASAIGPWTKLVWVESP-- 148 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~-~y~-~~~~~~~~~~~~~g~~~~~~~~~-d-----~~~l~~~l~~~~~~v~i~~~-- 148 (301)
|..+. +...+.+.|.+|++... +|- +..+.++.+.++.|++++.-..- | .+.++.+..++..+|++...
T Consensus 153 TTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGR 232 (340)
T COG0552 153 TTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGR 232 (340)
T ss_pred HhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCccc
Confidence 56675 56667788888887653 221 22344567788899998885422 3 46677777789999998744
Q ss_pred -CCCccccccHHHHHHHHHHcC------CEEEEeCCcCCcc
Q 022194 149 -TNPRQQICDIRKIAEMAHAHG------ALLLVDNSIMSPV 182 (301)
Q Consensus 149 -~np~G~~~~l~~l~~l~~~~~------~~li~D~~~~~~~ 182 (301)
||-..-..+|+.|.+++++.. ++++.|..-+.-.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqna 273 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNA 273 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhH
Confidence 555555567899999998865 6777799977543
No 398
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=81.28 E-value=16 Score=29.54 Aligned_cols=93 Identities=20% Similarity=0.211 Sum_probs=56.6
Q ss_pred CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-CHHHHHhhcCCCceEEEEeCCC
Q 022194 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 71 ~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
..++++++|..|...+..+++.|-.|.+.+|....-. ....+.. .+.++.-. ..+++ ....+|+ ..++
T Consensus 10 k~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l---~~l~~~~--~i~~~~~~~~~~dl-----~~~~lVi-~at~ 78 (205)
T TIGR01470 10 RAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESEL---TLLAEQG--GITWLARCFDADIL-----EGAFLVI-AATD 78 (205)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHH---HHHHHcC--CEEEEeCCCCHHHh-----CCcEEEE-ECCC
Confidence 3688899999888888888888888877777665333 2333333 33333322 22333 2334444 3344
Q ss_pred CCccccccHHHHHHHHHHcCCEEE-EeCCc
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLL-VDNSI 178 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li-~D~~~ 178 (301)
++ ..-.+|.+.|++.++++. +|+..
T Consensus 79 d~----~ln~~i~~~a~~~~ilvn~~d~~e 104 (205)
T TIGR01470 79 DE----ELNRRVAHAARARGVPVNVVDDPE 104 (205)
T ss_pred CH----HHHHHHHHHHHHcCCEEEECCCcc
Confidence 32 223679999999998884 56653
No 399
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=80.66 E-value=7 Score=30.82 Aligned_cols=96 Identities=9% Similarity=0.130 Sum_probs=61.2
Q ss_pred ch-H-HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEe--cCCCHHHHHhhcCCCceEEEEeCCCCCcc
Q 022194 78 SG-M-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIGPWTKLVWVESPTNPRQ 153 (301)
Q Consensus 78 sG-~-~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~--~~~d~~~l~~~l~~~~~~v~i~~~~np~G 153 (301)
+| | +.+..+..+-..|.+|++..|....-.. -..+....|...... +.+++.++...+..++.+|++.-.+.-+
T Consensus 12 sGKS~eLi~~~~~~~~~~~~v~~~kp~~D~R~~-~~~I~s~~g~~~~~~~~~~~~~~~~~~~~~~~~dvI~IDEaQFf~- 89 (176)
T PF00265_consen 12 SGKSTELIRRIHRYEIAGKKVLVFKPAIDTRYG-EDKIVSHDGISLEAIVDPIDNLFEIIDILENDYDVIGIDEAQFFD- 89 (176)
T ss_dssp SSHHHHHHHHHHHHHHTT-EEEEEEESTSCCCC-SSEEEHTTSCEEEEESSEESSGGGGGGGCCTTCSEEEESSGGGST-
T ss_pred ChhHHHHHHHHHHHHhCCCeEEEEEecccCcCC-CCeEEecCCCcccccccchhhHHHHHHHhccCCCEEEEechHhhH-
Confidence 45 4 4445666665667788876664321100 003445566766666 4556777777777778999998777643
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCC
Q 022194 154 QICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 154 ~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
.++.++++.+.++|+.+++=.-
T Consensus 90 --~~i~~l~~~~~~~g~~Vi~~GL 111 (176)
T PF00265_consen 90 --EQIVQLVEILANKGIPVICAGL 111 (176)
T ss_dssp --TTHHHHHHHHHHTT-EEEEEEE
T ss_pred --HHHHHHHHHHHhCCCeEEEEee
Confidence 5678899999999999987544
No 400
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=80.37 E-value=4.2 Score=29.42 Aligned_cols=88 Identities=15% Similarity=0.176 Sum_probs=57.6
Q ss_pred HHHHhhhcccCCcEEEEecCC-CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc--CCEEEEeCCcCCcc
Q 022194 107 DRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPV 182 (301)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~--~~~li~D~~~~~~~ 182 (301)
...+...++..|.++..++.. +.+++.+.+. .++++|.++.... .......++++..|+. ++.+++=..+....
T Consensus 17 l~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~~--~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~ 94 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSMT--PNLPEAKRLARAIKERNPNIPIVVGGPHATAD 94 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESSS--THHHHHHHHHHHHHTTCTTSEEEEEESSSGHH
T ss_pred HHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccCc--CcHHHHHHHHHHHHhcCCCCEEEEECCchhcC
Confidence 344567788889999999766 5677766654 6788888765433 3456678888888876 67888877665433
Q ss_pred ccCccC--CCCcEEEe
Q 022194 183 LSRPLE--LGADIVMH 196 (301)
Q Consensus 183 ~~~~~~--~~~di~~~ 196 (301)
....++ .+.|.++.
T Consensus 95 ~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 95 PEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred hHHHhccCcCcceecC
Confidence 322222 46665553
No 401
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=80.19 E-value=15 Score=28.52 Aligned_cols=87 Identities=21% Similarity=0.214 Sum_probs=56.0
Q ss_pred EecchH--HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCc
Q 022194 75 CFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPR 152 (301)
Q Consensus 75 ~~~sG~--~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~ 152 (301)
++.+|+ -+-.++..+++.|-+|....-.-.... . ..++++...+..|.+.+.+++. ...+|+.+.+..+.
T Consensus 2 ~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~-~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 2 LVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALK-GADAVIHAAGPPPK 73 (183)
T ss_dssp EEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHT-TSSEEEECCHSTTT
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhh-hcchhhhhhhhhcc
Confidence 444444 444567777777777764433322221 2 6788999999999999999998 45555555433322
Q ss_pred cccccHHHHHHHHHHcCC
Q 022194 153 QQICDIRKIAEMAHAHGA 170 (301)
Q Consensus 153 G~~~~l~~l~~l~~~~~~ 170 (301)
.....+.+.+.+++.++
T Consensus 74 -~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 74 -DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp -HHHHHHHHHHHHHHTTS
T ss_pred -ccccccccccccccccc
Confidence 34447788888888775
No 402
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=79.62 E-value=3.9 Score=35.30 Aligned_cols=102 Identities=24% Similarity=0.212 Sum_probs=63.0
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhh----cccCCcEEEEecCCCHHHHHhhcCC-CceEEE-
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRV----TPKTGVVVKRVNTCDLDEVASAIGP-WTKLVW- 144 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~- 144 (301)
.+++|+|..=+ ++.+.+++.|+.|++.++....+...+.+. .+..++.+...+..|.+.|++.++. +...|+
T Consensus 4 ~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~H 83 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMH 83 (343)
T ss_pred EEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEe
Confidence 46777776333 588889999999998888666655444333 2235578888888899999988873 333333
Q ss_pred E-------eCCCCCccccc----cHHHHHHHHHHcCCEEEE
Q 022194 145 V-------ESPTNPRQQIC----DIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 145 i-------~~~~np~G~~~----~l~~l~~l~~~~~~~li~ 174 (301)
+ .+..+|+-... -.-.+.+.++++|..-++
T Consensus 84 fa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V 124 (343)
T KOG1371|consen 84 FAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALV 124 (343)
T ss_pred ehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEE
Confidence 2 12223321111 123477778888754333
No 403
>PRK04296 thymidine kinase; Provisional
Probab=78.79 E-value=9.7 Score=30.32 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=52.6
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC---CCceEEEEeCCCCCcccccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~ 157 (301)
.++..+.++...|.+|++..|...... ....+....|+.+........+++.+.+. .+..+|++.-.+.-. ...
T Consensus 18 ~~l~~~~~~~~~g~~v~i~k~~~d~~~-~~~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~dvviIDEaq~l~--~~~ 94 (190)
T PRK04296 18 ELLQRAYNYEERGMKVLVFKPAIDDRY-GEGKVVSRIGLSREAIPVSSDTDIFELIEEEGEKIDCVLIDEAQFLD--KEQ 94 (190)
T ss_pred HHHHHHHHHHHcCCeEEEEeccccccc-cCCcEecCCCCcccceEeCChHHHHHHHHhhCCCCCEEEEEccccCC--HHH
Confidence 445567777777888887755322111 01245556665544322234444444432 367888888775411 112
Q ss_pred HHHHHHHHHHcCCEEEEeCC
Q 022194 158 IRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~ 177 (301)
+.++.+.++..|+.+|+=.-
T Consensus 95 v~~l~~~l~~~g~~vi~tgl 114 (190)
T PRK04296 95 VVQLAEVLDDLGIPVICYGL 114 (190)
T ss_pred HHHHHHHHHHcCCeEEEEec
Confidence 56777777888887777544
No 404
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=78.04 E-value=34 Score=29.10 Aligned_cols=102 Identities=16% Similarity=0.170 Sum_probs=57.0
Q ss_pred hcCCCceEEecchH-HHHHHHHhccCCCC--eEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCce
Q 022194 67 LDKADRALCFTSGM-AALAAVTHLLGTGE--EIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTK 141 (301)
Q Consensus 67 ~~~~~~~i~~~sG~-~ai~~~~~~~~~g~--~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~ 141 (301)
++...+.+++-+.+ .++..+....+.|. +|++.+ |.+.+... ..-+...|+++..+.....-.+.+. +.
T Consensus 106 ~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l--a~eL~~~GI~vtlI~Dsa~~~~m~~----vd 179 (275)
T PRK08335 106 LIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL--ANELEFLGIEFEVITDAQLGLFAKE----AT 179 (275)
T ss_pred HcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH--HHHHHHCCCCEEEEeccHHHHHHHh----CC
Confidence 33333555554444 44455555555443 566544 55555432 2445567899988885555555432 44
Q ss_pred EEEE-eCCCCCcccccc---HHHHHHHHHHcCCEEEE
Q 022194 142 LVWV-ESPTNPRQQICD---IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 142 ~v~i-~~~~np~G~~~~---l~~l~~l~~~~~~~li~ 174 (301)
.|++ ...-...|.+.. --.++-+||.|++++++
T Consensus 180 ~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 180 LALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred EEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 4544 222233444432 34578889999998887
No 405
>PLN00191 enolase
Probab=76.42 E-value=22 Score=32.73 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=64.6
Q ss_pred HHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--CCHHHHHhhcCCCc-eEEEEeCCCCCccccc
Q 022194 80 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPWT-KLVWVESPTNPRQQIC 156 (301)
Q Consensus 80 ~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--~d~~~l~~~l~~~~-~~v~i~~~~np~G~~~ 156 (301)
.+++..+..++.+-+.+.+.+|....-...|..+.+...+.+..=+. .+++++++.+..+. .+|.+. + |..|.+.
T Consensus 298 ~e~i~~~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iK-l-~qiGGIT 375 (457)
T PLN00191 298 DELIDLYKEFVSDYPIVSIEDPFDQDDWEHWAKLTSLEDVQIVGDDLLVTNPKRVAKAIQEKACNALLLK-V-NQIGTVT 375 (457)
T ss_pred HHHHHHHHHHhhcCCcEEEECCCCcccHHHHHHHHccCCCcEEccCcccCCHHHHHHHHHhCCCCEEEec-c-cccCCHH
Confidence 35556666667655667899998766566666666655444433332 36888888887544 344433 3 4479999
Q ss_pred cHHHHHHHHHHcCCEEEEeC
Q 022194 157 DIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~ 176 (301)
+..+++++|+++|+.+++-.
T Consensus 376 ea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 376 ESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred HHHHHHHHHHHCCCEEEeCC
Confidence 99999999999999888744
No 406
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=75.56 E-value=16 Score=30.97 Aligned_cols=88 Identities=13% Similarity=0.143 Sum_probs=52.5
Q ss_pred EEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC-----CC-ceEEEE
Q 022194 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-----PW-TKLVWV 145 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~-----~~-~~~v~i 145 (301)
++++++|..+ .++..+++.|.+|.+..-.-.. ....+++....+..|.+.+.++++ .. ...+++
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~--------~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSS--------SAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc--------ccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 4566666444 4556677777766543211110 112356666677788999988884 23 666766
Q ss_pred eCCCCCccccccHHHHHHHHHHcCC
Q 022194 146 ESPTNPRQQICDIRKIAEMAHAHGA 170 (301)
Q Consensus 146 ~~~~np~G~~~~l~~l~~l~~~~~~ 170 (301)
..+..+ ........+++.|++.|+
T Consensus 74 ~~~~~~-~~~~~~~~~i~aa~~~gv 97 (285)
T TIGR03649 74 VAPPIP-DLAPPMIKFIDFARSKGV 97 (285)
T ss_pred eCCCCC-ChhHHHHHHHHHHHHcCC
Confidence 655432 223456778888999886
No 407
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=75.24 E-value=15 Score=32.92 Aligned_cols=48 Identities=17% Similarity=0.282 Sum_probs=35.9
Q ss_pred CHHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 128 DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 128 d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
+.+.+.+.++ .+..+++++ .+--|.+.+.+.++++||+.|+++++|--
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVLS--DY~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVLS--DYAKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEEe--ccccccchhHHHHHHHHHHcCCcEEECCC
Confidence 3444444444 466777776 44468888899999999999999999965
No 408
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=74.91 E-value=25 Score=30.33 Aligned_cols=95 Identities=22% Similarity=0.207 Sum_probs=62.8
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEE----
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWV---- 145 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i---- 145 (301)
.+++++|..=| .++..+++.|..|++-+....++...+.... .++..-+..|-+.|.+.+.+ ++.+|+-
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~----~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ----FKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc----CceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 47788887444 4788888899999988888888764432211 56777777788888888873 5666653
Q ss_pred ----eCCCCCccccc----cHHHHHHHHHHcCCE
Q 022194 146 ----ESPTNPRQQIC----DIRKIAEMAHAHGAL 171 (301)
Q Consensus 146 ----~~~~np~G~~~----~l~~l~~l~~~~~~~ 171 (301)
++..+|.-... ---.|++.++++|+.
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 23334322111 144588889999863
No 409
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=74.49 E-value=10 Score=36.92 Aligned_cols=91 Identities=16% Similarity=0.101 Sum_probs=59.9
Q ss_pred chHHHHHHHHHhhcC-CCceE---Eecch-HHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 55 PTRDALESLLAKLDK-ADRAL---CFTSG-MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~-~~~~i---~~~sG-~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
+.+..+.+.+....+ ....+ +++|| |+.. .++...+..|..+|+--|.-.-....+..+-..+|.++..+...
T Consensus 201 ~~Q~~a~~~i~~~~~~~~~~Ll~GvTGSGKTEvYl~~i~~~L~~GkqvLvLVPEI~Ltpq~~~rf~~rFg~~v~vlHS~L 280 (730)
T COG1198 201 QEQQAAVEAILSSLGGFAPFLLDGVTGSGKTEVYLEAIAKVLAQGKQVLVLVPEIALTPQLLARFKARFGAKVAVLHSGL 280 (730)
T ss_pred HHHHHHHHHHHHhcccccceeEeCCCCCcHHHHHHHHHHHHHHcCCEEEEEeccccchHHHHHHHHHHhCCChhhhcccC
Confidence 444444444444432 33333 35677 5776 58888999999999888988888888877777888766655533
Q ss_pred -C---HHHHHhhcCCCceEEEE
Q 022194 128 -D---LDEVASAIGPWTKLVWV 145 (301)
Q Consensus 128 -d---~~~l~~~l~~~~~~v~i 145 (301)
+ .+.+.++...+.++|+-
T Consensus 281 s~~er~~~W~~~~~G~~~vVIG 302 (730)
T COG1198 281 SPGERYRVWRRARRGEARVVIG 302 (730)
T ss_pred ChHHHHHHHHHHhcCCceEEEE
Confidence 2 34556666667777763
No 410
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=72.99 E-value=61 Score=27.95 Aligned_cols=101 Identities=11% Similarity=0.127 Sum_probs=57.2
Q ss_pred ceEEecchHHHH-HHHHhccCCCC--eEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEE-
Q 022194 72 RALCFTSGMAAL-AAVTHLLGTGE--EIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV- 145 (301)
Q Consensus 72 ~~i~~~sG~~ai-~~~~~~~~~g~--~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i- 145 (301)
+.+++-+-+.++ ..+....+.|. +|++.+ |.+.+.. +.+.++..|+++..+..--.-.+ ++ +...|++
T Consensus 121 ~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~--~ak~L~~~gI~~~~I~Dsa~~~~---~~-~vd~VivG 194 (301)
T COG1184 121 DVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRI--MAKELRQSGIPVTVIVDSAVGAF---MS-RVDKVLVG 194 (301)
T ss_pred CEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHH--HHHHHHHcCCceEEEechHHHHH---HH-hCCEEEEC
Confidence 556665556555 56666666665 555543 6666553 34677888988888773222222 22 3333333
Q ss_pred eCCCCCcccccc---HHHHHHHHHHcCCEEEE-eCCc
Q 022194 146 ESPTNPRQQICD---IRKIAEMAHAHGALLLV-DNSI 178 (301)
Q Consensus 146 ~~~~np~G~~~~---l~~l~~l~~~~~~~li~-D~~~ 178 (301)
...-...|.+.. -..|+-.||+.++++++ =|+|
T Consensus 195 ad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesy 231 (301)
T COG1184 195 ADAILANGALVNKIGTSPLALAARELRVPFYVVAESY 231 (301)
T ss_pred ccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeee
Confidence 333333444433 45688899999986654 3344
No 411
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=71.91 E-value=39 Score=29.39 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=55.2
Q ss_pred CceEEecchHHH-HHHHHhccCCC--CeEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEE
Q 022194 71 DRALCFTSGMAA-LAAVTHLLGTG--EEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (301)
Q Consensus 71 ~~~i~~~sG~~a-i~~~~~~~~~g--~~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i 145 (301)
.+.+++-+.+.. ...+....+.| -+|++.+ |...+. .+..-+...|+++..+....+-.+.+ ++..|++
T Consensus 121 g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~--~~a~~L~~~GI~vtlI~Dsav~~~m~----~vd~Viv 194 (310)
T PRK08535 121 GDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGH--ITAKELAEYGIPVTLIVDSAVRYFMK----DVDKVVV 194 (310)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHH--HHHHHHHHCCCCEEEEehhHHHHHHH----hCCEEEE
Confidence 345555444533 34555554443 3555543 444442 22345567799999888554544443 3555554
Q ss_pred -eCCCCCcccccc---HHHHHHHHHHcCCEEEEe
Q 022194 146 -ESPTNPRQQICD---IRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 146 -~~~~np~G~~~~---l~~l~~l~~~~~~~li~D 175 (301)
...-...|.+.. -..++-+||.+++++++=
T Consensus 195 GAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 195 GADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred CccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 333344555543 345788899999988763
No 412
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=71.41 E-value=24 Score=28.62 Aligned_cols=123 Identities=15% Similarity=0.193 Sum_probs=68.8
Q ss_pred chHHHHHHHHHhhcCCCceEEecchH--HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc--EEEEecCCCHH
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLD 130 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~--~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~--~~~~~~~~d~~ 130 (301)
+...++-..+.+..++..++=+++++ +++..+..+- ++.+|+..+.. +......+..++..|. ++..+.-+-.+
T Consensus 31 ~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la~~l~-~~g~i~tiE~~-~~~~~~A~~~~~~ag~~~~I~~~~gda~~ 108 (205)
T PF01596_consen 31 PETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLAEALP-EDGKITTIEID-PERAEIARENFRKAGLDDRIEVIEGDALE 108 (205)
T ss_dssp HHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHHHTST-TTSEEEEEESS-HHHHHHHHHHHHHTTGGGGEEEEES-HHH
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccHHHHHHHhhc-ccceEEEecCc-HHHHHHHHHHHHhcCCCCcEEEEEeccHh
Confidence 34556677888888999888777764 6666665554 44466655543 2233334455555543 34444433344
Q ss_pred HHHhhcC----CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 131 EVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
.+.+... ....+|++...- ......++.+.++. +.|.++|+|++...|.
T Consensus 109 ~l~~l~~~~~~~~fD~VFiDa~K--~~y~~y~~~~~~ll-~~ggvii~DN~l~~G~ 161 (205)
T PF01596_consen 109 VLPELANDGEEGQFDFVFIDADK--RNYLEYFEKALPLL-RPGGVIIADNVLWRGS 161 (205)
T ss_dssp HHHHHHHTTTTTSEEEEEEESTG--GGHHHHHHHHHHHE-EEEEEEEEETTTGGGG
T ss_pred hHHHHHhccCCCceeEEEEcccc--cchhhHHHHHhhhc-cCCeEEEEccccccce
Confidence 4444443 246899988642 11222345555444 3589999999976553
No 413
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=71.40 E-value=27 Score=25.17 Aligned_cols=59 Identities=10% Similarity=0.130 Sum_probs=39.7
Q ss_pred HHHhhhcccCCcEEEEecCC-CHHHHHhhc-CCCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 108 RLLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l-~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
..+...++..|.++.....+ +.+++.+.+ +.++.+|.++.... .....+.++++.+|+.
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~--~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLT--THMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHHc
Confidence 33457778888898777654 555665444 46788888765533 2346678888888876
No 414
>PTZ00081 enolase; Provisional
Probab=71.23 E-value=24 Score=32.26 Aligned_cols=91 Identities=13% Similarity=0.129 Sum_probs=61.3
Q ss_pred HHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecC--CCHHHHHhhcCCCc-eEEEEeCCCCCcccccc
Q 022194 83 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGPWT-KLVWVESPTNPRQQICD 157 (301)
Q Consensus 83 i~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~--~d~~~l~~~l~~~~-~~v~i~~~~np~G~~~~ 157 (301)
+..+..++++-+-+.+.+|....-...|..+.+..| +.+.-=+. .+++.+...+..+. .++.+. + |..|.+.+
T Consensus 287 i~~~~~~l~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~IvgDE~~~tn~~~l~~~I~~~aad~i~iK-v-nqiGGITe 364 (439)
T PTZ00081 287 VELYLDLVKKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQIVGDDLLVTNPTRIKKAIEKKACNALLLK-V-NQIGTVTE 364 (439)
T ss_pred HHHHHHHHhcCCcEEEEcCCCcccHHHHHHHHHhhCCCceEEcCCcccCCHHHHHHHHHhCCCCEEEec-c-ccccCHHH
Confidence 345555666656678899987766666767766663 33322221 35888888887544 344433 3 34789999
Q ss_pred HHHHHHHHHHcCCEEEEe
Q 022194 158 IRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D 175 (301)
..+++++|+++|+.+++=
T Consensus 365 ~l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 365 AIEAAKLAQKNGWGVMVS 382 (439)
T ss_pred HHHHHHHHHHcCCcEEEe
Confidence 999999999999887774
No 415
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=70.61 E-value=30 Score=29.42 Aligned_cols=100 Identities=10% Similarity=0.112 Sum_probs=51.2
Q ss_pred CceEEecchHHHH-HHHHhccCCCC--eEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEE
Q 022194 71 DRALCFTSGMAAL-AAVTHLLGTGE--EIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (301)
Q Consensus 71 ~~~i~~~sG~~ai-~~~~~~~~~g~--~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i 145 (301)
.+.+++-+-+..+ ..+....+.|. +|++.+ |.+.+ . .+...+...|+++..++...+..+.+. .+..|++
T Consensus 108 ~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG-~-~~a~~L~~~gi~v~~i~d~~~~~~m~~---~vd~Vli 182 (282)
T PF01008_consen 108 GDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEG-R-LMAKELAEAGIPVTLIPDSAVGYVMPR---DVDKVLI 182 (282)
T ss_dssp TEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHH-H-THHHHHHHTT-EEEEE-GGGHHHHHHC---TESEEEE
T ss_pred CeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhh-h-hHHHHhhhcceeEEEEechHHHHHHHH---hCCeeEE
Confidence 3455554445444 45555444442 455444 44433 2 223445567999999985555555443 2444444
Q ss_pred -eCCCCCcccccc---HHHHHHHHHHcCCEEEEe
Q 022194 146 -ESPTNPRQQICD---IRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 146 -~~~~np~G~~~~---l~~l~~l~~~~~~~li~D 175 (301)
...-.+.|.+.. -..++-+||.+++++++=
T Consensus 183 Gad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 183 GADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp E-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred eeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 333445565532 566888899999988775
No 416
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=70.45 E-value=28 Score=29.68 Aligned_cols=93 Identities=20% Similarity=0.185 Sum_probs=54.0
Q ss_pred ecchHH--HHHHHHhccCCC--CeEEEcCCCCccHHHHHhhhcccCCcE-EEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 76 FTSGMA--ALAAVTHLLGTG--EEIVAGDDLYGGTDRLLSRVTPKTGVV-VKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 76 ~~sG~~--ai~~~~~~~~~g--~~Vlv~~~~y~~~~~~~~~~~~~~g~~-~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
+|+|+. +-..+..+++.| .+|.+.+..-.... .......+.. +...+..|.+.++++++.-..++.+.++..
T Consensus 2 VTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~---~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 2 VTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF---LKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP 78 (280)
T ss_pred EEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc---chhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence 455553 335778888888 45655443222211 0122333333 778888899999999985433444445555
Q ss_pred Cccccc----------cHHHHHHHHHHcCCE
Q 022194 151 PRQQIC----------DIRKIAEMAHAHGAL 171 (301)
Q Consensus 151 p~G~~~----------~l~~l~~l~~~~~~~ 171 (301)
+.+... --+.|++.|+++++.
T Consensus 79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~Vk 109 (280)
T PF01073_consen 79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVK 109 (280)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 555221 145588999998764
No 417
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=70.05 E-value=45 Score=28.83 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=53.8
Q ss_pred CceEEecchHHH-HHHHHhccCCC--CeEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEE
Q 022194 71 DRALCFTSGMAA-LAAVTHLLGTG--EEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (301)
Q Consensus 71 ~~~i~~~sG~~a-i~~~~~~~~~g--~~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i 145 (301)
.+.+++-+.+.. ...+..+.+.| -+|++.+ |.+.+. .+..-+...|+++..++...+..+.+ ++..|++
T Consensus 116 g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~--~~a~~L~~~gI~vtlI~Dsa~~~~m~----~vd~Viv 189 (301)
T TIGR00511 116 GDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGH--ITAKELRDYGIPVTLIVDSAVRYFMK----EVDHVVV 189 (301)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHH--HHHHHHHHCCCCEEEEehhHHHHHHH----hCCEEEE
Confidence 355555444533 34444444333 3455443 454442 22345567899999887443444433 3444444
Q ss_pred -eCCCCCcccccc---HHHHHHHHHHcCCEEEEe
Q 022194 146 -ESPTNPRQQICD---IRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 146 -~~~~np~G~~~~---l~~l~~l~~~~~~~li~D 175 (301)
...-...|.+.. --.++-+||.+++++++=
T Consensus 190 Gad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 190 GADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred CccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 333334454443 345888899999987763
No 418
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=69.46 E-value=38 Score=29.06 Aligned_cols=88 Identities=15% Similarity=0.192 Sum_probs=58.1
Q ss_pred HHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC-cEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc--c-
Q 022194 82 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC--D- 157 (301)
Q Consensus 82 ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g-~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~--~- 157 (301)
....+-.+.+.|..|+++=-.-....+.+ +.....| +-+..+++.|.|.+.+.++....+|=+..-..+|+... |
T Consensus 74 Gryvvnklak~GSQviiPyR~d~~~~r~l-kvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dv 152 (391)
T KOG2865|consen 74 GRYVVNKLAKMGSQVIIPYRGDEYDPRHL-KVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDV 152 (391)
T ss_pred cHHHHHHHhhcCCeEEEeccCCccchhhe-eecccccceeeeccCCCCHHHHHHHHHhCcEEEEeeccccccCCcccccc
Confidence 34577778888999998633222222222 4445554 33444556699999999986666666666677777763 2
Q ss_pred ----HHHHHHHHHHcCC
Q 022194 158 ----IRKIAEMAHAHGA 170 (301)
Q Consensus 158 ----l~~l~~l~~~~~~ 170 (301)
-++|+.+|++-|+
T Consensus 153 n~~~aerlAricke~GV 169 (391)
T KOG2865|consen 153 NVHIAERLARICKEAGV 169 (391)
T ss_pred cchHHHHHHHHHHhhCh
Confidence 6789999999886
No 419
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=69.04 E-value=20 Score=32.44 Aligned_cols=93 Identities=9% Similarity=0.040 Sum_probs=61.6
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEec--CCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVN--TCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~--~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
+++..+..++.+-+-+.+.+|....-...|..+.+.. .+.+.-=+ ..+++++++.+.....-++..-++ ..|.+.
T Consensus 265 eai~~~~~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~ipi~gdE~~~~~~~~~~~~i~~~a~d~v~ik~~-~iGGit 343 (408)
T cd03313 265 ELIDYYKELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDKIQIVGDDLFVTNPERLKKGIEKKAANALLIKVN-QIGTLT 343 (408)
T ss_pred HHHHHHHHHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCCCeEEcCCcccCCHHHHHHHHHhCCCCEEEEccc-ccCCHH
Confidence 4555566666655677899998766566666666665 33332222 126888888887544333333333 478999
Q ss_pred cHHHHHHHHHHcCCEEEE
Q 022194 157 DIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~ 174 (301)
+..+++++|+++|+.+++
T Consensus 344 e~~~ia~lA~~~G~~~~~ 361 (408)
T cd03313 344 ETIEAIKLAKKNGYGVVV 361 (408)
T ss_pred HHHHHHHHHHHcCCeEEc
Confidence 999999999999998874
No 420
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=68.17 E-value=49 Score=28.58 Aligned_cols=131 Identities=13% Similarity=0.123 Sum_probs=81.0
Q ss_pred EEecchHHHH-HHHHh-ccC--CCCe-EEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEE--
Q 022194 74 LCFTSGMAAL-AAVTH-LLG--TGEE-IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWV-- 145 (301)
Q Consensus 74 i~~~sG~~ai-~~~~~-~~~--~g~~-Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i-- 145 (301)
+++|+|..=| +.+.+ +++ +.++ +.+....|-+....+..+.......++..+..|.+.+.+.+.+ ++.+|+-
T Consensus 3 iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfA 82 (340)
T COG1088 3 ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVHFA 82 (340)
T ss_pred EEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEEec
Confidence 6778887555 33333 332 2343 4566679999887776777777888888888899999999885 4555542
Q ss_pred --eCCCCCcccccc--------HHHHHHHHHHcCC---E--EEEeCCcCCccccC-------c---------cCCCCcEE
Q 022194 146 --ESPTNPRQQICD--------IRKIAEMAHAHGA---L--LLVDNSIMSPVLSR-------P---------LELGADIV 194 (301)
Q Consensus 146 --~~~~np~G~~~~--------l~~l~~l~~~~~~---~--li~D~~~~~~~~~~-------~---------~~~~~di~ 194 (301)
++..++.-.-.+ --.|.+.++++.. + +=-||+|+.-.... + .....|..
T Consensus 83 AESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~l 162 (340)
T COG1088 83 AESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLL 162 (340)
T ss_pred hhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHH
Confidence 233332211111 3458888999873 2 33599997432210 1 11245788
Q ss_pred EecccccccC
Q 022194 195 MHSATKFIAG 204 (301)
Q Consensus 195 ~~S~sK~~~g 204 (301)
+.+..++++-
T Consensus 163 Vray~~TYgl 172 (340)
T COG1088 163 VRAYVRTYGL 172 (340)
T ss_pred HHHHHHHcCC
Confidence 8888888843
No 421
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=67.44 E-value=24 Score=26.65 Aligned_cols=75 Identities=15% Similarity=0.214 Sum_probs=53.3
Q ss_pred CeEEEcCCCCccHH---HHHhhhcccCCcEEEEecCC-CH-HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 94 EEIVAGDDLYGGTD---RLLSRVTPKTGVVVKRVNTC-DL-DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 94 ~~Vlv~~~~y~~~~---~~~~~~~~~~g~~~~~~~~~-d~-~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
-+|++..+...++. ..+.+.++..|.+++..... ++ |.+.+++.++..+|.+++-.- +.....+++.+.++++
T Consensus 13 prvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~dv~vIgvSsl~g--~h~~l~~~lve~lre~ 90 (143)
T COG2185 13 PRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVRAAVEEDVDVIGVSSLDG--GHLTLVPGLVEALREA 90 (143)
T ss_pred ceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHHHHHhcCCCEEEEEeccc--hHHHHHHHHHHHHHHh
Confidence 35666666544443 34567788999999888865 44 445667788888888876553 4556789999999998
Q ss_pred CC
Q 022194 169 GA 170 (301)
Q Consensus 169 ~~ 170 (301)
|.
T Consensus 91 G~ 92 (143)
T COG2185 91 GV 92 (143)
T ss_pred CC
Confidence 64
No 422
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=67.38 E-value=36 Score=31.06 Aligned_cols=92 Identities=12% Similarity=0.101 Sum_probs=60.4
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecC--CCHHHHHhhcCCC-ceEEEEeCCCCCcccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQI 155 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~--~d~~~l~~~l~~~-~~~v~i~~~~np~G~~ 155 (301)
+++..+..++.+-+-+.+.+|....-...|..+.+.. .+.+..=+. .+++.+++.+... ..++.+. + |..|.+
T Consensus 266 eai~~~~~lle~~~i~~iEdPl~~~D~~~~~~L~~~~~~~ipI~gDE~~~t~~~~~~~~i~~~a~d~v~ik-~-~~iGGI 343 (425)
T TIGR01060 266 EMIEYYKELVEKYPIVSIEDGLSEEDWEGWAELTKELGDKVQIVGDDLFVTNTEILREGIEMGVANSILIK-P-NQIGTL 343 (425)
T ss_pred HHHHHHHHHHhcCCcEEEEcCCCcccHHHHHHHHHhcCCCCeEEeCCCcccCHHHHHHHHHhCCCCEEEec-c-cccCCH
Confidence 4555555556554567899998766555666665665 344433232 2588888888754 4444433 3 558999
Q ss_pred ccHHHHHHHHHHcCCEEEE
Q 022194 156 CDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~ 174 (301)
.+..+++++|+++|+.+++
T Consensus 344 tea~~ia~lA~~~Gi~~vv 362 (425)
T TIGR01060 344 TETLDAVELAKKAGYTAVI 362 (425)
T ss_pred HHHHHHHHHHHHcCCcEEE
Confidence 9999999999999987553
No 423
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=66.77 E-value=30 Score=24.37 Aligned_cols=48 Identities=13% Similarity=0.051 Sum_probs=32.0
Q ss_pred EEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 121 VKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
+.-++.+..|.+..++....++++++. ...+-+++.++|++.++.++.
T Consensus 43 lvIt~gdR~di~~~a~~~~i~~iIltg------~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 43 LVITPGDREDIQLAAIEAGIACIILTG------GLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEETT-HHHHHHHCCTTECEEEEET------T----HHHHHHHHHHT-EEEE
T ss_pred EEEEeCCcHHHHHHHHHhCCCEEEEeC------CCCCCHHHHHHHHHCCCEEEE
Confidence 333434567778888888888888874 444558899999999988775
No 424
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=66.22 E-value=34 Score=28.93 Aligned_cols=12 Identities=25% Similarity=0.407 Sum_probs=5.3
Q ss_pred CceEEEEeCCCC
Q 022194 139 WTKLVWVESPTN 150 (301)
Q Consensus 139 ~~~~v~i~~~~n 150 (301)
....|.+.+|++
T Consensus 144 gi~~I~lv~PtT 155 (263)
T CHL00200 144 NIELILLIAPTS 155 (263)
T ss_pred CCCEEEEECCCC
Confidence 344444444443
No 425
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=65.53 E-value=49 Score=24.79 Aligned_cols=59 Identities=19% Similarity=0.158 Sum_probs=41.7
Q ss_pred HHHhhhcccCCcEEEEecCC-CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 108 RLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
..+...++..|.++++.-.+ .++++.+++. .++.+|.++...+. ....++++.+.+++.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~--~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGH--GEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCcccc--CHHHHHHHHHHHHhc
Confidence 33457788899999999876 6677766554 67888888755542 345577777877775
No 426
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=65.13 E-value=24 Score=26.78 Aligned_cols=92 Identities=11% Similarity=0.132 Sum_probs=47.0
Q ss_pred eEEecchHHHH--HHHHhccCCCC-eEEEcCCC--CccHHHHHhhhcccCCcEEEEec--CCCHHHHHhhcC------CC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGE-EIVAGDDL--YGGTDRLLSRVTPKTGVVVKRVN--TCDLDEVASAIG------PW 139 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~-~Vlv~~~~--y~~~~~~~~~~~~~~g~~~~~~~--~~d~~~l~~~l~------~~ 139 (301)
.+++++|+.++ ..+..+++.|. .|++.... ...... +..-++..+.++..+. ..+.+.+++.++ ..
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~-l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQE-LIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHH-HHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 46777777666 45666777755 43333222 111111 1122233445554444 447766666654 36
Q ss_pred ceEEEEeCCCCCcccccc--HHHHHHHH
Q 022194 140 TKLVWVESPTNPRQQICD--IRKIAEMA 165 (301)
Q Consensus 140 ~~~v~i~~~~np~G~~~~--l~~l~~l~ 165 (301)
...++.+......+...+ .+++.+..
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~ 108 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVF 108 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhcc
Confidence 677776655555555543 34444443
No 427
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=65.11 E-value=50 Score=28.26 Aligned_cols=203 Identities=18% Similarity=0.134 Sum_probs=97.4
Q ss_pred HHHHHHHHHhhcCCC---ceEEecch-HHHHH-HHHhc--cCCC---CeEEEcCCCCccHHHHHhhhcccCCcEEE-Eec
Q 022194 57 RDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHL--LGTG---EEIVAGDDLYGGTDRLLSRVTPKTGVVVK-RVN 125 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~-~~~~~--~~~g---~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~-~~~ 125 (301)
.++.+..+.+++..+ +++++.+| |.... ..+.+ ++.| |-|+.-...-..+ .-++++|..-+ ..+
T Consensus 54 i~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~-----~EAkk~~~~~~V~~~ 128 (370)
T KOG2790|consen 54 INDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAA-----EEAKKYGTPNIVIPK 128 (370)
T ss_pred HHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccCCccceEEeccccHHHH-----HHHHhhCCceEEecc
Confidence 667777888888766 46666554 54443 22223 3555 4444433222212 22334443322 222
Q ss_pred C--------CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEec
Q 022194 126 T--------CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHS 197 (301)
Q Consensus 126 ~--------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S 197 (301)
. .|.+.++. +++.+.|+.|....-.|.-.+.-. +-.-+|.+++.|-+.-.-..+- +-....+++..
T Consensus 129 ~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpv-Dvsk~gvi~aG 202 (370)
T KOG2790|consen 129 LKSYTYGKVPDPSTWEL--NPDASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPV-DVSKFGVIFAG 202 (370)
T ss_pred ccccccCcCCChhhccc--CCCccEEEEecCceeeceecCCCC---CCCCCCceEEEecccchhcCCc-cchhcceEEec
Confidence 1 14444432 234456666644444455432111 2234688899998754322221 11234578888
Q ss_pred ccccccCCCCceeeEEEEcchhHHHHHHHh-----------hhhcCCCCCHHhHHHHHccccc------HHHHHHHHHHH
Q 022194 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFL-----------QNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDN 260 (301)
Q Consensus 198 ~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~ 260 (301)
..|.. ||.|+ ..++.+++.+-...... .+..-++++.+..+.+--.+++ +....+...+.
T Consensus 203 AQKN~-G~aG~--Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~K 279 (370)
T KOG2790|consen 203 AQKNV-GPAGV--TVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEK 279 (370)
T ss_pred ccccc-Ccccc--EEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHH
Confidence 99999 78885 45555654442221110 0111133333333222112222 23344556667
Q ss_pred HHHHHHHHHhCCC
Q 022194 261 AQKIAEFLASHPR 273 (301)
Q Consensus 261 ~~~l~~~l~~~~~ 273 (301)
++.+-+.+.+..+
T Consensus 280 skllYd~iD~s~g 292 (370)
T KOG2790|consen 280 SKLLYDAIDNSNG 292 (370)
T ss_pred HHHHHHHHHhcCC
Confidence 7778888877644
No 428
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=64.96 E-value=84 Score=26.42 Aligned_cols=97 Identities=12% Similarity=0.028 Sum_probs=53.7
Q ss_pred ceEEecchHHHHHHHHhccCCCCeEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEe-CC
Q 022194 72 RALCFTSGMAALAAVTHLLGTGEEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE-SP 148 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~-~~ 148 (301)
+.+++-+.+..+..++.-.+++.+|++.+ |.+.+. .+...+...|+++..+.....-.+. +++..|++. ..
T Consensus 88 dvILT~s~S~~v~~~l~~~~~~~~V~v~ESrP~~eG~--~~a~~L~~~GI~vtli~Dsa~~~~m----~~vd~VlvGAd~ 161 (253)
T PRK06372 88 SVIGTISSSQVLKAFISSSEKIKSVYILESRPMLEGI--DMAKLLVKSGIDVVLLTDASMCEAV----LNVDAVIVGSDS 161 (253)
T ss_pred CEEEEeCCcHHHHHHHHhcCCCCEEEEecCCCchHHH--HHHHHHHHCCCCEEEEehhHHHHHH----HhCCEEEECccE
Confidence 45555444555554433344445676654 555543 2334455678888877633333232 335555553 33
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEE
Q 022194 149 TNPRQQICD---IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 149 ~np~G~~~~---l~~l~~l~~~~~~~li~ 174 (301)
-...|.+.. -..++-.|+.+++++++
T Consensus 162 V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 162 VLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred EecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 334555543 45577788999998887
No 429
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=64.60 E-value=33 Score=32.03 Aligned_cols=84 Identities=11% Similarity=0.120 Sum_probs=53.6
Q ss_pred hhhcccCC-cEEEEecCC----CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc--CCEEEEeCCcCCcc
Q 022194 111 SRVTPKTG-VVVKRVNTC----DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPV 182 (301)
Q Consensus 111 ~~~~~~~g-~~~~~~~~~----d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~--~~~li~D~~~~~~~ 182 (301)
...++..| .++..++.. +.+++.+.+. .++.+|.++.. |.......++++.+|+. ++.+|+=..|....
T Consensus 29 Aa~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~~ 105 (497)
T TIGR02026 29 GGALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTFM 105 (497)
T ss_pred HHHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCcC
Confidence 35566777 677777743 5567766665 47888887642 33455677899999887 89999888876443
Q ss_pred ccCccC--CCCcEEEec
Q 022194 183 LSRPLE--LGADIVMHS 197 (301)
Q Consensus 183 ~~~~~~--~~~di~~~S 197 (301)
....+. .++|+++..
T Consensus 106 ~~~~l~~~p~vD~Vv~G 122 (497)
T TIGR02026 106 FHQVLTEAPWIDFIVRG 122 (497)
T ss_pred HHHHHhcCCCccEEEeC
Confidence 322221 245655543
No 430
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=64.58 E-value=13 Score=27.51 Aligned_cols=41 Identities=12% Similarity=0.027 Sum_probs=26.1
Q ss_pred HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 022194 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 130 ~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~ 176 (301)
+.+++.+..++.+++++... .+.+++.++|++++++++.=.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEEES
T ss_pred HHHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEEcC
Confidence 34666677788888888655 456899999999999877533
No 431
>CHL00194 ycf39 Ycf39; Provisional
Probab=64.30 E-value=50 Score=28.50 Aligned_cols=91 Identities=13% Similarity=0.068 Sum_probs=52.1
Q ss_pred EEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
+++++|+.-+ .++..+++.|.+|.+..-.-... ......++++...+..|.+.+.++++. +.+|+-.....+
T Consensus 3 IlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-----~~l~~~~v~~v~~Dl~d~~~l~~al~g-~d~Vi~~~~~~~ 76 (317)
T CHL00194 3 LLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-----SFLKEWGAELVYGDLSLPETLPPSFKG-VTAIIDASTSRP 76 (317)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-----hhHhhcCCEEEECCCCCHHHHHHHHCC-CCEEEECCCCCC
Confidence 5566665333 46667778888776432111111 112234788888888899999888874 455554322111
Q ss_pred cc--ccc--c---HHHHHHHHHHcCC
Q 022194 152 RQ--QIC--D---IRKIAEMAHAHGA 170 (301)
Q Consensus 152 ~G--~~~--~---l~~l~~l~~~~~~ 170 (301)
.. ... + ...+++.|++.|+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~aa~~~gv 102 (317)
T CHL00194 77 SDLYNAKQIDWDGKLALIEAAKAAKI 102 (317)
T ss_pred CCccchhhhhHHHHHHHHHHHHHcCC
Confidence 11 111 1 3568888999886
No 432
>PLN02476 O-methyltransferase
Probab=64.25 E-value=92 Score=26.62 Aligned_cols=119 Identities=18% Similarity=0.220 Sum_probs=56.4
Q ss_pred HHHHHHHhhcCCCceEEecch--HHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE--EEEecCCCHHHHHh
Q 022194 59 ALESLLAKLDKADRALCFTSG--MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--VKRVNTCDLDEVAS 134 (301)
Q Consensus 59 ~l~~~l~~~~~~~~~i~~~sG--~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~--~~~~~~~d~~~l~~ 134 (301)
++...+.+..++..++=++++ ..++.++..+ .++.+|+..+..- ......+..++..|+. +..+.-+-.+.|.+
T Consensus 108 ~lL~~L~~~~~ak~VLEIGT~tGySal~lA~al-~~~G~V~TiE~d~-e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~ 185 (278)
T PLN02476 108 QLLAMLVQILGAERCIEVGVYTGYSSLAVALVL-PESGCLVACERDS-NSLEVAKRYYELAGVSHKVNVKHGLAAESLKS 185 (278)
T ss_pred HHHHHHHHhcCCCeEEEecCCCCHHHHHHHHhC-CCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH
Confidence 333444444455554444333 4555544433 3333455433322 2223333445555553 33333222333333
Q ss_pred hc----CCCceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 135 AI----GPWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 135 ~l----~~~~~~v~i~~~~np~G~~~~-l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
.. .+...+|++...- +...+ ++.+.++.+ .|.++++|++...|..
T Consensus 186 l~~~~~~~~FD~VFIDa~K---~~Y~~y~e~~l~lL~-~GGvIV~DNvL~~G~V 235 (278)
T PLN02476 186 MIQNGEGSSYDFAFVDADK---RMYQDYFELLLQLVR-VGGVIVMDNVLWHGRV 235 (278)
T ss_pred HHhcccCCCCCEEEECCCH---HHHHHHHHHHHHhcC-CCcEEEEecCccCCcc
Confidence 22 1356788887542 22222 445555443 4788999999765543
No 433
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=63.59 E-value=91 Score=28.29 Aligned_cols=86 Identities=9% Similarity=0.224 Sum_probs=50.7
Q ss_pred HHHhccCCCCeEE-EcCCCCccHHHHHhhhcccCCc---EEEEecCCCHHHHHhhcC-CCceEEEEeCCCC---Cc----
Q 022194 85 AVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGV---VVKRVNTCDLDEVASAIG-PWTKLVWVESPTN---PR---- 152 (301)
Q Consensus 85 ~~~~~~~~g~~Vl-v~~~~y~~~~~~~~~~~~~~g~---~~~~~~~~d~~~l~~~l~-~~~~~v~i~~~~n---p~---- 152 (301)
....+.+.+ +|+ |+.-.-. ..++-.+.++|+ .+......+++++.+.+. .+++++++.+.++ +.
T Consensus 113 va~~lA~~~-~vLYVsGEES~---~QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~Sa 188 (456)
T COG1066 113 VAARLAKRG-KVLYVSGEESL---QQIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSA 188 (456)
T ss_pred HHHHHHhcC-cEEEEeCCcCH---HHHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCC
Confidence 444456666 555 4433322 223344455553 333333448888888876 6788998876643 22
Q ss_pred -ccccc----HHHHHHHHHHcCCEEEE
Q 022194 153 -QQICD----IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 153 -G~~~~----l~~l~~l~~~~~~~li~ 174 (301)
|.+.. -.+|.++||+.|+.++.
T Consensus 189 pGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 189 PGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 55544 45588999999976543
No 434
>smart00642 Aamy Alpha-amylase domain.
Probab=63.35 E-value=8.7 Score=29.92 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=25.5
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
..|...+++++++.||++|+.++.|-+.-
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 45777889999999999999999999953
No 435
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=63.22 E-value=33 Score=31.35 Aligned_cols=94 Identities=17% Similarity=0.121 Sum_probs=54.7
Q ss_pred CceEEecchHHHHHHHHhccCCCCeEEEcCCCCc-cHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYG-GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 71 ~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~-~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
..++++++|..++.+...+.+.|..|.+.+.... ........ +...|+++...+..+ .. .....+|+.+.
T Consensus 6 k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~-l~~~~~~~~~~~~~~--~~----~~~~d~vv~~~-- 76 (450)
T PRK14106 6 KKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEE-LGELGIELVLGEYPE--EF----LEGVDLVVVSP-- 76 (450)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-HHhcCCEEEeCCcch--hH----hhcCCEEEECC--
Confidence 3567777777677777888899999988877532 22111112 234466654433222 21 13456666432
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
|. .+-..+...|+++|++++-+-.
T Consensus 77 ---g~-~~~~~~~~~a~~~~i~~~~~~~ 100 (450)
T PRK14106 77 ---GV-PLDSPPVVQAHKKGIEVIGEVE 100 (450)
T ss_pred ---CC-CCCCHHHHHHHHCCCcEEeHHH
Confidence 22 2334477888999998887654
No 436
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=63.05 E-value=15 Score=29.82 Aligned_cols=50 Identities=14% Similarity=0.213 Sum_probs=38.1
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCc
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~G~~-~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
.+.++++++....++-+-.-+..+-.. .-.+++.++|++|++.|++++-.
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~~ 74 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDRV 74 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCcH
Confidence 688999999888887776555444332 34688999999999999988863
No 437
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=62.77 E-value=1e+02 Score=26.61 Aligned_cols=102 Identities=11% Similarity=0.152 Sum_probs=58.0
Q ss_pred CceEEecchHHHHH-HHHhccCCC--CeEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEE
Q 022194 71 DRALCFTSGMAALA-AVTHLLGTG--EEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (301)
Q Consensus 71 ~~~i~~~sG~~ai~-~~~~~~~~g--~~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i 145 (301)
.+++++-+.+..+. .+....++| -.|+|.+ |.+.++. .....+ ..|++..-++ ...+-+.+..-.++|+.
T Consensus 163 nEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~-~Ak~la-~~giettVI~---daaVfA~MsrVnKVIig 237 (353)
T KOG1465|consen 163 NEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHE-LAKPLA-QAGIETTVIP---DAAVFAMMSRVNKVIIG 237 (353)
T ss_pred CceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchH-hhHHHH-HcCCeeEEec---cHHHHHHhhhcceEEEE
Confidence 35566555555553 344444443 3455544 4555532 222333 6677766666 33444555555567777
Q ss_pred eCCCCCccccc-c--HHHHHHHHHHcCCEEEEeCC
Q 022194 146 ESPTNPRQQIC-D--IRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 146 ~~~~np~G~~~-~--l~~l~~l~~~~~~~li~D~~ 177 (301)
++.--+.|.+- + ...++..||+|-+++++=.-
T Consensus 238 t~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 238 THAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred eeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 76655555552 3 66788889999988877544
No 438
>PRK00077 eno enolase; Provisional
Probab=62.75 E-value=43 Score=30.59 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=60.0
Q ss_pred HHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecC--CCHHHHHhhcCCC-ceEEEEeCCCCCccccc
Q 022194 82 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQIC 156 (301)
Q Consensus 82 ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~--~d~~~l~~~l~~~-~~~v~i~~~~np~G~~~ 156 (301)
++..+..++.+-+-+.+.+|....-...|..+.+..+ +.+..=+. .+++.+++.+..+ ..++.+. + +..|.+.
T Consensus 266 ~~~~~~~l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~ipI~gdE~~~t~~~~~~~~i~~~a~d~v~ik-~-~~~GGit 343 (425)
T PRK00077 266 MIDYLAELVDKYPIVSIEDGLDENDWEGWKLLTEKLGDKVQLVGDDLFVTNTKRLKKGIEKGAANSILIK-V-NQIGTLT 343 (425)
T ss_pred HHHHHHHHHhhCCcEEEEcCCCCccHHHHHHHHHhcCCCCeEEcCCCccCCHHHHHHHHHhCCCCEEEeC-c-cccCCHH
Confidence 3445566666656778999987655555656666653 34332221 2588888888754 3444433 3 3479999
Q ss_pred cHHHHHHHHHHcCCEEEE
Q 022194 157 DIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~ 174 (301)
+..+++++|+.+|+.+++
T Consensus 344 ea~~ia~lA~~~gi~~~v 361 (425)
T PRK00077 344 ETLDAIELAKRAGYTAVV 361 (425)
T ss_pred HHHHHHHHHHHcCCeEEE
Confidence 999999999999996664
No 439
>PRK05993 short chain dehydrogenase; Provisional
Probab=62.45 E-value=51 Score=27.72 Aligned_cols=70 Identities=10% Similarity=0.155 Sum_probs=40.0
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC-------CCceE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-------PWTKL 142 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~-------~~~~~ 142 (301)
..+++++|+..+ ..+..+.+.|.+|++....-.. +... ...++.+..++..|.+.+++.++ ..+.+
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~----~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEED----VAAL-EAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----HHHH-HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 356777776555 3556677788888765432111 1111 22366777777777776655543 24566
Q ss_pred EEEe
Q 022194 143 VWVE 146 (301)
Q Consensus 143 v~i~ 146 (301)
++-+
T Consensus 80 li~~ 83 (277)
T PRK05993 80 LFNN 83 (277)
T ss_pred EEEC
Confidence 5544
No 440
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=62.31 E-value=8.4 Score=36.70 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=29.0
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 147 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 147 ~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
.|++.-|.-.+++++++.||+.||-||+|-+++
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 566667777789999999999999999999976
No 441
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=61.67 E-value=33 Score=29.48 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=45.2
Q ss_pred CCCccHHHHHhhhccc--CCcEEEEecCC-CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 101 DLYGGTDRLLSRVTPK--TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 101 ~~y~~~~~~~~~~~~~--~g~~~~~~~~~-d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
++|.+.. .+-+. ..+-+..++.. -++.++++....++.+++-+...+ ..+-++|.++|+++|+.++==++
T Consensus 52 ~~y~sv~----dlp~~~~~DlAvi~vp~~~v~~~l~e~~~~gvk~avI~s~Gf~---~~~~~~l~~~a~~~girvlGPNc 124 (291)
T PRK05678 52 PVFNTVA----EAVEATGANASVIYVPPPFAADAILEAIDAGIDLIVCITEGIP---VLDMLEVKAYLERKKTRLIGPNC 124 (291)
T ss_pred eccCCHH----HHhhccCCCEEEEEcCHHHHHHHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHHHcCCEEECCCC
Confidence 4555553 33333 45566666654 356777777788887665543332 22335899999999999886666
Q ss_pred cC
Q 022194 178 IM 179 (301)
Q Consensus 178 ~~ 179 (301)
.+
T Consensus 125 ~G 126 (291)
T PRK05678 125 PG 126 (291)
T ss_pred Cc
Confidence 54
No 442
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=61.13 E-value=35 Score=24.11 Aligned_cols=84 Identities=24% Similarity=0.198 Sum_probs=43.1
Q ss_pred eEEecchH--HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC-CCceEEEEeCCC
Q 022194 73 ALCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPT 149 (301)
Q Consensus 73 ~i~~~sG~--~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~~~ 149 (301)
++++.||. +|+.--+.-....++|.+. |...+.. . .+ +...++..|.+.+.+.++ +++.++++- |
T Consensus 3 VLviGsGgREHAia~~l~~s~~v~~v~~a-PGN~G~~----~----~~-~~~~~~~~d~~~l~~~a~~~~idlvvvG-P- 70 (100)
T PF02844_consen 3 VLVIGSGGREHAIAWKLSQSPSVEEVYVA-PGNPGTA----E----LG-KNVPIDITDPEELADFAKENKIDLVVVG-P- 70 (100)
T ss_dssp EEEEESSHHHHHHHHHHTTCTTEEEEEEE-E--TTGG----G----TS-EEE-S-TT-HHHHHHHHHHTTESEEEES-S-
T ss_pred EEEECCCHHHHHHHHHHhcCCCCCEEEEe-CCCHHHH----h----hc-eecCCCCCCHHHHHHHHHHcCCCEEEEC-C-
Confidence 56777764 6665333333334456653 3444442 1 21 224446678888887776 566776642 2
Q ss_pred CCccccccH-HHHHHHHHHcCCEEE
Q 022194 150 NPRQQICDI-RKIAEMAHAHGALLL 173 (301)
Q Consensus 150 np~G~~~~l-~~l~~l~~~~~~~li 173 (301)
-.|| .-|++..++.|+.++
T Consensus 71 -----E~pL~~Gl~D~l~~~gi~vf 90 (100)
T PF02844_consen 71 -----EAPLVAGLADALRAAGIPVF 90 (100)
T ss_dssp -----HHHHHTTHHHHHHHTT-CEE
T ss_pred -----hHHHHHHHHHHHHHCCCcEE
Confidence 3333 347788888776553
No 443
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=60.75 E-value=67 Score=25.80 Aligned_cols=44 Identities=18% Similarity=0.102 Sum_probs=29.4
Q ss_pred HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 131 ~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
+++...+++-.++++++ +|...++.++++.+|++|+.+|.=-.+
T Consensus 102 ql~~~~~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~IT~~ 145 (196)
T PRK10886 102 QVRALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVALTGY 145 (196)
T ss_pred HHHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 44444455545555443 466778999999999999988764443
No 444
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=60.58 E-value=53 Score=23.47 Aligned_cols=61 Identities=20% Similarity=0.153 Sum_probs=34.4
Q ss_pred ccCCcEEEEecC----CCHHHHHhhcCC--CceEEEEe-CCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 022194 115 PKTGVVVKRVNT----CDLDEVASAIGP--WTKLVWVE-SPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 115 ~~~g~~~~~~~~----~d~~~l~~~l~~--~~~~v~i~-~~~np~G~~~~l~~l~~l~~~~~~~li~D~ 176 (301)
+..|+++..+.. .++ ++.+.+.+ ++.+|+-. .+.+......+-..|.+.|-+++++++.+-
T Consensus 39 ~~~Gi~~~~v~~~~~~g~~-~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 39 ADAGIPVRAVSKRHEDGEP-TVDAAIAEKGKFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred HHcCCceEEEEecCCCCCc-HHHHHHhCCCCEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEECH
Confidence 345665555432 123 34444444 55555433 122211234457889999999999998763
No 445
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=60.31 E-value=92 Score=25.34 Aligned_cols=92 Identities=17% Similarity=0.187 Sum_probs=56.1
Q ss_pred ceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
.++++++|..|..-+..+++.|..|.+-.|....-.. .+.+..++.... ...+.+.+. ...+|++. .+++
T Consensus 14 ~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~---~~~~~~~i~~~~-~~~~~~~~~-----~~~lviaA-t~d~ 83 (210)
T COG1648 14 KVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELK---ALIEEGKIKWIE-REFDAEDLD-----DAFLVIAA-TDDE 83 (210)
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHH---HHHHhcCcchhh-cccChhhhc-----CceEEEEe-CCCH
Confidence 5888999999998888999999999888888744332 344444422221 111333332 23444433 3332
Q ss_pred ccccccHHHHHHHHHHcCCEEE-EeCC
Q 022194 152 RQQICDIRKIAEMAHAHGALLL-VDNS 177 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~~~li-~D~~ 177 (301)
.-=++|.+.|+++++++- +|+.
T Consensus 84 ----~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 84 ----ELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred ----HHHHHHHHHHHHhCCceeccCCc
Confidence 123779999999997664 4444
No 446
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=60.18 E-value=96 Score=25.51 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=55.9
Q ss_pred ceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
.++++++|.-|..-+..+++.|-.|.+-.|....-.. .......+++..-+. +.+++ ....+|+... +++
T Consensus 27 ~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~---~l~~~~~i~~~~r~~-~~~dl-----~g~~LViaAT-dD~ 96 (223)
T PRK05562 27 KVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFL---DLKKYGNLKLIKGNY-DKEFI-----KDKHLIVIAT-DDE 96 (223)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHH---HHHhCCCEEEEeCCC-ChHHh-----CCCcEEEECC-CCH
Confidence 6888999998888888888888888888887765542 333333333332221 23333 2345555442 221
Q ss_pred ccccccHHHHHHHHHHcCCEEE-EeCC
Q 022194 152 RQQICDIRKIAEMAHAHGALLL-VDNS 177 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~~~li-~D~~ 177 (301)
.-=++|.+.|+++++++. +|+.
T Consensus 97 ----~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 97 ----KLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred ----HHHHHHHHHHHHcCCeEEEcCCc
Confidence 123679999999886554 5664
No 447
>PRK05580 primosome assembly protein PriA; Validated
Probab=60.15 E-value=1e+02 Score=30.19 Aligned_cols=94 Identities=20% Similarity=0.181 Sum_probs=48.4
Q ss_pred cch-HHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-CH----HHHHhhcCCCceEEEEeCCC
Q 022194 77 TSG-MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DL----DEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 77 ~sG-~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-d~----~~l~~~l~~~~~~v~i~~~~ 149 (301)
++| |++. ..+...+..|..+++-.|.-.-.....+.+.+..|..+..+.-. +. +.+.+....++++|+-+ ++
T Consensus 172 GSGKT~v~l~~i~~~l~~g~~vLvLvPt~~L~~Q~~~~l~~~fg~~v~~~~s~~s~~~r~~~~~~~~~g~~~IVVgT-rs 250 (679)
T PRK05580 172 GSGKTEVYLQAIAEVLAQGKQALVLVPEIALTPQMLARFRARFGAPVAVLHSGLSDGERLDEWRKAKRGEAKVVIGA-RS 250 (679)
T ss_pred CChHHHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEec-cH
Confidence 556 4443 35555566677888777766554444444444456555544432 22 22333344556666543 21
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
. ...|+ + .=.++|+||.|..+.
T Consensus 251 a---l~~p~-------~-~l~liVvDEeh~~s~ 272 (679)
T PRK05580 251 A---LFLPF-------K-NLGLIIVDEEHDSSY 272 (679)
T ss_pred H---hcccc-------c-CCCEEEEECCCcccc
Confidence 1 11121 1 125889999986543
No 448
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=60.04 E-value=65 Score=27.98 Aligned_cols=68 Identities=13% Similarity=0.225 Sum_probs=50.8
Q ss_pred HHHhhhcccCCcEEEEecCC---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 108 RLLSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
+.+...++..|+++.+.... |.....+.+..++.+|++..-++ ...-++.+...+.+++++++.++.-
T Consensus 178 eelk~~A~~~Gl~vve~~v~~~ndi~~a~~~l~g~~d~i~~p~dn~---i~s~~~~l~~~a~~~kiPli~sd~~ 248 (322)
T COG2984 178 EELKKEARKAGLEVVEAAVTSVNDIPRAVQALLGKVDVIYIPTDNL---IVSAIESLLQVANKAKIPLIASDTS 248 (322)
T ss_pred HHHHHHHHHCCCEEEEEecCcccccHHHHHHhcCCCcEEEEecchH---HHHHHHHHHHHHHHhCCCeecCCHH
Confidence 34567889999999999876 44445555667888888764433 2335788999999999999998874
No 449
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=59.90 E-value=51 Score=27.85 Aligned_cols=13 Identities=23% Similarity=0.501 Sum_probs=6.5
Q ss_pred CceEEEEeCCCCC
Q 022194 139 WTKLVWVESPTNP 151 (301)
Q Consensus 139 ~~~~v~i~~~~np 151 (301)
....|.+..|+.+
T Consensus 147 gi~~I~lvaPtt~ 159 (265)
T COG0159 147 GIDPIFLVAPTTP 159 (265)
T ss_pred CCcEEEEeCCCCC
Confidence 4455555555543
No 450
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) []. Members of this family are about 220 amino acids long. It also includes the CmcI protein O85726 from SWISSPROT, which is presumed to represent the cephalosporin-7--hydroxylase []. However this has not been experimentally verified.; GO: 0008168 methyltransferase activity, 0008610 lipid biosynthetic process; PDB: 2BR4_B 2BR3_E 2BR5_E 2BM8_J 2BM9_E.
Probab=59.70 E-value=32 Score=27.82 Aligned_cols=97 Identities=16% Similarity=0.243 Sum_probs=47.2
Q ss_pred cchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc----CCcEEEEecCCCHHHHHhhcC----CCceEEEEeC
Q 022194 77 TSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK----TGVVVKRVNTCDLDEVASAIG----PWTKLVWVES 147 (301)
Q Consensus 77 ~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~----~g~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~ 147 (301)
.+|+... +.++.++.+..+|+-.+-.-.... ....+. ..+++..-+..|.+.+++.-. ..+.+|+..+
T Consensus 43 ~GGSli~~A~ml~~~~~~~~VigiDIdir~~~---~~a~e~hp~~~rI~~i~Gds~d~~~~~~v~~~~~~~~~vlVilDs 119 (206)
T PF04989_consen 43 HGGSLIFWASMLELLGGKGKVIGIDIDIRPHN---RKAIESHPMSPRITFIQGDSIDPEIVDQVRELASPPHPVLVILDS 119 (206)
T ss_dssp TSHHHHHHHHHHHHTT---EEEEEES-GTT-----S-GGGG----TTEEEEES-SSSTHHHHTSGSS----SSEEEEESS
T ss_pred CCchHHHHHHHHHHhCCCceEEEEeCCcchhc---hHHHhhccccCceEEEECCCCCHHHHHHHHHhhccCCceEEEECC
Confidence 4455544 356667755556765555322222 122233 567777777778887776543 3555777776
Q ss_pred CCCCccccccHHHHHHHHHHcCCEE-EEeCC
Q 022194 148 PTNPRQQICDIRKIAEMAHAHGALL-LVDNS 177 (301)
Q Consensus 148 ~~np~G~~~~l~~l~~l~~~~~~~l-i~D~~ 177 (301)
.|+..-....++....+... |-++ |+|-.
T Consensus 120 ~H~~~hvl~eL~~y~plv~~-G~Y~IVeDt~ 149 (206)
T PF04989_consen 120 SHTHEHVLAELEAYAPLVSP-GSYLIVEDTI 149 (206)
T ss_dssp ----SSHHHHHHHHHHT--T-T-EEEETSHH
T ss_pred CccHHHHHHHHHHhCccCCC-CCEEEEEecc
Confidence 66644445566666666666 5554 55544
No 451
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=58.99 E-value=73 Score=25.67 Aligned_cols=36 Identities=22% Similarity=0.162 Sum_probs=27.3
Q ss_pred CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccH
Q 022194 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGT 106 (301)
Q Consensus 71 ~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~ 106 (301)
..++++++|.-|...+..+++.|..|.+.+|.+...
T Consensus 11 k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~ 46 (202)
T PRK06718 11 KRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTEN 46 (202)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHH
Confidence 367888888888877878888887777777776544
No 452
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=58.95 E-value=63 Score=23.54 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=50.1
Q ss_pred hhhcccCCcEEEEecCCCHHHHHhhcC--CCceEEEEeCCCCCccccccHHHHHHHHHHcC--CEEEEeCCcCCccccC-
Q 022194 111 SRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNSIMSPVLSR- 185 (301)
Q Consensus 111 ~~~~~~~g~~~~~~~~~d~~~l~~~l~--~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~--~~li~D~~~~~~~~~~- 185 (301)
...++..|..+...+....++..+.+. .++++|.++.. +.......++++..|+.+ +.+++=..+.......
T Consensus 9 aa~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~~---~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p~~~ 85 (127)
T cd02068 9 AAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISLM---TSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPEEI 85 (127)
T ss_pred HHHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEeec---cccHHHHHHHHHHHHHHCCCCEEEECCcchhhCHHHH
Confidence 355566677777777665655555554 57888887742 233446788888888865 7888777665433222
Q ss_pred ccCCCCcEEEe
Q 022194 186 PLELGADIVMH 196 (301)
Q Consensus 186 ~~~~~~di~~~ 196 (301)
....+.|+++.
T Consensus 86 ~~~~~~D~vv~ 96 (127)
T cd02068 86 LEEPGVDFVVI 96 (127)
T ss_pred hcCCCCCEEEE
Confidence 12234565553
No 453
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=58.66 E-value=28 Score=30.54 Aligned_cols=72 Identities=19% Similarity=0.264 Sum_probs=50.2
Q ss_pred CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC--CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 101 DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 101 ~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~--~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
..|+++. .+++...++++++....+...+-+.. ++-|.|+++-|-.. .+.+.++|.+.|+++| .++.|..+
T Consensus 59 k~y~syE----eLakd~~vDvVyi~~~~~qH~evv~l~l~~~K~VL~EKPla~--n~~e~~~iveaA~~rg-v~~meg~~ 131 (351)
T KOG2741|consen 59 KAYGSYE----ELAKDPEVDVVYISTPNPQHYEVVMLALNKGKHVLCEKPLAM--NVAEAEEIVEAAEARG-VFFMEGLW 131 (351)
T ss_pred ccccCHH----HHhcCCCcCEEEeCCCCccHHHHHHHHHHcCCcEEecccccC--CHHHHHHHHHHHHHcC-cEEEeeee
Confidence 3677774 77888888999999876554443322 34455777766543 3567999999999998 77777775
Q ss_pred C
Q 022194 179 M 179 (301)
Q Consensus 179 ~ 179 (301)
.
T Consensus 132 ~ 132 (351)
T KOG2741|consen 132 W 132 (351)
T ss_pred e
Confidence 3
No 454
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=58.56 E-value=81 Score=27.84 Aligned_cols=77 Identities=12% Similarity=0.080 Sum_probs=44.1
Q ss_pred EEcCCCCccHHH--HHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccc--ccHHHHHHHHHHcCCEE
Q 022194 97 VAGDDLYGGTDR--LLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI--CDIRKIAEMAHAHGALL 172 (301)
Q Consensus 97 lv~~~~y~~~~~--~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~--~~l~~l~~l~~~~~~~l 172 (301)
+..++.+..-.. .++.+++..|++...+..+ .+.+......... ...+|.... .....+.++|+++|+.+
T Consensus 90 vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d-~~~~~~l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~ 163 (343)
T TIGR03573 90 VTVDPGWNTELGVKNLNNLIKKLGFDLHTITIN-PETFRKLQRAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPL 163 (343)
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCC-HHHHHHHHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCE
Confidence 344555543222 3567788899888877764 3333322221111 223333222 23677889999999999
Q ss_pred EEeCCcC
Q 022194 173 LVDNSIM 179 (301)
Q Consensus 173 i~D~~~~ 179 (301)
|+.....
T Consensus 164 Il~G~~~ 170 (343)
T TIGR03573 164 IIWGENI 170 (343)
T ss_pred EEeCCCH
Confidence 9887653
No 455
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=57.49 E-value=48 Score=21.22 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=35.6
Q ss_pred HhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 022194 110 LSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D 175 (301)
+...++..|+++..+... .+.+++ ....+++..|....-.-.++++|.+++++=|-++|+|
T Consensus 10 ~~~~L~~~g~~v~~~~~~-~~~l~~----~~~tll~i~~~~~~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRKP-YEALEA----DDGTLLVIGPDLRLSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEeccc-HHHhCC----CCCEEEEEeCCCCCCchHHHHHHHHHHHcCCEEEEeC
Confidence 346667778888777643 444432 3344444444422211355788999988666666654
No 456
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=57.36 E-value=50 Score=27.86 Aligned_cols=74 Identities=8% Similarity=0.112 Sum_probs=37.5
Q ss_pred CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--CHHHHHhhcCCCceEEEEeCCCCCccccc----cHHHHHHHHHH
Q 022194 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--DLDEVASAIGPWTKLVWVESPTNPRQQIC----DIRKIAEMAHA 167 (301)
Q Consensus 94 ~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--d~~~l~~~l~~~~~~v~i~~~~np~G~~~----~l~~l~~l~~~ 167 (301)
|-|++++..+.... .+...+...|+..+.+-.. +.+.++...+.....||+.+....||.-. .+++..+.+|+
T Consensus 117 dGlIipDLP~ee~~-~~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~gFiY~vs~~GvTG~~~~~~~~l~~~i~~ik~ 195 (259)
T PF00290_consen 117 DGLIIPDLPPEESE-ELREAAKKHGLDLIPLVAPTTPEERIKKIAKQASGFIYLVSRMGVTGSRTELPDELKEFIKRIKK 195 (259)
T ss_dssp EEEEETTSBGGGHH-HHHHHHHHTT-EEEEEEETTS-HHHHHHHHHH-SSEEEEESSSSSSSTTSSCHHHHHHHHHHHHH
T ss_pred CEEEEcCCChHHHH-HHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCcEEEeeccCCCCCCcccchHHHHHHHHHHHh
Confidence 45666665554332 2234555666655544322 44555555555556666666666666653 24555555555
Q ss_pred c
Q 022194 168 H 168 (301)
Q Consensus 168 ~ 168 (301)
+
T Consensus 196 ~ 196 (259)
T PF00290_consen 196 H 196 (259)
T ss_dssp T
T ss_pred h
Confidence 4
No 457
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=56.82 E-value=1.2e+02 Score=27.23 Aligned_cols=107 Identities=18% Similarity=0.160 Sum_probs=65.1
Q ss_pred ceEEecchHHHHHHHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
+++++++|.-+-.++..+.+.+ .+|.+.+-+-....++... ....++...++..|.+.+.+++++. .+|+-..|.+
T Consensus 3 ~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~~-d~VIn~~p~~ 79 (389)
T COG1748 3 KILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKDF-DLVINAAPPF 79 (389)
T ss_pred cEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhcC-CEEEEeCCch
Confidence 5677888764444444455545 5677666554433322111 1126788888888999999999866 6555544433
Q ss_pred Cc----------ccc--------ccHHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 151 PR----------QQI--------CDIRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 151 p~----------G~~--------~~l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
-+ |.- .+..++.+.|++.|+..+.+.-+..|
T Consensus 80 ~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPG 128 (389)
T COG1748 80 VDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPG 128 (389)
T ss_pred hhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcc
Confidence 11 221 12366888888888888888876644
No 458
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=56.71 E-value=9.6 Score=32.45 Aligned_cols=30 Identities=17% Similarity=0.286 Sum_probs=26.2
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
+...|...++++|++.||++|+.||+|-+.
T Consensus 45 d~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 45 DPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp STTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccccchhhhhhhhhhccccccceEEEeeec
Confidence 344577788999999999999999999995
No 459
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=56.12 E-value=72 Score=26.87 Aligned_cols=90 Identities=14% Similarity=0.190 Sum_probs=49.0
Q ss_pred EEecchH-HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEe-CCCC
Q 022194 74 LCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE-SPTN 150 (301)
Q Consensus 74 i~~~sG~-~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~-~~~n 150 (301)
+++.+|| ++-.++..+.+.|..|+++.-.=.+. ......+...+.....|.+.+.+.+.+ ++.+|+=. +|.-
T Consensus 3 ILvlGGT~egr~la~~L~~~g~~v~~s~~t~~~~-----~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA 77 (256)
T TIGR00715 3 VLLMGGTVDSRAIAKGLIAQGIEILVTVTTSEGK-----HLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFA 77 (256)
T ss_pred EEEEechHHHHHHHHHHHhCCCeEEEEEccCCcc-----ccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHH
Confidence 5667775 76566667777787777554322222 223334333444555567778777764 46655422 2211
Q ss_pred CccccccH-HHHHHHHHHcCCEEE
Q 022194 151 PRQQICDI-RKIAEMAHAHGALLL 173 (301)
Q Consensus 151 p~G~~~~l-~~l~~l~~~~~~~li 173 (301)
..+ +-+.+.|++.|+..+
T Consensus 78 -----~~is~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 78 -----AQITTNATAVCKELGIPYV 96 (256)
T ss_pred -----HHHHHHHHHHHHHhCCcEE
Confidence 123 336677887776444
No 460
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=55.94 E-value=1.3e+02 Score=27.64 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=50.2
Q ss_pred HHHhccCCCCeEE-EcCCCCc-cHHHHHhhhcccCCcEEEEecC-CCH-----HHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 85 AVTHLLGTGEEIV-AGDDLYG-GTDRLLSRVTPKTGVVVKRVNT-CDL-----DEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 85 ~~~~~~~~g~~Vl-v~~~~y~-~~~~~~~~~~~~~g~~~~~~~~-~d~-----~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
++..+.+.|.+|+ +..-.|. +....++...+..++.+..... .|+ +.++.+-.....+|++..+....-...
T Consensus 120 LA~~l~~~G~kV~lV~~D~~R~aA~eQLk~~a~~~~vp~~~~~~~~dp~~i~~~~l~~~~~~~~DvViIDTaGr~~~d~~ 199 (429)
T TIGR01425 120 LAYYYQRKGFKPCLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIASEGVEKFKKENFDIIIVDTSGRHKQEDS 199 (429)
T ss_pred HHHHHHHCCCCEEEEcCcccchhHHHHHHHHhhccCCeEEeecCCCCHHHHHHHHHHHHHhCCCCEEEEECCCCCcchHH
Confidence 3333445566655 4333443 3333344556777777654442 243 233333335678899887654221112
Q ss_pred cHHHHHHHHH---HcCCEEEEeCCcC
Q 022194 157 DIRKIAEMAH---AHGALLLVDNSIM 179 (301)
Q Consensus 157 ~l~~l~~l~~---~~~~~li~D~~~~ 179 (301)
-++++.++.+ -..+++++|...+
T Consensus 200 lm~El~~i~~~~~p~e~lLVlda~~G 225 (429)
T TIGR01425 200 LFEEMLQVAEAIQPDNIIFVMDGSIG 225 (429)
T ss_pred HHHHHHHHhhhcCCcEEEEEeccccC
Confidence 2455555544 3458999998755
No 461
>PLN02591 tryptophan synthase
Probab=55.64 E-value=68 Score=26.90 Aligned_cols=80 Identities=14% Similarity=0.110 Sum_probs=46.5
Q ss_pred CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--CHHHHHhhcCCCceEEEEeCCCCCcccc----ccHHHHHHHHHH
Q 022194 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--DLDEVASAIGPWTKLVWVESPTNPRQQI----CDIRKIAEMAHA 167 (301)
Q Consensus 94 ~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--d~~~l~~~l~~~~~~v~i~~~~np~G~~----~~l~~l~~l~~~ 167 (301)
|-|++++..+.... .+...++..|+..+.+-.. +.+.++.........|++.+....||.- ..++++++.+|+
T Consensus 108 ~GviipDLP~ee~~-~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~Vs~~GvTG~~~~~~~~~~~~i~~vk~ 186 (250)
T PLN02591 108 HGLVVPDLPLEETE-ALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYLVSSTGVTGARASVSGRVESLLQELKE 186 (250)
T ss_pred CEEEeCCCCHHHHH-HHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEeeCCCCcCCCcCCchhHHHHHHHHHh
Confidence 56777776653332 2335667777776666532 3455666666666677766555556653 236666666665
Q ss_pred c-CCEEEE
Q 022194 168 H-GALLLV 174 (301)
Q Consensus 168 ~-~~~li~ 174 (301)
+ +.++++
T Consensus 187 ~~~~Pv~v 194 (250)
T PLN02591 187 VTDKPVAV 194 (250)
T ss_pred cCCCceEE
Confidence 3 455554
No 462
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=55.47 E-value=1.2e+02 Score=25.31 Aligned_cols=123 Identities=18% Similarity=0.159 Sum_probs=63.9
Q ss_pred chHHHHHHHHHhhcCCCceEEecch--HHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc--EEEEecCCCHH
Q 022194 55 PTRDALESLLAKLDKADRALCFTSG--MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLD 130 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG--~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~--~~~~~~~~d~~ 130 (301)
+..-++-..+.+..++..++=++++ .+++.++.++ .++.+|+..+.. ..+.......++..|+ ++..+.-+-.+
T Consensus 65 ~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la~al-~~~g~v~tiE~~-~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e 142 (247)
T PLN02589 65 ADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALAL-PEDGKILAMDIN-RENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHHhhC-CCCCEEEEEeCC-HHHHHHHHHHHHHCCCCCceEEEeccHHH
Confidence 3455666667777777766655544 3666554443 444466655543 2223333344444442 33333333333
Q ss_pred HHHhhc-----CCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 131 EVASAI-----GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 131 ~l~~~l-----~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
.+.+.. .+...+|++..-- ......++.+.++. +.|.++++|++.-.|.
T Consensus 143 ~L~~l~~~~~~~~~fD~iFiDadK--~~Y~~y~~~~l~ll-~~GGviv~DNvl~~G~ 196 (247)
T PLN02589 143 VLDQMIEDGKYHGTFDFIFVDADK--DNYINYHKRLIDLV-KVGGVIGYDNTLWNGS 196 (247)
T ss_pred HHHHHHhccccCCcccEEEecCCH--HHhHHHHHHHHHhc-CCCeEEEEcCCCCCCc
Confidence 333332 2467788887442 11222344555544 3478899999976554
No 463
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=55.23 E-value=62 Score=27.41 Aligned_cols=64 Identities=17% Similarity=0.202 Sum_probs=35.0
Q ss_pred ceEEecchHHHH-H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--CHHHHHhh
Q 022194 72 RALCFTSGMAAL-A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--DLDEVASA 135 (301)
Q Consensus 72 ~~i~~~sG~~ai-~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--d~~~l~~~ 135 (301)
..+++|+.|..| . ....+.+.|..|++..-.-.-.....+.+-...++++..++.| +.++++..
T Consensus 7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l 74 (265)
T COG0300 7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERL 74 (265)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence 456777778777 3 5566778887766544332222223334444555555555544 55544443
No 464
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=55.04 E-value=29 Score=32.42 Aligned_cols=95 Identities=16% Similarity=0.136 Sum_probs=47.1
Q ss_pred ecch-HHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--CHH---HHHhhcCCCceEEEEeCC
Q 022194 76 FTSG-MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--DLD---EVASAIGPWTKLVWVESP 148 (301)
Q Consensus 76 ~~sG-~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--d~~---~l~~~l~~~~~~v~i~~~ 148 (301)
+++| |+.. .++...+..|..|++-.|.-.-.......+-+.++.++..+.-. +.+ .+.+....+.++|+.+ .
T Consensus 6 TGsGKT~v~l~~i~~~l~~g~~vLvlvP~i~L~~Q~~~~l~~~f~~~v~vlhs~~~~~er~~~~~~~~~g~~~IVVGT-r 84 (505)
T TIGR00595 6 TGSGKTEVYLQAIEKVLALGKSVLVLVPEIALTPQMIQRFKYRFGSQVAVLHSGLSDSEKLQAWRKVKNGEILVVIGT-R 84 (505)
T ss_pred CCCCHHHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHHHHHHhCCcEEEEECCCCHHHHHHHHHHHHcCCCCEEECC-h
Confidence 4566 5443 45555667777788777765444333333434445545444322 222 2333333455554432 2
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
+ ....|++ .=.++|+||.|..+.
T Consensus 85 s---alf~p~~--------~l~lIIVDEeh~~sy 107 (505)
T TIGR00595 85 S---ALFLPFK--------NLGLIIVDEEHDSSY 107 (505)
T ss_pred H---HHcCccc--------CCCEEEEECCCcccc
Confidence 1 1112221 116888999986543
No 465
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=54.73 E-value=1.2e+02 Score=27.43 Aligned_cols=86 Identities=17% Similarity=0.218 Sum_probs=51.5
Q ss_pred CCCeEE-EcCCCC-ccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC--CCceEEEEeCCCCCccccccHHHHHHHHHH
Q 022194 92 TGEEIV-AGDDLY-GGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (301)
Q Consensus 92 ~g~~Vl-v~~~~y-~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~--~~~~~v~i~~~~np~G~~~~l~~l~~l~~~ 167 (301)
.|.+|. +...+| .+....+...+...|+.+.... +.+++.+.+. .+..+|++..+.........+.++.++.+.
T Consensus 205 ~g~~V~lit~Dt~R~aa~eQL~~~a~~lgvpv~~~~--~~~~l~~~L~~~~~~DlVLIDTaGr~~~~~~~l~el~~~l~~ 282 (388)
T PRK12723 205 KSLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIE--SFKDLKEEITQSKDFDLVLVDTIGKSPKDFMKLAEMKELLNA 282 (388)
T ss_pred CCCeEEEEeccCccHHHHHHHHHHhhcCCcceEeeC--cHHHHHHHHHHhCCCCEEEEcCCCCCccCHHHHHHHHHHHHh
Confidence 455554 333343 3344446677787888765444 4555655443 467888888665544333346677776664
Q ss_pred c----CCEEEEeCCcC
Q 022194 168 H----GALLLVDNSIM 179 (301)
Q Consensus 168 ~----~~~li~D~~~~ 179 (301)
. ..++++|...+
T Consensus 283 ~~~~~e~~LVlsat~~ 298 (388)
T PRK12723 283 CGRDAEFHLAVSSTTK 298 (388)
T ss_pred cCCCCeEEEEEcCCCC
Confidence 3 47788888765
No 466
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=54.66 E-value=70 Score=26.95 Aligned_cols=57 Identities=12% Similarity=0.144 Sum_probs=27.1
Q ss_pred hhcccCCcEEEEecCCCHHHHHhhc---C-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 112 RVTPKTGVVVKRVNTCDLDEVASAI---G-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 112 ~~~~~~g~~~~~~~~~d~~~l~~~l---~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
..+...|++=..++...+++.++.. + .....|.+..|+.+ -+++..+++.-..++.+
T Consensus 111 ~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~lvap~t~------~eri~~i~~~s~gfIY~ 171 (258)
T PRK13111 111 ADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFLVAPTTT------DERLKKIASHASGFVYY 171 (258)
T ss_pred HHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC------HHHHHHHHHhCCCcEEE
Confidence 3444555555555533344333332 2 35566666666654 24455555544444433
No 467
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=54.66 E-value=1.5e+02 Score=26.08 Aligned_cols=79 Identities=16% Similarity=0.133 Sum_probs=42.3
Q ss_pred EEEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 022194 96 IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 96 Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~l~~~-~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li 173 (301)
.++..|........+..+.+..++.+..-.. .+++++++.++.. ..+|-+. ....|.+.+..+++++|+++|+.+.
T Consensus 218 ~~iEqP~~~~~~~~~~~l~~~~~ipi~~dE~~~~~~~~~~~i~~~~~d~v~~k--~~~~GGi~~~~~i~~~a~~~g~~~~ 295 (357)
T cd03316 218 FWFEEPVPPDDLEGLARLRQATSVPIAAGENLYTRWEFRDLLEAGAVDIIQPD--VTKVGGITEAKKIAALAEAHGVRVA 295 (357)
T ss_pred CeEcCCCCccCHHHHHHHHHhCCCCEEeccccccHHHHHHHHHhCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCeEe
Confidence 3555665543333333333333333322221 2567777666533 2232222 2336778888899999999988766
Q ss_pred EeC
Q 022194 174 VDN 176 (301)
Q Consensus 174 ~D~ 176 (301)
.=.
T Consensus 296 ~~~ 298 (357)
T cd03316 296 PHG 298 (357)
T ss_pred ccC
Confidence 543
No 468
>PRK06182 short chain dehydrogenase; Validated
Probab=54.62 E-value=80 Score=26.37 Aligned_cols=73 Identities=11% Similarity=0.136 Sum_probs=42.4
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEEE
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVW 144 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v~ 144 (301)
.+++++|+..+ ..+..+++.|.+|++..-.-.. +... ...++.+...+..|.+.+++.++ ..+.+++
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~----l~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDK----MEDL-ASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHH-HhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 56677776555 3556677788888765432111 1122 12356777778778877766654 3566666
Q ss_pred EeCCCC
Q 022194 145 VESPTN 150 (301)
Q Consensus 145 i~~~~n 150 (301)
.+....
T Consensus 80 ~~ag~~ 85 (273)
T PRK06182 80 NNAGYG 85 (273)
T ss_pred ECCCcC
Confidence 554433
No 469
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=53.79 E-value=1.2e+02 Score=24.81 Aligned_cols=122 Identities=15% Similarity=0.202 Sum_probs=72.4
Q ss_pred eEEecchHHHHHHHHhccCCCCeEE-----EcCCC--Cc---cHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcC
Q 022194 73 ALCFTSGMAALAAVTHLLGTGEEIV-----AGDDL--YG---GTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG 137 (301)
Q Consensus 73 ~i~~~sG~~ai~~~~~~~~~g~~Vl-----v~~~~--y~---~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~ 137 (301)
+.++++|-....++...++.|..|. .+... |. .........++..|+.+...... ..+++.+.+.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l~ 83 (223)
T COG2102 4 IALYSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEALR 83 (223)
T ss_pred EEEEecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHHH
Confidence 4677888777777777777776542 22211 21 22333456677888888888765 3556666665
Q ss_pred C-CceEEEEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCc--cccCccCCCCcEEEeccccc
Q 022194 138 P-WTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSP--VLSRPLELGADIVMHSATKF 201 (301)
Q Consensus 138 ~-~~~~v~i~~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~--~~~~~~~~~~di~~~S~sK~ 201 (301)
. +..+|+ +|.+. ....+-.+|++.|+..+.==-.-.. ........|.++.+.+.+|.
T Consensus 84 ~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa~ 146 (223)
T COG2102 84 RLKVDGIV-------AGAIASEYQKERVERLCEELGLKVYAPLWGRDPEELLEEMVEAGFEAIIVAVSAE 146 (223)
T ss_pred hCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEeecccCCCHHHHHHHHHHcCCeEEEEEEecc
Confidence 2 344555 56664 4778999999998876531110000 01122345777888877775
No 470
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=53.45 E-value=71 Score=28.97 Aligned_cols=94 Identities=19% Similarity=0.305 Sum_probs=50.5
Q ss_pred ceEEecchHHHHHHHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEE-eCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV-ESPT 149 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i-~~~~ 149 (301)
.+++++.|--+-..+..+...| ..|.+.+-.+.-.. .+++..|..+ ..++++.+.+.+ ..+|+. ++..
T Consensus 180 ~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~----~La~~~~~~~-----~~l~el~~~l~~-~DvVissTsa~ 249 (414)
T COG0373 180 KVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAE----ELAKKLGAEA-----VALEELLEALAE-ADVVISSTSAP 249 (414)
T ss_pred eEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHH----HHHHHhCCee-----ecHHHHHHhhhh-CCEEEEecCCC
Confidence 5778887843333444455555 67888776665443 6666777444 346677766654 344333 2333
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
.|.-...++++..+.-+ + ++++|=+-
T Consensus 250 ~~ii~~~~ve~a~~~r~--~-~livDiav 275 (414)
T COG0373 250 HPIITREMVERALKIRK--R-LLIVDIAV 275 (414)
T ss_pred ccccCHHHHHHHHhccc--C-eEEEEecC
Confidence 33222223444333222 2 89999764
No 471
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=53.36 E-value=1.4e+02 Score=25.19 Aligned_cols=56 Identities=11% Similarity=0.147 Sum_probs=33.4
Q ss_pred hhcccCCcEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCcc--ccccHHHHHHHHHH
Q 022194 112 RVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQ--QICDIRKIAEMAHA 167 (301)
Q Consensus 112 ~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G--~~~~l~~l~~l~~~ 167 (301)
.+++.+++++.-.-.- ..+.++.+..-.+.+|++.-|.-|.+ .+.+++++.+.+++
T Consensus 191 al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~~~~~~~~~~el~~~l~~ 253 (256)
T TIGR00715 191 ALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIPGVAIFDDISQLNQFVAR 253 (256)
T ss_pred HHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCCCCccCCCHHHHHHHHHH
Confidence 4555555555333311 24666666666778888877765433 44677777777665
No 472
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=53.24 E-value=1.6e+02 Score=26.98 Aligned_cols=123 Identities=17% Similarity=0.209 Sum_probs=62.9
Q ss_pred HHHHHHHHHhhcCCC----------ceEEe----cch-HHHH-HHHHhccCCCCeEE-EcCCCCcc-HHHHHhhhcccCC
Q 022194 57 RDALESLLAKLDKAD----------RALCF----TSG-MAAL-AAVTHLLGTGEEIV-AGDDLYGG-TDRLLSRVTPKTG 118 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~----------~~i~~----~sG-~~ai-~~~~~~~~~g~~Vl-v~~~~y~~-~~~~~~~~~~~~g 118 (301)
...+.+.+.+.++.. ..+++ ++| |... .++..+.+.|.+|+ +....|.+ ....+..++...+
T Consensus 71 ~~~v~~~L~~~l~~~~~~~~~~~~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D~~R~aa~eQL~~la~~~g 150 (437)
T PRK00771 71 IKIVYEELVKLLGEETEPLVLPLKPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAADTYRPAAYDQLKQLAEKIG 150 (437)
T ss_pred HHHHHHHHHHHhCCCccccccCCCCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHHHHcC
Confidence 455666666665431 23332 344 3333 34444555666665 44444433 2333555666777
Q ss_pred cEEEEecC-CCH-HHHHhhcC--CCceEEEEeCCCCCc---cccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 119 VVVKRVNT-CDL-DEVASAIG--PWTKLVWVESPTNPR---QQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 119 ~~~~~~~~-~d~-~~l~~~l~--~~~~~v~i~~~~np~---G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
+.+...+. .++ +.+.+++. ....+|++..+.... -...++..+.+++....+++++|...+
T Consensus 151 vp~~~~~~~~d~~~i~~~al~~~~~~DvVIIDTAGr~~~d~~lm~El~~l~~~~~pdevlLVvda~~g 218 (437)
T PRK00771 151 VPFYGDPDNKDAVEIAKEGLEKFKKADVIIVDTAGRHALEEDLIEEMKEIKEAVKPDEVLLVIDATIG 218 (437)
T ss_pred CcEEecCCccCHHHHHHHHHHHhhcCCEEEEECCCcccchHHHHHHHHHHHHHhcccceeEEEecccc
Confidence 76654331 233 22333332 223788887664321 111235556666666789999997654
No 473
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=53.23 E-value=47 Score=24.87 Aligned_cols=61 Identities=16% Similarity=0.202 Sum_probs=43.7
Q ss_pred HHHhhhcccCCcEEEEecCC-CHHHHHhh-cCCCceEEEEeCCCCCccccccHHHHHHHHHHcCC
Q 022194 108 RLLSRVTPKTGVVVKRVNTC-DLDEVASA-IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGA 170 (301)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~-d~~~l~~~-l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~ 170 (301)
.....+++..|.+++....+ +++++.++ .+.++.+|.+++-.. .....++++.+.+++.|.
T Consensus 19 ~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~--~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 19 KILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYG--HGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--cCHHHHHHHHHHHHHCCC
Confidence 34457788999999998876 66666544 456788888775553 344568899999888753
No 474
>PRK10867 signal recognition particle protein; Provisional
Probab=53.14 E-value=1.6e+02 Score=27.03 Aligned_cols=95 Identities=18% Similarity=0.200 Sum_probs=52.5
Q ss_pred HHHHhccCC-CCeEE-EcCCCCcc-HHHHHhhhcccCCcEEEEecC-CCHHHHHh-h----cCCCceEEEEeCCCCCc--
Q 022194 84 AAVTHLLGT-GEEIV-AGDDLYGG-TDRLLSRVTPKTGVVVKRVNT-CDLDEVAS-A----IGPWTKLVWVESPTNPR-- 152 (301)
Q Consensus 84 ~~~~~~~~~-g~~Vl-v~~~~y~~-~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~-~----l~~~~~~v~i~~~~np~-- 152 (301)
..+..+.+. |.+|+ +..-.|-+ ....|...++..|+.+..... .|+..+.. . ......+|++..+....
T Consensus 119 kLA~~l~~~~G~kV~lV~~D~~R~aa~eQL~~~a~~~gv~v~~~~~~~dp~~i~~~a~~~a~~~~~DvVIIDTaGrl~~d 198 (433)
T PRK10867 119 KLAKYLKKKKKKKVLLVAADVYRPAAIEQLKTLGEQIGVPVFPSGDGQDPVDIAKAALEEAKENGYDVVIVDTAGRLHID 198 (433)
T ss_pred HHHHHHHHhcCCcEEEEEccccchHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcccC
Confidence 344445444 66554 43334443 334555667788888766532 25544432 2 22457788887665421
Q ss_pred -cccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 153 -QQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 153 -G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
.....+..+.++++...+++++|...
T Consensus 199 ~~lm~eL~~i~~~v~p~evllVlda~~ 225 (433)
T PRK10867 199 EELMDELKAIKAAVNPDEILLVVDAMT 225 (433)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEeccc
Confidence 11223555555555667899999764
No 475
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=52.48 E-value=43 Score=23.76 Aligned_cols=84 Identities=17% Similarity=0.042 Sum_probs=49.4
Q ss_pred EEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcc
Q 022194 74 LCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQ 153 (301)
Q Consensus 74 i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G 153 (301)
++++.|.-+...+..+.+.+..|++-+...... ..+...+..+..-+..+.+.++++--.+.+.+++..++-
T Consensus 2 vI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~-----~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d--- 73 (116)
T PF02254_consen 2 VIIGYGRIGREIAEQLKEGGIDVVVIDRDPERV-----EELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDD--- 73 (116)
T ss_dssp EEES-SHHHHHHHHHHHHTTSEEEEEESSHHHH-----HHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSH---
T ss_pred EEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHH-----HHHHhcccccccccchhhhHHhhcCccccCEEEEccCCH---
Confidence 455666555556666666554565555443333 334456688888888899999877656777777665421
Q ss_pred ccccHHHHHHHHHH
Q 022194 154 QICDIRKIAEMAHA 167 (301)
Q Consensus 154 ~~~~l~~l~~l~~~ 167 (301)
..--.++..+|+
T Consensus 74 --~~n~~~~~~~r~ 85 (116)
T PF02254_consen 74 --EENLLIALLARE 85 (116)
T ss_dssp --HHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHH
Confidence 122345556666
No 476
>PTZ00293 thymidine kinase; Provisional
Probab=52.43 E-value=46 Score=27.11 Aligned_cols=96 Identities=14% Similarity=0.114 Sum_probs=55.8
Q ss_pred cch-H-HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccc
Q 022194 77 TSG-M-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (301)
Q Consensus 77 ~sG-~-~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~ 154 (301)
.+| | +.+..+.+....|.++++..|.-..-...-..+....|....-+...+..++.+.+ .+..+|++.-.+.-+
T Consensus 14 fSGKTteLLr~i~~y~~ag~kv~~~kp~~DtR~~~~~~I~Sh~g~~~~a~~v~~~~e~~~~~-~~~dvI~IDEaQFf~-- 90 (211)
T PTZ00293 14 FSGKTTELMRLVKRFTYSEKKCVVIKYSKDTRYSDEQNISSHDKQMLKAIKVSKLKEVLETA-KNYDVIAIDEGQFFP-- 90 (211)
T ss_pred CChHHHHHHHHHHHHHHcCCceEEEEecccccCCCCCcEEecCCCcceeEEcCCHHHHHHhc-cCCCEEEEEchHhhH--
Confidence 345 4 34556666655677776655532211000001223345544445555666666655 467889988777642
Q ss_pred cccHHHHHHHHHHcCCEEEEeCC
Q 022194 155 ICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 155 ~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
++.++++.+.+.|+.+|+-.-
T Consensus 91 --~i~~~~~~l~~~g~~VivaGL 111 (211)
T PTZ00293 91 --DLVEFSEAAANLGKIVIVAAL 111 (211)
T ss_pred --hHHHHHHHHHHCCCeEEEEec
Confidence 477778888888999988654
No 477
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=52.31 E-value=15 Score=34.07 Aligned_cols=30 Identities=10% Similarity=0.138 Sum_probs=26.8
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
....|+..++++|++.||++|+.||+|-+.
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 445688889999999999999999999994
No 478
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=52.15 E-value=57 Score=31.05 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=56.8
Q ss_pred cchH-HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-CHHH---HHhhcC-CCceEEEEeCCCC
Q 022194 77 TSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDE---VASAIG-PWTKLVWVESPTN 150 (301)
Q Consensus 77 ~sG~-~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-d~~~---l~~~l~-~~~~~v~i~~~~n 150 (301)
|+|- +..+.+.+++.+|-+++|++.- .-.... -..++..|+.+..++.. +.++ +...+. ...++++++.-.-
T Consensus 41 TGgGKSlCyQiPAll~~G~TLVVSPLi-SLM~DQ-V~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l~~g~~klLyisPErl 118 (590)
T COG0514 41 TGGGKSLCYQIPALLLEGLTLVVSPLI-SLMKDQ-VDQLEAAGIRAAYLNSTLSREERQQVLNQLKSGQLKLLYISPERL 118 (590)
T ss_pred CCCCcchHhhhHHHhcCCCEEEECchH-HHHHHH-HHHHHHcCceeehhhcccCHHHHHHHHHHHhcCceeEEEECchhh
Confidence 4443 6668888888899777775432 111111 14466788888777754 4333 333333 5688888763221
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
.+. .+.+..+ +-.-..+++||+|+.+-+
T Consensus 119 ~~~---~f~~~L~--~~~i~l~vIDEAHCiSqW 146 (590)
T COG0514 119 MSP---RFLELLK--RLPISLVAIDEAHCISQW 146 (590)
T ss_pred cCh---HHHHHHH--hCCCceEEechHHHHhhc
Confidence 111 2222222 334579999999975433
No 479
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=51.90 E-value=91 Score=26.19 Aligned_cols=109 Identities=15% Similarity=0.197 Sum_probs=56.6
Q ss_pred HHHHHHHHHhhcCCCceEEecchH-HHHHHHHhccCCCCeEE---EcCCCCcc-HHHHHhhhcccCCcEEEEecCCCHHH
Q 022194 57 RDALESLLAKLDKADRALCFTSGM-AALAAVTHLLGTGEEIV---AGDDLYGG-TDRLLSRVTPKTGVVVKRVNTCDLDE 131 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG~-~ai~~~~~~~~~g~~Vl---v~~~~y~~-~~~~~~~~~~~~g~~~~~~~~~d~~~ 131 (301)
.+++.+.+.+.. .-.+.+++|. +.+.+.++.-.-|++|+ +..|.-+. ........++..|++-..++.+-++
T Consensus 7 l~~l~~~ik~~~--kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~~- 83 (269)
T COG1606 7 LERLKKAIKEKK--KVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRMD- 83 (269)
T ss_pred HHHHHHHHhhcC--eEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhcc-
Confidence 344555554444 3356788886 33333333211245544 33333332 2233446666777766666543222
Q ss_pred HHhhcCCCceEEEEeCCCCCccccc--cHHHHHHHHHHcCCEEEEeCCc
Q 022194 132 VASAIGPWTKLVWVESPTNPRQQIC--DIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 132 l~~~l~~~~~~v~i~~~~np~G~~~--~l~~l~~l~~~~~~~li~D~~~ 178 (301)
.+ +..++.|+.=.+- =.+.|.+.++++|.-+++|.+-
T Consensus 84 -~~---------~~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtN 122 (269)
T COG1606 84 -PE---------FKENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTN 122 (269)
T ss_pred -hh---------hccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCc
Confidence 01 1223444322221 2677999999999999999984
No 480
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=51.70 E-value=78 Score=21.89 Aligned_cols=64 Identities=14% Similarity=0.111 Sum_probs=39.2
Q ss_pred HhhhcccCCcEEEEe--c-CC--CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 110 LSRVTPKTGVVVKRV--N-TC--DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 110 ~~~~~~~~g~~~~~~--~-~~--d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
+...++..|.+.... + -. ....+++.+.+.--+|+++...+ -.-...+.+.|+++|++++.=..
T Consensus 15 ~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vs----H~~~~~vk~~akk~~ip~~~~~~ 83 (97)
T PF10087_consen 15 YKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVS----HNAMWKVKKAAKKYGIPIIYSRS 83 (97)
T ss_pred HHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcC----hHHHHHHHHHHHHcCCcEEEECC
Confidence 457778889988888 2 11 23347777764333444333322 12357788899999998876443
No 481
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=51.69 E-value=1.6e+02 Score=26.31 Aligned_cols=73 Identities=19% Similarity=0.163 Sum_probs=36.6
Q ss_pred EEecchHHHHHHHHhccCCCC--eEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCC
Q 022194 74 LCFTSGMAALAAVTHLLGTGE--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 74 i~~~sG~~ai~~~~~~~~~g~--~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~ 148 (301)
+++++|.-+-.++..+.+..+ +|++.+-.-....+.. .......++...++..|.+++.+.+++. ++|+-+.+
T Consensus 2 lvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~l~~~~~~~-dvVin~~g 76 (386)
T PF03435_consen 2 LVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLA-EKLLGDRVEAVQVDVNDPESLAELLRGC-DVVINCAG 76 (386)
T ss_dssp EEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHH-T--TTTTEEEEE--TTTHHHHHHHHTTS-SEEEE-SS
T ss_pred EEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHH-hhccccceeEEEEecCCHHHHHHHHhcC-CEEEECCc
Confidence 455556533333333444332 6776654433222111 1114456788888888999999888755 66654433
No 482
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=51.47 E-value=1e+02 Score=24.68 Aligned_cols=73 Identities=11% Similarity=0.146 Sum_probs=48.9
Q ss_pred CeEEEcCC--CCccH-HHHHhhhcccCCcEEEEecCC-CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 94 EEIVAGDD--LYGGT-DRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 94 ~~Vlv~~~--~y~~~-~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
.+|++..+ ..|.. .......++..|.+++++..+ +.+++.+.+. .++.+|.++..... ....++++++..++.
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~--~~~~~~~~i~~lr~~ 160 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTT--TMGGMKEVIEALKEA 160 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHHHHHHC
Confidence 35554433 34433 344567889999999888765 6777776665 67888887755443 356688888888875
No 483
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=51.39 E-value=34 Score=28.09 Aligned_cols=49 Identities=12% Similarity=0.071 Sum_probs=35.4
Q ss_pred HHHHHhhcCCC-ceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCC
Q 022194 129 LDEVASAIGPW-TKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 129 ~~~l~~~l~~~-~~~v~i~~~~np~G~~~~-l~~l~~l~~~~~~~li~D~~ 177 (301)
++.+++++... +.+|.+-..+-+.-.... .++|.++|+++|+.+|+++-
T Consensus 29 ~~~l~~al~~G~v~~vQlR~K~l~~~~~~~~a~~l~~l~~~~gv~liINd~ 79 (221)
T PRK06512 29 AKLLRAALQGGDVASVILPQYGLDEATFQKQAEKLVPVIQEAGAAALIAGD 79 (221)
T ss_pred HHHHHHHHcCCCccEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCEEEEeCH
Confidence 46777888877 588877655544333333 57799999999999988764
No 484
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=51.23 E-value=52 Score=26.32 Aligned_cols=35 Identities=11% Similarity=0.072 Sum_probs=26.8
Q ss_pred ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 140 TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 140 ~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
-.+|+++..+|..|.+.|.+.-+++++++|+.++.
T Consensus 113 kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 113 AIVIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred cEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 34666787887788888887778999999886653
No 485
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=51.12 E-value=1.5e+02 Score=25.91 Aligned_cols=98 Identities=10% Similarity=0.090 Sum_probs=51.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc------cCCcEEEEecCCCHHHHHhhcCCCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP------KTGVVVKRVNTCDLDEVASAIGPWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~------~~g~~~~~~~~~d~~~l~~~l~~~~~~v 143 (301)
.-+++++|+.-+ .++..+++.|.+|+..+............... ...+.+...+..|.+.+++.+++ +..|
T Consensus 16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~-~d~V 94 (348)
T PRK15181 16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN-VDYV 94 (348)
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC-CCEE
Confidence 357777776444 57777887887776554432222111111111 11345555566688888877764 5555
Q ss_pred EEeC-CCCCcccc-c----------cHHHHHHHHHHcCC
Q 022194 144 WVES-PTNPRQQI-C----------DIRKIAEMAHAHGA 170 (301)
Q Consensus 144 ~i~~-~~np~G~~-~----------~l~~l~~l~~~~~~ 170 (301)
+-.. ........ . -...|.+.|+++++
T Consensus 95 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~ 133 (348)
T PRK15181 95 LHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV 133 (348)
T ss_pred EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5432 21111111 1 13468889999876
No 486
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=50.53 E-value=85 Score=26.79 Aligned_cols=80 Identities=19% Similarity=0.219 Sum_probs=54.9
Q ss_pred eEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 022194 95 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 95 ~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li 173 (301)
..+..-|.|....+..+.. ..++.+++++.. -.|.+.++++..+++|++-+-+=| +.|.-++.+.+++.+..+|
T Consensus 46 ~~~~g~PVf~tV~EA~~~~--~a~~svI~Vp~~~aadai~EAida~i~liv~ITEgIP---~~D~~~~~~~a~~~g~~ii 120 (293)
T COG0074 46 QTILGLPVFNTVEEAVKET--GANASVIFVPPPFAADAILEAIDAGIKLVVIITEGIP---VLDMLELKRYAREKGTRLI 120 (293)
T ss_pred eEEcCccHHHHHHHHHHhh--CCCEEEEecCcHHHHHHHHHHHhCCCcEEEEEeCCCC---HHHHHHHHHHHHhcCCEEE
Confidence 4445567777776555443 456788888865 467788888877887766544444 4678888999999998877
Q ss_pred EeCCcC
Q 022194 174 VDNSIM 179 (301)
Q Consensus 174 ~D~~~~ 179 (301)
==++-+
T Consensus 121 GPncpG 126 (293)
T COG0074 121 GPNCPG 126 (293)
T ss_pred CCCCCc
Confidence 655543
No 487
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=50.48 E-value=1.5e+02 Score=25.22 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=24.0
Q ss_pred hcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 135 AIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 135 ~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
.+.++..+|.++. +|...++-+.++.++++|+.+|.
T Consensus 174 ~~~~~Dv~i~iS~----sG~t~e~i~~a~~ak~~ga~vIa 209 (281)
T COG1737 174 LLTPGDVVIAISF----SGYTREIVEAAELAKERGAKVIA 209 (281)
T ss_pred hCCCCCEEEEEeC----CCCcHHHHHHHHHHHHCCCcEEE
Confidence 3344545555442 46667888999999999876653
No 488
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=50.39 E-value=55 Score=24.38 Aligned_cols=60 Identities=13% Similarity=0.132 Sum_probs=42.6
Q ss_pred HHHhhhcccCCcEEEEecCC-CHHHH-HhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC
Q 022194 108 RLLSRVTPKTGVVVKRVNTC-DLDEV-ASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 169 (301)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~-d~~~l-~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~ 169 (301)
.....+++..|.+++....+ +++++ +++.+.+..+|.+++-.. .....++++++..++.+
T Consensus 20 ~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~--~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 20 KVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAG--GHLTLVPALRKELDKLG 81 (132)
T ss_pred HHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchh--hhHHHHHHHHHHHHhcC
Confidence 44567788999999988865 55555 555667888888876553 34445788888888764
No 489
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=50.04 E-value=75 Score=29.38 Aligned_cols=93 Identities=20% Similarity=0.173 Sum_probs=51.4
Q ss_pred CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 71 ~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
..+++++.|-.++.++..+.+.|.+|.+.+..-..........++..|+++..-. +.+ ......+|+++....
T Consensus 17 ~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~--~~~-----~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 17 LRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGP--GPT-----LPEDTDLVVTSPGWR 89 (480)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECC--Ccc-----ccCCCCEEEECCCcC
Confidence 3578888888887766666677888877653221111112234556677764422 111 123456666553222
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeC
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~ 176 (301)
|. ..+...+++.|+.++-|-
T Consensus 90 ~~------~~~~~~a~~~gi~v~~~~ 109 (480)
T PRK01438 90 PD------APLLAAAADAGIPVWGEV 109 (480)
T ss_pred CC------CHHHHHHHHCCCeecchH
Confidence 21 234556678888886553
No 490
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=49.69 E-value=2e+02 Score=26.93 Aligned_cols=115 Identities=17% Similarity=0.243 Sum_probs=63.3
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHH---HHhhhcccC-CcEEEEecCCCHHHHHhhcCCCceEEEEe-CCCC-----
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDR---LLSRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVWVE-SPTN----- 150 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~---~~~~~~~~~-g~~~~~~~~~d~~~l~~~l~~~~~~v~i~-~~~n----- 150 (301)
+.+..+..+++.|-.+++-+..+..... .++.+-+.+ ++.+.-=+..+.++.+.+++-...+|.+. .|..
T Consensus 241 ~~~~~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aGad~I~vg~g~Gs~~~t~ 320 (495)
T PTZ00314 241 EDIERAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAGADGLRIGMGSGSICITQ 320 (495)
T ss_pred HHHHHHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcCCCEEEECCcCCcccccc
Confidence 3345556666666666665655442221 222222222 33433334557888888887777777653 2211
Q ss_pred -Ccccc----ccHHHHHHHHHHcCCEEEEeCCcCCcc-ccCccCCCCcEEE
Q 022194 151 -PRQQI----CDIRKIAEMAHAHGALLLVDNSIMSPV-LSRPLELGADIVM 195 (301)
Q Consensus 151 -p~G~~----~~l~~l~~l~~~~~~~li~D~~~~~~~-~~~~~~~~~di~~ 195 (301)
.+|.- ..+.++++.|+++++.+|.|.-...+. .......|+|.++
T Consensus 321 ~~~~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm 371 (495)
T PTZ00314 321 EVCAVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVM 371 (495)
T ss_pred hhccCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 01111 135678888999999999998754332 2234455666444
No 491
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=49.35 E-value=64 Score=27.67 Aligned_cols=60 Identities=20% Similarity=0.142 Sum_probs=38.7
Q ss_pred CCcEEEEecCC-CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 117 TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 117 ~g~~~~~~~~~-d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
..+-+..++.. -++.++++....++.+++-+...+- ..-++|.++|+++|+.++==++.+
T Consensus 64 ~Dlavi~vpa~~v~~~l~e~~~~Gvk~avIis~Gf~e---~~~~~l~~~a~~~girilGPNc~G 124 (286)
T TIGR01019 64 ANASVIFVPAPFAADAIFEAIDAGIELIVCITEGIPV---HDMLKVKRYMEESGTRLIGPNCPG 124 (286)
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEEECCCCce
Confidence 34555555544 3566677777788766654433321 134789999999999888655554
No 492
>PLN02253 xanthoxin dehydrogenase
Probab=49.35 E-value=53 Score=27.58 Aligned_cols=75 Identities=12% Similarity=0.101 Sum_probs=42.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++++|+..| ..+..+++.|.+|++.+..-...............+.+...+..|.+.+++.+. .++..+
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~l 98 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIM 98 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence 457778887666 355667788888877644322221111111111235566667778877776665 356666
Q ss_pred EEe
Q 022194 144 WVE 146 (301)
Q Consensus 144 ~i~ 146 (301)
+-+
T Consensus 99 i~~ 101 (280)
T PLN02253 99 VNN 101 (280)
T ss_pred EEC
Confidence 544
No 493
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=49.35 E-value=1.6e+02 Score=24.71 Aligned_cols=78 Identities=9% Similarity=0.065 Sum_probs=42.5
Q ss_pred EEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 97 VAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 97 lv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
++..|........+..+.+..++.+..-.. .+..++++.+.. ...+|.+. +. ..|.+.+..+++++|+++|+.+..
T Consensus 159 ~iEeP~~~~d~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~~k-~~-~~GGi~~~~~~~~~A~~~gi~~~~ 236 (265)
T cd03315 159 YVEQPLPADDLEGRAALARATDTPIMADESAFTPHDAFRELALGAADAVNIK-TA-KTGGLTKAQRVLAVAEALGLPVMV 236 (265)
T ss_pred EEECCCCcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEe-cc-cccCHHHHHHHHHHHHHcCCcEEe
Confidence 455554433333333444444443332221 256666666653 34444333 33 367888888899999999887776
Q ss_pred eC
Q 022194 175 DN 176 (301)
Q Consensus 175 D~ 176 (301)
=.
T Consensus 237 ~~ 238 (265)
T cd03315 237 GS 238 (265)
T ss_pred cC
Confidence 53
No 494
>PRK14873 primosome assembly protein PriA; Provisional
Probab=49.17 E-value=70 Score=31.14 Aligned_cols=68 Identities=16% Similarity=0.068 Sum_probs=43.0
Q ss_pred cch-HHHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC-cEEEEecCC--CH---HHHHhhcCCCceEEE
Q 022194 77 TSG-MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNTC--DL---DEVASAIGPWTKLVW 144 (301)
Q Consensus 77 ~sG-~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g-~~~~~~~~~--d~---~~l~~~l~~~~~~v~ 144 (301)
+|| |+.+ .++...+..|..+|+--|...-.......+.+.+| ..+..+... +. +.+.++...+.++|+
T Consensus 170 GSGKTevyl~~i~~~l~~Gk~vLvLvPEi~lt~q~~~rl~~~f~~~~v~~lhS~l~~~~R~~~w~~~~~G~~~IVi 245 (665)
T PRK14873 170 GEDWARRLAAAAAATLRAGRGALVVVPDQRDVDRLEAALRALLGAGDVAVLSAGLGPADRYRRWLAVLRGQARVVV 245 (665)
T ss_pred CCcHHHHHHHHHHHHHHcCCeEEEEecchhhHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHHHhCCCCcEEE
Confidence 566 4655 47777788888898888888877766666666665 445444432 33 344444455566665
No 495
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
Probab=48.77 E-value=1.9e+02 Score=25.38 Aligned_cols=48 Identities=27% Similarity=0.233 Sum_probs=33.7
Q ss_pred HHHHHHHHHhhcCCCceEEecch---H----HHH-----HHHHhccCCCCeEEEcCCCCccHH
Q 022194 57 RDALESLLAKLDKADRALCFTSG---M----AAL-----AAVTHLLGTGEEIVAGDDLYGGTD 107 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~sG---~----~ai-----~~~~~~~~~g~~Vlv~~~~y~~~~ 107 (301)
..+|+++|.+.||.++++++.+- . ..+ ..+...+++||.|-+. |+.+.
T Consensus 67 ~~~Le~~L~~~fgL~~a~VVp~~~~~~~~~~~~lg~aaA~~l~~~l~~gdvigV~---wGrTv 126 (321)
T COG2390 67 CLELEQQLKERFGLKEAIVVPSDSDADDSILRRLGRAAAQYLESLLKPGDVIGVG---WGRTL 126 (321)
T ss_pred hHHHHHHHHHhcCCCeEEEEcCCCCCchHHHHHHHHHHHHHHHHhCCCCCEEEEe---ccHHH
Confidence 67899999999999988888742 1 112 2344568999977774 55554
No 496
>PRK06179 short chain dehydrogenase; Provisional
Probab=48.38 E-value=1.1e+02 Score=25.36 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=43.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++++|+..+ ..+..+.+.|.+|++....-. ......++.+...+..|.++++++++ ..+.++
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPA-------RAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChh-------hccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence 357777777666 356667788888876543211 11123456777777778887777665 245666
Q ss_pred EEeCCC
Q 022194 144 WVESPT 149 (301)
Q Consensus 144 ~i~~~~ 149 (301)
+.+...
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 655433
No 497
>PRK06138 short chain dehydrogenase; Provisional
Probab=48.17 E-value=1.5e+02 Score=24.13 Aligned_cols=77 Identities=10% Similarity=0.153 Sum_probs=39.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++++|+..+ .++..+++.|.+|++..-.-...............+.+..++..|.+.+++.+. .++.+|
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~v 85 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVL 85 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 357777777665 355667777877765432211111111111111224555566667777766554 356666
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 86 i~~ag 90 (252)
T PRK06138 86 VNNAG 90 (252)
T ss_pred EECCC
Confidence 65533
No 498
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=47.65 E-value=66 Score=24.33 Aligned_cols=47 Identities=9% Similarity=0.181 Sum_probs=29.9
Q ss_pred HHHhhcC-CCceEEEEe-CCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 131 EVASAIG-PWTKLVWVE-SPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 131 ~l~~~l~-~~~~~v~i~-~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
.+.+.+. .++.+|+.. .|..+.+...+...|.+.|-+++++++..-.
T Consensus 66 ~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 66 QIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred hHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 3444554 456665543 2244444355788999999999998886544
No 499
>PF02581 TMP-TENI: Thiamine monophosphate synthase/TENI; InterPro: IPR003733 Thiamine monophosphate synthase (TMP) (2.5.1.3 from EC) catalyzes the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl)thiazole phosphate to yield thiamine phosphate in the thiamine biosynthesis pathway []. TENI, a protein from Bacillus subtilis that regulates the production of several extracellular enzymes by reducing alkaline protease production belongs to this group [].; GO: 0004789 thiamine-phosphate diphosphorylase activity, 0009228 thiamine biosynthetic process; PDB: 3NL5_A 3NL2_A 3NM1_A 3NM3_C 3NL6_B 3NL3_A 3CEU_A 3O63_B 3QH2_C 1YAD_D ....
Probab=47.56 E-value=25 Score=27.66 Aligned_cols=49 Identities=18% Similarity=0.413 Sum_probs=34.7
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCC
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~G~~~~-l~~l~~l~~~~~~~li~D~~ 177 (301)
.+.++++++.....|.+-.+....-.... .++|.++|+++++.+++++-
T Consensus 15 ~~~l~~~~~~gv~~v~lR~k~~~~~~~~~~a~~l~~~~~~~~~~liin~~ 64 (180)
T PF02581_consen 15 LEQLEAALAAGVDLVQLREKDLSDEELLELARRLAELCQKYGVPLIINDR 64 (180)
T ss_dssp HHHHHHHHHTT-SEEEEE-SSS-HHHHHHHHHHHHHHHHHTTGCEEEES-
T ss_pred HHHHHHHHHCCCcEEEEcCCCCCccHHHHHHHHHHHHhhcceEEEEecCC
Confidence 46677778778888888877655544544 78899999999988887764
No 500
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=47.50 E-value=1.2e+02 Score=24.71 Aligned_cols=77 Identities=13% Similarity=0.161 Sum_probs=40.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++++|+..+ .++..+++.|.+|++....-......+....+..+ +.+..++..|.+.+.+.++ .++.
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVD 86 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467778887666 35666777888887532211111111111222233 3444555557776666554 2467
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+|+.+..
T Consensus 87 ~vi~~ag 93 (247)
T PRK12935 87 ILVNNAG 93 (247)
T ss_pred EEEECCC
Confidence 7765533
Done!