Query 022194
Match_columns 301
No_of_seqs 167 out of 2023
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 15:28:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ndn_A O-succinylhomoserine su 100.0 2.4E-41 8.4E-46 302.7 28.2 295 6-300 24-327 (414)
2 3nmy_A Xometc, cystathionine g 100.0 3.3E-41 1.1E-45 300.6 27.7 293 8-300 19-314 (400)
3 3ri6_A O-acetylhomoserine sulf 100.0 2.1E-40 7.2E-45 297.4 24.7 294 6-300 24-347 (430)
4 3qhx_A Cystathionine gamma-syn 100.0 2.4E-39 8.4E-44 288.3 31.3 293 8-300 17-312 (392)
5 2fq6_A Cystathionine beta-lyas 100.0 3.8E-39 1.3E-43 288.3 26.1 292 8-300 25-329 (415)
6 3cog_A Cystathionine gamma-lya 100.0 3.5E-38 1.2E-42 281.7 29.3 293 8-300 18-313 (403)
7 1qgn_A Protein (cystathionine 100.0 8.5E-38 2.9E-42 281.3 30.3 290 10-300 58-360 (445)
8 1ibj_A CBL, cystathionine beta 100.0 1.3E-37 4.6E-42 282.0 31.6 292 8-299 86-377 (464)
9 3acz_A Methionine gamma-lyase; 100.0 4.3E-37 1.5E-41 273.6 30.3 294 6-300 3-305 (389)
10 1n8p_A Cystathionine gamma-lya 100.0 6.4E-36 2.2E-40 266.3 27.0 288 8-297 7-301 (393)
11 1gc0_A Methionine gamma-lyase; 100.0 9.9E-36 3.4E-40 265.7 25.9 293 7-299 8-311 (398)
12 1e5e_A MGL, methionine gamma-l 100.0 2.3E-35 8E-40 263.6 28.1 291 9-300 8-310 (404)
13 1cs1_A CGS, protein (cystathio 100.0 4.5E-34 1.5E-38 253.9 31.2 288 9-296 5-294 (386)
14 2cb1_A O-acetyl homoserine sul 100.0 5.4E-34 1.8E-38 255.5 29.4 290 10-300 4-329 (412)
15 2rfv_A Methionine gamma-lyase; 100.0 6E-34 2E-38 254.1 28.3 291 9-299 9-310 (398)
16 2ctz_A O-acetyl-L-homoserine s 100.0 7E-34 2.4E-38 255.4 28.4 291 10-300 4-338 (421)
17 1pff_A Methionine gamma-lyase; 100.0 1.2E-30 4E-35 227.1 23.0 238 59-296 2-242 (331)
18 3i16_A Aluminum resistance pro 100.0 1.2E-29 4.3E-34 226.6 22.4 230 55-289 73-332 (427)
19 3jzl_A Putative cystathionine 100.0 6.1E-29 2.1E-33 221.4 24.8 230 54-288 58-314 (409)
20 3hvy_A Cystathionine beta-lyas 100.0 4.1E-29 1.4E-33 223.2 23.5 236 46-289 68-332 (427)
21 3nra_A Aspartate aminotransfer 100.0 8.3E-29 2.8E-33 221.1 20.4 256 11-275 39-330 (407)
22 3tqx_A 2-amino-3-ketobutyrate 100.0 3.8E-27 1.3E-31 209.7 21.0 251 11-271 43-318 (399)
23 2w8t_A SPT, serine palmitoyltr 100.0 4.2E-27 1.4E-31 211.7 19.7 250 11-271 64-335 (427)
24 3kki_A CAI-1 autoinducer synth 99.9 2.2E-27 7.5E-32 212.3 16.2 251 11-271 59-327 (409)
25 3dzz_A Putative pyridoxal 5'-p 99.9 1.8E-26 6.3E-31 204.8 21.7 254 12-275 28-314 (391)
26 2z61_A Probable aspartate amin 99.9 5.2E-26 1.8E-30 200.6 24.2 247 12-271 30-296 (370)
27 3kax_A Aminotransferase, class 99.9 3.7E-26 1.3E-30 202.2 22.7 255 11-275 24-310 (383)
28 1b5p_A Protein (aspartate amin 99.9 4.6E-26 1.6E-30 202.2 23.3 218 48-271 63-310 (385)
29 3a2b_A Serine palmitoyltransfe 99.9 3.4E-26 1.2E-30 203.8 22.3 251 11-271 43-314 (398)
30 4dq6_A Putative pyridoxal phos 99.9 2.6E-26 8.8E-31 203.8 21.3 254 11-275 32-318 (391)
31 1j32_A Aspartate aminotransfer 99.9 6.8E-26 2.3E-30 201.1 23.7 254 11-275 30-314 (388)
32 3ffh_A Histidinol-phosphate am 99.9 4.9E-26 1.7E-30 200.2 21.5 248 11-275 32-299 (363)
33 1bs0_A Protein (8-amino-7-oxon 99.9 7.2E-26 2.5E-30 200.7 22.7 250 11-271 39-309 (384)
34 1fc4_A 2-amino-3-ketobutyrate 99.9 3.9E-26 1.3E-30 203.5 21.0 251 11-271 45-319 (401)
35 3fdb_A Beta C-S lyase, putativ 99.9 3.1E-26 1E-30 202.4 19.2 254 11-274 23-301 (377)
36 1o4s_A Aspartate aminotransfer 99.9 8.9E-26 3E-30 200.6 22.2 249 12-271 42-316 (389)
37 3op7_A Aminotransferase class 99.9 4.9E-26 1.7E-30 201.1 20.3 214 57-276 65-300 (375)
38 3b46_A Aminotransferase BNA3; 99.9 3.6E-26 1.2E-30 206.8 19.1 252 11-271 57-350 (447)
39 1fg7_A Histidinol phosphate am 99.9 5E-25 1.7E-29 193.5 25.7 238 12-274 30-289 (356)
40 3ly1_A Putative histidinol-pho 99.9 9.1E-26 3.1E-30 197.8 20.8 244 11-271 16-283 (354)
41 2x5d_A Probable aminotransfera 99.9 1E-25 3.6E-30 201.6 21.5 250 12-271 38-318 (412)
42 1gd9_A Aspartate aminotransfer 99.9 1.5E-25 5.1E-30 199.0 22.1 249 12-271 27-308 (389)
43 1lc5_A COBD, L-threonine-O-3-p 99.9 1.6E-25 5.3E-30 197.2 21.6 247 11-275 24-291 (364)
44 3l8a_A METC, putative aminotra 99.9 3.2E-26 1.1E-30 205.6 16.7 256 11-276 61-348 (421)
45 3jtx_A Aminotransferase; NP_28 99.9 1.5E-25 5E-30 199.4 20.7 250 10-271 29-317 (396)
46 3euc_A Histidinol-phosphate am 99.9 8.2E-26 2.8E-30 199.1 18.5 253 7-275 26-300 (367)
47 3dyd_A Tyrosine aminotransfera 99.9 1.5E-25 5.2E-30 201.5 20.5 213 57-275 98-347 (427)
48 1v2d_A Glutamine aminotransfer 99.9 3.8E-25 1.3E-29 195.9 22.4 246 12-271 26-297 (381)
49 2r2n_A Kynurenine/alpha-aminoa 99.9 1.2E-24 4E-29 195.6 25.7 221 47-274 72-344 (425)
50 1c7n_A Cystalysin; transferase 99.9 8.5E-25 2.9E-29 194.7 24.5 254 11-275 31-318 (399)
51 3ht4_A Aluminum resistance pro 99.9 3.1E-25 1.1E-29 199.0 21.7 219 53-272 63-308 (431)
52 1yiz_A Kynurenine aminotransfe 99.9 2.8E-25 9.7E-30 199.8 21.3 252 12-271 38-335 (429)
53 3get_A Histidinol-phosphate am 99.9 4.3E-26 1.5E-30 200.7 15.6 244 11-271 30-297 (365)
54 3h14_A Aminotransferase, class 99.9 7.4E-25 2.5E-29 194.7 23.6 248 11-272 31-303 (391)
55 3p1t_A Putative histidinol-pho 99.9 3.5E-25 1.2E-29 192.7 20.6 244 7-271 12-268 (337)
56 1d2f_A MALY protein; aminotran 99.9 7.8E-25 2.7E-29 194.4 23.1 253 11-275 28-314 (390)
57 3e2y_A Kynurenine-oxoglutarate 99.9 3.5E-25 1.2E-29 197.8 20.7 251 11-271 23-320 (410)
58 3ftb_A Histidinol-phosphate am 99.9 7.5E-25 2.6E-29 192.4 22.1 245 11-275 26-290 (361)
59 2gb3_A Aspartate aminotransfer 99.9 1.3E-24 4.3E-29 194.4 24.0 249 11-271 43-317 (409)
60 1u08_A Hypothetical aminotrans 99.9 2.9E-25 1E-29 196.9 19.6 249 12-271 31-309 (386)
61 2dou_A Probable N-succinyldiam 99.9 6.7E-26 2.3E-30 200.4 15.3 249 11-271 25-303 (376)
62 2o1b_A Aminotransferase, class 99.9 1.4E-25 4.7E-30 200.4 17.2 251 11-271 47-326 (404)
63 2o0r_A RV0858C (N-succinyldiam 99.9 6E-25 2E-29 196.6 21.2 249 12-271 26-306 (411)
64 3ezs_A Aminotransferase ASPB; 99.9 2E-25 6.9E-30 197.2 17.3 246 12-269 24-301 (376)
65 3lvm_A Cysteine desulfurase; s 99.9 1.9E-25 6.5E-30 200.4 16.9 217 56-277 69-309 (423)
66 3fvs_A Kynurenine--oxoglutarat 99.9 1.2E-24 4.1E-29 195.2 21.7 251 12-271 29-327 (422)
67 2dr1_A PH1308 protein, 386AA l 99.9 1.9E-24 6.6E-29 191.3 22.8 212 55-271 53-300 (386)
68 3aow_A Putative uncharacterize 99.9 2.3E-25 8E-30 201.5 16.5 218 48-272 113-365 (448)
69 4eu1_A Mitochondrial aspartate 99.9 6.3E-24 2.2E-28 189.8 24.9 252 11-271 41-344 (409)
70 1xi9_A Putative transaminase; 99.9 1.9E-24 6.6E-29 193.0 20.8 222 48-275 73-327 (406)
71 3ele_A Amino transferase; RER0 99.9 6E-24 2.1E-28 189.2 23.8 253 11-271 35-323 (398)
72 1bw0_A TAT, protein (tyrosine 99.9 3.6E-24 1.2E-28 191.8 21.2 257 11-275 33-336 (416)
73 3nyt_A Aminotransferase WBPE; 99.9 4.8E-24 1.6E-28 187.9 21.6 209 54-271 34-266 (367)
74 1kmj_A Selenocysteine lyase; p 99.9 3.2E-24 1.1E-28 191.0 20.3 216 56-275 68-324 (406)
75 3tcm_A Alanine aminotransferas 99.9 6.9E-24 2.4E-28 194.3 22.7 225 46-275 127-407 (500)
76 1t3i_A Probable cysteine desul 99.9 3.4E-24 1.2E-28 191.8 20.1 217 55-275 72-328 (420)
77 4f4e_A Aromatic-amino-acid ami 99.9 4.6E-24 1.6E-28 191.5 21.0 253 12-271 50-355 (420)
78 2bwn_A 5-aminolevulinate synth 99.9 4.8E-24 1.6E-28 190.0 21.0 251 11-271 46-321 (401)
79 7aat_A Aspartate aminotransfer 99.9 4E-24 1.4E-28 190.6 20.3 254 12-271 29-336 (401)
80 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 5.8E-25 2E-29 193.7 14.8 213 54-275 52-291 (371)
81 3hdo_A Histidinol-phosphate am 99.9 9.4E-25 3.2E-29 191.9 16.1 248 11-271 26-284 (360)
82 3ihj_A Alanine aminotransferas 99.9 9.9E-24 3.4E-28 193.1 23.0 224 47-275 123-406 (498)
83 2oga_A Transaminase; PLP-depen 99.9 9.3E-24 3.2E-28 188.2 22.2 212 55-275 63-298 (399)
84 2x5f_A Aspartate_tyrosine_phen 99.9 7.4E-24 2.5E-28 190.6 21.6 250 11-269 47-352 (430)
85 1elu_A L-cysteine/L-cystine C- 99.9 4.5E-24 1.6E-28 189.2 19.9 218 55-275 59-320 (390)
86 3g0t_A Putative aminotransfera 99.9 1.3E-24 4.5E-29 195.7 16.5 250 11-271 44-354 (437)
87 3zrp_A Serine-pyruvate aminotr 99.9 7.1E-24 2.4E-28 187.4 20.8 212 55-271 35-285 (384)
88 3uwc_A Nucleotide-sugar aminot 99.9 9.6E-24 3.3E-28 186.3 21.6 211 54-273 37-270 (374)
89 2zc0_A Alanine glyoxylate tran 99.9 1.9E-24 6.6E-29 192.9 16.9 211 57-274 81-326 (407)
90 3t18_A Aminotransferase class 99.9 3.1E-24 1.1E-28 192.1 18.2 251 12-271 38-346 (413)
91 3ei9_A LL-diaminopimelate amin 99.9 6E-24 2E-28 191.3 20.0 255 11-271 56-352 (432)
92 1vp4_A Aminotransferase, putat 99.9 1.3E-24 4.4E-29 195.3 15.2 217 48-271 80-334 (425)
93 3piu_A 1-aminocyclopropane-1-c 99.9 1.4E-23 4.7E-28 189.1 22.0 208 57-271 92-348 (435)
94 3nx3_A Acoat, acetylornithine 99.9 2.9E-24 9.9E-29 191.1 17.2 253 11-269 36-317 (395)
95 1iay_A ACC synthase 2, 1-amino 99.9 6.6E-23 2.3E-27 184.3 26.1 218 48-271 78-343 (428)
96 1b9h_A AHBA synthase, protein 99.9 1E-23 3.5E-28 187.1 20.6 211 54-275 37-277 (388)
97 2aeu_A Hypothetical protein MJ 99.9 2.4E-24 8E-29 190.5 16.1 199 57-264 60-269 (374)
98 3cq5_A Histidinol-phosphate am 99.9 2.4E-24 8.2E-29 190.0 16.0 206 57-270 75-300 (369)
99 3rq1_A Aminotransferase class 99.9 9.9E-24 3.4E-28 189.1 19.7 220 47-271 74-348 (418)
100 1vjo_A Alanine--glyoxylate ami 99.9 7.2E-24 2.5E-28 188.3 18.5 210 55-271 67-314 (393)
101 3frk_A QDTB; aminotransferase, 99.9 9.6E-24 3.3E-28 186.4 19.1 210 54-272 35-268 (373)
102 2z9v_A Aspartate aminotransfer 99.9 2E-23 6.9E-28 185.3 20.8 211 56-271 43-289 (392)
103 3cai_A Possible aminotransfera 99.9 1.1E-23 3.8E-28 187.9 19.0 215 55-274 69-325 (406)
104 3fsl_A Aromatic-amino-acid ami 99.9 3.4E-23 1.2E-27 184.2 22.0 256 11-272 26-334 (397)
105 1eg5_A Aminotransferase; PLP-d 99.9 1.9E-23 6.5E-28 184.7 19.8 213 57-274 46-281 (384)
106 3ju7_A Putative PLP-dependent 99.9 2E-23 6.8E-28 184.6 19.4 210 54-274 35-274 (377)
107 2ch1_A 3-hydroxykynurenine tra 99.9 7.5E-24 2.6E-28 188.3 16.5 211 56-271 52-301 (396)
108 3f9t_A TDC, L-tyrosine decarbo 99.9 2.7E-24 9.2E-29 190.8 13.5 211 57-275 71-331 (397)
109 3ruy_A Ornithine aminotransfer 99.9 3.7E-24 1.2E-28 190.2 14.3 252 11-271 36-322 (392)
110 3lws_A Aromatic amino acid bet 99.9 5.3E-24 1.8E-28 186.8 14.7 252 16-276 9-280 (357)
111 3qgu_A LL-diaminopimelate amin 99.9 1.1E-23 3.7E-28 190.6 17.0 252 11-271 69-364 (449)
112 3meb_A Aspartate aminotransfer 99.9 3.8E-23 1.3E-27 187.0 20.1 255 12-271 50-371 (448)
113 2huf_A Alanine glyoxylate amin 99.9 3.2E-23 1.1E-27 184.0 19.3 212 55-271 52-302 (393)
114 4eb5_A Probable cysteine desul 99.9 1.1E-23 3.8E-28 186.2 16.2 216 55-275 43-279 (382)
115 4adb_A Succinylornithine trans 99.9 8.8E-24 3E-28 188.5 15.5 250 11-271 39-322 (406)
116 3fkd_A L-threonine-O-3-phospha 99.9 6.8E-24 2.3E-28 185.7 14.4 244 11-275 15-271 (350)
117 1yaa_A Aspartate aminotransfer 99.9 5.5E-23 1.9E-27 183.9 20.4 220 48-272 68-345 (412)
118 4hvk_A Probable cysteine desul 99.9 1.2E-23 4.2E-28 185.6 15.5 216 55-275 43-279 (382)
119 1iug_A Putative aspartate amin 99.9 7E-23 2.4E-27 179.0 20.1 208 56-271 35-271 (352)
120 3kgw_A Alanine-glyoxylate amin 99.9 2.1E-23 7.3E-28 184.9 16.7 211 56-271 57-306 (393)
121 3isl_A Purine catabolism prote 99.9 7.3E-23 2.5E-27 183.0 20.3 212 55-271 44-309 (416)
122 3dr4_A Putative perosamine syn 99.9 1.7E-22 5.9E-27 179.4 22.4 211 54-275 55-291 (391)
123 3nnk_A Ureidoglycine-glyoxylat 99.9 5.9E-23 2E-27 183.3 19.0 211 56-271 47-309 (411)
124 3ppl_A Aspartate aminotransfer 99.9 8.7E-23 3E-27 183.5 20.0 207 57-270 80-334 (427)
125 2c81_A Glutamine-2-deoxy-scyll 99.9 2.8E-22 9.7E-27 179.6 23.1 213 53-275 39-290 (418)
126 1ajs_A Aspartate aminotransfer 99.9 7E-23 2.4E-27 183.1 19.1 221 47-272 68-345 (412)
127 3vax_A Putative uncharacterize 99.9 5.8E-23 2E-27 182.8 18.0 215 55-275 63-306 (400)
128 2zyj_A Alpha-aminodipate amino 99.9 3.1E-23 1E-27 184.6 16.0 209 57-272 76-313 (397)
129 2eh6_A Acoat, acetylornithine 99.9 2.4E-23 8.2E-28 183.8 15.0 214 54-272 69-310 (375)
130 2q7w_A Aspartate aminotransfer 99.9 6.3E-23 2.2E-27 182.4 17.7 254 11-272 26-333 (396)
131 2fnu_A Aminotransferase; prote 99.9 4.3E-22 1.5E-26 175.6 22.6 212 54-275 31-271 (375)
132 3mad_A Sphingosine-1-phosphate 99.9 3.4E-23 1.2E-27 190.5 16.1 214 57-276 141-401 (514)
133 1mdo_A ARNB aminotransferase; 99.9 2E-22 6.7E-27 179.0 20.4 208 55-272 39-281 (393)
134 3b1d_A Betac-S lyase; HET: PLP 99.8 1.7E-25 6E-30 198.9 0.0 254 11-274 31-317 (392)
135 2yrr_A Aminotransferase, class 99.9 7.6E-23 2.6E-27 178.7 16.7 209 57-271 35-274 (353)
136 2po3_A 4-dehydrase; external a 99.9 5.6E-22 1.9E-26 178.1 22.7 211 55-275 52-284 (424)
137 3f0h_A Aminotransferase; RER07 99.9 1.2E-22 4.1E-27 179.2 18.0 212 55-271 52-297 (376)
138 3k7y_A Aspartate aminotransfer 99.9 8.8E-22 3E-26 175.4 23.4 219 45-269 64-333 (405)
139 3f6t_A Aspartate aminotransfer 99.9 3.3E-22 1.1E-26 184.4 20.8 163 53-220 139-332 (533)
140 1jg8_A L-ALLO-threonine aldola 99.9 9.9E-23 3.4E-27 177.9 15.7 212 54-271 37-272 (347)
141 2bkw_A Alanine-glyoxylate amin 99.9 5.9E-22 2E-26 175.2 20.2 212 57-274 40-303 (385)
142 2ord_A Acoat, acetylornithine 99.9 1.4E-23 4.7E-28 186.9 9.6 247 11-271 40-321 (397)
143 2pb2_A Acetylornithine/succiny 99.9 6E-23 2.1E-27 184.2 13.6 252 11-271 57-340 (420)
144 3asa_A LL-diaminopimelate amin 99.9 4.9E-22 1.7E-26 177.1 19.1 210 57-271 77-315 (400)
145 1vef_A Acetylornithine/acetyl- 99.9 7.2E-23 2.5E-27 182.0 12.9 253 11-272 45-325 (395)
146 2ay1_A Aroat, aromatic amino a 99.9 2.3E-22 7.9E-27 178.7 15.5 252 12-271 27-329 (394)
147 1m32_A 2-aminoethylphosphonate 99.9 5.7E-22 2E-26 174.0 17.5 212 55-271 37-285 (366)
148 3if2_A Aminotransferase; YP_26 99.9 1.4E-21 4.8E-26 176.4 19.9 221 47-270 77-350 (444)
149 3ez1_A Aminotransferase MOCR f 99.9 7.2E-22 2.5E-26 177.2 17.8 207 57-270 72-328 (423)
150 3d6k_A Putative aminotransfera 99.9 1E-21 3.4E-26 176.3 18.6 207 57-270 78-332 (422)
151 3ffr_A Phosphoserine aminotran 99.9 1.3E-21 4.5E-26 171.5 18.9 211 56-276 44-290 (362)
152 2oat_A Ornithine aminotransfer 99.9 4.3E-22 1.5E-26 179.6 16.0 252 11-271 76-363 (439)
153 1o69_A Aminotransferase; struc 99.9 3.9E-21 1.3E-25 171.0 21.9 207 55-271 32-266 (394)
154 1z7d_A Ornithine aminotransfer 99.9 2.3E-22 8E-27 181.0 14.1 251 11-270 65-351 (433)
155 3g7q_A Valine-pyruvate aminotr 99.9 2.2E-21 7.5E-26 173.6 20.2 218 48-270 70-324 (417)
156 2dkj_A Serine hydroxymethyltra 99.9 6E-22 2.1E-26 176.6 16.5 248 11-271 23-300 (407)
157 3bwn_A AT1G70560, L-tryptophan 99.9 4.1E-22 1.4E-26 177.1 14.1 217 47-274 57-304 (391)
158 3b8x_A WBDK, pyridoxamine 5-ph 99.9 5.2E-21 1.8E-25 169.8 21.2 212 54-275 33-293 (390)
159 3mc6_A Sphingosine-1-phosphate 99.9 2.9E-22 9.8E-27 183.6 13.4 215 57-277 109-371 (497)
160 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 5.3E-21 1.8E-25 172.4 21.4 212 55-274 62-330 (437)
161 3n0l_A Serine hydroxymethyltra 99.9 3E-21 1E-25 172.6 19.4 206 59-270 75-300 (417)
162 1uu1_A Histidinol-phosphate am 99.9 7.9E-22 2.7E-26 171.6 14.7 198 57-271 58-272 (335)
163 3e9k_A Kynureninase; kynurenin 99.9 7.5E-22 2.6E-26 179.3 14.7 213 56-271 112-375 (465)
164 3vp6_A Glutamate decarboxylase 99.9 2.8E-21 9.5E-26 177.3 18.6 216 57-278 137-415 (511)
165 3dxv_A Alpha-amino-epsilon-cap 99.9 3.5E-22 1.2E-26 180.1 12.4 252 11-270 43-338 (439)
166 1qz9_A Kynureninase; kynurenin 99.9 2.7E-21 9.2E-26 173.0 17.8 213 55-271 71-324 (416)
167 1v72_A Aldolase; PLP-dependent 99.9 1E-20 3.5E-25 165.5 20.6 213 55-276 43-288 (356)
168 2eo5_A 419AA long hypothetical 99.9 2.1E-21 7.2E-26 174.1 16.5 254 11-271 42-348 (419)
169 3pj0_A LMO0305 protein; struct 99.9 2.1E-21 7.2E-26 170.3 15.9 218 54-276 47-282 (359)
170 1s0a_A Adenosylmethionine-8-am 99.9 2.6E-21 8.9E-26 173.9 15.8 253 11-271 43-350 (429)
171 1c4k_A Protein (ornithine deca 99.9 1.9E-20 6.4E-25 177.1 21.8 214 56-275 174-443 (730)
172 3ke3_A Putative serine-pyruvat 99.9 1.1E-20 3.7E-25 167.2 18.7 210 56-271 36-294 (379)
173 1svv_A Threonine aldolase; str 99.9 5.2E-21 1.8E-25 167.5 16.0 247 12-275 14-290 (359)
174 3a9z_A Selenocysteine lyase; P 99.9 8.4E-21 2.9E-25 170.6 16.3 212 57-272 63-326 (432)
175 3n5m_A Adenosylmethionine-8-am 99.9 5.2E-21 1.8E-25 173.2 15.0 252 11-270 49-360 (452)
176 2dgk_A GAD-beta, GADB, glutama 99.9 9.8E-21 3.4E-25 171.4 16.7 214 57-277 83-352 (452)
177 2cy8_A D-phgat, D-phenylglycin 99.9 2E-21 7E-26 175.9 12.1 249 11-270 57-343 (453)
178 3i4j_A Aminotransferase, class 99.9 3.5E-21 1.2E-25 173.2 13.5 252 11-270 29-335 (430)
179 1wyu_B Glycine dehydrogenase s 99.9 3.3E-21 1.1E-25 175.5 13.4 209 57-271 109-363 (474)
180 2z67_A O-phosphoseryl-tRNA(SEC 99.9 8.4E-21 2.9E-25 171.9 15.5 208 57-272 135-370 (456)
181 2jis_A Cysteine sulfinic acid 99.9 1.7E-20 5.9E-25 172.4 17.5 214 57-276 150-425 (515)
182 3ecd_A Serine hydroxymethyltra 99.9 3.9E-20 1.3E-24 165.7 19.4 209 57-271 79-309 (425)
183 3tfu_A Adenosylmethionine-8-am 99.9 2E-21 6.7E-26 176.1 10.8 255 12-271 76-379 (457)
184 3fq8_A Glutamate-1-semialdehyd 99.8 4E-21 1.4E-25 172.6 12.6 251 11-270 52-339 (427)
185 2zy4_A L-aspartate beta-decarb 99.8 5.1E-20 1.7E-24 170.0 20.3 173 48-223 133-337 (546)
186 3l44_A Glutamate-1-semialdehyd 99.8 2.3E-21 7.9E-26 174.5 10.9 248 11-270 55-342 (434)
187 3hbx_A GAD 1, glutamate decarb 99.8 2E-20 6.9E-25 171.3 17.3 216 57-278 97-368 (502)
188 2a7v_A Serine hydroxymethyltra 99.8 1.6E-20 5.5E-25 170.3 16.1 213 53-271 94-354 (490)
189 4a6r_A Omega transaminase; tra 99.8 8.8E-21 3E-25 172.0 14.2 252 11-268 50-360 (459)
190 1sff_A 4-aminobutyrate aminotr 99.8 8.8E-21 3E-25 170.2 13.8 251 11-270 41-337 (426)
191 2okj_A Glutamate decarboxylase 99.8 3.4E-20 1.2E-24 170.0 17.9 216 57-276 134-410 (504)
192 2ez2_A Beta-tyrosinase, tyrosi 99.8 8E-20 2.7E-24 165.5 20.0 209 54-271 74-332 (456)
193 3i5t_A Aminotransferase; pyrid 99.8 2.8E-20 9.6E-25 169.3 17.0 254 11-271 54-369 (476)
194 3a8u_X Omega-amino acid--pyruv 99.8 3.5E-20 1.2E-24 167.6 17.5 253 11-271 50-368 (449)
195 3h7f_A Serine hydroxymethyltra 99.8 3.8E-20 1.3E-24 167.3 17.5 207 58-271 93-321 (447)
196 2epj_A Glutamate-1-semialdehyd 99.8 3.7E-21 1.3E-25 173.3 10.3 252 11-271 56-344 (434)
197 3dod_A Adenosylmethionine-8-am 99.8 7.5E-21 2.6E-25 171.9 12.4 252 11-270 44-357 (448)
198 3gju_A Putative aminotransfera 99.8 3.2E-20 1.1E-24 168.3 16.2 259 11-275 51-376 (460)
199 2vi8_A Serine hydroxymethyltra 99.8 5.2E-20 1.8E-24 163.9 17.3 205 60-271 74-299 (405)
200 1rv3_A Serine hydroxymethyltra 99.8 6.1E-20 2.1E-24 167.4 17.8 211 57-274 92-346 (483)
201 2x3l_A ORN/Lys/Arg decarboxyla 99.8 4.1E-20 1.4E-24 166.9 16.0 155 55-220 57-229 (446)
202 3k28_A Glutamate-1-semialdehyd 99.8 1.5E-20 5.3E-25 169.0 12.6 247 11-270 53-339 (429)
203 2qma_A Diaminobutyrate-pyruvat 99.8 1.7E-20 5.8E-25 171.8 12.7 216 57-276 142-418 (497)
204 1zod_A DGD, 2,2-dialkylglycine 99.8 5E-20 1.7E-24 165.7 15.4 253 11-270 43-343 (433)
205 2vyc_A Biodegradative arginine 99.8 1.5E-19 5.1E-24 172.2 19.4 210 56-273 206-466 (755)
206 2e7u_A Glutamate-1-semialdehyd 99.8 1.2E-20 4.1E-25 169.4 11.2 251 11-271 52-340 (424)
207 4e77_A Glutamate-1-semialdehyd 99.8 3.4E-20 1.2E-24 166.7 14.1 251 11-270 53-340 (429)
208 3oks_A 4-aminobutyrate transam 99.8 2.9E-20 1E-24 168.2 13.6 254 11-270 61-365 (451)
209 1js3_A DDC;, DOPA decarboxylas 99.8 1.2E-19 4E-24 165.8 17.6 215 57-277 115-401 (486)
210 3n75_A LDC, lysine decarboxyla 99.8 2E-19 7E-24 168.8 18.7 208 56-272 196-443 (715)
211 3gbx_A Serine hydroxymethyltra 99.8 1.4E-19 4.9E-24 161.8 16.7 208 57-270 78-307 (420)
212 3hmu_A Aminotransferase, class 99.8 2.5E-20 8.4E-25 169.5 11.8 253 11-271 55-366 (472)
213 2hox_A ALLIIN lyase 1; cystein 99.8 4.8E-20 1.7E-24 165.5 13.6 205 57-274 106-339 (427)
214 4ffc_A 4-aminobutyrate aminotr 99.8 6.4E-20 2.2E-24 166.0 13.9 260 11-276 64-373 (453)
215 4e1o_A HDC, histidine decarbox 99.8 3.5E-19 1.2E-23 162.4 16.3 215 57-277 120-405 (481)
216 4h51_A Aspartate aminotransfer 99.8 3.8E-18 1.3E-22 152.2 20.9 221 46-271 80-351 (420)
217 3k40_A Aromatic-L-amino-acid d 99.8 4.2E-19 1.4E-23 161.5 14.8 215 57-277 115-398 (475)
218 2yky_A Beta-transaminase; tran 99.7 2.5E-21 8.7E-26 174.6 0.0 250 11-271 100-375 (465)
219 1ax4_A Tryptophanase; tryptoph 99.8 1.3E-18 4.3E-23 158.0 17.0 209 55-270 76-341 (467)
220 2c0r_A PSAT, phosphoserine ami 99.8 2.8E-19 9.5E-24 157.0 10.6 200 57-272 51-283 (362)
221 1w23_A Phosphoserine aminotran 99.8 4.1E-19 1.4E-23 155.6 8.1 202 57-274 50-284 (360)
222 1wyu_A Glycine dehydrogenase ( 99.8 9E-18 3.1E-22 151.3 16.8 209 57-275 110-367 (438)
223 2cjg_A L-lysine-epsilon aminot 99.8 1.6E-18 5.5E-23 156.7 11.7 247 11-270 54-370 (449)
224 2fyf_A PSAT, phosphoserine ami 99.8 9.8E-18 3.4E-22 149.1 14.0 209 56-275 79-321 (398)
225 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 4.3E-17 1.5E-21 144.9 14.0 210 57-272 100-338 (450)
226 2oqx_A Tryptophanase; lyase, p 99.7 1.2E-16 4E-21 145.0 16.2 210 55-271 74-344 (467)
227 1ohv_A 4-aminobutyrate aminotr 99.7 1.3E-17 4.6E-22 151.5 8.3 246 11-270 63-393 (472)
228 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 1.3E-16 4.5E-21 140.3 12.8 201 62-271 124-355 (501)
229 4ao9_A Beta-phenylalanine amin 99.7 8E-17 2.7E-21 144.4 11.0 250 11-270 87-360 (454)
230 3e77_A Phosphoserine aminotran 99.7 6.6E-16 2.3E-20 135.5 14.8 207 57-275 60-296 (377)
231 3ou5_A Serine hydroxymethyltra 99.7 6.2E-15 2.1E-19 129.2 18.4 213 53-271 94-354 (490)
232 3qm2_A Phosphoserine aminotran 99.6 1.2E-15 4.3E-20 134.4 11.6 203 56-271 73-307 (386)
233 4atq_A 4-aminobutyrate transam 99.6 4.2E-15 1.4E-19 133.7 12.8 253 11-269 64-363 (456)
234 3m5u_A Phosphoserine aminotran 99.6 5.3E-14 1.8E-18 122.9 14.4 201 57-274 52-283 (361)
235 4e3q_A Pyruvate transaminase; 99.5 2.3E-13 8E-18 122.8 17.1 265 11-282 67-397 (473)
236 4a0g_A Adenosylmethionine-8-am 99.4 2.1E-14 7.1E-19 137.9 2.5 265 12-280 381-758 (831)
237 3ic5_A Putative saccharopine d 85.7 4.2 0.00014 27.8 7.8 90 72-173 7-97 (118)
238 1iuk_A Hypothetical protein TT 79.5 3.2 0.00011 30.2 5.1 41 132-179 87-127 (140)
239 3llv_A Exopolyphosphatase-rela 78.8 5.3 0.00018 28.6 6.2 89 71-169 7-95 (141)
240 3dhn_A NAD-dependent epimerase 77.6 14 0.00049 28.5 9.0 91 73-170 6-104 (227)
241 3ruf_A WBGU; rossmann fold, UD 77.2 15 0.00052 30.7 9.6 98 72-170 26-143 (351)
242 3e48_A Putative nucleoside-dip 77.0 7.1 0.00024 31.8 7.2 91 74-170 3-98 (289)
243 2jl1_A Triphenylmethane reduct 76.7 9.5 0.00033 30.9 7.9 91 74-170 3-99 (287)
244 1pjq_A CYSG, siroheme synthase 76.1 11 0.00039 33.3 8.7 93 72-178 14-107 (457)
245 2zcu_A Uncharacterized oxidore 75.3 7.7 0.00026 31.4 7.0 91 74-170 2-96 (286)
246 2d59_A Hypothetical protein PH 74.4 12 0.00041 27.2 7.1 43 130-179 92-134 (144)
247 2orv_A Thymidine kinase; TP4A 74.3 5.8 0.0002 31.7 5.6 91 81-178 35-125 (234)
248 1qyd_A Pinoresinol-lariciresin 73.9 22 0.00074 29.1 9.5 99 73-173 6-113 (313)
249 3qvo_A NMRA family protein; st 73.9 17 0.00057 28.5 8.5 91 72-170 24-117 (236)
250 3i6i_A Putative leucoanthocyan 72.7 7.5 0.00026 32.7 6.4 98 73-174 12-116 (346)
251 3dqp_A Oxidoreductase YLBE; al 69.9 35 0.0012 26.1 10.2 89 74-170 3-98 (219)
252 4g81_D Putative hexonate dehyd 69.6 17 0.00059 29.3 7.6 87 67-154 4-101 (255)
253 3ecs_A Translation initiation 68.9 50 0.0017 27.6 11.2 99 71-175 122-229 (315)
254 3qtp_A Enolase 1; glycolysis, 68.6 11 0.00039 33.0 6.6 93 81-175 283-379 (441)
255 3sxp_A ADP-L-glycero-D-mannohe 68.3 34 0.0012 28.7 9.6 102 72-173 11-134 (362)
256 2al1_A Enolase 1, 2-phospho-D- 68.3 11 0.00037 33.3 6.5 92 81-174 277-371 (436)
257 3l77_A Short-chain alcohol deh 67.9 14 0.00048 28.9 6.7 78 73-150 4-91 (235)
258 1y81_A Conserved hypothetical 67.8 18 0.00061 26.0 6.7 41 132-179 86-126 (138)
259 1kyq_A Met8P, siroheme biosynt 67.6 7.7 0.00026 31.8 5.1 33 72-104 15-47 (274)
260 1tks_A 3,4-dihydroxy-2-butanon 66.1 10 0.00035 29.4 5.2 38 137-174 157-194 (204)
261 3m2p_A UDP-N-acetylglucosamine 65.1 28 0.00096 28.5 8.3 88 73-170 4-101 (311)
262 3sho_A Transcriptional regulat 64.7 41 0.0014 25.1 9.1 37 136-176 85-123 (187)
263 1xgk_A Nitrogen metabolite rep 63.9 33 0.0011 28.9 8.6 93 73-169 7-103 (352)
264 3e2i_A Thymidine kinase; Zn-bi 63.8 13 0.00045 29.3 5.5 93 81-177 44-136 (219)
265 4b79_A PA4098, probable short- 63.4 35 0.0012 27.2 8.2 68 72-144 12-83 (242)
266 4iin_A 3-ketoacyl-acyl carrier 62.6 24 0.00082 28.4 7.3 78 72-149 30-117 (271)
267 2r6j_A Eugenol synthase 1; phe 62.4 25 0.00085 28.9 7.5 93 73-171 13-109 (318)
268 3rih_A Short chain dehydrogena 62.3 50 0.0017 27.0 9.2 77 72-148 42-128 (293)
269 3is3_A 17BETA-hydroxysteroid d 62.1 22 0.00077 28.6 7.0 75 72-146 19-103 (270)
270 2duw_A Putative COA-binding pr 61.3 14 0.00047 26.9 5.0 41 132-179 87-127 (145)
271 4dmm_A 3-oxoacyl-[acyl-carrier 61.2 26 0.0009 28.2 7.3 77 72-148 29-115 (269)
272 3fwz_A Inner membrane protein 60.9 13 0.00046 26.5 4.9 73 72-149 9-81 (140)
273 2g1u_A Hypothetical protein TM 60.6 44 0.0015 24.1 9.2 87 71-167 20-107 (155)
274 1xx6_A Thymidine kinase; NESG, 60.5 21 0.00073 27.3 6.2 91 81-175 24-114 (191)
275 3enk_A UDP-glucose 4-epimerase 60.5 19 0.00067 29.8 6.6 98 73-170 7-121 (341)
276 3osu_A 3-oxoacyl-[acyl-carrier 60.5 28 0.00096 27.5 7.2 77 72-148 5-91 (246)
277 4gqr_A Pancreatic alpha-amylas 60.5 5.5 0.00019 35.3 3.2 83 91-178 7-99 (496)
278 2akz_A Gamma enolase, neural; 60.4 16 0.00055 32.2 6.1 92 81-174 274-368 (439)
279 4fc7_A Peroxisomal 2,4-dienoyl 60.3 25 0.00085 28.4 7.0 77 72-148 28-114 (277)
280 3v2g_A 3-oxoacyl-[acyl-carrier 60.3 30 0.001 27.9 7.5 77 72-148 32-118 (271)
281 1hdo_A Biliverdin IX beta redu 60.2 32 0.0011 25.8 7.3 92 73-170 5-103 (206)
282 2q1w_A Putative nucleotide sug 59.5 34 0.0012 28.3 7.9 94 73-170 23-129 (333)
283 1y80_A Predicted cobalamin bin 59.1 35 0.0012 26.4 7.4 67 107-175 105-177 (210)
284 1zk4_A R-specific alcohol dehy 59.0 35 0.0012 26.7 7.6 77 72-148 7-91 (251)
285 3r6d_A NAD-dependent epimerase 58.8 18 0.00062 27.9 5.7 90 73-170 7-100 (221)
286 3ged_A Short-chain dehydrogena 58.8 42 0.0014 26.8 7.9 80 72-155 3-91 (247)
287 2j9r_A Thymidine kinase; TK1, 57.4 20 0.00067 28.2 5.5 93 81-177 44-136 (214)
288 3gk3_A Acetoacetyl-COA reducta 57.3 43 0.0015 26.8 7.9 77 72-148 26-112 (269)
289 3u5t_A 3-oxoacyl-[acyl-carrier 57.3 28 0.00097 28.0 6.8 77 72-148 28-114 (267)
290 4id9_A Short-chain dehydrogena 57.0 46 0.0016 27.6 8.3 86 73-170 21-118 (347)
291 3i4f_A 3-oxoacyl-[acyl-carrier 57.0 33 0.0011 27.3 7.2 76 72-147 8-93 (264)
292 3dr5_A Putative O-methyltransf 56.9 67 0.0023 24.9 11.4 122 54-181 38-168 (221)
293 2z1n_A Dehydrogenase; reductas 56.8 43 0.0015 26.6 7.8 76 72-148 8-94 (260)
294 1xg5_A ARPG836; short chain de 56.5 43 0.0015 26.9 7.8 76 72-148 33-120 (279)
295 3oid_A Enoyl-[acyl-carrier-pro 55.4 45 0.0015 26.5 7.7 76 72-148 5-91 (258)
296 3rwb_A TPLDH, pyridoxal 4-dehy 54.8 45 0.0015 26.3 7.5 76 72-151 7-92 (247)
297 3ijr_A Oxidoreductase, short c 54.7 17 0.00058 29.8 5.1 75 72-146 48-132 (291)
298 2ioj_A Hypothetical protein AF 53.9 45 0.0015 23.7 6.7 44 126-175 60-104 (139)
299 1vb5_A Translation initiation 53.8 89 0.003 25.4 10.2 103 66-174 105-216 (276)
300 3ksu_A 3-oxoacyl-acyl carrier 53.8 64 0.0022 25.7 8.4 77 72-148 12-100 (262)
301 3slg_A PBGP3 protein; structur 53.7 18 0.0006 30.6 5.2 96 73-173 26-137 (372)
302 1qyc_A Phenylcoumaran benzylic 53.4 22 0.00074 29.0 5.6 93 74-171 7-107 (308)
303 3tqp_A Enolase; energy metabol 53.3 18 0.00061 31.8 5.1 94 81-176 267-365 (428)
304 3tla_A MCCF; serine protease, 53.2 54 0.0018 28.1 8.0 67 89-155 39-125 (371)
305 2x4g_A Nucleoside-diphosphate- 53.2 57 0.002 26.8 8.3 92 73-170 15-118 (342)
306 4egb_A DTDP-glucose 4,6-dehydr 53.0 19 0.00063 30.1 5.2 98 73-170 26-141 (346)
307 2q1s_A Putative nucleotide sug 52.9 43 0.0015 28.3 7.5 94 73-170 34-143 (377)
308 3otr_A Enolase; structural gen 52.8 15 0.0005 32.4 4.4 94 81-176 285-383 (452)
309 4fgs_A Probable dehydrogenase 52.6 50 0.0017 26.9 7.5 80 72-155 30-119 (273)
310 3m1a_A Putative dehydrogenase; 52.4 86 0.0029 25.0 9.1 75 72-148 6-88 (281)
311 1g94_A Alpha-amylase; beta-alp 52.4 8.6 0.0003 33.9 3.0 31 148-178 57-87 (448)
312 2fym_A Enolase; RNA degradosom 52.4 28 0.00097 30.5 6.4 95 81-177 271-370 (431)
313 3gvc_A Oxidoreductase, probabl 52.4 54 0.0019 26.4 7.8 75 72-148 30-112 (277)
314 2yxb_A Coenzyme B12-dependent 52.3 34 0.0012 25.3 6.0 60 107-168 35-96 (161)
315 3uj2_A Enolase 1; enzyme funct 52.3 18 0.00063 31.9 5.1 94 81-176 293-391 (449)
316 4e3z_A Putative oxidoreductase 51.7 63 0.0021 25.8 8.1 75 72-147 27-112 (272)
317 4h1h_A LMO1638 protein; MCCF-l 51.7 32 0.0011 28.9 6.3 67 89-155 8-94 (327)
318 1gy8_A UDP-galactose 4-epimera 51.6 52 0.0018 27.8 7.9 98 73-170 4-136 (397)
319 3dm5_A SRP54, signal recogniti 51.5 97 0.0033 27.2 9.5 123 57-179 76-225 (443)
320 3c1o_A Eugenol synthase; pheny 50.8 46 0.0016 27.2 7.2 96 74-174 7-110 (321)
321 3v2h_A D-beta-hydroxybutyrate 50.8 62 0.0021 26.1 7.9 78 72-149 26-114 (281)
322 3sju_A Keto reductase; short-c 50.5 66 0.0023 25.9 8.0 77 72-149 25-111 (279)
323 3a11_A Translation initiation 50.5 58 0.002 27.5 7.7 99 72-176 143-250 (338)
324 1uls_A Putative 3-oxoacyl-acyl 50.5 38 0.0013 26.7 6.4 72 72-147 6-85 (245)
325 3pk0_A Short-chain dehydrogena 50.5 60 0.0021 25.8 7.7 77 72-148 11-97 (262)
326 3ghf_A Septum site-determining 50.3 55 0.0019 22.8 6.4 54 116-173 14-78 (120)
327 2gas_A Isoflavone reductase; N 50.2 37 0.0013 27.6 6.5 95 74-173 5-108 (307)
328 3l6e_A Oxidoreductase, short-c 50.2 52 0.0018 25.7 7.2 75 73-149 5-87 (235)
329 3ezl_A Acetoacetyl-COA reducta 50.2 41 0.0014 26.6 6.6 76 71-147 13-99 (256)
330 1lss_A TRK system potassium up 50.1 40 0.0014 23.4 6.0 89 72-169 6-94 (140)
331 3h7a_A Short chain dehydrogena 50.0 74 0.0025 25.1 8.2 76 72-148 8-92 (252)
332 4egf_A L-xylulose reductase; s 50.0 33 0.0011 27.5 6.0 77 72-148 21-107 (266)
333 1sb8_A WBPP; epimerase, 4-epim 49.9 55 0.0019 27.2 7.7 97 73-170 29-145 (352)
334 2yva_A DNAA initiator-associat 49.8 79 0.0027 23.7 11.9 37 133-173 104-140 (196)
335 4iiu_A 3-oxoacyl-[acyl-carrier 49.6 61 0.0021 25.8 7.6 77 72-148 27-113 (267)
336 3r1i_A Short-chain type dehydr 49.3 89 0.003 25.1 8.6 76 72-148 33-118 (276)
337 3pgx_A Carveol dehydrogenase; 49.2 53 0.0018 26.4 7.2 78 72-149 16-115 (280)
338 3guy_A Short-chain dehydrogena 49.0 57 0.002 25.2 7.2 71 73-147 3-80 (230)
339 2ptz_A Enolase; lyase, glycoly 49.0 28 0.00096 30.5 5.7 89 86-176 281-374 (432)
340 3kts_A Glycerol uptake operon 49.0 30 0.001 26.6 5.2 49 127-180 17-67 (192)
341 3l4b_C TRKA K+ channel protien 48.9 40 0.0014 26.0 6.2 73 73-149 3-75 (218)
342 3imf_A Short chain dehydrogena 48.9 69 0.0024 25.3 7.8 75 72-147 7-91 (257)
343 3tfo_A Putative 3-oxoacyl-(acy 48.8 62 0.0021 25.9 7.5 78 72-150 5-92 (264)
344 2pzm_A Putative nucleotide sug 48.7 66 0.0022 26.5 7.9 94 73-170 22-128 (330)
345 3c85_A Putative glutathione-re 48.6 52 0.0018 24.4 6.7 88 72-169 41-130 (183)
346 1chr_A Chloromuconate cycloiso 48.5 1.2E+02 0.0043 25.6 10.0 82 94-177 215-298 (370)
347 3gem_A Short chain dehydrogena 48.3 23 0.0008 28.3 4.8 72 72-147 28-107 (260)
348 3jva_A Dipeptide epimerase; en 48.2 80 0.0027 26.6 8.4 86 91-178 207-294 (354)
349 3rft_A Uronate dehydrogenase; 48.1 71 0.0024 25.3 7.8 89 73-170 5-103 (267)
350 3p19_A BFPVVD8, putative blue 48.0 55 0.0019 26.2 7.1 72 72-148 17-96 (266)
351 3pxx_A Carveol dehydrogenase; 47.9 54 0.0018 26.3 7.1 77 72-148 11-108 (287)
352 4e6p_A Probable sorbitol dehyd 47.9 73 0.0025 25.2 7.8 76 72-149 9-92 (259)
353 3edm_A Short chain dehydrogena 47.8 67 0.0023 25.5 7.6 74 72-146 9-93 (259)
354 3bh4_A Alpha-amylase; calcium, 47.7 13 0.00044 33.1 3.5 30 149-178 72-101 (483)
355 2ehd_A Oxidoreductase, oxidore 47.7 93 0.0032 23.9 8.4 72 72-147 6-86 (234)
356 3bzy_B ESCU; auto cleavage pro 47.6 12 0.00042 24.4 2.4 21 158-178 29-49 (83)
357 1vhx_A Putative holliday junct 47.6 46 0.0016 24.3 5.9 53 128-180 43-102 (150)
358 2hmt_A YUAA protein; RCK, KTN, 47.6 67 0.0023 22.2 7.4 90 71-169 7-96 (144)
359 2poz_A Putative dehydratase; o 47.6 67 0.0023 27.5 7.9 111 62-175 190-307 (392)
360 3mwd_B ATP-citrate synthase; A 47.5 31 0.0011 29.1 5.5 75 101-179 65-141 (334)
361 2c20_A UDP-glucose 4-epimerase 47.5 44 0.0015 27.4 6.6 92 74-170 4-110 (330)
362 4e5s_A MCCFLIKE protein (BA_56 47.4 56 0.0019 27.5 7.1 67 89-155 8-94 (331)
363 3ezx_A MMCP 1, monomethylamine 47.3 40 0.0014 26.3 5.9 74 94-169 93-173 (215)
364 2c5a_A GDP-mannose-3', 5'-epim 47.2 66 0.0023 27.1 7.8 92 73-170 31-137 (379)
365 3ko8_A NAD-dependent epimerase 47.1 84 0.0029 25.4 8.3 89 74-170 3-105 (312)
366 2wm3_A NMRA-like family domain 46.8 29 0.00098 28.2 5.3 98 72-174 6-112 (299)
367 3o38_A Short chain dehydrogena 46.6 54 0.0018 26.0 6.8 78 72-149 23-111 (266)
368 3u9l_A 3-oxoacyl-[acyl-carrier 46.6 56 0.0019 27.2 7.1 77 72-148 6-96 (324)
369 4ibo_A Gluconate dehydrogenase 46.5 63 0.0022 25.9 7.3 76 72-148 27-112 (271)
370 3mio_A DHBP synthase, 3,4-dihy 46.5 42 0.0014 26.0 5.7 37 138-174 157-194 (206)
371 3tpc_A Short chain alcohol deh 46.3 57 0.002 25.7 6.9 72 72-147 8-89 (257)
372 3sr3_A Microcin immunity prote 46.2 64 0.0022 27.1 7.4 67 89-155 9-95 (336)
373 1ud2_A Amylase, alpha-amylase; 46.2 14 0.00047 32.9 3.4 29 150-178 75-103 (480)
374 2uvd_A 3-oxoacyl-(acyl-carrier 46.2 82 0.0028 24.6 7.8 77 72-148 5-91 (246)
375 1hvx_A Alpha-amylase; hydrolas 46.0 14 0.00047 33.3 3.4 30 149-178 75-104 (515)
376 3o63_A Probable thiamine-phosp 46.0 23 0.00079 28.3 4.4 49 129-177 46-104 (243)
377 1wpc_A Glucan 1,4-alpha-maltoh 45.9 14 0.00048 32.9 3.4 30 149-178 76-105 (485)
378 3gdg_A Probable NADP-dependent 45.9 49 0.0017 26.2 6.5 77 72-148 21-110 (267)
379 2b4q_A Rhamnolipids biosynthes 45.9 33 0.0011 27.7 5.4 75 72-147 30-113 (276)
380 1iv0_A Hypothetical protein; r 45.8 39 0.0013 22.7 4.8 52 128-179 39-96 (98)
381 3nyw_A Putative oxidoreductase 45.7 29 0.00098 27.6 5.0 77 72-148 8-96 (250)
382 1mxg_A Alpha amylase; hyperthe 45.7 14 0.00049 32.3 3.4 30 149-178 80-109 (435)
383 3tzq_B Short-chain type dehydr 45.7 50 0.0017 26.5 6.5 74 72-147 12-93 (271)
384 3qn3_A Enolase; structural gen 45.5 22 0.00074 31.1 4.4 95 81-177 265-364 (417)
385 3ak4_A NADH-dependent quinucli 45.4 72 0.0025 25.2 7.4 74 72-147 13-94 (263)
386 2gl5_A Putative dehydratase pr 44.9 60 0.0021 28.0 7.3 111 62-175 209-326 (410)
387 1yb1_A 17-beta-hydroxysteroid 44.9 1E+02 0.0036 24.4 8.4 76 72-148 32-117 (272)
388 3qlj_A Short chain dehydrogena 44.9 1E+02 0.0035 25.3 8.5 75 72-147 28-122 (322)
389 3rkr_A Short chain oxidoreduct 44.7 58 0.002 25.8 6.8 76 72-148 30-115 (262)
390 3uf0_A Short-chain dehydrogena 44.6 1.2E+02 0.0041 24.2 8.7 75 72-148 32-115 (273)
391 3lyl_A 3-oxoacyl-(acyl-carrier 44.4 61 0.0021 25.3 6.8 76 72-148 6-91 (247)
392 3dii_A Short-chain dehydrogena 44.3 66 0.0023 25.3 7.0 74 72-149 3-85 (247)
393 1gcy_A Glucan 1,4-alpha-maltot 44.1 16 0.00054 33.0 3.5 29 150-178 87-115 (527)
394 3tsc_A Putative oxidoreductase 44.1 62 0.0021 25.9 6.9 77 72-148 12-110 (277)
395 2bgk_A Rhizome secoisolaricire 43.9 29 0.00098 27.8 4.8 75 72-146 17-99 (278)
396 3f9i_A 3-oxoacyl-[acyl-carrier 43.8 45 0.0015 26.2 5.9 74 72-147 15-92 (249)
397 1xrs_B D-lysine 5,6-aminomutas 43.8 1.3E+02 0.0044 24.3 9.2 64 114-177 152-223 (262)
398 1lwj_A 4-alpha-glucanotransfer 43.7 13 0.00045 32.6 2.8 28 151-178 65-92 (441)
399 4da9_A Short-chain dehydrogena 43.4 27 0.00092 28.3 4.5 76 72-147 30-115 (280)
400 2pa6_A Enolase; glycolysis, ly 43.4 23 0.0008 31.0 4.3 92 81-174 271-365 (427)
401 3lf2_A Short chain oxidoreduct 43.4 76 0.0026 25.2 7.3 78 72-149 9-97 (265)
402 4dqx_A Probable oxidoreductase 43.4 1E+02 0.0035 24.7 8.1 74 72-149 28-111 (277)
403 2b8t_A Thymidine kinase; deoxy 43.3 18 0.00063 28.5 3.3 92 81-177 28-124 (223)
404 2o23_A HADH2 protein; HSD17B10 43.2 80 0.0027 24.8 7.4 74 72-147 13-94 (265)
405 3nl6_A Thiamine biosynthetic b 43.0 24 0.00081 32.0 4.4 49 129-177 28-77 (540)
406 1spx_A Short-chain reductase f 43.0 77 0.0026 25.3 7.3 75 72-146 7-93 (278)
407 3m9w_A D-xylose-binding peripl 42.8 44 0.0015 27.1 5.9 69 101-174 15-88 (313)
408 3ppi_A 3-hydroxyacyl-COA dehyd 42.8 78 0.0027 25.3 7.3 71 72-146 31-110 (281)
409 1wza_A Alpha-amylase A; hydrol 42.7 15 0.00052 32.6 3.1 27 152-178 78-104 (488)
410 3dip_A Enolase; structural gen 42.6 93 0.0032 26.9 8.0 113 62-177 204-324 (410)
411 3grp_A 3-oxoacyl-(acyl carrier 42.5 53 0.0018 26.3 6.2 73 72-148 28-110 (266)
412 3tjr_A Short chain dehydrogena 42.5 86 0.003 25.5 7.6 76 72-148 32-117 (301)
413 1x1t_A D(-)-3-hydroxybutyrate 42.4 82 0.0028 24.9 7.3 76 72-147 5-91 (260)
414 3efb_A Probable SOR-operon reg 42.3 44 0.0015 27.0 5.6 22 57-78 13-34 (266)
415 3dfz_A SIRC, precorrin-2 dehyd 42.2 71 0.0024 25.1 6.6 88 71-173 32-119 (223)
416 3ioy_A Short-chain dehydrogena 42.2 56 0.0019 27.0 6.4 77 72-148 9-96 (319)
417 3tj4_A Mandelate racemase; eno 42.1 1.2E+02 0.004 25.8 8.5 83 90-174 220-304 (372)
418 3q45_A Mandelate racemase/muco 41.8 69 0.0023 27.2 7.0 48 128-177 246-294 (368)
419 3svt_A Short-chain type dehydr 41.8 88 0.003 25.1 7.5 75 72-147 12-99 (281)
420 1g57_A DHBP synthase, 3,4-dihy 41.7 56 0.0019 25.6 5.7 36 138-174 166-201 (217)
421 1w6t_A Enolase; bacterial infe 41.7 24 0.00082 31.1 4.1 94 81-176 283-381 (444)
422 4aie_A Glucan 1,6-alpha-glucos 41.7 14 0.00049 33.2 2.8 27 152-178 76-102 (549)
423 2dh2_A 4F2 cell-surface antige 41.5 17 0.00057 31.8 3.1 31 149-179 75-105 (424)
424 1ht6_A AMY1, alpha-amylase iso 41.4 16 0.00054 31.7 2.9 29 151-179 64-92 (405)
425 1jae_A Alpha-amylase; glycosid 41.4 13 0.00044 33.0 2.4 83 93-178 9-97 (471)
426 1hxh_A 3BETA/17BETA-hydroxyste 41.4 1.2E+02 0.0043 23.7 8.2 75 72-148 7-89 (253)
427 1g0o_A Trihydroxynaphthalene r 41.2 96 0.0033 24.9 7.6 76 72-147 30-115 (283)
428 1ff9_A Saccharopine reductase; 41.2 89 0.0031 27.4 7.8 97 72-173 5-120 (450)
429 3op4_A 3-oxoacyl-[acyl-carrier 41.0 1.1E+02 0.0037 24.0 7.8 75 72-148 10-92 (248)
430 2vt1_B Surface presentation of 40.8 18 0.00061 24.2 2.4 21 158-178 29-49 (93)
431 4fn4_A Short chain dehydrogena 40.7 27 0.00091 28.1 4.0 74 72-146 8-91 (254)
432 2guy_A Alpha-amylase A; (beta- 40.7 16 0.00053 32.5 2.8 29 150-178 92-120 (478)
433 3i4k_A Muconate lactonizing en 40.7 96 0.0033 26.5 7.8 48 128-177 256-304 (383)
434 3s55_A Putative short-chain de 40.6 94 0.0032 24.8 7.5 77 72-148 11-108 (281)
435 1ek6_A UDP-galactose 4-epimera 40.5 49 0.0017 27.4 5.9 97 73-170 4-124 (348)
436 1sjd_A N-acylamino acid racema 40.5 57 0.002 27.6 6.3 48 128-177 244-292 (368)
437 3dhu_A Alpha-amylase; structur 40.4 17 0.00059 31.9 3.1 28 151-178 79-106 (449)
438 2rdx_A Mandelate racemase/muco 40.1 1.7E+02 0.0059 24.8 9.6 110 62-177 180-296 (379)
439 2p5y_A UDP-glucose 4-epimerase 39.9 1.1E+02 0.0036 24.8 7.8 92 74-170 3-109 (311)
440 4hp8_A 2-deoxy-D-gluconate 3-d 39.9 67 0.0023 25.7 6.2 75 67-144 4-84 (247)
441 3gi1_A LBP, laminin-binding pr 39.8 62 0.0021 26.5 6.2 68 92-173 178-255 (286)
442 1rpn_A GDP-mannose 4,6-dehydra 39.8 79 0.0027 25.9 7.1 99 72-170 15-129 (335)
443 1cyd_A Carbonyl reductase; sho 39.7 96 0.0033 24.0 7.3 73 72-148 8-85 (244)
444 2e8y_A AMYX protein, pullulana 39.6 12 0.00042 35.3 2.0 26 154-179 314-339 (718)
445 2c07_A 3-oxoacyl-(acyl-carrier 39.6 1.4E+02 0.0049 23.8 9.9 76 72-148 45-130 (285)
446 3r3s_A Oxidoreductase; structu 39.5 39 0.0013 27.6 4.9 76 72-147 50-136 (294)
447 8abp_A L-arabinose-binding pro 39.5 36 0.0012 27.5 4.8 64 107-175 21-89 (306)
448 1h5q_A NADP-dependent mannitol 39.4 77 0.0026 24.9 6.7 76 72-147 15-100 (265)
449 3sc4_A Short chain dehydrogena 39.3 1.1E+02 0.0036 24.7 7.6 78 72-150 10-104 (285)
450 1r6d_A TDP-glucose-4,6-dehydra 39.2 1.1E+02 0.0037 25.1 7.8 96 74-170 3-119 (337)
451 4eso_A Putative oxidoreductase 39.2 94 0.0032 24.5 7.1 72 72-147 9-90 (255)
452 1yxm_A Pecra, peroxisomal tran 39.2 47 0.0016 27.0 5.5 77 72-148 19-109 (303)
453 3afn_B Carbonyl reductase; alp 39.2 55 0.0019 25.6 5.7 76 72-148 8-94 (258)
454 2cfc_A 2-(R)-hydroxypropyl-COM 39.1 41 0.0014 26.3 4.9 75 73-147 4-88 (250)
455 3t7y_A YOP proteins translocat 39.1 17 0.00057 24.5 2.1 21 158-178 44-64 (97)
456 3sc6_A DTDP-4-dehydrorhamnose 39.0 43 0.0015 26.8 5.2 81 73-173 7-102 (287)
457 2z1k_A (NEO)pullulanase; hydro 39.0 17 0.00057 32.3 2.7 29 150-178 91-119 (475)
458 3awd_A GOX2181, putative polyo 39.0 86 0.0029 24.5 6.9 75 72-147 14-98 (260)
459 2ya0_A Putative alkaline amylo 39.0 16 0.00056 34.4 2.8 29 151-179 250-278 (714)
460 1pq4_A Periplasmic binding pro 38.9 1E+02 0.0035 25.2 7.4 68 92-173 189-264 (291)
461 2hq1_A Glucose/ribitol dehydro 38.6 38 0.0013 26.5 4.6 74 72-146 6-90 (247)
462 1vl8_A Gluconate 5-dehydrogena 38.5 74 0.0025 25.4 6.4 76 72-147 22-107 (267)
463 2oz8_A MLL7089 protein; struct 38.4 1.1E+02 0.0039 26.0 7.9 108 62-175 181-296 (389)
464 3rd5_A Mypaa.01249.C; ssgcid, 38.4 35 0.0012 27.7 4.5 71 72-146 17-93 (291)
465 2wc7_A Alpha amylase, catalyti 38.3 16 0.00054 32.5 2.5 29 150-178 97-125 (488)
466 2gdq_A YITF; mandelate racemas 38.2 1.2E+02 0.0042 25.8 8.1 112 61-175 174-293 (382)
467 2bka_A CC3, TAT-interacting pr 38.1 36 0.0012 26.5 4.4 93 72-170 19-124 (242)
468 2aaa_A Alpha-amylase; glycosid 37.9 16 0.00056 32.4 2.5 30 149-178 91-120 (484)
469 2pnf_A 3-oxoacyl-[acyl-carrier 37.8 65 0.0022 25.0 5.9 77 72-148 8-94 (248)
470 3nzo_A UDP-N-acetylglucosamine 37.8 1.2E+02 0.004 26.0 7.9 98 73-170 37-157 (399)
471 3icc_A Putative 3-oxoacyl-(acy 37.7 1.1E+02 0.0038 23.8 7.3 64 72-136 8-76 (255)
472 1snn_A DHBP synthase, 3,4-dihy 37.7 48 0.0016 26.2 4.8 36 138-174 177-212 (227)
473 1edo_A Beta-keto acyl carrier 37.6 44 0.0015 26.0 4.9 75 73-148 3-88 (244)
474 3tox_A Short chain dehydrogena 37.6 1.5E+02 0.0052 23.7 8.3 74 72-146 9-92 (280)
475 3kv1_A Transcriptional repress 37.5 63 0.0021 26.1 5.8 21 58-78 10-30 (267)
476 3t4x_A Oxidoreductase, short c 37.5 1.1E+02 0.0036 24.4 7.2 77 72-148 11-94 (267)
477 3e03_A Short chain dehydrogena 37.4 1.2E+02 0.004 24.2 7.5 76 72-148 7-99 (274)
478 3c01_E Surface presentation of 37.3 19 0.00063 24.4 2.1 21 158-178 29-49 (98)
479 3un1_A Probable oxidoreductase 37.3 1E+02 0.0035 24.4 7.1 69 72-148 29-105 (260)
480 3ff4_A Uncharacterized protein 37.2 35 0.0012 24.0 3.7 40 130-177 73-112 (122)
481 2pju_A Propionate catabolism o 36.9 54 0.0018 25.8 5.1 74 96-177 85-162 (225)
482 3jy6_A Transcriptional regulat 36.9 47 0.0016 26.4 5.0 56 110-173 29-89 (276)
483 2o1e_A YCDH; alpha-beta protei 36.7 74 0.0025 26.4 6.2 68 92-173 189-266 (312)
484 1jeo_A MJ1247, hypothetical pr 36.7 1.2E+02 0.0042 22.2 8.4 86 58-176 28-118 (180)
485 3oec_A Carveol dehydrogenase ( 36.7 1.1E+02 0.0036 25.2 7.3 77 72-148 47-144 (317)
486 3ftp_A 3-oxoacyl-[acyl-carrier 36.5 1.1E+02 0.0038 24.4 7.2 76 72-148 29-114 (270)
487 3kvo_A Hydroxysteroid dehydrog 36.5 1.7E+02 0.0058 24.5 8.6 76 72-148 46-138 (346)
488 3kjx_A Transcriptional regulat 36.5 90 0.0031 25.7 6.9 65 102-173 82-151 (344)
489 3bjs_A Mandelate racemase/muco 36.4 1.1E+02 0.0038 26.6 7.6 78 97-175 259-338 (428)
490 1ja9_A 4HNR, 1,3,6,8-tetrahydr 36.2 77 0.0026 25.0 6.2 75 72-146 22-106 (274)
491 3tha_A Tryptophan synthase alp 36.1 66 0.0022 25.9 5.5 80 94-174 118-204 (252)
492 2ae2_A Protein (tropinone redu 35.7 1E+02 0.0035 24.2 6.9 75 72-147 10-95 (260)
493 2q2v_A Beta-D-hydroxybutyrate 35.7 1.4E+02 0.0047 23.4 7.6 73 72-147 5-87 (255)
494 3uug_A Multiple sugar-binding 35.5 40 0.0014 27.6 4.5 66 104-174 19-89 (330)
495 1nff_A Putative oxidoreductase 35.5 1.2E+02 0.004 24.0 7.2 75 72-148 8-90 (260)
496 2i2x_B MTAC, methyltransferase 35.5 76 0.0026 25.4 6.0 75 93-169 123-202 (258)
497 3ddm_A Putative mandelate race 35.4 1.1E+02 0.0037 26.3 7.3 111 62-174 190-307 (392)
498 3r0u_A Enzyme of enolase super 35.3 1.4E+02 0.0048 25.5 7.9 48 128-177 250-298 (379)
499 3e8x_A Putative NAD-dependent 35.2 79 0.0027 24.4 6.0 90 73-170 23-123 (236)
500 1m53_A Isomaltulose synthase; 35.2 20 0.0007 32.6 2.7 27 152-178 89-115 (570)
No 1
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-41 Score=302.70 Aligned_cols=295 Identities=33% Similarity=0.513 Sum_probs=258.9
Q ss_pred CCCccceeeecCCCCCCCCccccCeeecceeecCCC--------CCCCCccccCCCCchHHHHHHHHHhhcCCCceEEec
Q 022194 6 EPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (301)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~ 77 (301)
+.+++|..++.+...+..|...+|++.+.++..+.. .....+.|+++++|.++++++++++++|.+++++++
T Consensus 24 ~~~~~t~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~~~ 103 (414)
T 3ndn_A 24 GVSQATVGVRGGMLRSGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFATA 103 (414)
T ss_dssp TCCHHHHHHHTTCCCCTTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCccceeeecCCCCCCCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEEEC
Confidence 345567778777555668999999999999887654 334568899999999999999999999999999999
Q ss_pred chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 78 sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
||++|+. ++..++++||+|+++++.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||+|.+.
T Consensus 104 sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~~~ 183 (414)
T 3ndn_A 104 SGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLV 183 (414)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCccc
Confidence 9999986 677789999999999999999987666666779999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCC
Q 022194 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
++++|+++|+++|+++|+|++|+.+....+...|+|+++.|+||++++++.+++|+++++++.+.+.+.......+..++
T Consensus 184 ~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~ 263 (414)
T 3ndn_A 184 DIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMS 263 (414)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCC
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999887777778899999999999996544478999999876555455555566677889
Q ss_pred HHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+..++.++.+++.+..+.+++.++++++.++|+++|.+..+.+|++++.|+|.+++++.++.||
T Consensus 264 ~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~ 327 (414)
T 3ndn_A 264 AFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGT 327 (414)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCce
Confidence 9999999999999999999999999999999999999999999999999999999999987765
No 2
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=3.3e-41 Score=300.58 Aligned_cols=293 Identities=43% Similarity=0.699 Sum_probs=262.4
Q ss_pred CccceeeecCCCCC-CCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHH
Q 022194 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (301)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~ 86 (301)
+++|..++.+...+ ..|...+|++.+.+|..+.......+.|+++++|.++++++.++++.+.+++++++||++|+.++
T Consensus 19 ~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~~ 98 (400)
T 3nmy_A 19 SLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGTRAFAFASGMAATSTV 98 (400)
T ss_dssp CHHHHHHHTTCCCCTTTCBSSCCBCCCSBBBCSBTTBSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CcchheeeCCCCCCCCCCCcCCCccccceeeccCccccCCcccccCCCHHHHHHHHHHHHHhCCCCEEEecCHHHHHHHH
Confidence 45677777764444 48999999999999988766666778899999999999999999999999999999999999778
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhh-cccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~-~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~ 165 (301)
+.++++||+|+++++.|++....+... ++..|++++.++.+|++++++++++++++|++++|+||+|.+.|+++|+++|
T Consensus 99 ~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la 178 (400)
T 3nmy_A 99 MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIA 178 (400)
T ss_dssp HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHH
Confidence 889999999999999999887666555 6677999999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceee-EEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHH
Q 022194 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAG-VLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (301)
Q Consensus 166 ~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
+++|+++|+|++|+.+....+...++|+++.|++|+++|++..++| +++.+++.+.+.+.......+..+++..++.++
T Consensus 179 ~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l 258 (400)
T 3nmy_A 179 RKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLAL 258 (400)
T ss_dssp HHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHH
T ss_pred HHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 9999999999999987777788889999999999999887666678 777777788888877777888889999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 245 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
++++.+..+.++..++++.+.++|+++|.+..+.+|+++++|.|.+++++.++.|+
T Consensus 259 ~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~ 314 (400)
T 3nmy_A 259 RGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGG 314 (400)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS
T ss_pred HhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999999999999999977765
No 3
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=2.1e-40 Score=297.42 Aligned_cols=294 Identities=34% Similarity=0.481 Sum_probs=227.0
Q ss_pred CCCccceeeecCCCCC-CCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 022194 6 EPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (301)
Q Consensus 6 ~~~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~ 76 (301)
+..++|..++.+...+ ..|...+|++.+.+|..+... ....+.|+++++|.++++++++++++|.+.++++
T Consensus 24 m~~~~t~~~h~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~ 103 (430)
T 3ri6_A 24 MRGFTTRALHVPKAKRDVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVLAL 103 (430)
T ss_dssp -CCHHHHHHCCC--------------------------------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCCcchhheeCCCCCCCCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 4456677787763333 489999999999998775432 2246788999999999999999999999999999
Q ss_pred cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccc
Q 022194 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 77 ~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~ 155 (301)
+||++|+. ++.+++++||+|+++++.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||+|.+
T Consensus 104 ~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~ 183 (430)
T 3ri6_A 104 GSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQV 183 (430)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCee
Confidence 99999985 66778999999999999999998776667788999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchh-H--------------
Q 022194 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-L-------------- 220 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~-~-------------- 220 (301)
.|+++|+++|+++|+++|+|++|+.+....+...|+|+++.|++|+++|++..++|+++.+.+. +
T Consensus 184 ~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g 263 (430)
T 3ri6_A 184 ADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG 263 (430)
T ss_dssp CCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc
Confidence 9999999999999999999999999888888888999999999999987765667888854321 1
Q ss_pred ----HHHH-HHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhh
Q 022194 221 ----AKEL-YFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQV 295 (301)
Q Consensus 221 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~ 295 (301)
.... .......+..+++..++.++++++.+..+.++..++++.+.++|+++|.|..|.+|+++++|+|.+++++.
T Consensus 264 ~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~ 343 (430)
T 3ri6_A 264 PMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF 343 (430)
T ss_dssp GGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC
T ss_pred hhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC
Confidence 1221 12334567778999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC
Q 022194 296 LSDNG 300 (301)
Q Consensus 296 ~~~~~ 300 (301)
+.||
T Consensus 344 -g~Gg 347 (430)
T 3ri6_A 344 -RYAG 347 (430)
T ss_dssp -SSCC
T ss_pred -CCCc
Confidence 6666
No 4
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=2.4e-39 Score=288.30 Aligned_cols=293 Identities=44% Similarity=0.737 Sum_probs=259.2
Q ss_pred CccceeeecCCCCC-CCCccccCeeecceeecCCCCCC-CCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-
Q 022194 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATEN-GPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (301)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~~~-~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~- 84 (301)
+++|..++.+...+ ..|...+|++.+.+|..+..... ..+.|++++++.++++++.++++++.+++++++||++|+.
T Consensus 17 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~ 96 (392)
T 3qhx_A 17 GLATRAIHSGYRPDPATGAVNAPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAFSSGMAAADC 96 (392)
T ss_dssp CHHHHHHHSSCCCCTTTCBSSCCBCCCSBBCCSSTTCCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEESSHHHHHHH
T ss_pred CcchhheeCCCCCCCCCCCccCCcccCcceEecCcccccCCccccCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 35667777664444 37899999999999877654332 3688999899999999999999999999999999999986
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l 164 (301)
++..++++||+|+++++.|+++...+...++..|+++..++.+|++++++++++++++|++++|+||+|.+.|+++|+++
T Consensus 97 al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l 176 (392)
T 3qhx_A 97 ALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQL 176 (392)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHH
Confidence 56668999999999999999988777677788999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHH
Q 022194 165 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (301)
Q Consensus 165 ~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
|+++|+++|+|++|+.+....+...++|+++.|+||++++++++++|+++.+++.+.+.+.......+...++..++.++
T Consensus 177 a~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 256 (392)
T 3qhx_A 177 GADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTM 256 (392)
T ss_dssp HHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred HHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 99999999999999988777788889999999999999766557899999987778787777777788888999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 245 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
..++.+..+.++..++++++.++|++++.+..+.+|+++..|.|.+++++.++.||
T Consensus 257 ~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~ 312 (392)
T 3qhx_A 257 RGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGG 312 (392)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCce
Confidence 99999988999999999999999999999999999999999999999999877665
No 5
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=3.8e-39 Score=288.32 Aligned_cols=292 Identities=25% Similarity=0.443 Sum_probs=250.8
Q ss_pred CccceeeecCCCCC-CCCccccCeeecceeecCCCC--------C-CCCccccCCCCchHHHHHHHHHhhcCCCceEEec
Q 022194 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (301)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~--------~-~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~ 77 (301)
+++|..++-+...+ ..|...+|++.+.+|..+... . ...+.|+++++|.++++++.+++++|.++.++++
T Consensus 25 ~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~s 104 (415)
T 2fq6_A 25 KLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFP 104 (415)
T ss_dssp CHHHHHHHTTCCHHHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CcCceeEeCCCCCCCCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeC
Confidence 35577777663333 379999999999998876531 1 3468899999999999999999999999899999
Q ss_pred chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 78 sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
||++|+. ++..++++||+|+++++.|+++...+...++..|+++.+++.+|++++++++++++++|++++|+||+|.+.
T Consensus 105 sGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~ 184 (415)
T 2fq6_A 105 CGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVH 184 (415)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEee
Confidence 9999986 666688999999999999999987776677888999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHH--cCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCC
Q 022194 157 DIRKIAEMAHA--HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (301)
Q Consensus 157 ~l~~l~~l~~~--~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
|+++|+++|++ +|+++|+|++|+.+....+...++|+++.|+||+++++++.++|+++.+++ +.+.+.......+..
T Consensus 185 dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~~~~~G~~ 263 (415)
T 2fq6_A 185 DVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLRENAYLMGQM 263 (415)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHHHHhcCCC
Confidence 99999999999 999999999999877667777899999999999997766666799998764 556666555556777
Q ss_pred CCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+++..++.++++++.+..+.++..+++..+.++|+++|.+..+.+|+++..|.+.+++++.++.||
T Consensus 264 ~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~ 329 (415)
T 2fq6_A 264 VDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSG 329 (415)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCS
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCce
Confidence 788888888888888888999999999999999999999988999999999999998887665544
No 6
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=3.5e-38 Score=281.70 Aligned_cols=293 Identities=44% Similarity=0.744 Sum_probs=243.3
Q ss_pred CccceeeecCCCCC-CC-CccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHH
Q 022194 8 GVSTLLMNFSNEFD-PY-GALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (301)
Q Consensus 8 ~~~~~~~~~~~~~~-~~-g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~ 85 (301)
+++|..++-+...+ .. |...+|++.++++..+.......+.|+++++|...++++.++++++.++.+++++|++|+.+
T Consensus 18 ~~~t~~~h~g~~~~~~~~~~~~~pi~~stt~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~ 97 (403)
T 3cog_A 18 HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVT 97 (403)
T ss_dssp THHHHHHHTTCCGGGSTTCBSSCCBCCCSCBCCC--------------CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHH
T ss_pred CcccEEEeCCCCCCcCCCCCccCCeeccceeecCCccccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 34567777663323 35 89999999999987766544556788888889999999999999999899999999999864
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~ 165 (301)
++.++++||+|++++|.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||+|.+.|+++|+++|
T Consensus 98 ~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la 177 (403)
T 3cog_A 98 ITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIV 177 (403)
T ss_dssp HHTTSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred HHHHhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHH
Confidence 44488999999999999998876666677889999999999999999999999999999999999999999999999999
Q ss_pred HHcC-CEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHH
Q 022194 166 HAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (301)
Q Consensus 166 ~~~~-~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
+++| +++|+|++|+.+....+...++|+++.|+||+++|++++++|+++++++.+.+.+.......+...++..++++.
T Consensus 178 ~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~ 257 (403)
T 3cog_A 178 HKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCN 257 (403)
T ss_dssp TSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred HHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 9999 999999999988776667788999999999999888877899999976677777776666677778888888888
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 245 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
++++.+..+.++..+++..+.+++++++.+..+.+++|+..|++.+..++.++.||
T Consensus 258 ~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~ 313 (403)
T 3cog_A 258 RGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTG 313 (403)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCS
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCce
Confidence 88999888899999999999999999999999999999999999988877654443
No 7
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=8.5e-38 Score=281.34 Aligned_cols=290 Identities=32% Similarity=0.581 Sum_probs=247.9
Q ss_pred cceeeecCCCCC---CCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecc
Q 022194 10 STLLMNFSNEFD---PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (301)
Q Consensus 10 ~~~~~~~~~~~~---~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~s 78 (301)
+|..++-+...+ ..|...+|++.+.+|..+... ....+.|++++++.++++++++++++|.++.+++++
T Consensus 58 ~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g~~~~v~~~s 137 (445)
T 1qgn_A 58 GSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLLMAS 137 (445)
T ss_dssp HHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTCSEEEEESC
T ss_pred ccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhCCCcEEEeCC
Confidence 455566553333 479999999999998876532 224577888888999999999999999999999999
Q ss_pred hHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCc-eEEEEeCCCCCccccc
Q 022194 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWT-KLVWVESPTNPRQQIC 156 (301)
Q Consensus 79 G~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-~~v~i~~~~np~G~~~ 156 (301)
|++|+. ++..++++||+|+++++.|+++...+...++..|++++.++.+|++++++++++++ ++|++++|+||+|.+.
T Consensus 138 G~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~le~p~NptG~v~ 217 (445)
T 1qgn_A 138 GMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPTNPFLRCV 217 (445)
T ss_dssp HHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEEeCCCCCCCccc
Confidence 999986 56668999999999999999887666556788899999999999999999998888 9999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCC
Q 022194 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
|+++|+++|+++|+++|+|++|+.+....+...++|+++.|+||+++|++.+++|++++++ .+.+.+.......+..++
T Consensus 218 dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~~l~~~~~~~g~~~~ 296 (445)
T 1qgn_A 218 DIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPL-KLVSEIRNLHHILGGALN 296 (445)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH-HHHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECH-HHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999988777777789999999999999765556689999875 455666666666677788
Q ss_pred HHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+..++.++++++.+..+.+++.++++++.++|+++|.+..+.+|+++++|+|.+++++.++.||
T Consensus 297 ~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ 360 (445)
T 1qgn_A 297 PNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGG 360 (445)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCS
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCc
Confidence 8888888889999988899999999999999999999888999999999999999988776554
No 8
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=1.3e-37 Score=281.95 Aligned_cols=292 Identities=83% Similarity=1.281 Sum_probs=249.8
Q ss_pred CccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHH
Q 022194 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~ 87 (301)
..++.+++++...++.+..++|++.+.++..+.......+.|++.|++.++++++++++++|.++.+++++|++|+.+++
T Consensus 86 ~~~~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~~l 165 (464)
T 1ibj_A 86 SVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVT 165 (464)
T ss_dssp CHHHHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHH
T ss_pred CcCCeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHH
Confidence 44577888884336788889999988876544444556778887788899999999999999999999999999987666
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~ 167 (301)
.++++||+|++++|.|+++...+...++..|.+++.++.+|++++++++++++++|++++|+||+|.+.|+++|+++|++
T Consensus 166 ~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~ 245 (464)
T 1ibj_A 166 HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHA 245 (464)
T ss_dssp TTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHT
T ss_pred HHhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHH
Confidence 78999999999999999997666667788899999999999999999999999999999999999999999999999999
Q ss_pred cCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc
Q 022194 168 HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (301)
Q Consensus 168 ~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (301)
+|+++|+||+|..+....+...++|+++.|+||+++|++|+++|+++++++.+.+.+.......+...++..++++..++
T Consensus 246 ~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al 325 (464)
T 1ibj_A 246 QGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGI 325 (464)
T ss_dssp TTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHH
T ss_pred cCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhch
Confidence 99999999999887665566678999999999999888898999999987677777766666567777888888888888
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCC
Q 022194 248 KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDN 299 (301)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~ 299 (301)
+.+..+.++..+++..+.+++++++.+..+.+++|...|.+.+.....++.|
T Consensus 326 ~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g 377 (464)
T 1ibj_A 326 KTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAG 377 (464)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCc
Confidence 8888788888888889999999998888999999998888888776655444
No 9
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=4.3e-37 Score=273.64 Aligned_cols=294 Identities=36% Similarity=0.622 Sum_probs=250.2
Q ss_pred CCCccceeeecCCCCCCCCccccCeeecceeecCCC--------CCCCCccccCCCCchHHHHHHHHHhhcCCCceEEec
Q 022194 6 EPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (301)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~ 77 (301)
..+++|..++-+ ..+..|...+|++.+.+|..+.. .....+.|++++++..+++++.+++++|.++.++++
T Consensus 3 ~~~~~t~~~~~~-~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~~ 81 (389)
T 3acz_A 3 AQDITTTLLHPK-GDHVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAFG 81 (389)
T ss_dssp CCCHHHHHHSCS-SCCSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCcceeEEecC-CCCCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEeC
Confidence 345567777766 44558999999999999876552 123467788888899999999999999999999999
Q ss_pred chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 78 sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
||++|+. ++..++++||+|+++++.|+++...+...++..|++++.++..|++++++++++++++|++++|+||+|.+.
T Consensus 82 sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~ 161 (389)
T 3acz_A 82 SGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKVS 161 (389)
T ss_dssp SHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCeec
Confidence 9999986 555678999999999999999876665557788999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCC
Q 022194 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
|+++|+++|+++|+++|+|++|+.+....+...++|+++.|+||+++++++..+|+++++++.+.+.+.......+...+
T Consensus 162 ~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~ 241 (389)
T 3acz_A 162 DIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMA 241 (389)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999887666677889999999999997776543599998873566666665555677788
Q ss_pred HHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+..+++++.+++.+..+.++..++++.+.++|++++.+..+.+|+++..|.+.++.++.++.||
T Consensus 242 ~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~ 305 (389)
T 3acz_A 242 PMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGS 305 (389)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCS
T ss_pred HHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCe
Confidence 8888888888988888889999999999999999999999999999999999998877655443
No 10
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=6.4e-36 Score=266.26 Aligned_cols=288 Identities=41% Similarity=0.654 Sum_probs=239.9
Q ss_pred CccceeeecCCCCCCCCccccCeeecceeecCCCCCC-CCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHH
Q 022194 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATEN-GPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~-~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~ 86 (301)
+.+|..++-+...+..|...+|++.+.+|..+..... ..+.|+++.++..+++++.++++++.++.+++++|++|+.++
T Consensus 7 ~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~~a 86 (393)
T 1n8p_A 7 KFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGSATTATI 86 (393)
T ss_dssp CHHHHHHHTTCCCCSSCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHH
T ss_pred CccceEEecCCCccCCCCcCCCcccccceeeccccccccCcceecCCChhHHHHHHHHHHHhCCCcEEEECChHHHHHHH
Confidence 4456777765333467999999999999987654322 457788888888999999999999998999999999999644
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
+.++++||+|+++.+.|++....+...++..|++++.++.+| +++++++++++++|++++|+||+|.+.|+++|+++|+
T Consensus 87 l~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~ 165 (393)
T 1n8p_A 87 LQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIK 165 (393)
T ss_dssp HHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred HHHcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHH
Confidence 338899999999999999876655557788899999999888 9999999989999999999999999999999999999
Q ss_pred Hc----CCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCcee-eEEEEcchhHHHHHHHhhhhcCCCCCHHhHH
Q 022194 167 AH----GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAEGSGLAPFDCW 241 (301)
Q Consensus 167 ~~----~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (301)
++ |+++|+|++|+.+....+...++|+++.|+||+++ ++|.+. |+++++++.+.+.+.......+...++..++
T Consensus 166 ~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g-~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 244 (393)
T 1n8p_A 166 KHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYIN-GHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAW 244 (393)
T ss_dssp HHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTT-CSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred HhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECccccc-CCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 99 99999999999877666666789999999999995 556555 9988865667676666555566677788888
Q ss_pred HHHcccccHHHHHHHHHHHHHHHHHHHHhCCC-cceEecCCCCCCcchHHHHhhhcc
Q 022194 242 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQVLS 297 (301)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~-v~~v~~p~~~~~~~~~~~~~~~~~ 297 (301)
++..+++.+..+.++..++++.+.++|++++. +..+.+|++...+.+.++.++.++
T Consensus 245 ~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~ 301 (393)
T 1n8p_A 245 LTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRD 301 (393)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGG
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCC
Confidence 77888888888889999999999999999887 877889999988888888776544
No 11
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=9.9e-36 Score=265.66 Aligned_cols=293 Identities=37% Similarity=0.616 Sum_probs=225.1
Q ss_pred CCccceeeecCCCC-CCCCccccCeeecceeecCCCCC--------CCCccccCCCCchHHHHHHHHHhhcCCCceEEec
Q 022194 7 PGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (301)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~g~~~~p~~~~~~~~~~~~~~--------~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~ 77 (301)
++.+|..++-+... +..|...+|++.+.++..+.... ...+.|++++++..+++++.+++++|.++.++++
T Consensus 8 ~~~~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~~ 87 (398)
T 1gc0_A 8 PGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLALA 87 (398)
T ss_dssp CCHHHHHHHTTCCGGGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCcCceeEeCCCCCCCCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 45567777765322 24789999999999887655321 2345677777888999999999999999999999
Q ss_pred chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 78 sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
+|++|+. ++..++++||+|+++++.|+++...+...+...|++++.++..|++++++++++++++|++++|+||+|.+.
T Consensus 88 sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~ 167 (398)
T 1gc0_A 88 SGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMA 167 (398)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcccc
Confidence 9999986 666678999999999999999987665666788999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh-cCCCC
Q 022194 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSGL 235 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 235 (301)
|+++|+++|+++|+++|+|++|+.+....+...++|+++.|+||+++++++..+|+++++++.+.+.+...... .+.+.
T Consensus 168 ~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
T 1gc0_A 168 DIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVL 247 (398)
T ss_dssp CHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCC
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCC
Confidence 99999999999999999999999877666667789999999999997766544599988766554455555555 56778
Q ss_pred CHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCC
Q 022194 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDN 299 (301)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~ 299 (301)
++..++++.++++.+..+.++..++++.+.++|++++.+..+.+|+++..|.+.++.++.++.|
T Consensus 248 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~ 311 (398)
T 1gc0_A 248 SPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPG 311 (398)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCT
T ss_pred CHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCc
Confidence 8888888888888888899999999999999999999998899999998888888776654444
No 12
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2.3e-35 Score=263.63 Aligned_cols=291 Identities=35% Similarity=0.621 Sum_probs=241.3
Q ss_pred ccceeeecCCCCCCCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchH
Q 022194 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~ 80 (301)
++|..++-+...+..+...+|++.+.++..+... ....+.|++.|.+..+++++.+++++|.++.+++++|+
T Consensus 8 ~~t~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~~~~g~ 87 (404)
T 1e5e_A 8 PATACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVATSSGM 87 (404)
T ss_dssp HHHHHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHH
T ss_pred ccceeeecCCCCCCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEEeCChH
Confidence 3466666552223468888999998887765531 23467788878888999999999999999999999999
Q ss_pred HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 022194 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 81 ~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~ 159 (301)
+|+. ++..++++||+|++++|.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||||.+.|++
T Consensus 88 ~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~ 167 (404)
T 1e5e_A 88 GAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKIIDME 167 (404)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccCHH
Confidence 9986 566688999999999999999887665567888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-cCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCcee-eEEEEcchhHHHHHHHhhhhc-CCCCC
Q 022194 160 KIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAE-GSGLA 236 (301)
Q Consensus 160 ~l~~l~~~-~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~ 236 (301)
+|+++|++ +|+++|+|++|+.+.+..+...++|+++.|+||++++++ .+. |+++++++.+.+.+....... +...+
T Consensus 168 ~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g-~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~ 246 (404)
T 1e5e_A 168 RVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHT-DVVAGLICGKADLLQQIRMVGIKDITGSVIS 246 (404)
T ss_dssp HHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSS-CCCCEEEEECHHHHHHHHHTCCCCCCCCCCC
T ss_pred HHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCC-CCeEEEEEECHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999 999999999999887666666789999999999997654 454 999988655543555554444 55678
Q ss_pred HHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCCC
Q 022194 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDNG 300 (301)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~~ 300 (301)
+..++++..+++.+..+.++..++++.+.+++++++.+..+.+|++...|++.+..++.++.|+
T Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~ 310 (404)
T 1e5e_A 247 PHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGS 310 (404)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCS
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCce
Confidence 8888888888888888888999999999999999988888999999998998888877554443
No 13
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=4.5e-34 Score=253.93 Aligned_cols=288 Identities=38% Similarity=0.587 Sum_probs=239.5
Q ss_pred ccceeeecCCC-CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
.+|..++.+.. .+..|...+|++.+.++..+.......+.|+++.++...++++.++++++.++.+++++|++|+. ++
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~ 84 (386)
T 1cs1_A 5 QATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVT 84 (386)
T ss_dssp HHHHHHHTTTTCCTTTCBSSCCBCCCSBBCCSBTTBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHH
T ss_pred cceeEEecCCCccccCCCCCCCccccceeeccccCCCCCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHH
Confidence 34666666532 23579999999999998875544445678888888889999999999999888999999999986 55
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
..++++||+|++++|.|++....+...++..|.++..++.+|++++++++++++++|++++|+||+|.+.|+++|+++|+
T Consensus 85 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 164 (386)
T 1cs1_A 85 TVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAR 164 (386)
T ss_dssp HHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHH
T ss_pred HHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHH
Confidence 56789999999999999987766655667889999999999999999999889999999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc
Q 022194 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (301)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (301)
++|+++|+||+|+.+....+...++|+++.|+||+++++++..+|+++++++.+.+.+.......+...++..++++..+
T Consensus 165 ~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
T 1cs1_A 165 EVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRG 244 (386)
T ss_dssp HTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHH
T ss_pred HcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 99999999999998876656667899999999999977665445999988756666666655555666778777777777
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhc
Q 022194 247 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVL 296 (301)
Q Consensus 247 l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~ 296 (301)
++.+.++.++..++.+.+.+.|++++.+..+.+|++...|...+.....+
T Consensus 245 l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 294 (386)
T 1cs1_A 245 LRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQK 294 (386)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcC
Confidence 88888888899999999999999998888888899888887777665433
No 14
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=5.4e-34 Score=255.53 Aligned_cols=290 Identities=34% Similarity=0.528 Sum_probs=232.9
Q ss_pred cceeeecCCCCCCCCccccCeeecceeecCCCC-------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHH
Q 022194 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSAT-------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (301)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~-------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~a 82 (301)
+|..++-+...+..|...+|++.+.++..+... ....+.|++.+.+..++++++++++++.+++++++||++|
T Consensus 4 ~t~~~~~~~~~~~~~~~~~pi~~s~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a 83 (412)
T 2cb1_A 4 TTLAVLAGLPEDPHGAVGLPIYAVAAYGFKTLEEGQERFATGEGYVYARQKDPTAKALEERLKALEGALEAVVLASGQAA 83 (412)
T ss_dssp HHHHHHTTCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHHHCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHH
T ss_pred cceeeecCCCcCCCCCcCCCccccceeecCChHHHHHHhccccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 355555542233478889999998777654321 1345778887778899999999999999989999999999
Q ss_pred HH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 022194 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 83 i~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
+. ++..++++||+|+++++.|+++...+...++..|.+++.++.+ ++++++++++++++|++++|+||+|.+.|+++|
T Consensus 84 ~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i 162 (412)
T 2cb1_A 84 TFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE-PEAVREALSAKTRAVFVETVANPALLVPDLEAL 162 (412)
T ss_dssp HHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS-HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-HHHHHHHhccCCeEEEEeCCCCCCcccccHHHH
Confidence 86 5666789999999999999988766656678889999999875 999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCcCCc-cccCccCCCCcEEEecccccccCCCCceeeEEEEcch----------------------
Q 022194 162 AEMAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE---------------------- 218 (301)
Q Consensus 162 ~~l~~~~~~~li~D~~~~~~-~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~---------------------- 218 (301)
+++|+++|+++|+|++|+.+ ....+...++|+++.|+||++++|++..+|+++.+++
T Consensus 163 ~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (412)
T 2cb1_A 163 ATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEA 242 (412)
T ss_dssp HHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHH
T ss_pred HHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhc
Confidence 99999999999999999887 5455666789999999999997766534555555433
Q ss_pred ----hHHHHHHHhh-hhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHh
Q 022194 219 ----RLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 293 (301)
Q Consensus 219 ----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~ 293 (301)
.+.+.++... ...+..+++..+++....++.+.++.++..++++++.+.|++++++..+.+|++..+|+|.++++
T Consensus 243 ~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~ 322 (412)
T 2cb1_A 243 LRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARK 322 (412)
T ss_dssp HGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHH
Confidence 2233333322 33445667888888888888888888888899999999999999998899999999999999999
Q ss_pred hhccCCC
Q 022194 294 QVLSDNG 300 (301)
Q Consensus 294 ~~~~~~~ 300 (301)
++++.||
T Consensus 323 ~~~~~~~ 329 (412)
T 2cb1_A 323 YLASGGP 329 (412)
T ss_dssp HCSSSCS
T ss_pred hCCCCce
Confidence 8875554
No 15
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=6e-34 Score=254.14 Aligned_cols=291 Identities=42% Similarity=0.706 Sum_probs=234.9
Q ss_pred ccceeeecCCCCC-CCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecch
Q 022194 9 VSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (301)
Q Consensus 9 ~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG 79 (301)
..|..++-+...+ ..+....|++.+.++..+... ....+.|+++..+..+++++++++++|.++.+++++|
T Consensus 9 ~~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~~sG 88 (398)
T 2rfv_A 9 FNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLATASG 88 (398)
T ss_dssp HHHHHHHTTCCCCTTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSH
T ss_pred CceeEeecCCcCccCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEECCH
Confidence 4466666552222 356777788887776655421 2345677776777899999999999999999999999
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccH
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l 158 (301)
++|+. ++..++++||+|++++|.|+++...+...++..|.+++.++.+|++++++++++++++|++++|+||+|.+.|+
T Consensus 89 ~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l 168 (398)
T 2rfv_A 89 ISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDI 168 (398)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTBCCCH
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCH
Confidence 99986 66667899999999999999998666555578899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc-CCCCCH
Q 022194 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-GSGLAP 237 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 237 (301)
++|+++|+++|+++|+|++|+.+....+...++|+++.|+||++++|++..+|+++++++.+.+.+....... +.+.++
T Consensus 169 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (398)
T 2rfv_A 169 ETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSP 248 (398)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCH
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCH
Confidence 9999999999999999999998877666677899999999999977554334999988655443555555555 667788
Q ss_pred HhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhhccCC
Q 022194 238 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQVLSDN 299 (301)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~~~~~ 299 (301)
..++++..+++.+.++.++..++++.+.++|++++.+..+.+|+++..|...+.....++.|
T Consensus 249 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g 310 (398)
T 2rfv_A 249 FNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPG 310 (398)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCC
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCc
Confidence 88888888888888888889999999999999999888899999988888887766544333
No 16
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=7e-34 Score=255.36 Aligned_cols=291 Identities=33% Similarity=0.486 Sum_probs=234.7
Q ss_pred cceeeecCCCCC-CCCccccCeeecceeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchH
Q 022194 10 STLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (301)
Q Consensus 10 ~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~ 80 (301)
+|..++-+...+ ..|...+|++.+.++..+... ....+.|++++++..+++++.++++++.++.+++++|+
T Consensus 4 ~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~sGt 83 (421)
T 2ctz_A 4 ETLQLHAGYEPEPTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATASGH 83 (421)
T ss_dssp HHHHHHTTCCCCTTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEESSHH
T ss_pred ceeeeeCCCCCCcCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEecCHH
Confidence 355555542233 479999999999998765521 23457788888888999999999999998889999999
Q ss_pred HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEe-cCCCHHHHHhhcCCCceEEEEeCCCCCccccccH
Q 022194 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV-NTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (301)
Q Consensus 81 ~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~-~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l 158 (301)
+|+. ++..++++||+|+++.+.|+++...+...++..|++++.+ +.+|++++++++++++++|++++++||+|.+.|+
T Consensus 84 ~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l 163 (421)
T 2ctz_A 84 AAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDL 163 (421)
T ss_dssp HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccCH
Confidence 9986 5566789999999999999998876655567889999999 8889999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCccccCccCCCCcEEEecccccccCCCCceeeEEEEc-chhH----HHHHH-------
Q 022194 159 RKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVK-GERL----AKELY------- 225 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~-~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~-~~~~----~~~~~------- 225 (301)
++|+++|+++|+++|+|++| +.+....+...++|+++.|+||++++|++..+|+++.+ +..+ .+.+.
T Consensus 164 ~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~ 243 (421)
T 2ctz_A 164 EALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYH 243 (421)
T ss_dssp HHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGT
T ss_pred HHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhh
Confidence 99999999999999999999 77765566677899999999999977654345555542 2111 01110
Q ss_pred ------------------H-hhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCc
Q 022194 226 ------------------F-LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 286 (301)
Q Consensus 226 ------------------~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~ 286 (301)
. .....+..+++..+++...+++.+.++.+++.++++++.++|+++|.+..+.+|+++.+|
T Consensus 244 g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~ 323 (421)
T 2ctz_A 244 GLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHP 323 (421)
T ss_dssp TBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCT
T ss_pred hhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCC
Confidence 0 112345677888888888899998888898899999999999999999888899999999
Q ss_pred chHHHHhhh-ccCCC
Q 022194 287 GHELHYSQV-LSDNG 300 (301)
Q Consensus 287 ~~~~~~~~~-~~~~~ 300 (301)
.|.+++++. ++.||
T Consensus 324 ~~~~~~~~~~~~~g~ 338 (421)
T 2ctz_A 324 HHDRAQKYFKGKPGA 338 (421)
T ss_dssp THHHHHHHHTTCCCS
T ss_pred CHHHHHHhccCCCce
Confidence 999998887 44443
No 17
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.98 E-value=1.2e-30 Score=227.07 Aligned_cols=238 Identities=40% Similarity=0.672 Sum_probs=198.0
Q ss_pred HHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC
Q 022194 59 ALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG 137 (301)
Q Consensus 59 ~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~ 137 (301)
++++.+++++|.++.+++++|++|+. ++..++++||+|++++|.|+++...+...++..|.+++.++..|++++++.++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68899999999999999999999986 55557899999999999999987665544566899999999889999999999
Q ss_pred CCceEEEEeCCCCCccccccHHHHHHHHHH-cCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCceeeEEEEc
Q 022194 138 PWTKLVWVESPTNPRQQICDIRKIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (301)
Q Consensus 138 ~~~~~v~i~~~~np~G~~~~l~~l~~l~~~-~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~ 216 (301)
+++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++|+.+....+...++|+++.|+||++++|++..+|+++++
T Consensus 82 ~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~~ 161 (331)
T 1pff_A 82 PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCSR 161 (331)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEEC
T ss_pred CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEEEeC
Confidence 899999999999999999999999999999 9999999999997766555567899999999999976654227899888
Q ss_pred chhHHHHHHHhhhh-cCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcceEecCCCCCCcchHHHHhhh
Q 022194 217 GERLAKELYFLQNA-EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQV 295 (301)
Q Consensus 217 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~~~~~~~ 295 (301)
++.+.+.+...... .+...++..++.+..+++.+..+.++..++.+.+.+.+++++.+....++++...|...+..+..
T Consensus 162 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~ 241 (331)
T 1pff_A 162 ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQM 241 (331)
T ss_dssp HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHC
T ss_pred cHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhC
Confidence 64666666555544 45567777777776777777777888889999999999998888888889988877777766544
Q ss_pred c
Q 022194 296 L 296 (301)
Q Consensus 296 ~ 296 (301)
+
T Consensus 242 ~ 242 (331)
T 1pff_A 242 K 242 (331)
T ss_dssp S
T ss_pred C
Confidence 3
No 18
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.97 E-value=1.2e-29 Score=226.57 Aligned_cols=230 Identities=19% Similarity=0.235 Sum_probs=188.8
Q ss_pred chHHHHHHHHHhhcCCCceEE---ecchHHHHH-HHHhccCCCCeEEEcC-CCCccHHHHH-------hhhcccCCcEEE
Q 022194 55 PTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLL-------SRVTPKTGVVVK 122 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~---~~sG~~ai~-~~~~~~~~g~~Vlv~~-~~y~~~~~~~-------~~~~~~~g~~~~ 122 (301)
+.++++++.+++++|.+.+++ ++||++|+. ++.++++|||+|++++ +.|+++...+ ...++..|++++
T Consensus 73 ~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~ 152 (427)
T 3i16_A 73 IGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYK 152 (427)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEE
T ss_pred HHHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEE
Confidence 448999999999999998888 899999985 6777899999999998 9999887555 145667899999
Q ss_pred EecC-----CCHHHHHhhcC--CCceEEEEeC----CCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCcc-ccCccC
Q 022194 123 RVNT-----CDLDEVASAIG--PWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPLE 188 (301)
Q Consensus 123 ~~~~-----~d~~~l~~~l~--~~~~~v~i~~----~~np~G~~~~l~~l~~l~~~--~~~~li~D~~~~~~~-~~~~~~ 188 (301)
.++. .|+++++++++ +++++|++++ |+||+|.+.++++|+++|++ +|+++++|++|+.+. ...+..
T Consensus 153 ~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~ 232 (427)
T 3i16_A 153 QVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTD 232 (427)
T ss_dssp ECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGG
T ss_pred EecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccc
Confidence 9997 48999999998 7899999999 99999999999999999999 999999999999887 456777
Q ss_pred CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh--hcCCCCCH-Hh-HHHHHcccccHHHHHHHHHHHHHHH
Q 022194 189 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAP-FD-CWICLRGVKTMALRVEKQQDNAQKI 264 (301)
Q Consensus 189 ~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~l 264 (301)
.++|++++|+||+++|+...++|+++++ +.+.+++..... ..+..+++ .. ++.++++++.+..+++++.+++.++
T Consensus 233 ~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r~~~~~~~a~~l 311 (427)
T 3i16_A 233 VGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHISMEALKGAILC 311 (427)
T ss_dssp GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999976544568999887 456665555322 22222333 33 6778888888899999999999999
Q ss_pred HHHHHhCCCcceEecCCCCCCcchH
Q 022194 265 AEFLASHPRVKKVNYAGLPEHPGHE 289 (301)
Q Consensus 265 ~~~l~~~~~v~~v~~p~~~~~~~~~ 289 (301)
.++|++++. .+ +|+ .++|.|.
T Consensus 312 a~~L~~~g~--~V-~p~-~~~~~~~ 332 (427)
T 3i16_A 312 SRIMELAGF--EV-MPK-YDEKRSD 332 (427)
T ss_dssp HHHHHHTTC--EE-ESC-TTSCCSS
T ss_pred HHHHHhCCC--ee-cCC-CCCCCcc
Confidence 999999875 55 676 5555443
No 19
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.97 E-value=6.1e-29 Score=221.37 Aligned_cols=230 Identities=21% Similarity=0.257 Sum_probs=186.6
Q ss_pred CchHHHHHHHHHhhcCCCceEE---ecchHHHHH-HHHhccCCCCeEEEcC-CCCccHHHHHh------hhcccCCcEEE
Q 022194 54 NPTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLLS------RVTPKTGVVVK 122 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~---~~sG~~ai~-~~~~~~~~g~~Vlv~~-~~y~~~~~~~~------~~~~~~g~~~~ 122 (301)
.+.++++++.+++++|.+.+++ ++||++|+. ++.+++++||+|++++ +.|..+...+. ..++..|++++
T Consensus 58 ~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~ 137 (409)
T 3jzl_A 58 DEGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYS 137 (409)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEE
T ss_pred hhHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEE
Confidence 3458999999999999998888 789999985 6677899999999998 99998875442 45677899999
Q ss_pred EecC-----CCHHHHHhhcCCCceEEEEeC----CCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCcc-ccCccCCC
Q 022194 123 RVNT-----CDLDEVASAIGPWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPLELG 190 (301)
Q Consensus 123 ~~~~-----~d~~~l~~~l~~~~~~v~i~~----~~np~G~~~~l~~l~~l~~~--~~~~li~D~~~~~~~-~~~~~~~~ 190 (301)
.++. .|++++++++++++++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+.+. ...+...+
T Consensus 138 ~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g 217 (409)
T 3jzl_A 138 SVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVG 217 (409)
T ss_dssp ECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGT
T ss_pred EeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccccC
Confidence 9998 589999999999999999999 99999999999999999999 999999999999887 35677789
Q ss_pred CcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcC----CCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHH
Q 022194 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG----SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 266 (301)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 266 (301)
+|++++|+||+++|+...++|+++++ +.+.+.+.......+ .+......++++++++.+..+++++.+++.++.+
T Consensus 218 ~Div~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~~~r~~~~~~~a~~la~ 296 (409)
T 3jzl_A 218 ADIIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAA 296 (409)
T ss_dssp CSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECccccCCccCCceEEEEEeC-HHHHHHHHHHhccccccccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999999976554567999887 556665554332211 2222222556778888888999999999999999
Q ss_pred HHHhCCCcceEecCCCCCCcch
Q 022194 267 FLASHPRVKKVNYAGLPEHPGH 288 (301)
Q Consensus 267 ~l~~~~~v~~v~~p~~~~~~~~ 288 (301)
.|++++. .+ +|+ +++|.+
T Consensus 297 ~L~~~g~--~v-~p~-~~~~~~ 314 (409)
T 3jzl_A 297 MLAEFGV--EA-DPV-WDAPRT 314 (409)
T ss_dssp HHHHTTC--EE-ESC-TTSCCS
T ss_pred HHHhCCC--cc-cCC-CCCCCc
Confidence 9999864 45 565 444443
No 20
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.97 E-value=4.1e-29 Score=223.23 Aligned_cols=236 Identities=20% Similarity=0.231 Sum_probs=190.8
Q ss_pred CccccCCCCchHHHHHHHHHhhcCCCceEE---ecchHHHHH-HHHhccCCCCeEEEcC-CCCccHHHHH-------hhh
Q 022194 46 PYDYTRSGNPTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLL-------SRV 113 (301)
Q Consensus 46 ~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~---~~sG~~ai~-~~~~~~~~g~~Vlv~~-~~y~~~~~~~-------~~~ 113 (301)
.|.|.+ +.++++++.+++++|.+.+++ ++||++|+. ++.++++|||+|++.+ +.|+++...+ ...
T Consensus 68 gy~Y~~---~g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~ 144 (427)
T 3hvy_A 68 GYGYND---IGRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGS 144 (427)
T ss_dssp TTCTTC---HHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCC
T ss_pred CCCCCc---hhHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhH
Confidence 444444 348999999999999998888 899999985 6778999999999998 9999886544 145
Q ss_pred cccCCcEEEEecC----CCHHHHHhhcC--CCceEEEEeC----CCCCccccccHHHHHHHHHH--cCCEEEEeCCcCCc
Q 022194 114 TPKTGVVVKRVNT----CDLDEVASAIG--PWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSP 181 (301)
Q Consensus 114 ~~~~g~~~~~~~~----~d~~~l~~~l~--~~~~~v~i~~----~~np~G~~~~l~~l~~l~~~--~~~~li~D~~~~~~ 181 (301)
++..|++++.++. .|+++++++++ +++++|++++ |+||+|.+.++++|+++|++ +|+++++|++|+.+
T Consensus 145 l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~ 224 (427)
T 3hvy_A 145 LREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEF 224 (427)
T ss_dssp TGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTT
T ss_pred HHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcccc
Confidence 6678999999998 68999999998 8899999999 99999999999999999999 89999999999988
Q ss_pred c-ccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc--C--CCCCHHhHHHHHcccccHHHHHHH
Q 022194 182 V-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE--G--SGLAPFDCWICLRGVKTMALRVEK 256 (301)
Q Consensus 182 ~-~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~l~~~~~~~~~ 256 (301)
. ...+...++|++++|+||+++|+...++|+++++ +.+.+++....... + .+.+...++.++++++.+..++++
T Consensus 225 ~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~~~ 303 (427)
T 3hvy_A 225 VEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVTIE 303 (427)
T ss_dssp TSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccCCeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHHHH
Confidence 7 4577778999999999999976543567999887 55666665533222 2 122233467778888888899999
Q ss_pred HHHHHHHHHHHHHhCCCcceEecCCCCCCcchH
Q 022194 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 289 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~~~v~~v~~p~~~~~~~~~ 289 (301)
+.+++.++.+.|++++. .+ +|+ +++|.|.
T Consensus 304 ~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~ 332 (427)
T 3hvy_A 304 AVKGAVFCARIMELAGF--DV-LPK-YNDKRTD 332 (427)
T ss_dssp HHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSS
T ss_pred HHHHHHHHHHHHHhCCC--ee-cCC-CCCCCce
Confidence 99999999999999874 45 666 5555443
No 21
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.96 E-value=8.3e-29 Score=221.11 Aligned_cols=256 Identities=19% Similarity=0.143 Sum_probs=192.4
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC-----CceEEecchHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA-----DRALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~-----~~~i~~~sG~~ai 83 (301)
..+++|+ +++|.+...+|.+......... ......|.+. |.+. ++++++++++.+|. ++++++++|++++
T Consensus 39 ~~~id~~-~g~~~~~~~~~~v~~a~~~~~~--~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~ 115 (407)
T 3nra_A 39 GRPVDFS-HGDVDAHEPTPGAFDLFSAGVQ--SGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGAL 115 (407)
T ss_dssp SCCEETT-SCCTTTSCCCTTHHHHHHHHHH--HTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred Cceeeec-CcCCCCCCCcHHHHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHH
Confidence 3589999 7788876677766554322111 1112345544 5554 89999999999886 4566666667998
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-------C----CHHHHHhhcCCCceEEEEeCCCCC
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------C----DLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-------~----d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
. ++..++++||+|+++.|.|+++. ..++..|.+++.++. + |++++++++++++++|++++|+||
T Consensus 116 ~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~np 191 (407)
T 3nra_A 116 FLAVAATVARGDKVAIVQPDYFANR----KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNP 191 (407)
T ss_dssp HHHHHTTCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTT
T ss_pred HHHHHHhCCCCCEEEEcCCcccchH----HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCC
Confidence 6 55667899999999999999886 555667888888876 1 899999999888999999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----c------cCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 152 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P------LELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 152 ~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
||.+.+ +++|+++|++||+++|+||+|+.+.+.. . ...+.++++.|+||++ |++|++.|+++++ +
T Consensus 192 tG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~ 269 (407)
T 3nra_A 192 AGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTE-SLSGYRLGVAFGS-R 269 (407)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTT-CCGGGCCEEEEEC-H
T ss_pred CCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCccccc-CCCeeeEEEEEcC-H
Confidence 999988 9999999999999999999998644321 1 1245679999999999 5567889999986 4
Q ss_pred hHHHHHHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 219 RLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.+.+.+.........+.++..++++...++ .+.+.++++.++++++.+.|++++++.
T Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 330 (407)
T 3nra_A 270 AIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVF 330 (407)
T ss_dssp HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCB
T ss_pred HHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 566666666655565666666666655554 257777888888999999998876654
No 22
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.95 E-value=3.8e-27 Score=209.72 Aligned_cols=251 Identities=16% Similarity=0.138 Sum_probs=187.0
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccC--CCC-chHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR--SGN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
..+++|+ +++|+|..++|.+............ ..+...+ +|. +...+++++++++++.++.+++++|++++. ++
T Consensus 43 ~~~id~~-~~~~~g~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l 120 (399)
T 3tqx_A 43 KEVLNFC-ANNYLGLADHPALIKTAQTVVEQYG-FGMASVRFICGTQTIHKELEKDISEFLGTDDTILYSSCFDANGGLF 120 (399)
T ss_dssp EEEEECS-SCCTTSCTTCHHHHHHHHHHHHHHC-SCCCSCCCCCCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTH
T ss_pred eeEEEee-ccCcccccCCHHHHHHHHHHHHHhC-CCCCCcCccccCchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHH
Confidence 4689999 6789997666666544322111000 0011111 244 348999999999999999999999998875 66
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC------CceEEEEeCCCCCccccccHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~ 160 (301)
..++++||.|+++.|.|+++. ..++..|.+++.++..|++++++.+++ ++++|++++|+||||.+.|+++
T Consensus 121 ~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~ 196 (399)
T 3tqx_A 121 ETLLGPEDAIISDELNHASII----DGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKS 196 (399)
T ss_dssp HHHCCTTCEEEEETTCCHHHH----HHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHH
T ss_pred HHhcCCCCEEEECCcccHHHH----HHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHH
Confidence 778899999999999999886 456678899999998899999988874 8999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCccccCc----c-----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh--
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLSRP----L-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-- 229 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~~~----~-----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~-- 229 (301)
|+++|+++|+++|+||+|+.+..... . ..+.|+++.|+||+++|++ +|++++++ .+.+.+.....
T Consensus 197 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~---gG~~~~~~-~~~~~~~~~~~~~ 272 (399)
T 3tqx_A 197 ICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGAS---GGYTSGHK-EIIEWLRNRSRPY 272 (399)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSC---CEEEEECH-HHHHHHHHHCHHH
T ss_pred HHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCc---eEEEEcCH-HHHHHHHHhCcce
Confidence 99999999999999999975543321 1 1267999999999997554 58988875 45555444322
Q ss_pred hcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 230 AEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
....+.++...+++...++. ..+.++++.++.+++.+.|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 273 LFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp HSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 23446666666665555543 4667778888888999998875
No 23
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=4.2e-27 Score=211.71 Aligned_cols=250 Identities=16% Similarity=0.177 Sum_probs=186.6
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCcc-cc-CCCC-chHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYD-YT-RSGN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~-y~-~~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
..+++|+ +++|+|...+|.+............ ..+. |. ..|. +...++++.+++++|.++.+++++|++|+. ++
T Consensus 64 ~~~id~~-~~~~lg~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~G~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al 141 (427)
T 2w8t_A 64 KDTILLG-TYNYMGMTFDPDVIAAGKEALEKFG-SGTCGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGII 141 (427)
T ss_dssp EEEEECS-CCCTTCGGGCHHHHHHHHHHHHHHC-SCCCSCTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred ceEEEEE-CcccccCCCCHHHHHHHHHHHHHhC-CCCcccccccCCcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHH
Confidence 4689999 7789997777776654322211000 1111 11 1244 458999999999999999999999998875 66
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC----CceEEEEeCCCCCccccccHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~----~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
..++++||.|+++.+.|.++.. .++..|.+++.++..|++++++++++ ++++|++++++||+|.+.|+++|+
T Consensus 142 ~~l~~~gd~vl~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~ 217 (427)
T 2w8t_A 142 STLAGKGEYVILDADSHASIYD----GCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMV 217 (427)
T ss_dssp HHHSCTTCEEEEETTCCHHHHH----HHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHH
T ss_pred HHhcCCCCEEEECCcccHHHHH----HHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHH
Confidence 6678999999999999998864 34566889999998899999998875 789999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCcCCccccC---------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh--hhhc
Q 022194 163 EMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAE 231 (301)
Q Consensus 163 ~l~~~~~~~li~D~~~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~--~~~~ 231 (301)
++|++||+++|+||+|+.+.+.. ....++|+++.|+||+++ ++ +|+++++++ +.+.+... ....
T Consensus 218 ~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~---gG~v~~~~~-l~~~l~~~~~~~~~ 292 (427)
T 2w8t_A 218 AVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TV---GGFVVSNHP-KFEAVRLACRPYIF 292 (427)
T ss_dssp HHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SC---CEEEEECCT-TGGGGGGTCHHHHS
T ss_pred HHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cC---CCEEEeCHH-HHHHHHHhcccccc
Confidence 99999999999999998776541 112357999999999995 44 488888754 43433322 1223
Q ss_pred CCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 232 GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.++...+++..+++.+ .+.++++.++.+++.+.|+++
T Consensus 293 ~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (427)
T 2w8t_A 293 TASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM 335 (427)
T ss_dssp SCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 4556666665555554443 677788899999999999875
No 24
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.95 E-value=2.2e-27 Score=212.31 Aligned_cols=251 Identities=16% Similarity=0.086 Sum_probs=185.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CC-chHHHHHHHHHhhcCCCceEEecchHHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~ 87 (301)
..++||+ +|+|+|...+|.+.................+... |. +.+++++++++++++.+..+++++|++++. ++.
T Consensus 59 ~~~ld~~-s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~ 137 (409)
T 3kki_A 59 PDDIILQ-SNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQ 137 (409)
T ss_dssp TTSEECC-CSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHH
T ss_pred CceEEee-ccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHH
Confidence 5789999 7999999888877655322211100011111111 43 347889999999999999999999998885 777
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
.++++||.|++++|.|.++. ..+...|.++..++..|++++++++.+ ++++|++++++||||.+.++++|+++|+
T Consensus 138 ~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~ 213 (409)
T 3kki_A 138 TICQPNTNVYIDFFAHMSLW----EGARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISK 213 (409)
T ss_dssp HHCCTTCEEEEETTSCHHHH----HHHHHTTCEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCcCHHHH----HHHHHcCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHH
Confidence 78999999999999999886 344566889999988899999999974 5899999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCccccC---------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh--hhhcCCCC
Q 022194 167 AHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGL 235 (301)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~ 235 (301)
+||++||+||+|+.+.+.. ....+.|+++.|+||+++++ +|+++++++. .+.+... ....+...
T Consensus 214 ~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~----gg~v~~~~~~-~~~~~~~~~~~~~~~~~ 288 (409)
T 3kki_A 214 EFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR----AGAIWCNNEV-NRCVPFISYPAIFSSTL 288 (409)
T ss_dssp HHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS----CEEEEESSSG-GGTHHHHCHHHHHSBCC
T ss_pred HcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC----ceEEEECHHH-HHHHHHhCcCccccCCC
Confidence 9999999999998755421 11225789999999999643 4888887653 3333322 22234446
Q ss_pred CHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 236 APFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 236 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++..++++..+++.+ .+.++++.++.+++.+.|++.
T Consensus 289 ~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (409)
T 3kki_A 289 LPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL 327 (409)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 666665655555543 456677888888999999875
No 25
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.95 E-value=1.8e-26 Score=204.76 Aligned_cols=254 Identities=15% Similarity=0.159 Sum_probs=180.7
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC----CceEEecchHHHHH-HH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA----DRALCFTSGMAALA-AV 86 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~ 86 (301)
.+++|...+..++ .+|.+....... .....+.|.+...+.++++++++++.+|. ++++++++|++++. ++
T Consensus 28 ~~i~~~~~~~~~~--~~~~v~~a~~~~---~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~ 102 (391)
T 3dzz_A 28 KELPMWIAEMDFK--IAPEIMASMEEK---LKVAAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMV 102 (391)
T ss_dssp TCEECCSSCCSSC--CCHHHHHHHHHH---HTTCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHH
T ss_pred CceeccccCCCCC--CCHHHHHHHHHH---HhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHH
Confidence 6888884433343 344444332221 11133455544323488899999988872 34555566689986 66
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--------CCHHHHHhhcC-CCceEEEEeCCCCCcccc--
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQI-- 155 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~l~-~~~~~v~i~~~~np~G~~-- 155 (301)
..++++||+|+++.|.|+++. ..++..|.+++.++. .|+++++++++ +++++|++++|+||||.+
T Consensus 103 ~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~ 178 (391)
T 3dzz_A 103 RQFTSPGDQILVQEPVYNMFY----SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS 178 (391)
T ss_dssp HHHSCTTCEEEECSSCCHHHH----HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred HHhCCCCCeEEECCCCcHHHH----HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence 677899999999999999986 455677889988886 48999999998 789999999999999999
Q ss_pred -ccHHHHHHHHHHcCCEEEEeCCcCCcccc-----CccCCC---Cc--EEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 156 -CDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELG---AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 156 -~~l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~---~d--i~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
.++++|+++|++||+++|+||+|+.+.+. .....+ .| +++.|+||++ |++|++.|+++++++.+.+.+
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~ 257 (391)
T 3dzz_A 179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTF-NLAALHAACAIIPNPDLRARA 257 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHH-TCTTTCCEEEECCSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhc-cccchhheEEEECCHHHHHHH
Confidence 56999999999999999999999864432 111222 34 9999999999 556789999999866776766
Q ss_pred HHhhhhc-CCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 022194 225 YFLQNAE-GSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS-HPRVK 275 (301)
Q Consensus 225 ~~~~~~~-~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~-~~~v~ 275 (301)
....... ..+.++..+.++...++ .+.+.++++.++++++.+.|++ ++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 314 (391)
T 3dzz_A 258 EESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVK 314 (391)
T ss_dssp HHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 5554322 23444444444433332 2567778888889999999988 67654
No 26
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.95 E-value=5.2e-26 Score=200.63 Aligned_cols=247 Identities=15% Similarity=0.218 Sum_probs=179.4
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA- 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~- 84 (301)
.+++|++....+|. +|.+......... .....|... |.+. ++++.+++.+.+|. ++++++++|++++.
T Consensus 30 ~~i~l~~~~~~~~~--~~~v~~a~~~~~~---~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (370)
T 2z61_A 30 KVIHLEIGEPDFNT--PKPIVDEGIKSLK---EGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFF 104 (370)
T ss_dssp CCEECCCCSCSSCC--CHHHHHHHHHHHH---TTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHH
T ss_pred CEEEccCCCCCCCC--CHHHHHHHHHHHH---cCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHH
Confidence 57888843333443 3444332211110 112345443 4443 66666666665442 35666677789986
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l 164 (301)
++..++++||+|++++|.|+++. ..++..|.+++.++ .|++++++++++++++|++++|+||||.+.+++ |+++
T Consensus 105 ~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l~~~ 178 (370)
T 2z61_A 105 ALSSIIDDGDEVLIQNPCYPCYK----NFIRFLGAKPVFCD-FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE-IYEF 178 (370)
T ss_dssp HHHHHCCTTCEEEEESSCCTHHH----HHHHHTTCEEEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-HHHH
T ss_pred HHHHhcCCCCEEEEeCCCchhHH----HHHHHcCCEEEEeC-CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-HHHH
Confidence 56667899999999999999987 44556788998888 789999999988899999999999999999999 9999
Q ss_pred HHHcCCEEEEeCCcCCcccc----Ccc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCC
Q 022194 165 AHAHGALLLVDNSIMSPVLS----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (301)
Q Consensus 165 ~~~~~~~li~D~~~~~~~~~----~~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
|+++|+++|+||+|+.+.+. ... ..+.|+++.|+||++ |++|++.|++++++ .+.+.+.........+.+
T Consensus 179 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~ 256 (370)
T 2z61_A 179 AYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLY-AMTGWRIGYVISND-EIIEAILKLQQNLFISAP 256 (370)
T ss_dssp HHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTT-TCGGGCCEEEECCH-HHHHHHHHHHHHHTSSSC
T ss_pred HHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhcc-CCccceEEEEEECH-HHHHHHHHHHhhcccCCC
Confidence 99999999999999865542 111 236799999999999 56788999999875 566666665555556677
Q ss_pred HHhHHHHHccccc-----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 237 PFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 237 ~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+..++++...++. +.+.++++.++.+++.+.|+++
T Consensus 257 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 257 TISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp HHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7777777777754 3445667778888888888875
No 27
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.95 E-value=3.7e-26 Score=202.21 Aligned_cols=255 Identities=15% Similarity=0.161 Sum_probs=185.0
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--C--CceEEecchHHHHH-H
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--A--DRALCFTSGMAALA-A 85 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~--~~~i~~~sG~~ai~-~ 85 (301)
..+++|+.....++ .+|.+........ ....+.|.+...+.++++++++++.+| . ++++++++|++++. +
T Consensus 24 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~---~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 98 (383)
T 3kax_A 24 EELIHAWIADMDFE--VPQPIQTALKKRI---EHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTS 98 (383)
T ss_dssp SCCEECCCSSCSSC--CCHHHHHHHHHHH---HSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCeeecccccCCCC--CCHHHHHHHHHHH---hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHH
Confidence 46888884433333 4455544322211 112344554434559999999999987 2 35666666689985 6
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--------CCHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
+..++++||+|+++.|.|+++. ..++..|.+++.++. .|++++++++++++++|++++|+||||.+.+
T Consensus 99 ~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 174 (383)
T 3kax_A 99 IQAFTKENESVLVQPPIYPPFF----EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWK 174 (383)
T ss_dssp HHHHCCTTCEEEECSSCCHHHH----HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCC
T ss_pred HHHhCCCCCEEEEcCCCcHHHH----HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcC
Confidence 6677899999999999999887 455677888888886 3889999999889999999999999999976
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCcCCccccC-----ccC-----CCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 158 ---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~~-----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
+++|+++|+++|+++|+||+|+...+.. ... .+.++++.|+||++ |++|++.|+++++++.+.+.+
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~ 253 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTF-NIAGLQASIIIIPNEKLRQAF 253 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhc-cCcchhheEEEeCCHHHHHHH
Confidence 6667777999999999999998644321 111 25669999999999 666789999998666777766
Q ss_pred HHhhhhcC-CCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 022194 225 YFLQNAEG-SGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRVK 275 (301)
Q Consensus 225 ~~~~~~~~-~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~-~~~v~ 275 (301)
.......+ .+.++..+.++...++. +.+.++++.++++++.+.|++ ++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 310 (383)
T 3kax_A 254 TSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLS 310 (383)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 65554443 35666666665555543 566677888888899999987 66653
No 28
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.95 E-value=4.6e-26 Score=202.19 Aligned_cols=218 Identities=20% Similarity=0.282 Sum_probs=162.5
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
.|.+. |.+. ++++.+++.+.+|. ++++++++|++++. ++..++++||+|++++|.|+.+. ..++..|.+
T Consensus 63 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~ 138 (385)
T 1b5p_A 63 KYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYP----EMVRFAGGV 138 (385)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCE
Confidence 45543 5554 77788888776664 34555555679986 56667899999999999999886 445567888
Q ss_pred EEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc----Cc
Q 022194 121 VKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RP 186 (301)
Q Consensus 121 ~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~----~~ 186 (301)
++.++.+ |++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+...+. ..
T Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 218 (385)
T 1b5p_A 139 VVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP 218 (385)
T ss_dssp EEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCG
T ss_pred EEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCH
Confidence 8888863 688999999888999999999999999965 899999999999999999999865442 11
Q ss_pred cCC--CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc-------cHHHHHHHH
Q 022194 187 LEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-------TMALRVEKQ 257 (301)
Q Consensus 187 ~~~--~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~ 257 (301)
... +.++++.|+||++ |++|+|.|++++++ .+.+.+.........+.+...+.++...++ ++.+.++++
T Consensus 219 ~~~~~~~~i~~~s~SK~~-~~~G~RiG~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 296 (385)
T 1b5p_A 219 GRVAPEHTLTVNGAAKAF-AMTGWRIGYACGPK-EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296 (385)
T ss_dssp GGTCTTTEEEEEESTTTT-TCGGGCCEEEECCH-HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHcCCCCEEEEEechhhc-CCcccceEEEEeCH-HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 222 6789999999999 56788999999864 565655555444444555555555444442 345566777
Q ss_pred HHHHHHHHHHHHhC
Q 022194 258 QDNAQKIAEFLASH 271 (301)
Q Consensus 258 ~~~~~~l~~~l~~~ 271 (301)
.++++.+.+.|+++
T Consensus 297 ~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 297 RRRRDLLLEGLTAL 310 (385)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC
Confidence 78888888888765
No 29
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=3.4e-26 Score=203.76 Aligned_cols=251 Identities=15% Similarity=0.157 Sum_probs=181.1
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccC-CCCc-hHHHHHHHHHhhcCCCceEEecchHHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR-SGNP-TRDALESLLAKLDKADRALCFTSGMAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~-~g~~-~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~ 87 (301)
..+++|+ .++++|...+|.+.................|.. .|.+ .+++++++++++++.++++++++|++++. ++.
T Consensus 43 ~~~idl~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~ 121 (398)
T 3a2b_A 43 RRVLMFG-SNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLS 121 (398)
T ss_dssp EEEEECS-CSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHH
T ss_pred ceEEEee-cccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH
Confidence 4689998 556667655665554432211100011112222 2554 49999999999999988888899999986 666
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC----CceEEEEeCCCCCccccccHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~----~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
.++++||.|++++|.|..+. ..++..|.+++.++..|++++++.+++ ++++|++++++||||.+.++++|++
T Consensus 122 ~~~~~gd~V~~~~p~~~~~~----~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~ 197 (398)
T 3a2b_A 122 CLMGRNDYILLDERDHASII----DGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTS 197 (398)
T ss_dssp HSSCTTCEEEEETTCCHHHH----HHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHH
T ss_pred HHhCCCCEEEECCccCHHHH----HHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHH
Confidence 77899999999999999886 445567899999998899999998875 7899999999999999999999999
Q ss_pred HHHHcCCEEEEeCCcCCcccc---Ccc-C-----CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh-h-hhcC
Q 022194 164 MAHAHGALLLVDNSIMSPVLS---RPL-E-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-Q-NAEG 232 (301)
Q Consensus 164 l~~~~~~~li~D~~~~~~~~~---~~~-~-----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-~-~~~~ 232 (301)
+|+++|+++|+||+|+.+.+. ... . .++|++++|+||+++ ++| |++++++ .+.+.+... . ....
T Consensus 198 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G---G~~~~~~-~~~~~l~~~~~~~~~~ 272 (398)
T 3a2b_A 198 IANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG---GFVAGDA-DVIDFLKHNARSVMFS 272 (398)
T ss_dssp HHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC---EEEEECH-HHHHHHHHHCHHHHSS
T ss_pred HHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCC---cEEEeCH-HHHHHHHHhcccceec
Confidence 999999999999999876542 111 1 125899999999994 655 8888864 555555443 2 2333
Q ss_pred CCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 233 SGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 233 ~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
...++...+++...++. +.+.++++.++++++.+.|+++
T Consensus 273 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 314 (398)
T 3a2b_A 273 ASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH 314 (398)
T ss_dssp BCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc
Confidence 44455444333344433 2456677888888899999876
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.95 E-value=2.6e-26 Score=203.79 Aligned_cols=254 Identities=13% Similarity=0.160 Sum_probs=181.4
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--C--CceEEecchHHHHH-H
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--A--DRALCFTSGMAALA-A 85 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~--~~~i~~~sG~~ai~-~ 85 (301)
..+++|+.... +...+|.+........ ....+.|.+...+.++++++++++.++ . ++++++++|++++. +
T Consensus 32 ~~~i~l~~~~~--~~~~~~~v~~a~~~~~---~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 106 (391)
T 4dq6_A 32 NDLLPMWVADM--DFKAAPCIIDSLKNRL---EQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLL 106 (391)
T ss_dssp SCSEECCSSSC--SSCCCHHHHHHHHHHH---TTCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCceeccccCC--CCCCCHHHHHHHHHHH---hCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHH
Confidence 35688884332 2234454544322211 113345554333448899999999987 3 35666677789986 6
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---------CHHHHHhhcCCCceEEEEeCCCCCcccc-
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---------DLDEVASAIGPWTKLVWVESPTNPRQQI- 155 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---------d~~~l~~~l~~~~~~v~i~~~~np~G~~- 155 (301)
+..++++||+|+++.|.|+++. ..++..|.+++.++.+ |++++++++++ +++|++++|+||||.+
T Consensus 107 ~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~ 181 (391)
T 4dq6_A 107 INELTKANDKIMIQEPVYSPFN----SVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVW 181 (391)
T ss_dssp HHHHSCTTCEEEECSSCCTHHH----HHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCC
T ss_pred HHHhCCCCCEEEEcCCCCHHHH----HHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCc
Confidence 6677899999999999999987 4455678888888765 88999999988 9999999999999999
Q ss_pred --ccHHHHHHHHHHcCCEEEEeCCcCCccccC-----ccCC-----CCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 156 --CDIRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLEL-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 156 --~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~~~-----~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
.++++|+++|++||+++|+||+|+...+.. .... +.++++.|+||++ |++|++.|+++++++.+.+.
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~ 260 (391)
T 4dq6_A 182 TKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTF-NIAGLQSSYVVLPDEKDYKL 260 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHH-TCGGGCCEEEECCSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhc-cCcccceEEEEeCCHHHHHH
Confidence 458999999999999999999998654321 1122 3459999999999 55678999999987667676
Q ss_pred HHHhhhhcC-CCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 022194 224 LYFLQNAEG-SGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS-HPRVK 275 (301)
Q Consensus 224 ~~~~~~~~~-~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~-~~~v~ 275 (301)
+.......+ .+.++..+.++...++ .+.+.++++.++++++.+.|++ .+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 318 (391)
T 4dq6_A 261 LDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLK 318 (391)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 665544333 3556555555444433 2566677888888899999987 56653
No 31
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.95 E-value=6.8e-26 Score=201.08 Aligned_cols=254 Identities=18% Similarity=0.223 Sum_probs=179.4
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~ 84 (301)
..+++|++....++ .+|.+........ ......|... |.+. ++++.+++.+.+|. ++++++++|++++.
T Consensus 30 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~---~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~ 104 (388)
T 1j32_A 30 IDVCSFSAGEPDFN--TPKHIVEAAKAAL---EQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIF 104 (388)
T ss_dssp CCCEECCCSSCSSC--CCHHHHHHHHHHH---HTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred CCEEECCCCCCCCC--CCHHHHHHHHHHH---hcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHH
Confidence 35788884443344 3343333221111 0112345544 4444 77777777776663 24555555679986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
++..++++||+|++++|.|+++. ..++..|.+++.++.+ |++++++++++++++|++++|+||||.+.
T Consensus 105 ~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~ 180 (388)
T 1j32_A 105 NLMLAMIEPGDEVIIPAPFWVSYP----EMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVY 180 (388)
T ss_dssp HHHHHHCCTTCEEEEESSCCTHHH----HHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred HHHHHhcCCCCEEEEcCCCChhHH----HHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCC
Confidence 55667899999999999999986 4445678888888763 78999999988899999999999999996
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCccccC-----ccC-----CCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~~-----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
+ +++|+++|+++|+++|+||+|+.+.+.. ... .+.++++.|+||++ |++|++.|++++++ .+.+.
T Consensus 181 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~ 258 (388)
T 1j32_A 181 TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTY-AMTGWRVGFLAGPV-PLVKA 258 (388)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTT-TCTTTCCEEEECCH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhcc-CCcccceEEEEeCH-HHHHH
Confidence 4 8999999999999999999998654421 111 35789999999999 66788999999875 46666
Q ss_pred HHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 224 LYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
+...........++..+.++...++ .+.+.++++.++++++.+.|++++++.
T Consensus 259 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 314 (388)
T 1j32_A 259 ATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLE 314 (388)
T ss_dssp HHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCB
T ss_pred HHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 6555554455556665554433332 356677888888999999998876654
No 32
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.95 E-value=4.9e-26 Score=200.22 Aligned_cols=248 Identities=15% Similarity=0.204 Sum_probs=180.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~ 87 (301)
..+++|++..++++ .+|.+...... ... ....|. .+...++++.++++++.+ ++++++||++++. ++.
T Consensus 32 ~~~i~l~~~~~~~~--~~~~v~~a~~~--~~~--~~~~y~---~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 32 TKITKLSSNENPLG--TSKKVAAIQAN--SSV--ETEIYP---DGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTR 102 (363)
T ss_dssp SCCEECSSCSCTTC--CCHHHHHHHHT--CBS--CCCBC-------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred CceEEccCCCCCCC--CCHHHHHHHHH--HHH--HhhcCC---CcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHH
Confidence 36789985445555 34544443211 111 122232 234678899999998864 5666666789986 566
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
.++++||+|++++|.|+++. ..++..|.+++.++.+ |++++++++++++++|++++|+||||.+.|+++|.
T Consensus 103 ~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~ 178 (363)
T 3ffh_A 103 VLLDTTTNTVMATPTFVQYR----QNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQ 178 (363)
T ss_dssp HHCSTTCEEEEEESSCHHHH----HHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHccCCCEEEEcCCChHHHH----HHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHH
Confidence 67899999999999999886 4556678899999877 89999999999999999999999999999999999
Q ss_pred HHHHHc--CCEEEEeCCcCCcccc-------CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCC
Q 022194 163 EMAHAH--GALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (301)
Q Consensus 163 ~l~~~~--~~~li~D~~~~~~~~~-------~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
++++.+ |+++|+|++|+..... .....+.++++.|+||++ |++|++.|+++++ +.+.+.+..... .+
T Consensus 179 ~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~--~~ 254 (363)
T 3ffh_A 179 AFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIY-GLASARVGYGIAD-KEIIRQLNIVRP--PF 254 (363)
T ss_dssp HHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTT-CCSSCCCEEEEEC-HHHHHHHHHTCC--SC
T ss_pred HHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhh-cCchhceeeeecC-HHHHHHHHHhCC--CC
Confidence 998887 9999999999843321 112335679999999999 6678899999985 556565554433 45
Q ss_pred CCCHHhHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 234 GLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 234 ~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
+.++..++++...+ +.+.+.++++.++++++.+.|++++++.
T Consensus 255 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 299 (363)
T 3ffh_A 255 NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVK 299 (363)
T ss_dssp CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 56666666665555 3456677888888999999998866654
No 33
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.95 E-value=7.2e-26 Score=200.67 Aligned_cols=250 Identities=17% Similarity=0.149 Sum_probs=181.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC--CC-chHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
..+++|+ ++.++|...+|.+........... ...+..+++ |. +...++++.+++++|.++.+++++|++++. ++
T Consensus 39 ~~~id~~-~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~ 116 (384)
T 1bs0_A 39 RQYLNFS-SNDYLGLSHHPQIIRAWQQGAEQF-GIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVI 116 (384)
T ss_dssp EEEEECS-CCCTTSGGGCHHHHHHHHHHHHHH-CSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred ceEEEee-ccCccCCCCCHHHHHHHHHHHHHh-CCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence 4689999 566677655665554432211100 011111222 33 448999999999999999999999998885 66
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC---CceEEEEeCCCCCccccccHHHHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~---~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
..++++||.|++++|.|..+. ..++..|.+++.++..|++++++.+++ ++++|++++++||||.+.|+++|++
T Consensus 117 ~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~ 192 (384)
T 1bs0_A 117 AAMMAKEDRIAADRLSHASLL----EAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQ 192 (384)
T ss_dssp HHHCCTTCEEEEETTCCHHHH----HHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHH
T ss_pred HHhCCCCcEEEEcccccHHHH----HHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHH
Confidence 667899999999999999876 444567899999998899999998864 3789999999999999999999999
Q ss_pred HHHHcCCEEEEeCCcCCcccc---C----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh--hhcCCC
Q 022194 164 MAHAHGALLLVDNSIMSPVLS---R----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSG 234 (301)
Q Consensus 164 l~~~~~~~li~D~~~~~~~~~---~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~--~~~~~~ 234 (301)
+|+++|+++|+||+|+.+.+. . ....+.|++++|+||+++ ++| |+++++ +.+.+.+.... ...+..
T Consensus 193 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~ 267 (384)
T 1bs0_A 193 VTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSG---AAVLCS-STVADYLLQFARHLIYSTS 267 (384)
T ss_dssp HHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCC---EEEEEC-HHHHHHHHHHCHHHHSSBC
T ss_pred HHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccC---cEEEeC-HHHHHHHHHhchhhhcCCC
Confidence 999999999999999876532 1 112357899999999994 544 888886 45555554432 222234
Q ss_pred CCHHhHHHHHccccc-----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 235 LAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.++..+.++..+++. ..+.++++.++++++.+.|+++
T Consensus 268 ~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (384)
T 1bs0_A 268 MPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL 309 (384)
T ss_dssp CCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc
Confidence 666666555444443 3456677888888999999876
No 34
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.95 E-value=3.9e-26 Score=203.49 Aligned_cols=251 Identities=17% Similarity=0.182 Sum_probs=184.6
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCC--CccccCCC-CchHHHHHHHHHhhcCCCceEEecchHHHHH-HH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENG--PYDYTRSG-NPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~--~~~y~~~g-~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~ 86 (301)
..+++|+ +++++|..++|.+.............. ...|.. | .+...++++.+++++|.++.+++++|++++. ++
T Consensus 45 ~~~id~~-~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~-g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 122 (401)
T 1fc4_A 45 SHVINFC-ANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFIC-GTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLF 122 (401)
T ss_dssp CEEEECC-CSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHH-CCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTH
T ss_pred ccEEEee-ccCcccccCCHHHHHHHHHHHHHhCCCCCCCCccc-CCcHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHH
Confidence 4789999 557888645555554322111000000 011111 2 3458999999999999988899999998875 66
Q ss_pred HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC------CceEEEEeCCCCCccccccHHH
Q 022194 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 87 ~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~ 160 (301)
..++++||.|+++.|.|..+. ..++..|.+++.++..|++++++.+++ ++++|++++|+||||.+.++++
T Consensus 123 ~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~ 198 (401)
T 1fc4_A 123 ETLLGAEDAIISDALNHASII----DGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKG 198 (401)
T ss_dssp HHHCCTTCEEEEETTCCHHHH----HHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHH
T ss_pred HHHcCCCCEEEEcchhHHHHH----HHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHH
Confidence 677899999999999998775 345678899999998899999988864 7899999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCcCCcccc---------CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh--h
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--N 229 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~---------~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~--~ 229 (301)
|.++|+++|+++|+||+|+.+... .....+.|+++.|+||+++++. +|+++++ +.+.+.+.... .
T Consensus 199 i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~---gG~~~~~-~~~~~~l~~~~~~~ 274 (401)
T 1fc4_A 199 VCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGAS---GGYTAAR-KEVVEWLRQRSRPY 274 (401)
T ss_dssp HHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSS---CEEEEEC-HHHHHHHHHHCHHH
T ss_pred HHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCC---CEEEEcC-HHHHHHHHHhCcCc
Confidence 999999999999999999744431 1112357999999999995554 4888886 45556554433 2
Q ss_pred hcCCCCCHHhHHHHHcccccH---HHHHHHHHHHHHHHHHHHHhC
Q 022194 230 AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~ 271 (301)
....+.++..++++..+++.+ .+.++++.++++++.+.|+++
T Consensus 275 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 275 LFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp HHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 234566777777766666554 466788888899999999876
No 35
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.94 E-value=3.1e-26 Score=202.44 Aligned_cols=254 Identities=12% Similarity=0.126 Sum_probs=183.0
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC----CceEEecchHHHHH-H
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA----DRALCFTSGMAALA-A 85 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~ 85 (301)
..+++|++....++ .+|.+........ ......|.+.+...++++.+++.+.++. ++++++++|++++. +
T Consensus 23 ~~~idl~~~~~~~~--~~~~v~~a~~~~~---~~~~~~y~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~ 97 (377)
T 3fdb_A 23 QGVLPLWVAESDFS--TCPAVLQAITDAV---QREAFGYQPDGSLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIA 97 (377)
T ss_dssp TTSEECCSSCCCSC--CCHHHHHHHHHHH---HTTCCSSCCSSCCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCeeeecccCCCCC--CCHHHHHHHHHHH---HcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHH
Confidence 46889985443344 4454443321111 1123345443433477888888776653 35666677789986 6
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---CHHHHHhhcCCCceEEEEeCCCCCcccccc---HH
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTKLVWVESPTNPRQQICD---IR 159 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~ 159 (301)
+..++++||+|+++.|.|+++. ..++..|.+++.++.+ |+++++++++++++++++++|+||||.+.+ ++
T Consensus 98 ~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~ 173 (377)
T 3fdb_A 98 IDHFTPAQSKVIVPTPAYPPFF----HLLSATQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLN 173 (377)
T ss_dssp HHHHSCTTCCEEEEESCCTHHH----HHHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHH
T ss_pred HHHhcCCCCEEEEcCCCcHhHH----HHHHHcCCEEEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 6667899999999999999987 4455678888888876 899999999888999999999999999975 77
Q ss_pred HHHHHHHHcCCEEEEeCCcCCccccC-----cc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLSR-----PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 230 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~~-----~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~ 230 (301)
+|+++|++||+++|+||+|+...+.. +. ..+.++++.|+||++ |.+|++.|+++..++.+.+.+......
T Consensus 174 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~~ 252 (377)
T 3fdb_A 174 ELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAW-NIAGLKCAQIIFSNPSDAEHWQQLSPV 252 (377)
T ss_dssp HHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTT-TCGGGCCEEEECCSHHHHHHHHHSCHH
T ss_pred HHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhc-cCcchhheEEEeCCHHHHHHHHHHHHh
Confidence 78888999999999999998644322 11 123469999999999 567889998888667777766665555
Q ss_pred cCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHh-CCCc
Q 022194 231 EGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRV 274 (301)
Q Consensus 231 ~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~-~~~v 274 (301)
...+.++..++++...++. +.+.++++.++.+++.+.|++ +|++
T Consensus 253 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (377)
T 3fdb_A 253 IKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGA 301 (377)
T ss_dssp HHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred hcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 5566666666665444433 466777888888899999987 5654
No 36
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=8.9e-26 Score=200.60 Aligned_cols=249 Identities=18% Similarity=0.211 Sum_probs=176.9
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA- 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~- 84 (301)
.+++|++....++. +|.+......... .....|... |.+. ++++.+++.+.+|. +++++++||++++.
T Consensus 42 ~~i~l~~~~~~~~~--~~~v~~a~~~~~~---~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~ 116 (389)
T 1o4s_A 42 DVINLTAGEPDFPT--PEPVVEEAVRFLQ---KGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFN 116 (389)
T ss_dssp CCEECCCSSCSSCC--CHHHHHHHHHHHT---TCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHH
T ss_pred CEEEccCCCCCCCC--CHHHHHHHHHHHh---cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHH
Confidence 57888744333442 3433332211111 112345443 4443 66666666665564 35556666678986
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
++..++++||+|++++|.|+++. ..++..|.+++.++.+ |++++++++++++++|++++|+||||.+.+
T Consensus 117 ~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~ 192 (389)
T 1o4s_A 117 AFMALLDPGDEVIVFSPVWVSYI----PQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYR 192 (389)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCC
Confidence 56667889999999999999987 4445678888888753 789999999888999999999999999976
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCcCCccccC----cc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHH
Q 022194 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLSR----PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 226 (301)
Q Consensus 158 ---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~ 226 (301)
+++|+++|+++|+++|+||+|+.+.+.. .. ..+.|+++.|+||++ |++|++.|++++++ .+.+.+..
T Consensus 193 ~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~l~~~~-~~~~~l~~ 270 (389)
T 1o4s_A 193 REFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSH-SMTGWRVGYLISSE-KVATAVSK 270 (389)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTT-TCGGGCCEEEECCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhc-CCcccceEEEEeCH-HHHHHHHH
Confidence 9999999999999999999998765421 11 146899999999999 56788899999864 56666655
Q ss_pred hhhhcCCCCCHHhHHHHHccccc-HHHHHHHHHHHHHHHHHHHHhC
Q 022194 227 LQNAEGSGLAPFDCWICLRGVKT-MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.......+.++..+.++...++. +.+.++++.++++.+.+.|+++
T Consensus 271 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 271 IQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp HHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc
Confidence 55544555666666655555543 5666778888888999999875
No 37
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.94 E-value=4.9e-26 Score=201.12 Aligned_cols=214 Identities=17% Similarity=0.206 Sum_probs=166.3
Q ss_pred HHHHHHHHHhhcC---CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 57 RDALESLLAKLDK---ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~---~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
..++++.++++++ .+++++++||++|+. ++..++++||+|+++.|.|+++. ..++..|.+++.++.+
T Consensus 65 ~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~ 140 (375)
T 3op7_A 65 SPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLY----DIPKSLGAEVDLWQIEEENGW 140 (375)
T ss_dssp CHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHH----HHHHHTTCEEEEEEEEGGGTT
T ss_pred hHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHHcCCEEEEEeccccCCC
Confidence 5678888888763 246777777789986 66778899999999999999986 4456678888887754
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----ccCCCCcEEEecc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSA 198 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~ 198 (301)
|++++++++++++++|++++|+||+|.+.+ +++|+++|++||+++|+||+|+...... ....+.++++.|+
T Consensus 141 ~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~ 220 (375)
T 3op7_A 141 LPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSL 220 (375)
T ss_dssp EECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEES
T ss_pred CCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEC
Confidence 899999999999999999999999999998 9999999999999999999998654431 1123567999999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccH----HHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
||++ |.+|++.|++++ ++.+.+.+.......+.+.++..++++...++.. .+.++.+.++++.+.+.|++++.+
T Consensus 221 sK~~-~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 298 (375)
T 3op7_A 221 SKTY-SLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLV 298 (375)
T ss_dssp SSSS-SCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred hhhc-CCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 9999 556788999998 4667776666665555566666666655555443 344555677888899999887766
Q ss_pred ce
Q 022194 275 KK 276 (301)
Q Consensus 275 ~~ 276 (301)
..
T Consensus 299 ~~ 300 (375)
T 3op7_A 299 SY 300 (375)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 38
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.6e-26 Score=206.83 Aligned_cols=252 Identities=14% Similarity=0.150 Sum_probs=177.2
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~ 84 (301)
..+++|+.+...++ .+|.+......... ......|++. |.+. ++++.+++.+.+|. ++++++++|++|+.
T Consensus 57 ~~~i~l~~g~~~~~--~~~~v~~a~~~~~~--~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~ 132 (447)
T 3b46_A 57 RELINLGQGFFSYS--PPQFAIKEAQKALD--IPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGIL 132 (447)
T ss_dssp SCCEECCCCSCSSC--CCHHHHHHHHHHTT--SGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHH
T ss_pred CCeEEccCCCCCCC--CCHHHHHHHHHHHh--CcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 46889984443344 34444433222111 1122356554 5554 77788888777664 24555555579985
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-----------------CCHHHHHhhcCCCceEEEEe
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------------CDLDEVASAIGPWTKLVWVE 146 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-----------------~d~~~l~~~l~~~~~~v~i~ 146 (301)
++..++++||+|++++|.|+++.. .++..|.+++.++. .|++++++++.+++++|+++
T Consensus 133 ~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~ 208 (447)
T 3b46_A 133 SCLMGLLNAGDEVIVFEPFFDQYIP----NIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN 208 (447)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEE
T ss_pred HHHHHHcCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEe
Confidence 666678999999999999999874 44566777776653 27899999998889999999
Q ss_pred CCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCccccC----cc-----CCCCcEEEecccccccCCCCceeeEEE
Q 022194 147 SPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSR----PL-----ELGADIVMHSATKFIAGHSDVMAGVLA 214 (301)
Q Consensus 147 ~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~-----~~~~di~~~S~sK~~~g~~g~~~g~~~ 214 (301)
+|+||||.+. ++++|+++|++||+++|+||+|+...+.. .. ..+.++++.|+||++ +++|++.|+++
T Consensus 209 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~riG~~~ 287 (447)
T 3b46_A 209 TPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSF-AATGWRIGWVL 287 (447)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHT-TCTTSCCEEEE
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhc-CCcchhhEEEE
Confidence 9999999996 58999999999999999999998644321 11 236899999999999 55688999999
Q ss_pred EcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHHHHHHHHhC
Q 022194 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++++.+.+.+.........+.++..+.++...++. +.+.++++.++++.+.+.|+++
T Consensus 288 ~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 288 SLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp CSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 94456666665555444555566655555444432 4556677788888888888865
No 39
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.94 E-value=5e-25 Score=193.50 Aligned_cols=238 Identities=17% Similarity=0.170 Sum_probs=172.0
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecch-HHHHH-HHHh
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVTH 88 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~-~~~~ 88 (301)
.+++|++..+.+|.. |.+ . . .....|.. +...++++.++++++.+ +.+++++| ++++. ++..
T Consensus 30 ~~i~l~~~~~~~~~~--~~v---a-----~--~~~~~Y~~---~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~ 94 (356)
T 1fg7_A 30 GDVWLNANEYPTAVE--FQL---T-----Q--QTLNRYPE---CQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRA 94 (356)
T ss_dssp CSEECSSCCCSSCCC--CCC---C-----C--CCTTSCCC---SSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHH
T ss_pred ceEEeeCCCCCCCCC--HhH---h-----h--hhhccCCC---ccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHH
Confidence 579998666677753 433 1 0 12233433 23578889999998876 45555555 68886 5666
Q ss_pred ccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCccccccH---H
Q 022194 89 LLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI---R 159 (301)
Q Consensus 89 ~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l---~ 159 (301)
++++| |+|++++|.|+++.. .++..|.+++.++.+ |+++++++++ ++++|++++|+||||.+.+. +
T Consensus 95 ~~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~ 169 (356)
T 1fg7_A 95 FCEPGKDAILYCPPTYGMYSV----SAETIGVECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFR 169 (356)
T ss_dssp HCCTTTCEEEECSSSCTHHHH----HHHHHTCEEEECCCCTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HhCCCCCEEEEeCCChHHHHH----HHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHH
Confidence 78899 999999999999874 445568888888753 7899999888 89999999999999999875 4
Q ss_pred HHHHHHHHcCCEEEEeCCcCCccc-cC----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCC
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVL-SR----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~-~~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
+|+++|+ +|+++|+||+|+.... .. ....+.++++.|+||++ |++|+|.|++++++ .+.+.+..... .++
T Consensus 170 ~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~-~~~~~l~~~~~--~~~ 244 (356)
T 1fg7_A 170 TLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAF-ALAGLRCGFTLANE-EVINLLMKVIA--PYP 244 (356)
T ss_dssp HHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTT-CCGGGCCEEEEECH-HHHHHHHHHSC--SSC
T ss_pred HHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhh-cCchhhhEEEEeCH-HHHHHHHHhcC--CCC
Confidence 5556666 9999999999985431 11 12346789999999999 66788999999864 55565544333 335
Q ss_pred CCHHhHHHHHccccc-----HHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 235 LAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 235 ~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
.++..+.++...++. +.+.++++.++++++.+.|++++.+
T Consensus 245 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 289 (356)
T 1fg7_A 245 LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCV 289 (356)
T ss_dssp SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTE
T ss_pred CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 666666666666553 4556677788888999999887653
No 40
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.94 E-value=9.1e-26 Score=197.80 Aligned_cols=244 Identities=14% Similarity=0.162 Sum_probs=180.2
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~ 87 (301)
..+++|+++.++++ .+|.+......... ....| ..+...+++++++++++.+ ++++++||++++. ++.
T Consensus 16 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~~----~~~~y---~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~ 86 (354)
T 3ly1_A 16 DNPIRINFNENPLG--MSPKAQAAARDAVV----KANRY---AKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIE 86 (354)
T ss_dssp SSCEECSSCCCSSC--CCHHHHHHHHHTGG----GTTSC---CHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHH
T ss_pred CceEEccCCCCCCC--CCHHHHHHHHHHHh----hCcCC---CCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHH
Confidence 47899985555555 44544443221111 12222 2345789999999999864 5555666679986 556
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcC--CCceEEEEeCCCCCccccccHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~--~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
.++++||+|+++.|.|+++. ..++..|.+++.++.+ |+++++++++ +++++|++++|+||||.+.++++
T Consensus 87 ~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 162 (354)
T 3ly1_A 87 AYASLEAQLVIPELTYGDGE----HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADV 162 (354)
T ss_dssp HHCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHH
T ss_pred HHhCCCCeEEECCCCchHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHH
Confidence 67899999999999999986 4556788999999987 8999999998 78999999999999999999888
Q ss_pred HHHHHHH--cCCEEEEeCCcCCccccC----c----cCC-CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh
Q 022194 161 IAEMAHA--HGALLLVDNSIMSPVLSR----P----LEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (301)
Q Consensus 161 l~~l~~~--~~~~li~D~~~~~~~~~~----~----~~~-~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~ 229 (301)
+.++++. +|+++|+|++|+...... . ... +.++++.|+||++ |.+|++.|+++++ +.+.+.+.....
T Consensus 163 l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~~~~~~~ 240 (354)
T 3ly1_A 163 IEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIH-AMAGMRVGYAVAH-PTVIALMGRYVA 240 (354)
T ss_dssp HHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTT-CCGGGCCEEEECC-HHHHHHHGGGTT
T ss_pred HHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhc-cChhhhheeeecC-HHHHHHHHHhcC
Confidence 8888777 999999999998554431 1 122 6779999999999 6677889999986 456565544433
Q ss_pred hcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 230 AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
. .+.++..+.++...++. +.+.++++.++++++.+.|+++
T Consensus 241 ~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 283 (354)
T 3ly1_A 241 G--EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL 283 (354)
T ss_dssp C--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3 56667666666555554 5667778888888899988875
No 41
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.94 E-value=1e-25 Score=201.59 Aligned_cols=250 Identities=14% Similarity=0.142 Sum_probs=171.6
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC-----CceEEecchHHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA-----DRALCFTSGMAALA 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~-----~~~i~~~sG~~ai~ 84 (301)
.+++|+++...++ .+|.+......... ......|.+. |.+. ++++.+++.+.+|. ++++++++|++++.
T Consensus 38 ~~idl~~g~~~~~--~~~~v~~a~~~~~~--~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~ 113 (412)
T 2x5d_A 38 DIIDLSMGNPDGP--TPPHIVEKLCTVAQ--REDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLA 113 (412)
T ss_dssp CCEECSSCCCCSC--CCHHHHHHHHHTC-----------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHH
T ss_pred CEEecCCCCCCCC--CCHHHHHHHHHHHh--CCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHH
Confidence 5789985444444 34544443211111 1112345433 4443 66666666655563 35666667789986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
++..++++||+|+++.|.|+++.. .++..|.+++.++.+ |++++++++++++++|++++|+||||.+.
T Consensus 114 ~~~~~~~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~ 189 (412)
T 2x5d_A 114 HLMLATLDHGDTILVPNPSYPIHIY----GAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCV 189 (412)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHHH----HHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHH----HHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcC
Confidence 566678899999999999999874 344567888887764 46888888888899999999999999997
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCcccc-----CccC----CCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
+ +++|+++|++||+++|+||+|+.+.+. .... .+.++++.|+||++ |++|++.|+++++ +.+.+.+
T Consensus 190 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l 267 (412)
T 2x5d_A 190 ELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY-NMAGWRIGFMVGN-PELVSAL 267 (412)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CC-SCTTSCCEEEEEC-HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCcccc-CCcccceEEEEcC-HHHHHHH
Confidence 5 788999999999999999999875542 1111 36789999999999 5567889999986 4566666
Q ss_pred HHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 225 YFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.......+.+.++..+.++...++ .+.+.++++.++++.+.+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (412)
T 2x5d_A 268 ARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA 318 (412)
T ss_dssp HHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 655555555666666655544443 25666777888888888888764
No 42
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.94 E-value=1.5e-25 Score=198.97 Aligned_cols=249 Identities=14% Similarity=0.175 Sum_probs=175.7
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----Cc-eEEecchHHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DR-ALCFTSGMAALA 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~-~i~~~sG~~ai~ 84 (301)
.+++|++....++ .+|.+........+ .....|... |.+. ++++.+++.+.+|. ++ ++++++|++++.
T Consensus 27 ~~i~l~~~~~~~~--~~~~v~~a~~~~~~---~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~ 101 (389)
T 1gd9_A 27 DVISLGIGEPDFD--TPQHIKEYAKEALD---KGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFL 101 (389)
T ss_dssp SCEECCCCSCSSC--CCHHHHHHHHHHHH---TTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHH
T ss_pred CeEecCCCCCCCC--CCHHHHHHHHHHHh---CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHH
Confidence 5788874443344 34434332211110 112345543 4444 66777777666663 35 666677789986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
++..++++||+|++++|.|+++.. .++..|.+++.++.+ |++++++++++++++|++++|+||||.+.
T Consensus 102 ~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~ 177 (389)
T 1gd9_A 102 MGLSAFLKDGEEVLIPTPAFVSYAP----AVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVL 177 (389)
T ss_dssp HHHTTTCCTTCEEEEEESCCTTHHH----HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHH----HHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCC
Confidence 555668899999999999999874 445567888877743 78999999988899999999999999997
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCccccC-----ccC----CCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~~----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
+ +++|+++|++||+++|+||+|+.+.+.. ... .+.|+++.|+||++ |++|++.|+++++ +.+.+.+
T Consensus 178 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l 255 (389)
T 1gd9_A 178 TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTF-AMTGWRLGFVAAP-SWIIERM 255 (389)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhc-CCcccceEEEEEC-HHHHHHH
Confidence 4 9999999999999999999998765421 111 35689999999999 5678889999987 4566666
Q ss_pred HHhhhhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHHHHHHHHhC
Q 022194 225 YFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.........+.++..+.++...++. +.+.++++.++++.+.+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 256 VKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308 (389)
T ss_dssp HHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6555544556666666665555543 3455567778888888888875
No 43
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.94 E-value=1.6e-25 Score=197.22 Aligned_cols=247 Identities=15% Similarity=0.170 Sum_probs=174.3
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~~~~ 88 (301)
..+++|++..+.+| .+|.+......... ....|. .+...++++.++++++.+ +++++++|++++.++..
T Consensus 24 ~~~idl~~~~~~~~--~~~~v~~a~~~~~~----~~~~y~---~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~ 94 (364)
T 1lc5_A 24 DQLLDFSANINPLG--MPVSVKRALIDNLD----CIERYP---DADYFHLHQALARHHQVPASWILAGNGETESIFTVAS 94 (364)
T ss_dssp GGSEECSSCCCTTC--CCHHHHHHHHHTGG----GGGSCC---CTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHH
T ss_pred cceEEeccccCCCC--CCHHHHHHHHHHHH----HhhcCC---CCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHH
Confidence 35889984443455 34444433211111 112333 233678888888888865 44555555799875555
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCC------HHHHHhhcCCCceEEEEeCCCCCcccccc---HH
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD------LDEVASAIGPWTKLVWVESPTNPRQQICD---IR 159 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d------~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~ 159 (301)
.+ +||+|+++.|.|+++. ..++..|.+++.++.+. ++++.+.+.+++++|++++|+||||.+.+ ++
T Consensus 95 ~~-~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 169 (364)
T 1lc5_A 95 GL-KPRRAMIVTPGFAEYG----RALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQ 169 (364)
T ss_dssp HH-CCSEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHH
T ss_pred Hc-CCCeEEEeCCCcHHHH----HHHHHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 55 7899999999999987 44456788888888652 35566666678899999999999999987 89
Q ss_pred HHHHHHHHcCCEEEEeCCcCCcccc--C----ccCCCCcEEEecccccccCCCCceeeEEE-EcchhHHHHHHHhhhhcC
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLS--R----PLELGADIVMHSATKFIAGHSDVMAGVLA-VKGERLAKELYFLQNAEG 232 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~--~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~-~~~~~~~~~~~~~~~~~~ 232 (301)
+|+++|+++|+++|+||+|+.+.+. . ....+.++++.|+||++ |++|++.|+++ .+ +.+.+.+..... .
T Consensus 170 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~l~~~~~--~ 245 (364)
T 1lc5_A 170 AIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFY-AIPGLRLGYLVNSD-DAAMARMRRQQM--P 245 (364)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTT-TCTTTCCEEEECCC-HHHHHHHHHHSC--T
T ss_pred HHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhh-cCCccceEEEEECC-HHHHHHHHHhCC--C
Confidence 9999999999999999999865431 1 12346789999999999 55678899999 65 556565544332 4
Q ss_pred CCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 233 SGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 233 ~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
++.++..++++...++. +.+.++++.++++++.+.|++++++.
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 291 (364)
T 1lc5_A 246 WSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLT 291 (364)
T ss_dssp TCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred CCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 55677777777666665 45666777888888999998876654
No 44
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.94 E-value=3.2e-26 Score=205.56 Aligned_cols=256 Identities=16% Similarity=0.166 Sum_probs=181.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC----CceEEecchHHHHH-H
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA----DRALCFTSGMAALA-A 85 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~ 85 (301)
..+++|+.....++ .+|.+........ ....+.|.....+.++++++++++.++. ++++++++|++|+. +
T Consensus 61 ~~~i~~~~~~~~~~--~~~~v~~a~~~~~---~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a 135 (421)
T 3l8a_A 61 PELLQMWVADMDFL--PVPEIKEAIINYG---REHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIA 135 (421)
T ss_dssp TTCEECCSSCCCSC--CCHHHHHHHHHHH---HHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCeeecccCCCCCC--CCHHHHHHHHHHH---hcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHH
Confidence 46788874433333 4454443321111 1133455554434488899999988872 24555566678986 6
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--------CHHHHHhhcC-CCceEEEEeCCCCCcccc-
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIG-PWTKLVWVESPTNPRQQI- 155 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--------d~~~l~~~l~-~~~~~v~i~~~~np~G~~- 155 (301)
+..++++||+|+++.|.|+++. ..+...|.+++.++.+ |+++++++++ +++++|++++|+||+|.+
T Consensus 136 ~~~~~~~gd~Vi~~~~~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~ 211 (421)
T 3l8a_A 136 LQAFSEKGDAVLINSPVYYPFA----RTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVW 211 (421)
T ss_dssp HHHHSCTEEEEEEEESCCHHHH----HHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCC
T ss_pred HHHhcCCCCEEEECCCCcHHHH----HHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcC
Confidence 6667889999999999999987 4445678888887753 8999999998 789999999999999998
Q ss_pred --ccHHHHHHHHHHcCCEEEEeCCcCCccccC-----c-----cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 156 --CDIRKIAEMAHAHGALLLVDNSIMSPVLSR-----P-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 156 --~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~-----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
.++++|+++|++||+++|+||+|+...+.. . ...+.++++.|+||++ |++|++.|+++++++.+.+.
T Consensus 212 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~~~G~~~~~~~~l~~~ 290 (421)
T 3l8a_A 212 DNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTF-NIAGTKNSFAIIQNESLRRK 290 (421)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHH-TCGGGCCEEEECCSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhc-cCchhheEeEEcCCHHHHHH
Confidence 469999999999999999999997543321 1 1135669999999999 55678899999986677776
Q ss_pred HHHhhhhcC-CCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhCCCcce
Q 022194 224 LYFLQNAEG-SGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 224 ~~~~~~~~~-~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~v~~ 276 (301)
+.......+ .+.++..+.++...++ .+.+..+++.++.+++.+.|++++++..
T Consensus 291 ~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~ 348 (421)
T 3l8a_A 291 FQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKV 348 (421)
T ss_dssp HHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEE
T ss_pred HHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 665543333 3556666555544433 3566677788888889999987666543
No 45
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.94 E-value=1.5e-25 Score=199.41 Aligned_cols=250 Identities=18% Similarity=0.173 Sum_probs=180.4
Q ss_pred cceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC-----C-ceEEecchHH
Q 022194 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA-----D-RALCFTSGMA 81 (301)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~-----~-~~i~~~sG~~ 81 (301)
...+++|++....++ .+|.+........+ ....|.+. |.+. ++++.+++++.+|. + +++++++|++
T Consensus 29 g~~~i~l~~~~~~~~--~~~~v~~a~~~~~~----~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~ 102 (396)
T 3jtx_A 29 GMEAVPLHIGEPKHP--TPKVITDALTASLH----ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSRE 102 (396)
T ss_dssp TCCCEECSCCSCCSC--CCHHHHHHHHHTGG----GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHH
T ss_pred CCCeEEeCCcCCCCC--CCHHHHHHHHHHhh----hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHH
Confidence 357899984443444 34544433211111 23455554 5544 88888888887763 3 4555566678
Q ss_pred HHH-HHHhccCCC-----CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCC
Q 022194 82 ALA-AVTHLLGTG-----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 82 ai~-~~~~~~~~g-----~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
++. ++..++++| |+|+++.|.|+++. ..++..|.+++.++.+ |++++++++.+++++|++++|+
T Consensus 103 al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~ 178 (396)
T 3jtx_A 103 ALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE----GATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPN 178 (396)
T ss_dssp HHHHHHHHHCCC---CCCCEEEEEESCCHHHH----HHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSC
T ss_pred HHHHHHHHHhCCCCccCCCEEEEcCCCcHhHH----HHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCC
Confidence 986 566778886 79999999999886 4556778888888853 6788888888889999999999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC--cc-----------CCCCcEEEecccccccCCCCceeeEE
Q 022194 150 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--PL-----------ELGADIVMHSATKFIAGHSDVMAGVL 213 (301)
Q Consensus 150 np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~--~~-----------~~~~di~~~S~sK~~~g~~g~~~g~~ 213 (301)
||||.+.+ +++|+++|++||+++|+||+|+...+.. +. ..+.++++.|+||.+ +.+|++.|++
T Consensus 179 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~ 257 (396)
T 3jtx_A 179 NPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS-NVPGLRSGFV 257 (396)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTS-SCGGGCCEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEecccccc-CCcccceEEE
Confidence 99999986 5559999999999999999998654432 11 257889999999998 5568899999
Q ss_pred EEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 214 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+ +.+.+.+.......+.+.++..+.++...+ +.+.+.++++.++.+.+.+.|+++
T Consensus 258 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 317 (396)
T 3jtx_A 258 AGD-AELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV 317 (396)
T ss_dssp EEC-HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EeC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 876 456666666666666667776666654444 345677778888888899988775
No 46
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.94 E-value=8.2e-26 Score=199.09 Aligned_cols=253 Identities=17% Similarity=0.202 Sum_probs=180.4
Q ss_pred CCccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC---CceEEecchHHHH
Q 022194 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAAL 83 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai 83 (301)
++....+++|++..+.++ .+|.+......... . ..+..++.+...++++++++++|. ++++++++|++++
T Consensus 26 ~~~~~~~i~l~~~~~~~~--~~~~v~~a~~~~~~--~---~~~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~ 98 (367)
T 3euc_A 26 VPDSHGLVKLDAMENPYR--LPPALRSELAARLG--E---VALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEII 98 (367)
T ss_dssp CCCCTTCEECCSSCCCCC--CCHHHHHHHHHHHH--H---HHTTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHH
T ss_pred CCCCCCeeEccCCCCCCC--CCHHHHHHHHHHhh--h---hhhhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHH
Confidence 334467899984443444 34444433211100 0 011222334578999999999987 3455555567898
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCC-CceEEEEeCCCCCccccc
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~-~~~~v~i~~~~np~G~~~ 156 (301)
. ++..++++||+|+++.|.|+++. ..++..|.+++.++.+ |++++++++++ ++++|++++|+||||.+.
T Consensus 99 ~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 174 (367)
T 3euc_A 99 SMLALAAARPGAKVMAPVPGFVMYA----MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLF 174 (367)
T ss_dssp HHHHHHTCCTTCEEEEEESCSCCSC----HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCC
T ss_pred HHHHHHHcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCC
Confidence 6 56667899999999999999986 4556788999888854 89999999987 899999999999999996
Q ss_pred ---cHHHHHHHHHHc--CCEEEEeCCcCCcccc----CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh
Q 022194 157 ---DIRKIAEMAHAH--GALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (301)
Q Consensus 157 ---~l~~l~~l~~~~--~~~li~D~~~~~~~~~----~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~ 227 (301)
++++|+++|++| |+++|+||+|+..... .....+.++++.|+||+ +.+|++.|+++++ +.+.+.+...
T Consensus 175 ~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~--~~~G~r~G~~~~~-~~~~~~~~~~ 251 (367)
T 3euc_A 175 DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL--GLAGIRLGYVAGD-PQWLEQLDKV 251 (367)
T ss_dssp CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT--TSCSCCEEEEEEC-HHHHHHHGGG
T ss_pred CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh--cccccCceeeeeC-HHHHHHHHHh
Confidence 478888889999 9999999999853322 22234677999999999 4567899999986 4555544333
Q ss_pred hhhcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 228 QNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.. .++.++..++++...++. +.++++++.++++++.+.|+++|++.
T Consensus 252 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 300 (367)
T 3euc_A 252 RP--PYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVT 300 (367)
T ss_dssp CC--SSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred CC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 32 345666666666555544 56677888888999999999887764
No 47
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.94 E-value=1.5e-25 Score=201.52 Aligned_cols=213 Identities=17% Similarity=0.108 Sum_probs=159.5
Q ss_pred HHHHHHHHHhhcC-------CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDK-------ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~-------~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
..++++.++++++ .+++++++||++|+. ++..++++||+|++++|.|+++. ..++..|.+++.++.+
T Consensus 98 ~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~ 173 (427)
T 3dyd_A 98 FLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYK----TLAESMGIEVKLYNLLP 173 (427)
T ss_dssp CHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEEEG
T ss_pred cHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEeccc
Confidence 4566666666665 336666777789996 66667889999999999999886 5556778888887753
Q ss_pred ------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc-----CccCCC---
Q 022194 128 ------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELG--- 190 (301)
Q Consensus 128 ------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~--- 190 (301)
|++++++.+++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+...+. .....+
T Consensus 174 ~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~ 253 (427)
T 3dyd_A 174 EKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDV 253 (427)
T ss_dssp GGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSC
T ss_pred ccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCC
Confidence 899999999988999999999999999998 999999999999999999999864432 111122
Q ss_pred CcEEEecccccccCCCCceeeEEEEcc------hhHHHHHHHhhhhcCCCCCHHhHHHHHcccc-----cHHHHHHHHHH
Q 022194 191 ADIVMHSATKFIAGHSDVMAGVLAVKG------ERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQD 259 (301)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~ 259 (301)
..+++.|+||.| +.+|+|.|++++++ +.+.+.+...... ..+.++..+.++...++ .+.+.++++.+
T Consensus 254 ~vi~~~S~sK~~-~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~ 331 (427)
T 3dyd_A 254 PILSCGGLAKRW-LVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKS 331 (427)
T ss_dssp CEEEEEESTTTS-SCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred cEEEEeeccccC-CCcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 348889999998 55788999999875 3455544443322 24455555555544443 35667788888
Q ss_pred HHHHHHHHHHhCCCcc
Q 022194 260 NAQKIAEFLASHPRVK 275 (301)
Q Consensus 260 ~~~~l~~~l~~~~~v~ 275 (301)
+++.+.+.|+++|++.
T Consensus 332 ~~~~l~~~L~~~~g~~ 347 (427)
T 3dyd_A 332 NADLCYGALAAIPGLR 347 (427)
T ss_dssp HHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHhcCCCce
Confidence 8999999999887764
No 48
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.94 E-value=3.8e-25 Score=195.87 Aligned_cols=246 Identities=17% Similarity=0.155 Sum_probs=175.9
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHh
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTH 88 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~ 88 (301)
.+++|+++...++ .+|.+......... . ...|... ....++++.++++++.+ +++++++|++++. ++..
T Consensus 26 ~~i~l~~~~~~~~--~~~~v~~a~~~~~~--~--~~~y~~~--~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~ 97 (381)
T 1v2d_A 26 GAVNLGQGFPSNP--PPPFLLEAVRRALG--R--QDQYAPP--AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQS 97 (381)
T ss_dssp TCEECCCCSCSSC--CCHHHHHHHHHHTT--T--SCSCCCT--TCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHH
T ss_pred CeEEecCCCCCCC--CCHHHHHHHHHHHH--H--hcCCCCC--CCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHH
Confidence 4788884433344 34444433222111 1 2234332 12578888888888865 5666677789986 5566
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--------CHHHHHhhcCCCceEEEEeCCCCCcccccc---
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD--- 157 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~--- 157 (301)
++++||+|++++|.|+++. ..++..|.+++.++.+ |++++++++++++++|++++|+||||.+.+
T Consensus 98 ~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~ 173 (381)
T 1v2d_A 98 LVGPGDEVVVLEPFFDVYL----PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERE 173 (381)
T ss_dssp HCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred hCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHH
Confidence 7889999999999999987 3455678888887753 789999999888999999999999999975
Q ss_pred HHHHHHHHHHcCCEEEEeCCcCCcccc----Ccc--CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc
Q 022194 158 IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 231 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~~~~~~~----~~~--~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~ 231 (301)
+++|+++|+++|+++|+||+|+.+.+. ... ..+.|+++.|+||++ |++|++.|++++++ .+.+.+.......
T Consensus 174 l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~ 251 (381)
T 1v2d_A 174 LEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRL-EATGYRVGWIVGPK-EFMPRLAGMRQWT 251 (381)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHT-TCGGGCCEEEECCT-TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhc-CCcccceEEEEeCH-HHHHHHHHHHhhc
Confidence 899999999999999999999865432 111 347899999999999 55678899999875 4556555544444
Q ss_pred CCCCCHHhHHHHHcccc------cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 232 GSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 232 ~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..+.++..+.++...++ .+.+.++++.++++++.+.|++.
T Consensus 252 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 252 SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM 297 (381)
T ss_dssp TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 45555555544444333 34566777888888999999874
No 49
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.94 E-value=1.2e-24 Score=195.62 Aligned_cols=221 Identities=18% Similarity=0.220 Sum_probs=164.1
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC----------ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhh
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD----------RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR 112 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~----------~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~ 112 (301)
..|++. |.+. ++++.+++++.+|.+ +.+++++| ++++. ++..++++||+|++++|.|+++. .
T Consensus 72 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~ 147 (425)
T 2r2n_A 72 LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL----Q 147 (425)
T ss_dssp TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH----H
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----H
Confidence 356655 7766 888888888877743 35666555 68886 66667899999999999999986 4
Q ss_pred hcccCCcEEEEecCC----CHHHHHhhcC------------CCceEEEE-eCCCCCcccccc---HHHHHHHHHHcCCEE
Q 022194 113 VTPKTGVVVKRVNTC----DLDEVASAIG------------PWTKLVWV-ESPTNPRQQICD---IRKIAEMAHAHGALL 172 (301)
Q Consensus 113 ~~~~~g~~~~~~~~~----d~~~l~~~l~------------~~~~~v~i-~~~~np~G~~~~---l~~l~~l~~~~~~~l 172 (301)
.++..|.+++.++.+ |+++++++++ +++++|++ ++|+||||.+.+ +++|+++|++||+++
T Consensus 148 ~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~l 227 (425)
T 2r2n_A 148 SLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227 (425)
T ss_dssp HHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 556778888888763 7889998886 35788876 689999999987 558999999999999
Q ss_pred EEeCCcCCcccc-----Cc---cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHH
Q 022194 173 LVDNSIMSPVLS-----RP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (301)
Q Consensus 173 i~D~~~~~~~~~-----~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
|+||+|+...+. .. ...+.++++.|+||++ + +|+|.|++++++ .+.+.+.........+.++..+.++.
T Consensus 228 i~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~-~-~GlRiG~~~~~~-~l~~~l~~~~~~~~~~~~~~~q~a~~ 304 (425)
T 2r2n_A 228 IEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKII-S-SGLRIGFLTGPK-PLIERVILHIQVSTLHPSTFNQLMIS 304 (425)
T ss_dssp EEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTT-C-STTCCEEEEEEH-HHHHHHHHHHHTTTCSSCHHHHHHHH
T ss_pred EEECCcccccCCCCCCCCccccCCCCCEEEEccchhhc-c-CccceEEEecCH-HHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999743321 11 1235679999999999 5 689999999885 46666665555555666776666655
Q ss_pred ccccc---------HHHHHHHHHHHHHHHHHHHHh-CCCc
Q 022194 245 RGVKT---------MALRVEKQQDNAQKIAEFLAS-HPRV 274 (301)
Q Consensus 245 ~~l~~---------~~~~~~~~~~~~~~l~~~l~~-~~~v 274 (301)
..++. +.+.++.+.++++.+.+.|++ .+++
T Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 344 (425)
T 2r2n_A 305 QLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGL 344 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 55443 344556677778888888877 4554
No 50
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.94 E-value=8.5e-25 Score=194.72 Aligned_cols=254 Identities=13% Similarity=0.157 Sum_probs=176.1
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCch-HHHHHHHHHhhcC--C--CceEEecchHHHHH-
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPT-RDALESLLAKLDK--A--DRALCFTSGMAALA- 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~-~~~l~~~l~~~~~--~--~~~i~~~sG~~ai~- 84 (301)
..+++|++ ++ .+...+|.+......... .....|... .+. ++++.+++++.+| . ++++++++|++|+.
T Consensus 31 ~~~i~l~~-~~-~~~~~~~~v~~a~~~~~~---~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~ 104 (399)
T 1c7n_A 31 NEVVPLSV-AD-MEFKNPPELIEGLKKYLD---ETVLGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFN 104 (399)
T ss_dssp TTCCCCCS-SS-CSSCCCHHHHHHHHHHHH---HCCCSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred CCceeeee-cC-CCCCCCHHHHHHHHHHHh---cCCCCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHH
Confidence 35778873 33 233344544433211110 112344432 333 6666666666666 2 35556666679986
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--------CCHHHHHhhcC-CCceEEEEeCCCCCcccc
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~l~-~~~~~v~i~~~~np~G~~ 155 (301)
++..++++||+|+++.|.|+++. ..+...|.+++.++. .|+++++++++ .++++|++++|+||||.+
T Consensus 105 ~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~ 180 (399)
T 1c7n_A 105 AVREFTKPGDGVIIITPVYYPFF----MAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRV 180 (399)
T ss_dssp HHHHHCCTTCEEEECSSCCTHHH----HHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBC
T ss_pred HHHHhcCCCCEEEEcCCCcHhHH----HHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcC
Confidence 56667889999999999999987 444567888888775 37899999998 689999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCcCCcccc-----CccC-----CCCcEEEecccccccCCCCceeeEEEEcchhHHH
Q 022194 156 CD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (301)
Q Consensus 156 ~~---l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~-----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~ 222 (301)
.+ +++|+++|+++|+++|+||+|+...+. .... .+.++++.|+||++ |++|++.|+++++++.+.+
T Consensus 181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~ 259 (399)
T 1c7n_A 181 WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTF-NIAGMGMSNIIIKNPDIRE 259 (399)
T ss_dssp CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhc-cccchheEEEEECCHHHHH
Confidence 88 999999999999999999999865432 1111 25679999999999 5567889999998666767
Q ss_pred HHHHhhhhcCC-CCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 022194 223 ELYFLQNAEGS-GLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS-HPRVK 275 (301)
Q Consensus 223 ~~~~~~~~~~~-~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~-~~~v~ 275 (301)
.+.......+. +.++..++++...++ .+.+.++++.++++++.+.|++ +|++.
T Consensus 260 ~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 318 (399)
T 1c7n_A 260 RFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIK 318 (399)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSB
T ss_pred HHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCe
Confidence 66655554432 456655555444432 3456667788888889999987 66653
No 51
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.94 E-value=3.1e-25 Score=199.03 Aligned_cols=219 Identities=21% Similarity=0.260 Sum_probs=172.1
Q ss_pred CCchHHHHHHHHHhhcCCCceEE---ecchHHHHH-HHHhccCCCCeEEEcC-CCCccHHHHHh------hhcccCCcEE
Q 022194 53 GNPTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLLS------RVTPKTGVVV 121 (301)
Q Consensus 53 g~~~~~~l~~~l~~~~~~~~~i~---~~sG~~ai~-~~~~~~~~g~~Vlv~~-~~y~~~~~~~~------~~~~~~g~~~ 121 (301)
+.+.++++++.+++++|.+..++ ++||++|+. ++.+++++||+|++++ +.|..+...+. ..++..|+++
T Consensus 63 ~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~ 142 (431)
T 3ht4_A 63 DDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY 142 (431)
T ss_dssp SCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE
T ss_pred ChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE
Confidence 34558999999999999986665 789999986 6677899999999998 89998865432 4556789999
Q ss_pred EEecCC-----CHHHHHhhcCCCceEEEEeC-CCCCccc---cccHHHHHHHHHH--cCCEEEEeCCcCCccc-cCccCC
Q 022194 122 KRVNTC-----DLDEVASAIGPWTKLVWVES-PTNPRQQ---ICDIRKIAEMAHA--HGALLLVDNSIMSPVL-SRPLEL 189 (301)
Q Consensus 122 ~~~~~~-----d~~~l~~~l~~~~~~v~i~~-~~np~G~---~~~l~~l~~l~~~--~~~~li~D~~~~~~~~-~~~~~~ 189 (301)
+.++.+ |++++++++++++++|++++ |+||+|. ..++++|+++|++ +|+++|+|++|+.+.. ..+...
T Consensus 143 ~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~ 222 (431)
T 3ht4_A 143 NAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHV 222 (431)
T ss_dssp EECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGT
T ss_pred EEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcccc
Confidence 999974 89999999999999999995 6666554 4679999999999 9999999999998874 466777
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcC--C--CCCHHhHHHHHcccccHHHHHHHHHHHHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG--S--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIA 265 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 265 (301)
++|++++|++|+++|..+..+|+++++ +.+.+.+.......+ . +.+....+.+.++++.+..++++..++++++.
T Consensus 223 g~Di~~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l~ 301 (431)
T 3ht4_A 223 GADLMAGSLIKNPGGGIVKTGGYIVGK-EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTA 301 (431)
T ss_dssp TCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEcCccccCCCCCCCceEEEEec-HHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHHH
Confidence 899999999999977444456999887 455565554333322 1 12222245566777777888899999999999
Q ss_pred HHHHhCC
Q 022194 266 EFLASHP 272 (301)
Q Consensus 266 ~~l~~~~ 272 (301)
+.|++++
T Consensus 302 ~~L~~~g 308 (431)
T 3ht4_A 302 AFLEKLG 308 (431)
T ss_dssp HHHHHHT
T ss_pred HHHHhCc
Confidence 9999865
No 52
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.94 E-value=2.8e-25 Score=199.76 Aligned_cols=252 Identities=19% Similarity=0.205 Sum_probs=173.0
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----C-ceEEecchHHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----D-RALCFTSGMAALA 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~-~~i~~~sG~~ai~ 84 (301)
.+++|+.....+| .+|.+.................|... |.+. ++++.+++.+.+|. + +++++++|++++.
T Consensus 38 ~~i~l~~~~~~~~--~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~ 115 (429)
T 1yiz_A 38 KPLNLGQGFPDYH--APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALY 115 (429)
T ss_dssp CCEECCSSSCSSC--CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred CEEEecCCCCCCC--CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHH
Confidence 5788884333345 34544433211111000022345544 4444 67777777766663 3 4555555579986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC---------------CCHHHHHhhcCCCceEEEEeCC
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------------CDLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~---------------~d~~~l~~~l~~~~~~v~i~~~ 148 (301)
++..++++||+|+++.|.|+++.. .++..|.+++.++. .|++++++++++++++|++++|
T Consensus 116 ~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 191 (429)
T 1yiz_A 116 ATIQGHVDEGDEVIIIEPFFDCYEP----MVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTP 191 (429)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCC
Confidence 556678899999999999999874 34456777777764 3689999999888999999999
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc-----Cc--c--CCCCcEEEecccccccCCCCceeeEEEEc
Q 022194 149 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP--L--ELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (301)
Q Consensus 149 ~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~--~--~~~~di~~~S~sK~~~g~~g~~~g~~~~~ 216 (301)
+||||.+.+ +++|+++|++||+++|+||+|+...+. .. . ..++|+++.|+||++ |++|++.|+++++
T Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~ 270 (429)
T 1yiz_A 192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTF-SLTGWKIGWAYGP 270 (429)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEEESC
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhcc-CCCCcceEEEEeC
Confidence 999999985 999999999999999999999854331 11 1 346799999999999 5668899999987
Q ss_pred chhHHHHHHHhhhhcCCCCCHHhHHHHHccc-----------ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 217 GERLAKELYFLQNAEGSGLAPFDCWICLRGV-----------KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+ .+.+.+.........+.++..+.++...+ +.+.+.++++.++++.+.+.|+++
T Consensus 271 ~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 271 E-ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp H-HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4 56666655554444555555544443332 235666677788888888888765
No 53
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.94 E-value=4.3e-26 Score=200.74 Aligned_cols=244 Identities=13% Similarity=0.191 Sum_probs=176.9
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~ 87 (301)
..+++|++..++++ .+|.+......... ....|.. +...++++.++++++.+ ++++++||++++. ++.
T Consensus 30 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~~----~~~~y~~---~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 30 KEVIKLASNENPFG--TPPKAIECLRQNAN----KAHLYPD---DSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp SCCEECSSCCCTTC--SCHHHHHHHHHHGG----GTTSCCC---TTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred CceEEecCCCCCCC--CCHHHHHHHHHHHH----hhccCCC---CChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 46789985545566 34444433222111 1223332 22368899999999854 5666666789986 566
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-----CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~ 162 (301)
.++++||+|+++.|.|+++. ..++..|.+++.++. .|++++++++++++++|++++|+||||.+.++++|.
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~ 176 (365)
T 3get_A 101 SKLNSKNAFLQAGVTFAMYE----IYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEAT 176 (365)
T ss_dssp HHCCTTCEEEECSSCCTHHH----HHHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhCCCCEEEEeCCChHHHH----HHHHHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHH
Confidence 67899999999999999886 455567889999986 367899999999999999999999999999988888
Q ss_pred HHHH--HcCCEEEEeCCcCCccc-------cCc----cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh
Q 022194 163 EMAH--AHGALLLVDNSIMSPVL-------SRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (301)
Q Consensus 163 ~l~~--~~~~~li~D~~~~~~~~-------~~~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~ 229 (301)
++++ ++|+++|+|++|+.+.+ ... ...+.++++.|+||++ |++|++.|+++++ +.+.+.+.....
T Consensus 177 ~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~ 254 (365)
T 3get_A 177 EFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLY-GLGGLRIGYGIAN-ANIISAFYKLRA 254 (365)
T ss_dssp HHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTT-SCTTTCCEEEEEC-HHHHHHHHHHSC
T ss_pred HHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHh-cCcchheEEEEcC-HHHHHHHHHhcC
Confidence 8887 67999999999984431 111 1236789999999999 5667889999985 556665554433
Q ss_pred hcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 230 AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
. ++.++..++++...++. +.+.++++.++++++.+.|+++
T Consensus 255 ~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 297 (365)
T 3get_A 255 P--FNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH 297 (365)
T ss_dssp T--TCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred C--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 34666666555555443 5677788888889999999876
No 54
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.94 E-value=7.4e-25 Score=194.67 Aligned_cols=248 Identities=18% Similarity=0.180 Sum_probs=173.4
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~ 84 (301)
..+++|+++...++. +|.+........ ......|... |.+. ++++.+++.+.+|. ++++++++|++++.
T Consensus 31 ~~~i~l~~g~~~~~~--~~~v~~a~~~~~---~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~ 105 (391)
T 3h14_A 31 RRIIHMEVGQPGTGA--PRGAVEALAKSL---ETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFL 105 (391)
T ss_dssp CCCEECCCSSCSSCS--CHHHHHHHHHHH---C----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCeEEccCCCCCCCC--CHHHHHHHHHHH---hcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHH
Confidence 468899854444443 454433321111 1123455544 4444 77777777766552 35666677789986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
++..++++||+|+++.|.|+++. ..++..|.+++.++.+ |+++++++ ++++|++++|+||||.+.
T Consensus 106 ~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~ 178 (391)
T 3h14_A 106 LAFTALFDSGDRVGIGAPGYPSYR----QILRALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTML 178 (391)
T ss_dssp HHHHHHCCTTCEEEEEESCCHHHH----HHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCC
T ss_pred HHHHHhcCCCCEEEEcCCCCccHH----HHHHHcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccC
Confidence 66677899999999999999887 4555778898888865 77888776 789999999999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCccccC----ccC-CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLSR----PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~ 228 (301)
+ +++|+++|+++|+++|+||+|+...+.. ... .+.++++.|+||++ |++|++.|++++++ .+.+.+....
T Consensus 179 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~-~~~~~~~~~~ 256 (391)
T 3h14_A 179 DHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYF-SMTGWRVGWMVVPE-DQVRVVERIA 256 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTT-CCTTSCCEEEECCG-GGHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhcc-CCccceeEEEEeCH-HHHHHHHHHH
Confidence 7 8889999999999999999998654321 112 35679999999999 66788999999875 4666666666
Q ss_pred hhcCCCCCHHhHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHhCC
Q 022194 229 NAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
.....+.++..+.++...+ +.+.+.++++.++++.+.+.|++++
T Consensus 257 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 303 (391)
T 3h14_A 257 QNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAG 303 (391)
T ss_dssp HHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6556666666655554433 3456677788888888999888753
No 55
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.94 E-value=3.5e-25 Score=192.71 Aligned_cols=244 Identities=14% Similarity=0.135 Sum_probs=174.0
Q ss_pred CCccceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecch-HHHHH
Q 022194 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA 84 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~ 84 (301)
.+....+++|++..+++|. +|.+......... ....| ..+...++++.++++++.+ +.+++++| ++++.
T Consensus 12 ~~~~~~~i~l~~n~~~~~~--~~~v~~a~~~~~~----~~~~y---~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~ 82 (337)
T 3p1t_A 12 VRAAAQAVCLAFNENPEAV--EPRVQAAIAAAAA----RINRY---PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFD 82 (337)
T ss_dssp --CCCCCEECSSCCCCSCC--CHHHHHHHHHHGG----GTTSC---CTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHH
T ss_pred ccCCCCceEeeCCCCCCCC--CHHHHHHHHHhhh----hhccC---CCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHH
Confidence 3444578999955577873 4555443222111 11223 3456889999999999876 46666666 58887
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~ 159 (301)
++...+ +||+|++++|.|+++. ..++..|.+++.++.+ |+++++++ .+++++++++|+||||.+.|++
T Consensus 83 ~~~~~~-~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~ 155 (337)
T 3p1t_A 83 RISAEF-SSMRFVTAWPGFDGYR----ARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAG 155 (337)
T ss_dssp HHHHHS-TTSEEEEESSSCSHHH----HHHTTSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHH
T ss_pred HHHHhc-CCCeEEEeCCCcHHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHH
Confidence 666656 9999999999999986 5567789999998854 78888876 4679999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCcCCcccc---CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCC
Q 022194 160 KIAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (301)
Q Consensus 160 ~l~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
+|.++|+++++ +|+||+|...... .....+.++++.|+||++ |++|++.|++++++ .+.+.+.... ...+.+
T Consensus 156 ~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~~-~~~~~l~~~~--~~~~~~ 230 (337)
T 3p1t_A 156 ELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSY-GLAGLRLGALFGPS-ELIAAMKRKQ--WFCNVG 230 (337)
T ss_dssp HHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTT-CCTTTCCEEEECCH-HHHHHHHTTS--CTTCSC
T ss_pred HHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhc-cCcchheEEEEeCH-HHHHHHHhhc--CCCCCC
Confidence 99999999997 5669999743221 122335789999999999 66788999999875 4555443332 234455
Q ss_pred HHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 237 PFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 237 ~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.....++...++. +.+.++++.++++++.+.|+++
T Consensus 231 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 231 TLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5555555444443 4566677777888899999876
No 56
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.94 E-value=7.8e-25 Score=194.45 Aligned_cols=253 Identities=16% Similarity=0.215 Sum_probs=172.5
Q ss_pred ceeeecCCCCCC-CCccccCeeecceeecCCCCCCCCccccCCCCc-hHHHHHHHHHhhcC--C--CceEEecchHHHHH
Q 022194 11 TLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRSGNP-TRDALESLLAKLDK--A--DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~-~~~~l~~~l~~~~~--~--~~~i~~~sG~~ai~ 84 (301)
..+++|+ .+++ ++ .+|.+......... .....|...... .++++.+++.+.+| . ++++++++|++++.
T Consensus 28 ~~~i~l~-~~~~~~~--~~~~v~~a~~~~~~---~~~~~y~~~~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~ 101 (390)
T 1d2f_A 28 ADLLPFT-ISDMDFA--TAPCIIEALNQRLM---HGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVS 101 (390)
T ss_dssp --CEECC-SSSCSSC--CCHHHHHHHHHHHT---TCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHH
T ss_pred CCeeEee-ecCCCCC--CCHHHHHHHHHHHh---CCCCCCCCCChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHH
Confidence 3678887 3443 44 44544433222111 122344433233 45666666666656 2 34555566678986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--------CCHHHHHhhcCC-CceEEEEeCCCCCccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGP-WTKLVWVESPTNPRQQ 154 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~l~~-~~~~v~i~~~~np~G~ 154 (301)
++..++++||+|+++.|.|+++.. .++..|.+++.++. .|++++++++++ ++++|++++|+||||.
T Consensus 102 ~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~ 177 (390)
T 1d2f_A 102 ELIRQWSETGEGVVIHTPAYDAFYK----AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGK 177 (390)
T ss_dssp HHHHHSSCTTCEEEEEESCCHHHHH----HHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCC
T ss_pred HHHHHhcCCCCEEEEcCCCcHHHHH----HHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCc
Confidence 566678899999999999999874 44566788887775 378999999985 7899999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCCcCCcccc-----CccCC--CC-cEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 155 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLEL--GA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 155 ~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~~--~~-di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
+.+ +++|+++|+++|+++|+||+|+.+.+. ..... +. |. +.|+||++ |++|++.|+++++++.+.+.
T Consensus 178 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~-~~~G~r~G~~~~~~~~~~~~ 255 (390)
T 1d2f_A 178 VWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSF-NIPALTGAYGIIENSSSRDA 255 (390)
T ss_dssp CCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHH-TCGGGCCEEEEECSHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhh-cccChhheEEEECCHHHHHH
Confidence 976 899999999999999999999865432 11112 11 66 99999999 55788999999876667666
Q ss_pred HHHhhh-hcC-CCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 022194 224 LYFLQN-AEG-SGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS-HPRVK 275 (301)
Q Consensus 224 ~~~~~~-~~~-~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~-~~~v~ 275 (301)
+..... ... ++.++..++++...++ .+.+.++++.++++.+.+.|++ +|++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 314 (390)
T 1d2f_A 256 YLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELN 314 (390)
T ss_dssp HHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 655544 333 2556665555444433 3456667788888889999987 66553
No 57
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.94 E-value=3.5e-25 Score=197.84 Aligned_cols=251 Identities=18% Similarity=0.185 Sum_probs=174.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC-----CceEEecchHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA-----DRALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~-----~~~i~~~sG~~ai 83 (301)
..+++|+.....++ .+|.+......... ......|... |.+. ++++.+++.+.++. ++++++++|++++
T Consensus 23 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~~--~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~ 98 (410)
T 3e2y_A 23 PSVVNLGQGFPDIS--PPSYVKEELSKAAF--IDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSL 98 (410)
T ss_dssp TTSEECSSCCCCSC--CCHHHHHHHHHHHT--CGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred CCeEEecCCCCCCC--CCHHHHHHHHHHHh--CccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 46788884333333 33444333211111 1112245543 4443 66666766665542 3455555567998
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----------------CHHHHHhhcCCCceEEEEe
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------------DLDEVASAIGPWTKLVWVE 146 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----------------d~~~l~~~l~~~~~~v~i~ 146 (301)
. ++..++++||+|+++.|.|+++. ..++..|.+++.++.+ |++++++++++++++|+++
T Consensus 99 ~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~ 174 (410)
T 3e2y_A 99 FNSIQGLVDPGDEVIIMVPFYDCYE----PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILN 174 (410)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEe
Confidence 6 66667899999999999999987 4455677888777653 7899999999899999999
Q ss_pred CCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCccccC-----c----cCCCCcEEEecccccccCCCCceeeEEE
Q 022194 147 SPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSR-----P----LELGADIVMHSATKFIAGHSDVMAGVLA 214 (301)
Q Consensus 147 ~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~----~~~~~di~~~S~sK~~~g~~g~~~g~~~ 214 (301)
+|+||||.+. ++++|+++|++||+++|+||+|+...+.. . ...+.++++.|+||++ |++|++.|+++
T Consensus 175 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~ 253 (410)
T 3e2y_A 175 TPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTF-SVTGWKLGWSI 253 (410)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHS-SCGGGCCEEEE
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhc-CCCCceEEEEE
Confidence 9999999995 69999999999999999999997544321 1 1224569999999999 55678999999
Q ss_pred EcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc-----------ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----------KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+++ .+.+.+.........+.++..+.++...+ +.+.+..+++.++++.+.+.|+++
T Consensus 254 ~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 320 (410)
T 3e2y_A 254 GPA-HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV 320 (410)
T ss_dssp CCH-HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ECH-HHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 875 45565555555555556666655544433 235677788888899999999876
No 58
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.94 E-value=7.5e-25 Score=192.39 Aligned_cols=245 Identities=15% Similarity=0.167 Sum_probs=176.6
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~~~~ 88 (301)
..+++|+++.++++. +|.+........+ ....| ..+...+++++++++++.+ ++++++||++++.++..
T Consensus 26 ~~~idl~~~~~~~~~--~~~v~~a~~~~~~----~~~~y---~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~ 96 (361)
T 3ftb_A 26 RELLDYSSNINPLGI--PKSFLNNIDEGIK----NLGVY---PDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSIS 96 (361)
T ss_dssp --CEETTCCCCTTCS--CHHHHTTHHHHHH----GGGSC---CCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHT
T ss_pred CCEEEecCCCCCCCC--CHHHHHHHHHHHH----HhcCC---CCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHH
Confidence 568999855566663 3444433211111 11223 2334688899999998854 45555666899986666
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHH
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRK 160 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~ 160 (301)
.+ |+|+++.|.|+++. ..++..|.+++.++.+ +++++++++++ +++|++++|+||||.+.+ +++
T Consensus 97 ~~---d~vi~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~ 168 (361)
T 3ftb_A 97 LF---EKILIIVPSYAEYE----INAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIH 168 (361)
T ss_dssp TC---SEEEEEESCCTHHH----HHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHH
T ss_pred Hc---CcEEEecCChHHHH----HHHHHcCCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 66 89999999999987 4455678899888864 56899999988 999999999999999975 777
Q ss_pred HHHHHHHcCCEEEEeCCcCCcccc---C----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCC
Q 022194 161 IAEMAHAHGALLLVDNSIMSPVLS---R----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~~~~~~~---~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
|+++|++||+++|+||+|+..... . ....+.++++.|+||.+ |++|++.|+++..++.+.+.+..... .+
T Consensus 169 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~g~~~~~~~~~~~~~~~~~~--~~ 245 (361)
T 3ftb_A 169 VLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFF-AMPGIRFGYGITNNKEIAAKIKAKQN--PW 245 (361)
T ss_dssp HHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTT-SCGGGCCEEEEESCHHHHHHHHTTSC--TT
T ss_pred HHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhc-CCCCcceeEEEeCCHHHHHHHHhhCC--CC
Confidence 888889999999999999754442 1 12234568999999999 55678899998556667665554333 34
Q ss_pred CCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 234 GLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 234 ~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
+.++..++++...++. +.++++++.++++++.+.|++++++.
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 246 NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIK 290 (361)
T ss_dssp CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 6677777777666654 45667778888899999999888765
No 59
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=1.3e-24 Score=194.40 Aligned_cols=249 Identities=18% Similarity=0.234 Sum_probs=175.0
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~ 84 (301)
..+++|++....++ .+|.+.... .... .....|... |.+. ++++.+++.+.+|. +++++++||++|+.
T Consensus 43 ~~~i~l~~~~~~~~--~~~~v~~a~-~~l~---~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~ 116 (409)
T 2gb3_A 43 VRIHHLNIGQPDLK--TPEVFFERI-YENK---PEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAIL 116 (409)
T ss_dssp CEEEECSSCCCCSC--CCTHHHHHH-HHTC---CSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHH
T ss_pred CCEEeccCCCCCCC--CCHHHHHHH-HHHh---cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHH
Confidence 36889983333344 345444443 2211 122345443 4433 66666666665542 35666677789986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCC------HHHHHhhcCCCceEEEEeCCCCCccccc-
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD------LDEVASAIGPWTKLVWVESPTNPRQQIC- 156 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d------~~~l~~~l~~~~~~v~i~~~~np~G~~~- 156 (301)
++..++++||+|++++|.|+++.. .++..|.+++.++.++ ++++++++++++++|++++|+||||.+.
T Consensus 117 ~~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~ 192 (409)
T 2gb3_A 117 FSFAVIANPGDEILVLEPFYANYNA----FAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYG 192 (409)
T ss_dssp HHHHHHCCTTCEEEEEESCCTHHHH----HHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHH----HHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcC
Confidence 566678899999999999998873 4456788888888652 6888888888899999999999999986
Q ss_pred --cHHHHHHHHHHcCCEEEEeCCcCCcccc----Ccc-C-CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh
Q 022194 157 --DIRKIAEMAHAHGALLLVDNSIMSPVLS----RPL-E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (301)
Q Consensus 157 --~l~~l~~l~~~~~~~li~D~~~~~~~~~----~~~-~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~ 228 (301)
++++|+++|+++|+++|+||+|+.+.+. ... . .+.|+++.|+||++ |++|++.|+++++++.+.+.+....
T Consensus 193 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~l~~~l~~~~ 271 (409)
T 2gb3_A 193 KDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKF-SACGARVGCLITRNEELISHAMKLA 271 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTT-TCGGGCCEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhcc-CCccceEEEEEECcHHHHHHHHHHH
Confidence 4899999999999999999999865542 111 1 35799999999999 5577889999998745666665554
Q ss_pred hhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 229 NAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.... +.++..+.++...++ .+.+.++++.++++.+.+.|+++
T Consensus 272 ~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 317 (409)
T 2gb3_A 272 QGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH 317 (409)
T ss_dssp HHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4443 556665555544443 24556677888888899988875
No 60
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.93 E-value=2.9e-25 Score=196.92 Aligned_cols=249 Identities=17% Similarity=0.195 Sum_probs=174.2
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----C-ceEEecchHHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----D-RALCFTSGMAALA 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~-~~i~~~sG~~ai~ 84 (301)
.+++|+.....++ .+|.+......... .....|... |.+. ++++.+++.+.+|. + +++++++|++++.
T Consensus 31 ~~i~l~~~~~~~~--~~~~v~~a~~~~~~---~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~ 105 (386)
T 1u08_A 31 QAINLSQGFPDFD--GPRYLQERLAHHVA---QGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALY 105 (386)
T ss_dssp TCEECCCSSCSSC--CCHHHHHHHHHHHH---TTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHH
T ss_pred CeEEecCCCCCCC--CCHHHHHHHHHHHH---hhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHH
Confidence 4788873332344 34444433211111 112345543 4444 67777777776663 3 4556666679986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCcccccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~ 157 (301)
++..++++||+|++++|.|+++. ..++..|.+++.++.+ |++++++++++++++|++++|+||||.+.+
T Consensus 106 ~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 181 (386)
T 1u08_A 106 AAITALVRNGDEVICFDPSYDSYA----PAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQ 181 (386)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCC
Confidence 55667889999999999999987 4455678888888752 789999999888999999999999999975
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCcCCcccc-----Ccc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHH
Q 022194 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (301)
Q Consensus 158 ---l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~ 225 (301)
+++|+++|+++|+++|+||+|+...+. ... ..+.|+++.|+||++ |++|++.|++++++ .+.+.+.
T Consensus 182 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~l~ 259 (386)
T 1u08_A 182 QADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTY-HMTGWKVGYCVAPA-PISAEIR 259 (386)
T ss_dssp HHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHT-TCGGGCCEEEECCH-HHHHHHH
T ss_pred HHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhc-CCcccceEEEEcCH-HHHHHHH
Confidence 788999999999999999999864331 111 246899999999999 56678899999874 5666665
Q ss_pred HhhhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 226 FLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
........+.++..+.++...++ .+.+.++++.++++.+.+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T 1u08_A 260 KVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES 309 (386)
T ss_dssp HHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 55544445555555444444433 24566677788888888888765
No 61
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.93 E-value=6.7e-26 Score=200.35 Aligned_cols=249 Identities=16% Similarity=0.125 Sum_probs=171.0
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc----CCC-----ceEEecchHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD----KAD-----RALCFTSGMA 81 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~----~~~-----~~i~~~sG~~ 81 (301)
..+++|+++...+| .+|.+......... ......|... ....++++.+++++ |.+ +++++++|++
T Consensus 25 ~~~idl~~~~~~~~--~~~~v~~a~~~~~~--~~~~~~y~~~--~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~ 98 (376)
T 2dou_A 25 VGLIDLSIGSTDLP--PPEAPLKALAEALN--DPTTYGYCLK--SCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98 (376)
T ss_dssp CCCEECSSCCCCCC--CCHHHHHHHHHHTT--CGGGSSCCCH--HHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred CCEEeccCCCCCCC--CCHHHHHHHHHHHh--CCCcCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence 45889985444455 34544433222111 1112233321 12455555555544 764 4455555578
Q ss_pred HHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-----CCHHHHHhhcCCCceEEEEeCCCCCcccc
Q 022194 82 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 82 ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~v~i~~~~np~G~~ 155 (301)
++. ++..++++||+|++++|.|+++. ..++..|.+++.++. .|++++++++.+++++|++++|+||||.+
T Consensus 99 a~~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 174 (376)
T 2dou_A 99 GLAHLLLALTEPEDLLLLPEVAYPSYF----GAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAV 174 (376)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCHHHH----HHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCcHhHH----HHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCcc
Confidence 985 66667889999999999999987 444567888888875 26788888887778999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCcCCcccc----CccC----CCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 156 CD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 156 ~~---l~~l~~l~~~~~~~li~D~~~~~~~~~----~~~~----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
.+ +++|+++|+++|+++|+||+|+.+.+. .... .+.++++.|+||++ |.+|++.|+++++ +.+.+.+
T Consensus 175 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l 252 (376)
T 2dou_A 175 ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSY-NLAGFRLGFALGS-EEALARL 252 (376)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHH-TCGGGCCEEEEEC-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhc-CChhheeEEEecC-HHHHHHH
Confidence 76 788999999999999999999865432 1121 25689999999999 5567889999876 4566666
Q ss_pred HHhhhhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 225 YFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.......+.+.++..+.++...++. +.+.++++.++++.+.+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (376)
T 2dou_A 253 ERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV 303 (376)
T ss_dssp HHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6555555555566666665555543 4556677788888899988875
No 62
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.93 E-value=1.4e-25 Score=200.40 Aligned_cols=251 Identities=14% Similarity=0.073 Sum_probs=173.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCCC-----ceEEecchHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKAD-----RALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~-----~~i~~~sG~~ai 83 (301)
..+++|+++...+| .+|.+......... ......|... |.+. ++++.+++++.+|.+ +++++++|++++
T Consensus 47 ~~~idl~~g~~~~~--~~~~v~~a~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al 122 (404)
T 2o1b_A 47 LPLINMAVGIPDGP--TPQGIIDHFQKALT--IPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGL 122 (404)
T ss_dssp SCCEECCCCSCSSC--CCHHHHHHHHHHTT--CHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHH
T ss_pred CCEEecCCcCCCCC--CCHHHHHHHHHHHh--CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHH
Confidence 45789985444455 34444433211111 1112235543 4443 666666666666753 344555557888
Q ss_pred H-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCccccc
Q 022194 84 A-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 84 ~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~ 156 (301)
. ++..++++||+|+++.|.|+++.. .++..|.+++.++.+ |++++++++++++++|++++|+||||.+.
T Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 198 (404)
T 2o1b_A 123 VAVPTCVINPGDYVLLPDPGYTDYLA----GVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTA 198 (404)
T ss_dssp HHHHHHHCCTTCEEEEEESCCSSHHH----HHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCchhHHH----HHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccC
Confidence 6 566678899999999999999974 445667888887753 67888888877789999999999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCcccc----CccCC----CCcEEEecccccccCCCCceeeEEEEcchhHHHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~----~~~~~----~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~ 225 (301)
+ +++|+++|+++|+++|+||+|+.+.+. ..... +.++++.|+||++ |.+|++.|+++++ +.+.+.+.
T Consensus 199 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~l~ 276 (404)
T 2o1b_A 199 TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGY-NMSGFRVGFAVGN-KDMIQALK 276 (404)
T ss_dssp CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTT-TCGGGCCEEEEEC-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhc-cCchhheEeEecC-HHHHHHHH
Confidence 5 788999999999999999999865432 11222 4579999999999 5567889999886 45666666
Q ss_pred HhhhhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 226 FLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
........+.++..++++...++. +.+.++++.++++.+.+.|+++
T Consensus 277 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (404)
T 2o1b_A 277 KYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA 326 (404)
T ss_dssp HHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 555555556666666665554433 4566677788888899999876
No 63
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=6e-25 Score=196.62 Aligned_cols=249 Identities=18% Similarity=0.173 Sum_probs=171.2
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----C-ceEEecchHHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----D-RALCFTSGMAALA 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~-~~i~~~sG~~ai~ 84 (301)
.+++|+.....++ .+|.+......... .....|... |.+. ++++.+++.+.+|. + +++++++|++++.
T Consensus 26 ~~i~l~~~~~~~~--~~~~v~~a~~~~~~---~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~ 100 (411)
T 2o0r_A 26 GAVNLGQGFPDED--GPPKMLQAAQDAIA---GGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIA 100 (411)
T ss_dssp TCEESSCSSCSSC--CCHHHHHHHHHHHH---TTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHH
T ss_pred CeeeccCcCCCCC--CCHHHHHHHHHHHh---cCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHH
Confidence 4788874333344 34444433211111 112345543 4444 77777777776663 2 4555566678986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--------CCHHHHHhhcCCCceEEEEeCCCCCcccc
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~l~~~~~~v~i~~~~np~G~~ 155 (301)
++..++++||+|++++|.|+++. ..+...|.+++.++. .|++++++++++++++|++++|+||||.+
T Consensus 101 ~~~~~~~~~gd~Vl~~~~~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~ 176 (411)
T 2o0r_A 101 AAVLGLVEPGSEVLLIEPFYDSYS----PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAV 176 (411)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHhcCCCCEEEEeCCCcHhHH----HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCC
Confidence 56667889999999999999986 444567888887765 37899999998889999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----cc----CCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 156 CD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 156 ~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
.+ +++|+++|+++|+++|+||+|+.+.+.. .. ..+.|+++.|+||++ |++|++.|+++++ +.+.+.
T Consensus 177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~ 254 (411)
T 2o0r_A 177 LSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMF-NCTGWKIGWACGP-AELIAG 254 (411)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT-TCTTTCEEEEECC-HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhc-CCccceEEEEeeC-HHHHHH
Confidence 76 6899999999999999999998654321 11 146799999999999 5678899999986 456565
Q ss_pred HHHhhhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 224 LYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.......+.+.++..+.++...++ .+.+.++++.++++++.+.|++.
T Consensus 255 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 306 (411)
T 2o0r_A 255 VRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI 306 (411)
T ss_dssp HHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5554443333333333333333332 34566677778888888888764
No 64
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.93 E-value=2e-25 Score=197.16 Aligned_cols=246 Identities=13% Similarity=0.064 Sum_probs=176.0
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA- 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~- 84 (301)
.+++|++....++ .+|.+..... ... .....|.+. |.+. ++++.+++++.+|. ++++++++|++++.
T Consensus 24 ~~i~l~~~~~~~~--~~~~v~~a~~--~~~--~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~ 97 (376)
T 3ezs_A 24 RGLDLGIGEPQFE--TPKFIQDALK--NHT--HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFN 97 (376)
T ss_dssp CCCBCSSCCCCSC--CCHHHHHHHH--TTG--GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHH
T ss_pred CEEEeCCCCCCCC--CCHHHHHHHH--Hhh--hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHH
Confidence 7899985554455 3444443321 111 123445554 5544 78888888877775 35556666689986
Q ss_pred HHHhccCC--CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHH----HHHhhcCCCceEEEEeCCCCCcccccc-
Q 022194 85 AVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD----EVASAIGPWTKLVWVESPTNPRQQICD- 157 (301)
Q Consensus 85 ~~~~~~~~--g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~----~l~~~l~~~~~~v~i~~~~np~G~~~~- 157 (301)
++..++++ ||+|+++.|.|+++. ..++..|.+++.++.++.+ ++++.+.+++++|++++|+||||.+.+
T Consensus 98 ~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 173 (376)
T 3ezs_A 98 FPSFVLFDYQNPTIAYPNPFYQIYE----GAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSL 173 (376)
T ss_dssp HHHHHTTTCSSCEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCH
T ss_pred HHHHHcCCCCCCEEEEecCCcHhHH----HHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCH
Confidence 66677889 999999999999886 4556788999998876332 555666668899999999999999976
Q ss_pred --HHHHHHHHHHcCCEEEEeCCcCCccccC----cc---------CCCCcEEEecccccccCCCCceeeEEEEcchhHHH
Q 022194 158 --IRKIAEMAHAHGALLLVDNSIMSPVLSR----PL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (301)
Q Consensus 158 --l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~---------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~ 222 (301)
+++|+++|++||+++|+||+|+...+.. .. ..+.++++.|+||++ |.+|++.|+++.+ +.+.+
T Consensus 174 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~ 251 (376)
T 3ezs_A 174 EELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRS-SAPGLRSGFIAGD-SRLLE 251 (376)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTT-TCGGGCCEEEEEC-HHHHH
T ss_pred HHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhcc-CCccceeEEEeeC-HHHHH
Confidence 7778888999999999999998654421 11 357889999999999 5668899999886 45666
Q ss_pred HHHHhhhhcCCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHH
Q 022194 223 ELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~ 269 (301)
.+.......+.+.++..+.++...++ .+.+.++++.++.+.+.+.|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 301 (376)
T 3ezs_A 252 KYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK 301 (376)
T ss_dssp HHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 66666655566677776666555443 355666777777777877775
No 65
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=1.9e-25 Score=200.40 Aligned_cols=217 Identities=19% Similarity=0.165 Sum_probs=163.0
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
..++++++++++++.+ +++++++|++|+. ++..+. ++||+|+++++.|+++...+... ...|.+++.++.+
T Consensus 69 ~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~ 147 (423)
T 3lvm_A 69 AVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLAPQR 147 (423)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHH-HHTTCEEEEECCCT
T ss_pred HHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHH-HHcCCEEEEeccCC
Confidence 3688999999999987 6777777789986 444455 37999999999999987655332 6678999999876
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
|++++++++.+++++|++++++||||.+.|+++|+++|+++|+++|+|++++.+... .....++|+++.|+||++
T Consensus 148 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~ 227 (423)
T 3lvm_A 148 NGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIY 227 (423)
T ss_dssp TSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTT
T ss_pred CCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhc
Confidence 899999999999999999999999999999999999999999999999999887653 344567899999999976
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhh-------hhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
|+.| .|+++++++.... +.... .....+.+.....++..+++. +.+.+++..++++++.+.|+++
T Consensus 228 -g~~g--~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (423)
T 3lvm_A 228 -GPKG--IGALYVRRKPRVR-IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDI 303 (423)
T ss_dssp -SCSS--CEEEEECBTTBCC-CCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred -CCCC--eEEEEEeccccCC-CCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5666 5888887543321 11111 111233444444444333332 3566677888888899999888
Q ss_pred CCcceE
Q 022194 272 PRVKKV 277 (301)
Q Consensus 272 ~~v~~v 277 (301)
+++..+
T Consensus 304 ~~~~~~ 309 (423)
T 3lvm_A 304 EEVYLN 309 (423)
T ss_dssp TTEEEE
T ss_pred CCEEEe
Confidence 776443
No 66
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.93 E-value=1.2e-24 Score=195.17 Aligned_cols=251 Identities=17% Similarity=0.174 Sum_probs=177.5
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCCC-----ceEEecchHHHHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKAD-----RALCFTSGMAALA 84 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~-----~~i~~~sG~~ai~ 84 (301)
.+++|+.+...++ .+|.+.......... ......|... |.+. ++++.+++.+.+|.+ +++++++|++++.
T Consensus 29 ~~i~l~~g~~~~~--~~~~v~~a~~~~~~~-~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~ 105 (422)
T 3fvs_A 29 DVVNLGQGFPDFP--PPDFAVEAFQHAVSG-DFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALF 105 (422)
T ss_dssp CCEECCCSSCSSC--CCHHHHHHHHHHHHS-CGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHH
T ss_pred CceEeCCCCCCCC--CCHHHHHHHHHHHhC-CCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHH
Confidence 5788884443333 344443332111110 0012355554 5544 777888887777643 4555555679986
Q ss_pred -HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----------------CHHHHHhhcCCCceEEEEe
Q 022194 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----------------DLDEVASAIGPWTKLVWVE 146 (301)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-----------------d~~~l~~~l~~~~~~v~i~ 146 (301)
++..++++||+|+++.|.|+++. ..++..|.+++.++.+ |++++++++++++++|+++
T Consensus 106 ~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~ 181 (422)
T 3fvs_A 106 TAFQALVDEGDEVIIIEPFFDCYE----PMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN 181 (422)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEE
T ss_pred HHHHHHcCCCCEEEEcCCCchhhH----HHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEEC
Confidence 66667899999999999999987 4455678887777643 7899999999899999999
Q ss_pred CCCCCccccc---cHHHHHHHHHHcCCEEEEeCCcCCccccC-----cc----CCCCcEEEecccccccCCCCceeeEEE
Q 022194 147 SPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSR-----PL----ELGADIVMHSATKFIAGHSDVMAGVLA 214 (301)
Q Consensus 147 ~~~np~G~~~---~l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~----~~~~di~~~S~sK~~~g~~g~~~g~~~ 214 (301)
+|+||||.+. ++++|+++|+++|+++|+||+|+...+.. .. ..+.++++.|+||++ |++|++.|+++
T Consensus 182 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~ 260 (422)
T 3fvs_A 182 TPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTF-SATGWKVGWVL 260 (422)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEEE
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhcc-CCccceEEEEE
Confidence 9999999998 59999999999999999999998644321 11 124679999999999 66788999999
Q ss_pred EcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc-----------ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----------KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+++ .+.+.+.........+.++..+.++...+ +.+.+.++++.++++.+.+.|+++
T Consensus 261 ~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (422)
T 3fvs_A 261 GPD-HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV 327 (422)
T ss_dssp CCH-HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCH-HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 875 45565555555555556666655544433 335677788888999999999886
No 67
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.93 E-value=1.9e-24 Score=191.28 Aligned_cols=212 Identities=13% Similarity=0.108 Sum_probs=161.8
Q ss_pred chHHHHHHHHHhhcCCC--c-eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC----
Q 022194 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~--~-~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~---- 126 (301)
+.++++++++++++|.+ + +++++||++|+. ++..++++||+|++++|.|++.. +...++..|.+++.++.
T Consensus 53 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 130 (386)
T 2dr1_A 53 KVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVLEYEPGK 130 (386)
T ss_dssp HHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEEecCCCC
Confidence 44889999999999986 5 445566689986 55667899999999999998721 12555677888888886
Q ss_pred -CCHHHHHhhc--CCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 127 -CDLDEVASAI--GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 127 -~d~~~l~~~l--~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
.|++++++++ .+++++|++++++||||.+.|+++|+++|+++|+++|+|++|+.+... .....++|+++.|+||++
T Consensus 131 ~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~ 210 (386)
T 2dr1_A 131 AVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAF 210 (386)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTT
T ss_pred CCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccc
Confidence 3899999999 568999999999999999999999999999999999999999977653 333457899999999999
Q ss_pred cCCCCceeeEEEEcchhHHHHHH----------------Hhh--hhcCCCCCHHhHHHHHccccc------HHHHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELY----------------FLQ--NAEGSGLAPFDCWICLRGVKT------MALRVEKQQ 258 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~----------------~~~--~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~ 258 (301)
+++.| .|+++++++ +.+.+. ... .....+.+...++++..+++. +.+.++++.
T Consensus 211 ~~~~g--~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~ 287 (386)
T 2dr1_A 211 GVPPG--LAIGAFSER-FLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYE 287 (386)
T ss_dssp CCCSS--CEEEEECHH-HHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCc--eEEEEECHH-HHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 77655 589988754 444331 111 122344555555555444443 456678888
Q ss_pred HHHHHHHHHHHhC
Q 022194 259 DNAQKIAEFLASH 271 (301)
Q Consensus 259 ~~~~~l~~~l~~~ 271 (301)
++++++.+.|+++
T Consensus 288 ~~~~~l~~~L~~~ 300 (386)
T 2dr1_A 288 KRAKMVREGVREI 300 (386)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8899999999876
No 68
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.93 E-value=2.3e-25 Score=201.46 Aligned_cols=218 Identities=14% Similarity=0.129 Sum_probs=157.6
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC---CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEE
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA---DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~---~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~ 121 (301)
.|.+. |.+. ++++.+++.+.+|. ++++++++|++++. ++..++++||+|+++.|.|+++. ..++..|.++
T Consensus 113 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~----~~~~~~g~~~ 188 (448)
T 3aow_A 113 QYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL----QAFNFYEPQY 188 (448)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTCCEE
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCEE
Confidence 45544 4444 66666666555576 34555555579986 66667899999999999999987 4445678888
Q ss_pred EEecCC----CHHHHHhhcC----C--CceEEE-EeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC--
Q 022194 122 KRVNTC----DLDEVASAIG----P--WTKLVW-VESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-- 185 (301)
Q Consensus 122 ~~~~~~----d~~~l~~~l~----~--~~~~v~-i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-- 185 (301)
+.++.+ |+++++++++ + ++++|+ +++|+||||.+.+ +++|+++|++||+++|+||+|+.+.+..
T Consensus 189 ~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~ 268 (448)
T 3aow_A 189 IQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNP 268 (448)
T ss_dssp EEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCC
T ss_pred EEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC
Confidence 888763 7899998886 5 788885 6899999999976 6789999999999999999998654421
Q ss_pred ---c---cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc------HHHH
Q 022194 186 ---P---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALR 253 (301)
Q Consensus 186 ---~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~ 253 (301)
. ...+.++++.||||++ + +|+|.|+++++ +.+.+.+.........+.++..+.++...++. +.+.
T Consensus 269 ~~~~~~~~~~~~vi~~~S~SK~~-~-~GlriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~ 345 (448)
T 3aow_A 269 EKKIKALDNEGRVIYLGTFSKIL-A-PGFRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEI 345 (448)
T ss_dssp CCCTGGGCTTSCEEEEEESTTTT-C-GGGCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred CcCHHhcCCCCCEEEEccchhhc-c-ccccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHH
Confidence 1 1235689999999999 5 68899999997 45666655544443344455555554444432 4555
Q ss_pred HHHHHHHHHHHHHHHHh-CC
Q 022194 254 VEKQQDNAQKIAEFLAS-HP 272 (301)
Q Consensus 254 ~~~~~~~~~~l~~~l~~-~~ 272 (301)
++.+.++++.+.+.|++ .|
T Consensus 346 ~~~~~~~~~~l~~~L~~~~~ 365 (448)
T 3aow_A 346 RKFYKPRRDAMLEALEEFMP 365 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 66677888888888886 45
No 69
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.93 E-value=6.3e-24 Score=189.84 Aligned_cols=252 Identities=14% Similarity=0.135 Sum_probs=169.6
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcC----CCce--EEecchHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDK----ADRA--LCFTSGMAA 82 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~----~~~~--i~~~sG~~a 82 (301)
..+++|+ .++|++...+|.+....... .....+.|.+. |.+. ++++.+++....+ .++. ..+.+|+++
T Consensus 41 ~~~i~l~-~g~~~d~~~~~~v~~a~~~a---~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga 116 (409)
T 4eu1_A 41 KRKVNLS-IGVYRDDADQPFVLECVKQA---TLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGA 116 (409)
T ss_dssp SSCEECC-CSSCCCTTSCCCCCHHHHTC---CCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHH
T ss_pred cCceeee-eeEEECCCCCEeecHHHHhc---CccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHH
Confidence 4679999 78886666666555443222 22344556544 5443 5555554432221 2233 336666777
Q ss_pred HHH----HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcC---CCceEEEEeCC
Q 022194 83 LAA----VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG---PWTKLVWVESP 148 (301)
Q Consensus 83 i~~----~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~---~~~~~v~i~~~ 148 (301)
+.+ +..++++||+|++++|.|.++. ..++..|.+++.++.. |++++++.++ ++++++++++|
T Consensus 117 ~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p 192 (409)
T 4eu1_A 117 LRIGGDLLNRFVANCNRIYGPDVGYPNHE----SIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACA 192 (409)
T ss_dssp HHHHHHHGGGTSSSCCEEEEESSCCTHHH----HHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSS
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCcHhHH----HHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCC
Confidence 643 2345688999999999999986 5556788899988862 7899999885 35667777999
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----------ccCCCCcEEEecccccccCCCCceeeEE-
Q 022194 149 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVL- 213 (301)
Q Consensus 149 ~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----------~~~~~~di~~~S~sK~~~g~~g~~~g~~- 213 (301)
+||||.+.+ +++|+++|+++|+++|+||+|....+.. ......++++.|+||++ |.+|+|.|++
T Consensus 193 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~riG~~~ 271 (409)
T 4eu1_A 193 HNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNF-GLYGHRCGALH 271 (409)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTS-SCGGGCCEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccc-cCccCCceEEE
Confidence 999999986 5669999999999999999998655432 01234568999999999 6678899997
Q ss_pred -EEcchh----HHHHHHHhhhhcCCCCCHHhHHHHHcccc----------cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 214 -AVKGER----LAKELYFLQNAEGSGLAPFDCWICLRGVK----------TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 214 -~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+..++. +.+.+...........+...+.++...++ .+.+.++++.++++++.+.|+++
T Consensus 272 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 272 ISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666665 44444443333334444555544443333 24556678888888899998876
No 70
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.93 E-value=1.9e-24 Score=192.99 Aligned_cols=222 Identities=19% Similarity=0.185 Sum_probs=160.7
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
.|... |.+. ++++.+++.+.+|. ++++++++|++|+. ++..++++||+|++++|.|+++. ..++..|.+
T Consensus 73 ~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~ 148 (406)
T 1xi9_A 73 YYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYT----GLVKFYGGK 148 (406)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHHTTCE
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHH----HHHHHcCCE
Confidence 45443 4433 66677777665542 35556666689986 55667889999999999999886 444567788
Q ss_pred EEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----c
Q 022194 121 VKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P 186 (301)
Q Consensus 121 ~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~ 186 (301)
++.++.+ |++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+.+.+.. .
T Consensus 149 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~ 228 (406)
T 1xi9_A 149 PVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISP 228 (406)
T ss_dssp EEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCH
T ss_pred EEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCH
Confidence 8777642 789999999888999999999999999875 9999999999999999999998755421 1
Q ss_pred cC--CCC-cEEEecccccccCCCCceeeEEE--Ecch---hHHHHHHHhhhhcCCCCCHHhHHHHHccc----ccHHHHH
Q 022194 187 LE--LGA-DIVMHSATKFIAGHSDVMAGVLA--VKGE---RLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRV 254 (301)
Q Consensus 187 ~~--~~~-di~~~S~sK~~~g~~g~~~g~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~ 254 (301)
.. .+. ++++.|+||++ +++|++.|+++ .+++ .+.+.+....... .+.++..++++...+ +.+.+.+
T Consensus 229 ~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~ 306 (406)
T 1xi9_A 229 GSLTKDVPVIVMNGLSKVY-FATGWRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYM 306 (406)
T ss_dssp HHHCSSSCEEEEEESTTTT-CCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHcCCCceEEEEecccccc-CCCccEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHH
Confidence 11 356 89999999999 56678889998 6641 5556555444433 444444444443333 2356666
Q ss_pred HHHHHHHHHHHHHHHhCCCcc
Q 022194 255 EKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~v~ 275 (301)
+++.++++.+.+.|++++++.
T Consensus 307 ~~~~~~~~~l~~~L~~~~~~~ 327 (406)
T 1xi9_A 307 KKLKERRDYIYKRLNEIPGIS 327 (406)
T ss_dssp HHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHHHHHhCCCCe
Confidence 788888889999998876553
No 71
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.93 E-value=6e-24 Score=189.16 Aligned_cols=253 Identities=15% Similarity=0.162 Sum_probs=174.2
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCC-CccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENG-PYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~-~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai 83 (301)
..+++|++.+..++ .+|.+.............. ...|.+. |.+. ++++.+++.+.+|. ++++++++|++++
T Consensus 35 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al 112 (398)
T 3ele_A 35 ENVYDFSIGNPSIP--APQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASL 112 (398)
T ss_dssp GGCEECCSCCCCSC--CCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred CCeEEeecCCCCCC--CCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHH
Confidence 46899984422233 3444443321111100000 2345444 5544 78888888877763 2455566667998
Q ss_pred H-HHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCcccc
Q 022194 84 A-AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 84 ~-~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~ 155 (301)
. ++..++++| |+|++++|.|+++. ..++..|.+++.++.+ |++++++++++++++|++++|+||||.+
T Consensus 113 ~~~~~~l~~~g~d~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 188 (398)
T 3ele_A 113 SICFRALTSDAYDEFITIAPYFPEYK----VFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTV 188 (398)
T ss_dssp HHHHHHHCCSTTCEEEEESSCCTHHH----HHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCC
T ss_pred HHHHHHHcCCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCC
Confidence 6 666678999 99999999999987 4556778999998865 8899999999899999999999999999
Q ss_pred cc---HHHHHHHHHH------cCCEEEEeCCcCCccccC------ccCCCCcEEEecccccccCCCCceeeEEEEcchh-
Q 022194 156 CD---IRKIAEMAHA------HGALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGER- 219 (301)
Q Consensus 156 ~~---l~~l~~l~~~------~~~~li~D~~~~~~~~~~------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~- 219 (301)
.+ +++|+++|++ +|+++|+||+|+...+.. ....+.++++.|+||++ |.+|++.|+++++++.
T Consensus 189 ~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~ 267 (398)
T 3ele_A 189 YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSL-SLPGERIGYVLVPDEVY 267 (398)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTS-SCTTTCCEEEECCTTST
T ss_pred CCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcC-CCccceeEEEEEcchhh
Confidence 87 7778899999 999999999998644321 12345789999999999 5567899999998763
Q ss_pred ----HHHHHHHhhhhc-CCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 220 ----LAKELYFLQNAE-GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 220 ----~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+...+....... ....+...+.++...++... .++++.++++++.+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~L~~~ 323 (398)
T 3ele_A 268 DKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINAYKENRDLLYEGLTRI 323 (398)
T ss_dssp THHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHc
Confidence 223333333332 34455566666665555422 3466777777888888764
No 72
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.93 E-value=3.6e-24 Score=191.79 Aligned_cols=257 Identities=15% Similarity=0.122 Sum_probs=169.6
Q ss_pred ceeeecCCCCC--CCCccccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhh------c----CCCceEEe
Q 022194 11 TLLMNFSNEFD--PYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKL------D----KADRALCF 76 (301)
Q Consensus 11 ~~~~~~~~~~~--~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~------~----~~~~~i~~ 76 (301)
..+++|+.+.. +.....+|.+......... ......|.+. |.+. ++++.+++.+. . ..++++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~--~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~ 110 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAID--SQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLC 110 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHH--TTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEE
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhh--CCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEe
Confidence 56788873322 1233344444433211111 1112345443 4333 55555555521 1 13355566
Q ss_pred cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-------CCHHHHHhhcCCCceEEEEeCC
Q 022194 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 77 ~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~v~i~~~ 148 (301)
++|++++. ++..++++||+|++++|.|+++. ..++..|.+++.++. .|++++++++++++++|++++|
T Consensus 111 ~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p 186 (416)
T 1bw0_A 111 SGGSHGILMAITAICDAGDYALVPQPGFPHYE----TVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNP 186 (416)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESS
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCcHhHH----HHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCC
Confidence 66679986 56667889999999999999986 445567888877764 2789999999888999999999
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc---------Ccc---CCCCcEEEecccccccCCCCceeeEE
Q 022194 149 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---------RPL---ELGADIVMHSATKFIAGHSDVMAGVL 213 (301)
Q Consensus 149 ~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~---------~~~---~~~~di~~~S~sK~~~g~~g~~~g~~ 213 (301)
+||||.+.+ +++|+++|++||+++|+||+|+...+. ... ..+.++++.|+||++ +.+|++.|++
T Consensus 187 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Glr~G~~ 265 (416)
T 1bw0_A 187 SNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL-VVPGWRLGWL 265 (416)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTT-SCGGGCCEEE
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhC-CCCCceEEEE
Confidence 999999988 999999999999999999999864321 111 123468899999999 4467899999
Q ss_pred EEcch-hHHHH----HHHhhhhcCCCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 214 AVKGE-RLAKE----LYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 214 ~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
+++++ .+.+. +.... ....+.++..++++...++ .+.+.++++.++++.+.+.|++++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 336 (416)
T 1bw0_A 266 LYVDPHGNGPSFLEGLKRVG-MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLA 336 (416)
T ss_dssp EEECTTCSCHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred EeeCchhhHHHHHHHHHHHh-ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 98875 22222 21211 1233455555555544443 345667788888889999998876654
No 73
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.92 E-value=4.8e-24 Score=187.95 Aligned_cols=209 Identities=20% Similarity=0.193 Sum_probs=170.0
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...++++.++++++.+++++++||++|+. ++..+ +++||+|+++.+.|+++. ..+...|.+++.++.+
T Consensus 34 ~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~ 109 (367)
T 3nyt_A 34 GPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATA----ETVALLGAKPVYVDIDPRTY 109 (367)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHH----HHHHHcCCEEEEEecCCccC
Confidence 4568999999999999999999999999986 56666 789999999999999987 4455678899888864
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCC--cEEEecc--ccc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHSA--TKF 201 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~--di~~~S~--sK~ 201 (301)
|++++++++++++++|+ ++||+|...++++|.++|+++|+++|+|++|+.+........+. |+++.|| +|+
T Consensus 110 ~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~ 186 (367)
T 3nyt_A 110 NLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAP 186 (367)
T ss_dssp SBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred CcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCc
Confidence 78999999998898888 78899999999999999999999999999998766543333333 9999997 899
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhh------------cCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~ 269 (301)
+++ .|. +|+++.+++.+.+.+...... ....+++..+++.+..++.+.+..++..++++++.+.|+
T Consensus 187 l~~-~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~ 264 (367)
T 3nyt_A 187 LGC-YGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLK 264 (367)
T ss_dssp SCC-SSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-cCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 954 343 789988877777766554432 235567777777777777777777888888889999998
Q ss_pred hC
Q 022194 270 SH 271 (301)
Q Consensus 270 ~~ 271 (301)
+.
T Consensus 265 ~~ 266 (367)
T 3nyt_A 265 QV 266 (367)
T ss_dssp HT
T ss_pred cC
Confidence 86
No 74
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.92 E-value=3.2e-24 Score=191.04 Aligned_cols=216 Identities=16% Similarity=0.178 Sum_probs=161.3
Q ss_pred hHHHHHHHHHhhcCC---CceEEecchHHHHH-HHHhc----cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC
Q 022194 56 TRDALESLLAKLDKA---DRALCFTSGMAALA-AVTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~---~~~i~~~sG~~ai~-~~~~~----~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~ 127 (301)
...++++.++++++. ++++++++|++|+. ++..+ +++||+|++++|.|++....+...++..|.+++.++.+
T Consensus 68 ~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 147 (406)
T 1kmj_A 68 KMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLN 147 (406)
T ss_dssp HHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBC
T ss_pred HHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecC
Confidence 378899999999988 34556666679986 55566 78999999999999987655556666778888888864
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccc
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~ 201 (301)
|++++++++++++++|++++++||||.+.|+++|+++|+++|+++|+|++|+.+... .....++|+++.|+||+
T Consensus 148 ~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~ 227 (406)
T 1kmj_A 148 PDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKL 227 (406)
T ss_dssp TTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGT
T ss_pred CCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhc
Confidence 789999999989999999999999999999999999999999999999999876543 22234789999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhh---------------------hcCCCCCHHhHHHHH-ccccc-----HHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQN---------------------AEGSGLAPFDCWICL-RGVKT-----MALRV 254 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~-~~l~~-----~~~~~ 254 (301)
+ |++| .|++++++ .+.+.+..... ....+.++..+.+++ .+++. +.+..
T Consensus 228 ~-g~~G--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 303 (406)
T 1kmj_A 228 Y-GPTG--IGILYVKE-ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIA 303 (406)
T ss_dssp T-SCTT--CEEEEECH-HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred c-CCCC--cEEEEEeH-HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHH
Confidence 9 6766 58888874 45554332211 011122333333222 33332 34566
Q ss_pred HHHHHHHHHHHHHHHhCCCcc
Q 022194 255 EKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~v~ 275 (301)
++..++++++.+.|++++++.
T Consensus 304 ~~~~~~~~~l~~~L~~~~~~~ 324 (406)
T 1kmj_A 304 EYEQNLMHYALSQLESVPDLT 324 (406)
T ss_dssp HHHHHHHHHHHHHHTTSTTEE
T ss_pred HHHHHHHHHHHHHHhcCCCeE
Confidence 777888889999998877654
No 75
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.92 E-value=6.9e-24 Score=194.30 Aligned_cols=225 Identities=14% Similarity=0.119 Sum_probs=161.4
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhcc-CCCCeEEEcCCCCccHHHHHhhhcccC
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~-~~g~~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
...|... |.+. ++++.+++.+.+|. ++++++++|++++. ++..++ ++||+|+++.|.|+.+. ..++..
T Consensus 127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~----~~~~~~ 202 (500)
T 3tcm_A 127 TGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYS----ASIALH 202 (500)
T ss_dssp SSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHH----HHHHHT
T ss_pred CCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHH----HHHHHc
Confidence 3456555 6655 77888888777653 35556666679986 555566 79999999999999887 455567
Q ss_pred CcEEEEecCC-------CHHHHHhhcCC------CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 118 GVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 118 g~~~~~~~~~-------d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
|.+++.++.+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|...
T Consensus 203 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~ 282 (500)
T 3tcm_A 203 GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQEN 282 (500)
T ss_dssp TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcccc
Confidence 8888888743 78999999875 7899999999999999975 777888899999999999999875
Q ss_pred cccCc----------------cCCCCcEEEecccccccCCCCceeeEEEEc--chhHHHHHHHhhhhcCCCCCHHhHHHH
Q 022194 182 VLSRP----------------LELGADIVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFLQNAEGSGLAPFDCWIC 243 (301)
Q Consensus 182 ~~~~~----------------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
.+... ......+++.|+||.|.|.+|+|+|++++. ++.+.+.+...... ....+...+.++
T Consensus 283 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~ 361 (500)
T 3tcm_A 283 IYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASV-NLCSNITGQILA 361 (500)
T ss_dssp BCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHT-TCCCCHHHHHHH
T ss_pred ccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhc-ccCCCHHHHHHH
Confidence 54211 011124888999999966778999999882 44566655554432 233344443333
Q ss_pred Hccc--------------ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 244 LRGV--------------KTMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 244 ~~~l--------------~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
...+ +...+.++++.++++.+.+.|++++++.
T Consensus 362 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~ 407 (500)
T 3tcm_A 362 SLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGIT 407 (500)
T ss_dssp HHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 2222 2345566778888899999999887654
No 76
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=3.4e-24 Score=191.81 Aligned_cols=217 Identities=22% Similarity=0.201 Sum_probs=163.0
Q ss_pred chHHHHHHHHHhhcCC---CceEEecchHHHHH-HHHhc----cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 55 PTRDALESLLAKLDKA---DRALCFTSGMAALA-AVTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~---~~~i~~~sG~~ai~-~~~~~----~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
+...++++.++++++. +++++++||++|+. ++..+ +++||+|++++|.|++....+...++..|.+++.++.
T Consensus 72 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 151 (420)
T 1t3i_A 72 DAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL 151 (420)
T ss_dssp HHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc
Confidence 3478899999999988 46677777789986 55666 7899999999999999654444556667888888886
Q ss_pred C-----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccc
Q 022194 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (301)
Q Consensus 127 ~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK 200 (301)
+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+... .....+.|+++.|+||
T Consensus 152 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK 231 (420)
T 1t3i_A 152 DEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHK 231 (420)
T ss_dssp CTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGG
T ss_pred CCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhh
Confidence 3 789999999989999999999999999999999999999999999999999977653 3334578999999999
Q ss_pred cccCCCCceeeEEEEcchhHHHHHHHhhhh--------------------cCCCCCHHhHHHHHc-cccc-----HHHHH
Q 022194 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNA--------------------EGSGLAPFDCWICLR-GVKT-----MALRV 254 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~-~l~~-----~~~~~ 254 (301)
.+ |++| +|+++.++ .+.+.+...... ...+.++..+.+++. +++. +.+..
T Consensus 232 ~~-~~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 307 (420)
T 1t3i_A 232 MC-APTG--IGFLYGKE-EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIH 307 (420)
T ss_dssp TT-SCTT--CEEEEECH-HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred hc-CCCc--eEEEEEch-HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 77 6666 68888874 454543322111 111233333333222 2322 45567
Q ss_pred HHHHHHHHHHHHHHHhCCCcc
Q 022194 255 EKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~v~ 275 (301)
++..++++++.+.|++++++.
T Consensus 308 ~~~~~~~~~l~~~L~~~~g~~ 328 (420)
T 1t3i_A 308 NYEVELTHYLWQGLGQIPQLR 328 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHHHHHHHHHHHhCCCeE
Confidence 788888999999999877654
No 77
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.92 E-value=4.6e-24 Score=191.46 Aligned_cols=253 Identities=15% Similarity=0.095 Sum_probs=168.2
Q ss_pred eeeecCCCC--CCCCcccc-CeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcC----CC--ceEEecchH
Q 022194 12 LLMNFSNEF--DPYGALST-PLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDK----AD--RALCFTSGM 80 (301)
Q Consensus 12 ~~~~~~~~~--~~~g~~~~-p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~----~~--~~i~~~sG~ 80 (301)
.+++|+.+. |+.+...+ |.+....... ........|.+. |.+. ++++.+++....+ .+ +++++++|+
T Consensus 50 ~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~--~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t 127 (420)
T 4f4e_A 50 TKVNLGVGVYTNEDGKIPLLRAVRDAEKAR--VEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGT 127 (420)
T ss_dssp SCEECCCCSCCCTTSCCCCCHHHHHHHHHH--HHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred CcEEeeeeeeECCCCCccCcHHHHHHHHHH--hccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccH
Confidence 678998432 44444432 2232221111 111133456554 6655 7777777766554 33 445556667
Q ss_pred HHHHHH---HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC----C---CHHHHHhhcC---CCceEEEEeC
Q 022194 81 AALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----C---DLDEVASAIG---PWTKLVWVES 147 (301)
Q Consensus 81 ~ai~~~---~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~----~---d~~~l~~~l~---~~~~~v~i~~ 147 (301)
+|+..+ .+++++||+|++++|.|+++. ..++..|.+++.++. + |++.+++.++ ++++++++++
T Consensus 128 ~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~ 203 (420)
T 4f4e_A 128 GALKIGADFLRTLNPKAKVAISDPSWENHR----ALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHAC 203 (420)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESCCHHHH----HHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECS
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCcHhHH----HHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCC
Confidence 998643 456899999999999999986 455567888888876 2 7999999997 6788999999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----------ccCCCCcEEEecccccccCCCCceeeEEE
Q 022194 148 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVLA 214 (301)
Q Consensus 148 ~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----------~~~~~~di~~~S~sK~~~g~~g~~~g~~~ 214 (301)
|+||||.+.+ +++|+++|+++|+++|+||+|....+.. ....+.++++.|+||.+ |++|+|.|+++
T Consensus 204 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~ 282 (420)
T 4f4e_A 204 CHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSF-SLYGERVGALS 282 (420)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccC-cCcCCCcEEEE
Confidence 9999999965 7789999999999999999997655431 11346789999999999 66789999986
Q ss_pred E--cchhHHHH----HHHhhhhcCCCCCHHhHHHHHccc----------ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 215 V--KGERLAKE----LYFLQNAEGSGLAPFDCWICLRGV----------KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 215 ~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l----------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
. +++.+.+. +...........+...+.++...+ +.+.+.++++.++++.+.+.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 283 IITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp EECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4 33444332 222222222233333333332222 224666778888888899999876
No 78
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.92 E-value=4.8e-24 Score=190.05 Aligned_cols=251 Identities=19% Similarity=0.131 Sum_probs=174.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCcccc-CCCC-chHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGN-PTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..+++|. +|+++|...+|.+.................+. .++. +...++++.++++++.++.+++++|++++.++..
T Consensus 46 ~~~i~~~-~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~ 124 (401)
T 2bwn_A 46 QDITVWC-GNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLS 124 (401)
T ss_dssp EEEEECS-CSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH
T ss_pred CcEEEee-CCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHH
Confidence 3568898 68888876666555432221110000001111 1234 3488999999999998888999999876654433
Q ss_pred -c--cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC----CCceEEEEeCCCCCccccccHHHH
Q 022194 89 -L--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 89 -~--~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
+ ..+||+|+++.|.|+++...+ +..|.+++.++.+|++++++.++ +++++|++++++||||.+.|+++|
T Consensus 125 ~l~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i 200 (401)
T 2bwn_A 125 TLRVLFPGLIIYSDSLNHASMIEGI----KRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEI 200 (401)
T ss_dssp HHHHHSTTCEEEEETTCCHHHHHHH----HHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHH
T ss_pred HHhcCCCCCEEEECchhhHHHHHHH----HHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHH
Confidence 3 358999999999999887443 45788999999888999988876 578999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCcCCccccCc-------cC--CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhh--h
Q 022194 162 AEMAHAHGALLLVDNSIMSPVLSRP-------LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--A 230 (301)
Q Consensus 162 ~~l~~~~~~~li~D~~~~~~~~~~~-------~~--~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~--~ 230 (301)
+++|+++|+++|+||+|+.+.+... .. ...|+++.|+||+++++ +|+++.+ +.+.+.+..... .
T Consensus 201 ~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~----GG~~~~~-~~~~~~l~~~~~~~~ 275 (401)
T 2bwn_A 201 CDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVF----GGYIAAS-ARMVDAVRSYAPGFI 275 (401)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSC----CEEEEEC-HHHHHHHHHHCHHHH
T ss_pred HHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCC----CCEEecC-HHHHHHHHHhCcCce
Confidence 9999999999999999986543210 01 13589999999999643 3888776 455554443221 1
Q ss_pred cCCCCCHHhHHHHHcccc---cH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 231 EGSGLAPFDCWICLRGVK---TM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 231 ~~~~~~~~~~~~~~~~l~---~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
...+.++..++++..+++ .. .+.++++.++++++.+.|++.
T Consensus 276 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (401)
T 2bwn_A 276 FSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 321 (401)
T ss_dssp TSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 223334444444444433 32 566778888888899988875
No 79
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.92 E-value=4e-24 Score=190.59 Aligned_cols=254 Identities=12% Similarity=0.066 Sum_probs=165.0
Q ss_pred eeeecCCCCCCCCccccCee-ecceeecCCC-CCCCCccccCC-CCch-HHHHHHHHHhhcC----CCceEE--ecchHH
Q 022194 12 LLMNFSNEFDPYGALSTPLY-QTATFKQPSA-TENGPYDYTRS-GNPT-RDALESLLAKLDK----ADRALC--FTSGMA 81 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~-~~~~~~~~~~-~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~----~~~~i~--~~sG~~ 81 (301)
..++|+ ...|+....+|.+ .+..-..... .......|.+. |.+. ++++.+++.+.+| .++.++ +++|++
T Consensus 29 ~~i~l~-~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~ 107 (401)
T 7aat_A 29 KKMNLG-VGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTG 107 (401)
T ss_dssp TCEECC-CCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred Cceeee-eeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchH
Confidence 478898 6666433333322 1110000000 01234456554 6655 7777777776655 455555 566678
Q ss_pred HHHHH-Hh---ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-------CHHHHHhhcC---CCceEEEEeC
Q 022194 82 ALAAV-TH---LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG---PWTKLVWVES 147 (301)
Q Consensus 82 ai~~~-~~---~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~---~~~~~v~i~~ 147 (301)
++..+ .. ++++||+|++++|.|.++. ..++..|.+++.++.+ |++.+++.+. ++++++++++
T Consensus 108 al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~ 183 (401)
T 7aat_A 108 SLRVGANFLQRFFKFSRDVYLPKPSWGNHT----PIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHAC 183 (401)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEESCCTTHH----HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESS
T ss_pred HHHHHHHHHHHhccCCCEEEEcCCCchhHH----HHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCC
Confidence 88633 33 3489999999999999997 4455678888888753 5675555554 5788999999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccCc-----------cCCCCcEEEecccccccCCCCceeeEE
Q 022194 148 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP-----------LELGADIVMHSATKFIAGHSDVMAGVL 213 (301)
Q Consensus 148 ~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~~-----------~~~~~di~~~S~sK~~~g~~g~~~g~~ 213 (301)
|+||||.+.+ +++|+++|++||+++|+||+|....+... .....++++.|+||+| |++|+|.|++
T Consensus 184 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~RiG~l 262 (401)
T 7aat_A 184 AHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNM-GLYGERAGAF 262 (401)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccc-ccccCceEEE
Confidence 9999998864 88899999999999999999976554321 2335679999999999 6778999998
Q ss_pred EE--cchh----HHHHHHHhhhhcCCCCCHHhHHHHHcc----------cccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 214 AV--KGER----LAKELYFLQNAEGSGLAPFDCWICLRG----------VKTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 214 ~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+. .++. +...+...........+...+..+... .+.+.+.++++.++++++.+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 263 TVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 87 2333 333333333322333333333333222 2334556677888888899988876
No 80
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.92 E-value=5.8e-25 Score=193.71 Aligned_cols=213 Identities=18% Similarity=0.183 Sum_probs=161.5
Q ss_pred CchHHHHHHH-HHhhcCCCceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEec--CC-
Q 022194 54 NPTRDALESL-LAKLDKADRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN--TC- 127 (301)
Q Consensus 54 ~~~~~~l~~~-l~~~~~~~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~--~~- 127 (301)
.+...+++++ ++++++.+ .+++++| ++|+. ++..++++||+|++++|.|+++.. .++..|.+++.++ .+
T Consensus 52 ~~~~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~ 126 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYV----AAERAGLNIALVPKTDYP 126 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH----HHHHTTCEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHH----HHHHcCCeEEEeecccCC
Confidence 3458999999 99999988 5555555 78986 666678999999999999998874 3567788999998 55
Q ss_pred ----CHHHHHhhcC-----CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEec
Q 022194 128 ----DLDEVASAIG-----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHS 197 (301)
Q Consensus 128 ----d~~~l~~~l~-----~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S 197 (301)
|+++++++++ +++++|++++++||+|.+.|+++|+++|+++|+++|+|++|+.+... .....+.|++++|
T Consensus 127 ~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 206 (371)
T 2e7j_A 127 DYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGS 206 (371)
T ss_dssp TCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEE
T ss_pred CCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEec
Confidence 8999999987 68999999999999999999999999999999999999999987653 3334478999999
Q ss_pred ccccccCCCCceeeEEEEcchhHHHH-HHHhhh--hc-----CCCCCHHhHHHHHcccccHH-HHHHHH--HHHHHHHHH
Q 022194 198 ATKFIAGHSDVMAGVLAVKGERLAKE-LYFLQN--AE-----GSGLAPFDCWICLRGVKTMA-LRVEKQ--QDNAQKIAE 266 (301)
Q Consensus 198 ~sK~~~g~~g~~~g~~~~~~~~~~~~-~~~~~~--~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~l~~ 266 (301)
+||+++++. ++|+++++++ +.+. +..... .. ..+.+....+++..+++.+. +..++. .++++++.+
T Consensus 207 ~sK~~~~~~--~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 283 (371)
T 2e7j_A 207 GHKSMAASG--PIGVMGMKEE-WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAA 283 (371)
T ss_dssp HHHHSSCCS--SCEEEEECTT-TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHH
T ss_pred CCcCCCCCC--CcEEEEEech-hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999997654 5799998865 3332 222221 11 33344444544444554444 345566 788888999
Q ss_pred HHHhCCCcc
Q 022194 267 FLASHPRVK 275 (301)
Q Consensus 267 ~l~~~~~v~ 275 (301)
.|+++ ++.
T Consensus 284 ~L~~~-~~~ 291 (371)
T 2e7j_A 284 EMEKL-GIK 291 (371)
T ss_dssp HHHHT-TCE
T ss_pred HHHHc-CcE
Confidence 99886 553
No 81
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.92 E-value=9.4e-25 Score=191.92 Aligned_cols=248 Identities=13% Similarity=0.141 Sum_probs=171.1
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~ 87 (301)
..+++|++..+.++ .+|.+........ ......+..++.+...++++++++++|.+ ++++++||++++. ++.
T Consensus 26 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~---~~~~~~~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~ 100 (360)
T 3hdo_A 26 ASWIKLNTNENPYP--PSPEVVKAILEEL---GPDGAALRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIR 100 (360)
T ss_dssp TTSEECSSCCCSSC--CCHHHHHHHHHHH---TTTCGGGGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred cceeeccCCCCCCC--CCHHHHHHHHHHH---hcccchhhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 46899984444344 4454443321111 11111112222233578899999998854 5666777789986 666
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHH
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
.++++||+|+++.|.|+++. ..++..|.+++.++.++...+++..+ .+++++++++|+||||.+.|+++|.++|+
T Consensus 101 ~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~ 176 (360)
T 3hdo_A 101 AFAAEGEEIGYVHPSYSYYG----TLAEVQGARVRTFGLTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELAR 176 (360)
T ss_dssp HHCCTTCEEEEESSSCTHHH----HHHHHHTCEEEEECBCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred HHhCCCCEEEEcCCChHHHH----HHHHHCCCEEEEeeCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence 77899999999999999987 45556788999988753212222222 24679999999999999999999999999
Q ss_pred HcCCEEEEeCCcCCccccC----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHH
Q 022194 167 AHGALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (301)
Q Consensus 167 ~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
++|+++|+||+|+...... ....+.++++.|+||++ |.+|++.|+++++ +.+.+.+..... ..+.++..+++
T Consensus 177 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~~~~~~~--~~~~~~~~~~a 252 (360)
T 3hdo_A 177 RCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSY-SLAGMRIGLAIAR-PEVIAALDKIRD--HYNLDRLAQAA 252 (360)
T ss_dssp HBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTT-SCTTSCCEEEECC-HHHHHHHHHHSC--SCCSCHHHHHH
T ss_pred HCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhh-cCCccceeeEeeC-HHHHHHHHHhCC--CCCCCHHHHHH
Confidence 9999999999998532111 12345679999999999 5567899999985 556665544433 34566666666
Q ss_pred HHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 243 CLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 243 ~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+...++. +.+.++++.++++++.+.|+++
T Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 284 (360)
T 3hdo_A 253 CVAALRDQAYLSECCRRIRETREWFTTELRSI 284 (360)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5555443 5667778888888999999876
No 82
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.92 E-value=9.9e-24 Score=193.08 Aligned_cols=224 Identities=16% Similarity=0.150 Sum_probs=160.5
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcC-C----CceEEecchHHHHH-HHHhccCCCC----eEEEcCCCCccHHHHHhhhc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDK-A----DRALCFTSGMAALA-AVTHLLGTGE----EIVAGDDLYGGTDRLLSRVT 114 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~-~----~~~i~~~sG~~ai~-~~~~~~~~g~----~Vlv~~~~y~~~~~~~~~~~ 114 (301)
..|+.. |.+. ++++.+++.+..| . +++++++++++++. ++..++++|| .|+++.|.|+.+. ..+
T Consensus 123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~----~~~ 198 (498)
T 3ihj_A 123 GSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYS----AVI 198 (498)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHH----HHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHH----HHH
Confidence 346555 6654 8888888888774 3 35555555578886 5566778775 9999999999887 455
Q ss_pred ccCCcEEEEecCC-------CHHHHHhhcCC-----CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcC
Q 022194 115 PKTGVVVKRVNTC-------DLDEVASAIGP-----WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 115 ~~~g~~~~~~~~~-------d~~~l~~~l~~-----~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~ 179 (301)
...|.+++.++.+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|++||+++|+||+|.
T Consensus 199 ~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~ 278 (498)
T 3ihj_A 199 SELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQ 278 (498)
T ss_dssp HHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred HHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcc
Confidence 5678888888765 88999998875 5899999999999999975 7779999999999999999998
Q ss_pred CccccCc---c--------------CCCCcEEEecccccccCCCCceeeEEEE--cchhHHHHHHHhhhhcCCCCCHHhH
Q 022194 180 SPVLSRP---L--------------ELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDC 240 (301)
Q Consensus 180 ~~~~~~~---~--------------~~~~di~~~S~sK~~~g~~g~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
...+... . .....+++.|+||.+.|.+|+|+||++. .++.+.+.+...... ....+...+
T Consensus 279 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~q 357 (498)
T 3ihj_A 279 DNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSV-RLCPPVSGQ 357 (498)
T ss_dssp TCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHH-SCCCCHHHH
T ss_pred ccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhc-cCCCCHHHH
Confidence 7655321 0 0112478999999997777899999985 456676766555443 233344444
Q ss_pred HHHHcccc--------------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 241 WICLRGVK--------------TMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 241 ~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.++...++ ...+.++++.++++.+.+.|++++++.
T Consensus 358 ~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~ 406 (498)
T 3ihj_A 358 AAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIH 406 (498)
T ss_dssp HHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 44333322 234555778888999999999887653
No 83
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.92 E-value=9.3e-24 Score=188.19 Aligned_cols=212 Identities=23% Similarity=0.280 Sum_probs=166.8
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
+...++++.++++++.++.+++++|++|+. ++..+ +++||+|+++.|.|+++. ..++..|.+++.++.+
T Consensus 63 ~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~ 138 (399)
T 2oga_A 63 PELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASW----LAVSATGATPVPVEPHEDHPT 138 (399)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECBCSSSSS
T ss_pred hhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHH----HHHHHCCCEEEEEecCCCCCC
Confidence 558899999999999988999999999986 55666 789999999999999986 4445678888888753
Q ss_pred -CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEecc--cccc
Q 022194 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSA--TKFI 202 (301)
Q Consensus 128 -d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~S~--sK~~ 202 (301)
|++++++++++++++|+ ++||+|.+.++++|.++|+++|+++|+|++|+.+........+ .|+++.|+ +|++
T Consensus 139 ~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~ 215 (399)
T 2oga_A 139 LDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNL 215 (399)
T ss_dssp BCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSS
T ss_pred cCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccC
Confidence 78999999988888877 5789999999999999999999999999999877533222233 69999999 6999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhh------------cCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHh
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
+++| ++|+++.+++.+.+.+...... .....++..++++..+++.+.+..++..++++++.+.|++
T Consensus 216 -~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 293 (399)
T 2oga_A 216 -GCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAG 293 (399)
T ss_dssp -CCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTT
T ss_pred -CcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5556 6899988766666655544322 1124567777777777777777777777888889888887
Q ss_pred CCCcc
Q 022194 271 HPRVK 275 (301)
Q Consensus 271 ~~~v~ 275 (301)
++++.
T Consensus 294 ~~g~~ 298 (399)
T 2oga_A 294 LPGIG 298 (399)
T ss_dssp CTTCB
T ss_pred CCCcc
Confidence 76653
No 84
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.92 E-value=7.4e-24 Score=190.62 Aligned_cols=250 Identities=13% Similarity=0.113 Sum_probs=170.0
Q ss_pred ceeeecCCCCC-CCCccccCee--ecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhc-CCC--c---eEEecch
Q 022194 11 TLLMNFSNEFD-PYGALSTPLY--QTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLD-KAD--R---ALCFTSG 79 (301)
Q Consensus 11 ~~~~~~~~~~~-~~g~~~~p~~--~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~-~~~--~---~i~~~sG 79 (301)
..+++|+.+.. .+|. +|.+ ...... .........|.+. |.+. ++++.+++.+.. +.+ + ++++++|
T Consensus 47 ~~~i~l~~g~~~~~~~--~~~~~~~~a~~~--~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~ 122 (430)
T 2x5f_A 47 STTYNATIGMATNKDG--KMFASSLDAMFN--DLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNAL 122 (430)
T ss_dssp TCSEECCCSSCEETTE--ECCCHHHHTTBS--SCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHH
T ss_pred CCcEEeeeeeccCCCC--chhhHHHHHHHH--hcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCc
Confidence 35789984443 3663 4544 222211 1111123345543 4333 444444443332 443 4 5566666
Q ss_pred HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhccc-CCcEEEEecCC------CHHHHHhhcCC---CceEEEEeCC
Q 022194 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-TGVVVKRVNTC------DLDEVASAIGP---WTKLVWVESP 148 (301)
Q Consensus 80 ~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~-~g~~~~~~~~~------d~~~l~~~l~~---~~~~v~i~~~ 148 (301)
++++. ++..++++||+|++++|.|+++. ..++. .|.+++.++.+ |++++++++++ ++++|++++|
T Consensus 123 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p 198 (430)
T 2x5f_A 123 THGLSLVGDLFVNQDDTILLPEHNWGNYK----LVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYP 198 (430)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHH----HHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSS
T ss_pred hHHHHHHHHHHhCCCCEEEEcCCcCccHH----HHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCC
Confidence 79986 56667899999999999999986 45556 78888888752 67889988875 7899999999
Q ss_pred CCCcccccc---HHHHHHHHHH-----cCCEEEEeCCcCCccccC----c-c----C-CCC---cEEEecccccccCCCC
Q 022194 149 TNPRQQICD---IRKIAEMAHA-----HGALLLVDNSIMSPVLSR----P-L----E-LGA---DIVMHSATKFIAGHSD 207 (301)
Q Consensus 149 ~np~G~~~~---l~~l~~l~~~-----~~~~li~D~~~~~~~~~~----~-~----~-~~~---di~~~S~sK~~~g~~g 207 (301)
+||||.+.+ +++|+++|++ +|+++|+||+|+...+.. + . . .+. ++++.|+||++ |++|
T Consensus 199 ~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G 277 (430)
T 2x5f_A 199 NNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEF-FAWG 277 (430)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHT-TCGG
T ss_pred CCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCC-CCCC
Confidence 999999987 8899999999 999999999998654321 1 1 1 346 78999999999 5568
Q ss_pred ceeeEEEE--cchhHHHHHHHhhhh----cCCCCCHHhHHHHHcccc-c---HHH---HHHHHHHHHHHHHHHHH
Q 022194 208 VMAGVLAV--KGERLAKELYFLQNA----EGSGLAPFDCWICLRGVK-T---MAL---RVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 208 ~~~g~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~-~---~~~---~~~~~~~~~~~l~~~l~ 269 (301)
++.|++++ +++.+.+.+...... ...+.++..++++...++ . ..+ .++++.++++.+.+.|+
T Consensus 278 ~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 278 FRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp GCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999998 235566655544433 445567776666666555 3 333 66777788888888887
No 85
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.92 E-value=4.5e-24 Score=189.16 Aligned_cols=218 Identities=18% Similarity=0.148 Sum_probs=163.5
Q ss_pred chHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
+...++++.+++++|.+ ++++++||++++. ++..+ +++||+|++++|.|+++...+...++..|.+++.++.+
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 138 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATL 138 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCC
Confidence 34788999999999876 5666777789986 55556 68999999999999998765555556678888888863
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH----HcCCEEEEeCCcCCccccC-ccCCCCcEEEecc
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH----AHGALLLVDNSIMSPVLSR-PLELGADIVMHSA 198 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~----~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~ 198 (301)
|++++++.+++++++|++++|+||||.+.|+++|.++|+ ++|+++|+|++|+.+.... ....+.|+++.|+
T Consensus 139 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~ 218 (390)
T 1elu_A 139 NQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTG 218 (390)
T ss_dssp SSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEES
T ss_pred CccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccc
Confidence 688999999889999999999999999999999999999 9999999999998765432 2245789999999
Q ss_pred cccccCCCCceeeEEEEcchhHHHHHHHh----------------------hhhcCCCCCHHhHHHHHcccc------cH
Q 022194 199 TKFIAGHSDVMAGVLAVKGERLAKELYFL----------------------QNAEGSGLAPFDCWICLRGVK------TM 250 (301)
Q Consensus 199 sK~~~g~~g~~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~l~------~~ 250 (301)
||++.|+.| .|+++++++ +.+.+... .....++.+.....++..+++ .+
T Consensus 219 ~K~~~~~~g--~G~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~ 295 (390)
T 1elu_A 219 HKWFAGPAG--VGGLYIHGD-CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTA 295 (390)
T ss_dssp SSTTCCCTT--CEEEEECTT-TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCH
T ss_pred cccccCCCc--eEEEEECHH-hHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 997666655 588888764 33322211 111122334443333322222 25
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 251 ALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.+..++..++++++.+.|++++++.
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~~g~~ 320 (390)
T 1elu_A 296 EERYQAICQRSEFLWRGLNQLPHVH 320 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 6677888889999999998876653
No 86
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.92 E-value=1.3e-24 Score=195.74 Aligned_cols=250 Identities=14% Similarity=0.095 Sum_probs=172.3
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCC-ccccCC-CCch-HHHHHHHHHhhcC----CCceEEecchHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGP-YDYTRS-GNPT-RDALESLLAKLDK----ADRALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~-~~y~~~-g~~~-~~~l~~~l~~~~~----~~~~i~~~sG~~ai 83 (301)
..+++|+++...++ .+|.+........ .... ..|... |.+. ++++.+++.+.+| .++++++++|++++
T Consensus 44 ~~~i~l~~~~~~~~--~~~~v~~a~~~~~---~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al 118 (437)
T 3g0t_A 44 TKFCRMEMGVPGLP--APQIGIETEIQKL---REGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGC 118 (437)
T ss_dssp CCCEECCCCSCCSC--CCHHHHHHHHHHH---HHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred CCEEeccCcCCCCC--CCHHHHHHHHHHH---hCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHH
Confidence 46789984443343 3444443321110 0012 345443 4333 5666666665544 23556666667998
Q ss_pred H-HHHhcc--CCCC--eEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHHHHHhhc-CCCceEEEEeCCCCC
Q 022194 84 A-AVTHLL--GTGE--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAI-GPWTKLVWVESPTNP 151 (301)
Q Consensus 84 ~-~~~~~~--~~g~--~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l-~~~~~~v~i~~~~np 151 (301)
. ++..++ ++|| +|+++.|.|+++.. .++..|.+++.++.+ |++++++++ ++++++|++++|+||
T Consensus 119 ~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~np 194 (437)
T 3g0t_A 119 FVSFLVANRTHKNREYGTLFIDPGFNLNKL----QCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNP 194 (437)
T ss_dssp HHHHHHHTTSCTTCSCCEEEEESCCHHHHH----HHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTT
T ss_pred HHHHHHHhcCCCCCccEEEEeCCCcHhHHH----HHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCC
Confidence 6 556666 8999 99999999999874 445567777777753 789999999 678999999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc-------------Ccc-CCCCcEEEecccccccCCCCceeeEEE
Q 022194 152 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------------RPL-ELGADIVMHSATKFIAGHSDVMAGVLA 214 (301)
Q Consensus 152 ~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~-------------~~~-~~~~di~~~S~sK~~~g~~g~~~g~~~ 214 (301)
||.+.+ +++|+++|+++|+++|+|++|+...+. ... ..+.++++.|+||++ |++|++.|+++
T Consensus 195 tG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~ 273 (437)
T 3g0t_A 195 TWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAF-SYAGQRIGVLM 273 (437)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTT-SCGGGCCEEEE
T ss_pred CCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCC-CCccceeEEEE
Confidence 999986 777899999999999999999754332 111 246779999999999 55678999999
Q ss_pred EcchhHHH-H-----------------HHHhhhhcCCCCCHHhHHHHHccccc-------HHHHHHHHHHHHHHHHHHHH
Q 022194 215 VKGERLAK-E-----------------LYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 215 ~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l~ 269 (301)
++++ +.+ . +.........+.++..+.++...++. +.+.++++.++++.+.+.|+
T Consensus 274 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (437)
T 3g0t_A 274 ISGK-LYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFL 352 (437)
T ss_dssp ECHH-HHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ECHH-HhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8754 444 4 44444444455666665555444432 66777888889999999998
Q ss_pred hC
Q 022194 270 SH 271 (301)
Q Consensus 270 ~~ 271 (301)
++
T Consensus 353 ~~ 354 (437)
T 3g0t_A 353 DN 354 (437)
T ss_dssp TT
T ss_pred Hc
Confidence 86
No 87
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.92 E-value=7.1e-24 Score=187.44 Aligned_cols=212 Identities=15% Similarity=0.097 Sum_probs=160.8
Q ss_pred chHHHHHHHHHhhcCCCc----eEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 55 PTRDALESLLAKLDKADR----ALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~----~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
+..++++++++++++.+. +++++||++++.++..++++||+|+++++.|++. .+...++..|.+++.++.+
T Consensus 35 ~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~ 112 (384)
T 3zrp_A 35 EALAYSLKGLRYVMGASKNYQPLIIPGGGTSAMESVTSLLKPNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPSPGD 112 (384)
T ss_dssp HHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHHHGGGGCCTTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCSTTC
T ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHHHHHhhcCCCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCCCCC
Confidence 347889999999998764 5666777888885566789999999999999763 2336667889999999875
Q ss_pred --CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccccc
Q 022194 128 --DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 --d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (301)
|++++++++++ ++++|++++++||||.+.|+++|.++|++||+++|+|++++.+... .....++|++++|+||+++
T Consensus 113 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~ 192 (384)
T 3zrp_A 113 YVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALG 192 (384)
T ss_dssp CCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTC
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCccccc
Confidence 89999999986 7999999999999999999999999999999999999999877654 3344578999999999997
Q ss_pred CCCCceeeEEEEcchhHHHHH-------------HHhh---hh------cC-CCCCHHhHHHHHccccc-----HHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAKEL-------------YFLQ---NA------EG-SGLAPFDCWICLRGVKT-----MALRVE 255 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~-------------~~~~---~~------~~-~~~~~~~~~~~~~~l~~-----~~~~~~ 255 (301)
|+.| .|+++.+++.+ +.+ .... .. .. .+.+.....++..+++. +.+.++
T Consensus 193 ~~~g--~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~ 269 (384)
T 3zrp_A 193 SAAG--LGLLLLSPKAL-SILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIK 269 (384)
T ss_dssp CCSS--EEEEEECHHHH-HHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCc--eEEEEECHHHH-HHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 7766 68888876543 333 1111 11 11 13444444333333332 456677
Q ss_pred HHHHHHHHHHHHHHhC
Q 022194 256 KQQDNAQKIAEFLASH 271 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~ 271 (301)
+..++++++.+.|+++
T Consensus 270 ~~~~~~~~l~~~L~~~ 285 (384)
T 3zrp_A 270 RHTMVASAIRAGLEAL 285 (384)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHC
Confidence 8888888999999876
No 88
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.92 E-value=9.6e-24 Score=186.27 Aligned_cols=211 Identities=19% Similarity=0.242 Sum_probs=168.1
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...++++.++++++.++.+++++|++|+. ++..+ +++||+|+++.+.|+++. ..++..|.+++.++.+
T Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~ 112 (374)
T 3uwc_A 37 GAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASV----GAIVQAGATPVLVDSENGYV 112 (374)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHH----HHHHHTTCEEEEECBCTTSS
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHH----HHHHHcCCEEEEEecCCCCC
Confidence 4568999999999999999999999999986 56667 889999999999999987 4456788999999875
Q ss_pred -CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEeccc--ccc
Q 022194 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFI 202 (301)
Q Consensus 128 -d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~S~s--K~~ 202 (301)
|++++++++++++++|+ ++||+|...++++|+++|+++|+++|+|++|+.+........+ .|+++.|+| |++
T Consensus 113 ~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l 189 (374)
T 3uwc_A 113 IDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNL 189 (374)
T ss_dssp BCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSS
T ss_pred cCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcC
Confidence 89999999998888887 8999999999999999999999999999999977543333233 699999977 999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhh------------cCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHh
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
++ .|. +|+++.+++.+.+.+...... ....+.+..+......++.+.+..++..++.+++.+.|++
T Consensus 190 ~~-~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 267 (374)
T 3uwc_A 190 NV-WSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVD 267 (374)
T ss_dssp CC-SSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGG
T ss_pred Cc-cce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 54 333 788888877776665544321 1122455556555666667777778888888899999988
Q ss_pred CCC
Q 022194 271 HPR 273 (301)
Q Consensus 271 ~~~ 273 (301)
.++
T Consensus 268 ~~~ 270 (374)
T 3uwc_A 268 LSE 270 (374)
T ss_dssp GTT
T ss_pred CCC
Confidence 765
No 89
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.92 E-value=1.9e-24 Score=192.92 Aligned_cols=211 Identities=17% Similarity=0.204 Sum_probs=151.0
Q ss_pred HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 57 RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
++++.+++.+.+|. ++++++++|++|+. ++..++++||+|+++.|.|+++. ..++..|.+++.++.+
T Consensus 81 ~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~ 156 (407)
T 2zc0_A 81 REELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTL----LAFEQLGAKIEGVPVDNDGM 156 (407)
T ss_dssp HHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTTCEEEEEEEETTEE
T ss_pred HHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCEEEEcccCCCCC
Confidence 55666666555572 24455555579986 56667789999999999999886 4455678888888753
Q ss_pred CHHHHHhhcC----C--CceEE-EEeCCCCCccccccHH---HHHHHHHHcCCEEEEeCCcCCccccC-----cc---CC
Q 022194 128 DLDEVASAIG----P--WTKLV-WVESPTNPRQQICDIR---KIAEMAHAHGALLLVDNSIMSPVLSR-----PL---EL 189 (301)
Q Consensus 128 d~~~l~~~l~----~--~~~~v-~i~~~~np~G~~~~l~---~l~~l~~~~~~~li~D~~~~~~~~~~-----~~---~~ 189 (301)
|+++++++++ + ++++| ++++|+||||.+.|.+ +|+++|++||+++|+||+|+.+.+.. .. ..
T Consensus 157 d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 236 (407)
T 2zc0_A 157 RVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNE 236 (407)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSS
T ss_pred CHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCC
Confidence 7899998887 5 78887 4689999999998865 89999999999999999998654421 11 12
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc-------cHHHHHHHHHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-------TMALRVEKQQDNAQ 262 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~~ 262 (301)
+.++++.|+||+++ +|+++|+++++ +.+.+.+...........++..+.++...++ .+.+.++++.++++
T Consensus 237 ~~~i~~~s~sK~~~--~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
T 2zc0_A 237 GRVIVAGTLSKVLG--TGFRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRD 313 (407)
T ss_dssp CCEEEEEESTTTTC--TTSCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHH
T ss_pred CCEEEEcccccccC--CCcceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 46799999999995 57889999987 5566666555544444445555544433332 23345566777788
Q ss_pred HHHHHHHh-CCCc
Q 022194 263 KIAEFLAS-HPRV 274 (301)
Q Consensus 263 ~l~~~l~~-~~~v 274 (301)
++.+.|++ .+++
T Consensus 314 ~l~~~L~~~~~~~ 326 (407)
T 2zc0_A 314 IMLKALENHLPNA 326 (407)
T ss_dssp HHHHHHHHHCTTS
T ss_pred HHHHHHHHhCCCC
Confidence 88888876 3544
No 90
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.92 E-value=3.1e-24 Score=192.05 Aligned_cols=251 Identities=14% Similarity=0.098 Sum_probs=169.8
Q ss_pred eeeecCCCCCCCCccccC----eeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecchHHH
Q 022194 12 LLMNFSNEFDPYGALSTP----LYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSGMAA 82 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p----~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG~~a 82 (301)
.+++|+ .++|++...++ .+... ... ........|.+. |.+. ++++.+++.+..+.+ ++++++||++|
T Consensus 38 ~~i~l~-~g~~~~~~~~~~~~~~v~~a-~~~--~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~a 113 (413)
T 3t18_A 38 AVINAA-LGTLLDDKGKIIALPSVYDR-LDE--MDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGA 113 (413)
T ss_dssp GCEECC-SCCCBCTTSCBCCCHHHHHH-HHH--SCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHH
T ss_pred ceEecc-ccCccCCCCCcCChHHHHHH-HHh--cCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHH
Confidence 678998 67775433232 22221 111 111123456554 6655 888888887777666 66667777899
Q ss_pred HH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHHHHHhhcCC----Cce-EEEEeCC-C
Q 022194 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGP----WTK-LVWVESP-T 149 (301)
Q Consensus 83 i~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~----~~~-~v~i~~~-~ 149 (301)
+. ++..++++||+|++++|.|+++. ..++..|.+++.++.. |++++++++++ +++ ++++++| +
T Consensus 114 l~~~~~~~~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~ 189 (413)
T 3t18_A 114 IRSAIFSYLDEGDPLICHDYYWAPYR----KICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGN 189 (413)
T ss_dssp HHHHHHHHCCSSCEEEEESSCCTHHH----HHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSC
T ss_pred HHHHHHHhcCCCCEEEECCCCcccHH----HHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCC
Confidence 86 66778999999999999999987 4456678888888852 78999988874 666 7888999 9
Q ss_pred CCccccccH---HHHHHHHH------HcCCEEEEeCCcCCccccC----c-c----CCCC---cEEEecccccccCCCCc
Q 022194 150 NPRQQICDI---RKIAEMAH------AHGALLLVDNSIMSPVLSR----P-L----ELGA---DIVMHSATKFIAGHSDV 208 (301)
Q Consensus 150 np~G~~~~l---~~l~~l~~------~~~~~li~D~~~~~~~~~~----~-~----~~~~---di~~~S~sK~~~g~~g~ 208 (301)
||||.+.+. ++|+++|+ ++|+++|+||+|....... . . .... +++++|+||++ |.+|+
T Consensus 190 NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~ 268 (413)
T 3t18_A 190 NPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSH-TAYGL 268 (413)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHT-TCGGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccC-CCcCc
Confidence 999999875 55566666 8999999999986433221 0 0 1111 38889999999 55688
Q ss_pred eeeEEEEc--chhHHHHHHHhhhh----cCCCCCHHhHHHHHccccc---------HHHHHHHHHHHHHHHHHHHHhC
Q 022194 209 MAGVLAVK--GERLAKELYFLQNA----EGSGLAPFDCWICLRGVKT---------MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 209 ~~g~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
|.|++++. ++.+.+.+...... .....+...+.++...++. ..+.++++.++.+.+.+.|+++
T Consensus 269 riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 269 RSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp CCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999882 45565655443322 1234566666666555543 2234566777788888888875
No 91
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.92 E-value=6e-24 Score=191.33 Aligned_cols=255 Identities=15% Similarity=0.165 Sum_probs=165.1
Q ss_pred ceeeecCCCCCCCCccccCeeecceeec-CCC-CCCCCccccCC-CCch-HHHHHHHHHhhcCCC-ceEEecch-HHHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQ-PSA-TENGPYDYTRS-GNPT-RDALESLLAKLDKAD-RALCFTSG-MAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~-~~~-~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~ 84 (301)
..+++|+ .++|. ...+|.+....... ... .......|.+. |.+. ++++.+++.+.++.+ +.+++++| ++++.
T Consensus 56 ~~~i~l~-~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~ 133 (432)
T 3ei9_A 56 AQVISLG-IGDTT-EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDIS 133 (432)
T ss_dssp CCCEECS-SCCCC-SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred CCeEEcc-CCCCC-CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHH
Confidence 3689999 67776 33444444332111 110 01122345433 4333 555555554333543 45555555 68887
Q ss_pred HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC---------cEEEEecCCCHH----HHHhhcCCCceEEEEeCCCCC
Q 022194 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG---------VVVKRVNTCDLD----EVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g---------~~~~~~~~~d~~----~l~~~l~~~~~~v~i~~~~np 151 (301)
++..++++||+|++++|.|+++...+.. ....+ .+++.++.++.+ ++++ .+++++|++++|+||
T Consensus 134 ~l~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~v~l~~p~NP 210 (432)
T 3ei9_A 134 RLQVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST--VGRTDIIFFCSPNNP 210 (432)
T ss_dssp HHHHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG--CCCCSEEEEESSCTT
T ss_pred HHHHHcCCCCEEEEeCCCCHHHHHHHHH-cCCcccccccccccCceEEeccCcccCCcCChhh--CCCCCEEEEeCCCCC
Confidence 7788899999999999999999765432 22222 234555543221 2222 357899999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----cc----CCCCcEEEecccccccCCCCceeeEEEEcchh-
Q 022194 152 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGER- 219 (301)
Q Consensus 152 ~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~- 219 (301)
||.+.+ +++|+++|++||+++|+||+|+.+.... .. ..+.++++.|+||++ |.+|++.|+++++++.
T Consensus 211 tG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~r~G~~~~~~~~~ 289 (432)
T 3ei9_A 211 TGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYA-GFTGVRLGWTVIPKKLL 289 (432)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHH-CTTTTCCEEEECCTTCB
T ss_pred CCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhcc-CCcccceEEEEEChHHh
Confidence 999975 7778888999999999999998543321 11 124679999999999 6678899999998765
Q ss_pred ------HHHHHHHhhhhcCCCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 220 ------LAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 220 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.+.........+.++..+.++...+. .+.+.++++.++++.+.+.|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 290 YSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp CTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 25555554444455566666665555443 34667778888899999999876
No 92
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=1.3e-24 Score=195.32 Aligned_cols=217 Identities=15% Similarity=0.174 Sum_probs=155.5
Q ss_pred cccCC-CCch-HHHHHHHHHhhcC---CC-ceEEecc-hHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDK---AD-RALCFTS-GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~---~~-~~i~~~s-G~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
.|.+. |.+. ++++.+++.+.+| .+ +.+++++ |++++. ++..++++||+|++++|.|+++. ..++..|.
T Consensus 80 ~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~ 155 (425)
T 1vp4_A 80 QYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI----NAFRQYLA 155 (425)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCC
Confidence 34443 4443 6666666665557 33 4455544 578885 66667889999999999999987 44456788
Q ss_pred EEEEecCC----CHHHHHhhcCC--------CceEE-EEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 120 VVKRVNTC----DLDEVASAIGP--------WTKLV-WVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 120 ~~~~~~~~----d~~~l~~~l~~--------~~~~v-~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
+++.++.+ |++++++++++ ++++| ++++|+||||.+.+ +++|+++|+++|+++|+||+|+.+.+
T Consensus 156 ~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 235 (425)
T 1vp4_A 156 NFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRY 235 (425)
T ss_dssp EEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBC
T ss_pred EEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccC
Confidence 88887753 78999988865 68888 47899999999976 67899999999999999999986544
Q ss_pred cC-----c---cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc------
Q 022194 184 SR-----P---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------ 249 (301)
Q Consensus 184 ~~-----~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 249 (301)
.. . ...+.++++.|+||+++ +|+|.|+++++ +.+.+.+.........+.++..++++...++.
T Consensus 236 ~g~~~~~~~~~~~~~~~i~~~s~sK~~~--~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 312 (425)
T 1vp4_A 236 EGETVDPIFKIGGPERVVLLNTFSKVLA--PGLRIGMVAGS-KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQ 312 (425)
T ss_dssp SSCCCCCHHHHHCTTTEEEEEESTTTTC--GGGCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHH
T ss_pred CCCCCcCHHHhCCCCCEEEEeccccccc--cccceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHH
Confidence 21 1 12356899999999994 68899999987 45666555544444344566666555544432
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC
Q 022194 250 MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.++++.++++.+.+.|+++
T Consensus 313 ~~~~~~~~~~~~~~l~~~L~~~ 334 (425)
T 1vp4_A 313 LKPTIELYRRKRTVMLNALEEY 334 (425)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3455666778888888888763
No 93
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=1.4e-23 Score=189.14 Aligned_cols=208 Identities=16% Similarity=0.190 Sum_probs=149.9
Q ss_pred HHHHHHHHHhhcC------CCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcc-cCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDK------ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~------~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~-~~g~~~~~~~~~- 127 (301)
++++.+++.+..+ .+++++++||++|+. ++..++++||.|+++.|.|+++. ..+. ..|.+++.++.+
T Consensus 92 ~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~~g~~~~~~~~~~ 167 (435)
T 3piu_A 92 KKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFD----RDLKWRTGVEIVPIHCTS 167 (435)
T ss_dssp HHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH----HHTTTTTCCEEEEEECCG
T ss_pred HHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHH----HHHHHhcCCEEEEeeCCC
Confidence 4445555544333 346666777789986 66677899999999999999886 3444 678899888864
Q ss_pred ------CHHHHHhhcCC------CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccCc------
Q 022194 128 ------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP------ 186 (301)
Q Consensus 128 ------d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~~------ 186 (301)
|++++++++++ ++++|++++|+||||.+.+ +++|+++|++||+++|+||+|+.+.+...
T Consensus 168 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~ 247 (435)
T 3piu_A 168 SNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVM 247 (435)
T ss_dssp GGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHH
T ss_pred ccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHH
Confidence 78999998864 7899999999999999975 68899999999999999999986443211
Q ss_pred ---cC---------CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc------
Q 022194 187 ---LE---------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK------ 248 (301)
Q Consensus 187 ---~~---------~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------ 248 (301)
.+ .+.++++.|+||++ |.+|++.|+++++++.+.+.+...... ...++....++...++
T Consensus 248 ~~~~~~~~d~~~~~~~~~i~i~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~ 324 (435)
T 3piu_A 248 EVLKDRNCDENSEVWQRVHVVYSLSKDL-GLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQHLLSAMLSDKKLTK 324 (435)
T ss_dssp HHHHC-------CGGGGEEEEEESSSSS-CCGGGCEEEEEESCHHHHHHHHHHGGG--SCCCHHHHHHHHHHHHCHHHHH
T ss_pred HhccccccccccCCCCCEEEEEeeeccc-CCCceeEEEEEeCCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhcChHHHH
Confidence 01 23458999999999 556889999999777676655443332 2334444433333222
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 249 -TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 249 -~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.++++.++.+++.+.|++.
T Consensus 325 ~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 325 NYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23455677778888888888875
No 94
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.92 E-value=2.9e-24 Score=191.14 Aligned_cols=253 Identities=13% Similarity=0.052 Sum_probs=171.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHH-HH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~-~~ 87 (301)
..++||+++ ..++|.. +|.+........+ ...+.+..+..+.+++++++++++++.+++++++||++|+.. +.
T Consensus 36 ~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~---~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~ 111 (395)
T 3nx3_A 36 KKYLDFSSGIGVCALGYN-HAKFNAKIKAQVD---KLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMK 111 (395)
T ss_dssp CEEEESSHHHHTCTTCBS-CHHHHHHHHHHHT---TCSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCcHHhccCCCC-CHHHHHHHHHHHH---hccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHH
Confidence 468999844 4678874 4444433222211 122233333456799999999999998888899999999864 33
Q ss_pred hcc-------CCCCeEEEcCCCCccHHHHH---------hhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 88 HLL-------GTGEEIVAGDDLYGGTDRLL---------SRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 88 ~~~-------~~g~~Vlv~~~~y~~~~~~~---------~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
.+. .++++|++.+|.||++.... .......+..+..++.+|++++++++++++++|++++++|+
T Consensus 112 ~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~ 191 (395)
T 3nx3_A 112 TARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQGE 191 (395)
T ss_dssp HHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEESEECT
T ss_pred HHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeCccCC
Confidence 332 45799999999999874221 12223445677788888999999999988999999999999
Q ss_pred cccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 152 RQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 152 ~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
+|.+.+ +++|+++|++||+++|+||+|... ... .....+....+.|+||.+++ |++.|+++++++.+.+.
T Consensus 192 ~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~--G~~~G~~~~~~~~~~~~ 269 (395)
T 3nx3_A 192 GGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGC--GLSVGAFVINQKVASNS 269 (395)
T ss_dssp TSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTT--TSCCEEEEECHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccC--CCceEEEEEchhhhhhh
Confidence 999876 999999999999999999998732 221 11222333445578999954 67899999876542554
Q ss_pred HHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHH
Q 022194 224 LYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~ 269 (301)
+.......++..++..++++..+++.+ ++..++..++.+++++.|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~ 317 (395)
T 3nx3_A 270 LEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLD 317 (395)
T ss_dssp SCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 433333344566777777776666543 2334455555555555554
No 95
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=6.6e-23 Score=184.28 Aligned_cols=218 Identities=14% Similarity=0.173 Sum_probs=155.4
Q ss_pred cccCC-CCch-HHHHHHHHHhhcC----C--CceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDK----A--DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~----~--~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
.|... |.+. ++++.+++.+.+| . ++.+++++|++++. ++..++++||+|++++|.|+++.. .+....|
T Consensus 78 ~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~~g 154 (428)
T 1iay_A 78 NFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR---DLRWRTG 154 (428)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH---HTTTTTC
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH---HHHHhcC
Confidence 34433 4333 5555555555444 2 34455555568885 666778899999999999999862 2345678
Q ss_pred cEEEEecCC-------CHHHHHhhcC------CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcc
Q 022194 119 VVVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (301)
Q Consensus 119 ~~~~~~~~~-------d~~~l~~~l~------~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~ 182 (301)
.+++.++.+ |+++++++++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+.+.
T Consensus 155 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 234 (428)
T 1iay_A 155 VQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATV 234 (428)
T ss_dssp CEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGC
T ss_pred CEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccc
Confidence 899888753 7888988875 36899999999999999998 9999999999999999999998643
Q ss_pred ccC----c-c--CCC-------Cc--EEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcc
Q 022194 183 LSR----P-L--ELG-------AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (301)
Q Consensus 183 ~~~----~-~--~~~-------~d--i~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (301)
+.. . . ..+ .| +++.|+||++ |.+|+|.|+++++++.+.+.+..... ..+.++..+.++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~-g~~Glr~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~ 311 (428)
T 1iay_A 235 FDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM-GLPGFRVGIIYSFNDDVVNCARKMSS--FGLVSTQTQYFLAAM 311 (428)
T ss_dssp CSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS-SCGGGCEEEEEESCHHHHHHHHHHHT--TSCCCHHHHHHHHHH
T ss_pred cCCCCccCHHHhccccccccCCCCcEEEEecchhhc-CCCCceEEEEEeCCHHHHHHHHHHHh--cccCCHHHHHHHHHH
Confidence 321 1 1 111 45 8999999999 55788999999966666665554332 234566666665555
Q ss_pred ccc-------HHHHHHHHHHHHHHHHHHHHhC
Q 022194 247 VKT-------MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 247 l~~-------~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++. +.+.++++.++++++.+.|+++
T Consensus 312 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 312 LSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 543 2445667778888888888876
No 96
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.92 E-value=1e-23 Score=187.13 Aligned_cols=211 Identities=20% Similarity=0.284 Sum_probs=164.0
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...++++.++++++.++.+++++|++|+. ++..+ +++||+|+++.+.|+++. ..++..|.+++.++.+
T Consensus 37 ~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~ 112 (388)
T 1b9h_A 37 GDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSS----QAAQRLGAVTVPVDVDAATY 112 (388)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTC
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHH----HHHHHcCCEEEEEecCCCcC
Confidence 4568999999999999998999999999986 55666 789999999999999997 4446678888888753
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC---ccCCCCcEEEeccc--c
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSAT--K 200 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~---~~~~~~di~~~S~s--K 200 (301)
|++++++++++++++|+ |+||+|.+.++++|+++|+++|+++|+|++|+.+.... ....+ |+++.||| |
T Consensus 113 ~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~S~s~~K 188 (388)
T 1b9h_A 113 NLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATFSFQNGK 188 (388)
T ss_dssp CBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEEECCTTS
T ss_pred CCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEEEccCCC
Confidence 78999999988888877 89999999999999999999999999999998765432 11223 78888887 6
Q ss_pred cccCCCCceeeEEEEcchhH--HHHHHHhhhh-------------cCC--CCCHHhHHHHHcccccHHHHHHHHHHHHHH
Q 022194 201 FIAGHSDVMAGVLAVKGERL--AKELYFLQNA-------------EGS--GLAPFDCWICLRGVKTMALRVEKQQDNAQK 263 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~--~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (301)
+++|+ ++|+++++++.+ .+.+...... .+. .+++..++++...++.+.+..+++.+++++
T Consensus 189 ~l~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~ 265 (388)
T 1b9h_A 189 LMTAG---EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDERWTL 265 (388)
T ss_dssp SSCSS---SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCC---CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66442 579999887645 4444332211 011 245566666666777788888888899999
Q ss_pred HHHHHHhCCCcc
Q 022194 264 IAEFLASHPRVK 275 (301)
Q Consensus 264 l~~~l~~~~~v~ 275 (301)
+.+.|++++++.
T Consensus 266 l~~~L~~~~~~~ 277 (388)
T 1b9h_A 266 LSRLLGAIDGVV 277 (388)
T ss_dssp HHHHHHTSTTCE
T ss_pred HHHHhccCCCcc
Confidence 999999887654
No 97
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.92 E-value=2.4e-24 Score=190.46 Aligned_cols=199 Identities=19% Similarity=0.219 Sum_probs=151.0
Q ss_pred HHHHHHHHHhhcCC---CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHH
Q 022194 57 RDALESLLAKLDKA---DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVA 133 (301)
Q Consensus 57 ~~~l~~~l~~~~~~---~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~ 133 (301)
.+++++.+++++|. +++++++||++++.+++..+ +||+|++++|.|+++...+. .++..|.+++.+ .|+++++
T Consensus 60 ~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~-~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~l~ 135 (374)
T 2aeu_A 60 AEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL-KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGEIL 135 (374)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH-CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHHHH
T ss_pred HHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC-CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHHHH
Confidence 46777778888898 67788888899986444444 99999999999988765443 566778898888 6899999
Q ss_pred hhcCCCceE-EEEeCCCCCcc-ccccHHHHHHHHHHcCCEEEEeCCcCCccc---cC--ccCCCCcEEEecccccccCCC
Q 022194 134 SAIGPWTKL-VWVESPTNPRQ-QICDIRKIAEMAHAHGALLLVDNSIMSPVL---SR--PLELGADIVMHSATKFIAGHS 206 (301)
Q Consensus 134 ~~l~~~~~~-v~i~~~~np~G-~~~~l~~l~~l~~~~~~~li~D~~~~~~~~---~~--~~~~~~di~~~S~sK~~~g~~ 206 (301)
++ ++++++ |++++|+||+| ...++++|.++|+++|+++|+|++|+.+.. .. +...+.|++++|+||+++|+
T Consensus 136 ~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~- 213 (374)
T 2aeu_A 136 NK-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGP- 213 (374)
T ss_dssp TT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSC-
T ss_pred hc-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCc-
Confidence 88 778999 99999999999 888999999999999999999999876531 11 33457899999999998653
Q ss_pred CceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH-HHHHHHHHHHHHH
Q 022194 207 DVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA-LRVEKQQDNAQKI 264 (301)
Q Consensus 207 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~l 264 (301)
++|++++++ .+.+.+.......+...++..++++..+++.+. ++.+++.++++.+
T Consensus 214 --~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 269 (374)
T 2aeu_A 214 --RGGLLAGKK-ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNF 269 (374)
T ss_dssp --SCEEEEEEH-HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_pred --ceEEEEECH-HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 679988875 566666655555555667777766666655432 2445555555554
No 98
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.92 E-value=2.4e-24 Score=190.01 Aligned_cols=206 Identities=16% Similarity=0.195 Sum_probs=152.5
Q ss_pred HHHHHHHHHhhcC--CC-ceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 57 RDALESLLAKLDK--AD-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~--~~-~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
++++.+++.+.+| .+ +.+++++| ++++. ++..++++||+|++++|.|+++. ..++..|.+++.++.+
T Consensus 75 ~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~----~~~~~~g~~~~~v~~~~~~~ 150 (369)
T 3cq5_A 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHP----ILAKGTHTEFIAVSRGADFR 150 (369)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHH----HHHHHTTCEEEEEECCTTSS
T ss_pred HHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEecCCcCCC
Confidence 4455555554443 32 45555555 68885 66667899999999999999886 4455678888888753
Q ss_pred -CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-Cc----cCCC-CcEEEeccc
Q 022194 128 -DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RP----LELG-ADIVMHSAT 199 (301)
Q Consensus 128 -d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~----~~~~-~di~~~S~s 199 (301)
|++++++++++ ++++|++++|+||||.+.|++++.++++.+++++|+||+|+.+... .. ...+ .++++.|+|
T Consensus 151 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 230 (369)
T 3cq5_A 151 IDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMS 230 (369)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESS
T ss_pred CCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEech
Confidence 78999998876 8899999999999999999999999999999999999999866532 11 1235 679999999
Q ss_pred ccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc---cHHHHHHHHHHHHHHHHHHHHh
Q 022194 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 200 K~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
|++ |++|++.|++++++ .+.+.+..... ..+.++..++++...++ .+.+.++++.++++++.+.|++
T Consensus 231 K~~-~~~G~r~G~~~~~~-~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 300 (369)
T 3cq5_A 231 KAF-DFAGGRLGYFVANP-AFIDAVMLVRL--PYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEE 300 (369)
T ss_dssp STT-SCGGGCCEEEEECT-HHHHHHHTTSC--TTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred Hhc-CCcccceEEEEeCH-HHHHHHHHcCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999 55678899999975 45554443332 23466666666555554 3455667788888888888876
No 99
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.92 E-value=9.9e-24 Score=189.06 Aligned_cols=220 Identities=15% Similarity=0.151 Sum_probs=155.8
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
..|.+. |.+. ++++.+++.+..+.+ ++++++||++++. ++..++++||+|++++|.|+++. ..++..|.+
T Consensus 74 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~ 149 (418)
T 3rq1_A 74 VGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYR----VICSDTGRT 149 (418)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHH----HHHHHTTCE
T ss_pred CCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHH----HHHHHcCCE
Confidence 456665 6665 788888887777766 6667777789986 66778899999999999999986 555678889
Q ss_pred EEEecCC------CHHHHHhhcCC----Cce-EEEEeCC-CCCcccccc---HHHHHHHHH------HcCCEEEEeCCcC
Q 022194 121 VKRVNTC------DLDEVASAIGP----WTK-LVWVESP-TNPRQQICD---IRKIAEMAH------AHGALLLVDNSIM 179 (301)
Q Consensus 121 ~~~~~~~------d~~~l~~~l~~----~~~-~v~i~~~-~np~G~~~~---l~~l~~l~~------~~~~~li~D~~~~ 179 (301)
++.++.+ |++++++++++ +++ ++++++| +||||.+.+ +++|+++|+ ++|+++|+||+|.
T Consensus 150 ~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~ 229 (418)
T 3rq1_A 150 LVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYL 229 (418)
T ss_dssp EEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTG
T ss_pred EEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc
Confidence 9988852 78999988874 555 8888999 999999987 555666666 8999999999986
Q ss_pred CccccC---------ccCCCC---cEEEecccccccCCCCceeeEEEE--cchhHHHHHHHhhhh----cCCCCCHHhHH
Q 022194 180 SPVLSR---------PLELGA---DIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNA----EGSGLAPFDCW 241 (301)
Q Consensus 180 ~~~~~~---------~~~~~~---di~~~S~sK~~~g~~g~~~g~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~ 241 (301)
...... ...... .+++.|+||++ |.+|+|.|++++ +++.+.+.+...... .....+...+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (418)
T 3rq1_A 230 DYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF-TMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMR 308 (418)
T ss_dssp GGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTT-TCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHH
T ss_pred cccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCC-cCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHH
Confidence 433211 111112 38889999999 567889999988 245565655443322 12345566555
Q ss_pred HHHcccccH----------HHHHHHHHHHHHHHHHHHHhC
Q 022194 242 ICLRGVKTM----------ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 242 ~~~~~l~~~----------~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++...++.. .+.++++.++.+.+.+.|+++
T Consensus 309 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 309 TMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 554444331 234456677777788888764
No 100
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.92 E-value=7.2e-24 Score=188.27 Aligned_cols=210 Identities=16% Similarity=0.167 Sum_probs=159.6
Q ss_pred chHHHHHHHHHhhcCCC-c--eEEecchHHHHH-HHHhccCCCCeEEEcCCCCcc--HHHHHhhhcccCCcEEEEecC--
Q 022194 55 PTRDALESLLAKLDKAD-R--ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTPKTGVVVKRVNT-- 126 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~-~--~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~--~~~~~~~~~~~~g~~~~~~~~-- 126 (301)
+.++++++++++++|.+ + +++++||++|+. ++..++++||+|++++|.|++ +. ..++..|.+++.++.
T Consensus 67 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~~~g~~~~~v~~~~ 142 (393)
T 1vjo_A 67 ALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLV----DMAGRYGADVRTISKPW 142 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHH----HHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHH----HHHHHcCCceEEEecCC
Confidence 34889999999999876 3 455566679986 666678999999999999998 54 555677888888885
Q ss_pred ---CCHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccc
Q 022194 127 ---CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (301)
Q Consensus 127 ---~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~ 201 (301)
.|++++++++++ ++++|++++|+||||.+.|+++|+++|+++|+++|+||+|+.+... .....++|+++.|+||+
T Consensus 143 ~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~ 222 (393)
T 1vjo_A 143 GEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKG 222 (393)
T ss_dssp TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSST
T ss_pred CCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCccc
Confidence 378999999987 8999999999999999999999999999999999999999965433 22334689999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHh----h---------------hhcCC-CCCHHhHHHHHccccc-----HHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFL----Q---------------NAEGS-GLAPFDCWICLRGVKT-----MALRVEK 256 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~----~---------------~~~~~-~~~~~~~~~~~~~l~~-----~~~~~~~ 256 (301)
+++++ +.|+++++++ +.+.+... . ..... +.+.....++..+++. +.+.+++
T Consensus 223 l~~~~--~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~ 299 (393)
T 1vjo_A 223 LGCSP--GASPFTMSSR-AIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQR 299 (393)
T ss_dssp TCSCS--SCEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccCCC--ceEEEEECHH-HHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 97765 4699988754 44443211 0 01112 4555555555444443 3456678
Q ss_pred HHHHHHHHHHHHHhC
Q 022194 257 QQDNAQKIAEFLASH 271 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (301)
+.++++++.+.|++.
T Consensus 300 ~~~~~~~l~~~L~~~ 314 (393)
T 1vjo_A 300 HQKNVEYLWERLEDI 314 (393)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 888888999999875
No 101
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.92 E-value=9.6e-24 Score=186.37 Aligned_cols=210 Identities=20% Similarity=0.188 Sum_probs=165.5
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+..+++++.++++++.+++++++||++|+. ++..+ +++||+|+++.+.|+++.. .+...|.+++.++.+
T Consensus 35 ~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~ 110 (373)
T 3frk_A 35 GDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATAL----AVSYTGAKPIFVEPDIRTY 110 (373)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHH----HHHHHSCEEEEECEETTTT
T ss_pred CchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHH----HHHHcCCEEEEEecccccc
Confidence 3568999999999999999999999999986 66667 7899999999999999874 345668888888765
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEeccc--cc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KF 201 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~S~s--K~ 201 (301)
|++++++++++++++|+ ++||+|...|+++|.++|+++|+++|+|++|+.+........+ .|+++.||+ |+
T Consensus 111 ~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~ 187 (373)
T 3frk_A 111 NIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKN 187 (373)
T ss_dssp EECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred CcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcCCCc
Confidence 89999999998898888 6789999999999999999999999999999977654433344 799999977 99
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhc------------CCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAE------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~ 269 (301)
+++ .| .+|+++.+++.+.+.+....... ...+++..++.....++.+.+..++..++.+++.+.|+
T Consensus 188 l~~-~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 265 (373)
T 3frk_A 188 LGS-LG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGIN 265 (373)
T ss_dssp SCC-SS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCC
T ss_pred cCc-cc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 954 23 37899888777766655443321 12345666666555566677777788888888888887
Q ss_pred hCC
Q 022194 270 SHP 272 (301)
Q Consensus 270 ~~~ 272 (301)
+.+
T Consensus 266 ~~~ 268 (373)
T 3frk_A 266 NPN 268 (373)
T ss_dssp CTT
T ss_pred cCc
Confidence 765
No 102
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.92 E-value=2e-23 Score=185.28 Aligned_cols=211 Identities=14% Similarity=0.092 Sum_probs=155.4
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
..++++++++++++.+ ++++++||++++. ++..++++||+|+++++.|+++. +...++..|.+++.++.+
T Consensus 43 ~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~ 120 (392)
T 2z9v_A 43 LYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEAI 120 (392)
T ss_dssp HHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCCC
Confidence 3788999999999875 4555566689986 55666899999999999998773 234445567788877753
Q ss_pred CHHHHHhhc--CCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccC
Q 022194 128 DLDEVASAI--GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 d~~~l~~~l--~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (301)
|++++++++ .+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... .....+.|++++|+||+++|
T Consensus 121 d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~ 200 (392)
T 2z9v_A 121 DPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGA 200 (392)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCC
T ss_pred CHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccC
Confidence 789999998 457899999999999999999999999999999999999999876543 23334789999999998877
Q ss_pred CCCceeeEEEEcchhHHHHHHHhh--------------------hhcCCCCCHHhHHHHHccccc-----HHHHHHHHHH
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQ--------------------NAEGSGLAPFDCWICLRGVKT-----MALRVEKQQD 259 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~ 259 (301)
++|+ |++++++ .+.+.+.... .....+.+.....++..+++. +.+.+++..+
T Consensus 201 ~~g~--G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 277 (392)
T 2z9v_A 201 PPGL--TMMGVSE-RAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHAL 277 (392)
T ss_dssp CSCC--EEEEECH-HHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCce--eEEEECH-HHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 7775 8888875 4444443211 011123344333333333332 3456677788
Q ss_pred HHHHHHHHHHhC
Q 022194 260 NAQKIAEFLASH 271 (301)
Q Consensus 260 ~~~~l~~~l~~~ 271 (301)
+++++.+.|+++
T Consensus 278 ~~~~l~~~L~~~ 289 (392)
T 2z9v_A 278 TAKAMRAGVTAM 289 (392)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 888888888875
No 103
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.91 E-value=1.1e-23 Score=187.87 Aligned_cols=215 Identities=20% Similarity=0.129 Sum_probs=157.9
Q ss_pred chHHHHHHHHHhhcCCC--ceEEecchHHHHHHH-Hhc---cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAV-THL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~~-~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
+..+++++++++++|.+ +++++++|++++.++ ..+ +++||+|+++++.|+++...+....+..|.+++.++.+
T Consensus 69 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~ 148 (406)
T 3cai_A 69 AVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI 148 (406)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc
Confidence 44789999999999986 455555557888644 445 68999999999999988655544444468888888865
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccc
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~ 201 (301)
|++++++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... .....++|+++.|+||+
T Consensus 149 ~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~ 228 (406)
T 3cai_A 149 ETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAW 228 (406)
T ss_dssp TTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGG
T ss_pred ccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhh
Confidence 899999999989999999999999999999999999999999999999999876543 22345789999999998
Q ss_pred ccCCCCceee-EEEEcchhHHHHHHHhhh---------hcCCCCCHHhHHHHHcccc-------------------cHHH
Q 022194 202 IAGHSDVMAG-VLAVKGERLAKELYFLQN---------AEGSGLAPFDCWICLRGVK-------------------TMAL 252 (301)
Q Consensus 202 ~~g~~g~~~g-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~-------------------~~~~ 252 (301)
+ ||. +| ++++++ .+.+.+..... ....+.+.....++..+++ .+.+
T Consensus 229 ~-g~~---~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~ 303 (406)
T 3cai_A 229 G-GPP---IGAMVFRDP-SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQS 303 (406)
T ss_dssp T-SCS---CEEEEESCH-HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHH
T ss_pred c-CCC---cCeEEEEeh-HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHH
Confidence 7 543 56 888875 44443322211 1123334433322222221 2455
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc
Q 022194 253 RVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~v 274 (301)
..++..++++++.+.|++++++
T Consensus 304 ~~~~~~~~~~~l~~~L~~~~~~ 325 (406)
T 3cai_A 304 ADAYLNRVFDYLMVSLRSLPLV 325 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHHHHHHHhcCCCe
Confidence 6677788888999999887665
No 104
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.91 E-value=3.4e-23 Score=184.16 Aligned_cols=256 Identities=14% Similarity=0.097 Sum_probs=167.3
Q ss_pred ceeeecCCCC--CCCCcccc-CeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhcC----CC--ceEEecch
Q 022194 11 TLLMNFSNEF--DPYGALST-PLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLDK----AD--RALCFTSG 79 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~-p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~----~~--~~i~~~sG 79 (301)
..+++|+.+. |+.+..+. |.+....... .........|.+. |.+. ++++.+++.+..+ .+ ++++++||
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~-~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~ 104 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARL-NAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGG 104 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHH-HHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHH
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhh-ccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCc
Confidence 4689998432 44444332 2233221110 1111123455553 5544 6677777665544 33 44555666
Q ss_pred HHHHHHH---HhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC----C---CHHHHHhhcC---CCceEEEEe
Q 022194 80 MAALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----C---DLDEVASAIG---PWTKLVWVE 146 (301)
Q Consensus 80 ~~ai~~~---~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~----~---d~~~l~~~l~---~~~~~v~i~ 146 (301)
++++.++ .+++++||+|+++.|.|+++. ..++..|.+++.++. + |++++++.++ +++++++++
T Consensus 105 ~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~ 180 (397)
T 3fsl_A 105 SGALKVGADFLKRYFPESGVWVSDPTWENHV----AIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHP 180 (397)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEESSCCHHHH----HHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECS
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCchhHH----HHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeC
Confidence 7898644 456899999999999999986 455667888888887 2 8999999997 567899999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC----------ccCCCCcEEEecccccccCCCCceeeEE
Q 022194 147 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVL 213 (301)
Q Consensus 147 ~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~----------~~~~~~di~~~S~sK~~~g~~g~~~g~~ 213 (301)
+|+||||.+.+ +++|+++|+++|+++|+||+|+...+.. ....+.++++.|+||++ |++|+|.|++
T Consensus 181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~riG~~ 259 (397)
T 3fsl_A 181 CCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIF-SLYGERVGGL 259 (397)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCCEEE
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccc-cCcCCCeeEE
Confidence 99999999964 6789999999999999999998655431 11345679999999999 6778999999
Q ss_pred EE--cchhHHHHH-HHhh---hhcCCCCCHHhHHHHHcc----------cccHHHHHHHHHHHHHHHHHHHHhCC
Q 022194 214 AV--KGERLAKEL-YFLQ---NAEGSGLAPFDCWICLRG----------VKTMALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 214 ~~--~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
+. .++.+...+ .... .......+...+.++... .+.+.+.++++.++++.+.+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 260 SVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 75 333443322 2211 112222233333333222 22345667788888888999988753
No 105
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.91 E-value=1.9e-23 Score=184.70 Aligned_cols=213 Identities=13% Similarity=0.086 Sum_probs=158.2
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
..++++++++++|.+ ++++++||++++. ++..+. ++||+|+++++.|+++...+. .++..|.+++.++.+
T Consensus 46 ~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~ 124 (384)
T 1eg5_A 46 MEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVPVDSR 124 (384)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECCBCTT
T ss_pred HHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEccCCC
Confidence 688999999999876 5666677789986 455555 799999999999998865542 335568899888863
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC--CEEEEeCCcCCcccc-CccCCCCcEEEeccccc
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~--~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~ 201 (301)
|++++++++++++++|++++|+||||.+.|+++|.++|+++| +++|+|++|+.+... .....+.|+++.|+||+
T Consensus 125 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~ 204 (384)
T 1eg5_A 125 GVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKF 204 (384)
T ss_dssp SCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGG
T ss_pred CccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHh
Confidence 789999999989999999999999999999999999999999 999999999865432 22334789999999998
Q ss_pred ccCCCCceeeEEEEcchh-HHHHHHHh---hhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 202 IAGHSDVMAGVLAVKGER-LAKELYFL---QNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
+ |++| .|+++++++. +...+... ......+.+.....++..+++ .+.+.++++.++++++.+.|++ ++
T Consensus 205 ~-g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g 280 (384)
T 1eg5_A 205 H-GPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN-LG 280 (384)
T ss_dssp T-SCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT-TT
T ss_pred c-CCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-CC
Confidence 7 6766 4888887653 12111110 011223455555544444433 3456677888888899999987 44
Q ss_pred c
Q 022194 274 V 274 (301)
Q Consensus 274 v 274 (301)
+
T Consensus 281 ~ 281 (384)
T 1eg5_A 281 A 281 (384)
T ss_dssp C
T ss_pred e
Confidence 4
No 106
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.91 E-value=2e-23 Score=184.62 Aligned_cols=210 Identities=12% Similarity=0.109 Sum_probs=170.5
Q ss_pred CchHHHHHHHH-HhhcC-CCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 54 NPTRDALESLL-AKLDK-ADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 54 ~~~~~~l~~~l-~~~~~-~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+..+++++.+ ++++| .+++++++||++|+. ++..+ +++||+|+++++.|.++. ..+...|.+++.++.+
T Consensus 35 ~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~----~~~~~~G~~~~~v~~~~~ 110 (377)
T 3ju7_A 35 GPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATP----LAAIWCGLEPYFIDISID 110 (377)
T ss_dssp CHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHH----HHHHHTTCEEEEECBCTT
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHH----HHHHHcCCEEEEEecCCc
Confidence 36689999999 99999 788999999999986 56666 899999999999999986 4455778999888864
Q ss_pred ----CHHHHHhhc-CCC--ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCC---CCcEEEec
Q 022194 128 ----DLDEVASAI-GPW--TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLEL---GADIVMHS 197 (301)
Q Consensus 128 ----d~~~l~~~l-~~~--~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~---~~di~~~S 197 (301)
|++++++++ +++ +++|+ ++|++|...++++|.++|+ +|+++|+|++|+.+........ ..|+.+.|
T Consensus 111 ~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S 186 (377)
T 3ju7_A 111 DWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYS 186 (377)
T ss_dssp TCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEE
T ss_pred cCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEE
Confidence 889999988 555 88887 7788999999999999999 9999999999987765433223 26788887
Q ss_pred c--cccccCCCCceeeEEEEcchhHHHHHHHhhhh------------cCCCCCHHhHHHHHcccccHHHHHHHHHHHHHH
Q 022194 198 A--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQK 263 (301)
Q Consensus 198 ~--sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (301)
| +|++++ | .+|+++.+++.+.+++...... ....+++..++..+..++.+.++.++..+++++
T Consensus 187 ~~~~K~l~~--g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~ 263 (377)
T 3ju7_A 187 FHATKPFGI--G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEW 263 (377)
T ss_dssp CBTTSSSCC--B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCCCcCCC--C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 599964 3 4799998888887776655442 234567777888888888888899999999999
Q ss_pred HHHHHHhCCCc
Q 022194 264 IAEFLASHPRV 274 (301)
Q Consensus 264 l~~~l~~~~~v 274 (301)
+.+.|++++.+
T Consensus 264 ~~~~L~~~~~~ 274 (377)
T 3ju7_A 264 YKQLLQSNGLM 274 (377)
T ss_dssp HHHHHHHTTTT
T ss_pred HHHHhcCCCCc
Confidence 99999987643
No 107
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.91 E-value=7.5e-24 Score=188.31 Aligned_cols=211 Identities=15% Similarity=0.173 Sum_probs=155.2
Q ss_pred hHHHHHHHHHhhcCCC-c-eE-EecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-----
Q 022194 56 TRDALESLLAKLDKAD-R-AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----- 126 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~-~-~i-~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~----- 126 (301)
...++++.++++++.+ + .+ +++||++++. ++..++++||+|++++|.|+++. +...++..|.+++.++.
T Consensus 52 ~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 129 (396)
T 2ch1_A 52 TMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTIEGPPDRP 129 (396)
T ss_dssp HHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEecCCCCCC
Confidence 3788999999999876 3 35 4555679986 56667899999999999999873 22355677888888885
Q ss_pred CCHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccC
Q 022194 127 CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 127 ~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (301)
.|++++++++++ ++++|++++|+||||.+.|+++|+++|+++|+++|+|++|+.+... .....+.|+++.|++|++++
T Consensus 130 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~ 209 (396)
T 2ch1_A 130 FSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGA 209 (396)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCC
T ss_pred CCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccC
Confidence 378999999886 7999999999999999999999999999999999999999866543 22344679999999999888
Q ss_pred CCCceeeEEEEcchhHHHHHHHh-----------------h------hhcCCCCCHHhHHHHHcccc-----cHHHHHHH
Q 022194 205 HSDVMAGVLAVKGERLAKELYFL-----------------Q------NAEGSGLAPFDCWICLRGVK-----TMALRVEK 256 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~-----------------~------~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~ 256 (301)
++|+ |+++.++ .+.+.+... . .....+.+.....++..+++ .+.+.+++
T Consensus 210 ~~g~--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 286 (396)
T 2ch1_A 210 PPGI--TPISISP-KALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKR 286 (396)
T ss_dssp CSSC--EEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCCe--EEEEECH-HHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 7775 7888875 444433211 0 01112334444443333333 24556677
Q ss_pred HHHHHHHHHHHHHhC
Q 022194 257 QQDNAQKIAEFLASH 271 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (301)
..++++++.+.|+++
T Consensus 287 ~~~~~~~l~~~L~~~ 301 (396)
T 2ch1_A 287 RIECAQILYEGLGKM 301 (396)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC
Confidence 888888888888765
No 108
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.91 E-value=2.7e-24 Score=190.77 Aligned_cols=211 Identities=15% Similarity=0.054 Sum_probs=156.0
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhccCC-------------CCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGT-------------GEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~~~-------------g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
+++++++++++++.+ +++++++|++|+. ++..+..+ ||+|++++|.|+++. ..++..|.+
T Consensus 71 ~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~ 146 (397)
T 3f9t_A 71 EEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFE----KGREMMDLE 146 (397)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHH----HHHHHHTCE
T ss_pred HHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHH----HHHHHcCce
Confidence 678999999999876 4477777888885 55555554 999999999999987 444556889
Q ss_pred EEEecCC-----CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc----------
Q 022194 121 VKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---------- 184 (301)
Q Consensus 121 ~~~~~~~-----d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~---------- 184 (301)
++.++.+ |++++++++++ ++++|++++|+||||.+.|+++|+++|++||+++|+|++|+.+...
T Consensus 147 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~ 226 (397)
T 3f9t_A 147 YIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKG 226 (397)
T ss_dssp EEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTT
T ss_pred eEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccccccc
Confidence 9999876 89999999987 8999999999999999999999999999999999999999854331
Q ss_pred -----CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc---------C--CCCCHHhHHHHHccc-
Q 022194 185 -----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE---------G--SGLAPFDCWICLRGV- 247 (301)
Q Consensus 185 -----~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~l- 247 (301)
.... ++|+++.|+||+++++. +.|+++.+++.+.+.+....... + ...+....++++..+
T Consensus 227 ~~~~~~~~~-~~~~~~~s~~K~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 303 (397)
T 3f9t_A 227 VNYKFDFSL-GVDSITIDPHKMGHCPI--PSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG 303 (397)
T ss_dssp CCCCCSGGG-TCSEEECCTTTTTCCCS--SCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH
T ss_pred ccccccccc-cCCeEEEccccccCCCC--CceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh
Confidence 1122 78999999999985543 46888887766544322111110 1 111223333443333
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 248 -KTMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 248 -~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
..+.+..++..++++++.+.|+++ ++.
T Consensus 304 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 331 (397)
T 3f9t_A 304 REGQRKIVNECMENTLYLYKKLKEN-NFK 331 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 234567778888889999999887 443
No 109
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.91 E-value=3.7e-24 Score=190.24 Aligned_cols=252 Identities=14% Similarity=0.132 Sum_probs=170.5
Q ss_pred ceeeecCCCCC--CCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHH-HHH
Q 022194 11 TLLMNFSNEFD--PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVT 87 (301)
Q Consensus 11 ~~~~~~~~~~~--~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~ 87 (301)
..++||+++.. .+|. ++|.+........+ ...+.+..+..+.++++++++++++|.+++++++||++|+. ++.
T Consensus 36 ~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~---~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~ 111 (392)
T 3ruy_A 36 NRYMDLLSAYSAVNQGH-RHPKIINALIDQAN---RVTLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIK 111 (392)
T ss_dssp CEEEESSHHHHTCTTCB-TCHHHHHHHHHHHT---TCSCCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHH
T ss_pred CEEEEcCCChhhhccCC-CCHHHHHHHHHHHH---hccccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHH
Confidence 46888873211 2555 34544443222211 11111122234569999999999999888889999999986 444
Q ss_pred hccC----------CCCeEEEcCCCCccHHHHHhhhccc---------CCcEEEEecCCCHHHHHhhcCCCceEEEEeCC
Q 022194 88 HLLG----------TGEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 88 ~~~~----------~g~~Vlv~~~~y~~~~~~~~~~~~~---------~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~ 148 (301)
.+.. .+|+|++..+.|++........... ....+..++.+|++++++++++++++|+++++
T Consensus 112 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 191 (392)
T 3ruy_A 112 TARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPI 191 (392)
T ss_dssp HHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSS
T ss_pred HHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCc
Confidence 3332 2679999999998775433222111 11236667777999999999999999999999
Q ss_pred CCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccC--CCCcEEEecccccccCCCC-ceeeEEEEcc
Q 022194 149 TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLE--LGADIVMHSATKFIAGHSD-VMAGVLAVKG 217 (301)
Q Consensus 149 ~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~--~~~di~~~S~sK~~~g~~g-~~~g~~~~~~ 217 (301)
+||||.+.| +++|+++|++||+++|+||+|+.. ... .... ...|++ ++||+++| | +++|++++++
T Consensus 192 ~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--~~SK~l~g--G~~~~G~~~~~~ 267 (392)
T 3ruy_A 192 QGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY--ILGKALGG--GVFPISCAAANR 267 (392)
T ss_dssp BSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--TTSCCEEEEECH
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE--EEchhhhC--ChhhhEEEEECH
Confidence 999999998 999999999999999999999632 111 1111 234554 67899854 5 6789999875
Q ss_pred hhHHHHHHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 218 ERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.+.......+.+.++..++++...++.+ .+..+++.++++++.+.|+++
T Consensus 268 -~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 268 -DILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp -HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTC
T ss_pred -HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 44444433344445667777777777766654 345677788888899998876
No 110
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.91 E-value=5.3e-24 Score=186.83 Aligned_cols=252 Identities=14% Similarity=0.060 Sum_probs=166.8
Q ss_pred cCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCC-chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCC
Q 022194 16 FSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGN-PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTG 93 (301)
Q Consensus 16 ~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~-~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g 93 (301)
|. +|||+|...+|..........+... .......++. +...+++++++++++.+..+++++|++++. ++..++.+|
T Consensus 9 ~~-~~~~l~~~~~p~~~~~~~~~~~~~~-~~~~~~~y~~~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~g 86 (357)
T 3lws_A 9 FQ-QTTGQISGHGKRNVGVLKTAFAAVA-DEMASDQYGTGAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDET 86 (357)
T ss_dssp HH-TCSEESSBSSCCBHHHHHHHHTTSC-TTCBCEETTEETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HH-hhcccccCCCCCCHHHHHHHHHHhh-cccCcccccCChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcC
Confidence 55 8999999999988754322111100 0111112233 558999999999999998899999998875 666677888
Q ss_pred C--eEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhcCCCceEEEEeCCCCCc-ccccc---HHHHHH
Q 022194 94 E--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPR-QQICD---IRKIAE 163 (301)
Q Consensus 94 ~--~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~~~~~~v~i~~~~np~-G~~~~---l~~l~~ 163 (301)
| .|+++++.|...... .......|++++.++.+ |+++++++. ++++|++++|+||+ |.+.+ +++|++
T Consensus 87 d~~~vi~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~ 163 (357)
T 3lws_A 87 DNRTVAYHPLCHLEIHEQ-DGLKELHPIETILVGAADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISR 163 (357)
T ss_dssp TCCEEEECTTCHHHHSST-THHHHHSSCEEEECSCTTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHH
T ss_pred CCcEEEecccceeeeecc-chhhhccCcEEEEecCCCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHH
Confidence 8 566665554433210 01223448888888754 789998874 38999999999998 88774 899999
Q ss_pred HHHHcCCEEEEeCCcCC---ccccC---ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCC--C
Q 022194 164 MAHAHGALLLVDNSIMS---PVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--L 235 (301)
Q Consensus 164 l~~~~~~~li~D~~~~~---~~~~~---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~--~ 235 (301)
+|++||+++|+|++|.. ..... ....+.|+++.|+||++++|.| |+++.+ +.+.+.+.......+.. .
T Consensus 164 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g---g~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (357)
T 3lws_A 164 YCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAG---AILAGP-AAFCQTARIWKRRYGGDLIS 239 (357)
T ss_dssp HHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSC---EEEEEC-HHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCce---EEEEcC-HHHHHHHHHHHHHhcCCccc
Confidence 99999999999999861 11111 1123578889999999977654 787775 45666555444333322 1
Q ss_pred CHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcce
Q 022194 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~ 276 (301)
....+.+...+++...++.++..++++++.+.|++++++..
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 280 (357)
T 3lws_A 240 LYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGVHT 280 (357)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 22222333333443334445567788889999998877653
No 111
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.91 E-value=1.1e-23 Score=190.56 Aligned_cols=252 Identities=14% Similarity=0.118 Sum_probs=163.8
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCC-C-CCCCCccccCCCCchHHHHHHHHHhhc----CCC--ceEEecchHHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPS-A-TENGPYDYTRSGNPTRDALESLLAKLD----KAD--RALCFTSGMAA 82 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~-~-~~~~~~~y~~~g~~~~~~l~~~l~~~~----~~~--~~i~~~sG~~a 82 (301)
..+++|++ + +.+...+|.+......... . .......|.+. +...++++.+++++ +.+ +++++++++++
T Consensus 69 ~~~i~l~~-g-~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~a 144 (449)
T 3qgu_A 69 AKIISLGI-G-DTTEPLPKYIADAMAKAAAGLATREGYSGYGAE--QGQGALREAVASTFYGHAGRAADEIFISDGSKCD 144 (449)
T ss_dssp CCCEECSS-C-CCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTT--TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHH
T ss_pred CCEEEeeC-C-CCCCCCCHHHHHHHHHHHHhhccccCCCCCCCC--CCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHH
Confidence 46889984 3 3444355544433211111 0 00123345432 11445555555554 332 44445555688
Q ss_pred HHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE----------EEEecCCCHHHHHhhcC--CCceEEEEeCCCC
Q 022194 83 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV----------VKRVNTCDLDEVASAIG--PWTKLVWVESPTN 150 (301)
Q Consensus 83 i~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~----------~~~~~~~d~~~l~~~l~--~~~~~v~i~~~~n 150 (301)
+.++..++++||+|++++|.|+++...+ +..|.+ ++.++.++.+.+...+. +++++|++++|+|
T Consensus 145 l~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~N 220 (449)
T 3qgu_A 145 IARIQMMFGSKPTVAVQDPSYPVYVDTS----VMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNN 220 (449)
T ss_dssp HHHHHHHHCSSSCEEEEESCCTHHHHHH----HHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCT
T ss_pred HHHHHHHhCCCCEEEEcCCCChhHHHHH----HHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCC
Confidence 8766888999999999999999997443 344555 66776653322221111 5789999999999
Q ss_pred Ccccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----cc----CCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 151 PRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 151 p~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
|||.+.+ +++|+++|+++|+++|+||+|+...+.. .. ..+.++++.|+||++ |.+|++.|+++++++
T Consensus 221 PtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~ 299 (449)
T 3qgu_A 221 PTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYA-GFTGVRLGWTVVPKA 299 (449)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGG-TCTTCCCEEEECCTT
T ss_pred CCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhc-CCccceeEEEecCHH
Confidence 9999975 8889999999999999999998644321 11 134679999999999 667889999999865
Q ss_pred hHH-------HHHHHhhhhcCCCCCHHhHHHHHccccc-----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 219 RLA-------KELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 219 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+. ..+.........+.++..+.++...++. +.+.++++.++++++.+.|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 300 LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 432 1333333444445666666666555543 4566778888899999999876
No 112
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.91 E-value=3.8e-23 Score=187.01 Aligned_cols=255 Identities=14% Similarity=0.053 Sum_probs=166.3
Q ss_pred eeeecCCCCCCCCcccc-CeeecceeecCCC---CCCCCccccCC-CCch-HHHHHHHHHhhcCC-------CceEE--e
Q 022194 12 LLMNFSNEFDPYGALST-PLYQTATFKQPSA---TENGPYDYTRS-GNPT-RDALESLLAKLDKA-------DRALC--F 76 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~-p~~~~~~~~~~~~---~~~~~~~y~~~-g~~~-~~~l~~~l~~~~~~-------~~~i~--~ 76 (301)
..++|+ ...|+....+ ++..+..-..... .......|.+. |.+. ++++.+++ +|. +++++ +
T Consensus 50 ~~i~l~-~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~~~~~~~~~~i~~~~t 125 (448)
T 3meb_A 50 KKVNLG-VGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGKDSKAAQEGRIASCQS 125 (448)
T ss_dssp TCEEES-SCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCTTCHHHHTTCEEEEEE
T ss_pred CeEEee-cccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCCCccccCcCcEEEEEC
Confidence 468888 6677443333 4333221110001 11234455543 5443 44444444 243 34555 6
Q ss_pred cchHHHHHH---HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC---C-----CHHHHHhhcC---CCceE
Q 022194 77 TSGMAALAA---VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C-----DLDEVASAIG---PWTKL 142 (301)
Q Consensus 77 ~sG~~ai~~---~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~---~-----d~~~l~~~l~---~~~~~ 142 (301)
++|++|+.. +.+++.+||+|++++|.|..+...+...++..|.+++.++. + |++++++.++ +++++
T Consensus 126 ~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~ 205 (448)
T 3meb_A 126 LSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIF 205 (448)
T ss_dssp SHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEE
T ss_pred CcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEE
Confidence 677888843 45678899999999999999974443222267877777765 2 7899998887 45788
Q ss_pred EEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccCc-----------cCCCCcEEEecccccccCCCCc
Q 022194 143 VWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP-----------LELGADIVMHSATKFIAGHSDV 208 (301)
Q Consensus 143 v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~~-----------~~~~~di~~~S~sK~~~g~~g~ 208 (301)
+++++|+||||.+.+ +++|+++|+++|+++|+||+|....+... .....++++.|+||.| |++|+
T Consensus 206 v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~ 284 (448)
T 3meb_A 206 LFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNF-GLYGE 284 (448)
T ss_dssp EEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGG
T ss_pred EEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccC-CCccc
Confidence 889999999999976 66699999999999999999886544320 1223568899999999 66788
Q ss_pred eeeEE--EE--------cch----hHHHHHHHhhhhcCCCCCHHhHHHHHcccc----------cHHHHHHHHHHHHHHH
Q 022194 209 MAGVL--AV--------KGE----RLAKELYFLQNAEGSGLAPFDCWICLRGVK----------TMALRVEKQQDNAQKI 264 (301)
Q Consensus 209 ~~g~~--~~--------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~l 264 (301)
|.|++ ++ +++ .+.+.+...........+...+.++...+. .+.+.++++.++++.+
T Consensus 285 RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l 364 (448)
T 3meb_A 285 RIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLL 364 (448)
T ss_dssp CCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 66 544 444444443333334455555555444433 2455667788888889
Q ss_pred HHHHHhC
Q 022194 265 AEFLASH 271 (301)
Q Consensus 265 ~~~l~~~ 271 (301)
.+.|+++
T Consensus 365 ~~~L~~~ 371 (448)
T 3meb_A 365 HASLAKR 371 (448)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9988876
No 113
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.91 E-value=3.2e-23 Score=184.04 Aligned_cols=212 Identities=14% Similarity=0.179 Sum_probs=157.2
Q ss_pred chHHHHHHHHHhhcCCCc--eE-EecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC----
Q 022194 55 PTRDALESLLAKLDKADR--AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~--~i-~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~---- 126 (301)
+..+++++++++++|.+. .+ +++||++|+. ++..++++||+|++++|.|+++. +...++..|.+++.++.
T Consensus 52 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 129 (393)
T 2huf_A 52 KIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVVKSKVGQ 129 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEEeCCCCC
Confidence 347899999999999763 45 5566689986 56667899999999999998852 22445667888888885
Q ss_pred -CCHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccccc
Q 022194 127 -CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 127 -~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (301)
.|++++++++++ ++++|++++|+||||.+.|+++|+++|+++|+++|+|++++.+... .....++|+++.|+||+++
T Consensus 130 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~ 209 (393)
T 2huf_A 130 SLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLG 209 (393)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTC
T ss_pred CCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccc
Confidence 378999999987 8999999999999999999999999999999999999999876543 2334578999999999987
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhh----h-h---------cC---------CCCCHHhHHHHHccccc-----HHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQ----N-A---------EG---------SGLAPFDCWICLRGVKT-----MALRVE 255 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~----~-~---------~~---------~~~~~~~~~~~~~~l~~-----~~~~~~ 255 (301)
|++|+ |++++++ .+.+.+.... . . .+ .+.+.....++..+++. +.+..+
T Consensus 210 g~~G~--G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 286 (393)
T 2huf_A 210 APPGI--TPVSFSH-RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIA 286 (393)
T ss_dssp CCSSC--EEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCCe--EEEEECH-HHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 88876 8888874 4555544320 0 0 00 12333333333323332 455667
Q ss_pred HHHHHHHHHHHHHHhC
Q 022194 256 KQQDNAQKIAEFLASH 271 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~ 271 (301)
+..++++++.+.|+++
T Consensus 287 ~~~~~~~~l~~~L~~~ 302 (393)
T 2huf_A 287 RHEDCAKRLYRGLQDA 302 (393)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 7888888899998875
No 114
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.91 E-value=1.1e-23 Score=186.16 Aligned_cols=216 Identities=15% Similarity=0.110 Sum_probs=157.1
Q ss_pred chHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC
Q 022194 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~ 127 (301)
+..+++++++++++|.+ ++++++||++|+. ++..+. ++||+|+++++.|+++...+. .++..|.+++.++.+
T Consensus 43 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~ 121 (382)
T 4eb5_A 43 EAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIPVG 121 (382)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEEEeccC
Confidence 34789999999999986 4556667789986 555555 799999999999998875553 344578899988863
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccc
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~ 201 (301)
|++++++++++++++|++++++||||.+.|+++|+++|+++|++ |+|++|+.+... .....+.|+++.|+||+
T Consensus 122 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~ 200 (382)
T 4eb5_A 122 KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDI 200 (382)
T ss_dssp TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGG
T ss_pred CCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHh
Confidence 79999999988899999999999999999999999999999999 999999866443 22223689999999998
Q ss_pred ccCCCCceeeEEEEcchh-HHHHHHH---hhhhcCCCCCHHhHHHHHccccc----HHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 202 IAGHSDVMAGVLAVKGER-LAKELYF---LQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
+ |++| .|+++++++. +...... .......+.+.....++..+++. +.+.++++.++++++.+.|+++++
T Consensus 201 ~-g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 277 (382)
T 4eb5_A 201 Y-GPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEE 277 (382)
T ss_dssp T-CCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred c-CCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 6 6766 3777777653 2111000 01112233344433333333332 455667788888889999988766
Q ss_pred cc
Q 022194 274 VK 275 (301)
Q Consensus 274 v~ 275 (301)
+.
T Consensus 278 ~~ 279 (382)
T 4eb5_A 278 SY 279 (382)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 115
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.91 E-value=8.8e-24 Score=188.53 Aligned_cols=250 Identities=17% Similarity=0.146 Sum_probs=172.7
Q ss_pred ceeeecCCCC---CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHH-H
Q 022194 11 TLLMNFSNEF---DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-V 86 (301)
Q Consensus 11 ~~~~~~~~~~---~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~-~ 86 (301)
..++||. ++ +++|. ++|.+......... ...+.+..+..+...+++++++++++.+++++++||++|+.+ +
T Consensus 39 ~~~lD~~-~~~~~~~lg~-~~p~v~~a~~~~~~---~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al 113 (406)
T 4adb_A 39 KEYIDFA-GGIAVNALGH-AHPELREALNEQAS---KFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAAL 113 (406)
T ss_dssp CEEEESS-HHHHTCTTCB-TCHHHHHHHHHHHT---TCSCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHH
T ss_pred CEEEECC-CchhhcccCC-CCHHHHHHHHHHHH---hcccccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHH
Confidence 3689998 55 88998 45555543322211 111111223456689999999999999988889999999864 4
Q ss_pred HhccC-------CC-CeEEEcCCCCccHHHHHhhhc---------ccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 87 THLLG-------TG-EEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 87 ~~~~~-------~g-~~Vlv~~~~y~~~~~~~~~~~---------~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
..+.. +| |+|++.+|.|+++........ ...+..+..++..|++++++++++++++|+++ |+
T Consensus 114 ~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p~ 192 (406)
T 4adb_A 114 KLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE-PI 192 (406)
T ss_dssp HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-SE
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-CC
Confidence 44433 55 999999999998853322211 22235677788789999999999899999999 99
Q ss_pred CCccccc-----cHHHHHHHHHHcCCEEEEeCCcCCccc-cCc-----cCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 150 NPRQQIC-----DIRKIAEMAHAHGALLLVDNSIMSPVL-SRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 150 np~G~~~-----~l~~l~~l~~~~~~~li~D~~~~~~~~-~~~-----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
||+|.+. ++++|+++|++||+++|+||+|+.... ... .....|++ |+||+++ +|++.|++++++
T Consensus 193 np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~--~G~r~G~~~~~~- 267 (406)
T 4adb_A 193 QGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG--GGFPVGALLATE- 267 (406)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEECH-
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc--CCCCeEEEEEcH-
Confidence 9999764 599999999999999999999973211 111 12234555 6899995 468899998874
Q ss_pred hHHHHHHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 219 RLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.+.......+.+.++..+.++...++.+ .+..+++.++++++.+.|++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 268 ECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp HHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 45454433333444566777777766665543 556677777778888877653
No 116
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.91 E-value=6.8e-24 Score=185.66 Aligned_cols=244 Identities=16% Similarity=0.167 Sum_probs=167.7
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~~~~ 88 (301)
..+++|++..++++ .+|.+...... .. .....|. .+...+++++++++++.+ +++++++|++++.++..
T Consensus 15 ~~~id~~~~~~~~~--~~~~v~~a~~~--~~--~~~~~y~---~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~ 85 (350)
T 3fkd_A 15 SEIVNFSTTVWTDG--DKDHLEKHLVE--NL--NCIRHYP---EPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQ 85 (350)
T ss_dssp -CCEECSCCSCCCS--CCHHHHHHHHH--TG--GGGGSCC---CTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHH
T ss_pred ccEEEccCCCCCCC--CCHHHHHHHHH--hH--hHHhcCC---CCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 57899995556666 44544433211 11 1122232 333368999999999875 45555555799975555
Q ss_pred ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 022194 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~ 167 (301)
.+. ||+|+++.|.|+++. ..++..|.+++.++. ++.+.+.. +++++|++++|+||||.+.++++|.++++.
T Consensus 86 ~l~-gd~Vi~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 157 (350)
T 3fkd_A 86 AFR-GSRSLIAIPSFAEYE----DACRMYEHEVCFYPSNEDIGEADF---SNMDFCWLCNPNNPDGRLLQRTEILRLLND 157 (350)
T ss_dssp HTT-TCEEEEEESCCHHHH----HHHHHTTCEEEEEETTSCGGGSCC---TTCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred HHC-CCEEEEeCCCcHHHH----HHHHHcCCeEEEEecCCccccCcc---CCCCEEEEeCCCCCcCCCCCHHHHHHHHHh
Confidence 444 999999999999886 555678999999997 54343322 688999999999999999999999999988
Q ss_pred cC-CEEEEeCCcCCccccC------ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhH
Q 022194 168 HG-ALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (301)
Q Consensus 168 ~~-~~li~D~~~~~~~~~~------~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
++ .++|+||+|+...... ....+.++++.|+||++ |++|++.|+++++ +.+.+.+..... .++.++..+
T Consensus 158 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~--~~~~~~~~~ 233 (350)
T 3fkd_A 158 HPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAY-GIPGLRIGYIVAN-KDFMKRVAAFST--PWAVNALAI 233 (350)
T ss_dssp CTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHH-SCGGGCCEEEECC-HHHHHHHHTTCC--TTCSCHHHH
T ss_pred CCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhc-cCcchheEeEEeC-HHHHHHHHHhCC--CCCCCHHHH
Confidence 76 7999999997544321 11345679999999999 5567899999984 566665554433 345566665
Q ss_pred HHHHccccc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 241 WICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 241 ~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.++...++. +.++.++..++++++.+.|++++++.
T Consensus 234 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 271 (350)
T 3fkd_A 234 EAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVE 271 (350)
T ss_dssp HHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 555444332 22333444588888999998887654
No 117
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.91 E-value=5.5e-23 Score=183.85 Aligned_cols=220 Identities=15% Similarity=0.155 Sum_probs=150.0
Q ss_pred cccCC-CCch-HHHHHHHHHhhcC----CCceEE--ecchHHHHHHH---HhccCCCCeEEEcCCCCccHHHHHhhhccc
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDK----ADRALC--FTSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~----~~~~i~--~~sG~~ai~~~---~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~ 116 (301)
.|.+. |.+. ++++.+++.+.++ .+++++ +++|++++.++ .+.+.+||+|++++|.|+++. ..++.
T Consensus 68 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~----~~~~~ 143 (412)
T 1yaa_A 68 EYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHM----AIFEN 143 (412)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHH----HHHHT
T ss_pred CCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHH----HHHHH
Confidence 45443 4443 6666666654433 345666 66678888644 455679999999999999987 44456
Q ss_pred CCcEEEEecC-C------CHHHHHhhcCCC---ceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 117 TGVVVKRVNT-C------DLDEVASAIGPW---TKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 117 ~g~~~~~~~~-~------d~~~l~~~l~~~---~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
.|.+++.++. + |++++++++++. +.++++++|+||||.+.+ +++|+++|+++|+++|+||+|....+
T Consensus 144 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 223 (412)
T 1yaa_A 144 QGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFAT 223 (412)
T ss_dssp TTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSS
T ss_pred cCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccC
Confidence 7888888776 2 789999888642 445555999999999975 67899999999999999999965433
Q ss_pred cC------cc-----CCC---CcEEEecccccccCCCCceeeEEE--E----cchh----HHHHHHHhhhhcCCCCCHHh
Q 022194 184 SR------PL-----ELG---ADIVMHSATKFIAGHSDVMAGVLA--V----KGER----LAKELYFLQNAEGSGLAPFD 239 (301)
Q Consensus 184 ~~------~~-----~~~---~di~~~S~sK~~~g~~g~~~g~~~--~----~~~~----~~~~~~~~~~~~~~~~~~~~ 239 (301)
.. +. ... .++++.|+||++ |++|+|.|+++ + +++. +.+.+.........+.+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 302 (412)
T 1yaa_A 224 GDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNA-GMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYG 302 (412)
T ss_dssp SCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTS-CCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHH
T ss_pred CcccchhHHHHHHHhcCCCCcceEEEeccCCCC-CCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHH
Confidence 21 11 122 578999999999 67789999998 6 2344 55544443333233445555
Q ss_pred HHHHHcccc----------cHHHHHHHHHHHHHHHHHHHHhCC
Q 022194 240 CWICLRGVK----------TMALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 240 ~~~~~~~l~----------~~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
+.++...++ .+.+.++++.++++.+.+.|+++.
T Consensus 303 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 303 AKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 555444433 344556677778888888887754
No 118
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.91 E-value=1.2e-23 Score=185.58 Aligned_cols=216 Identities=15% Similarity=0.111 Sum_probs=158.4
Q ss_pred chHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc----CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC
Q 022194 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~----~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~ 127 (301)
+..++++++++++++.+ +++++++|++++. ++..+. ++||+|+++++.|+++...+. .++..|++++.++.+
T Consensus 43 ~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~ 121 (382)
T 4hvk_A 43 EAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIPVG 121 (382)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcCCEEEEeccC
Confidence 34779999999999986 3555666678886 555565 899999999999999876553 335678999998875
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEeccccc
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKF 201 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK~ 201 (301)
|++++++++++++++|++++++||||.+.|+++|+++|+++|+ +|+|++|+.+.... ....++|+++.|+||+
T Consensus 122 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~ 200 (382)
T 4hvk_A 122 KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDI 200 (382)
T ss_dssp TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGG
T ss_pred CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHh
Confidence 8999999999999999999999999999999999999999999 99999998776542 2334789999999997
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHH----hhhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYF----LQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
+ |+.| .|+++.+++........ .......+.+......+..+++ .+.+..++..++++++.+.|+++++
T Consensus 201 ~-g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 277 (382)
T 4hvk_A 201 Y-GPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEE 277 (382)
T ss_dssp T-SCTT--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred c-CCCc--eEEEEEcCccCcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6 6666 47776665431110000 0111123334444444433333 3456667788888889999988776
Q ss_pred cc
Q 022194 274 VK 275 (301)
Q Consensus 274 v~ 275 (301)
+.
T Consensus 278 ~~ 279 (382)
T 4hvk_A 278 SY 279 (382)
T ss_dssp EE
T ss_pred eE
Confidence 54
No 119
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=7e-23 Score=179.03 Aligned_cols=208 Identities=13% Similarity=0.064 Sum_probs=152.8
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
...++++++++++|.+ ++++++||++++. ++..++++||+|+++++.|+++. +...++..|.+++.++.+
T Consensus 35 ~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~ 112 (352)
T 1iug_A 35 VFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDTP 112 (352)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCCC
T ss_pred HHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCCC
Confidence 3688999999999986 4555667789986 66667899999999999999875 234556678888888864
Q ss_pred CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc--CCEEEEeCCcCCcccc-CccCCCCcEEEecccccccC
Q 022194 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~--~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (301)
|++++++ +++++|++++++||||.+.|+++|.++|+++ |+++|+|++|+.+... .....+.|++++|+||++++
T Consensus 113 d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~ 189 (352)
T 1iug_A 113 RPEDVAK---EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMC 189 (352)
T ss_dssp CTTTSCC---SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCC
T ss_pred CHHHHhc---cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccC
Confidence 5666665 5789999999999999999999999999999 9999999999866543 22334789999999998777
Q ss_pred CCCceeeEEEEcchhHHHH---------HH----Hh-hhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHH
Q 022194 205 HSDVMAGVLAVKGERLAKE---------LY----FL-QNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAE 266 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~---------~~----~~-~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~ 266 (301)
+.| .|+++++++.+ +. +. .. ......+.+.....++..+++ .+.+.++++.++++++.+
T Consensus 190 ~~g--~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~ 266 (352)
T 1iug_A 190 PPG--LGFVALSPRAL-ERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYG 266 (352)
T ss_dssp CSC--EEEEEECHHHH-HTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHH
T ss_pred CCc--eeEEEECHHHH-HHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766 48888875543 22 11 11 112223444444333333322 256677888888899999
Q ss_pred HHHhC
Q 022194 267 FLASH 271 (301)
Q Consensus 267 ~l~~~ 271 (301)
.|+++
T Consensus 267 ~L~~~ 271 (352)
T 1iug_A 267 VGEEG 271 (352)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 99876
No 120
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.91 E-value=2.1e-23 Score=184.93 Aligned_cols=211 Identities=14% Similarity=0.190 Sum_probs=158.1
Q ss_pred hHHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 56 TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
...+++++++++++.+ ++++++||++++. ++..++++||+|+++.+.|++.. +...++..|.+++.++.+
T Consensus 57 ~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~ 134 (393)
T 3kgw_A 57 IMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPGEH 134 (393)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCC
Confidence 4788999999999876 2455677788885 66778999999999988875431 235566778888888753
Q ss_pred -CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccC
Q 022194 128 -DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 -d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (301)
|++++++++++ ++++|++++|+||||.+.|+++|.++|++||+++|+|++++.+... .....+.|+++.|+||+++|
T Consensus 135 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~ 214 (393)
T 3kgw_A 135 YTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNA 214 (393)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCC
T ss_pred CCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccC
Confidence 89999999987 8999999999999999999999999999999999999999866543 33455789999999998877
Q ss_pred CCCceeeEEEEcchhHHHHHHHhhh-----------------------hcCCCCCHHhHHHHHccccc-----HHHHHHH
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQN-----------------------AEGSGLAPFDCWICLRGVKT-----MALRVEK 256 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~-----~~~~~~~ 256 (301)
+.| .|+++++++ +.+.+..... ....+.+.....++..+++. +.+..++
T Consensus 215 ~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 291 (393)
T 3kgw_A 215 PPG--ISLISFNDK-AKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRR 291 (393)
T ss_dssp CSS--CEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCc--eeEEEECHH-HHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 776 588888754 4444432111 01123344444444344332 4666778
Q ss_pred HHHHHHHHHHHHHhC
Q 022194 257 QQDNAQKIAEFLASH 271 (301)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (301)
..++++++.+.|+++
T Consensus 292 ~~~~~~~l~~~L~~~ 306 (393)
T 3kgw_A 292 HREATAHLHKHLQEM 306 (393)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 888888999999876
No 121
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.91 E-value=7.3e-23 Score=182.98 Aligned_cols=212 Identities=14% Similarity=0.137 Sum_probs=159.4
Q ss_pred chHHHHHHHHHhhcCCCc--eE-EecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 55 PTRDALESLLAKLDKADR--AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~--~i-~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
+..++++++++++++.+. .+ +++||++++. ++..++++||+|+++++.|++.. +...++..|.+++.++.+
T Consensus 44 ~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 121 (416)
T 3isl_A 44 GIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWGT 121 (416)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCCC
Confidence 348899999999999863 33 4566778885 66678999999999999998732 235667788999998876
Q ss_pred --CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEeccccccc
Q 022194 128 --DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 --d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (301)
|+++++++++ +++++|++++++||||.+.|+++|+++|+++|+++|+|++|+.+... .....++|+++.|+||+++
T Consensus 122 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~ 201 (416)
T 3isl_A 122 VFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLS 201 (416)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTC
T ss_pred CCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccC
Confidence 8999999998 58999999999999999999999999999999999999999877654 3445678999999999877
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhh-------------------------------------h-hcCCCCCHHhHHHHHc
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQ-------------------------------------N-AEGSGLAPFDCWICLR 245 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~-------------------------------------~-~~~~~~~~~~~~~~~~ 245 (301)
|+.| .|+++.+++ +.+.+.... . ....+.+.....++..
T Consensus 202 g~~g--~g~~~~~~~-~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 278 (416)
T 3isl_A 202 VPSG--MAPITYNER-VADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALRE 278 (416)
T ss_dssp CCSS--EEEEEECHH-HHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHH
T ss_pred CCCC--eEEEEECHH-HHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHH
Confidence 7766 588887754 444433210 0 0112334444433333
Q ss_pred cccc-----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 246 GVKT-----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 246 ~l~~-----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+++. +.+..++..++++++.+.|++.
T Consensus 279 al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 309 (416)
T 3isl_A 279 GVRLVLEEGLETRFERHRHHEAALAAGIKAM 309 (416)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 3332 4566777888888898888874
No 122
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.91 E-value=1.7e-22 Score=179.41 Aligned_cols=211 Identities=20% Similarity=0.255 Sum_probs=163.8
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...++++.++++++.++.+++++|++|+. ++..+ +++||+|+++++.|+++.. .+...|.+++.++.+
T Consensus 55 ~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~ 130 (391)
T 3dr4_A 55 GRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASAN----SVTYCGATPVLVDNDPRTF 130 (391)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHH----HHHHCCCEEEEEecCcccc
Confidence 3558999999999999999999999999985 56666 7899999999999999874 445678888888865
Q ss_pred --CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEeccc--cc
Q 022194 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KF 201 (301)
Q Consensus 128 --d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~S~s--K~ 201 (301)
|++++++++++++++|+ ++||||...++++|+++|+++|+++|+|++|+.+........+ .|+++.||+ |+
T Consensus 131 ~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~ 207 (391)
T 3dr4_A 131 NLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAI 207 (391)
T ss_dssp SBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSS
T ss_pred CcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCc
Confidence 78999999998888888 5789999999999999999999999999999976654322222 478888866 99
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhcC--------------CCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEG--------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 267 (301)
+++ | ++|+++.+++.+.+.+........ ..+....++.....++.+.+..++..++++++.+.
T Consensus 208 l~~--g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~ 284 (391)
T 3dr4_A 208 ITT--G-EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQK 284 (391)
T ss_dssp SCC--B-SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CCc--C-CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 854 2 478888887777666554432211 23455555555555566777778888888899999
Q ss_pred HHhCCCcc
Q 022194 268 LASHPRVK 275 (301)
Q Consensus 268 l~~~~~v~ 275 (301)
|++. ++.
T Consensus 285 L~~~-g~~ 291 (391)
T 3dr4_A 285 LARL-GNR 291 (391)
T ss_dssp HGGG-TTS
T ss_pred hhcC-Ccc
Confidence 9876 443
No 123
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.90 E-value=5.9e-23 Score=183.33 Aligned_cols=211 Identities=10% Similarity=0.114 Sum_probs=158.4
Q ss_pred hHHHHHHHHHhhcCCCc---eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 56 TRDALESLLAKLDKADR---ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~---~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
..++++++++++++.+. .++++||++++. ++..++++||+|+++++.|++.. +...++..|.+++.++.+
T Consensus 47 ~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 124 (411)
T 3nnk_A 47 YMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGEV 124 (411)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCCC
Confidence 37889999999998763 344456788885 66778999999999999998731 125566778899988876
Q ss_pred -CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccccC
Q 022194 128 -DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 -d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (301)
|++++++++++ ++++|++++|+||||.+.|+++|+++|++||+++|+|++++.+... .....++|+++.|+||++++
T Consensus 125 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~ 204 (411)
T 3nnk_A 125 FTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGG 204 (411)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCC
T ss_pred CCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCC
Confidence 89999999985 8999999999999999999999999999999999999999876653 34455789999999999777
Q ss_pred CCCceeeEEEEcchhHHHHHHHhh------------------------------------hhcCCCCCHHhHHHHHcccc
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQ------------------------------------NAEGSGLAPFDCWICLRGVK 248 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~l~ 248 (301)
+.| .|+++.+++ +.+.+.... .....+.+.....++..+++
T Consensus 205 ~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 281 (411)
T 3nnk_A 205 PSG--TSPITLSAR-MEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECAR 281 (411)
T ss_dssp CSS--EEEEEECHH-HHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH
T ss_pred CCc--eEEEEECHH-HHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHH
Confidence 765 588888754 444443321 00112334444433333333
Q ss_pred c-----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 249 T-----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 249 ~-----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
. +.+..++..++++++.+.|++.
T Consensus 282 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 309 (411)
T 3nnk_A 282 LILQEGLDYGIARHKLHGDALVKGIQAM 309 (411)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 2 4566677888888898888875
No 124
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.90 E-value=8.7e-23 Score=183.47 Aligned_cols=207 Identities=15% Similarity=0.075 Sum_probs=150.1
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHH--H-HHHhccC--C----------CCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAAL--A-AVTHLLG--T----------GEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai--~-~~~~~~~--~----------g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..++++.++++++.+ +.+++++| ++++ . ++..+++ | ||+|++++|.|+.+. ..++..|.
T Consensus 80 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~----~~~~~~g~ 155 (427)
T 3ppl_A 80 IVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF----SITERFGF 155 (427)
T ss_dssp CHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH----HHHHHTTC
T ss_pred cHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHH----HHHHHcCC
Confidence 466777777777765 45555555 6888 3 4455566 6 899999999999987 55567788
Q ss_pred EEEEecCC----CHHHHHhhcC-CCceEEEEe-CCCCCccccccHH---HHHHHH-HHcCCEEEEeCCcCCccccC----
Q 022194 120 VVKRVNTC----DLDEVASAIG-PWTKLVWVE-SPTNPRQQICDIR---KIAEMA-HAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 120 ~~~~~~~~----d~~~l~~~l~-~~~~~v~i~-~~~np~G~~~~l~---~l~~l~-~~~~~~li~D~~~~~~~~~~---- 185 (301)
+++.++.+ |+++++++++ +++++|+++ +++||||.+.+.+ +|+++| +++|+++|+||+|+...+..
T Consensus 156 ~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~ 235 (427)
T 3ppl_A 156 EMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPE 235 (427)
T ss_dssp EEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCC
T ss_pred EEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCC
Confidence 88888764 8999999995 678888866 8899999998755 888888 99999999999998643321
Q ss_pred ---c-------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc------
Q 022194 186 ---P-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------ 249 (301)
Q Consensus 186 ---~-------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 249 (301)
. ...+.+++++||||++ + +|++.|+++++ +.+.+.+.......+...+...+.++...++.
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~S~SK~~-~-~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 312 (427)
T 3ppl_A 236 VIDIVGLGEAAGNPNRFWAFTSTSKIT-L-AGAGVSFFLTS-AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRA 312 (427)
T ss_dssp CCCHHHHHHHTTCTTSEEEEEESTTTS-C-TTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHH
T ss_pred ccchhhhhhccCCCCcEEEEechhhcc-C-cCccEEEEEcC-HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHH
Confidence 0 1346789999999993 4 47899999987 45666666666655666666665555444433
Q ss_pred -HHHHHHHHHHHHHHHHHHHHh
Q 022194 250 -MALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 250 -~~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.+.++.+.++.+.+.+.|++
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~ 334 (427)
T 3ppl_A 313 VMRKHAASLAPKFNKVLEILDS 334 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 334445566666666666654
No 125
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.90 E-value=2.8e-22 Score=179.64 Aligned_cols=213 Identities=20% Similarity=0.224 Sum_probs=161.2
Q ss_pred CCch-HHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 53 GNPT-RDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 53 g~~~-~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
|.+. ++++++.+++++|.++.+++++|++|+. ++..+ +++||+|+++.|.|+++.. .+...|.+++.++.+
T Consensus 39 g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~ 114 (418)
T 2c81_A 39 GEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATAT----AVLNVNALPVFVDVEAD 114 (418)
T ss_dssp SSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCTT
T ss_pred CCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHH----HHHHcCCEEEEEecCCC
Confidence 5554 8999999999999998999999999986 55666 7899999999999999974 445678888888764
Q ss_pred ----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc-ccC-ccCCCCcEEEecc--c
Q 022194 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-LSR-PLELGADIVMHSA--T 199 (301)
Q Consensus 128 ----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~-~~~-~~~~~~di~~~S~--s 199 (301)
|++++++++++++++|+++ ||+|...++++|.++|+++|+++|+|++|+.+. +.. ....-.|+++.|| |
T Consensus 115 ~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~ 191 (418)
T 2c81_A 115 TYCIDPQLIKSAITDKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQG 191 (418)
T ss_dssp TCSBCHHHHGGGCCTTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCCcCHHHHHHhhCCCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCC
Confidence 7899999998889988854 589999999999999999999999999999876 321 1111236888888 9
Q ss_pred ccccCCCCceeeEEEEcchhHHHHHHHhhhhc--------------C------C------CCCHHhHHHHHcccccHHHH
Q 022194 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE--------------G------S------GLAPFDCWICLRGVKTMALR 253 (301)
Q Consensus 200 K~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~--------------~------~------~~~~~~~~~~~~~l~~~~~~ 253 (301)
|+++ + | ++|+++.+++.+.+.+....... . . .+....++.....++.+.+.
T Consensus 192 K~~~-~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~ 268 (418)
T 2c81_A 192 KVLT-A-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDK 268 (418)
T ss_dssp SSSC-S-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHH
T ss_pred cccC-C-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHH
Confidence 9994 4 5 68999987666656554332210 0 0 02233333444455667777
Q ss_pred HHHHHHHHHHHHHHHHhCCCcc
Q 022194 254 VEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
.++..++++++.+.|++++++.
T Consensus 269 ~~~~~~~~~~l~~~L~~~~g~~ 290 (418)
T 2c81_A 269 NAIREKNAMFLNDALSKIDGIK 290 (418)
T ss_dssp HHHHHHHHHHHHHHHTTSTTEE
T ss_pred HHHHHHHHHHHHHHhccCCCcc
Confidence 7888888899999998876654
No 126
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.90 E-value=7e-23 Score=183.15 Aligned_cols=221 Identities=14% Similarity=0.111 Sum_probs=149.3
Q ss_pred ccccCC-CCch-HHHHHHHHHhhc----CCCceEE--ecchHHHHHHH---HhccCCC-----CeEEEcCCCCccHHHHH
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLD----KADRALC--FTSGMAALAAV---THLLGTG-----EEIVAGDDLYGGTDRLL 110 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~----~~~~~i~--~~sG~~ai~~~---~~~~~~g-----~~Vlv~~~~y~~~~~~~ 110 (301)
..|.+. |.+. ++++.+++...+ ..+++++ +++|++|+.++ .+++++| |+|+++.|.|+++.
T Consensus 68 ~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~--- 144 (412)
T 1ajs_A 68 HEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHN--- 144 (412)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHH---
T ss_pred cCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHH---
Confidence 345443 4333 445555543332 2356666 67778998644 3456899 99999999999987
Q ss_pred hhhcccCCcE-EEEecC---C----CHHHHHhhcCC---CceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeC
Q 022194 111 SRVTPKTGVV-VKRVNT---C----DLDEVASAIGP---WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 111 ~~~~~~~g~~-~~~~~~---~----d~~~l~~~l~~---~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~ 176 (301)
..++..|.+ ++.++. + |++++++++.+ +++++++++|+||||.+.+ +++|+++|+++|+++|+||
T Consensus 145 -~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 223 (412)
T 1ajs_A 145 -GVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDS 223 (412)
T ss_dssp -HHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred -HHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEc
Confidence 444556777 777765 3 78999888863 6778889999999999965 6789999999999999999
Q ss_pred CcCCccccC------cc-----CCCCcEEEecccccccCCCCceeeEEEE---cchh---HHHHHHHhhhhcCCCCCHHh
Q 022194 177 SIMSPVLSR------PL-----ELGADIVMHSATKFIAGHSDVMAGVLAV---KGER---LAKELYFLQNAEGSGLAPFD 239 (301)
Q Consensus 177 ~~~~~~~~~------~~-----~~~~di~~~S~sK~~~g~~g~~~g~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~ 239 (301)
+|....+.. +. ....++++.|+||.+ |++|+|.|++++ +++. +.+.+.........+.++..
T Consensus 224 ~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (412)
T 1ajs_A 224 AYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNF-GLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQG 302 (412)
T ss_dssp SCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHH
T ss_pred ccccccCCcccccchHHHHHhccCCcEEEEEeccccc-CCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHH
Confidence 987544321 11 123469999999999 667899999998 5432 33333332222222335555
Q ss_pred HHHHHcccc----------cHHHHHHHHHHHHHHHHHHHHhCC
Q 022194 240 CWICLRGVK----------TMALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 240 ~~~~~~~l~----------~~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
++++...++ .+.+.++++.++.+++.+.|+++.
T Consensus 303 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 303 ARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 555444443 334566777888888888888764
No 127
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.90 E-value=5.8e-23 Score=182.77 Aligned_cols=215 Identities=17% Similarity=0.092 Sum_probs=157.7
Q ss_pred chHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc----CCCC-eEEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL----GTGE-EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~----~~g~-~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
+..++++++++++++.+ +++++++|++|+. ++..++ ++|| +|+++++.|+++...+... ...|.+++.++.
T Consensus 63 ~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~ 141 (400)
T 3vax_A 63 RGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-AGRGFEVDFLTP 141 (400)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-HTTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-HhcCCeEEEEcc
Confidence 34789999999999986 4566666689986 455555 7899 9999999999987666433 567899999987
Q ss_pred C-----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEecccc
Q 022194 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATK 200 (301)
Q Consensus 127 ~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK 200 (301)
+ |++++++++++++++|++++++||||.+.|+++|+++|+++|+++|+|++|+.+.... .... .|+++.|+||
T Consensus 142 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K 220 (400)
T 3vax_A 142 GPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHK 220 (400)
T ss_dssp CTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGG
T ss_pred CCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHH
Confidence 5 8999999999999999999999999999999999999999999999999998766432 2233 8999999999
Q ss_pred cccCCCCceeeEEE-EcchhHH---HHHHHh-------hhhcCCCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHH
Q 022194 201 FIAGHSDVMAGVLA-VKGERLA---KELYFL-------QNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIA 265 (301)
Q Consensus 201 ~~~g~~g~~~g~~~-~~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~ 265 (301)
++ |+.| .|+++ ++++.+. ..+... ......+.+.....++..+++ .+.+.+++..++++++.
T Consensus 221 ~~-g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 297 (400)
T 3vax_A 221 IG-APKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLL 297 (400)
T ss_dssp GT-SCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred hC-CCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 65 6666 46776 6652111 000010 011223344444444433333 34566777888888888
Q ss_pred HHHHhCCCcc
Q 022194 266 EFLASHPRVK 275 (301)
Q Consensus 266 ~~l~~~~~v~ 275 (301)
+.|+ .+++.
T Consensus 298 ~~L~-~~~~~ 306 (400)
T 3vax_A 298 AGLA-STSFQ 306 (400)
T ss_dssp HHHT-TTTCE
T ss_pred HhhC-CCCEE
Confidence 8887 66653
No 128
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.90 E-value=3.1e-23 Score=184.64 Aligned_cols=209 Identities=15% Similarity=0.179 Sum_probs=152.8
Q ss_pred HHHHHHHHHhhcCCC-ceEEe-cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CH
Q 022194 57 RDALESLLAKLDKAD-RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DL 129 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~-~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~ 129 (301)
..++++.+++++|.+ +.+++ ++|++++. ++..++++||+|+++.|.|+++. ..++..|.+++.++.+ |+
T Consensus 76 ~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~d~ 151 (397)
T 2zyj_A 76 YAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAI----QAFRLQGPRFLTVPAGEEGPDL 151 (397)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTCCEEEEEEEETTEECH
T ss_pred CHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCEEEecCcCCCCCCH
Confidence 567777788777764 44544 55568886 56667889999999999999987 4445678888887753 78
Q ss_pred HHHHhhcCC-CceEE-EEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----ccCC------CCcE
Q 022194 130 DEVASAIGP-WTKLV-WVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PLEL------GADI 193 (301)
Q Consensus 130 ~~l~~~l~~-~~~~v-~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~~~------~~di 193 (301)
+++++++++ ++++| ++++|+||||.+.+ +++|+++|+++|+++|+||+|+.+.+.. .... +.++
T Consensus 152 ~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i 231 (397)
T 2zyj_A 152 DALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVI 231 (397)
T ss_dssp HHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEE
T ss_pred HHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEE
Confidence 999998875 78887 46899999999986 5589999999999999999998754421 1111 4559
Q ss_pred EEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHHHHHHH
Q 022194 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 194 ~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l 268 (301)
++.|+||+++ +|++.|+++++ +.+.+.+.........+.++..+.++...++ .+.+..+++.++++.+.+.|
T Consensus 232 ~~~s~sK~~~--~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 308 (397)
T 2zyj_A 232 YLGSFSKVLS--PGLRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHAL 308 (397)
T ss_dssp EEEESTTTTC--GGGCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccc--ccceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999995 67889999987 4566655554444333446665555544443 24555667778888888888
Q ss_pred Hh-CC
Q 022194 269 AS-HP 272 (301)
Q Consensus 269 ~~-~~ 272 (301)
++ .+
T Consensus 309 ~~~~~ 313 (397)
T 2zyj_A 309 DREVP 313 (397)
T ss_dssp HHHSC
T ss_pred HHHCC
Confidence 76 45
No 129
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.90 E-value=2.4e-23 Score=183.76 Aligned_cols=214 Identities=16% Similarity=0.166 Sum_probs=154.5
Q ss_pred CchHHHHHHHHHhhcCC-CceEEecchHHHHHHHHh----cc---CCC-CeEEEcCCCCccHHHHHhhhccc----CCc-
Q 022194 54 NPTRDALESLLAKLDKA-DRALCFTSGMAALAAVTH----LL---GTG-EEIVAGDDLYGGTDRLLSRVTPK----TGV- 119 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~-~~~i~~~sG~~ai~~~~~----~~---~~g-~~Vlv~~~~y~~~~~~~~~~~~~----~g~- 119 (301)
.+...++++.+++++|. +++++++||++++.+++. +. ++| |+|++++|.|+++...+...... .+.
T Consensus 69 ~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~ 148 (375)
T 2eh6_A 69 NPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFE 148 (375)
T ss_dssp CHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTC
T ss_pred CHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCC
Confidence 34578899999999998 677777888899864432 34 778 99999999999875433222111 122
Q ss_pred ----EEEEecCCCHHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CccccC---cc
Q 022194 120 ----VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PL 187 (301)
Q Consensus 120 ----~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~~---~~ 187 (301)
.+..++..|++++++++++++++|++++++||||.+.+ +++|+++|+++|+++|+||+|+ .+.... ..
T Consensus 149 ~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 228 (375)
T 2eh6_A 149 PLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQ 228 (375)
T ss_dssp SCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGG
T ss_pred CCCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhh
Confidence 26666667999999999989999999999999999977 9999999999999999999998 332221 12
Q ss_pred CCC--CcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHH
Q 022194 188 ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIA 265 (301)
Q Consensus 188 ~~~--~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 265 (301)
..+ .|++ |+||++++ |++.|++++++ .+.+.+.........+.++..+.++...++.+.+..+++.++++++.
T Consensus 229 ~~~~~~d~~--s~SK~~~~--g~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 303 (375)
T 2eh6_A 229 HFNLKPDVI--ALAKGLGG--GVPIGAILARE-EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFK 303 (375)
T ss_dssp GGTCCCSEE--EECGGGGT--TSCCEEEEEEH-HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCEE--EEcccccC--CCCeEEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234 5665 67799963 57789999875 44443322112233445666666666666655566677888888899
Q ss_pred HHHHhCC
Q 022194 266 EFLASHP 272 (301)
Q Consensus 266 ~~l~~~~ 272 (301)
+.|++++
T Consensus 304 ~~L~~~~ 310 (375)
T 2eh6_A 304 EKLKELG 310 (375)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9998764
No 130
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.90 E-value=6.3e-23 Score=182.36 Aligned_cols=254 Identities=14% Similarity=0.062 Sum_probs=161.9
Q ss_pred ceeeecCCCCCCCCcc----ccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhc----CCCceEE--ecc
Q 022194 11 TLLMNFSNEFDPYGAL----STPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLD----KADRALC--FTS 78 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~----~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~----~~~~~i~--~~s 78 (301)
..+++|+ .++|+... .+|.+......... ......|.+. |.+. ++++.+++.+.. ..+++++ +++
T Consensus 26 ~~~i~l~-~g~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g 102 (396)
T 2q7w_A 26 PGKINLG-IGVYKDETGKTPVLTSVKKAEQYLLE--NETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPG 102 (396)
T ss_dssp --CEESS-CCSCCCTTSCCCCCHHHHHHHHHHHH--HCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred CCceecc-cccccCCCCCccCcHHHHHHHHhhcC--cccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEeccc
Confidence 3578998 56653322 22333332111100 0022345433 4433 555555553332 2345555 666
Q ss_pred hHHHHHHHHh---ccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC---C----CHHHHHhhcCC---CceEEEE
Q 022194 79 GMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C----DLDEVASAIGP---WTKLVWV 145 (301)
Q Consensus 79 G~~ai~~~~~---~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~---~~~~v~i 145 (301)
|++++.++.. .+.+||+|++++|.|+++. ..++..|.+++.++. + |++++++.+++ +++++++
T Consensus 103 ~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~ 178 (396)
T 2q7w_A 103 GTGALRVAADFLAKNTSVKRVWVSNPSWPNHK----SVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFH 178 (396)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEEESCCTHHH----HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEE
T ss_pred chhhHHHHHHHHHHhCCCCEEEEcCCCchhHH----HHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEe
Confidence 7899864433 2469999999999999987 445567888888886 3 79999999874 4678888
Q ss_pred eCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC-----cc-----CCCCcEEEecccccccCCCCceeeE
Q 022194 146 ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PL-----ELGADIVMHSATKFIAGHSDVMAGV 212 (301)
Q Consensus 146 ~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~~-----~~~~di~~~S~sK~~~g~~g~~~g~ 212 (301)
++|+||||.+.+ +++|+++|+++|+++|+||+|....+.. +. ....++++.|+||++ |++|+|.|+
T Consensus 179 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~ 257 (396)
T 2q7w_A 179 GCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF-GLYNERVGA 257 (396)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTT-TCGGGCCEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccc-cccccccce
Confidence 999999999975 6789999999999999999998654320 11 123579999999999 667889999
Q ss_pred EEE--cch----hHHHHHHHhhhhcCCCCCHHhHHHHHccccc----------HHHHHHHHHHHHHHHHHHHHhCC
Q 022194 213 LAV--KGE----RLAKELYFLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 213 ~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
+++ +++ .+.+.+.........+.++..+.++...++. +.+..+++.++++.+.+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 987 333 3433333322222233466655555554432 33445667778888888888764
No 131
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.90 E-value=4.3e-22 Score=175.57 Aligned_cols=212 Identities=16% Similarity=0.173 Sum_probs=161.2
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc---cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.+...++++.++++++.+++++++||++|+. ++..+ +++||+|+++++.|+++... +...|.+++.++.+
T Consensus 31 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~ 106 (375)
T 2fnu_A 31 GKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANM----LLESGYTPVFAGIKND 106 (375)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHH----HHHTTCEEEECCBCTT
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHH----HHHCCCEEEEeccCCC
Confidence 3558899999999999988888888899986 56666 78999999999999999744 34578899888864
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEeccc--c
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--K 200 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~S~s--K 200 (301)
|++++++++++++++|+++++ +|.+.|+++|.++|+++|+++|+|++|+.+........+ .|+++.|+| |
T Consensus 107 ~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K 183 (375)
T 2fnu_A 107 GNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIK 183 (375)
T ss_dssp SSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTS
T ss_pred CCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCC
Confidence 789999999888998888776 899999999999999999999999999877643221111 378888888 9
Q ss_pred cccCCCCceeeEEEEcchhHHHHHHHhhhhc--------------C--CCCCHHhHHHHHcccccHHHHHHHHHHHHHHH
Q 022194 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAE--------------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 264 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 264 (301)
++ ++ |+ +++++.+++.+.+.+....... + ..+++..++.....++.+.+..++..++++++
T Consensus 184 ~~-~~-g~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 260 (375)
T 2fnu_A 184 PI-TT-AE-GGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTY 260 (375)
T ss_dssp SS-CC-SS-CEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred Cc-cc-cC-ceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 55 53 4444435455666554433211 1 24555555555555667778888899999999
Q ss_pred HHHHHhCCCcc
Q 022194 265 AEFLASHPRVK 275 (301)
Q Consensus 265 ~~~l~~~~~v~ 275 (301)
.+.|++++++.
T Consensus 261 ~~~L~~~~~~~ 271 (375)
T 2fnu_A 261 DRIFKDNPYFT 271 (375)
T ss_dssp HHHHTTCSSEE
T ss_pred HHHhhcCCCcc
Confidence 99999887653
No 132
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.90 E-value=3.4e-23 Score=190.49 Aligned_cols=214 Identities=18% Similarity=0.190 Sum_probs=158.8
Q ss_pred HHHHHHHHHhhcCCC----ce--EEecchHHHHH-HHHhccCCC--------CeEEEcCCCCccHHHHHhhhcccCCcEE
Q 022194 57 RDALESLLAKLDKAD----RA--LCFTSGMAALA-AVTHLLGTG--------EEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~----~~--i~~~sG~~ai~-~~~~~~~~g--------~~Vlv~~~~y~~~~~~~~~~~~~~g~~~ 121 (301)
.+++++++++++|.+ ++ +++++|++++. ++..+.+++ |+|+++.+.|+++. ..++..|.++
T Consensus 141 e~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~----~~~~~~G~~v 216 (514)
T 3mad_A 141 EAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD----KAAQYFGIKL 216 (514)
T ss_dssp HHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH----HHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH----HHHHHcCCee
Confidence 566778889999876 44 77788889985 555566555 89999999999986 5555678899
Q ss_pred EEecCC-----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc------------c
Q 022194 122 KRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL------------S 184 (301)
Q Consensus 122 ~~~~~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~------------~ 184 (301)
+.++.+ |++++++++++++++|++++++||+|.+.|+++|+++|++||+++|+|++|+.+.. .
T Consensus 217 ~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~ 296 (514)
T 3mad_A 217 VRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPF 296 (514)
T ss_dssp EEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCC
T ss_pred EEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcc
Confidence 999876 89999999999999999999999999999999999999999999999999986533 1
Q ss_pred CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh----------cCCCCC---HHhHHHHHccc--cc
Q 022194 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA----------EGSGLA---PFDCWICLRGV--KT 249 (301)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~---~~~~~~~~~~l--~~ 249 (301)
.....++|+++.|+||++.++.+ .|+++.+++.+.......... ...+.. ...+++++..+ ..
T Consensus 297 ~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~ 374 (514)
T 3mad_A 297 DFRLEGVTSVSADTHKYGYGAKG--TSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEG 374 (514)
T ss_dssp STTSTTCCEEEECTTTTTCCCSS--CEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEECchhccCCCCC--eEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHH
Confidence 22345789999999999766544 688888876554321100000 001112 22334444333 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcce
Q 022194 250 MALRVEKQQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~~~v~~ 276 (301)
+.+..++..++++++.+.|++++++..
T Consensus 375 ~~~~~~~~~~~~~~l~~~L~~~~g~~~ 401 (514)
T 3mad_A 375 YLDATRRILQAADRLKAGVRAIPSLKI 401 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 566778888999999999998776543
No 133
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.90 E-value=2e-22 Score=179.00 Aligned_cols=208 Identities=19% Similarity=0.244 Sum_probs=161.5
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
+...++++.++++++.+++++++||++|+. ++..+ +++||+|++++|.|+++. ..++..|.+++.++.+
T Consensus 39 ~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~ 114 (393)
T 1mdo_A 39 PKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTL----NMIVLLGANPVMVDVDRDTLM 114 (393)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHH----HHHHHTTCEEEEECBCTTTCC
T ss_pred hHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHH----HHHHHCCCEEEEEeccCCcCC
Confidence 558899999999999988889999999996 55666 789999999999999986 4445678888888753
Q ss_pred -CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC-CcEEEeccc--cccc
Q 022194 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSAT--KFIA 203 (301)
Q Consensus 128 -d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~-~di~~~S~s--K~~~ 203 (301)
|++++++++++++++|+++ ||+|...++++|.++|+++|+++|+|++|+.+........+ .|+++.|+| |+++
T Consensus 115 ~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~ 191 (393)
T 1mdo_A 115 VTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNIT 191 (393)
T ss_dssp BCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSC
T ss_pred CCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccc
Confidence 7899999998888988865 47999999999999999999999999999976533222345 899999999 8885
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhhhhc----------------------C--CCCCHHhHHHHHcccccHHHHHHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQNAE----------------------G--SGLAPFDCWICLRGVKTMALRVEKQQD 259 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~ 259 (301)
+ + ++|+++.+++.+.+.+....... + ..+++..++.....++.+.+..++..+
T Consensus 192 ~--~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~ 268 (393)
T 1mdo_A 192 C--A-EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAA 268 (393)
T ss_dssp S--S-SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred c--c-cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 3 58999887666666554432210 0 123555555555556667777777788
Q ss_pred HHHHHHHHHHhCC
Q 022194 260 NAQKIAEFLASHP 272 (301)
Q Consensus 260 ~~~~l~~~l~~~~ 272 (301)
+++++.+.|++++
T Consensus 269 ~~~~l~~~L~~~~ 281 (393)
T 1mdo_A 269 IAAQYHQAMADLP 281 (393)
T ss_dssp HHHHHHHHHHTSS
T ss_pred HHHHHHHHHhcCC
Confidence 8889999998875
No 134
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.83 E-value=1.7e-25 Score=198.87 Aligned_cols=254 Identities=16% Similarity=0.170 Sum_probs=169.1
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC----CCceEEecchHHHHH-H
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK----ADRALCFTSGMAALA-A 85 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~----~~~~i~~~sG~~ai~-~ 85 (301)
..+++|+ .+++ +...+|.+....... .....+.|...-.+.++++.+++.+.+| .++++++++|++++. +
T Consensus 31 ~~~i~l~-~~~~-~~~~~~~v~~a~~~~---~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 105 (392)
T 3b1d_A 31 PQLLPAW-IADM-DFEVMPEVKQAIHDY---AEQLVYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIA 105 (392)
Confidence 3678887 4444 333456555443221 1112334443311226666666666655 234555555578886 5
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--------CCHHHHHhhcC-CCceEEEEeCCCCCccccc
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--------~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~ 156 (301)
+..++++||+|+++.|.|+++. ..+...|.+++.++. .|+++++++++ .++++|++++|+||||.+.
T Consensus 106 ~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 181 (392)
T 3b1d_A 106 IQAFTKEGEAVLINSPVYPPFA----RSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVW 181 (392)
Confidence 6667889999999999999986 455667777777765 26788888887 6789999999999999997
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCcCCccccC-----c---cC--CCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----P---LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~~~~~~~~-----~---~~--~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
+ +++|+++|+++|+++|+||+|+...+.. . .. .+.++++.|+||++ |.+|++.|+++++++.+.+.
T Consensus 182 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~ 260 (392)
T 3b1d_A 182 EREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTF-NIAGTKNSYAIIENPTLCAQ 260 (392)
Confidence 5 8999999999999999999998644321 1 11 45679999999999 55678999999876656665
Q ss_pred HHHhhhhcC-CCCCHHhHHHHHcccc----cHHHHHHHHHHHHHHHHHHHHh-CCCc
Q 022194 224 LYFLQNAEG-SGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS-HPRV 274 (301)
Q Consensus 224 ~~~~~~~~~-~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~-~~~v 274 (301)
+.......+ .+.++..+.++...++ .+.+.++++.++++.+.+.|++ ++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 317 (392)
T 3b1d_A 261 FKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRL 317 (392)
Confidence 554443332 1234444443333332 3455566677777788888876 5554
No 135
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.90 E-value=7.6e-23 Score=178.69 Aligned_cols=209 Identities=15% Similarity=0.120 Sum_probs=152.5
Q ss_pred HHHHHHHHHhhcCCC---ceEEe-cchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 57 RDALESLLAKLDKAD---RALCF-TSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~-~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
..++++++++++|.+ +.+++ ++|++++..+...+.. |+|+++++.|+++ .+...++..|.+++.++.+
T Consensus 35 ~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~-d~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~ 111 (353)
T 2yrr_A 35 NRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR-GPVLVLVNGAFSQ--RVAEMAALHGLDPEVLDFPPGEPV 111 (353)
T ss_dssp HHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC-CCEEEEECSHHHH--HHHHHHHHTTCCEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC-CcEEEEcCCCchH--HHHHHHHHcCCceEEEeCCCCCCC
Confidence 789999999999874 44544 5667998755444333 8999999999886 2335556678888888863
Q ss_pred CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEecccccccCC
Q 022194 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIAGH 205 (301)
Q Consensus 128 d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK~~~g~ 205 (301)
|++++++.+++ ++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.... ....+.|+++.|++|+++++
T Consensus 112 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~ 191 (353)
T 2yrr_A 112 DPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAP 191 (353)
T ss_dssp CHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCC
T ss_pred CHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCC
Confidence 78999999887 89999999999999999999999999999999999999998665432 22346799999999988777
Q ss_pred CCceeeEEEEcchhHHHHHH-------------H-h-hhhcCCCCCHHhHHHHHccccc-----HHHHHHHHHHHHHHHH
Q 022194 206 SDVMAGVLAVKGERLAKELY-------------F-L-QNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIA 265 (301)
Q Consensus 206 ~g~~~g~~~~~~~~~~~~~~-------------~-~-~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~ 265 (301)
+| .|+++++++.+ +.+. . . ......+.+.....++..+++. +.+.+++..++++++.
T Consensus 192 ~g--~G~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 268 (353)
T 2yrr_A 192 PG--LAPIAASLEAR-KAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVL 268 (353)
T ss_dssp SS--CEEEEECHHHH-HHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred Cc--eEEEEECHHHH-HHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 77 48888876533 3322 0 0 1112234454444443333333 4456678888888899
Q ss_pred HHHHhC
Q 022194 266 EFLASH 271 (301)
Q Consensus 266 ~~l~~~ 271 (301)
+.|++.
T Consensus 269 ~~L~~~ 274 (353)
T 2yrr_A 269 EELKAR 274 (353)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 999875
No 136
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.90 E-value=5.6e-22 Score=178.06 Aligned_cols=211 Identities=20% Similarity=0.223 Sum_probs=159.0
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------C
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------D 128 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d 128 (301)
+...++++.++++++.+++++++||++++.+++..+.+||+|++++|.|+++.. .+...|.+++.++.+ |
T Consensus 52 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~~gd~Vlv~~~~~~~~~~----~~~~~G~~~~~v~~~~~~~~~d 127 (424)
T 2po3_A 52 PLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAGLTGEVIMPSMTFAATPH----ALRWIGLTPVFADIDPDTGNLD 127 (424)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHTCCSEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTSSBC
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCEEEECCCccHHHHH----HHHHcCCEEEEEecCCCcCCcC
Confidence 558899999999999988888888899997555555688999999999999873 445678888888754 7
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC--ccCCCCcEEEeccc--ccccC
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR--PLELGADIVMHSAT--KFIAG 204 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~--~~~~~~di~~~S~s--K~~~g 204 (301)
++++++++++++++|++++ |+|...++++|+++|+++|+++|+|++|+.+.... ......|+++.|+| |++++
T Consensus 128 ~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~ 204 (424)
T 2po3_A 128 PDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNA 204 (424)
T ss_dssp HHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC
T ss_pred HHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccC
Confidence 8999999988899998864 89999999999999999999999999998644321 12222589999999 77743
Q ss_pred CCCceeeEEEEcchhHHHHHHHhhhhc------------CCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCC
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQNAE------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
.++|+++.+++.+.+.+....... ...+++..++..+..++.+.+..++..++.+++.+.|++++
T Consensus 205 ---~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 281 (424)
T 2po3_A 205 ---FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLADLP 281 (424)
T ss_dssp ---SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCT
T ss_pred ---CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 368999988556666554433211 11234555555555555566666777778888888888776
Q ss_pred Ccc
Q 022194 273 RVK 275 (301)
Q Consensus 273 ~v~ 275 (301)
++.
T Consensus 282 g~~ 284 (424)
T 2po3_A 282 GVL 284 (424)
T ss_dssp TEE
T ss_pred Ccc
Confidence 653
No 137
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.90 E-value=1.2e-22 Score=179.25 Aligned_cols=212 Identities=12% Similarity=0.047 Sum_probs=153.1
Q ss_pred chHHHHHHHHHhhcCCC---ceEEe-cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 55 PTRDALESLLAKLDKAD---RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~---~~i~~-~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
+.+++++++++++++.+ +.+++ +||++++. ++..++++||+|++++|.|++.. +...+...|.++..++.+
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 129 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR--FVQLCEIHEIPYVALKLEHG 129 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 34788999999999876 45553 55589985 66678899999999998777643 224456667788777653
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEeccccccc
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK~~~ 203 (301)
|++++++++++++++|++++|+||||.+.|+++|+++|+++|+++|+|++++.+.... ....++|+++.|+||+++
T Consensus 130 ~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~ 209 (376)
T 3f0h_A 130 KKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLA 209 (376)
T ss_dssp CCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTC
T ss_pred CCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCccccc
Confidence 7899999888899999999999999999999999999999999999999998776542 334578999999999997
Q ss_pred CCCCceeeEEEEcchhHHHHHHHhhh-----------------hcCCCCCHHhHHHHHccccc------HHHHHHHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAKELYFLQN-----------------AEGSGLAPFDCWICLRGVKT------MALRVEKQQDN 260 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~ 260 (301)
+++|+ |+++.+++ +.+.+..... ....+.+....+++..+++. +.+..++..++
T Consensus 210 ~~~G~--g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 286 (376)
T 3f0h_A 210 CPPGI--SVIVLAPR-GVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQ 286 (376)
T ss_dssp CCSSC--EEEEECHH-HHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCce--EEEEECHH-HHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 67774 77777654 4444332110 01223333222333333332 34556667777
Q ss_pred HHHHHHHHHhC
Q 022194 261 AQKIAEFLASH 271 (301)
Q Consensus 261 ~~~l~~~l~~~ 271 (301)
++++.+.|+++
T Consensus 287 ~~~l~~~L~~~ 297 (376)
T 3f0h_A 287 AADFRAKIKDL 297 (376)
T ss_dssp HHHHHHHTTTS
T ss_pred HHHHHHHHHHc
Confidence 77788877765
No 138
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.90 E-value=8.8e-22 Score=175.35 Aligned_cols=219 Identities=16% Similarity=0.113 Sum_probs=151.8
Q ss_pred CCccccCC-CCch-HHHHHHHHHhhcCC----Cc--eEEecchHHHHH-HHHhccC--CCCeEEEcCCCCccHHHHHhhh
Q 022194 45 GPYDYTRS-GNPT-RDALESLLAKLDKA----DR--ALCFTSGMAALA-AVTHLLG--TGEEIVAGDDLYGGTDRLLSRV 113 (301)
Q Consensus 45 ~~~~y~~~-g~~~-~~~l~~~l~~~~~~----~~--~i~~~sG~~ai~-~~~~~~~--~g~~Vlv~~~~y~~~~~~~~~~ 113 (301)
....|.+. |.+. ++++.+++.+..+. ++ .+++++|++|+. ++..+++ | |+|++++|.|..+. ..
T Consensus 64 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~----~~ 138 (405)
T 3k7y_A 64 KEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHV----NM 138 (405)
T ss_dssp CCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHH----HH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHH----HH
Confidence 34567776 8776 88888888665542 22 245555578886 4445555 8 99999999999997 56
Q ss_pred cccCCcEEEEecCC-------CHHHHHhhcC--CCceEEEEeCC-CCCcccccc---HHHHHHHHHHcCCEEEEeCCcCC
Q 022194 114 TPKTGVVVKRVNTC-------DLDEVASAIG--PWTKLVWVESP-TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (301)
Q Consensus 114 ~~~~g~~~~~~~~~-------d~~~l~~~l~--~~~~~v~i~~~-~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~ 180 (301)
++..|.+++.++.. |++.+++.+. ++++++++++| |||||.+.+ +++|+++|++||+++|+||+|..
T Consensus 139 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~ 218 (405)
T 3k7y_A 139 IESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQG 218 (405)
T ss_dssp HHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTT
T ss_pred HHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCccc
Confidence 67889999988751 7899998886 35678888765 899999975 77799999999999999999975
Q ss_pred ccccC------c-----cCCCCcEEEecccccccCCCCceeeEEEE--cchhHHHHHH----HhhhhcCCCCCHHhHHHH
Q 022194 181 PVLSR------P-----LELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELY----FLQNAEGSGLAPFDCWIC 243 (301)
Q Consensus 181 ~~~~~------~-----~~~~~di~~~S~sK~~~g~~g~~~g~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 243 (301)
..+.. . ......+++.||||+| +.+|+|.|++++ .++.+.+.+. ..........+...+.++
T Consensus 219 l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~ 297 (405)
T 3k7y_A 219 FGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM-SLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRIL 297 (405)
T ss_dssp TSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTS-CCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred ccCCCcccchHHHHHHHhcCCcEEEEeeCCccC-CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHH
Confidence 44321 0 1124679999999999 667899999864 4455444332 222222223333433333
Q ss_pred Hccc----------ccHHHHHHHHHHHHHHHHHHHH
Q 022194 244 LRGV----------KTMALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 244 ~~~l----------~~~~~~~~~~~~~~~~l~~~l~ 269 (301)
...+ +.+.+.++++.++++.+.+.|+
T Consensus 298 ~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 298 CQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 2234455668888888999998
No 139
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.90 E-value=3.3e-22 Score=184.44 Aligned_cols=163 Identities=18% Similarity=0.224 Sum_probs=126.2
Q ss_pred CCch-HHHHHHHHHhhcCC-------CceEEecchHHHHHH-HHh-----ccCCCCeEEEcCCCCccHHHHHhhhcccCC
Q 022194 53 GNPT-RDALESLLAKLDKA-------DRALCFTSGMAALAA-VTH-----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 53 g~~~-~~~l~~~l~~~~~~-------~~~i~~~sG~~ai~~-~~~-----~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g 118 (301)
|.+. ++++.+.+.+.++. ++++++++|++++.. +.. ++++||+|++++|.|+++. ..+...|
T Consensus 139 g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~----~~~~~~g 214 (533)
T 3f6t_A 139 CLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYL----RIPELKD 214 (533)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH----TSGGGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH----HHHHHcC
Confidence 5555 77777777666232 244555555788864 444 7899999999999999886 6666778
Q ss_pred cEEEEecCC---------CHHHHHhhcCCCceEEEEeCCCCCccccccH---HHHHHHHH-HcCCEEEEeCCcCCccccC
Q 022194 119 VVVKRVNTC---------DLDEVASAIGPWTKLVWVESPTNPRQQICDI---RKIAEMAH-AHGALLLVDNSIMSPVLSR 185 (301)
Q Consensus 119 ~~~~~~~~~---------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l---~~l~~l~~-~~~~~li~D~~~~~~~~~~ 185 (301)
..++.++.+ |++++++++++++++|++++|+||||.+.+. ++|+++|+ +||+++|+||+|+......
T Consensus 215 ~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~ 294 (533)
T 3f6t_A 215 YELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF 294 (533)
T ss_dssp SEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC
T ss_pred CeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc
Confidence 888877753 7899999999999999999999999999875 47888888 6899999999998544321
Q ss_pred c----cCCCCcEEEecccccccCCCCceeeEEEEcchhH
Q 022194 186 P----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (301)
Q Consensus 186 ~----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~ 220 (301)
. ...+.++++.||||.+ |++|+|.|+++++++.+
T Consensus 295 ~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~~~~~~ 332 (533)
T 3f6t_A 295 KSIYSVVPYNTMLVYSYSKLF-GCTGWRLGVIALNEKNV 332 (533)
T ss_dssp CCHHHHSGGGEEEEEESHHHH-TCGGGCEEEEEEESSCH
T ss_pred cCHhhcCCCCEEEEecCcccC-CCcccceEEEEECcHHH
Confidence 1 1224679999999999 66789999999987633
No 140
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.89 E-value=9.9e-23 Score=177.94 Aligned_cols=212 Identities=22% Similarity=0.231 Sum_probs=144.1
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
.+...++++++++++|.++.+++++|++++. ++..++++||+|++++|.|....... ..+...|.+++.+ .+
T Consensus 37 ~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v-~~~~~~~ 114 (347)
T 1jg8_A 37 DPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVG-AMAVLSGVMPHPV-PGKNGAM 114 (347)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTT-HHHHHTCCEEEEE-CEETTEE
T ss_pred ChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhcccc-chhhccCeEEEEe-cCCCCcc
Confidence 4558899999999999998999999998875 66667899999999999986543100 1344567788777 32
Q ss_pred CHHHHHhhcCC------CceEEEEeCCCCCc-ccccc---HHHHHHHHHHcCCEEEEeCCcCCcc---cc-C--ccCCCC
Q 022194 128 DLDEVASAIGP------WTKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMSPV---LS-R--PLELGA 191 (301)
Q Consensus 128 d~~~l~~~l~~------~~~~v~i~~~~np~-G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~---~~-~--~~~~~~ 191 (301)
|++++++++++ ++++|++++|+||| |.+.+ +++|+++|+++|+++|+|++|..+. .. . ....+.
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 194 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYA 194 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccc
Confidence 89999999875 68999999999999 99865 6789999999999999999874321 11 1 112357
Q ss_pred cEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCC--CHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHH
Q 022194 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 192 di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~ 269 (301)
|.++.|+||+++++ .+++++.+ +.+.+.+.......+.+. +...+.....+++...+..++..++++++.+.|+
T Consensus 195 d~~~~s~sK~l~~~---~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~ 270 (347)
T 1jg8_A 195 DSVMFCLSKGLCAP---VGSVVVGD-RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLK 270 (347)
T ss_dssp SEEEEESSSTTCCS---SCEEEEEC-HHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHH
T ss_pred cEEEEecccccCCC---ceEEEEcC-HHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999654 24455554 455555544433333322 3333333333332211222334456677777776
Q ss_pred hC
Q 022194 270 SH 271 (301)
Q Consensus 270 ~~ 271 (301)
++
T Consensus 271 ~~ 272 (347)
T 1jg8_A 271 EI 272 (347)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 141
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.89 E-value=5.9e-22 Score=175.24 Aligned_cols=212 Identities=10% Similarity=0.063 Sum_probs=150.8
Q ss_pred HHHHHHHHHhhcCC------CceEEecchHHHHH-HHHhcc---CCCCeEEEcC-CCCccHHHHHhhhcccCCcEEEEec
Q 022194 57 RDALESLLAKLDKA------DRALCFTSGMAALA-AVTHLL---GTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVN 125 (301)
Q Consensus 57 ~~~l~~~l~~~~~~------~~~i~~~sG~~ai~-~~~~~~---~~g~~Vlv~~-~~y~~~~~~~~~~~~~~g~~~~~~~ 125 (301)
..++++++++.++. +++++++||++++. ++..+. ++||+|++.+ +.|+... ...++..|.+++.++
T Consensus 40 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v~ 116 (385)
T 2bkw_A 40 FQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVVR 116 (385)
T ss_dssp HHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEEe
Confidence 56677788877765 24556667789986 555565 8999998874 4555442 134556788998888
Q ss_pred C-C-----CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHc--CCEEEEeCCcCCcccc-CccCCCCcEEE
Q 022194 126 T-C-----DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVM 195 (301)
Q Consensus 126 ~-~-----d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~--~~~li~D~~~~~~~~~-~~~~~~~di~~ 195 (301)
. + |++++++++++ ++++|++++++||||.+.|+++|+++|+++ |+++|+|++|+.+... .....++|+++
T Consensus 117 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~ 196 (385)
T 2bkw_A 117 PLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFAL 196 (385)
T ss_dssp CSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEE
T ss_pred cCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEE
Confidence 7 3 78999999876 799999999999999999999999999999 9999999999876543 23345789999
Q ss_pred ecccccccCCCCceeeEEEEcchhHHHHH------------------HHh--hhhc-----CCCCCHHhHHHHHccccc-
Q 022194 196 HSATKFIAGHSDVMAGVLAVKGERLAKEL------------------YFL--QNAE-----GSGLAPFDCWICLRGVKT- 249 (301)
Q Consensus 196 ~S~sK~~~g~~g~~~g~~~~~~~~~~~~~------------------~~~--~~~~-----~~~~~~~~~~~~~~~l~~- 249 (301)
+|+||+++|++|+ |+++++++.+.+.+ ... .... ..+.+.....++..+++.
T Consensus 197 ~s~~K~~~~~~G~--G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 274 (385)
T 2bkw_A 197 TASQKAIGAPAGL--SISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEI 274 (385)
T ss_dssp EESSSTTCCCSCE--EEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH
T ss_pred ecCccccccCCcc--eEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 9999988777774 88888765443122 110 0111 123444444444344333
Q ss_pred ----HHHHHHHHHHHHHHHHHHH-HhCCCc
Q 022194 250 ----MALRVEKQQDNAQKIAEFL-ASHPRV 274 (301)
Q Consensus 250 ----~~~~~~~~~~~~~~l~~~l-~~~~~v 274 (301)
+.+.+++..++++++.+.| +++ ++
T Consensus 275 ~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~ 303 (385)
T 2bkw_A 275 LEEGLHKRWDLHREMSDWFKDSLVNGL-QL 303 (385)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHTTT-CC
T ss_pred HHccHHHHHHHHHHHHHHHHHHHHHhc-Cc
Confidence 3455677888888999999 765 44
No 142
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.89 E-value=1.4e-23 Score=186.88 Aligned_cols=247 Identities=15% Similarity=0.125 Sum_probs=164.6
Q ss_pred ceeeecCCCC---CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF---DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~---~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~ 87 (301)
..++||+ ++ +++|. ++|.+........+. .......+..+.++++++.+++++|.+++++++||++|+.+++
T Consensus 40 ~~~ld~~-~~~~~~~lg~-~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al 114 (397)
T 2ord_A 40 NAYLDFT-SGIAVNVLGH-SHPRLVEAIKDQAEK---LIHCSNLFWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAI 114 (397)
T ss_dssp CEEEESS-HHHHTCTTCB-TCHHHHHHHHHHHHH---CSCCCTTSEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHH
T ss_pred CEEEECC-ccccccccCC-CCHHHHHHHHHHHHh---cccCccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHH
Confidence 4688998 44 88998 455454432221110 0010001123558999999999999888888899999986444
Q ss_pred h-ccC------C-CCeEEEcCCCCccHHHHHhhhcccCCcE------------EEEecCCCHHHHHhhcCCCceEEEEeC
Q 022194 88 H-LLG------T-GEEIVAGDDLYGGTDRLLSRVTPKTGVV------------VKRVNTCDLDEVASAIGPWTKLVWVES 147 (301)
Q Consensus 88 ~-~~~------~-g~~Vlv~~~~y~~~~~~~~~~~~~~g~~------------~~~~~~~d~~~l~~~l~~~~~~v~i~~ 147 (301)
. +.. + +++|++.+|.|++.... .+...|.+ +..++..|++++++++++++++|++++
T Consensus 115 ~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~---~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 191 (397)
T 2ord_A 115 KIARKYGKKKSEKKYRILSAHNSFHGRTLG---SLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEP 191 (397)
T ss_dssp HHHHHHHHHHCTTCCEEEEEBTCCCCSSHH---HHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECS
T ss_pred HHHHHHhhcCCCCCceEEEEcCCcCCCchh---hhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEec
Confidence 4 332 4 57899999999875431 11222222 677777899999999998999999999
Q ss_pred CCCCccc-c---ccHHHHHHHHHHcCCEEEEeCCcCCccc-cCcc---CCC--CcEEEecccccccCCCCceeeEEEEcc
Q 022194 148 PTNPRQQ-I---CDIRKIAEMAHAHGALLLVDNSIMSPVL-SRPL---ELG--ADIVMHSATKFIAGHSDVMAGVLAVKG 217 (301)
Q Consensus 148 ~~np~G~-~---~~l~~l~~l~~~~~~~li~D~~~~~~~~-~~~~---~~~--~di~~~S~sK~~~g~~g~~~g~~~~~~ 217 (301)
|+||||. + .++++|+++|+++|+++|+||+|+.... .... ..+ .|++ |+||+++ +|++.|++++++
T Consensus 192 ~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~--~G~r~G~~~~~~ 267 (397)
T 2ord_A 192 IQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLG--GGVPIGAVIVNE 267 (397)
T ss_dssp EECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEECS
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccC--CCcCeEEEEEch
Confidence 9999999 3 4699999999999999999999973221 1111 122 5654 7899996 467889999887
Q ss_pred hhHHHHHHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 218 ERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.. .+...........++..++++..+++.+ .+.++++.++++++.+.|++.
T Consensus 268 ~~~--~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (397)
T 2ord_A 268 RAN--VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEM 321 (397)
T ss_dssp TTC--CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred Hhc--ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 643 3322122333455666666665555433 335567777777777777653
No 143
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.89 E-value=6e-23 Score=184.19 Aligned_cols=252 Identities=16% Similarity=0.133 Sum_probs=166.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||+++ .+++|. ++|.+........+. ..+....+..+.+.+++++++++++.+++++++||++|+.+++.
T Consensus 57 ~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~---~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~ 132 (420)
T 2pb2_A 57 KEYIDFAGGIAVTALGH-CHPALVEALKSQGET---LWHTSNVFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFK 132 (420)
T ss_dssp CEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTT---CCCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHH
T ss_pred CEEEEccccccccccCC-CCHHHHHHHHHHHHh---cccccCccCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHH
Confidence 468999733 278898 455555443222111 11111112345689999999999998888888999999864444
Q ss_pred -ccC-------CC-CeEEEcCCCCccHHHHHhhhcc---------cCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 89 -LLG-------TG-EEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 89 -~~~-------~g-~~Vlv~~~~y~~~~~~~~~~~~---------~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
+.. +| ++|++.+|.|++.......... .....+..++..|++++++++++++++|++++++|
T Consensus 133 ~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~ 212 (420)
T 2pb2_A 133 LARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQG 212 (420)
T ss_dssp HHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEET
T ss_pred HHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcC
Confidence 433 66 5899999999887432211111 11123666777799999999998999999999988
Q ss_pred Ccccc----ccHHHHHHHHHHcCCEEEEeCCcCCccc-cCc-----cCCCCcEEEecccccccCCCCceeeEEEEcchhH
Q 022194 151 PRQQI----CDIRKIAEMAHAHGALLLVDNSIMSPVL-SRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (301)
Q Consensus 151 p~G~~----~~l~~l~~l~~~~~~~li~D~~~~~~~~-~~~-----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~ 220 (301)
++|.. .++++|+++|++||+++|+||+|..... ... .....|++ |+||+++ +|++.|+++++++ +
T Consensus 213 ~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~--~G~~iG~~~~~~~-l 287 (420)
T 2pb2_A 213 EGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALG--GGFPVSAMLTTQE-I 287 (420)
T ss_dssp TTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEECHH-H
T ss_pred CCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eeccccc--CCCceEEEEEhHH-H
Confidence 77762 3699999999999999999999963221 111 12235665 6899995 4678899998754 5
Q ss_pred HHHHHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 221 AKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.......+...++..++++...++.+ .+..++..++.+++.+.|++.
T Consensus 288 ~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~ 340 (420)
T 2pb2_A 288 ASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAI 340 (420)
T ss_dssp HTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 443322222333456777776666655543 355667777777787777653
No 144
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.89 E-value=4.9e-22 Score=177.10 Aligned_cols=210 Identities=15% Similarity=0.163 Sum_probs=142.7
Q ss_pred HHHHHHHHHhh--cC-C--CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE-EEEecCCCHH
Q 022194 57 RDALESLLAKL--DK-A--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV-VKRVNTCDLD 130 (301)
Q Consensus 57 ~~~l~~~l~~~--~~-~--~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~-~~~~~~~d~~ 130 (301)
..++++.++++ +| . +++++++++++++.++..++++||+|++++|.|+++.. .++..|.+ ++.++.++.+
T Consensus 77 ~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~ 152 (400)
T 3asa_A 77 LPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSFFGPNQTVAIQDPSYPAYLD----IARLTGAKEIIALPCLQEN 152 (400)
T ss_dssp CHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHHHHHCSSCEEEEEESCCHHHHH----HHHHTTCSEEEEEECCGGG
T ss_pred CHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHHHHcCCCCEEEECCCCcHHHHH----HHHHcCCcceEecccchhc
Confidence 46677777777 46 3 34445555568887777778899999999999999873 34456776 7777754211
Q ss_pred HHHhhcC--CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc-----CccCC----CCcEEEe
Q 022194 131 EVASAIG--PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLEL----GADIVMH 196 (301)
Q Consensus 131 ~l~~~l~--~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~~----~~di~~~ 196 (301)
.+...+. +++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+..... ..... +.++++.
T Consensus 153 ~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (400)
T 3asa_A 153 AFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEIN 232 (400)
T ss_dssp TTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEE
T ss_pred CcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEe
Confidence 1111111 57899999999999999986 677899999999999999999843221 11111 2469999
Q ss_pred cccccccCCCCceeeEEEEcchhH------HHHHHH-hhhhcCCCCCHHhHHHHHcccc--cHHHHHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERL------AKELYF-LQNAEGSGLAPFDCWICLRGVK--TMALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~ 267 (301)
|+||++ |++|+|.|+++++++.. ...+.. ......++.+...+.++...++ .+.+.++++.++++++.+.
T Consensus 233 s~sK~~-g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~ 311 (400)
T 3asa_A 233 SFSKPL-GFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKA 311 (400)
T ss_dssp ECCGGG-TTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred cchhhc-CCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999 56788999999876551 333322 2222223455555544444333 3455667788888889999
Q ss_pred HHhC
Q 022194 268 LASH 271 (301)
Q Consensus 268 l~~~ 271 (301)
|++.
T Consensus 312 L~~~ 315 (400)
T 3asa_A 312 LLAT 315 (400)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 9875
No 145
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.89 E-value=7.2e-23 Score=182.05 Aligned_cols=253 Identities=18% Similarity=0.153 Sum_probs=163.8
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
..++||+++. +++|. .+|.+......... . .......+..+.++++++.++++++ .+++++++||++|+.++
T Consensus 45 ~~~ld~~~~~~~~~~g~-~~~~v~~a~~~~~~--~-~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~a 120 (395)
T 1vef_A 45 NEYIDCVGGYGVANLGH-GNPEVVEAVKRQAE--T-LMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAA 120 (395)
T ss_dssp CEEEESSHHHHTCTTCB-TCHHHHHHHHHHHH--H-CCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHH
T ss_pred CEEEEccCccccccCCC-CCHHHHHHHHHHHH--h-CCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHH
Confidence 3678887332 57786 34444333211111 0 0110011234568999999999995 45677778888998644
Q ss_pred Hhcc---CCCCeEEEcCCCCccHHHHHhhhccc---------CCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccc
Q 022194 87 THLL---GTGEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (301)
Q Consensus 87 ~~~~---~~g~~Vlv~~~~y~~~~~~~~~~~~~---------~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~ 154 (301)
+..+ .+|++|++.++.|++....+...... ....+..++..|++++++++++++++|++++++||||.
T Consensus 121 l~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 200 (395)
T 1vef_A 121 LKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGV 200 (395)
T ss_dssp HHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTS
T ss_pred HHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCc
Confidence 4332 57899999999998654221111111 11125566667999999999988999998888899999
Q ss_pred ccc----HHHHHHHHHHcCCEEEEeCCcCCcc-ccCc-----cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHH
Q 022194 155 ICD----IRKIAEMAHAHGALLLVDNSIMSPV-LSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (301)
Q Consensus 155 ~~~----l~~l~~l~~~~~~~li~D~~~~~~~-~~~~-----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~ 224 (301)
+.+ +++|+++|++||+++|+||+|+... .... .....|++ |+||++++ |++.|+++++++ +.+.+
T Consensus 201 ~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--g~~~G~~~~~~~-~~~~l 275 (395)
T 1vef_A 201 RPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGG--GVPLGVAVMREE-VARSM 275 (395)
T ss_dssp EECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT--TSSCEEEEEEHH-HHHTS
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccC--CCceEEEEehHH-HHhhh
Confidence 877 9999999999999999999998321 1111 12235655 88999964 577899998765 54433
Q ss_pred HHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhCC
Q 022194 225 YFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~ 272 (301)
...........++..++++..+++.+. +..++..++++++.+.|++..
T Consensus 276 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~ 325 (395)
T 1vef_A 276 PKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIP 325 (395)
T ss_dssp CTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSC
T ss_pred ccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence 221122334456666666666665543 345677778888888888754
No 146
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.89 E-value=2.3e-22 Score=178.69 Aligned_cols=252 Identities=14% Similarity=0.080 Sum_probs=155.5
Q ss_pred eeeecCCCCCCCCc----cccCeeecceeecCCCCCCCCccccCC-CCch-HHHHHHHHHhhc-CCCceEE--ecchHHH
Q 022194 12 LLMNFSNEFDPYGA----LSTPLYQTATFKQPSATENGPYDYTRS-GNPT-RDALESLLAKLD-KADRALC--FTSGMAA 82 (301)
Q Consensus 12 ~~~~~~~~~~~~g~----~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~-~~~l~~~l~~~~-~~~~~i~--~~sG~~a 82 (301)
.+++|+ .+.|... ..+|.+......... ......|.+. |.+. ++++.+++.... ..+++++ +++|++|
T Consensus 27 ~~i~l~-~g~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a 103 (394)
T 2ay1_A 27 GKIDLG-VGVYKDATGHTPIMRAVHAAEQRMLE--TETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGA 103 (394)
T ss_dssp TCEECC-CCSCCCTTSCCCCCHHHHHHHHHHHH--HCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHH
T ss_pred cccccc-cceeeCCCCCccCcHHHHHHHHHhcC--CcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhH
Confidence 578998 5665332 223433332211100 0123345443 4333 444444442211 2235555 6677899
Q ss_pred HHHHH-hc--cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC---C----CHHHHHhhcCC---CceEEEEeCCC
Q 022194 83 LAAVT-HL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C----DLDEVASAIGP---WTKLVWVESPT 149 (301)
Q Consensus 83 i~~~~-~~--~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~---~~~~v~i~~~~ 149 (301)
+.++. .+ +.+||+|+++.|.|+++.. .++..|.+++.++. + |++++++++++ +++++++++|+
T Consensus 104 ~~~~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~ 179 (394)
T 2ay1_A 104 LRQALELARMANPDLRVFVSDPTWPNHVS----IMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCH 179 (394)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCHHHHH----HHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSC
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 86443 33 3489999999999999873 44556777777776 3 78999988864 36777889999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccccC------c--c-C-CCCcEEEecccccccCCCCceeeEEEE-
Q 022194 150 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR------P--L-E-LGADIVMHSATKFIAGHSDVMAGVLAV- 215 (301)
Q Consensus 150 np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~~------~--~-~-~~~di~~~S~sK~~~g~~g~~~g~~~~- 215 (301)
||||.+.+ +++|+++|+++|+++|+||+|+...... . . . ...++++.|+||++ |++|+|.|++++
T Consensus 180 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~ 258 (394)
T 2ay1_A 180 NPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNF-GIYRERTGCLLAL 258 (394)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTT-TCGGGCEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCC-cCcCCccceEEEE
Confidence 99999975 6789999999999999999998654420 1 1 1 22468899999999 667889999997
Q ss_pred -cchhHHH----HHHHhhhhcCCCCCHHhHHHHHcccc----------cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 216 -KGERLAK----ELYFLQNAEGSGLAPFDCWICLRGVK----------TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 216 -~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+++.+.+ .+.........+.++..++++...++ .+.+..+++.++++.+.+.|+++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 259 CADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3343322 22212112222234444444444332 24455566777777888877764
No 147
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.88 E-value=5.7e-22 Score=173.95 Aligned_cols=212 Identities=14% Similarity=0.143 Sum_probs=151.4
Q ss_pred chHHHHHHHHHhhcCCC----ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 55 PTRDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~----~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
+..++++++++++++.+ ++++++||++|+. ++..++++||+|++.++.|++.. +...+...|.+++.++.+
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 114 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGAR--MVEMAGLMGIAHHAYDCGEV 114 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHH--HHHHHHHHTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHH--HHHHHHHhCCceEEEeCCCC
Confidence 44788999999999843 3667777789986 66667789999887765444321 124445567777777753
Q ss_pred ---CHHHHHhhcCC--CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEeccccc
Q 022194 128 ---DLDEVASAIGP--WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKF 201 (301)
Q Consensus 128 ---d~~~l~~~l~~--~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK~ 201 (301)
|++++++++++ ++++|++++++||||.+.|+++|+++|++||+++|+|++|+.+.... ....+.|+++.|+||+
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~ 194 (366)
T 1m32_A 115 ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKC 194 (366)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSST
T ss_pred CCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCccc
Confidence 78999998874 58899999999999999999999999999999999999998765532 2234689999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHh------------h---h---hcCCCCCHHhHHHHHccccc------HHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFL------------Q---N---AEGSGLAPFDCWICLRGVKT------MALRVEKQ 257 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~------------~---~---~~~~~~~~~~~~~~~~~l~~------~~~~~~~~ 257 (301)
++++.| .|+++++++ +.+.+... . . ....+.+....+++..+++. +.+.++++
T Consensus 195 ~~~~~g--~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 271 (366)
T 1m32_A 195 IQGVPG--FAFVIAREQ-KLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRY 271 (366)
T ss_dssp TCCCSS--EEEEEEEHH-HHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccCCCc--eEEEEECHH-HHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHH
Confidence 877766 388888754 33322110 0 0 00134455544444444433 34566778
Q ss_pred HHHHHHHHHHHHhC
Q 022194 258 QDNAQKIAEFLASH 271 (301)
Q Consensus 258 ~~~~~~l~~~l~~~ 271 (301)
.++++++.+.|+++
T Consensus 272 ~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 272 QQNQRSLVAGMRAL 285 (366)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 88888899998875
No 148
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.88 E-value=1.4e-21 Score=176.39 Aligned_cols=221 Identities=15% Similarity=0.154 Sum_probs=150.5
Q ss_pred ccccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCC--------------eEEEc-CCCCc
Q 022194 47 YDYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGE--------------EIVAG-DDLYG 104 (301)
Q Consensus 47 ~~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~--------------~Vlv~-~~~y~ 104 (301)
..|... |.+. ++++.+++.+.+|. ++++++++|++|+. ++..++++|| +|+++ +|.|+
T Consensus 77 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~ 156 (444)
T 3if2_A 77 ANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYI 156 (444)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCG
T ss_pred hccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCcc
Confidence 345544 5444 66777777665543 35666666789986 5666788887 78875 89999
Q ss_pred cHHHHHh--hhcccCCcEEEEecC----------CCHHHHHhh---cCCCceEEEEeCCCCCcccccc---HHHHHHHHH
Q 022194 105 GTDRLLS--RVTPKTGVVVKRVNT----------CDLDEVASA---IGPWTKLVWVESPTNPRQQICD---IRKIAEMAH 166 (301)
Q Consensus 105 ~~~~~~~--~~~~~~g~~~~~~~~----------~d~~~l~~~---l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~ 166 (301)
.+..... ..+...+..+..++. .|+++++++ +.+++++|++++|+||||.+.+ +++|+++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~ 236 (444)
T 3if2_A 157 GYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAK 236 (444)
T ss_dssp GGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred chhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 8852110 134556777777763 388999988 6788999999999999999988 888999999
Q ss_pred HcCCEEEEeCCcCCcccc------CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhH
Q 022194 167 AHGALLLVDNSIMSPVLS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (301)
Q Consensus 167 ~~~~~li~D~~~~~~~~~------~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
+||+++|+||+|+.+... .+...+.++++.|+||+ +.+|++.|+++.+ +.+.+.+.......+...++..+
T Consensus 237 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~--~~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 313 (444)
T 3if2_A 237 RYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI--GLPGMRTGIIVAD-AKVIEAVSAMNAVVNLAPTRFGA 313 (444)
T ss_dssp HTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT--TCGGGCCEEEECC-HHHHHHHHHHHHHHHSSCCCHHH
T ss_pred HCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc--cCCCCceEEEEEC-HHHHHHHHHHHHhccCCCChHHH
Confidence 999999999999753211 11234678999999995 4567899999876 45656665555544444444444
Q ss_pred HHHHccccc------HHH-HHHHHHHHHHHHHHHHHh
Q 022194 241 WICLRGVKT------MAL-RVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 241 ~~~~~~l~~------~~~-~~~~~~~~~~~l~~~l~~ 270 (301)
.++...++. ..+ ..+.+.++.+.+.+.|++
T Consensus 314 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (444)
T 3if2_A 314 AIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQ 350 (444)
T ss_dssp HHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333222 112 345566677777777765
No 149
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.88 E-value=7.2e-22 Score=177.20 Aligned_cols=207 Identities=14% Similarity=0.083 Sum_probs=147.2
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHHH---HHHhccC--C---------CCeEEEcCCCCccHHHHHhhhcccCCcE
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAALA---AVTHLLG--T---------GEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai~---~~~~~~~--~---------g~~Vlv~~~~y~~~~~~~~~~~~~~g~~ 120 (301)
..++++.++++++.+ +.+++++| ++++. ++..+++ + ||+|++++|.|+++. ..++..|.+
T Consensus 72 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~ 147 (423)
T 3ez1_A 72 LPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHF----LLLQTLGFE 147 (423)
T ss_dssp CHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHH----HHHHHHTCE
T ss_pred hHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHH----HHHHHcCCE
Confidence 567888888888765 45555555 68884 4455667 7 599999999999887 445567888
Q ss_pred EEEecCC----CHHHHHhhc--CCCceEEEEe-CCCCCccccccHH---HHHHHH-HHcCCEEEEeCCcCCccccC----
Q 022194 121 VKRVNTC----DLDEVASAI--GPWTKLVWVE-SPTNPRQQICDIR---KIAEMA-HAHGALLLVDNSIMSPVLSR---- 185 (301)
Q Consensus 121 ~~~~~~~----d~~~l~~~l--~~~~~~v~i~-~~~np~G~~~~l~---~l~~l~-~~~~~~li~D~~~~~~~~~~---- 185 (301)
++.++.+ |++++++++ .+++++|++. +|+||||.+.+.+ +|+++| +++|+++|+||+|....+..
T Consensus 148 ~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~ 227 (423)
T 3ez1_A 148 LLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRA 227 (423)
T ss_dssp EEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCC
T ss_pred EEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCC
Confidence 8888764 899999999 5788998765 8999999998755 888888 99999999999998432211
Q ss_pred ----c-------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc-----
Q 022194 186 ----P-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----- 249 (301)
Q Consensus 186 ----~-------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 249 (301)
. ...+.++++.|+||++ + +|++.|+++.++ .+.+.+.......+...++..+.++...++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~-~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 304 (423)
T 3ez1_A 228 EPVNFVVLARDAGYPDRAFVFASTSKIT-F-AGAGLGFVASSE-DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGL 304 (423)
T ss_dssp CCCCHHHHHHHHTCTTSEEEEEESTTTS-C-SSSSCEEEEECH-HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHH
T ss_pred CCcchhhhhhccCCCCeEEEEeCchhhc-c-CCcceEEEEeCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchH
Confidence 0 1346789999999984 4 478899999875 5666666666655666666655554333222
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHh
Q 022194 250 ---MALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 250 ---~~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.+.++.+.++.+.+.+.|.+
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~~l~~ 328 (423)
T 3ez1_A 305 EGLMRDHAAIIAPKFRAVDEVLRA 328 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233444555555556655544
No 150
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.88 E-value=1e-21 Score=176.33 Aligned_cols=207 Identities=15% Similarity=0.091 Sum_probs=146.5
Q ss_pred HHHHHHHHHhhcCCC-ceEEecch-HHHH--HHHH-hccCC------------CCeEEEcCCCCccHHHHHhhhcccCCc
Q 022194 57 RDALESLLAKLDKAD-RALCFTSG-MAAL--AAVT-HLLGT------------GEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-~~i~~~sG-~~ai--~~~~-~~~~~------------g~~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
..++++.++++++.+ +.+++++| ++++ .++. .+.++ +|+|++++|.|+++. ..++..|.
T Consensus 78 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~----~~~~~~g~ 153 (422)
T 3d6k_A 78 IADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF----TITEHFGF 153 (422)
T ss_dssp CHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH----HHHHHHTC
T ss_pred CHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH----HHHHHcCC
Confidence 466777777777765 55666666 5776 4443 34444 347999999999997 44556688
Q ss_pred EEEEecCC----CHHHHHhhcCC-CceEEE-EeCCCCCccccccHH---HHHHHHH-HcCCEEEEeCCcCCccc--c---
Q 022194 120 VVKRVNTC----DLDEVASAIGP-WTKLVW-VESPTNPRQQICDIR---KIAEMAH-AHGALLLVDNSIMSPVL--S--- 184 (301)
Q Consensus 120 ~~~~~~~~----d~~~l~~~l~~-~~~~v~-i~~~~np~G~~~~l~---~l~~l~~-~~~~~li~D~~~~~~~~--~--- 184 (301)
+++.++.+ |++++++++++ ++++|+ +++|+||||.+.+.+ +|+++|+ ++|+++|+||+|+...+ .
T Consensus 154 ~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~ 233 (422)
T 3d6k_A 154 EMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPI 233 (422)
T ss_dssp EEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCC
T ss_pred EEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCC
Confidence 88888763 78999999975 788888 689999999998755 7888888 99999999999974111 1
Q ss_pred --Cc-------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc------
Q 022194 185 --RP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------ 249 (301)
Q Consensus 185 --~~-------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 249 (301)
.. ...+.++++.||||+ ++ +|+|.|+++++ +.+.+.+.........+.+...+.++...++.
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~S~SK~-~~-~GlriG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~ 310 (422)
T 3d6k_A 234 VHNVIEFAQAAGNPNRFWFMSSTSKI-TH-AGSGVSFFASS-KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKA 310 (422)
T ss_dssp CCCHHHHHHHTTCTTCEEEEEESTTT-SC-TTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHH
T ss_pred CcChhhHhhccCCCCcEEEEcChhhh-cC-cccceEEEEeC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHH
Confidence 11 134678999999998 35 47899999987 45666666665555556667666665555443
Q ss_pred -HHHHHHHHHHHHHHHHHHHHh
Q 022194 250 -MALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 250 -~~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.+.++.+.++.+.+.+.|++
T Consensus 311 ~~~~~~~~~~~~~~~l~~~L~~ 332 (422)
T 3d6k_A 311 HMLKHAASLAPKFERVLEILDS 332 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 333445555666667677654
No 151
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.88 E-value=1.3e-21 Score=171.48 Aligned_cols=211 Identities=10% Similarity=0.062 Sum_probs=150.9
Q ss_pred hHHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 56 TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
..+++++++++++|.+ ++++++||++++. ++.+++++ .+++..+.+++. .+...++..|.+++.++.+
T Consensus 44 ~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~--~~i~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~ 119 (362)
T 3ffr_A 44 VYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK--KSFHCVNGSFSK--RFYEFAGELGREAYKEEAAFGKG 119 (362)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS--EEEEEECSHHHH--HHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC--cEEEEcCcHHHH--HHHHHHHHhCCCeEEEecCCCCC
Confidence 3788999999999863 3556667789986 56667777 444444444432 1224566778888888764
Q ss_pred -CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc-CCEEEEeCCcCCccccCccCCCCcEEEecccccccCC
Q 022194 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGH 205 (301)
Q Consensus 128 -d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~-~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~ 205 (301)
|+++++ +.+++++|++++|+||||.+.|+++|+++|++| |+++|+|++|+.+........ +|+++.|+||+++++
T Consensus 120 ~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~~~ 196 (362)
T 3ffr_A 120 FYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFGLP 196 (362)
T ss_dssp CCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTCCC
T ss_pred CCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccCCC
Confidence 778887 678899999999999999999999999999999 999999999987765433322 899999999999768
Q ss_pred CCceeeEEEEcchhHHHHHHHhhh---------------------hcCCCCCHHhHHHHHccccc-----HHHHHHHHHH
Q 022194 206 SDVMAGVLAVKGERLAKELYFLQN---------------------AEGSGLAPFDCWICLRGVKT-----MALRVEKQQD 259 (301)
Q Consensus 206 ~g~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~ 259 (301)
+|+ |+++.+++ +.+.+..... ....+.+.....++..+++. +.+.+++..+
T Consensus 197 ~G~--g~~~~~~~-~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 273 (362)
T 3ffr_A 197 AGL--GVWILNDR-VIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEE 273 (362)
T ss_dssp SCC--EEEEEEHH-HHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred Cce--EEEEECHH-HHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 774 77777654 4444433322 00233444444443333332 4667788888
Q ss_pred HHHHHHHHHHhCCCcce
Q 022194 260 NAQKIAEFLASHPRVKK 276 (301)
Q Consensus 260 ~~~~l~~~l~~~~~v~~ 276 (301)
+++++.+.|+++|++..
T Consensus 274 ~~~~l~~~L~~~~g~~~ 290 (362)
T 3ffr_A 274 KAALINTYIESSKVFSF 290 (362)
T ss_dssp HHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHHHHHccCcee
Confidence 99999999999877643
No 152
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.88 E-value=4.3e-22 Score=179.61 Aligned_cols=252 Identities=15% Similarity=0.104 Sum_probs=167.9
Q ss_pred ceeeecCCCCCCCCcc-ccCeeecceeecCCCCCCCCccccC-CCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGAL-STPLYQTATFKQPSATENGPYDYTR-SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~-~~p~~~~~~~~~~~~~~~~~~~y~~-~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||.++.++++.. ++|.+......+.+ . .. .+++ +..+.+.++++.++++++.+++++++||++|+.+++.
T Consensus 76 ~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~--~-~~-~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~ 151 (439)
T 2oat_A 76 RKYFDFLSSYSAVNQGHCHPKIVNALKSQVD--K-LT-LTSRAFYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACK 151 (439)
T ss_dssp CEEEESSGGGGTTTTCBTCHHHHHHHHHHHT--T-CS-CCCTTSEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHH
T ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHH--h-cC-cccCccCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHH
Confidence 4789998666665544 45555544322211 1 11 1111 1234589999999999998888889999999864433
Q ss_pred c-c---------CCC-CeEEEcCCCCccHHHHHhhhcc---------cCCcEEEEecCCCHHHHHhhcC-CCceEEEEeC
Q 022194 89 L-L---------GTG-EEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIG-PWTKLVWVES 147 (301)
Q Consensus 89 ~-~---------~~g-~~Vlv~~~~y~~~~~~~~~~~~---------~~g~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~ 147 (301)
+ . .+| |+|++.++.||+.......... .....+..++..|+++++++++ +++++|+++.
T Consensus 152 ~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep 231 (439)
T 2oat_A 152 LARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEP 231 (439)
T ss_dssp HHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECS
T ss_pred HHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEEC
Confidence 3 2 356 8999999999886432212111 1114566777789999999994 6788888887
Q ss_pred CCCCccccc----cHHHHHHHHHHcCCEEEEeCCcCCccc-cCc---cCC--CCcEEEecccccccCCCC-ceeeEEEEc
Q 022194 148 PTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMSPVL-SRP---LEL--GADIVMHSATKFIAGHSD-VMAGVLAVK 216 (301)
Q Consensus 148 ~~np~G~~~----~l~~l~~l~~~~~~~li~D~~~~~~~~-~~~---~~~--~~di~~~S~sK~~~g~~g-~~~g~~~~~ 216 (301)
.++++|.+. ++++|.++|++||+++|+||+|..... ... ... ..|++ |++|++++ | +++|+++++
T Consensus 232 ~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~--G~~~~G~v~~~ 307 (439)
T 2oat_A 232 IQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSG--GLYPVSAVLCD 307 (439)
T ss_dssp SBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--TSSCCEEEEEC
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--EecccccC--CCCCeEEEEEC
Confidence 777889876 699999999999999999999953211 111 112 34654 89999964 5 678999987
Q ss_pred chhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 217 GERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
+ .+.+.+.........+.++..++++...++.+. +..++..++.+++.+.|++.
T Consensus 308 ~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 363 (439)
T 2oat_A 308 D-DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL 363 (439)
T ss_dssp H-HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTS
T ss_pred H-HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 5 444433322233344567777777766666553 35577778888888888774
No 153
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.88 E-value=3.9e-21 Score=170.96 Aligned_cols=207 Identities=16% Similarity=0.131 Sum_probs=157.1
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-----
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----- 127 (301)
+...++++.++++++.+++++++||++|+. ++..+ +++||+|++++|.|+++...+ ...|.+++.++.+
T Consensus 32 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~ 107 (394)
T 1o69_A 32 EFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI----CYLKAKPVFIDCDETYNI 107 (394)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH----HHTTCEEEEECBCTTSSB
T ss_pred hHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH----HHcCCEEEEEEeCCCCCc
Confidence 568999999999999988888899999996 55666 789999999999999997443 4578888888854
Q ss_pred CHHHHHhhcCC---CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCcc---C-CCCcEEEecccc
Q 022194 128 DLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL---E-LGADIVMHSATK 200 (301)
Q Consensus 128 d~~~l~~~l~~---~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~---~-~~~di~~~S~sK 200 (301)
|++++++++++ ++++|++++ |+|...++++|.++|+++|+++|+|++|+.+...... . .+.|+...|.+|
T Consensus 108 d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K 184 (394)
T 1o69_A 108 DVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNK 184 (394)
T ss_dssp CHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTS
T ss_pred CHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCc
Confidence 78999988875 789999885 7999999999999999999999999999865432211 1 134555556689
Q ss_pred cccCCCCceeeEEEEcchhHHHHHHHhhhhcC--------------CCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHH
Q 022194 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEG--------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 266 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 266 (301)
.+++ . ++|+++++++.+.+.+........ ..+++..+.+.+..++.+.+..++..++.+++.+
T Consensus 185 ~l~~-~--~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~ 261 (394)
T 1o69_A 185 IITT-S--GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKE 261 (394)
T ss_dssp SSCC-S--SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred cCCC-C--CceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8843 2 579999976666665554332210 0034455555555567788888889999999999
Q ss_pred HHHhC
Q 022194 267 FLASH 271 (301)
Q Consensus 267 ~l~~~ 271 (301)
.|++.
T Consensus 262 ~L~~~ 266 (394)
T 1o69_A 262 FLGEY 266 (394)
T ss_dssp HHTTT
T ss_pred Hhccc
Confidence 99875
No 154
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.88 E-value=2.3e-22 Score=181.02 Aligned_cols=251 Identities=14% Similarity=0.125 Sum_probs=158.3
Q ss_pred ceeeecCCCCCCCCcc-ccCeeecceeecCCCCCCCCccccC-CCCchHHHHHHHHHhhcCCCceEEecchHHHHHHHHh
Q 022194 11 TLLMNFSNEFDPYGAL-STPLYQTATFKQPSATENGPYDYTR-SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~-~~p~~~~~~~~~~~~~~~~~~~y~~-~g~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~~~~~ 88 (301)
..++||.++.+++... ++|.+......+.+. .. .+++ +..+.+.++++.++++++.+++++++||++|+.+++.
T Consensus 65 ~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~--~~--~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~ 140 (433)
T 1z7d_A 65 KRYYDFLSAYSSVNQGHCHPNILNAMINQAKN--LT--ICSRAFFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYK 140 (433)
T ss_dssp CEEEESSHHHHTTTTCBTCHHHHHHHHHHHTT--CS--CCCTTSEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHH
T ss_pred CEEEEcccchhhcccCCCCHHHHHHHHHHHHh--CC--CccCCcCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHH
Confidence 4688998545554443 445554443222111 11 1121 1234589999999999998888899999999864433
Q ss_pred cc----------CCC-CeEEEcCCCCccHHHHHhhhcc---------cCCcEEEEecCCCHHHHHhhc-CCCceEEEEeC
Q 022194 89 LL----------GTG-EEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAI-GPWTKLVWVES 147 (301)
Q Consensus 89 ~~----------~~g-~~Vlv~~~~y~~~~~~~~~~~~---------~~g~~~~~~~~~d~~~l~~~l-~~~~~~v~i~~ 147 (301)
++ .+| ++|++.++.||+.......... .....+..++..|++++++++ .+++++|+++.
T Consensus 141 ~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep 220 (433)
T 1z7d_A 141 LCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEP 220 (433)
T ss_dssp HHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTTEEEEEECS
T ss_pred HHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEEC
Confidence 32 367 9999999999987432111111 001355667777999999999 57788888887
Q ss_pred CCCCccccc----cHHHHHHHHHHcCCEEEEeCCcCCccc-cCc---cC--CCCcEEEecccccccCCCC-ceeeEEEEc
Q 022194 148 PTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMSPVL-SRP---LE--LGADIVMHSATKFIAGHSD-VMAGVLAVK 216 (301)
Q Consensus 148 ~~np~G~~~----~l~~l~~l~~~~~~~li~D~~~~~~~~-~~~---~~--~~~di~~~S~sK~~~g~~g-~~~g~~~~~ 216 (301)
.++++|.+. ++++|.++|++||+++|+||+|..... ... .. ...|++ |++|+++ +| +++|+++++
T Consensus 221 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~--~G~~~~G~v~~~ 296 (433)
T 1z7d_A 221 IQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALS--GGHYPISAVLAN 296 (433)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG--TTSSCCEEEEEC
T ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECcccc--CCCCCeEEEEEC
Confidence 777889875 699999999999999999999963211 111 11 234554 8999995 36 778999987
Q ss_pred chhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 217 GERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
+ .+.+.+...........++..++++...++.+. +..++..++.+++.+.|++
T Consensus 297 ~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 351 (433)
T 1z7d_A 297 D-DIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKR 351 (433)
T ss_dssp H-HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 5 444433222223334567777777766666543 3456667777777777765
No 155
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.88 E-value=2.2e-21 Score=173.59 Aligned_cols=218 Identities=17% Similarity=0.183 Sum_probs=145.2
Q ss_pred cccCC-CCch-HHHHHHHHHhhcCC----CceEEecchHHHHH-HHHhccCCCC-----eEEEc-CCCCccHHHHHh--h
Q 022194 48 DYTRS-GNPT-RDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGE-----EIVAG-DDLYGGTDRLLS--R 112 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~l~~~~~~----~~~i~~~sG~~ai~-~~~~~~~~g~-----~Vlv~-~~~y~~~~~~~~--~ 112 (301)
.|... |.+. ++++.+++.+.+|. ++++++++|++|+. ++..++++|| +|+++ .|.|+++..... .
T Consensus 70 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~ 149 (417)
T 3g7q_A 70 NYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDD 149 (417)
T ss_dssp STTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----C
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchh
Confidence 45543 4333 55666666555443 35666666689996 5666788887 89997 999998863321 1
Q ss_pred hcccCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 113 VTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 113 ~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
.....+..+..++.+ |+++++ +.+++++|++++|+||||.+.+ +++|+++|++||+++|+||+|+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~ 227 (417)
T 3g7q_A 150 LFVSARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP 227 (417)
T ss_dssp CEEECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT
T ss_pred hhccccCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc
Confidence 223345566666543 777777 6778999999999999999987 88999999999999999999975321
Q ss_pred c------CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc---c---HH
Q 022194 184 S------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---T---MA 251 (301)
Q Consensus 184 ~------~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~---~~ 251 (301)
. .+...+.++++.|+|| + +.+|++.|+++.+ +.+.+.+...........++..+.++...++ . ..
T Consensus 228 ~~~~~~~~~~~~~~~i~~~s~sK-~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 304 (417)
T 3g7q_A 228 GIIFSEARPLWNPNIILCMSLSK-L-GLPGSRCGIIIAN-DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSE 304 (417)
T ss_dssp CCBCSCCCCCCCTTEEEEEESGG-G-TCTTSCCEEEECC-HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHH
T ss_pred cccccccccCCCCCEEEEEechh-c-cCCCcceEEEEeC-HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHH
Confidence 1 1223467899999999 5 5678899999886 4566666665555554445544444433322 1 11
Q ss_pred H-HHHHHHHHHHHHHHHHHh
Q 022194 252 L-RVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 252 ~-~~~~~~~~~~~l~~~l~~ 270 (301)
+ .++.+.++.+.+.+.|++
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~ 324 (417)
T 3g7q_A 305 TVIKPFYYQRVQQTIAIIRR 324 (417)
T ss_dssp HTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 2 345566777778888776
No 156
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.88 E-value=6e-22 Score=176.60 Aligned_cols=248 Identities=21% Similarity=0.159 Sum_probs=162.5
Q ss_pred ceeeecCCCCCCCCccccCeeecceeecCCCCCCCCcccc--CC--CCchHHHHH----HHHHhhcCCCce-EEecchHH
Q 022194 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYT--RS--GNPTRDALE----SLLAKLDKADRA-LCFTSGMA 81 (301)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~--~~--g~~~~~~l~----~~l~~~~~~~~~-i~~~sG~~ 81 (301)
..+++|.++++++ +|.+....... ........|. .+ |.+..+.++ +++++++|.+.. +++++|++
T Consensus 23 ~~~i~~~~~~~~~----~~~v~~a~~~~--~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~ 96 (407)
T 2dkj_A 23 REGLELIASENFV----SKQVREAVGSV--LTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQ 96 (407)
T ss_dssp HTSEECCTTCCCC----CHHHHHHHTSG--GGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHH
T ss_pred hcceeeccCCCCC----CHHHHHHHHhh--hhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchHH
Confidence 4678887677766 44444332111 1111122332 22 555433333 589999998855 66789998
Q ss_pred HHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc--EEEEecC------CCHHHHHhhcCC-CceEEEEeCCCCC
Q 022194 82 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNT------CDLDEVASAIGP-WTKLVWVESPTNP 151 (301)
Q Consensus 82 ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~--~~~~~~~------~d~~~l~~~l~~-~~~~v~i~~~~np 151 (301)
|+. ++..++++||+|++++|.|+++.... ..+...|. ....++. .|++++++++++ ++++|++++|+||
T Consensus 97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~ 175 (407)
T 2dkj_A 97 ANMAVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP 175 (407)
T ss_dssp HHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC
T ss_pred HHHHHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC
Confidence 885 55667899999999999998873111 22233333 4444431 278999999874 7899999889997
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-----CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHH
Q 022194 152 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 226 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~ 226 (301)
...++++|.++|+++|+++|+||+|+.|... .... ..|+++.|+||+++|+ ++|+++++++.+.+.+..
T Consensus 176 --~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g~---~~G~~~~~~~~~~~~l~~ 249 (407)
T 2dkj_A 176 --RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTLRGP---RGGLILSNDPELGKRIDK 249 (407)
T ss_dssp --SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGGCCC---SCEEEEESCHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccCCCC---CceEEEECCHHHHHHHHh
Confidence 6778999999999999999999999864321 1112 3799999999988654 469999885556665554
Q ss_pred hhhhc-CCCCCHHhHHHHHccc-----ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 227 LQNAE-GSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 227 ~~~~~-~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..... ..+.++....++..++ +.+.+..++..++++++.+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 300 (407)
T 2dkj_A 250 LIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR 300 (407)
T ss_dssp HHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 43222 2334443332322322 234667788888889999999876
No 157
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.88 E-value=4.1e-22 Score=177.09 Aligned_cols=217 Identities=17% Similarity=0.144 Sum_probs=143.3
Q ss_pred ccccCC-CC--chHHHHHHHHHhhcC-------CCceEEecch-HHHHH-HHHhccCCCC----eEEEcCCCCccHHHHH
Q 022194 47 YDYTRS-GN--PTRDALESLLAKLDK-------ADRALCFTSG-MAALA-AVTHLLGTGE----EIVAGDDLYGGTDRLL 110 (301)
Q Consensus 47 ~~y~~~-g~--~~~~~l~~~l~~~~~-------~~~~i~~~sG-~~ai~-~~~~~~~~g~----~Vlv~~~~y~~~~~~~ 110 (301)
..|.+. |. ....++++.++++++ .++.+++++| ++++. ++..++++|| +|++++|.|..+.
T Consensus 57 ~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~--- 133 (391)
T 3bwn_A 57 SYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYV--- 133 (391)
T ss_dssp SSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHH---
T ss_pred hcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHH---
Confidence 456554 54 011444444444443 2345666666 58886 5666789999 9999999999987
Q ss_pred hhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCC
Q 022194 111 SRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLEL 189 (301)
Q Consensus 111 ~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~ 189 (301)
..++..|.+++.++.+ .+.++ .+++++|++++|+||||.+.+ +|++.++++++++|+||+|..+.... ....
T Consensus 134 -~~~~~~g~~~~~~~~d-~~~l~---~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~ 206 (391)
T 3bwn_A 134 -EETTYVRSGMYKWEGD-AWGFD---KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYTPITRRQ 206 (391)
T ss_dssp -HHHHTTCBTTEEEEEE-STTCC---CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTSCCCCCB
T ss_pred -HHHHHcCCeEEEecCC-HHHcC---CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCCccccCC
Confidence 4445566666665543 22332 357899999999999999986 55542233349999999998532111 1134
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc--------------ccHHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV--------------KTMALRVE 255 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------------~~~~~~~~ 255 (301)
+.+++++||||++ |++|+|.|++++.++.+.+.+.........+.+...+.++...+ +.+.+.++
T Consensus 207 ~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
T 3bwn_A 207 DHDIMLFTFSKIT-GHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGRE 285 (391)
T ss_dssp CCSEEEEEHHHHH-SCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHH
T ss_pred CCeEEEEechhhc-CCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHH
Confidence 6789999999999 67889999999855667676666555434455555444443333 23566677
Q ss_pred HHHHHHHHHHHHHHhCCCc
Q 022194 256 KQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~v 274 (301)
.+.++++.+.+.|++++++
T Consensus 286 ~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 286 MMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp HHHHHHHHHHHHHHTCSSE
T ss_pred HHHHHHHHHHHHHHhCCCc
Confidence 8888889999999987644
No 158
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.88 E-value=5.2e-21 Score=169.83 Aligned_cols=212 Identities=19% Similarity=0.190 Sum_probs=160.8
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc-------cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEec
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~-------~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~ 125 (301)
.+..+++++.++++++.++.+++++|++|+. ++..+ +++||+|+++.+.|+++... +...|.+++.++
T Consensus 33 ~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~----~~~~g~~~~~~~ 108 (390)
T 3b8x_A 33 GEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYP----LQQYGLRVKFVD 108 (390)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEEC
T ss_pred ChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEe
Confidence 4568999999999999999999999998886 55666 67899999999999998744 345788888887
Q ss_pred CC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCC--cEEEec
Q 022194 126 TC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHS 197 (301)
Q Consensus 126 ~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~--di~~~S 197 (301)
.+ |++++++++++++++|++++ ++|...++++|.++|+++|+++|+|++|+.+........+. |+.+.|
T Consensus 109 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s 185 (390)
T 3b8x_A 109 IDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFS 185 (390)
T ss_dssp BCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEE
T ss_pred cCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEEEE
Confidence 64 78999999998899999873 57788999999999999999999999999776554444555 444443
Q ss_pred c--cccccCCCCceeeEEEEcchhHHHHHHHhhhh-----------------------------cC--CCCCHHhHHHHH
Q 022194 198 A--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-----------------------------EG--SGLAPFDCWICL 244 (301)
Q Consensus 198 ~--sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-----------------------------~~--~~~~~~~~~~~~ 244 (301)
+ +|.+.++ .+|+++++++.+.+.+...... .+ ..+++..+++.+
T Consensus 186 ~~~~k~~~~g---~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l 262 (390)
T 3b8x_A 186 SFYSNHIATM---EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGI 262 (390)
T ss_dssp CCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHH
T ss_pred ccCCCCCccC---CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHH
Confidence 2 3444332 3688888876665544432211 01 115666666666
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 245 ~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
..++.+.+..++..++++++.+.|++++++.
T Consensus 263 ~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 293 (390)
T 3b8x_A 263 EQLKKLPRFISVRRKNAEYFLDKFKDHPYLD 293 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 6677777888888999999999998877653
No 159
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.9e-22 Score=183.56 Aligned_cols=215 Identities=19% Similarity=0.233 Sum_probs=157.0
Q ss_pred HHHHHHHHHhhcCCC----ceEEecchHHHHH-HHHhccC-----CC---CeEEEcCCCCccHHHHHhhhcccCCcEEEE
Q 022194 57 RDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLG-----TG---EEIVAGDDLYGGTDRLLSRVTPKTGVVVKR 123 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~----~~i~~~sG~~ai~-~~~~~~~-----~g---~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~ 123 (301)
++++.+++++++|.+ ..+++++|++|+. ++..+.+ +| ++|+++.+.|.++. ..+...|++++.
T Consensus 109 ~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~----~~~~~~G~~~~~ 184 (497)
T 3mc6_A 109 ESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFD----KAAYYFGMKLRH 184 (497)
T ss_dssp HHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHH----HHHHHSCCEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHH----HHHHHcCCeEEE
Confidence 667888899999876 4666777788885 4444433 45 89999999999886 555667889988
Q ss_pred ecCC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc-------------c
Q 022194 124 VNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-------------S 184 (301)
Q Consensus 124 ~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~-------------~ 184 (301)
++.+ |++++++++++++++|++++|+||+|.+.|+++|+++|+++|+++|+|++|+.+.. .
T Consensus 185 v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~ 264 (497)
T 3mc6_A 185 VELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL 264 (497)
T ss_dssp ECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC
T ss_pred EecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccc
Confidence 8854 58899999999999999999999999999999999999999999999999984321 1
Q ss_pred CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh-cCC-----C-CC------HHhHHHHHcccc--c
Q 022194 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGS-----G-LA------PFDCWICLRGVK--T 249 (301)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-~~~-----~-~~------~~~~~~~~~~l~--~ 249 (301)
.....++|+++.|+||++.++.+ .|+++++++.+.......... .+. . .. ..++++++..+. .
T Consensus 265 ~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~ 342 (497)
T 3mc6_A 265 DFRVPGVTSISCDTHKYGFAPKG--SSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENG 342 (497)
T ss_dssp STTSTTCCEEEEETTTTTCCCSS--CEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEECchhhcCCCCC--ceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHH
Confidence 23345789999999999866654 588888876553321111111 000 0 00 223444444432 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCcceE
Q 022194 250 MALRVEKQQDNAQKIAEFLAS-HPRVKKV 277 (301)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~-~~~v~~v 277 (301)
+.+..++..++++++.+.|++ .+++..+
T Consensus 343 ~~~~~~~~~~~~~~l~~~L~~~~~g~~~~ 371 (497)
T 3mc6_A 343 YIESCQEIVGAAMKFKKYIQENIPDLDIM 371 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 466778889999999999999 5776544
No 160
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.88 E-value=5.3e-21 Score=172.41 Aligned_cols=212 Identities=18% Similarity=0.132 Sum_probs=158.9
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhc---------cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEe
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL---------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~---------~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~ 124 (301)
+...++++.++++++.++.+++++|++|+. ++..+ +++||+|+++.+.|+++...+ ...|.+++.+
T Consensus 62 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~v 137 (437)
T 3bb8_A 62 RFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIPVFV 137 (437)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEEEEC
T ss_pred hHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEE
Confidence 568999999999999999999999999886 55555 788999999999999997444 4578888888
Q ss_pred cCC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCC--CcEEEe
Q 022194 125 NTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMH 196 (301)
Q Consensus 125 ~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~--~di~~~ 196 (301)
+.+ |++++++++++++++|++++ ++|...++++|.++|+++|+++|+|++|+.+........+ .|+++.
T Consensus 138 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~ 214 (437)
T 3bb8_A 138 DVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTV 214 (437)
T ss_dssp CEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEE
T ss_pred eccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccCEEEE
Confidence 753 78999999998899999875 3566689999999999999999999999977654333344 689999
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHhhhh-------------------------------------cC--CCCCH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-------------------------------------EG--SGLAP 237 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-------------------------------------~~--~~~~~ 237 (301)
||+|...- ++.++|+++.+++.+...+...... .+ ..+++
T Consensus 215 s~~~~k~l-~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 293 (437)
T 3bb8_A 215 SFYPAKHI-TMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITD 293 (437)
T ss_dssp ECSTTSSS-CCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBH
T ss_pred ECcCCcCC-CCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCH
Confidence 98766533 3346899998866554433221100 00 11235
Q ss_pred HhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCc
Q 022194 238 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v 274 (301)
..+.+.+..++.+.+..++..++++++.+.|++.+++
T Consensus 294 ~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 330 (437)
T 3bb8_A 294 MQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADF 330 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 5555555556666667777788888899999887654
No 161
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=3e-21 Score=172.62 Aligned_cols=206 Identities=20% Similarity=0.176 Sum_probs=139.5
Q ss_pred HHHHHHHhhcCCCce-EEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhh-hcccCCcEEEEecC-----CCHH
Q 022194 59 ALESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNT-----CDLD 130 (301)
Q Consensus 59 ~l~~~l~~~~~~~~~-i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~-~~~~~g~~~~~~~~-----~d~~ 130 (301)
.+++.++++++.+.. +++++|++++. ++..++++||+|++++|.|+++...... .....+..+..++. .|++
T Consensus 75 ~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 154 (417)
T 3n0l_A 75 LAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYE 154 (417)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHH
T ss_pred HHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHH
Confidence 445588899998754 78899998885 6677899999999999999876532111 11123445555554 3899
Q ss_pred HHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc-----cCccCCCCcEEEecccccccC
Q 022194 131 EVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 131 ~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~di~~~S~sK~~~g 204 (301)
+++++++ .++++|++++++| |...++++|+++|++||+++|+|++|..+.. ..... +.|+++.|+||+++|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g 231 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTLRG 231 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTTCS
T ss_pred HHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCccccCC
Confidence 9999997 6899999888775 8899999999999999999999999865433 12222 479999999999965
Q ss_pred CCCceeeEEEEcchhHHHHHHHhhhhcC-CCCCHHhHHHHHcc----c-ccHHHHHHHHHHHHHHHHHHHHh
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRG----V-KTMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----l-~~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
+ ++|+++++++.+.+.+........ .+.......+...+ . +.+.+..++..++++++.+.|++
T Consensus 232 ~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 300 (417)
T 3n0l_A 232 P---RGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD 300 (417)
T ss_dssp C---SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---CeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 4 579999886666666554433222 22333332222111 1 33567778888888999999987
No 162
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.87 E-value=7.9e-22 Score=171.59 Aligned_cols=198 Identities=9% Similarity=0.065 Sum_probs=145.1
Q ss_pred HHHHHHHHHhhcC---CC--ceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 57 RDALESLLAKLDK---AD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~---~~--~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
..++++.++++++ .+ +++++++|++++..+...+ ||+|+++ |.|+++. ..++..|.+++.++.+
T Consensus 58 ~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~--gd~Vl~~-p~y~~~~----~~~~~~g~~~~~v~~~~~~~ 130 (335)
T 1uu1_A 58 DEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF--DRSVFFP-PTYSCYR----IFAKAVGAKFLEVPLTKDLR 130 (335)
T ss_dssp CHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--SEEEECS-SSCHHHH----HHHHHHTCEEEECCCCTTSC
T ss_pred hHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--CCcEEEC-CCcHHHH----HHHHHcCCeEEEeccCCCCC
Confidence 6778888888887 43 4455555579997665555 8999999 9999886 4445678888888764
Q ss_pred -CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc----cCccCCCCcEEEecccccc
Q 022194 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL----SRPLELGADIVMHSATKFI 202 (301)
Q Consensus 128 -d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~----~~~~~~~~di~~~S~sK~~ 202 (301)
|++++ +++++|++++|+||||.+.+.+++.++++..| ++|+||+|+.... ......+.++++.|+||++
T Consensus 131 ~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 204 (335)
T 1uu1_A 131 IPEVNV-----GEGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAF 204 (335)
T ss_dssp CCCCCC-----CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTT
T ss_pred CCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhc
Confidence 33333 57899999999999999999999999999888 9999999974221 1112345789999999999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccccc---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
|++|++.|+++++ +.+.+.+..... .++.++..+.++...++. +.+.++++.++++++.+.|+++
T Consensus 205 -g~~G~r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 205 -SLAAQRVGYVVAS-EKFIDAYNRVRL--PFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp -TCGGGCCEEEEEC-HHHHHHHHHHSC--TTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcccCeEEEEeC-HHHHHHHHHhcC--CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5578899999996 455565544332 245666666665555443 4566677888888888888875
No 163
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.87 E-value=7.5e-22 Score=179.32 Aligned_cols=213 Identities=9% Similarity=0.051 Sum_probs=151.7
Q ss_pred hHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhccCCCC---eEEEcCCCCccHHHHHhhhcccCCcEE-----EEe
Q 022194 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGE---EIVAGDDLYGGTDRLLSRVTPKTGVVV-----KRV 124 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~~~g~---~Vlv~~~~y~~~~~~~~~~~~~~g~~~-----~~~ 124 (301)
..+++++++++++|.+ ++++++++++++. ++..++++++ +|+++.|.|++....+...++..|.++ ...
T Consensus 112 ~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~ 191 (465)
T 3e9k_A 112 GDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIK 191 (465)
T ss_dssp TTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEEC
T ss_pred hHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEe
Confidence 3678999999999976 4455555578886 5566766655 499999999997766666666677663 223
Q ss_pred cCC-----CHHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCc-cCCCCcEEE
Q 022194 125 NTC-----DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVM 195 (301)
Q Consensus 125 ~~~-----d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~-~~~~~di~~ 195 (301)
+.+ |+++++++++ +++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+..... .+.++|+++
T Consensus 192 ~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~ 271 (465)
T 3e9k_A 192 PREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFAC 271 (465)
T ss_dssp CCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEE
T ss_pred cCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEE
Confidence 322 7899999996 6789999999999999999999999999999999999999998876532 345799999
Q ss_pred eccccccc-CCCCceeeEEEEcchhHHHHHHHhh-------------------------hhcCCCCCHHhHHHHHccccc
Q 022194 196 HSATKFIA-GHSDVMAGVLAVKGERLAKELYFLQ-------------------------NAEGSGLAPFDCWICLRGVKT 249 (301)
Q Consensus 196 ~S~sK~~~-g~~g~~~g~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~l~~ 249 (301)
.|++|++. ||.+ .|+++.+++.. +.+.... .....+.+.....++..+++.
T Consensus 272 ~s~~K~l~~gp~~--~g~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~ 348 (465)
T 3e9k_A 272 WCSYKYLNAGAGG--IAGAFIHEKHA-HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI 348 (465)
T ss_dssp ECSSSTTCCCTTC--CCEEEECGGGT-TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred ECcccccccCCCc--eEEEEEcHHHH-hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence 99999994 5543 47777765432 2111000 000013344444444444433
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHhC
Q 022194 250 -----MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 250 -----~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.+++..++++++.+.|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 349 FKQATMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 4556677778888888888774
No 164
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.87 E-value=2.8e-21 Score=177.33 Aligned_cols=216 Identities=11% Similarity=0.055 Sum_probs=156.3
Q ss_pred HHHHHHHHHhhcCCC----ceEEecchHHHHH-HHHhccC--------------CCCeEEEcCCCCccHHHHHhhhcccC
Q 022194 57 RDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLG--------------TGEEIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~----~~i~~~sG~~ai~-~~~~~~~--------------~g~~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
.+++.+++++++|.+ ..+++++||+|+. ++..+.. +++.|+++++.|.++.. .++..
T Consensus 137 e~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~----~~~~~ 212 (511)
T 3vp6_A 137 EQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKK----AGAAL 212 (511)
T ss_dssp HHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHH----HHHHT
T ss_pred HHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHH----HHHHc
Confidence 566777889999876 4667788887764 4444332 56789999999998874 44445
Q ss_pred Cc---EEEEecCC-----CHHHHHhhcCCC------ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc
Q 022194 118 GV---VVKRVNTC-----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL 183 (301)
Q Consensus 118 g~---~~~~~~~~-----d~~~l~~~l~~~------~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~ 183 (301)
|+ .++.++.+ |+++|++++.+. +++|++++++|++|.+.|+++|+++|++||+|+++|++|+.+..
T Consensus 213 g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~ 292 (511)
T 3vp6_A 213 GFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLL 292 (511)
T ss_dssp TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGG
T ss_pred CCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHh
Confidence 55 77777765 899999998744 88999999999999999999999999999999999999998765
Q ss_pred cCc-------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc---------------------CCCC
Q 022194 184 SRP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE---------------------GSGL 235 (301)
Q Consensus 184 ~~~-------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~---------------------~~~~ 235 (301)
..+ ...++|+++.++||++++|.+ .|+++.+++.+.+........+ +...
T Consensus 293 ~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~ 370 (511)
T 3vp6_A 293 MSRKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHV 370 (511)
T ss_dssp GCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCC
T ss_pred hChhhhhhccCCccCCEEEECcccccCCCcC--eEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCch
Confidence 322 112569999999999988765 4777777765544322110000 0011
Q ss_pred CHHhHHHHHcc--cccHHHHHHHHHHHHHHHHHHHHhCCCcceEe
Q 022194 236 APFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVN 278 (301)
Q Consensus 236 ~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~ 278 (301)
.....++++.. .+.+.+++++..++++++.+.|++.|+++.+.
T Consensus 371 ~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~ 415 (511)
T 3vp6_A 371 DIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF 415 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESS
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 23334444433 34567888999999999999999888765443
No 165
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.87 E-value=3.5e-22 Score=180.14 Aligned_cols=252 Identities=13% Similarity=0.034 Sum_probs=159.3
Q ss_pred ceeeecCCCCCC---CCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc--CC-CceEEecchHHHHH
Q 022194 11 TLLMNFSNEFDP---YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD--KA-DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~~---~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~--~~-~~~i~~~sG~~ai~ 84 (301)
..++||+ ++.+ +|. .+|.+......... ....+.+..+..+.+.++++++++++ +. +++++++||++|+.
T Consensus 43 ~~~lD~~-~~~~~~~lG~-~~p~v~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~ 118 (439)
T 3dxv_A 43 RELIDLS-GAWGAASLGY-GHPAIVAAVSAAAA--NPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANE 118 (439)
T ss_dssp CEEEESS-TTTTTCTTCB-SCHHHHHHHHHHHH--SCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHH
T ss_pred CEEEECC-CchhhccCCC-CCHHHHHHHHHHHH--hccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHH
Confidence 4689999 6776 887 45555544322211 11222222222345899999999998 55 57888888899986
Q ss_pred HHHhc---cCCCCeEEEcCCCCccHHHHHhhhcccCC-----------cEEEEecCC----------CHHHHHhhc----
Q 022194 85 AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTG-----------VVVKRVNTC----------DLDEVASAI---- 136 (301)
Q Consensus 85 ~~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g-----------~~~~~~~~~----------d~~~l~~~l---- 136 (301)
.++.+ ..++++|++.++.||+............. ..+..++.. |++++++++
T Consensus 119 ~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 198 (439)
T 3dxv_A 119 AAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVP 198 (439)
T ss_dssp HHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcC
Confidence 44433 34678899999999877533211111100 012233333 589999998
Q ss_pred CCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccc-cC---ccCCCCcEEEecccccccCCCCc
Q 022194 137 GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL-SR---PLELGADIVMHSATKFIAGHSDV 208 (301)
Q Consensus 137 ~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~~---~~~~~~di~~~S~sK~~~g~~g~ 208 (301)
.+++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+.... .. ....+....+.|+||+++ + |+
T Consensus 199 ~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~-~-G~ 276 (439)
T 3dxv_A 199 AGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLG-G-GL 276 (439)
T ss_dssp TTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGG-T-TS
T ss_pred CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhc-C-Cc
Confidence 567889999999999999987 99999999999999999999973211 11 112233233348999996 3 77
Q ss_pred eeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 209 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 209 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.|++++++ .+.+.+.......+. .++..++++..+++.+ .+..+++.++.+++++.|++
T Consensus 277 riG~~~~~~-~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~ 338 (439)
T 3dxv_A 277 PLSAVIAPA-EILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSE 338 (439)
T ss_dssp CCEEEEEEH-HHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECH-HHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 899999874 444433332233344 6777776666666543 23445666666666666654
No 166
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.87 E-value=2.7e-21 Score=172.96 Aligned_cols=213 Identities=15% Similarity=0.130 Sum_probs=149.8
Q ss_pred chHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc------CCCCeEE-EcCCCCccHHHHHhhhcccC--CcEEE
Q 022194 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL------GTGEEIV-AGDDLYGGTDRLLSRVTPKT--GVVVK 122 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~------~~g~~Vl-v~~~~y~~~~~~~~~~~~~~--g~~~~ 122 (301)
+..+++++++++++|.+ +++++++|++++. ++..++ ++||+|+ ++.+.|+++...+....+.. |.+++
T Consensus 71 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~ 150 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLR 150 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEE
Confidence 44789999999999975 4555566678885 555554 8898755 54556665554443333333 88899
Q ss_pred EecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEeccccc
Q 022194 123 RVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKF 201 (301)
Q Consensus 123 ~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK~ 201 (301)
.++. ++++++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.... ....+.|+++.|+||+
T Consensus 151 ~v~~--~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~ 228 (416)
T 1qz9_A 151 LVDS--PEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKY 228 (416)
T ss_dssp EESS--GGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSST
T ss_pred EeCc--HHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCccc
Confidence 9887 889999998899999999999999999999999999999999999999998765432 2234689999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhh-----------------------hhcCCCCCHHhHHHHHccc-----ccHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQ-----------------------NAEGSGLAPFDCWICLRGV-----KTMALR 253 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l-----~~~~~~ 253 (301)
++++.++ .|+++.+++. .+.+.... .....+.+.....++..++ ..+.+.
T Consensus 229 l~~g~~~-~g~l~~~~~~-~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 306 (416)
T 1qz9_A 229 LNGGPGS-QAFVWVSPQL-CDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASL 306 (416)
T ss_dssp TCCCTTC-CCEEEECTTT-TTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred CCCCCCC-eEEEEECHHH-HhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 8554442 2888887653 22222110 1111233444333332222 235667
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 022194 254 VEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~ 271 (301)
.++..++++++.+.|+++
T Consensus 307 ~~~~~~~~~~l~~~L~~~ 324 (416)
T 1qz9_A 307 RRKSLALTDLFIELVEQR 324 (416)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 788888888999998875
No 167
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.87 E-value=1e-20 Score=165.46 Aligned_cols=213 Identities=17% Similarity=0.137 Sum_probs=148.0
Q ss_pred chHHHHHHHHHhhcCCCc-eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhh--cccC--CcEEEEecCC-
Q 022194 55 PTRDALESLLAKLDKADR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRV--TPKT--GVVVKRVNTC- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~-~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~--~~~~--g~~~~~~~~~- 127 (301)
+.++++++++++++|.+. ++++++|++++. ++..++++||+|++++|.|..+. .. +... |.+++.++.+
T Consensus 43 ~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~----~~~~~~~~~~g~~~~~v~~~~ 118 (356)
T 1v72_A 43 ELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINND----ECGAPEFFSNGAKLMTVDGPA 118 (356)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHS----STTHHHHHTTSCEEEECCCGG
T ss_pred hHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhh----hchHHHHHhCCcEEEEecCCC
Confidence 458999999999998654 577788898885 66667889999999999887653 22 3344 7888888865
Q ss_pred ---CHHHHHh-hcCC-------CceEEEEeCCCCCcccc---ccHHHHHHHHHHcCCEEEEeCCcCCccc---c-CccC-
Q 022194 128 ---DLDEVAS-AIGP-------WTKLVWVESPTNPRQQI---CDIRKIAEMAHAHGALLLVDNSIMSPVL---S-RPLE- 188 (301)
Q Consensus 128 ---d~~~l~~-~l~~-------~~~~v~i~~~~np~G~~---~~l~~l~~l~~~~~~~li~D~~~~~~~~---~-~~~~- 188 (301)
|++++++ ++++ ++++|++++|+| ||.+ .++++|+++|++||+++|+|++|..+.. . .+..
T Consensus 119 ~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 197 (356)
T 1v72_A 119 AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM 197 (356)
T ss_dssp GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT
T ss_pred CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh
Confidence 7999999 8875 689999999886 9995 4589999999999999999999864211 1 1111
Q ss_pred ---CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCC--CHHhHHHHHccccc--HHHHHHHHHHHH
Q 022194 189 ---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKT--MALRVEKQQDNA 261 (301)
Q Consensus 189 ---~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~--~~~~~~~~~~~~ 261 (301)
.+.|+++.|+||+ ++|.| .|+++++ +.+.+.+.......+... ...........++. +.+..++..+++
T Consensus 198 ~~~~~~d~~~~s~sK~-g~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 273 (356)
T 1v72_A 198 TWKAGVDALSFGATKN-GVLAA--EAIVLFN-TSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAA 273 (356)
T ss_dssp TGGGTCCEEEECCGGG-TCSSC--EEEEESS-GGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred hhhhcCCEEEEecccC-CCcCc--cEEEEEC-HHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3678899999999 45422 2577765 455555444333223211 22222222333322 334566777888
Q ss_pred HHHHHHHHhCCCcce
Q 022194 262 QKIAEFLASHPRVKK 276 (301)
Q Consensus 262 ~~l~~~l~~~~~v~~ 276 (301)
+++.+.|++++++..
T Consensus 274 ~~l~~~L~~~~g~~~ 288 (356)
T 1v72_A 274 QRLAQGLEGLGGVEV 288 (356)
T ss_dssp HHHHHHHTTCTTEEE
T ss_pred HHHHHHHhhCCCcEE
Confidence 889999988777643
No 168
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.87 E-value=2.1e-21 Score=174.06 Aligned_cols=254 Identities=13% Similarity=0.046 Sum_probs=158.8
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC---ceEEecchHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD---RALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~---~~i~~~sG~~ai~~ 85 (301)
..++||.++. .++|...+|.+........+ ....+....+..+...++++.+++.++.+ ++++++||++|+..
T Consensus 42 ~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ 119 (419)
T 2eo5_A 42 NKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQ--KLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEA 119 (419)
T ss_dssp CEEEESSGGGGTTTTCBSCCHHHHHHHHHHHT--TSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred CEEEEccCChhhhccCCCCCHHHHHHHHHHHh--hCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHH
Confidence 3688997333 37887745555544322211 11111112233455889999999999853 56666777899864
Q ss_pred HHh-ccC-CCCeEEEcCCCCccHHHHHhhhc----------ccCCcEEEEecCC---------------------CHHHH
Q 022194 86 VTH-LLG-TGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNTC---------------------DLDEV 132 (301)
Q Consensus 86 ~~~-~~~-~g~~Vlv~~~~y~~~~~~~~~~~----------~~~g~~~~~~~~~---------------------d~~~l 132 (301)
++. +.. +||+|++++|.||+......... ......++.++.+ |++++
T Consensus 120 ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l 199 (419)
T 2eo5_A 120 SIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFI 199 (419)
T ss_dssp HHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHH
Confidence 443 322 38999999999987643322111 1112244555432 25788
Q ss_pred H-hhcC-----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccC---ccCCCCcEEEecc
Q 022194 133 A-SAIG-----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR---PLELGADIVMHSA 198 (301)
Q Consensus 133 ~-~~l~-----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~---~~~~~~di~~~S~ 198 (301)
+ ++++ +++++|+++..+|++|...+ +++|+++|++||+++|+||+|.. +..+. ....+....+.|+
T Consensus 200 ~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~ 279 (419)
T 2eo5_A 200 EDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITL 279 (419)
T ss_dssp HHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE
T ss_pred HHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEe
Confidence 8 8776 35566666555567897665 99999999999999999999973 22211 1111222224479
Q ss_pred cccccCCCC-ceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 199 TKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 199 sK~~~g~~g-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
||++++ | ++.|+++++++.. .+ ......+...++..+.++..+++.+.+..+++.++.+++.+.|++.
T Consensus 280 sK~~~~--G~~riG~~~~~~~~~--~~-~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 280 AKALGG--GIMPIGATIFRKDLD--FK-PGMHSNTFGGNALACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp CGGGGT--TTSCCEEEEEEGGGC--CC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cccccC--CccceEEEEEchHhh--cC-CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999963 7 7899999886543 33 2123334556777777777777766556777888888899988775
No 169
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.87 E-value=2.1e-21 Score=170.28 Aligned_cols=218 Identities=20% Similarity=0.135 Sum_probs=147.5
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCe-EEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEE-IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~-Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...+++++++++++.+..+++++|++|+. ++..++.+||+ |++..+.++.+...........|.+++.++.+
T Consensus 47 ~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 126 (359)
T 3pj0_A 47 GAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQLL 126 (359)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCTTSCC
T ss_pred CHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCcCCCc
Confidence 3558999999999999998888899998875 66667778876 44434433332210001113358888888764
Q ss_pred CHHHHHhhcCCCceEEEEeCCCCCc-ccccc---HHHHHHHHHHcCCEEEEeCCcCCccc---c---CccCCCCcEEEec
Q 022194 128 DLDEVASAIGPWTKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMSPVL---S---RPLELGADIVMHS 197 (301)
Q Consensus 128 d~~~l~~~l~~~~~~v~i~~~~np~-G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~---~---~~~~~~~di~~~S 197 (301)
|+++++++ .+++++|++++|+||+ |.+.+ +++|+++|++||+++|+|++|..+.. . .....+.|+++.|
T Consensus 127 d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s 205 (359)
T 3pj0_A 127 TIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVS 205 (359)
T ss_dssp CHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEE
T ss_pred CHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEe
Confidence 88999988 7789999999999998 68776 55559999999999999999764431 1 1112467899999
Q ss_pred ccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCC--CCHHhHHHHHcccccHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 198 ~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
+||+++++. +|+++.+ +.+.+.+.......+.. .....+.+....++...++.++..++++++.+.|++++++.
T Consensus 206 ~sK~~~~~~---gg~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 281 (359)
T 3pj0_A 206 FYKGIGGIA---GAILAGN-DDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSGVK 281 (359)
T ss_dssp SSSTTCCSS---CEEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTTEE
T ss_pred ccccCCCcc---eEEEECC-HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCCce
Confidence 999997653 3666655 55666665544333322 12222222223333333455667788889999999987764
Q ss_pred e
Q 022194 276 K 276 (301)
Q Consensus 276 ~ 276 (301)
.
T Consensus 282 ~ 282 (359)
T 3pj0_A 282 T 282 (359)
T ss_dssp E
T ss_pred e
Confidence 4
No 170
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.86 E-value=2.6e-21 Score=173.95 Aligned_cols=253 Identities=13% Similarity=0.088 Sum_probs=158.4
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
..++||.++. .++|.. +|.+........+ ....+.++.+..+...++++.+++.++ .+++++++||++|+.++
T Consensus 43 ~~ylD~~~~~~~~~lg~~-~p~v~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~a 119 (429)
T 1s0a_A 43 RRLVDGMSSWWAAIHGYN-HPQLNAAMKSQID--AMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA 119 (429)
T ss_dssp CEEEESSTTTTTCTTCBS-CHHHHHHHHHHHH--HCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred CEEEEcCccHhhccCCCC-CHHHHHHHHHHHH--hcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Confidence 3688987443 578864 4544433222111 001111112234557889999999984 45677778889998644
Q ss_pred Hh-c---cC----CCCeEEEcCCCCccHHHHHhhhcc------------cCCcEEEEecC---------CCHHHHHhhcC
Q 022194 87 TH-L---LG----TGEEIVAGDDLYGGTDRLLSRVTP------------KTGVVVKRVNT---------CDLDEVASAIG 137 (301)
Q Consensus 87 ~~-~---~~----~g~~Vlv~~~~y~~~~~~~~~~~~------------~~g~~~~~~~~---------~d~~~l~~~l~ 137 (301)
+. + .+ |||+|++.+|.||++......... ..++....++. .|+++++++++
T Consensus 120 i~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 199 (429)
T 1s0a_A 120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA 199 (429)
T ss_dssp HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHH
Confidence 33 2 22 689999999999986432211111 11345555442 36888988886
Q ss_pred ---CCceEEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccC---cc--CCCCcEEEeccccccc
Q 022194 138 ---PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR---PL--ELGADIVMHSATKFIA 203 (301)
Q Consensus 138 ---~~~~~v~i~~~-~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~---~~--~~~~di~~~S~sK~~~ 203 (301)
+++++|+++.+ +||+|.+.+ +++|+++|++||+++|+||+|+. +..+. .. ....|++ |+||+++
T Consensus 200 ~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~ 277 (429)
T 1s0a_A 200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALT 277 (429)
T ss_dssp HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG
T ss_pred hCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE--Eeccccc
Confidence 46677777766 799998776 99999999999999999999973 22111 11 2234544 7899996
Q ss_pred CCCC-ceeeEEEEcchhHHHHHHHhh-----hhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHhC
Q 022194 204 GHSD-VMAGVLAVKGERLAKELYFLQ-----NAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 204 g~~g-~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+ | ++.|++++++ .+.+.+.... ...+...++..+.++..+++.+ .+..++..++.+++.+.|++.
T Consensus 278 ~--G~~~iG~~~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 350 (429)
T 1s0a_A 278 G--GTMTLSATLTTR-EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPA 350 (429)
T ss_dssp T--SSSCCEEEEECH-HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGG
T ss_pred C--CCccceEEEeCH-HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 4 5 6789999875 4555444321 1123445666666666665543 234567777788888888764
No 171
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.86 E-value=1.9e-20 Score=177.07 Aligned_cols=214 Identities=14% Similarity=0.029 Sum_probs=155.1
Q ss_pred hHHHHHHHHHhhcCCCceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-------
Q 022194 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------- 126 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~------- 126 (301)
...++++.+++++|.+..+++++|+ +++. ++.+++++||+|+++.+.|.++... .+...|+++++++.
T Consensus 174 ~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~~~~~~i 250 (730)
T 1c4k_A 174 PAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTNRNPYGF 250 (730)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEEECTTCC
T ss_pred HHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCCccccCc
Confidence 4899999999999999888888886 7774 7778899999999999999888632 25667888887763
Q ss_pred ---CCHHHH-----HhhcCCC------c----eEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc----
Q 022194 127 ---CDLDEV-----ASAIGPW------T----KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (301)
Q Consensus 127 ---~d~~~l-----~~~l~~~------~----~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~---- 184 (301)
.|++++ +++++++ + ++|++++| |++|.+.|+++|+++|+++|+++++|++|+.+...
T Consensus 251 ~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~ 329 (730)
T 1c4k_A 251 IGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMM 329 (730)
T ss_dssp EEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGG
T ss_pred cCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCccc
Confidence 167777 8888765 4 89999998 58999999999999999999999999999753211
Q ss_pred ---CccC---CCCc----EEEecccccccCCCCceeeEEEEcchhH--------HHHHHHhhhhc-CCCCCHHhHHHHHc
Q 022194 185 ---RPLE---LGAD----IVMHSATKFIAGHSDVMAGVLAVKGERL--------AKELYFLQNAE-GSGLAPFDCWICLR 245 (301)
Q Consensus 185 ---~~~~---~~~d----i~~~S~sK~~~g~~g~~~g~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~ 245 (301)
.+.. .++| +++.|+||+++|+.+ +|+++.+++.+ ...+....... ..+.+....+.+..
T Consensus 330 ~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~--gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~a 407 (730)
T 1c4k_A 330 RNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQ--TSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDV 407 (730)
T ss_dssp GGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTT--CEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHH
T ss_pred CCcCcccccccCCCCCCEEEEECCCCCCCCCCC--EEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHH
Confidence 1222 2677 999999999977653 57776665443 12222222222 23334333333222
Q ss_pred ccc-----cHHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 022194 246 GVK-----TMALRVEKQQDNAQKIAEFLAS-HPRVK 275 (301)
Q Consensus 246 ~l~-----~~~~~~~~~~~~~~~l~~~l~~-~~~v~ 275 (301)
+++ .-.+++++..++++++++.|++ .+++.
T Consensus 408 A~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~ 443 (730)
T 1c4k_A 408 NAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFR 443 (730)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeE
Confidence 222 2355678888999999999988 67664
No 172
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.86 E-value=1.1e-20 Score=167.24 Aligned_cols=210 Identities=16% Similarity=0.189 Sum_probs=152.2
Q ss_pred hHHHHHHHHHhhcCCCceEEe-cchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEec-------
Q 022194 56 TRDALESLLAKLDKADRALCF-TSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVN------- 125 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~~i~~-~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~------- 125 (301)
.++++++.++++++.++.+++ +|||+|+.+++.++++||+|++.++.|++.. +...++..| .+++.++
T Consensus 36 ~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g~~ 113 (379)
T 3ke3_A 36 VMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTEDT 113 (379)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESSCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEeccccccc
Confidence 377888999999998765655 5778998766677889999999999998753 223333333 3555443
Q ss_pred -------CCCHHHHHhhcC-CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcE
Q 022194 126 -------TCDLDEVASAIG-PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADI 193 (301)
Q Consensus 126 -------~~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di 193 (301)
..|+++++++++ .++++|++++++|++|.+.| +++|+++|+++|+++|+|++++ +... .....++|+
T Consensus 114 ~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~~~d~ 192 (379)
T 3ke3_A 114 EAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKELGIDV 192 (379)
T ss_dssp SSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHHTCSE
T ss_pred cccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccccccCCCE
Confidence 248899999885 47899999999999999999 9999999999999999999998 6432 333458999
Q ss_pred EEecccccccCCCCceeeEEEEcchhHHHHHHHhh-------------------hh---cCCCCCHHhHHHHHccccc--
Q 022194 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------------------NA---EGSGLAPFDCWICLRGVKT-- 249 (301)
Q Consensus 194 ~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~-------------------~~---~~~~~~~~~~~~~~~~l~~-- 249 (301)
++.|+||++++|+| .|+++.+++ +.+.+.... .. +..+.+....+++..+++.
T Consensus 193 ~~~s~~K~l~~~~g--~g~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~ 269 (379)
T 3ke3_A 193 LISAPQKGWSSTPC--AGLVMLSAA-AIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAK 269 (379)
T ss_dssp EEECTTTTTCSCCC--EEEEEECHH-HHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred EEecchhhcCCCCc--eEEEEECHH-HHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999988776 588888754 333332100 00 1124455555554444443
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhC
Q 022194 250 ---MALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 250 ---~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+..++..++++++++.|+++
T Consensus 270 ~~g~~~~~~~~~~l~~~l~~~l~~~ 294 (379)
T 3ke3_A 270 EIGFDILRDAQWELGNRVRKVLTDK 294 (379)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHc
Confidence 3456677778888888888875
No 173
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.86 E-value=5.2e-21 Score=167.46 Aligned_cols=247 Identities=15% Similarity=0.078 Sum_probs=162.2
Q ss_pred eeeecCCCCCCCCccccCeeecceeecCCCCCCCCccccCCCC-chHHHHHHHHHhhcCCC--ceEEecchHHHHH-HHH
Q 022194 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGN-PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVT 87 (301)
Q Consensus 12 ~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~-~~~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~ 87 (301)
.+++|+ . ++.|. .+|.+......... .|.... |. +.++++++++++++|.+ ++++++||++++. ++.
T Consensus 14 ~~i~l~-~-~~~~~-~~~~v~~a~~~~~~-----~~~~~~-g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~ 84 (359)
T 1svv_A 14 KPYSFV-N-DYSVG-MHPKILDLMARDNM-----TQHAGY-GQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACS 84 (359)
T ss_dssp -CEECS-C-SCSSC-CCHHHHHHHHHHTT-----CCCCST-TCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHH
T ss_pred eeEEec-C-CCcCC-CCHHHHHHHHHHHh-----hccccc-cccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHH
Confidence 467887 3 66663 34444433222111 122222 44 44999999999999865 4566677789986 666
Q ss_pred hccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhcCCC-------ceEEEEeCCCCCccccc
Q 022194 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPW-------TKLVWVESPTNPRQQIC 156 (301)
Q Consensus 88 ~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~~~-------~~~v~i~~~~np~G~~~ 156 (301)
.++++||+|++++|.|+++... ..++..|.+++.++.+ |++++++.++++ +++|++++| ||||.+.
T Consensus 85 ~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~ 161 (359)
T 1svv_A 85 LALRPWEAVIATQLGHISTHET--GAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY 161 (359)
T ss_dssp HHCCTTEEEEEETTSHHHHSST--THHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC
T ss_pred HHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec
Confidence 6788999999999999988521 0355678888888865 589999988754 899999998 7899998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCCc---CCccccCccC-----CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHH
Q 022194 157 D---IRKIAEMAHAHGALLLVDNSI---MSPVLSRPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (301)
Q Consensus 157 ~---l~~l~~l~~~~~~~li~D~~~---~~~~~~~~~~-----~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~ 225 (301)
+ +++|+++|+++|+++|+||+| ..+....... ...|+++.|++|+ +++.+ .|+++.+++ +.+.+.
T Consensus 162 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~--~g~l~~~~~-~~~~~~ 237 (359)
T 1svv_A 162 TKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFG--EALIILNDA-LKPNAR 237 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSC--EEEEECSGG-GCTTHH
T ss_pred CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCc--eEEEEEccc-HHHHHH
Confidence 7 899999999999999999998 3233221111 3578999999997 45543 488887654 333333
Q ss_pred HhhhhcCC--CCCHHhHHHHHcccc--cHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 226 FLQNAEGS--GLAPFDCWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 226 ~~~~~~~~--~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
......+. ..+......+...++ .+.+.++++.++++++.+.| +.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~ 290 (359)
T 1svv_A 238 HLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIR 290 (359)
T ss_dssp HHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCC
T ss_pred HHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeE
Confidence 32211222 112122122222222 34566778888888899988 455553
No 174
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.86 E-value=8.4e-21 Score=170.65 Aligned_cols=212 Identities=17% Similarity=0.122 Sum_probs=139.7
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHHH-HHhcc--------CCCCeEEEcCCCCccH-------------HHHHhh
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLL--------GTGEEIVAGDDLYGGT-------------DRLLSR 112 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~~-~~~~~--------~~g~~Vlv~~~~y~~~-------------~~~~~~ 112 (301)
.+++++++++++|.+ +++++++|++++.+ +..++ ++||+|++..|.|+.+ ...+..
T Consensus 63 ~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~ 142 (432)
T 3a9z_A 63 INTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEH 142 (432)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHH
Confidence 579999999999875 45555555798864 44443 4898888888888654 222334
Q ss_pred hcccCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC----------CEEEEeC
Q 022194 113 VTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG----------ALLLVDN 176 (301)
Q Consensus 113 ~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~----------~~li~D~ 176 (301)
..+..|.+++.++.+ |++++++++++++++|++++|+||||.+.|+++|.++|+++| +++|+|+
T Consensus 143 ~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDe 222 (432)
T 3a9z_A 143 LVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDA 222 (432)
T ss_dssp HHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEEC
T ss_pred HHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEc
Confidence 455678888888863 789999999988999999999999999999999999999999 9999999
Q ss_pred CcCCcccc-CccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh-------hhhcCCCCCHHhHHHHHcccc
Q 022194 177 SIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVK 248 (301)
Q Consensus 177 ~~~~~~~~-~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~ 248 (301)
+|+.+... .....+.|+++.|+||++ |+ +.|+++++++.....+... ......+.+....+++..+++
T Consensus 223 a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~ 298 (432)
T 3a9z_A 223 AQALGKRRVDVEDLGVDFLTIVGHKFY-GP---RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAD 298 (432)
T ss_dssp TTTTTTSCCCHHHHCCSEEEEEGGGTT-CC---SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHH
T ss_pred hhhhCCcccChhhcCCCEEEEehhHhc-CC---cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHH
Confidence 99876543 222346899999999987 54 3799998865411111110 111223344444444433433
Q ss_pred c----HHHHHHHHHHHHHHHHHHHHhCC
Q 022194 249 T----MALRVEKQQDNAQKIAEFLASHP 272 (301)
Q Consensus 249 ~----~~~~~~~~~~~~~~l~~~l~~~~ 272 (301)
. +.+..++..++++++.+.|++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 326 (432)
T 3a9z_A 299 LVSENCETYEAHMRDIRDYLEERLEAEF 326 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3 34555667777788888887643
No 175
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.86 E-value=5.2e-21 Score=173.16 Aligned_cols=252 Identities=15% Similarity=0.101 Sum_probs=159.1
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEecchHHHHHH-H
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGMAALAA-V 86 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~~-~~i~~~sG~~ai~~-~ 86 (301)
.+++||.++ +.++|..+ |.+......+.+ ...+....+..+.+.++++++++.++.+ ++++++||++|+.. +
T Consensus 49 ~~~lD~~~~~~~~~lG~~~-p~v~~A~~~~~~---~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al 124 (452)
T 3n5m_A 49 KRYLDGMSGLWCVNSGYGR-KELAEAAYKQLQ---TLSYFPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAF 124 (452)
T ss_dssp CEEEETTHHHHTCTTCBCC-HHHHHHHHHHHT---TCCCCCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHH
T ss_pred CEEEECCcchhhccCCCCC-HHHHHHHHHHHH---hcCCcccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHH
Confidence 468999843 38899864 444433222211 1111111112345899999999998654 46677888999864 4
Q ss_pred Hhcc-----C---CCCeEEEcCCCCccHHHHHhhhc---------ccCCcEEEEecC--------CC---------HHHH
Q 022194 87 THLL-----G---TGEEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNT--------CD---------LDEV 132 (301)
Q Consensus 87 ~~~~-----~---~g~~Vlv~~~~y~~~~~~~~~~~---------~~~g~~~~~~~~--------~d---------~~~l 132 (301)
..+. + ++++|++.++.||++........ ......+..++. .| ++++
T Consensus 125 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (452)
T 3n5m_A 125 KIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEV 204 (452)
T ss_dssp HHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHH
Confidence 4433 4 78999999999998753321111 111112333332 23 8899
Q ss_pred HhhcC----CCceEEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEeccc
Q 022194 133 ASAIG----PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSAT 199 (301)
Q Consensus 133 ~~~l~----~~~~~v~i~~~-~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~S~s 199 (301)
+++++ +++++|+++.+ +| +|.+.+ +++|+++|++||+++|+||+|... ..+ .....+....+.++|
T Consensus 205 e~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~s 283 (452)
T 3n5m_A 205 DRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMA 283 (452)
T ss_dssp HHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC
T ss_pred HHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeec
Confidence 98886 56788888888 89 998875 999999999999999999998732 211 122234444455689
Q ss_pred ccccCCCC-ceeeEEEEcchhHHHHHHH------hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 200 KFIAGHSD-VMAGVLAVKGERLAKELYF------LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 200 K~~~g~~g-~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
|++++ | ++.|++++++ .+.+.+.. .....+...++..+++++.+++.+. +..++..++.+++++.|++
T Consensus 284 K~l~~--G~~~ig~~~~~~-~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 360 (452)
T 3n5m_A 284 KGITS--AYLPLSATAVKR-EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKE 360 (452)
T ss_dssp GGGGT--TSSCCEEEEEEH-HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccC--CCcceEEEEECH-HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 99954 6 7889998874 45453321 1122345567777777777766542 3345666666666666654
No 176
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.85 E-value=9.8e-21 Score=171.36 Aligned_cols=214 Identities=12% Similarity=-0.024 Sum_probs=153.2
Q ss_pred HHHHHHHHHhhcCCCc-------eEEecchHHHHH-HHHhccC--------CC-----CeEEEcCCCCccHHHHHhhhcc
Q 022194 57 RDALESLLAKLDKADR-------ALCFTSGMAALA-AVTHLLG--------TG-----EEIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~-------~i~~~sG~~ai~-~~~~~~~--------~g-----~~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
.+++++++++++|.+. .+++++|++|+. ++.++.. +| ++|++++ .|..+. ..+.
T Consensus 83 ~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~----~~~~ 157 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWH----KFAR 157 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHH----HHHH
T ss_pred HHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHH----HHHH
Confidence 6778888999998762 567777788875 4444432 44 5899998 777665 5566
Q ss_pred cCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc------CCEEEEeCCcCCccc
Q 022194 116 KTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH------GALLLVDNSIMSPVL 183 (301)
Q Consensus 116 ~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~------~~~li~D~~~~~~~~ 183 (301)
..|++++.++.+ |++++++++++++++|++++|+||||.+.|+++|+++|+++ |+++++|++|+.+..
T Consensus 158 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~ 237 (452)
T 2dgk_A 158 YWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLA 237 (452)
T ss_dssp HTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTH
T ss_pred HcCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHH
Confidence 778999999864 79999999998999999999999999999999999999995 999999999987643
Q ss_pred ---cC-----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHH-HHHHHhhhhcC---------CCC---CHHhHHH
Q 022194 184 ---SR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAEG---------SGL---APFDCWI 242 (301)
Q Consensus 184 ---~~-----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~-~~~~~~~~~~~---------~~~---~~~~~~~ 242 (301)
.. ....++|+++.|+||++.+|.+ .|+++++++.+. +.+.......+ .+. .....++
T Consensus 238 ~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~a 315 (452)
T 2dgk_A 238 PFVAPDIVWDFRLPRVKSISASGHKFGLAPLG--CGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYY 315 (452)
T ss_dssp HHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHH
T ss_pred HhhCccchhhcCCCCCcEEEECcccccCCCCC--eEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHH
Confidence 11 1123689999999998766554 699988765432 22111011100 011 1223334
Q ss_pred HHccc--ccHHHHHHHHHHHHHHHHHHHHhCCCcceE
Q 022194 243 CLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (301)
Q Consensus 243 ~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v 277 (301)
++..+ +.+.++.++..++++++.+.|++++++..+
T Consensus 316 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 352 (452)
T 2dgk_A 316 EFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI 352 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 33332 335677788899999999999988766443
No 177
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.85 E-value=2e-21 Score=175.88 Aligned_cols=249 Identities=16% Similarity=0.142 Sum_probs=151.2
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
..++||+++. +++|. ++|.+........+ ....+. +..+.++++.+++++.+ +.+++++++||++|+.+++
T Consensus 57 ~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~--~~~~~~---~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al 130 (453)
T 2cy8_A 57 NVYLDFFGGHGALVLGH-GHPRVNAAIAEALS--HGVQYA---ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLAL 130 (453)
T ss_dssp CEEEESCTTTTSCTTCB-TCHHHHHHHHHHHT--TTCSSC---SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred CEEEECcccHhhcccCC-CCHHHHHHHHHHHH--hCCCCC---CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHH
Confidence 3688997332 77888 55555444322211 111111 22345889999999888 5667788888999986444
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHhhhc-------ccCCc------EEEEecCCCHHHHHhhcC---CCceEEEEeCC
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLSRVT-------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWVESP 148 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~~~~-------~~~g~------~~~~~~~~d~~~l~~~l~---~~~~~v~i~~~ 148 (301)
.+ +.++++|++.+|.||++........ ...|+ .+..++..|+++++++++ +++++|+++..
T Consensus 131 ~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~ 210 (453)
T 2cy8_A 131 RVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPV 210 (453)
T ss_dssp HHHHHHHCCCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSS
T ss_pred HHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCC
Confidence 43 4455789999999997653221101 01233 345566678999999887 46778877777
Q ss_pred CCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccccCc-----cCCCCcEEEecccccccCCCCceeeEEEEcchh
Q 022194 149 TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (301)
Q Consensus 149 ~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~~~-----~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~ 219 (301)
+|++|.+.+ +++|.++|++||+++|+||+|+....... .....|+ .|+||++++ |+++|++++++ .
T Consensus 211 ~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di--~s~sK~l~~--G~~~G~v~~~~-~ 285 (453)
T 2cy8_A 211 GSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNHGMQALLDVQPDL--TCLAKASAG--GLPGGILGGRE-D 285 (453)
T ss_dssp EHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTTHHHHHHTCCCSE--EEEEGGGGT--TSSCEEEEECH-H
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCchhhhHHhCCCCcE--EEEChhhhC--CcceEEEechH-H
Confidence 778998877 99999999999999999999983211111 1122454 489999963 57889999875 4
Q ss_pred HHHHHHH-----hhhhcCCCCCHHhHHHHHccccc-H-HHHHHHHHHHHHHHHHHHHh
Q 022194 220 LAKELYF-----LQNAEGSGLAPFDCWICLRGVKT-M-ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 220 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.+.+.. .....+...++..++++...++. + ++..+++.++.+++.+.|++
T Consensus 286 ~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (453)
T 2cy8_A 286 VMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNH 343 (453)
T ss_dssp HHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 4443322 11222345667777776666655 3 34556667777777777765
No 178
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.85 E-value=3.5e-21 Score=173.20 Aligned_cols=252 Identities=10% Similarity=0.006 Sum_probs=150.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCC-C-CchHHHHHHHHHhhcCC--CceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLDKA--DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~ 84 (301)
..++||+++ ++++|.. +|.+........+ . .. .|... + .+.+.++++++++.++. +++++++||++|+.
T Consensus 29 ~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~--~-~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~ 103 (430)
T 3i4j_A 29 RRYLDGSSGALVANIGHG-RAEVGERMAAQAA--R-LP-FVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATE 103 (430)
T ss_dssp CEEEETTHHHHTCTTCBC-CHHHHHHHHHHHH--H-CC-CCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHH
T ss_pred CEEEECCCchhccccCCC-CHHHHHHHHHHHH--h-cc-cccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHH
Confidence 468999854 6889976 4444433222111 1 11 12221 2 24589999999999854 56777788899986
Q ss_pred -HHHhcc--------CCCCeEEEcCCCCccHHHHHhhhcccCC---------c--EEEEecCC--------CHHHHHhhc
Q 022194 85 -AVTHLL--------GTGEEIVAGDDLYGGTDRLLSRVTPKTG---------V--VVKRVNTC--------DLDEVASAI 136 (301)
Q Consensus 85 -~~~~~~--------~~g~~Vlv~~~~y~~~~~~~~~~~~~~g---------~--~~~~~~~~--------d~~~l~~~l 136 (301)
++..+. .++++|++.+|.||++............ . .+..++.. |++++++++
T Consensus 104 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l 183 (430)
T 3i4j_A 104 SAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALL 183 (430)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHH
Confidence 444443 4578999999999987532211111000 0 22233332 347888887
Q ss_pred C----CCceEEEEeCCCC-Ccccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCC-CCcEEEecccccc
Q 022194 137 G----PWTKLVWVESPTN-PRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLEL-GADIVMHSATKFI 202 (301)
Q Consensus 137 ~----~~~~~v~i~~~~n-p~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~-~~di~~~S~sK~~ 202 (301)
+ +++++|+++.+++ ++|...+ +++|+++|++||+++|+||+|... ... ..... +....+.++||++
T Consensus 184 ~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l 263 (430)
T 3i4j_A 184 EREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGL 263 (430)
T ss_dssp HHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGG
T ss_pred HhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccc
Confidence 6 4566777777777 8888766 999999999999999999998732 211 11222 3333344689999
Q ss_pred cCCCC-ceeeEEEEcchhHHHHHHHh----hhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 203 AGHSD-VMAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 203 ~g~~g-~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
++ | ++.|++++++ .+.+.+... ....++..++..+.+++.+++.+ ++..++..++.+++++.|++
T Consensus 264 ~~--G~~r~G~~~~~~-~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~ 335 (430)
T 3i4j_A 264 AA--GYAPLAGLLAAP-QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQA 335 (430)
T ss_dssp TT--TSSCCEEEEECH-HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred cC--CccccEEEEECH-HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 53 7 8899999864 565655442 33344566777777776666543 22345555555555555543
No 179
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.85 E-value=3.3e-21 Score=175.47 Aligned_cols=209 Identities=18% Similarity=0.204 Sum_probs=152.6
Q ss_pred HHHHHHHHHhhcCCCceEEe-cchHHHHHH-HHhc----cCCCC-----eEEEcCCCCccHHHHHhhhcccCCcEEEEec
Q 022194 57 RDALESLLAKLDKADRALCF-TSGMAALAA-VTHL----LGTGE-----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~-~sG~~ai~~-~~~~----~~~g~-----~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~ 125 (301)
++++++++++++|.+..+++ ++|++++.+ ++.+ .++|| +|+++++.|+.+. ..+...|.+++.++
T Consensus 109 ~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~----~~~~~~G~~vv~v~ 184 (474)
T 1wyu_B 109 MWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNP----ATASMAGYQVREIP 184 (474)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHH----HHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhH----HHHHHCCCEEEEec
Confidence 78899999999999866545 666787753 3332 35777 9999999998886 44567788999998
Q ss_pred CC-----CHHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCcccc--CccCCCCcEEEec
Q 022194 126 TC-----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS--RPLELGADIVMHS 197 (301)
Q Consensus 126 ~~-----d~~~l~~~l~~~~~~v~i~~~~np~G~~-~~l~~l~~l~~~~~~~li~D~~~~~~~~~--~~~~~~~di~~~S 197 (301)
.+ |++++++++++++++|++++| |++|.+ .++++|+++|+++|+++|+|++|+.+... .+...++|+++.|
T Consensus 185 ~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s 263 (474)
T 1wyu_B 185 SGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLN 263 (474)
T ss_dssp BCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECC
T ss_pred CCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEe
Confidence 75 899999999989999999997 689998 69999999999999999999999765532 3334579999999
Q ss_pred ccccccCCC---CceeeEEEEcchhHHHHHHH-hh------------------hhcCCCCCHHhHHHHHccc-----ccH
Q 022194 198 ATKFIAGHS---DVMAGVLAVKGERLAKELYF-LQ------------------NAEGSGLAPFDCWICLRGV-----KTM 250 (301)
Q Consensus 198 ~sK~~~g~~---g~~~g~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~l-----~~~ 250 (301)
+||+|++|. |++.|+++++++. .+.+.. .. .....+.+...+.++...+ +.+
T Consensus 264 ~~K~~~~p~g~gG~~~G~~~~~~~l-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l 342 (474)
T 1wyu_B 264 LHKTFTVPHGGGGPGSGPVGVKAHL-APYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGL 342 (474)
T ss_dssp TTTTTCCCCTTSCCCCCCEEECGGG-GGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccCCCCCCCCeEEEEEcHHH-HHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHH
Confidence 999997653 3578999998653 332220 00 0011122333333333333 234
Q ss_pred HHHHHHHHHHHHHHHHHHHhC
Q 022194 251 ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+..++..++++++.+.|++.
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~~ 363 (474)
T 1wyu_B 343 KKAAALAVLNARYLKELLKEK 363 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 555777888889999999875
No 180
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.85 E-value=8.4e-21 Score=171.94 Aligned_cols=208 Identities=13% Similarity=0.124 Sum_probs=148.3
Q ss_pred HHHHHHHHHhhcCCCc-eEEecchH-HHHH-HHHhccC--CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC---C-
Q 022194 57 RDALESLLAKLDKADR-ALCFTSGM-AALA-AVTHLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~-~i~~~sG~-~ai~-~~~~~~~--~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~---~- 127 (301)
.+++++++++++|.+. ++++++|| .++. ++..+.. +++.|+++++.|+++. ..++..|++++.++. +
T Consensus 135 ~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~----~~~~~~G~~~~~v~~~~~~~ 210 (456)
T 2z67_A 135 TNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPI----KAVSFVGMNMRLVETVLDGD 210 (456)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH----HHHHHTTCEEEEECCEEETT
T ss_pred HHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHH----HHHHHcCCCceEEEEeccCC
Confidence 5778999999999874 45556667 4443 4443322 6778999999998875 445567888888775 2
Q ss_pred ----CHHHHHhhc-C----CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-Cc-----cCCCCc
Q 022194 128 ----DLDEVASAI-G----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RP-----LELGAD 192 (301)
Q Consensus 128 ----d~~~l~~~l-~----~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~-----~~~~~d 192 (301)
|++++++++ + .++.+|+++.++|++|.+.|+++|+++|+++|+++++|++|+....+ .+ ...++|
T Consensus 211 ~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D 290 (456)
T 2z67_A 211 RVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVD 290 (456)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCS
T ss_pred CCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCC
Confidence 799999998 4 46778888999999999999999999999999999999998855431 11 111789
Q ss_pred EEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCC--CHHhHHHHHccc--ccHHHHHHHHHHHHHHHHHHH
Q 022194 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGV--KTMALRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 193 i~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l 268 (301)
+++.|+||++++|.| +|+++++++.+.+.+.. ...+... +....++++..+ +.+.+..++..++++++.+.|
T Consensus 291 ~~~~s~hK~~~~p~g--~G~l~~~~~~~~~~l~~--~~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L 366 (456)
T 2z67_A 291 AVVSSSDKNLLTPIG--GGLVYSTDAEFIKEISL--SYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELL 366 (456)
T ss_dssp EEEEEHHHHHCCCSS--CEEEEESCHHHHHHHHT--TSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCcCCCCC--eEEEEEcCHHHHhhcCc--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998877654 69999976666554422 1222211 122233333322 335667788888899999999
Q ss_pred HhCC
Q 022194 269 ASHP 272 (301)
Q Consensus 269 ~~~~ 272 (301)
++++
T Consensus 367 ~~~~ 370 (456)
T 2z67_A 367 NDLS 370 (456)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 8874
No 181
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.85 E-value=1.7e-20 Score=172.44 Aligned_cols=214 Identities=18% Similarity=0.176 Sum_probs=151.6
Q ss_pred HHHHHHHHHhhcCCC--ceEEecchHHHHH-HHHhcc-------C-CCC------eEEEcCCCCccHHHHHhhhcccCCc
Q 022194 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL-------G-TGE------EIVAGDDLYGGTDRLLSRVTPKTGV 119 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~~i~~~sG~~ai~-~~~~~~-------~-~g~------~Vlv~~~~y~~~~~~~~~~~~~~g~ 119 (301)
.+++++++++++|.+ +.+++++||+|+. ++..+. + +|+ +|+++++.|+++...+ ...|.
T Consensus 150 e~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~----~~~g~ 225 (515)
T 2jis_A 150 EEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGA----AFLGL 225 (515)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHH----HHTTS
T ss_pred HHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHH----HHcCC
Confidence 567888999999986 5677788888875 333331 2 465 8899999999887544 33344
Q ss_pred ---EEEEecCC-----CHHHHHhhcCC------CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC
Q 022194 120 ---VVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR 185 (301)
Q Consensus 120 ---~~~~~~~~-----d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~ 185 (301)
+++.++.+ |++++++++.+ ++++|++++++|++|.+.|+++|+++|+++|+|+++|++|+.+....
T Consensus 226 g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~ 305 (515)
T 2jis_A 226 GTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLS 305 (515)
T ss_dssp CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGC
T ss_pred CCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhC
Confidence 77777764 78999998864 48999999999999999999999999999999999999999876643
Q ss_pred c-----c-C-CCCcEEEecccccccCCCCceeeEEEEcch-hHHHHHH-----Hhhhh----------cCC------CCC
Q 022194 186 P-----L-E-LGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELY-----FLQNA----------EGS------GLA 236 (301)
Q Consensus 186 ~-----~-~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~-~~~~~~~-----~~~~~----------~~~------~~~ 236 (301)
+ . . .++|+++.|+||++++|.| .|+++++++ .+.+... ..... ... ...
T Consensus 306 ~~~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~ 383 (515)
T 2jis_A 306 QTHRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVD 383 (515)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCC
T ss_pred hhhHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCccc
Confidence 2 1 1 2689999999999977765 588888876 3433211 11000 000 011
Q ss_pred HHhHHHHHccc--ccHHHHHHHHHHHHHHHHHHHHhCCCcce
Q 022194 237 PFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 237 ~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~ 276 (301)
....+++++.+ +.+.+..++..++++++.+.|++.+++..
T Consensus 384 al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 425 (515)
T 2jis_A 384 CLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFEL 425 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 23334433333 33566778888999999999998876543
No 182
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.85 E-value=3.9e-20 Score=165.72 Aligned_cols=209 Identities=19% Similarity=0.180 Sum_probs=137.1
Q ss_pred HHHH-HHHHHhhcCCCceE-EecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhh-hcccCCcEEEEecCC-----
Q 022194 57 RDAL-ESLLAKLDKADRAL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNTC----- 127 (301)
Q Consensus 57 ~~~l-~~~l~~~~~~~~~i-~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~-~~~~~g~~~~~~~~~----- 127 (301)
.+++ ++.+++.++.+... ++++|++|+. ++..++++||+|++++|.|++....... .....++....++.+
T Consensus 79 ~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (425)
T 3ecd_A 79 VEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTML 158 (425)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSS
T ss_pred HHHHHHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCc
Confidence 4444 47788999988764 4888998885 6667899999999999999873211111 122233455566543
Q ss_pred -CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-----CccCCCCcEEEecccc
Q 022194 128 -DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATK 200 (301)
Q Consensus 128 -d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~di~~~S~sK 200 (301)
|++++++++. .++++|++++|+|| ...++++|+++|++||+++|+||+|..+... .... ..|+++.|+||
T Consensus 159 ~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~sK 235 (425)
T 3ecd_A 159 IDYDQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTHK 235 (425)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSG
T ss_pred cCHHHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCCc
Confidence 8999999986 58899999988884 6788999999999999999999997654332 1222 37899999999
Q ss_pred cccCCCCceeeEEEEcchhHHHHHHHhhhhcC-CCCCHHhHHHH----Hccc-ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWIC----LRGV-KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~l-~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+++|+ ++|+++++++.+.+.+........ .+.......++ .... +.+.+..++..++.+++.+.|++.
T Consensus 236 ~l~g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 236 TLRGP---RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp GGCCC---SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCC---CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 99654 579999887666665544332221 12222222211 1112 334567788888888999999873
No 183
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.85 E-value=2e-21 Score=176.06 Aligned_cols=255 Identities=12% Similarity=0.082 Sum_probs=162.7
Q ss_pred eeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH-
Q 022194 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV- 86 (301)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~- 86 (301)
++|||.++ +.++|. ++|.+..+...+.+ ....+.+..+..+...+++++++++++ .+++++++||++|+.++
T Consensus 76 ~ylD~~s~~~~~~lGh-~~p~v~~A~~~~~~--~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Al 152 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGH-GHPALDQALTTQLR--VMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAA 152 (457)
T ss_dssp EEEETTHHHHTCTTCB-TCHHHHHHHHHHHH--HCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHH
T ss_pred EEEECCCcHhhhccCC-CCHHHHHHHHHHHH--hccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHH
Confidence 79999854 578998 45555443322211 111111122234568899999999995 45788888899998644
Q ss_pred HhccC-------CC-CeEEEcCCCCccHHHHHhhhcc------------cCCcEEEEecC-----CCHHHHHhhcC---C
Q 022194 87 THLLG-------TG-EEIVAGDDLYGGTDRLLSRVTP------------KTGVVVKRVNT-----CDLDEVASAIG---P 138 (301)
Q Consensus 87 ~~~~~-------~g-~~Vlv~~~~y~~~~~~~~~~~~------------~~g~~~~~~~~-----~d~~~l~~~l~---~ 138 (301)
..+.. +| ++|++.++.||+.......... ..+......+. .|+++++++++ +
T Consensus 153 k~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~ 232 (457)
T 3tfu_A 153 KMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG 232 (457)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC
Confidence 33332 44 5899999999886533212111 11223333322 26788988887 6
Q ss_pred CceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcc-ccC---ccCCCCcEEEecccccccCCCCce
Q 022194 139 WTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPV-LSR---PLELGADIVMHSATKFIAGHSDVM 209 (301)
Q Consensus 139 ~~~~v~i~~-~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~-~~~---~~~~~~di~~~S~sK~~~g~~g~~ 209 (301)
++++|+++. ++|++|.+.+ +++|.++|++||+++|+||+|.... ... ....+....+.|++|.++| +.++
T Consensus 233 ~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~g-G~~~ 311 (457)
T 3tfu_A 233 ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTG-GYLS 311 (457)
T ss_dssp GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGT-TSSC
T ss_pred CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhC-CCcc
Confidence 788999998 8999998875 9999999999999999999987322 111 1122333333489999965 2257
Q ss_pred eeEEEEcchhHHHHHHHh-----hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 210 AGVLAVKGERLAKELYFL-----QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 210 ~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
.|++++++ .+.+.+... ....+.+.++..+++++..++.+. +..++..++.+++++.|+++
T Consensus 312 lG~v~~~~-~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l 379 (457)
T 3tfu_A 312 LAATLCTA-DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTA 379 (457)
T ss_dssp CEEEEEEH-HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGG
T ss_pred eEEEEEcH-HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 89998875 455544311 223445667777777777766542 34566677777788887753
No 184
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.85 E-value=4e-21 Score=172.65 Aligned_cols=251 Identities=14% Similarity=0.135 Sum_probs=158.7
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-CCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-ADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~-~~~~i~~~sG~~ai~~~~ 87 (301)
..++||.++. ..+|.. +|.+......+.+ ....+.| ..+.+.++++++++.++ .+++++++||++|+.+++
T Consensus 52 ~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~--~~~~~~~---~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al 125 (427)
T 3fq8_A 52 NRYIDYVGTWGPAICGHA-HPEVIEALKVAME--KGTSFGA---PCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVL 125 (427)
T ss_dssp CEEEESSGGGTTCTTCBT-CHHHHHHHHHHHT--TCSCCSS---CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHH
T ss_pred CEEEECCCchhhhccCCC-CHHHHHHHHHHHH--hCCCcCC---CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 4689998433 568874 4544443322211 1112222 34568999999999984 557778888899986444
Q ss_pred h---ccCCCCeEEEcCCCCccHHHHHhhh----------cccCC------cEEEEecCCCHHHHHhhcCC---CceEEEE
Q 022194 88 H---LLGTGEEIVAGDDLYGGTDRLLSRV----------TPKTG------VVVKRVNTCDLDEVASAIGP---WTKLVWV 145 (301)
Q Consensus 88 ~---~~~~g~~Vlv~~~~y~~~~~~~~~~----------~~~~g------~~~~~~~~~d~~~l~~~l~~---~~~~v~i 145 (301)
. ....+++|++.++.||+........ ....+ ..+..++.+|++++++++++ ++++|++
T Consensus 126 ~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ 205 (427)
T 3fq8_A 126 RIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVIL 205 (427)
T ss_dssp HHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEE
T ss_pred HHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 2 2344688999999998753211000 00111 12556666789999998864 6888888
Q ss_pred eCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCcccc---CccCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 146 ESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 146 ~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
+.+++++|.+.+ +++|+++|++||+++|+||+|+..... .....+....+.|+||+++ +|++.|++++++
T Consensus 206 ~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~--~G~~~G~~~~~~- 282 (427)
T 3fq8_A 206 EPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLTTLGKIIG--GGLPVGAYGGKR- 282 (427)
T ss_dssp CSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEEEECGGGG--TTSSCEEEEECH-
T ss_pred cCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChhhhhhhhh--CCcceEEEEEcH-
Confidence 888888999988 999999999999999999999832111 1112233333567889996 478899998864
Q ss_pred hHHHHHHHhh---hhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 219 RLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 219 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
.+.+.+.... ...+...++..++++..+++.+ ++..++..++.+++++.|++
T Consensus 283 ~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~ 339 (427)
T 3fq8_A 283 EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLA 339 (427)
T ss_dssp HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 4544333211 2223345777777766665432 33455666666666666654
No 185
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.85 E-value=5.1e-20 Score=170.01 Aligned_cols=173 Identities=16% Similarity=0.214 Sum_probs=126.0
Q ss_pred cccCC-CCch-HHHHHHH-HHhhcC----C--CceEEecch-HHHHHHHH-h-----ccCCCCeEEEcCCCCccHHHHHh
Q 022194 48 DYTRS-GNPT-RDALESL-LAKLDK----A--DRALCFTSG-MAALAAVT-H-----LLGTGEEIVAGDDLYGGTDRLLS 111 (301)
Q Consensus 48 ~y~~~-g~~~-~~~l~~~-l~~~~~----~--~~~i~~~sG-~~ai~~~~-~-----~~~~g~~Vlv~~~~y~~~~~~~~ 111 (301)
.|.+. |.+. ++++.+. +.+..+ . ++.+++++| ++++..+. . ++++||+|++++|.|+++....
T Consensus 133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~- 211 (546)
T 2zy4_A 133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP- 211 (546)
T ss_dssp SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH-
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH-
Confidence 46555 5544 6665544 444432 1 245565555 58886443 3 4789999999999999987432
Q ss_pred hhcccCCcEEEEecCC-------CHHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHH--HHcCCEEEEeCCcC
Q 022194 112 RVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMA--HAHGALLLVDNSIM 179 (301)
Q Consensus 112 ~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~---l~~l~~l~--~~~~~~li~D~~~~ 179 (301)
.....|.+++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|+++| +++|+++|+||+|+
T Consensus 212 -~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~ 290 (546)
T 2zy4_A 212 -ELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG 290 (546)
T ss_dssp -HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTG
T ss_pred -HHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcch
Confidence 234557888888752 788999888888999999999999999976 67788998 78999999999998
Q ss_pred Ccccc--Ccc--CCCCcEEEecccccccCCCCceeeEEEEcchhHHHH
Q 022194 180 SPVLS--RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (301)
Q Consensus 180 ~~~~~--~~~--~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~ 223 (301)
..... ... ..+.++++.||||++ |.+|+|.|+++++++.+.+.
T Consensus 291 ~~~~~~~s~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~l~~~ 337 (546)
T 2zy4_A 291 TFADDFQSLFAICPENTLLVYSFSKYF-GATGWRLGVVAAHQQNVFDL 337 (546)
T ss_dssp GGSTTCCCHHHHCGGGEEEEEESTTTT-TCGGGCEEEEEEESSCHHHH
T ss_pred hhcccCcCHHHhCCCCEEEEEeCcccc-CCCCcceEEEEECCHHHHHH
Confidence 65432 111 125689999999999 66789999999987534443
No 186
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.85 E-value=2.3e-21 Score=174.53 Aligned_cols=248 Identities=16% Similarity=0.148 Sum_probs=158.3
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
..++||.++. .++|.. +|.+......+.. ....+. +..+...++++++++.+ +.+++++++||++|+..++
T Consensus 55 ~~ylD~~~~~~~~~lG~~-~p~v~~a~~~~~~--~~~~~~---~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai 128 (434)
T 3l44_A 55 NKYIDYLAAYGPIITGHA-HPHITKAITTAAE--NGVLYG---TPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTI 128 (434)
T ss_dssp CEEEECCGGGTTCSSCBT-CHHHHHHHHHHHH--HCSCCS---SCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHH
T ss_pred CEEEECCCchhccccCCC-CHHHHHHHHHHHH--hCcCCC---CCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHH
Confidence 4689997432 468874 4544443222211 011111 22455889999999988 5567888888999986443
Q ss_pred -hcc--CCCCeEEEcCCCCccHHHHHhhhcccCC-------------c------EEEEecCCCHHHHHhhcC---CCceE
Q 022194 88 -HLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTG-------------V------VVKRVNTCDLDEVASAIG---PWTKL 142 (301)
Q Consensus 88 -~~~--~~g~~Vlv~~~~y~~~~~~~~~~~~~~g-------------~------~~~~~~~~d~~~l~~~l~---~~~~~ 142 (301)
.+. .++++|++.++.||++... .....+ . .+..++.+|+++++++++ +++++
T Consensus 129 ~~a~~~~~~~~vi~~~~~yhg~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 205 (434)
T 3l44_A 129 RVARAYTGRTKIMKFAGCYHGHSDL---VLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAA 205 (434)
T ss_dssp HHHHHHHCCCEEEEETTCCCCSSGG---GGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHhhCCCEEEEEcCccCCCcHH---HHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEE
Confidence 333 3678999999999986421 111111 1 455666678999998886 46777
Q ss_pred EEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccccC---ccCCCCcEEEecccccccCCCCceeeEEEE
Q 022194 143 VWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAV 215 (301)
Q Consensus 143 v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~~---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~ 215 (301)
|+++.+++++|.+.+ +++|.++|++||++||+||+|....... ....+....+.++||.++ +|++.|++++
T Consensus 206 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~--~G~~iG~~~~ 283 (434)
T 3l44_A 206 ILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLTALGKVIG--GGLPIGAYGG 283 (434)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEEEEEGGGG--TTSSCEEEEE
T ss_pred EEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCeeehhhhhc--CCcCeeeEEE
Confidence 888877777888876 9999999999999999999997431111 111233333567999995 4688999987
Q ss_pred cchhHHHHHHHh---hhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 216 KGERLAKELYFL---QNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 216 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
++ .+.+.+... ....+.+.++..++++..+++.+ ++..++..++.+++++.|++
T Consensus 284 ~~-~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 342 (434)
T 3l44_A 284 KK-EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILE 342 (434)
T ss_dssp CH-HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cH-HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 64 454433221 12234556777777666665533 34456666666666666654
No 187
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.85 E-value=2e-20 Score=171.32 Aligned_cols=216 Identities=15% Similarity=0.074 Sum_probs=155.7
Q ss_pred HHHHHHHHHhhcCCC-------ceEEecchHHHHH-HHHhccCC--------CC-----eEEEcCCCCccHHHHHhhhcc
Q 022194 57 RDALESLLAKLDKAD-------RALCFTSGMAALA-AVTHLLGT--------GE-----EIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-------~~i~~~sG~~ai~-~~~~~~~~--------g~-----~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
.+++++++++++|.+ ..+++++|++++. ++.++..+ |+ +|+++++.|..+. ..++
T Consensus 97 e~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~----~~~~ 172 (502)
T 3hbx_A 97 QNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE----KFAR 172 (502)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHH----HHHH
T ss_pred HHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHH----HHHH
Confidence 456778899999887 2345788888875 55555443 66 8999999998875 5566
Q ss_pred cCCcEEEEecCC------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc------CCEEEEeCCcCCccc
Q 022194 116 KTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH------GALLLVDNSIMSPVL 183 (301)
Q Consensus 116 ~~g~~~~~~~~~------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~------~~~li~D~~~~~~~~ 183 (301)
..|++++.++.+ |++++++++.+++++|++++++||||.+.|+++|+++|+++ |+++++|++|+.+..
T Consensus 173 ~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~ 252 (502)
T 3hbx_A 173 YFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIA 252 (502)
T ss_dssp HTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTH
T ss_pred HcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhh
Confidence 778888888853 78999999999999999999999999999999999999999 999999999985531
Q ss_pred ---cC-----ccCCCCcEEEecccccccCCCCceeeEEEEcchhHH-HHHHHhhhhcC---------CCC---CHHhHHH
Q 022194 184 ---SR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAEG---------SGL---APFDCWI 242 (301)
Q Consensus 184 ---~~-----~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~-~~~~~~~~~~~---------~~~---~~~~~~~ 242 (301)
.. ....++|++..|.||++.+|.| .|+++.+++... +.+.......+ .+. .....++
T Consensus 253 p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g--~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~ 330 (502)
T 3hbx_A 253 PFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYY 330 (502)
T ss_dssp HHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHH
T ss_pred hhhCcccccccCCCCceEEEECcccccCCCCC--eEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHH
Confidence 11 1123789999999999977776 477777655432 21110001111 111 1222333
Q ss_pred HHcc--cccHHHHHHHHHHHHHHHHHHHHhCCCcceEe
Q 022194 243 CLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVN 278 (301)
Q Consensus 243 ~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v~ 278 (301)
++.. .+.+.++.++..++++++.+.|++++++..+.
T Consensus 331 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (502)
T 3hbx_A 331 QLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVS 368 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 3332 23456788899999999999999987665443
No 188
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.85 E-value=1.6e-20 Score=170.31 Aligned_cols=213 Identities=18% Similarity=0.162 Sum_probs=131.9
Q ss_pred CCchHHHHH----HHHHhhcCCCc----eE-EecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHh----hhcccCC
Q 022194 53 GNPTRDALE----SLLAKLDKADR----AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS----RVTPKTG 118 (301)
Q Consensus 53 g~~~~~~l~----~~l~~~~~~~~----~i-~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~----~~~~~~g 118 (301)
|.+..++++ +++++++|.+. +. +++||++|+. ++.++++|||+|++.++.|.++..... ..+...|
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g 173 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATS 173 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcC
Confidence 444444555 89999999985 34 4468998875 778899999999999998876532110 0122233
Q ss_pred cE--EEEec------CCCHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc-----cc
Q 022194 119 VV--VKRVN------TCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LS 184 (301)
Q Consensus 119 ~~--~~~~~------~~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~-----~~ 184 (301)
.. +..++ ..|++++++++. .++++|+++.++|| ...|+++|+++|+++|+++++|++|..+. ..
T Consensus 174 ~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~ 251 (490)
T 2a7v_A 174 IFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp -------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC
T ss_pred CeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCC
Confidence 32 22332 128999999886 46889888888876 46799999999999999999999986442 23
Q ss_pred CccCCCCcEEEecccccccCCCCceeeEEEEcch--------------hHHHHHHHhhhhcC-CCCCHHhHHHHHccc--
Q 022194 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKELYFLQNAEG-SGLAPFDCWICLRGV-- 247 (301)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l-- 247 (301)
.+.. ++|++++|+||+++|| ++|+++++++ .+.+++........ .+......+++..++
T Consensus 252 ~~~~-~aDiv~~S~hK~l~Gp---~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~ 327 (490)
T 2a7v_A 252 SPFK-HADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 327 (490)
T ss_dssp CGGG-TCSEEEEESSGGGCSC---SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHH
T ss_pred CCCC-CCCEEEECCcccCccc---cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 3433 6899999999999776 4699988864 24444443322111 222332222222222
Q ss_pred ---ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 248 ---KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 248 ---~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.+.++.++..+|++++.+.|++.
T Consensus 328 ~~~~~~~~~~~~~~~na~~L~~~L~~~ 354 (490)
T 2a7v_A 328 ACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 234677788999999999999875
No 189
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.85 E-value=8.8e-21 Score=171.99 Aligned_cols=252 Identities=15% Similarity=0.083 Sum_probs=155.6
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccC--CCCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTR--SGNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
.+++||.++ +..+|..+ |.+......+.+ ...+.+.. +..+.+.+++++++++++ .+++++++||++|+.
T Consensus 50 ~~ylD~~~~~~~~~lG~~~-p~v~~A~~~~~~---~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~ 125 (459)
T 4a6r_A 50 NKIIDGMAGLWCVNVGYGR-KDFAEAARRQME---ELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVD 125 (459)
T ss_dssp CEEEETTHHHHTCTTCBCC-HHHHHHHHHHHH---HCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHH
T ss_pred CEEEECCCchhcccCCCCC-HHHHHHHHHHHH---hccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHH
Confidence 468999855 57789864 444433222211 11112222 234568999999999984 457778888899986
Q ss_pred -HHHhccC--------CCCeEEEcCCCCccHHHHHhhhc---------cc--CCcEEEEecC----C---C--------H
Q 022194 85 -AVTHLLG--------TGEEIVAGDDLYGGTDRLLSRVT---------PK--TGVVVKRVNT----C---D--------L 129 (301)
Q Consensus 85 -~~~~~~~--------~g~~Vlv~~~~y~~~~~~~~~~~---------~~--~g~~~~~~~~----~---d--------~ 129 (301)
++..+.. ++++|++.+|.||++........ .. .+.....++. . | +
T Consensus 126 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~ 205 (459)
T 4a6r_A 126 TMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAA 205 (459)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHH
Confidence 4444443 57899999999998753322111 11 1233333222 1 2 6
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccC---ccCCCCcEEEec
Q 022194 130 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSR---PLELGADIVMHS 197 (301)
Q Consensus 130 ~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~---~~~~~~di~~~S 197 (301)
+++++++. +++++|+++.+++++|.+.+ +++|+++|++||+++|+||+|... ..+. ....+....+.+
T Consensus 206 ~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t 285 (459)
T 4a6r_A 206 RWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFT 285 (459)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEE
T ss_pred HHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee
Confidence 78888875 45677777777777777766 999999999999999999998732 2221 111233333446
Q ss_pred ccccccCCCCceeeEEEEcchhHHHHHH---HhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHH-HHHHHHHHHH
Q 022194 198 ATKFIAGHSDVMAGVLAVKGERLAKELY---FLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQ-DNAQKIAEFL 268 (301)
Q Consensus 198 ~sK~~~g~~g~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~-~~~~~l~~~l 268 (301)
+||++++ ++++.|++++++ .+.+.+. ......++..++..+++++..++.+. +..++.. ++.+++++.|
T Consensus 286 ~sK~l~g-g~~~lg~v~~~~-~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l 360 (459)
T 4a6r_A 286 AAKGLSS-GYLPIGAVFVGK-RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRW 360 (459)
T ss_dssp ECGGGGT-TSSCCEEEEECH-HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHH
T ss_pred hhhhhcC-CCCCccceeeCH-HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 8899954 457889998875 4555544 22333445567777777777666432 2344455 5555555555
No 190
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.85 E-value=8.8e-21 Score=170.16 Aligned_cols=251 Identities=14% Similarity=0.111 Sum_probs=153.1
Q ss_pred ceeeecCCCCC--CCCccccCeeecceeecCCCCCCCCccccCC-CCchHHHHHHHHHhhc-C-C-CceEEecchHHHHH
Q 022194 11 TLLMNFSNEFD--PYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLD-K-A-DRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~~~--~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~-~-~-~~~i~~~sG~~ai~ 84 (301)
..++||+++.. ++|. ++|.+........+. .......+ ..+...++++.+++++ + . ++++++++|++|+.
T Consensus 41 ~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~ 116 (426)
T 1sff_A 41 REYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKK---LSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVE 116 (426)
T ss_dssp CEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTT---CSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred CEEEEcccChhhcccCC-CCHHHHHHHHHHHHh---CCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHH
Confidence 36889873332 7887 445454433222111 11111111 2345889999999998 5 3 45666677789986
Q ss_pred HH-H---hccCCCCeEEEcCCCCccHHHHHhhhccc-------CCc---EEEEecCC----------CHHHHHhhcC---
Q 022194 85 AV-T---HLLGTGEEIVAGDDLYGGTDRLLSRVTPK-------TGV---VVKRVNTC----------DLDEVASAIG--- 137 (301)
Q Consensus 85 ~~-~---~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~-------~g~---~~~~~~~~----------d~~~l~~~l~--- 137 (301)
++ . .+.+++ +|++.+|.|+++...+...... .+. .++.++.+ |+++++++++
T Consensus 117 ~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~ 195 (426)
T 1sff_A 117 NAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA 195 (426)
T ss_dssp HHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc
Confidence 44 3 456665 8999999998865322122111 111 14444432 5788888885
Q ss_pred --CCceEEEEe-CCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccc-cC---ccCCCCcEEEecccccccCCC
Q 022194 138 --PWTKLVWVE-SPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL-SR---PLELGADIVMHSATKFIAGHS 206 (301)
Q Consensus 138 --~~~~~v~i~-~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~-~~---~~~~~~di~~~S~sK~~~g~~ 206 (301)
+++++|+++ .++| ||...+ +++|+++|++||+++|+||+|+.... .. ....+.++.+.|+||+++ +
T Consensus 196 ~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~-~- 272 (426)
T 1sff_A 196 APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIA-G- 272 (426)
T ss_dssp CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGG-T-
T ss_pred CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEccccc-C-
Confidence 466788775 4466 997766 99999999999999999999983222 11 112233344558999995 4
Q ss_pred CceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 207 DVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 207 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
|++.|++++++ .+.+.+...........++..+.++..+++.+. +..+++.++.+++.+.|++
T Consensus 273 GlriG~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~ 337 (426)
T 1sff_A 273 GFPLAGVTGRA-EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLA 337 (426)
T ss_dssp SSCCEEEEEEH-HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEcH-HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 78999999985 444433322223334557777766666655443 2445666667777777665
No 191
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.85 E-value=3.4e-20 Score=170.05 Aligned_cols=216 Identities=11% Similarity=0.065 Sum_probs=151.7
Q ss_pred HHHHHHHHHhhcCCC----ceEEecchHHHHH-HHHhcc--------CCC-----C-eEEEcCCCCccHHHHHhhhcccC
Q 022194 57 RDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLL--------GTG-----E-EIVAGDDLYGGTDRLLSRVTPKT 117 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~----~~i~~~sG~~ai~-~~~~~~--------~~g-----~-~Vlv~~~~y~~~~~~~~~~~~~~ 117 (301)
.+++.+++++++|.+ +.+++++||+|+. ++..+. ++| + .|+++++.|+++...+.. .. .
T Consensus 134 e~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~-~g-~ 211 (504)
T 2okj_A 134 EQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAA-LG-F 211 (504)
T ss_dssp HHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH-TT-S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHH-cC-C
Confidence 455668889999875 4667777888875 444332 145 6 788999999988755422 21 1
Q ss_pred Cc-EEEEecCC-----CHHHHHhhcCC------CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC
Q 022194 118 GV-VVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR 185 (301)
Q Consensus 118 g~-~~~~~~~~-----d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~ 185 (301)
|. +++.++.+ |++++++++.+ ++++|++++++|++|.+.|+++|+++|+++|+|+++|++|+.+....
T Consensus 212 g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~ 291 (504)
T 2okj_A 212 GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMS 291 (504)
T ss_dssp CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGC
T ss_pred CcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhC
Confidence 33 67777765 89999998864 58999999999999999999999999999999999999998776531
Q ss_pred -----ccC--CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh-hhhc-CC-------------------CCCH
Q 022194 186 -----PLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAE-GS-------------------GLAP 237 (301)
Q Consensus 186 -----~~~--~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-~~~~-~~-------------------~~~~ 237 (301)
... .++|+++.|+||++++|.+ .|+++.+++.+.+..... .... +. ....
T Consensus 292 ~~~~~~~~g~~~~D~i~~~~hK~~~~p~~--~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~ 369 (504)
T 2okj_A 292 RKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDI 369 (504)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCH
T ss_pred HhhHhhcCCcccCCEEEECchhhcCCCcc--eEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccH
Confidence 111 2689999999999977754 688988875444322111 1000 00 0123
Q ss_pred HhHHHHHccc--ccHHHHHHHHHHHHHHHHHHHHhCCCcce
Q 022194 238 FDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 238 ~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~ 276 (301)
...++++..+ +.+.+..++..++++++.+.|++.+++..
T Consensus 370 l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 410 (504)
T 2okj_A 370 FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEM 410 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 3444444433 33566778888999999999998876643
No 192
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.84 E-value=8e-20 Score=165.49 Aligned_cols=209 Identities=18% Similarity=0.167 Sum_probs=145.2
Q ss_pred CchHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCCCCeEEEcCCCC-ccHHHHHhhhcccCCcEEEEecCC----
Q 022194 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLY-GGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y-~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+...++++.++++++.++++++++|++|+. ++..++++|| +++.+.| ..+. ..+...|.+++.++.+
T Consensus 74 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~----~~~~~~G~~~~~v~~~~~~~ 147 (456)
T 2ez2_A 74 SENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTR----YHQEKNGAVFVDIVRDEAHD 147 (456)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHH----HHHHHTTCEEEECBCGGGGC
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhH----HHHHHcCCEEEEeccccccc
Confidence 4558899999999999999999999999985 6666788999 7778999 4434 4445678888877542
Q ss_pred -----------CHHHHHhhcCCCc----eEEEEeCCCC-Ccccccc---HHHHHHHHHHcCCEEEEeCCcCCc-------
Q 022194 128 -----------DLDEVASAIGPWT----KLVWVESPTN-PRQQICD---IRKIAEMAHAHGALLLVDNSIMSP------- 181 (301)
Q Consensus 128 -----------d~~~l~~~l~~~~----~~v~i~~~~n-p~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~------- 181 (301)
|++++++++.+++ ++|++++|+| |+|.+.+ +++|+++|++||+++|+||+|+.|
T Consensus 148 ~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~ 227 (456)
T 2ez2_A 148 AGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKE 227 (456)
T ss_dssp TTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccc
Confidence 7889998887544 8999999999 9999876 999999999999999999999863
Q ss_pred ---ccc-Ccc-------CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhh-cC----CCCCHHhHHH-HH
Q 022194 182 ---VLS-RPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EG----SGLAPFDCWI-CL 244 (301)
Q Consensus 182 ---~~~-~~~-------~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~-~~ 244 (301)
.+. ... ....|+++.|++|++ ++ + ++|+++++++.+.+.+...... .+ .+.+.....+ +.
T Consensus 228 ~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~-~~-~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~ 304 (456)
T 2ez2_A 228 QEQGFENKSIAEIVHEMFSYADGCTMSGKKDC-LV-N-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAI 304 (456)
T ss_dssp HSTTCTTSCHHHHHHHHHTTCSEEEEETTTTT-CC-S-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHH
T ss_pred cccccCCcchhhhhhhhcccCCEEEEeCcccC-CC-C-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHH
Confidence 121 110 123588888888876 43 3 5799988656666655443322 11 1122222111 22
Q ss_pred cccccH-HHHHHHHHHHHHHHHHHHHhC
Q 022194 245 RGVKTM-ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 245 ~~l~~~-~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..++.+ .+..++..++.+++.+.|++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 305 GLREAMQYEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 222222 345566666777888888763
No 193
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.84 E-value=2.8e-20 Score=169.29 Aligned_cols=254 Identities=17% Similarity=0.127 Sum_probs=163.6
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCcccc-CCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~ 85 (301)
.++|||.++ +.++|..++. +..+...+.+ ...+.+. .+..+.+.+++++++++++ .+.+++++||++|+..
T Consensus 54 ~~ylD~~s~~~~~~lGh~~p~-v~~A~~~~l~---~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~ 129 (476)
T 3i5t_A 54 RRLIDGPAGMWCAQVGYGRRE-IVDAMAHQAM---VLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDS 129 (476)
T ss_dssp CEEEETTHHHHTCTTCBCCHH-HHHHHHHHHH---HCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHH-HHHHHHHHHH---hccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHH
Confidence 468999844 5668986444 4433222211 1112222 2234568999999999984 5678888999999864
Q ss_pred HHh-cc--------CCCCeEEEcCCCCccHHHHHhhhcc-----------cCCcEEEEecC-----C-C--------HHH
Q 022194 86 VTH-LL--------GTGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT-----C-D--------LDE 131 (301)
Q Consensus 86 ~~~-~~--------~~g~~Vlv~~~~y~~~~~~~~~~~~-----------~~g~~~~~~~~-----~-d--------~~~ 131 (301)
++. +. ..+++|++.++.||++......... ..+......+. + + +++
T Consensus 130 Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (476)
T 3i5t_A 130 ALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQE 209 (476)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHH
Confidence 433 32 3467999999999987533211111 12233333222 1 1 778
Q ss_pred HHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccC---cc-CCCCcEEEecc
Q 022194 132 VASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSR---PL-ELGADIVMHSA 198 (301)
Q Consensus 132 l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~---~~-~~~~di~~~S~ 198 (301)
+++.+. +++++|+++.+++++|...+ +++|+++|++||+++|+||+|+.. ..+. .. ..+....+.++
T Consensus 210 le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~ 289 (476)
T 3i5t_A 210 FEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITF 289 (476)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEE
T ss_pred HHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhh
Confidence 888875 56789999988888887654 999999999999999999999732 2221 12 23333333468
Q ss_pred cccccCCCC-ceeeEEEEcchhHHHHHHHh-------hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHH
Q 022194 199 TKFIAGHSD-VMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 199 sK~~~g~~g-~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l 268 (301)
+|++++ | ++.|++++++ .+.+.+... ....+...++..+++++.+++.+. +..++..++.+++++.|
T Consensus 290 sK~l~~--G~~plg~v~~~~-~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L 366 (476)
T 3i5t_A 290 AKGVTS--GYVPLGGLAISE-AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAAL 366 (476)
T ss_dssp CGGGGT--TSSCCEEEEECH-HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred hhhhcC--CCcCeEEEEECH-HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 899964 6 6889998864 555544332 223445668888888877777543 34567777788888888
Q ss_pred HhC
Q 022194 269 ASH 271 (301)
Q Consensus 269 ~~~ 271 (301)
+.+
T Consensus 367 ~~l 369 (476)
T 3i5t_A 367 ASL 369 (476)
T ss_dssp HTT
T ss_pred HHH
Confidence 753
No 194
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.84 E-value=3.5e-20 Score=167.60 Aligned_cols=253 Identities=15% Similarity=0.106 Sum_probs=160.0
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~~~ 86 (301)
..++||.++. .++|.. +|.+......... ......+..+..+.+.++++.++++++ .+++++++||++|+.++
T Consensus 50 ~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~a 126 (449)
T 3a8u_X 50 RKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLS--TLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTA 126 (449)
T ss_dssp CEEEETTHHHHTCTTCBS-CHHHHHHHHHHTT--TCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHH
T ss_pred CEEEECCccHhhccCCCC-CHHHHHHHHHHHH--hCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence 3678886322 478877 4545444322221 111001112233558899999999985 44677788889998644
Q ss_pred H-hccC--------CCCeEEEcCCCCccHHHHHhhhcc-----------cCCcEEEEecC--------CC--------HH
Q 022194 87 T-HLLG--------TGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT--------CD--------LD 130 (301)
Q Consensus 87 ~-~~~~--------~g~~Vlv~~~~y~~~~~~~~~~~~-----------~~g~~~~~~~~--------~d--------~~ 130 (301)
+ .+.. ++|+|++.+|.||+.......... ..++....++. .| ++
T Consensus 127 l~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~ 206 (449)
T 3a8u_X 127 VKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALAD 206 (449)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHH
Confidence 3 3332 679999999999986432111111 12344444432 14 88
Q ss_pred HHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcC-CccccCc---c--CCCCcEEEe
Q 022194 131 EVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP---L--ELGADIVMH 196 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~-~~~~~~~---~--~~~~di~~~ 196 (301)
+++++++ +++++|+++..+|++|.+.+ +++|.++|++||+++|+||+|+ .+..... . ....|++
T Consensus 207 ~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~-- 284 (449)
T 3a8u_X 207 ELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM-- 284 (449)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--
T ss_pred HHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--
Confidence 8988886 46677777766678998877 9999999999999999999995 4332211 1 1234654
Q ss_pred cccccccCCCC-ceeeEEEEcchhHHHHHHHh---------hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSD-VMAGVLAVKGERLAKELYFL---------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKI 264 (301)
Q Consensus 197 S~sK~~~g~~g-~~~g~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l 264 (301)
|+||++++ | ++.|++++++ .+.+.+... ........++..++++..+++.+. +..++..++.+++
T Consensus 285 s~sK~l~~--G~~~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l 361 (449)
T 3a8u_X 285 CIAKQVTN--GAIPMGAVIAST-EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHF 361 (449)
T ss_dssp EECGGGGT--TSSCCEEEEEEH-HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEcccccC--CCCceEEEEECH-HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 88999964 5 7789988874 555554432 112234456777767666666543 3567777778888
Q ss_pred HHHHHhC
Q 022194 265 AEFLASH 271 (301)
Q Consensus 265 ~~~l~~~ 271 (301)
++.|++.
T Consensus 362 ~~~L~~l 368 (449)
T 3a8u_X 362 EKALHGI 368 (449)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 8888763
No 195
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.84 E-value=3.8e-20 Score=167.29 Aligned_cols=207 Identities=22% Similarity=0.171 Sum_probs=142.9
Q ss_pred HHHH-HHHHhhcCCCceEE-ecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhh-hcccCCcEEEEecC------C
Q 022194 58 DALE-SLLAKLDKADRALC-FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNT------C 127 (301)
Q Consensus 58 ~~l~-~~l~~~~~~~~~i~-~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~-~~~~~g~~~~~~~~------~ 127 (301)
+++. +++++++|.+...+ ++||++|+. ++..++++||+|++++|.|+++...... .....+..+..++. .
T Consensus 93 e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 172 (447)
T 3h7f_A 93 ENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLI 172 (447)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSC
T ss_pred HHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCc
Confidence 4455 89999999987666 899998885 6777899999999999998773210000 01112334444442 3
Q ss_pred CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc-----ccCccCCCCcEEEeccccc
Q 022194 128 DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKF 201 (301)
Q Consensus 128 d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~-----~~~~~~~~~di~~~S~sK~ 201 (301)
|++++++++. .++++|++++++||++. ++++|+++|+++|+++|+|++|..+. ...+. .++|+++.|+||+
T Consensus 173 d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~ 249 (447)
T 3h7f_A 173 DMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKT 249 (447)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGG
T ss_pred CHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcC
Confidence 8899999885 47889999999998876 99999999999999999999986442 22222 3579999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhcC-CCCCHH---hHHHH-Hcccc-cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPF---DCWIC-LRGVK-TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~-~~~l~-~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
++|| ++|++++++ .+.+.+........ .+.... +..++ ....+ .+.++.+++.++++++.+.|++.
T Consensus 250 l~G~---~gG~i~~~~-~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 250 LGGG---RSGLIVGKQ-QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp GCCC---SCEEEEECG-GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred CCCC---CeEEEEECH-HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9765 569998875 45554443322222 122221 11111 22222 45677888999999999998765
No 196
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.84 E-value=3.7e-21 Score=173.26 Aligned_cols=252 Identities=15% Similarity=0.123 Sum_probs=162.2
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
..++||.++. +++|. ++|.+........+ ....+. +..+.+.++++++++++ +.+++++++||++|+.+++
T Consensus 56 ~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~--~~~~~~---~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al 129 (434)
T 2epj_A 56 ARIVDLVLAYGPLILGH-KHPRVLEAVEEALA--RGWLYG---APGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAI 129 (434)
T ss_dssp CEEEESSGGGTTCTTCB-TCHHHHHHHHHHHH--TCSCCS---SCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHH
T ss_pred CEEEEcccchhcccCCC-CCHHHHHHHHHHHH--hCCCCC---CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 3688997332 57888 55555544322211 111111 23455889999999998 7778888899999986444
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHhhhc----------ccCCc------EEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLSRVT----------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~~~~----------~~~g~------~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
.+ +.++++|++.++.||++........ ...|+ .+..++..|+++++++++ +++++|++
T Consensus 130 ~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ 209 (434)
T 2epj_A 130 RLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIV 209 (434)
T ss_dssp HHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEE
T ss_pred HHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 43 4556889999999998642110000 11232 355666679999999886 36778888
Q ss_pred eCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccccCc---cCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 146 ESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 146 ~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
+..++++|.+.+ +++|.++|++||+++|+||+|+....... ...+....+.|+||++++ |++.|++++++
T Consensus 210 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~s~sK~l~~--G~~~G~v~~~~- 286 (434)
T 2epj_A 210 EPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGDIIVLGKIIGG--GFPVGAVAGSR- 286 (434)
T ss_dssp CSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCSEEEEEGGGGT--TSSCEEEEECH-
T ss_pred eCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCCeeeecchhcC--CcceeeeeecH-
Confidence 877778999887 99999999999999999999983211111 111222334589999954 67899999875
Q ss_pred hHHHHHHHhh---hhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 219 RLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 219 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.+.... ...+...++..++++...++.+. +..++..++.+++.+.|++.
T Consensus 287 ~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (434)
T 2epj_A 287 EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEV 344 (434)
T ss_dssp HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 4444332211 11233567777777666665543 34566667777777777653
No 197
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.84 E-value=7.5e-21 Score=171.94 Aligned_cols=252 Identities=16% Similarity=0.097 Sum_probs=150.5
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCC-C-CchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
..++||.++ +.++|..+ |.+......+.+ . ..+ +... + .+.+.+++++++++++ .+++++++||++|+.
T Consensus 44 ~~ylD~~~~~~~~~lG~~~-p~v~~A~~~~~~--~-~~~-~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 118 (448)
T 3dod_A 44 KEYYDGFSSVWLNVHGHRK-KELDDAIKKQLG--K-IAH-STLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAME 118 (448)
T ss_dssp CEEEETTHHHHTCSSCBSC-HHHHHHHHHHHT--T-CSC-CCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred CEEEECCcchhhccCCCCC-HHHHHHHHHHHH--h-ccC-ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHH
Confidence 468999844 67899864 444443222211 1 111 2122 2 3458999999999984 457888888999986
Q ss_pred -HHHhccC----C----CCeEEEcCCCCccHHHHHhhhcc---------cCCcEEEEecCC----------------CHH
Q 022194 85 -AVTHLLG----T----GEEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTC----------------DLD 130 (301)
Q Consensus 85 -~~~~~~~----~----g~~Vlv~~~~y~~~~~~~~~~~~---------~~g~~~~~~~~~----------------d~~ 130 (301)
++..+.. + +|+|++.++.||++......... .....+..++.. |++
T Consensus 119 ~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 198 (448)
T 3dod_A 119 IALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLR 198 (448)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHH
Confidence 4444433 3 49999999999987532111100 001122333332 278
Q ss_pred HHHhhcC---CCceEEEEeCCC-CCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEecc
Q 022194 131 EVASAIG---PWTKLVWVESPT-NPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSA 198 (301)
Q Consensus 131 ~l~~~l~---~~~~~v~i~~~~-np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~S~ 198 (301)
++++++. +++++|+++.++ |++|...+ +++|+++|++||+++|+||+|+.. ... .....+....+.++
T Consensus 199 ~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~ 278 (448)
T 3dod_A 199 ELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAA 278 (448)
T ss_dssp HHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE
T ss_pred HHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEe
Confidence 8888886 567888888887 88887765 999999999999999999998732 111 11223433345568
Q ss_pred cccccCCCC-ceeeEEEEcchhHHHHHHH-------hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHH
Q 022194 199 TKFIAGHSD-VMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFL 268 (301)
Q Consensus 199 sK~~~g~~g-~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l 268 (301)
+|++++ | ++.|++++++ .+.+.+.. .....+...++..+++++.+++.+. +..++..++.+++++.|
T Consensus 279 sK~l~~--G~~~ig~v~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l 355 (448)
T 3dod_A 279 GKGITG--GYLPIAVTFATE-DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLL 355 (448)
T ss_dssp CGGGGT--TSSCCEEEEEEH-HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred cccccC--CcCceEEEEECH-HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 999954 6 5889998875 45554332 2223345567777777777776542 33556666666666666
Q ss_pred Hh
Q 022194 269 AS 270 (301)
Q Consensus 269 ~~ 270 (301)
++
T Consensus 356 ~~ 357 (448)
T 3dod_A 356 QD 357 (448)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 198
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.84 E-value=3.2e-20 Score=168.33 Aligned_cols=259 Identities=13% Similarity=0.037 Sum_probs=159.2
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCC--CCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
.+++||+++ +.++|..++.+..+.. .+.. ...+.+... ..+.+.+++++++++++ .+++++++||++|+.
T Consensus 51 ~~~lD~~~~~~~~~lG~~~p~v~~A~~-~~~~---~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~ 126 (460)
T 3gju_A 51 RKSIDAFAGLYCVNVGYGRQKIADAIA-TQAK---NLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANE 126 (460)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHH-HHHH---HHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHH-HHHH---hccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHH
Confidence 468999844 4678876444443321 2111 011122222 23458999999999874 457788888999986
Q ss_pred HHH-hcc--------CCCCeEEEcCCCCccHHHHHhhh---------cccC--CcEEEEecC----CC------------
Q 022194 85 AVT-HLL--------GTGEEIVAGDDLYGGTDRLLSRV---------TPKT--GVVVKRVNT----CD------------ 128 (301)
Q Consensus 85 ~~~-~~~--------~~g~~Vlv~~~~y~~~~~~~~~~---------~~~~--g~~~~~~~~----~d------------ 128 (301)
+++ .+. .++++|++.++.||++....... .... ++....++. ++
T Consensus 127 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~ 206 (460)
T 3gju_A 127 TNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHC 206 (460)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHH
Confidence 443 443 35689999999999875332111 1111 233333222 12
Q ss_pred HHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccC---ccCCCCcEEEe
Q 022194 129 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSR---PLELGADIVMH 196 (301)
Q Consensus 129 ~~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~---~~~~~~di~~~ 196 (301)
++++++++. +++++|+++.++|++|.+.+ +++|+++|++||+++|+||+|+.. ..+. ....+....+.
T Consensus 207 ~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~ 286 (460)
T 3gju_A 207 ADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI 286 (460)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence 588888876 56788888888888888665 999999999999999999998732 2221 11223333345
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHh-------hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEF 267 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~ 267 (301)
++||++++ +.++.|++++++ .+.+.+... ....++..++..+++++.+++.+. +..++..++.+++++.
T Consensus 287 t~sK~l~g-G~~~lg~v~~~~-~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~ 364 (460)
T 3gju_A 287 TIAKGLTS-AYAPLSGVIVAD-RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAE 364 (460)
T ss_dssp EECGGGTT-TSSCCEEEEEEH-HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred eeehhhcC-CCCCeEEEEECH-HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 68999954 336789998875 455544321 233445667777777777766432 2345555555555555
Q ss_pred H----HhCCCcc
Q 022194 268 L----ASHPRVK 275 (301)
Q Consensus 268 l----~~~~~v~ 275 (301)
| ++++.+.
T Consensus 365 l~~~l~~~~~~~ 376 (460)
T 3gju_A 365 LAKAVGGHKNVG 376 (460)
T ss_dssp HHHHHTTSTTEE
T ss_pred HHHHHhcCCCeE
Confidence 4 4455443
No 199
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.84 E-value=5.2e-20 Score=163.94 Aligned_cols=205 Identities=20% Similarity=0.153 Sum_probs=140.2
Q ss_pred HHHHHHhhcCCCceE-EecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecC------CCH
Q 022194 60 LESLLAKLDKADRAL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT------CDL 129 (301)
Q Consensus 60 l~~~l~~~~~~~~~i-~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~------~d~ 129 (301)
+++++++++|.+... ++++|++++. ++..++++||+|++++|.|+.+...+ ......| .++..++. .|+
T Consensus 74 ~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (405)
T 2vi8_A 74 ARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHG-SPVNFSGVQYNFVAYGVDPETHVIDY 152 (405)
T ss_dssp HHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTT-CTTSHHHHHSEEEEECBCTTTCSBCH
T ss_pred HHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhccc-chhhhccceeEEEecccccccCCcCH
Confidence 446999999988554 4689998885 66667899999999999998774100 0011222 36666653 278
Q ss_pred HHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccC---CCCcEEEecccccccC
Q 022194 130 DEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLE---LGADIVMHSATKFIAG 204 (301)
Q Consensus 130 ~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~---~~~di~~~S~sK~~~g 204 (301)
+++++++.+ ++++|++ +++| .|...++++|.++|+++|+++|+||+|+.+.... ... .+.|++++|+||+++|
T Consensus 153 ~~l~~~i~~~~~~~v~~-~~~~-~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g 230 (405)
T 2vi8_A 153 DDVREKARLHRPKLIVA-AAAA-YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRG 230 (405)
T ss_dssp HHHHHHHHHHCCSEEEE-CCSS-CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCC
T ss_pred HHHHHHHHhcCCeEEEE-eCCC-CCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCC
Confidence 999999875 7888887 4444 3566789999999999999999999998543221 111 1578999999999976
Q ss_pred CCCceeeEEEEcchhHHHHHHHhhhhcC-CCCCHHhHHHHHcccc-----cHHHHHHHHHHHHHHHHHHHHhC
Q 022194 205 HSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.| |+++++ +.+.+.+........ .+.++....++..+++ .+.+..++..++++++.+.|+++
T Consensus 231 ~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 299 (405)
T 2vi8_A 231 PRG---GMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299 (405)
T ss_dssp CSC---EEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCC---eEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 654 888887 456555544332222 2233433333333322 34667788888889999999876
No 200
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.84 E-value=6.1e-20 Score=167.39 Aligned_cols=211 Identities=16% Similarity=0.095 Sum_probs=146.1
Q ss_pred HHHHHHHHHhhcCCCc-----eEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhh----hcccCC--cEEEEe
Q 022194 57 RDALESLLAKLDKADR-----ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR----VTPKTG--VVVKRV 124 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~-----~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~----~~~~~g--~~~~~~ 124 (301)
++++++++++++|.+. .+++++|++++. ++.++++|||+|+++++.|+++...+.. .+...| +.++.+
T Consensus 92 e~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~ 171 (483)
T 1rv3_A 92 ETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY 171 (483)
T ss_dssp HHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE
T ss_pred HHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEEC
Confidence 3455589999999872 388899997775 5778899999999999999887532110 112222 445554
Q ss_pred cC------CCHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-----CccCCCCc
Q 022194 125 NT------CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGAD 192 (301)
Q Consensus 125 ~~------~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~d 192 (301)
+. .|++++++++. .++++|++ +++|++ .+.|+++|+++|+++|+++++|++|..+... .+.. ++|
T Consensus 172 ~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~d 248 (483)
T 1rv3_A 172 KVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCH 248 (483)
T ss_dssp CBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCS
T ss_pred ccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-CCc
Confidence 21 28999999998 78999999 888888 8889999999999999999999998754322 2222 689
Q ss_pred EEEecccccccCCCCceeeEEEEcchh--------------HHHHHHHhhh-hcCCCCCHHhHHH---HHccc--ccHHH
Q 022194 193 IVMHSATKFIAGHSDVMAGVLAVKGER--------------LAKELYFLQN-AEGSGLAPFDCWI---CLRGV--KTMAL 252 (301)
Q Consensus 193 i~~~S~sK~~~g~~g~~~g~~~~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~---~~~~l--~~~~~ 252 (301)
++++|+||++.|| ++|+++++++. +.+.+..... ....+.......+ ++... ..+.+
T Consensus 249 iv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~ 325 (483)
T 1rv3_A 249 VVTTTTHKTLRGC---RAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKE 325 (483)
T ss_dssp EEEEESSGGGCCC---SCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHH
T ss_pred EEEecCcccCCCC---CceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHH
Confidence 9999999999776 46999988652 2232222111 1112222222222 22221 23567
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc
Q 022194 253 RVEKQQDNAQKIAEFLASHPRV 274 (301)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~v 274 (301)
+.++..++++++.+.|+++ ++
T Consensus 326 ~~~~~~~~~~~l~~~L~~~-g~ 346 (483)
T 1rv3_A 326 YQRQVVANCRALSAALVEL-GY 346 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHHHHHHhc-CC
Confidence 7788899999999999886 44
No 201
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.84 E-value=4.1e-20 Score=166.86 Aligned_cols=155 Identities=14% Similarity=0.130 Sum_probs=116.8
Q ss_pred chHHHHHHHHHhhcCCCceEEecch-HHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--C---
Q 022194 55 PTRDALESLLAKLDKADRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--C--- 127 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG-~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--~--- 127 (301)
...+++++++++ +|.++.+++++| ++++. ++.+++++||+|+++++.|+++...+ ...|.++++++. +
T Consensus 57 ~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~----~~~G~~~~~v~~~~~~~~ 131 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHAL----DISQQEGHFIETHQSPLT 131 (446)
T ss_dssp SHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHH----HHHTCCEEECEEEECTTT
T ss_pred hHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHH----HHcCCeEEEEeCeecccc
Confidence 458899999999 998877777777 58885 66777899999999999999987544 335666666665 2
Q ss_pred ------CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcc-c----cCccCCCCcEEEe
Q 022194 128 ------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-L----SRPLELGADIVMH 196 (301)
Q Consensus 128 ------d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~-~----~~~~~~~~di~~~ 196 (301)
|++++ +.+++++|++++ .|++|.+.|+++|+++|+++|+++|+||+|+... + ......++|+++.
T Consensus 132 ~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~~ 207 (446)
T 2x3l_A 132 NHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQ 207 (446)
T ss_dssp SSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEEE
T ss_pred CcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEEE
Confidence 34555 456789999999 5569999999999999999999999999998622 1 1233457899999
Q ss_pred cccccccCCCCceeeEEEEcchhH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERL 220 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~ 220 (301)
|+||+++++.+ +|+++++++.+
T Consensus 208 S~~K~l~~~~g--~g~l~~~~~~i 229 (446)
T 2x3l_A 208 SFHKTLPALTM--GSVLYIHKNAP 229 (446)
T ss_dssp CHHHHSSSCTT--CEEEEEETTCT
T ss_pred CCccccccccc--cEEEEEcCCcC
Confidence 99998777655 58888876543
No 202
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.83 E-value=1.5e-20 Score=168.95 Aligned_cols=247 Identities=15% Similarity=0.091 Sum_probs=159.6
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
.+++||.++. .++|.. +|.+......+.+ ....+. +..+...++++.+++.+ +.+++++++||++|+..++
T Consensus 53 ~~ylD~~~~~~~~~lG~~-~p~v~~A~~~~~~--~~~~~~---~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai 126 (429)
T 3k28_A 53 NEYIDYVLSWGPLIHGHA-NDRVVEALKAVAE--RGTSFG---APTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSAL 126 (429)
T ss_dssp CEEEESCGGGTTCTTCBS-CHHHHHHHHHHHH--HCSCCS---SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHH
T ss_pred CEEEECCCChhhcccCCC-CHHHHHHHHHHHh--hCcCcC---CCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHH
Confidence 4789998432 468874 4544443222211 011111 23456889999999988 5667888888999986443
Q ss_pred -hcc--CCCCeEEEcCCCCccHHHHHhhhcccCC-------------------cEEEEecCCCHHHHHhhcC---CCceE
Q 022194 88 -HLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTG-------------------VVVKRVNTCDLDEVASAIG---PWTKL 142 (301)
Q Consensus 88 -~~~--~~g~~Vlv~~~~y~~~~~~~~~~~~~~g-------------------~~~~~~~~~d~~~l~~~l~---~~~~~ 142 (301)
.+. .++++|++.++.||+.... .....+ ..+..++.+|+++++++++ +++++
T Consensus 127 ~~a~~~~~~~~vi~~~~~yhg~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 203 (429)
T 3k28_A 127 RLARGYTGRNKILKFIGCYHGHGDS---LLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIAC 203 (429)
T ss_dssp HHHHHHHTCCEEEEEETCCCCSCGG---GCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHhhCCCEEEEECCCcCCCcHH---HHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEE
Confidence 332 3678999999999876421 111111 1345556668999998886 46778
Q ss_pred EEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccccC----ccCCCCcEEEecccccccCCCCceeeEEE
Q 022194 143 VWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAGHSDVMAGVLA 214 (301)
Q Consensus 143 v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~~----~~~~~~di~~~S~sK~~~g~~g~~~g~~~ 214 (301)
|+++.+++++|.+.+ +++|.++|++||+++|+||+|... ... ....+....+.++||++++ |++.|+++
T Consensus 204 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~--G~~iG~~~ 280 (429)
T 3k28_A 204 VIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIGG--GLPVGAYG 280 (429)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGT--TSCCEEEE
T ss_pred EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhcC--CCCeEEEE
Confidence 888877777888877 999999999999999999999643 211 1112333345579999953 67899998
Q ss_pred EcchhHHHHHHHhh---hhcCCCCCHHhHHHHHcccccH-HHHHHHHHHHHHHHHHHHHh
Q 022194 215 VKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTM-ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 215 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~l~~ 270 (301)
+++ .+.+.+.... ...+.+.++..++++..+++.. ++.++++.++.+++.+.|++
T Consensus 281 ~~~-~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 281 GKA-EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRK 339 (429)
T ss_dssp ECH-HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EcH-HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 875 4544332211 2233456777766666555432 55667777777778777765
No 203
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.83 E-value=1.7e-20 Score=171.80 Aligned_cols=216 Identities=14% Similarity=0.137 Sum_probs=145.8
Q ss_pred HHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHh----cc---------CC------CC-eEEEcCCCCccHHHHHhh
Q 022194 57 RDALESLLAKLDKAD---RALCFTSGMAALA-AVTH----LL---------GT------GE-EIVAGDDLYGGTDRLLSR 112 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~----~~---------~~------g~-~Vlv~~~~y~~~~~~~~~ 112 (301)
.+++++++++++|.+ +.+++++|++|+. ++.. ++ .+ |+ .|+++++.|+++...+.
T Consensus 142 e~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~- 220 (497)
T 2qma_A 142 EQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSAS- 220 (497)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHH-
T ss_pred HHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHH-
Confidence 445677799999873 5667777788875 3333 12 12 45 78999899998875442
Q ss_pred hcccCCc-EEEEecCC-----CHHHHHhhcCCC----c--eEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCC
Q 022194 113 VTPKTGV-VVKRVNTC-----DLDEVASAIGPW----T--KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS 180 (301)
Q Consensus 113 ~~~~~g~-~~~~~~~~-----d~~~l~~~l~~~----~--~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~ 180 (301)
... .|. +++.++.+ |+++++++++++ + .+|+++.++|++|.+.|+++|+++|++||+|+++|++|+.
T Consensus 221 ~~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~ 299 (497)
T 2qma_A 221 WMG-LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGG 299 (497)
T ss_dssp HTT-SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGG
T ss_pred HcC-CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhH
Confidence 121 133 67777765 789999888642 3 4888899999999999999999999999999999999987
Q ss_pred ccccCcc-----C-CCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh----hhc---C----CC------CCH
Q 022194 181 PVLSRPL-----E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAE---G----SG------LAP 237 (301)
Q Consensus 181 ~~~~~~~-----~-~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~----~~~---~----~~------~~~ 237 (301)
+...... . .++|+++.|+||++++|.+ .|+++.+++...+.+.... ... . .. ...
T Consensus 300 ~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~--~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~a 377 (497)
T 2qma_A 300 ALILSSHKSRLKGVERAHSISVDFHKLFYQTIS--CGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDA 377 (497)
T ss_dssp GGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS--CEEEEESCGGGGGGGCC--------------------CCSCCCTH
T ss_pred HHHhCcchHhhcCcccCCEEEEcchhccCCCcc--eEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhH
Confidence 7653221 1 2579999999999987754 5888887665332211000 000 0 00 012
Q ss_pred HhHHHHHccc--ccHHHHHHHHHHHHHHHHHHHHhCCCcce
Q 022194 238 FDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKK 276 (301)
Q Consensus 238 ~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~ 276 (301)
...++.++.+ +.+.+..++..++++++.+.|++.+++..
T Consensus 378 l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 418 (497)
T 2qma_A 378 LKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFEL 418 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 2233333333 33567778888999999999998876643
No 204
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.83 E-value=5e-20 Score=165.74 Aligned_cols=253 Identities=14% Similarity=0.095 Sum_probs=155.5
Q ss_pred ceeeecCCCCC--CCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEecchHHHHHHH
Q 022194 11 TLLMNFSNEFD--PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~~~--~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~~--~~~i~~~sG~~ai~~~ 86 (301)
..++||.++.. ++|. ++|.+........+ . ..+....+..+.+.++++.+++.++. +++++++||++|+.++
T Consensus 43 ~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~--~-~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a 118 (433)
T 1zod_A 43 RAILDFTSGQMSAVLGH-CHPEIVSVIGEYAG--K-LDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAA 118 (433)
T ss_dssp CEEEETTHHHHTCTTCB-TCHHHHHHHHHHHH--H-CCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHH
T ss_pred CEEEEcccchhccccCC-CCHHHHHHHHHHHH--h-CcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHH
Confidence 46889863332 6786 45555443222111 0 11111112234588999999999864 4677777889998644
Q ss_pred Hhc-c--CCCCeEEEcCCCCccHHHHHhhhc----------ccCCcEEEEecC------C---------CHHHHHhhcC-
Q 022194 87 THL-L--GTGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNT------C---------DLDEVASAIG- 137 (301)
Q Consensus 87 ~~~-~--~~g~~Vlv~~~~y~~~~~~~~~~~----------~~~g~~~~~~~~------~---------d~~~l~~~l~- 137 (301)
+.+ . ..+++|++.+|.||+......... ...++....++. . |+++++++++
T Consensus 119 ~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 198 (433)
T 1zod_A 119 IRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDR 198 (433)
T ss_dssp HHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHh
Confidence 432 2 346899999999998643221111 112444444432 1 3888988886
Q ss_pred ---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC-ccccCc---cCCCCcEEEecccccccCCC
Q 022194 138 ---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP---LELGADIVMHSATKFIAGHS 206 (301)
Q Consensus 138 ---~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~-~~~~~~---~~~~~di~~~S~sK~~~g~~ 206 (301)
+++++|+++..+||+|...+ +++|+++|++||+++|+||+|+. +..... ...+.+..+.|+||++++
T Consensus 199 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~-- 276 (433)
T 1zod_A 199 QSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGA-- 276 (433)
T ss_dssp HCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHT--
T ss_pred cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccC--
Confidence 46677777666688997655 99999999999999999999983 222211 111333334589999964
Q ss_pred CceeeEEEEcchhHHHHHHHhhhh--cCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 207 DVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 207 g~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
|++.|++++++ .+.+.+...... .....++..+.++..+++.+. +..+++.++.+++.+.|++
T Consensus 277 G~~ig~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~ 343 (433)
T 1zod_A 277 GLPLAAIVTSA-AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLD 343 (433)
T ss_dssp TSSCEEEEECH-HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEhH-HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 68899999875 555555442222 334456777766666665432 2445666666677766654
No 205
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.83 E-value=1.5e-19 Score=172.22 Aligned_cols=210 Identities=13% Similarity=0.066 Sum_probs=151.4
Q ss_pred hHHHHHHHHHhhcCCCceEEecchH-HHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------
Q 022194 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~~i~~~sG~-~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------ 127 (301)
...++++.+++++|.++.+++++|+ +++. ++.+++++||+|+++.+.|.++... +...|+++++++..
T Consensus 206 ~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~----~~~~G~~~v~v~~~~~~~g~ 281 (755)
T 2vyc_A 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG----LMLTGAKPVYMVPSRNRYGI 281 (755)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HHHHCCEEEEECCCBCTTSC
T ss_pred HHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH----HHHcCCEEEEEeCCCCcccc
Confidence 3788999999999999888888886 7774 7778899999999999999988744 34468888887642
Q ss_pred ---------CHHHHHhhcCC--Cce--------EEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc----
Q 022194 128 ---------DLDEVASAIGP--WTK--------LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (301)
Q Consensus 128 ---------d~~~l~~~l~~--~~~--------~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~---- 184 (301)
|++++++++++ +++ ++++++| |++|.+.|+++|+++|+++|+++++|++|+.+...
T Consensus 282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~ 360 (755)
T 2vyc_A 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY 360 (755)
T ss_dssp BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGG
T ss_pred ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCccc
Confidence 78999988853 343 8899998 78999999999999999999999999999754221
Q ss_pred ---CccCCC--CcE------EEecccccccCCCCceeeEEEEcch--hH-HHHHHHhhhhc-CCCCCHHhHHHHHcccc-
Q 022194 185 ---RPLELG--ADI------VMHSATKFIAGHSDVMAGVLAVKGE--RL-AKELYFLQNAE-GSGLAPFDCWICLRGVK- 248 (301)
Q Consensus 185 ---~~~~~~--~di------~~~S~sK~~~g~~g~~~g~~~~~~~--~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~l~- 248 (301)
.+. .+ +|+ ++.|+||+++|+.+ +|+++.+++ .+ ...+....... ..+.+....+.+..+++
T Consensus 361 ~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~~--g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~ 437 (755)
T 2vyc_A 361 ADHYAM-RGEPGDHNGPTVFATHSTHKLLNALSQ--ASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSM 437 (755)
T ss_dssp TTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCTT--CEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHH
T ss_pred CCcchh-cCCcCCccCCCeEEEECccccccCcCC--eeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 111 35 565 99999999977653 577777654 22 12222222222 23333333333322322
Q ss_pred --c--HHHHHHHHHHHHHHHHHHHHhCCC
Q 022194 249 --T--MALRVEKQQDNAQKIAEFLASHPR 273 (301)
Q Consensus 249 --~--~~~~~~~~~~~~~~l~~~l~~~~~ 273 (301)
. ..++.++..++++++++.|+++++
T Consensus 438 l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 438 MDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2 346778888889999999987654
No 206
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.83 E-value=1.2e-20 Score=169.38 Aligned_cols=251 Identities=15% Similarity=0.115 Sum_probs=159.5
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
..++||.++. +++|. ++|.+........+ ....+. +..+.+.++++++++++ +.+++++++||++|+.+++
T Consensus 52 ~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~--~~~~~~---~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al 125 (424)
T 2e7u_A 52 NRYLDYVMSWGPLILGH-AHPKVLARVRETLE--RGLTFG---APSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSAL 125 (424)
T ss_dssp CEEEESSGGGTTCTTCB-TCHHHHHHHHHHHH--TCSCCS---SCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHH
T ss_pred CEEEEccccccccccCC-CCHHHHHHHHHHHH--hCCCCC---CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 3688997332 68898 56655544322211 111111 22345899999999998 6677888888999986444
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHhhhc----------ccCCc------EEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLSRVT----------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~~~~----------~~~g~------~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
.+ +.++++|++.+|.||++........ ...|+ .+..++..|+++++++++ +++++|++
T Consensus 126 ~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ 205 (424)
T 2e7u_A 126 RLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIF 205 (424)
T ss_dssp HHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEE
T ss_pred HHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 32 4456889999999998642110100 01232 355666679999998886 45666666
Q ss_pred eCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCccccCc---cCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 146 ESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 146 ~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~~~~~~---~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
+..++++|.+.+ +++|.++ ++||+++|+||+|+....... ...+....+.|+||++++ |++.|++++++
T Consensus 206 ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~s~sK~l~~--G~~~G~~~~~~- 281 (424)
T 2e7u_A 206 EPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDLVTLGKILGG--GLPAAAYAGRR- 281 (424)
T ss_dssp CSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSEEEECGGGGT--TSSCEEEEECH-
T ss_pred eCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcchhhhhhhhhC--CcceEEEEEcH-
Confidence 554445898876 9999999 999999999999983311111 111222224489999953 68899999875
Q ss_pred hHHHHHHHhh---hhcCCCCCHHhHHHHHcccccHH---HHHHHHHHHHHHHHHHHHhC
Q 022194 219 RLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 219 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~~~l~~~ 271 (301)
.+.+.+.... ...+...++..++++...++.+. +..+++.++.+++.+.|++.
T Consensus 282 ~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 340 (424)
T 2e7u_A 282 EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEV 340 (424)
T ss_dssp HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 4544333211 11233556777777666665543 35667777777888777653
No 207
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.83 E-value=3.4e-20 Score=166.70 Aligned_cols=251 Identities=14% Similarity=0.116 Sum_probs=153.6
Q ss_pred ceeeecCCCC--CCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
.+++||.++. ..+|..+ |.+......+.+ ....+.| ..+...++++++++.+ +.+++++++||++|+..++
T Consensus 53 ~~ylD~~~~~~~~~lG~~~-p~v~~A~~~~~~--~~~~~~~---~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al 126 (429)
T 4e77_A 53 KAYIDYVGSWGPMILGHNH-PAIRQAVIEAVE--RGLSFGA---PTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAI 126 (429)
T ss_dssp CEEEESSGGGTTCTTCBTC-HHHHHHHHHHHT--TCSCCSS---CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHH
T ss_pred CEEEECCCchhccccCCCC-HHHHHHHHHHHH--hCcccCC---CCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHH
Confidence 4789997433 4577654 444433222211 1111222 3456889999999988 4567888888999986444
Q ss_pred hc---cCCCCeEEEcCCCCccHHHHHh----------------hhcccCCcEEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 88 HL---LGTGEEIVAGDDLYGGTDRLLS----------------RVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 88 ~~---~~~g~~Vlv~~~~y~~~~~~~~----------------~~~~~~g~~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
.+ ..++++|++.++.||+...... .........+..++..|+++++++++ +++++|++
T Consensus 127 ~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ 206 (429)
T 4e77_A 127 RLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIV 206 (429)
T ss_dssp HHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEE
T ss_pred HHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEE
Confidence 32 2457889999999998753110 00011112455666678999998886 35666666
Q ss_pred eCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc---cccCccCCCCcEEEecccccccCCCCceeeEEEEcch
Q 022194 146 ESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP---VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (301)
Q Consensus 146 ~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~---~~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~ 218 (301)
+..++++|.+.+ +++|.++|++||+++|+||+|+.. ........+.+..+.|+||.++ +|++.|++++++
T Consensus 207 ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~t~sK~~~--~G~~~G~~~~~~- 283 (429)
T 4e77_A 207 EPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLTCLGKIIG--GGMPVGAFGGRR- 283 (429)
T ss_dssp CSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEEEEEGGGG--TTSCCEEEEECH-
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCeeeeccccc--CCCCeEEEEECH-
Confidence 655555677776 999999999999999999999832 2111112233333458999996 367899998864
Q ss_pred hHHHHHHHh---hhhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 219 RLAKELYFL---QNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 219 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
.+.+.+... ....+++.++..++++...++.+ ++..++..++.+++++.|++
T Consensus 284 ~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 340 (429)
T 4e77_A 284 EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRH 340 (429)
T ss_dssp HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 444433221 12233456777777766665533 34455666666666666654
No 208
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.83 E-value=2.9e-20 Score=168.18 Aligned_cols=254 Identities=16% Similarity=0.142 Sum_probs=152.5
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~ 85 (301)
..++||.++ ...+|.. +|.+......+.+ ....+.+..+..+.+.+++++++++++ .+++++++||++|+.+
T Consensus 61 ~~ylD~~~~~~~~~lGh~-~p~v~~A~~~~~~--~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~ 137 (451)
T 3oks_A 61 NRLIDLGSGIAVTTVGNS-APKVVEAVRSQVG--DFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVEN 137 (451)
T ss_dssp CEEEESSHHHHTCTTCTT-CHHHHHHHHHHHT--TCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHH
T ss_pred CEEEEcCCCccccccCCC-CHHHHHHHHHHHH--hcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHH
Confidence 468999854 5668865 4444443322211 112222222234558899999999985 3468888999999864
Q ss_pred HHhc-c--CCCCeEEEcCCCCccHHHHHhhhc----------ccCCcEEEEecCC------------------CHHHHHh
Q 022194 86 VTHL-L--GTGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNTC------------------DLDEVAS 134 (301)
Q Consensus 86 ~~~~-~--~~g~~Vlv~~~~y~~~~~~~~~~~----------~~~g~~~~~~~~~------------------d~~~l~~ 134 (301)
++.+ . ..+++|++.++.||++........ ......+..++.. +++.+++
T Consensus 138 Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (451)
T 3oks_A 138 AVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAIT 217 (451)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHH
Confidence 4433 2 245899999999998754322211 1111133444432 2333333
Q ss_pred hc----C-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEeccccc
Q 022194 135 AI----G-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSATKF 201 (301)
Q Consensus 135 ~l----~-~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~S~sK~ 201 (301)
.+ . +++++|+++..++..|.+.+ +++|+++|++||+++|+||+|... ... .....+....+.|++|+
T Consensus 218 ~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~ 297 (451)
T 3oks_A 218 VIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKG 297 (451)
T ss_dssp HHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGG
T ss_pred HHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhh
Confidence 33 3 34556666655555566655 999999999999999999998732 211 11222333334489999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
+++ |++.|++++++ .+.+.+.......+++.++..+++++..++.+. +..++..++.+++++.|++
T Consensus 298 l~~--G~~iG~v~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 365 (451)
T 3oks_A 298 IAG--GLPLSAVTGRA-EIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGR 365 (451)
T ss_dssp GGT--TSSCEEEEEEH-HHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred hhC--CcceEEEEECH-HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 954 68899998864 455544333444556677888777777766442 2345555555566555543
No 209
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.83 E-value=1.2e-19 Score=165.76 Aligned_cols=215 Identities=16% Similarity=0.167 Sum_probs=151.4
Q ss_pred HHHHHHHHHhhcCCCc-----------eEEecchHHHHH-HHHhccC---C------CC--------e--EEEcCCCCcc
Q 022194 57 RDALESLLAKLDKADR-----------ALCFTSGMAALA-AVTHLLG---T------GE--------E--IVAGDDLYGG 105 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~-----------~i~~~sG~~ai~-~~~~~~~---~------g~--------~--Vlv~~~~y~~ 105 (301)
.+++.+++++++|.+. .+++++||+|+. ++..+.. + || + |+++.+.|++
T Consensus 115 e~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s 194 (486)
T 1js3_A 115 ETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSS 194 (486)
T ss_dssp HHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHH
T ss_pred HHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHH
Confidence 4567778889988763 577888888874 4433321 1 32 3 7789999988
Q ss_pred HHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCCc------eEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 106 TDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWT------KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~------~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
+. ..++..|++++.++.+ |+++|++++.+++ .+|++++++|++|.+.|+++|+++|++||+|+++
T Consensus 195 ~~----~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhv 270 (486)
T 1js3_A 195 VE----RAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHV 270 (486)
T ss_dssp HH----HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred HH----HHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEE
Confidence 76 5556678899999874 8999999997544 3889999999999999999999999999999999
Q ss_pred eCCcCCccccCc--c-----CCCCcEEEecccccccCCCCceeeEEEEcchhH-HHHHH----Hhhh-h-----------
Q 022194 175 DNSIMSPVLSRP--L-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELY----FLQN-A----------- 230 (301)
Q Consensus 175 D~~~~~~~~~~~--~-----~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~-~~~~~----~~~~-~----------- 230 (301)
|++|+.+.+..+ . ..++|+++.|+||++++|. ..|+++.+++.. .+.+. .... .
T Consensus 271 D~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~--~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 348 (486)
T 1js3_A 271 DAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNF--DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRH 348 (486)
T ss_dssp ECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESCHHHHHGGGC------------CCSCCCGGG
T ss_pred ehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCc--ceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccc
Confidence 999987654321 1 1257999999999997664 468898887653 22210 0000 0
Q ss_pred ----cCCCCCHHhHHHHHcc--cccHHHHHHHHHHHHHHHHHHHHhCCCcceE
Q 022194 231 ----EGSGLAPFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (301)
Q Consensus 231 ----~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v 277 (301)
.+........++++.. .+.+.+..++..++++++.+.|++.+++..+
T Consensus 349 ~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 401 (486)
T 1js3_A 349 WQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVC 401 (486)
T ss_dssp SSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEC
T ss_pred cCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 0001223334444332 3446777888889999999999988776543
No 210
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.83 E-value=2e-19 Score=168.81 Aligned_cols=208 Identities=13% Similarity=0.053 Sum_probs=154.1
Q ss_pred hHHHHHHHHHhhcCCCceEEecchH-HHH-HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------
Q 022194 56 TRDALESLLAKLDKADRALCFTSGM-AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~~~i~~~sG~-~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------ 127 (301)
...++++.+++++|+++++++++|+ .|+ .++.+++++||+|++++++|.++.. .+...|+++++++..
T Consensus 196 ~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~----~l~lsGa~pv~v~~~~~~~gi 271 (715)
T 3n75_A 196 PHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH----LMMMSDVTPIYFRPTRNAYGI 271 (715)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH----HHHHSCCEEEEECCCBCTTCC
T ss_pred HHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH----HHHHcCCEEEEEecccccccc
Confidence 3899999999999999999999996 777 4778899999999999999999873 455678888888743
Q ss_pred ---------CHHHHHhhcCC--Cce---EEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc-c------Cc
Q 022194 128 ---------DLDEVASAIGP--WTK---LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-S------RP 186 (301)
Q Consensus 128 ---------d~~~l~~~l~~--~~~---~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~-~------~~ 186 (301)
|++++++++++ +++ ++++++| |++|.+.|+++|+++|++++ +++||+|+.+.. . ..
T Consensus 272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~a 348 (715)
T 3n75_A 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCG 348 (715)
T ss_dssp BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSST
T ss_pred ccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccccccc
Confidence 68999998863 334 8999999 89999999999999998764 799999986641 1 12
Q ss_pred cCCC--CcEE---EecccccccCCCCceeeEEEEcchhHHHHHHHhhhhc-CCCCCHHhHHHHHccccc-----HHHHHH
Q 022194 187 LELG--ADIV---MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-GSGLAPFDCWICLRGVKT-----MALRVE 255 (301)
Q Consensus 187 ~~~~--~di~---~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-----~~~~~~ 255 (301)
...+ +|++ +.|+||+++|+. ++|+++++++.....+....... ..+++....+.+..+.+. -.++++
T Consensus 349 l~~g~~aD~vii~~~S~hKtL~glt--qgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~ 426 (715)
T 3n75_A 349 MSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLIN 426 (715)
T ss_dssp TSSSCCTTCEEEEEECHHHHSSCCT--TCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred cccCcCCCEEEEEEecccccccCCC--CeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHH
Confidence 2222 5665 999999997764 36888887653333333333333 344455444444444322 245678
Q ss_pred HHHHHHHHHHHHHHhCC
Q 022194 256 KQQDNAQKIAEFLASHP 272 (301)
Q Consensus 256 ~~~~~~~~l~~~l~~~~ 272 (301)
+..++++++++.|++++
T Consensus 427 ~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 427 GSIERAIKFRKEIKRLR 443 (715)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88999999999998764
No 211
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.83 E-value=1.4e-19 Score=161.79 Aligned_cols=208 Identities=22% Similarity=0.193 Sum_probs=136.5
Q ss_pred HHHHHHHHHhhcCCCce-EEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhh-hcccCCcEEEEecC-----CC
Q 022194 57 RDALESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNT-----CD 128 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~-i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~-~~~~~g~~~~~~~~-----~d 128 (301)
.+.++++++++++.+.. +++++|++++. ++..++++||+|+++.+.|+++...... .....+.....++. .|
T Consensus 78 ~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 157 (420)
T 3gbx_A 78 EQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKID 157 (420)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCC
T ss_pred HHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcC
Confidence 44455788999998744 55899998885 6677899999999999999874321111 11111233333322 38
Q ss_pred HHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccc-----cCccCCCCcEEEecccccc
Q 022194 129 LDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFI 202 (301)
Q Consensus 129 ~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~di~~~S~sK~~ 202 (301)
++++++++++ ++++|++++|+|+ ...++++|+++|++||+++|+||+|+.+.. ..... ..|++++|+||++
T Consensus 158 ~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~ 234 (420)
T 3gbx_A 158 YDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKTL 234 (420)
T ss_dssp HHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGGG
T ss_pred HHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccCC
Confidence 9999999975 5899999888886 478899999999999999999999875433 22222 4799999999999
Q ss_pred cCCCCceeeEEEEcc--hhHHHHHHHhhhhcCC-CCCHHhH---H-HHHccc-ccHHHHHHHHHHHHHHHHHHHHh
Q 022194 203 AGHSDVMAGVLAVKG--ERLAKELYFLQNAEGS-GLAPFDC---W-ICLRGV-KTMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~---~-~~~~~l-~~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
+|+. +|+++.++ +.+.+.+......... +...... . +....+ +.+.+.+++..++++++.+.|++
T Consensus 235 ~g~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (420)
T 3gbx_A 235 AGPR---GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN 307 (420)
T ss_dssp CSCS---CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC---ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh
Confidence 7654 58998886 3555544433322211 2222211 1 112222 34567778888999999999987
No 212
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.83 E-value=2.5e-20 Score=169.46 Aligned_cols=253 Identities=15% Similarity=0.073 Sum_probs=161.0
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccC--CCCchHHHHHHHHHhhcC--CCceEEecchHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTR--SGNPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~--~g~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai~ 84 (301)
.++|||.++ +.++|.. +|.+..+...+.+ ...+.+.. +..+.+.++++.|+++++ .+++++++||++|+.
T Consensus 55 ~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~~~---~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~ 130 (472)
T 3hmu_A 55 EEILDAMAGLWCVNIGYG-RDELAEVAARQMR---ELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND 130 (472)
T ss_dssp CEEECTTHHHHTCTTCBC-CHHHHHHHHHHHH---HCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred CEEEECCCchhhccCCCC-CHHHHHHHHHHHH---hccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence 478999854 5779986 4444443222211 11112222 234568999999999985 447888888999986
Q ss_pred HHHh-ccC--------CCCeEEEcCCCCccHHHHHhhhc---------c-cCCcEEEEecC----C---C--------HH
Q 022194 85 AVTH-LLG--------TGEEIVAGDDLYGGTDRLLSRVT---------P-KTGVVVKRVNT----C---D--------LD 130 (301)
Q Consensus 85 ~~~~-~~~--------~g~~Vlv~~~~y~~~~~~~~~~~---------~-~~g~~~~~~~~----~---d--------~~ 130 (301)
+++. +.. ++++|++.++.||++........ . ..++.....+. . | ++
T Consensus 131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~ 210 (472)
T 3hmu_A 131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARAR 210 (472)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHH
Confidence 4433 332 46899999999998753321111 1 11333333222 1 1 67
Q ss_pred HHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccCc---cCCC--CcEEEe
Q 022194 131 EVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSRP---LELG--ADIVMH 196 (301)
Q Consensus 131 ~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~~---~~~~--~di~~~ 196 (301)
++++.+. +++++|+++.+++++|.+.+ +++|.++|++||+++|+||+|... ..+.. ...+ .|++
T Consensus 211 ~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~-- 288 (472)
T 3hmu_A 211 ELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM-- 288 (472)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--
T ss_pred HHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee--
Confidence 8888775 56788888888888888876 999999999999999999999742 22211 1123 4554
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHh--hhhcCCCCCHHhHHHHHcccccHH--HHHHHHH-HHHHHHHHHHHhC
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQ-DNAQKIAEFLASH 271 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~-~~~~~l~~~l~~~ 271 (301)
+++|+++| ++++.|++++++ .+.+.+... ....+.+.++..+++++..++.+. +..++.. ++.+++++.|+++
T Consensus 289 t~sK~l~g-g~~plG~v~~~~-~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l 366 (472)
T 3hmu_A 289 TIAKGLSS-GYAPIGGSIVCD-EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEAL 366 (472)
T ss_dssp EECGGGTT-TSSCCEEEEEEH-HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGG
T ss_pred eechhhhc-CCcceEEEEECH-HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 58899954 446789998874 455544211 222345567888888777776542 3456666 6777777777653
No 213
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.83 E-value=4.8e-20 Score=165.53 Aligned_cols=205 Identities=19% Similarity=0.200 Sum_probs=140.7
Q ss_pred HHHHHHHHHhhcC--C-CceEEecch-HHHHH-HHHhc--------cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEE
Q 022194 57 RDALESLLAKLDK--A-DRALCFTSG-MAALA-AVTHL--------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR 123 (301)
Q Consensus 57 ~~~l~~~l~~~~~--~-~~~i~~~sG-~~ai~-~~~~~--------~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~ 123 (301)
++++.+++.+..+ . ++.+++++| ++++. ++..+ +++||+|+++.|.|..+...+ +..|.+++.
T Consensus 106 r~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~----~~~g~~~~~ 181 (427)
T 2hox_A 106 EKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQT----KYFDKKGYV 181 (427)
T ss_dssp HHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHH----HHSCBTTEE
T ss_pred HHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHH----HHcCCeeee
Confidence 4445555544322 2 244555555 68886 55667 789999999999999887444 344554443
Q ss_pred ecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc-CccCCCCcEEEecccccc
Q 022194 124 VNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (301)
Q Consensus 124 ~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (301)
.. .|++.+++++++++++|++++|+||||.+.+ + ++ + ++..+.|+.+...... .....+.+++++||||.+
T Consensus 182 ~~-~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~-~l---~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~ 253 (427)
T 2hox_A 182 WA-GNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A-VI---K--GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFT 253 (427)
T ss_dssp EE-EEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C-SS---T--TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHT
T ss_pred ec-CCHHHHHHhhcCCceEEEEcCCCCCcccccH-H-HH---c--CCCEEEeecccCCCCCccccCCCceEEEEeChhcC
Confidence 33 2678888888888999999999999999998 3 32 2 5688999987532111 111256899999999999
Q ss_pred cCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccc---------------cHHHHHHHHHHHHHHHHHH
Q 022194 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---------------TMALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 203 ~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------------~~~~~~~~~~~~~~~l~~~ 267 (301)
|++|+|.|+++++++.+.+.+.........+.+...+.++...++ .+.+.++++.++.+.+.+.
T Consensus 254 -g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (427)
T 2hox_A 254 -GHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITAL 332 (427)
T ss_dssp -SCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 667899999999766777777666655555556655444333322 2345567788888899999
Q ss_pred HHhCCCc
Q 022194 268 LASHPRV 274 (301)
Q Consensus 268 l~~~~~v 274 (301)
|++++++
T Consensus 333 L~~~~g~ 339 (427)
T 2hox_A 333 LDQSDRF 339 (427)
T ss_dssp HTTSSSE
T ss_pred HHhCcCc
Confidence 9887554
No 214
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.82 E-value=6.4e-20 Score=166.04 Aligned_cols=260 Identities=16% Similarity=0.177 Sum_probs=155.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~ 85 (301)
..+|||.++ ..++|..+ |.+......+.+ ....+.+..+..+.+.+++++++++++ .+++++++||++|+.+
T Consensus 64 ~~ylD~~~~~~~~~lGh~~-p~v~~A~~~~~~--~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~ 140 (453)
T 4ffc_A 64 NSFIDLGAGIAVTTVGASH-PAVAAAIADQAT--HFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVEN 140 (453)
T ss_dssp CEEEESSHHHHTCTTCTTC-HHHHHHHHHHHH--HCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred CEEEEcCCCcccCcCCCCC-HHHHHHHHHHHH--hccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHH
Confidence 468999854 56788764 444443222211 112222222234558999999999985 3467888889999964
Q ss_pred HHhcc---CCCCeEEEcCCCCccHHHHHhhhcc----------cCCcEEEEecCC----C-------------HHHHHhh
Q 022194 86 VTHLL---GTGEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNTC----D-------------LDEVASA 135 (301)
Q Consensus 86 ~~~~~---~~g~~Vlv~~~~y~~~~~~~~~~~~----------~~g~~~~~~~~~----d-------------~~~l~~~ 135 (301)
++.++ ..+++|++.++.||+.......... .....+..++.. | .+.+++.
T Consensus 141 alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~ 220 (453)
T 4ffc_A 141 AIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQ 220 (453)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHh
Confidence 44332 3568999999999987543322211 111123333322 2 3566776
Q ss_pred cCCCceEEEEeCCCCCc-ccccc----HHHHHHHHHHcCCEEEEeCCcCCc-ccc---CccCCCCcEEEecccccccCCC
Q 022194 136 IGPWTKLVWVESPTNPR-QQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSATKFIAGHS 206 (301)
Q Consensus 136 l~~~~~~v~i~~~~np~-G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~---~~~~~~~di~~~S~sK~~~g~~ 206 (301)
+..+..++++..|.|++ |.+.+ +++|+++|++||+++|+||+|... ... .....+....+.+++|++++
T Consensus 221 i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~-- 298 (453)
T 4ffc_A 221 IGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAG-- 298 (453)
T ss_dssp TCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGT--
T ss_pred cCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcC--
Confidence 66444444444455554 55554 999999999999999999998732 221 11122444445678999954
Q ss_pred CceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHH----hCCCcce
Q 022194 207 DVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA----SHPRVKK 276 (301)
Q Consensus 207 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~----~~~~v~~ 276 (301)
|++.|++++++ .+.+.+.......++..++..+++++..++.+. +..++..++.+++++.|+ +++.+..
T Consensus 299 G~~~G~~~~~~-~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 373 (453)
T 4ffc_A 299 GMPLSAVTGRA-ELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGE 373 (453)
T ss_dssp TSSCEEEEEEH-HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEE
T ss_pred CcCeEEEEECH-HHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 68899998864 455544333444456667777777776665432 234555555555555554 4554433
No 215
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.81 E-value=3.5e-19 Score=162.36 Aligned_cols=215 Identities=14% Similarity=0.126 Sum_probs=152.8
Q ss_pred HHHHHHHHHhhcCCCc------------eEEecchHHHHH-HHHhcc-------------------CCCCeEEEcCCCCc
Q 022194 57 RDALESLLAKLDKADR------------ALCFTSGMAALA-AVTHLL-------------------GTGEEIVAGDDLYG 104 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~------------~i~~~sG~~ai~-~~~~~~-------------------~~g~~Vlv~~~~y~ 104 (301)
.+++.+++++++|.+. .+++++||+++. ++.... .+++.|++++..|.
T Consensus 120 E~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~ 199 (481)
T 4e1o_A 120 EMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHS 199 (481)
T ss_dssp HHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCH
T ss_pred HHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchH
Confidence 5566677888888763 477888897763 443321 15678999999999
Q ss_pred cHHHHHhhhcccCCcEEEEecCC-----CHHHHHhhcCCC------ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 022194 105 GTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 105 ~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~------~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li 173 (301)
++.+. +...|.+++.++.+ |+++|+++++++ +.+|+++.++|++|.+.|+++|+++|++||+|++
T Consensus 200 s~~~~----~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lh 275 (481)
T 4e1o_A 200 SVEKA----GLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLH 275 (481)
T ss_dssp HHHHH----HHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHH----HHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEE
Confidence 88744 34568889888865 899999998643 6788889999999999999999999999999999
Q ss_pred EeCCcCCccccCc----cCCC---CcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhh-hh---------------
Q 022194 174 VDNSIMSPVLSRP----LELG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NA--------------- 230 (301)
Q Consensus 174 ~D~~~~~~~~~~~----~~~~---~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~-~~--------------- 230 (301)
+|++|+.+....+ ...| +|.++.++||++++|.| .|+++.+++.......... ..
T Consensus 276 vDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 353 (481)
T 4e1o_A 276 IDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD--CTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHW 353 (481)
T ss_dssp EECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGG
T ss_pred eehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc--eEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccc
Confidence 9999987654221 1123 59999999999988877 4777777665433111000 00
Q ss_pred ---cCCCCCHHhHHHHHcc--cccHHHHHHHHHHHHHHHHHHHHhCCCcceE
Q 022194 231 ---EGSGLAPFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (301)
Q Consensus 231 ---~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v 277 (301)
.+........++.+.. .+.+.+.+++..++++++.+.|++.++++.+
T Consensus 354 ~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 405 (481)
T 4e1o_A 354 QIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIP 405 (481)
T ss_dssp SSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECC
T ss_pred cccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 0001123334444443 3446778889999999999999998776543
No 216
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.80 E-value=3.8e-18 Score=152.17 Aligned_cols=221 Identities=14% Similarity=0.072 Sum_probs=141.2
Q ss_pred CccccCC-CCch-HHHHHHHHHhhcCCC---ceEEecchHHHHH-H---H-HhccCCCCeEEEcCCCCccHHHHHhhhcc
Q 022194 46 PYDYTRS-GNPT-RDALESLLAKLDKAD---RALCFTSGMAALA-A---V-THLLGTGEEIVAGDDLYGGTDRLLSRVTP 115 (301)
Q Consensus 46 ~~~y~~~-g~~~-~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~---~-~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~ 115 (301)
...|.+. |.|. ++++.+.+-...... ..+-+.+||.|+. + + ..+++|||+|++++|.|..+. .+++
T Consensus 80 ~~~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~----~i~~ 155 (420)
T 4h51_A 80 DYEYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHY----GVVK 155 (420)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHH----HHHH
T ss_pred CCCCCCcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHH----HHHH
Confidence 3457777 8877 666666553222121 2333566676653 2 2 224679999999999999997 4455
Q ss_pred cCCcE-EEEec---CC----CHHHHHhhc---CCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 116 KTGVV-VKRVN---TC----DLDEVASAI---GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 116 ~~g~~-~~~~~---~~----d~~~l~~~l---~~~~~~v~i~~~~np~G~~~~---l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
..|.+ +...+ .+ |.+.+++.+ .++++++++++||||||...+ +++|+++|+++++++|+|++|...
T Consensus 156 ~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~ 235 (420)
T 4h51_A 156 AAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGY 235 (420)
T ss_dssp HTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTT
T ss_pred HcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhh
Confidence 56654 32222 11 566666555 367788888999999999974 888999999999999999999765
Q ss_pred cccCc-----------cCCCCcEEEecccccccCCCCceeeEEEEcchhHHH------HHHHhhhhcCCCCCHHhHHHHH
Q 022194 182 VLSRP-----------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK------ELYFLQNAEGSGLAPFDCWICL 244 (301)
Q Consensus 182 ~~~~~-----------~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
.+... ......+++.||||.| +.+|.|.|++++..+.... .+...........+...+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~ 314 (420)
T 4h51_A 236 ASGSLDTDAYAARLFARRGIEVLLAQSFSKNM-GLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAH 314 (420)
T ss_dssp TTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred ccCCcccchHHHHhHHhhCceEEEEecccccc-ccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHH
Confidence 54321 1223578999999999 6678999999886543322 1222222222333444433332
Q ss_pred ccc----------ccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 245 RGV----------KTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 245 ~~l----------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
..+ +.+...++++.++++.+.+.|++.
T Consensus 315 ~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 315 LILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222 224455667777788888888774
No 217
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.80 E-value=4.2e-19 Score=161.50 Aligned_cols=215 Identities=14% Similarity=0.148 Sum_probs=149.6
Q ss_pred HHHHHHHHHhhcCCC-----------ceEEecchHHHHH-HHHhcc-------------------CCCCeEEEcCCCCcc
Q 022194 57 RDALESLLAKLDKAD-----------RALCFTSGMAALA-AVTHLL-------------------GTGEEIVAGDDLYGG 105 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~-----------~~i~~~sG~~ai~-~~~~~~-------------------~~g~~Vlv~~~~y~~ 105 (301)
.+++.+++++++|.+ ..+++++||+++. ++.... .+++.|+++...|.+
T Consensus 115 E~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s 194 (475)
T 3k40_A 115 EVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSS 194 (475)
T ss_dssp HHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHH
T ss_pred HHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHH
Confidence 445667788888876 3678888897763 443321 134689999999998
Q ss_pred HHHHHhhhcccCCcEEEEecCC----CHHHHHhhcCCC------ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 022194 106 TDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~~~------~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D 175 (301)
+. +.+...|++++.++.+ |++++++++.+. +.+|+++.++|++|.+.|+++|+++|++||+|+++|
T Consensus 195 ~~----~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD 270 (475)
T 3k40_A 195 VE----RAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVD 270 (475)
T ss_dssp HH----HHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEE
T ss_pred HH----HHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEe
Confidence 86 4444578899999874 899999998743 677888999999999999999999999999999999
Q ss_pred CCcCCccccCc----cCC---CCcEEEecccccccCCCCceeeEEEEcchhHH-HHHHH----hhhhc-C----------
Q 022194 176 NSIMSPVLSRP----LEL---GADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYF----LQNAE-G---------- 232 (301)
Q Consensus 176 ~~~~~~~~~~~----~~~---~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~-~~~~~----~~~~~-~---------- 232 (301)
++|+.+....+ ... .+|.++.|+||++++|.| +|+++.+++... +.+.. +.... +
T Consensus 271 ~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 348 (475)
T 3k40_A 271 AAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFD--CSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQI 348 (475)
T ss_dssp CTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESSGGGC---------------------------
T ss_pred HHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCc--eEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccc
Confidence 99987654221 111 369999999999988876 477777765432 21110 00000 0
Q ss_pred -CC--CCHHhHHHHHcc--cccHHHHHHHHHHHHHHHHHHHHhCCCcceE
Q 022194 233 -SG--LAPFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (301)
Q Consensus 233 -~~--~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~v 277 (301)
.+ ......+++++. .+.+.+.+++..++++++.+.|+++++++.+
T Consensus 349 ~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~ 398 (475)
T 3k40_A 349 PLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELA 398 (475)
T ss_dssp CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred cCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 00 112233433333 2346777888999999999999998776543
No 218
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.68 E-value=2.5e-21 Score=174.58 Aligned_cols=250 Identities=15% Similarity=0.089 Sum_probs=165.2
Q ss_pred ceeeecCCCCCC---CCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHH
Q 022194 11 TLLMNFSNEFDP---YGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAV 86 (301)
Q Consensus 11 ~~~~~~~~~~~~---~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~ 86 (301)
.++|||. ++.+ +|. ++|.+..+...+.+ ....+ .+..+...++++.|++++ +.+.+++++||++|+.++
T Consensus 100 ~~yiD~~-~~~~~~~lGh-~~p~V~~Av~~q~~--~~~~~---~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~A 172 (465)
T 2yky_A 100 HAYVNFL-GEYTAGLFGH-SHPVIRAAVERALA--VGLNL---STQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMA 172 (465)
Confidence 4689998 5555 775 45555554322211 11111 123456889999999998 677888999999998655
Q ss_pred Hhcc---CCCCeEEEcCCCCccHHHHHhhhcccCCc--EEEEecCCCHHHHHhhcC---CCceEEEEeCCCCCcccccc-
Q 022194 87 THLL---GTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD- 157 (301)
Q Consensus 87 ~~~~---~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~--~~~~~~~~d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~- 157 (301)
+.++ ..+++|++.++.||+.......-....|+ .+..++..|+++++++++ +++++|+++..++++|.+.+
T Consensus 173 ik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~ 252 (465)
T 2yky_A 173 LATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAE 252 (465)
Confidence 4443 45689999999999875321100012233 444555668999999987 68899999877777998766
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCcCCccccC---ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHH-----
Q 022194 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----- 226 (301)
Q Consensus 158 ---l~~l~~l~~~~~~~li~D~~~~~~~~~~---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~----- 226 (301)
+++|.++|++||+++|+||+|+ +.... ....+....+.+|+|++++ |++.|+++++++ +++.+..
T Consensus 253 ~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg~--G~piG~v~~~~~-i~~~l~~~~~g~ 328 (465)
T 2yky_A 253 RAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIGG--GMSFGAFGGRRD-LMERFDPARDGA 328 (465)
Confidence 9999999999999999999999 53221 1122444556689999964 678899988754 4454433
Q ss_pred hhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHHHHhC
Q 022194 227 LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 271 (301)
.....+.+.++..+++++..++.+. ...+++.++.+++++.|++.
T Consensus 329 ~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 2yky_A 329 FAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRI 375 (465)
Confidence 1222334456666666666666542 34566666666777766553
No 219
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.80 E-value=1.3e-18 Score=158.03 Aligned_cols=209 Identities=17% Similarity=0.164 Sum_probs=136.8
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccC----CCCe---EEEcCCCCccHHHHHhhhcccCCcEEEEecC
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLG----TGEE---IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~----~g~~---Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~ 126 (301)
+...+++++++++++.+++++++||++|+. ++..+++ +||+ |+++.+.|..+. ..+...|.+++.++.
T Consensus 76 ~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~----~~~~~~g~~~~~~~~ 151 (467)
T 1ax4_A 76 RNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTA----AHVELNGCKAINIVT 151 (467)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHH----HHHHHTTCEEEECBC
T ss_pred ccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhh----HHHhccCCceecccc
Confidence 457899999999999988888899999985 5666677 8998 998844444433 333445666654421
Q ss_pred ---------------CCHHHHHhhcCC----CceEEEEeCCCCCc-cccc---cHHHHHHHHHHcCCEEEEeCCcCC---
Q 022194 127 ---------------CDLDEVASAIGP----WTKLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDNSIMS--- 180 (301)
Q Consensus 127 ---------------~d~~~l~~~l~~----~~~~v~i~~~~np~-G~~~---~l~~l~~l~~~~~~~li~D~~~~~--- 180 (301)
.|++++++++++ ++++|++++++||+ |.+. ++++|+++|++||+++|+|+++..
T Consensus 152 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~ 231 (467)
T 1ax4_A 152 EKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENA 231 (467)
T ss_dssp GGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH
T ss_pred cccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcc
Confidence 278999998873 68999999999999 7765 478999999999999999998654
Q ss_pred --------ccccCc-cC------CCCcEEEecccccccCCCCceeeEEEEcch-hHHHHHHHhhhh-cC----CCCCHHh
Q 022194 181 --------PVLSRP-LE------LGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYFLQNA-EG----SGLAPFD 239 (301)
Q Consensus 181 --------~~~~~~-~~------~~~di~~~S~sK~~~g~~g~~~g~~~~~~~-~~~~~~~~~~~~-~~----~~~~~~~ 239 (301)
+..... .. ...|+++.|+||+++.+ .+|+++.+++ .+.+.+...... .+ ...+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 308 (467)
T 1ax4_A 232 YFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN---IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRD 308 (467)
T ss_dssp HHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS---SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHH
T ss_pred hhccccccccCCCchhhhhhhhccccceEEEeccccCCCC---cceEEEeCCHHHHHHHHHhhccccccccccCCccchH
Confidence 111111 11 23688899999998543 2577777744 555554433221 11 1122221
Q ss_pred HHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 240 CWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 240 ~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
..++..+++.. .+..++..++.+++.+.|++
T Consensus 309 ~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 309 MAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE 341 (467)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 12111122211 22444555677788888876
No 220
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.79 E-value=2.8e-19 Score=157.02 Aligned_cols=200 Identities=14% Similarity=0.055 Sum_probs=138.2
Q ss_pred HHHHHHHHHhhcCCC---ceEEec-chHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 57 RDALESLLAKLDKAD---RALCFT-SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~-sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
++++++++++++|.+ ++++++ +|++++. ++..++++||+|++.++.+.+.. +...++..| +++.++.+
T Consensus 51 ~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~~ 127 (362)
T 2c0r_A 51 HNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEASN 127 (362)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGGT
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEecccccc
Confidence 788999999999986 345664 5578886 66778899999998877655432 123444456 66666532
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEeccccc
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKF 201 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~-~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~ 201 (301)
|.+++ .+++++++|++++++||||.. .|+++| +|+++++|++|+.+....... ..|+++.|+||+
T Consensus 128 ~~~~~~~~~~--~i~~~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-~~d~~~~s~~K~ 198 (362)
T 2c0r_A 128 YMTLPKLQEI--QLQDNAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-QFGLVYAGAQKN 198 (362)
T ss_dssp TCSCCCGGGC--CCCTTEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-GCSEEEEETTTT
T ss_pred cccCCCHHHc--ccCCCcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchh-HCcEEEEecccc
Confidence 33333 267789999999999999996 778777 899999999999876542222 248999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHH------------hhhhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYF------------LQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQK 263 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~ 263 (301)
+ ||+| .|+++++++.+ +.+.. .......+.+....+++..+++. +.+.+++..+++++
T Consensus 199 ~-g~~G--~G~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~ 274 (362)
T 2c0r_A 199 L-GPSG--VTVVIVREDLV-AESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASL 274 (362)
T ss_dssp T-CCSS--CEEEEEEGGGS-SSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred c-cCcC--cEEEEEcHHHH-hhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9 5777 58998876543 22111 01122345555555555444432 45667788888889
Q ss_pred HHHHHHhCC
Q 022194 264 IAEFLASHP 272 (301)
Q Consensus 264 l~~~l~~~~ 272 (301)
+.+.|++++
T Consensus 275 l~~~L~~~~ 283 (362)
T 2c0r_A 275 IYDAIDQSG 283 (362)
T ss_dssp HHHHHHTST
T ss_pred HHHHHHHcC
Confidence 999998875
No 221
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.77 E-value=4.1e-19 Score=155.64 Aligned_cols=202 Identities=13% Similarity=0.116 Sum_probs=136.3
Q ss_pred HHHHHHHHHhhcCCC---ceEEecch-HHHHH-HHHhccCC---CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKAD---RALCFTSG-MAALA-AVTHLLGT---GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~~~sG-~~ai~-~~~~~~~~---g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.+++++++++++|.+ ++++++++ ++|+. ++..++.+ ||.|+++.+.|... ..++..| +++.++.+
T Consensus 50 ~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-----~~~~~~g-~~~~v~~~~ 123 (360)
T 1w23_A 50 HEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-----KEAKLLG-ETHIAASTK 123 (360)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-----HHHHTTS-EEEEEEECG
T ss_pred HHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-----HHHHHhC-CeEEeeccc
Confidence 789999999999876 34455555 78886 55666654 55677665555432 2345567 88877753
Q ss_pred -----CHHHHHh-hcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEeccccc
Q 022194 128 -----DLDEVAS-AIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKF 201 (301)
Q Consensus 128 -----d~~~l~~-~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~ 201 (301)
|++++++ ++++++++|++++|+||||.+.+ +|. +++|+++|+|++|+.+....... ..|++++|+||+
T Consensus 124 ~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~i~---~~~~~~li~D~a~~~~~~~~~~~-~~di~~~s~sK~ 197 (360)
T 1w23_A 124 ANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ--NFP---EINHAPLIADMSSDILSRPLKVN-QFGMIYAGAQKN 197 (360)
T ss_dssp GGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--SCC---CCCSSCEEEECTTTTTSSCCCGG-GCSEEEEETTTT
T ss_pred ccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc--ccc---ccCCceEEEechhhcCCCCcCcc-cCCEEEEEcccc
Confidence 6678888 88888999999999999999976 333 38999999999998776442222 238999999999
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHHhh-----------h-hcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHH
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYFLQ-----------N-AEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQK 263 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~ 263 (301)
+ |++| .|+++++++.+ +.+.... . ....+.+....+++..+++. +.+.++++.+++++
T Consensus 198 ~-~~~G--~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 273 (360)
T 1w23_A 198 L-GPSG--VTVVIVKKDLL-NTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKI 273 (360)
T ss_dssp T-SCTT--CEEEEEEHHHH-CSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred c-CCCC--cEEEEEcHHHH-hhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 9 5666 58888875432 3221110 0 11123344443333333332 45567788888899
Q ss_pred HHHHHHhCCCc
Q 022194 264 IAEFLASHPRV 274 (301)
Q Consensus 264 l~~~l~~~~~v 274 (301)
+.+.|++++++
T Consensus 274 l~~~L~~~~~~ 284 (360)
T 1w23_A 274 IYDTIDESNGF 284 (360)
T ss_dssp HHHHHHTTTTS
T ss_pred HHHHHHHccCc
Confidence 99999887643
No 222
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.77 E-value=9e-18 Score=151.28 Aligned_cols=209 Identities=21% Similarity=0.217 Sum_probs=142.4
Q ss_pred HHHHHHHHHhhcCCCc--eEEecchHHH---HHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 57 RDALESLLAKLDKADR--ALCFTSGMAA---LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~--~i~~~sG~~a---i~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.+++++.+++++|.+. ++++++|+.+ +..+. .+++||+|+++++.|+++...+...++..|++++.++..
T Consensus 110 ~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~-~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~ 188 (438)
T 1wyu_A 110 TFEYQTMIAELAGLEIANASMYDGATALAEGVLLAL-RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRT 188 (438)
T ss_dssp HHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHH-HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBC
T ss_pred HHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHH-hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCcc
Confidence 7889999999999873 3566666633 32222 357899999999999999877766667789999999853
Q ss_pred CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC-cCCccccCccCCCCcEEEecccc-----c
Q 022194 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATK-----F 201 (301)
Q Consensus 128 d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~-~~~~~~~~~~~~~~di~~~S~sK-----~ 201 (301)
|+++ +++++++|++++| ||+|.+.|+++|+++|+++|+++++|.. ++.+....+...++|++++|.+| +
T Consensus 189 d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~ 263 (438)
T 1wyu_A 189 PLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMG 263 (438)
T ss_dssp CCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCG
T ss_pred CHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCcc
Confidence 2333 6678999999999 9999999999999999999999997743 44444444455689999999444 4
Q ss_pred ccCCCCceeeEEEEcchhHHHHHHH-------------------------hhh-hcCCCC---CHHhHH-HH--Hccc--
Q 022194 202 IAGHSDVMAGVLAVKGERLAKELYF-------------------------LQN-AEGSGL---APFDCW-IC--LRGV-- 247 (301)
Q Consensus 202 ~~g~~g~~~g~~~~~~~~~~~~~~~-------------------------~~~-~~~~~~---~~~~~~-~~--~~~l-- 247 (301)
++|| ++|+++++++.. +.+.. ... ..+... +...+. +. +..+
T Consensus 264 ~~Gp---~~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~ 339 (438)
T 1wyu_A 264 FGGP---HFGFLATKKAFV-RQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGP 339 (438)
T ss_dssp GGCS---CCEEEEECGGGG-GGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHH
T ss_pred CCCC---CeeEEEEcHHHH-HhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCH
Confidence 5454 468998876533 32210 010 111111 222221 11 2222
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 022194 248 KTMALRVEKQQDNAQKIAEFLASHPRVK 275 (301)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 275 (301)
+.+.+..++..++++++.+.|++.+++.
T Consensus 340 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~ 367 (438)
T 1wyu_A 340 EGLREVALKSVEMAHKLHALLLEVPGVR 367 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 1245566778888899999999887664
No 223
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.77 E-value=1.6e-18 Score=156.67 Aligned_cols=247 Identities=12% Similarity=0.050 Sum_probs=151.1
Q ss_pred ceeeecCCCC--CCCCccccCeee-c-ceee---cCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchH
Q 022194 11 TLLMNFSNEF--DPYGALSTPLYQ-T-ATFK---QPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGM 80 (301)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~~p~~~-~-~~~~---~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~ 80 (301)
..++||.++. ..+|.. +|.+. . .... +.+ ....+. ..+..+...++++.+++.++ .+++++++||+
T Consensus 54 ~~ylD~~~~~~~~~lG~~-~p~v~~~~A~~~~~~~~~--~~~~~~-~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gs 129 (449)
T 2cjg_A 54 RRYLDMFTFVASSALGMN-PPALVDDREFHAELMQAA--LNKPSN-SDVYSVAMARFVETFARVLGDPALPHLFFVEGGA 129 (449)
T ss_dssp CEEEESSHHHHTCSSCBS-CHHHHTCHHHHHHHHHHH--TCCCCT-TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHH
T ss_pred cEEEEccCCccccCCCCC-CHHHHHHHHHHHHHHHHH--hcCCCC-cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchH
Confidence 3688885222 357765 45454 3 3222 111 111111 22344558899999999984 45677888889
Q ss_pred HHHHHHHhc----cC-----------CCCeEEEcCCCCccHHHHHhhhc----------ccCCcEEEEecCCC--H----
Q 022194 81 AALAAVTHL----LG-----------TGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNTCD--L---- 129 (301)
Q Consensus 81 ~ai~~~~~~----~~-----------~g~~Vlv~~~~y~~~~~~~~~~~----------~~~g~~~~~~~~~d--~---- 129 (301)
+|+..++.+ .. +||+|++.+|.||++........ ......+..++.+| .
T Consensus 130 eA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 209 (449)
T 2cjg_A 130 LAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPA 209 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccc
Confidence 998643322 12 28999999999998642111111 11112556666555 3
Q ss_pred ---------HHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-cccCc---c--
Q 022194 130 ---------DEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLSRP---L-- 187 (301)
Q Consensus 130 ---------~~l~~~l~---~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~~~~~---~-- 187 (301)
++++++++ +++++|+++.++|++|...+ +++|.++|++||+++|+||+|+.. ..+.. .
T Consensus 210 ~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~ 289 (449)
T 2cjg_A 210 MAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQL 289 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHH
T ss_pred cchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeeccc
Confidence 33777774 67888888877889997665 999999999999999999999832 22111 1
Q ss_pred CCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHH-----HhhhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHH
Q 022194 188 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-----FLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDN 260 (301)
Q Consensus 188 ~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~ 260 (301)
....|+ .|+||++ | .|++++++ .+.+.+. ......+...++..+.++..+++.+. +..++..++
T Consensus 290 ~~~~di--~t~sK~l--~----iG~~~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~ 360 (449)
T 2cjg_A 290 DVAPDI--VAFGKKT--Q----VCGVMAGR-RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQH 360 (449)
T ss_dssp TCCCSE--EEECGGG--S----SEEEEECG-GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred CCCceE--EEecCcc--c----EEEEEECH-HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 123454 4789998 3 57777775 4444211 11222334556777777766666442 345667777
Q ss_pred HHHHHHHHHh
Q 022194 261 AQKIAEFLAS 270 (301)
Q Consensus 261 ~~~l~~~l~~ 270 (301)
.+++.+.|++
T Consensus 361 ~~~l~~~L~~ 370 (449)
T 2cjg_A 361 GKYLRARLDE 370 (449)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7778887764
No 224
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.75 E-value=9.8e-18 Score=149.12 Aligned_cols=209 Identities=11% Similarity=0.053 Sum_probs=132.2
Q ss_pred hHHHHHHHHHhhcCCC---ceEE-ecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCC
Q 022194 56 TRDALESLLAKLDKAD---RALC-FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCD 128 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~---~~i~-~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d 128 (301)
..+++++++++++|.+ ++++ ++||++++. ++..++++| .+.+....| +.. +...+... |.+++.++.++
T Consensus 79 ~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~-~~~--~~~~~~~~~~g~~~~~v~~~~ 154 (398)
T 2fyf_A 79 LVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEF-SAK--FASAVSKNPFVGEPIIITSDP 154 (398)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHH-HHH--HHHHHHHCTTSCCCEEEECCT
T ss_pred HHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHH-HHH--HHHHHHHhCCCCceEEEecCC
Confidence 3788999999999986 3444 566679986 566677886 233333333 211 11112222 55666665431
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccCCCCc
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDV 208 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~ 208 (301)
-......+.+++++|++++++||||.+.|+++|.++ +|+++|+|++|+.+....... +.|+++.|+||++++++|
T Consensus 155 g~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~gg- 229 (398)
T 2fyf_A 155 GSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDGG- 229 (398)
T ss_dssp TCCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCSS-
T ss_pred CCCCCccccCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCCc-
Confidence 111111356789999999999999999999888887 899999999998776543222 479999999999965433
Q ss_pred eeeEEEEcchhHHHHHHHhh---------------------hhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHH
Q 022194 209 MAGVLAVKGERLAKELYFLQ---------------------NAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNA 261 (301)
Q Consensus 209 ~~g~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~ 261 (301)
.|+++.+++ +.+.+.... .....+.+....+++..+++. +.+.+++..+++
T Consensus 230 -~g~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 307 (398)
T 2fyf_A 230 -LWLAIMSPA-ALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSS 307 (398)
T ss_dssp -EEEEEECHH-HHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred -eEEEEECHH-HHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 688888754 434332110 011123444444444334332 455677788888
Q ss_pred HHHHHHHHhCCCcc
Q 022194 262 QKIAEFLASHPRVK 275 (301)
Q Consensus 262 ~~l~~~l~~~~~v~ 275 (301)
+++.+.|++++++.
T Consensus 308 ~~l~~~L~~~~g~~ 321 (398)
T 2fyf_A 308 QRLYSWAQERPYTT 321 (398)
T ss_dssp HHHHHHHHHSTTEE
T ss_pred HHHHHHHHHcCCce
Confidence 89999998876653
No 225
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.73 E-value=4.3e-17 Score=144.90 Aligned_cols=210 Identities=12% Similarity=0.053 Sum_probs=141.6
Q ss_pred HHHHHHHHHhhcCCCc--e-EEecchH-HHHHHHHhccCC----CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-
Q 022194 57 RDALESLLAKLDKADR--A-LCFTSGM-AALAAVTHLLGT----GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~--~-i~~~sG~-~ai~~~~~~~~~----g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~- 127 (301)
.+.+..++.+.+|.++ . ++++++| .++.++++.+++ ++.|++++.+|.++. +.+...|+..+++++.
T Consensus 100 e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~----kAl~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 100 TNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF----KSMVTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH----HHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHH----HHHHHcCCeeEEEEeee
Confidence 4567777888888873 3 6666666 444566665554 899999999998886 6667788888888762
Q ss_pred -------CHHHHHhhcCC---CceEEEEeCCC-CCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc------CccC-C
Q 022194 128 -------DLDEVASAIGP---WTKLVWVESPT-NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLE-L 189 (301)
Q Consensus 128 -------d~~~l~~~l~~---~~~~v~i~~~~-np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~------~~~~-~ 189 (301)
|++.+++++++ +..++++.+|+ +.+|.+.|+++|+++|++||+|++||++|+..... .... .
T Consensus 176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~ 255 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVG 255 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHS
T ss_pred cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhccc
Confidence 89999999863 23444444444 44668899999999999999999999999964322 1112 2
Q ss_pred CCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHc--ccccHHHHHHHHHHHHHHHHHH
Q 022194 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEF 267 (301)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~ 267 (301)
++|+++.|.||++..|-+ ++++..+++...+...........+.+....|..+. +.+.+.+.+++..++++++++.
T Consensus 256 ~AD~~v~S~HK~l~a~~~--~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~ 333 (450)
T 3bc8_A 256 RIDAFVQSLDKNFMVPVG--GAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQ 333 (450)
T ss_dssp CCCEEEEEHHHHHSCCSS--CEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCccCCCchhc--cEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999987754 677777766655544222110011222233333322 2233555566668888889998
Q ss_pred HHhCC
Q 022194 268 LASHP 272 (301)
Q Consensus 268 l~~~~ 272 (301)
|++++
T Consensus 334 l~~~~ 338 (450)
T 3bc8_A 334 LKKLA 338 (450)
T ss_dssp HHHHH
T ss_pred HHhhH
Confidence 88766
No 226
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.72 E-value=1.2e-16 Score=145.02 Aligned_cols=210 Identities=17% Similarity=0.140 Sum_probs=129.5
Q ss_pred chHHHHHHHHHhhcCCCceEEecchHHHHH-HHHhccCC-----C----CeEEEcCCCCccHHHHHhhhcccCCcEEEEe
Q 022194 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGT-----G----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (301)
Q Consensus 55 ~~~~~l~~~l~~~~~~~~~i~~~sG~~ai~-~~~~~~~~-----g----~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~ 124 (301)
+...+++++++++++.+++++++||++|+. ++..+.++ | |+|++. +.|..... ......+..+...
T Consensus 74 ~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~---~~~~~~~~~~~~~ 149 (467)
T 2oqx_A 74 RSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQ---GHSQINGCTVRNV 149 (467)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHH---HHHHHTTCEEEEC
T ss_pred chhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccch---hhhhccCcceeec
Confidence 457899999999999988889999998875 55556667 8 888876 43432211 1111122222211
Q ss_pred ------c------C---CCHHHHHhhcC----CCceEEEEeCCCCCc-cccc---cHHHHHHHHHHcCCEEEEeCCcCC-
Q 022194 125 ------N------T---CDLDEVASAIG----PWTKLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDNSIMS- 180 (301)
Q Consensus 125 ------~------~---~d~~~l~~~l~----~~~~~v~i~~~~np~-G~~~---~l~~l~~l~~~~~~~li~D~~~~~- 180 (301)
+ . .|+++++++++ +++++|++++++||+ |.+. ++++|+++|++||+++|+|+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e 229 (467)
T 2oqx_A 150 YIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAE 229 (467)
T ss_dssp BCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHH
T ss_pred cccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhh
Confidence 1 1 27899999987 378999999999998 6664 488999999999999999977644
Q ss_pred cc----------ccC-ccC------CCCcEEEecccccccCCCCceeeEEEEcch---hHHHHHHHhhh-hcC----CCC
Q 022194 181 PV----------LSR-PLE------LGADIVMHSATKFIAGHSDVMAGVLAVKGE---RLAKELYFLQN-AEG----SGL 235 (301)
Q Consensus 181 ~~----------~~~-~~~------~~~di~~~S~sK~~~g~~g~~~g~~~~~~~---~~~~~~~~~~~-~~~----~~~ 235 (301)
+. .+. ... ...|+++.|+||+++.| .+|+++++++ .....+..... ..+ ...
T Consensus 230 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (467)
T 2oqx_A 230 NAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGL 306 (467)
T ss_dssp HHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCC
T ss_pred hhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecChhHHHHHHHHHHhhhccCCcccccch
Confidence 11 111 111 23678899999999544 2578877765 23333332221 111 112
Q ss_pred CHHhHHHHHccccc-H-HHHHHHHHHHHHHHHHHHHhC
Q 022194 236 APFDCWICLRGVKT-M-ALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 236 ~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+.....++..+++. + .+..++..++.+++.+.|++.
T Consensus 307 ~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (467)
T 2oqx_A 307 EGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI 344 (467)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 22222222222121 1 234455667788889999876
No 227
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.71 E-value=1.3e-17 Score=151.48 Aligned_cols=246 Identities=13% Similarity=0.095 Sum_probs=144.9
Q ss_pred ceeeecCCCCC---CCCccccCeeecceeecCCCCCCCCccc-cCCCC----chHHHHHHHHHhhc--CCCceEEecchH
Q 022194 11 TLLMNFSNEFD---PYGALSTPLYQTATFKQPSATENGPYDY-TRSGN----PTRDALESLLAKLD--KADRALCFTSGM 80 (301)
Q Consensus 11 ~~~~~~~~~~~---~~g~~~~p~~~~~~~~~~~~~~~~~~~y-~~~g~----~~~~~l~~~l~~~~--~~~~~i~~~sG~ 80 (301)
.++|||. ++. .+|.. +|.+..+...+... ..+.+ +.++. +..+++++.|++++ +.+++++++||+
T Consensus 63 ~~ylD~~-~g~~~~~lGh~-~p~v~~A~~~~~~~---~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGs 137 (472)
T 1ohv_A 63 NRMLDLY-SQISSIPIGYS-HPALVKLVQQPQNV---STFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGS 137 (472)
T ss_dssp CEEEESS-HHHHTCSSCBT-CHHHHHHHHCGGGH---HHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHH
T ss_pred CEEEECC-CCHhhcccCCC-CHHHHHHHHHHHhh---cccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCch
Confidence 4689997 443 47874 55454443222110 00011 11222 23666666677766 566888999999
Q ss_pred HHHHHHHhcc--------C------------------CC---CeEEEcCCCCccHHHHHhhhcc-----cCCc-----EE
Q 022194 81 AALAAVTHLL--------G------------------TG---EEIVAGDDLYGGTDRLLSRVTP-----KTGV-----VV 121 (301)
Q Consensus 81 ~ai~~~~~~~--------~------------------~g---~~Vlv~~~~y~~~~~~~~~~~~-----~~g~-----~~ 121 (301)
+|+.+++.++ + || ++|++.++.||++......... ..+. ..
T Consensus 138 eA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (472)
T 1ohv_A 138 CSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPI 217 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCE
T ss_pred hHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcc
Confidence 9986443332 1 35 8999999999997543322211 1111 11
Q ss_pred EEecC-----------------CCHHHHHhhcCC------CceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEE
Q 022194 122 KRVNT-----------------CDLDEVASAIGP------WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 122 ~~~~~-----------------~d~~~l~~~l~~------~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~ 174 (301)
..++. .|++++++++++ ++++|++++.+|++|.+.+ +++|.++|++||+++|+
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 297 (472)
T 1ohv_A 218 APFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV 297 (472)
T ss_dssp ECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 12210 147788888865 7899999988889998876 99999999999999999
Q ss_pred eCCcCC-cccc---CccCCCCc--EEEeccccc-ccCCCCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHccc
Q 022194 175 DNSIMS-PVLS---RPLELGAD--IVMHSATKF-IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (301)
Q Consensus 175 D~~~~~-~~~~---~~~~~~~d--i~~~S~sK~-~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (301)
||+|+. +..+ .....+.+ +.+.||+|+ ++ +|+++ + +.+.. +.......+...++..++++..++
T Consensus 298 DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~------GG~~~-~-~~~~~-~~~~~~~~T~~~~~~~~aaa~aal 368 (472)
T 1ohv_A 298 DEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMT------GGFFH-K-EEFRP-NAPYRIFNTWLGDPSKNLLLAEVI 368 (472)
T ss_dssp ECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSS------EEEEE-C-GGGSC-SSSSSSCCSSSSCHHHHHHHHHHH
T ss_pred eCcccCCCCCCCchhccccCCCCCCCEEEEcccccc------CCccC-c-hhhcc-cccccccCccCccHHHHHHHHHHH
Confidence 999973 3221 11223422 334578999 53 25555 4 33321 111112223345677777766666
Q ss_pred ccHH--HHHHHHHHHHHHHHHHHHh
Q 022194 248 KTMA--LRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 248 ~~~~--~~~~~~~~~~~~l~~~l~~ 270 (301)
+.+. +..+++.++.+++.+.|++
T Consensus 369 ~~~~~~~~~~~~~~~~~~l~~~L~~ 393 (472)
T 1ohv_A 369 NIIKREDLLSNAAHAGKVLLTGLLD 393 (472)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5442 3456666677777777764
No 228
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.70 E-value=1.3e-16 Score=140.31 Aligned_cols=201 Identities=10% Similarity=0.061 Sum_probs=135.6
Q ss_pred HHHHhhcCCCc---eEEecchHHH-HHHHHhccCC----CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------
Q 022194 62 SLLAKLDKADR---ALCFTSGMAA-LAAVTHLLGT----GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (301)
Q Consensus 62 ~~l~~~~~~~~---~i~~~sG~~a-i~~~~~~~~~----g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------ 127 (301)
++|+.. |.+. .++++++|.+ +.++++.+++ +|+|++++.+|.+.. ..+...|+.++++++.
T Consensus 124 d~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~----kAliL~Gl~Pv~V~p~~d~~~~ 198 (501)
T 3hl2_A 124 DIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF----KSMITAGFEPVVIENVLEGDEL 198 (501)
T ss_dssp HHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH----HHHHHTTCEEEEECEEEETTEE
T ss_pred HHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHH----HHHHHcCCeEEEEeeeeccccc
Confidence 444444 7663 3444444544 4577777664 499999999999887 5566788888888862
Q ss_pred --CHHHHHhhcCC---C-ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCcccc------CccCCC-CcEE
Q 022194 128 --DLDEVASAIGP---W-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLELG-ADIV 194 (301)
Q Consensus 128 --d~~~l~~~l~~---~-~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~------~~~~~~-~di~ 194 (301)
|++.+++++++ + +.+|+.+.+.|..+.+.|+++|+++|++||+++++|++|+..... .....| +|++
T Consensus 199 ~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~v 278 (501)
T 3hl2_A 199 RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAF 278 (501)
T ss_dssp EECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEE
T ss_pred CCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEE
Confidence 78999988863 2 334444455554456689999999999999999999999865421 123457 9999
Q ss_pred EecccccccCCCCceeeEEEEcchhHHHHHHHhhhhcCC--CCCHHhHHHHHc--ccccHHHHHHHHHHHHHHHHHHHHh
Q 022194 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--GLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 195 ~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~ 270 (301)
+.|.||++..|-| ++++..+++.+.+.+.. ...+. +.+....++.+. +.+.+.+.+++..++++++.+.|++
T Consensus 279 VqS~HK~llvpIG--G~ii~~~d~e~l~~~~~--~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~ 354 (501)
T 3hl2_A 279 VQSLDKNFMVPVG--GAIIAGFNDSFIQEISK--MYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKK 354 (501)
T ss_dssp EEEHHHHHCCCSS--CEEEEESCHHHHHHHHH--TSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecccccceeecC--ceEEEeCCHHHHHHHHH--hCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876633 45555777666664322 22222 222222344333 3345677888888889999999887
Q ss_pred C
Q 022194 271 H 271 (301)
Q Consensus 271 ~ 271 (301)
+
T Consensus 355 l 355 (501)
T 3hl2_A 355 L 355 (501)
T ss_dssp H
T ss_pred H
Confidence 4
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.69 E-value=8e-17 Score=144.40 Aligned_cols=250 Identities=15% Similarity=0.122 Sum_probs=158.9
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEecchHHHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVT 87 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-~~~~~i~~~sG~~ai~~~~ 87 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ . ...+.. ..+...++.+.|++.+ +.+.+.+++||++|+...+
T Consensus 87 ~~ylD~~~g~~~~~lGH~hp~v~~Av~-~q~~--~--~~~~~~-~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~Ai 160 (454)
T 4ao9_A 87 HRYADFIAEYTAGVYGHSAPEIRDAVI-EAMQ--G--GINLTG-HNLLEGRLARLICERFPQIEQLRFTNSGTEANLMAL 160 (454)
T ss_dssp CEEEESSGGGGTTTTCSCCHHHHHHHH-HHHH--T--CSCCCS-EESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHH
T ss_pred CEEEEccccHHhhcccCCCHHHHHHHH-HHHh--c--CCCccC-CcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHH
Confidence 378888643 3447876555444332 2211 1 111111 1233678888888877 5567888899999986444
Q ss_pred hcc---CCCCeEEEcCCCCccHHHHHhhh--cccCCcEEEEecCCCHHHHHhhcC---CCceEEEEeCCCCCcccccc--
Q 022194 88 HLL---GTGEEIVAGDDLYGGTDRLLSRV--TPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD-- 157 (301)
Q Consensus 88 ~~~---~~g~~Vlv~~~~y~~~~~~~~~~--~~~~g~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~~~np~G~~~~-- 157 (301)
++. ...++|+....+||+........ .......+..++.+|.+.+++.+. +++.+|+++......|.+.|
T Consensus 161 klAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~ 240 (454)
T 4ao9_A 161 TAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQP 240 (454)
T ss_dssp HHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCH
T ss_pred HHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCchHHHHHHHHhhcCCceEEEEeccccCCCCccCCch
Confidence 432 34578999999999864211000 112234566777789999988886 46889999988888888876
Q ss_pred --HHHHHHHHHHcCCEEEEeCCcCCccccC---ccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh----h
Q 022194 158 --IRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----Q 228 (301)
Q Consensus 158 --l~~l~~l~~~~~~~li~D~~~~~~~~~~---~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~----~ 228 (301)
+++|.++|++||+++|+||+++ |.... ....|....+.+++|.++| |+..|.+.++.+ +++.+... .
T Consensus 241 ~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~gK~lgg--G~Piga~~~~~e-i~~~~~~~~~~~~ 316 (454)
T 4ao9_A 241 DFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLGKYIGG--GMSFGAFGGRAD-VMALFDPRTGPLA 316 (454)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEEGGGGT--TSSCEEEEECHH-HHGGGCTTTCSCC
T ss_pred hhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEEeccccCC--CCcceeeeeHHH-HHHHHhhccCCcc
Confidence 9999999999999999999997 32221 1123443344469999965 356788887754 44432211 1
Q ss_pred hhcCCCCCHHhHHHHHcccccH--HHHHHHHHHHHHHHHHHHHh
Q 022194 229 NAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 270 (301)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~ 270 (301)
+..+.+.+|..+++.+..++.+ .+..+++.++.++|++.|++
T Consensus 317 h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 317 HSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNA 360 (454)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHH
Confidence 2223445677777777766554 44556777777777777764
No 230
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.68 E-value=6.6e-16 Score=135.52 Aligned_cols=207 Identities=15% Similarity=0.091 Sum_probs=146.2
Q ss_pred HHHHHHHHHhhcCCC--c-eEEec-chHHHHH-HHHhccCC--CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--
Q 022194 57 RDALESLLAKLDKAD--R-ALCFT-SGMAALA-AVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~--~-~i~~~-sG~~ai~-~~~~~~~~--g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-- 127 (301)
.++.++.++++++++ + +++++ +||++++ ++..++.+ ||+|++....+.+. .|...+++.|..++.++.+
T Consensus 60 ~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~--~~~~~a~~~G~~~~~~~~~~~ 137 (377)
T 3e77_A 60 INNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSA--KAAEEAKKFGTINIVHPKLGS 137 (377)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHH--HHHHHHTTTSEEEECSCCCSS
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHH--HHHHHHHHhCCceEEeccCCC
Confidence 678889999999986 2 45544 5689986 66677765 89998777766654 3457788889888877653
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEeccccccc
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIA 203 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK~~~ 203 (301)
++++++..+++++++|.+++..|.+|.+.|+ +|+++|+++++|.+++.+..+- ..+.+ ++++|.+|++
T Consensus 138 ~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~~- 209 (377)
T 3e77_A 138 YTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKNV- 209 (377)
T ss_dssp SCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGTT-
T ss_pred cCCCCChHHhccCCCccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEeccccc-
Confidence 4567777788899999999999999999998 4778999999999999988753 33444 6889999999
Q ss_pred CCCCceeeEEEEcchhHHH-------HH--H-Hhh-hhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHHHHH
Q 022194 204 GHSDVMAGVLAVKGERLAK-------EL--Y-FLQ-NAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAE 266 (301)
Q Consensus 204 g~~g~~~g~~~~~~~~~~~-------~~--~-~~~-~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~ 266 (301)
||+|+ |+++.+++.+.+ .+ . ... .....+.+....+.+..+++. ++...++..+.++++.+
T Consensus 210 gp~G~--g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~ 287 (377)
T 3e77_A 210 GSAGV--TVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYE 287 (377)
T ss_dssp SCTTC--EEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCcc--EEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 79985 788887654210 00 0 111 112234444445554444443 34555677788888999
Q ss_pred HHHhCCCcc
Q 022194 267 FLASHPRVK 275 (301)
Q Consensus 267 ~l~~~~~v~ 275 (301)
.|++.+++.
T Consensus 288 ~L~~~~g~~ 296 (377)
T 3e77_A 288 IIDNSQGFY 296 (377)
T ss_dssp HHHTSTTSE
T ss_pred HHHhcCCce
Confidence 998877653
No 231
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.66 E-value=6.2e-15 Score=129.20 Aligned_cols=213 Identities=19% Similarity=0.189 Sum_probs=135.8
Q ss_pred CCchHHHHH----HHHHhhcCCCce-----EEecchHHHH-HHHHhccCCCCeEEEcCCCCccHHHHHh----hhcccCC
Q 022194 53 GNPTRDALE----SLLAKLDKADRA-----LCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLS----RVTPKTG 118 (301)
Q Consensus 53 g~~~~~~l~----~~l~~~~~~~~~-----i~~~sG~~ai-~~~~~~~~~g~~Vlv~~~~y~~~~~~~~----~~~~~~g 118 (301)
|....++++ ++.+++|+++.+ +=.-||+.|. .++.++++|||+|+..+..+.++...-. ......|
T Consensus 94 Gce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg 173 (490)
T 3ou5_A 94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATS 173 (490)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------
T ss_pred CChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccc
Confidence 444455555 556788998853 5567898776 6889999999999998888777653210 0011112
Q ss_pred cEEEEec----C----CCHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC-----Ccccc
Q 022194 119 VVVKRVN----T----CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLS 184 (301)
Q Consensus 119 ~~~~~~~----~----~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~-----~~~~~ 184 (301)
..+..++ . .|.|++++... .++++|+.....+| ...|+++++++|++.|++|++|.+|. .+.++
T Consensus 174 ~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p 251 (490)
T 3ou5_A 174 IFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp ------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC
T ss_pred ccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCccCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccC
Confidence 2112221 1 18888887776 58999998777776 47899999999999999999999996 45678
Q ss_pred CccCCCCcEEEecccccccCCCCceeeEEEEcch--------------hHHHHHHHhhhhcC-CCCCHHhHHH----HHc
Q 022194 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKELYFLQNAEG-SGLAPFDCWI----CLR 245 (301)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~----~~~ 245 (301)
+|... +|++++|.||+|.|| |+|+|+++++ .+.+++........ .+......++ +.+
T Consensus 252 sP~~~-ADvVTtTTHKTLrGP---rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~E 327 (490)
T 3ou5_A 252 SPFKH-ADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 327 (490)
T ss_dssp CGGGT-CSEEEEESSSTTCSC---SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH
T ss_pred Ccccc-ceEEeccccccccCC---CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHH
Confidence 88876 899999999999988 5799998763 34444433222111 1111111111 222
Q ss_pred c-cccHHHHHHHHHHHHHHHHHHHHhC
Q 022194 246 G-VKTMALRVEKQQDNAQKIAEFLASH 271 (301)
Q Consensus 246 ~-l~~~~~~~~~~~~~~~~l~~~l~~~ 271 (301)
+ ...+.++.++..+|++.|.+.|.+.
T Consensus 328 a~~p~fk~Ya~qVv~NAkaLA~~L~~~ 354 (490)
T 3ou5_A 328 ACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 2346788899999999999999886
No 232
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.63 E-value=1.2e-15 Score=134.42 Aligned_cols=203 Identities=12% Similarity=0.039 Sum_probs=138.0
Q ss_pred hHHHHHHHHHhhcCCC---ceEEe-cchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC---
Q 022194 56 TRDALESLLAKLDKAD---RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (301)
Q Consensus 56 ~~~~l~~~l~~~~~~~---~~i~~-~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--- 127 (301)
..++.++.++++++++ +++++ ++||++++ ++..++++||+|++....+.+.. |...++..| ++..++.+
T Consensus 73 ~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~--~~~~a~~~G-~v~~v~~~~~~ 149 (386)
T 3qm2_A 73 VAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAAS--AIKEAKKYC-APQIIDAKITV 149 (386)
T ss_dssp CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHH--HHHHHTTTS-EEEEEECEEEE
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHH--HHHHHHHhC-CeEEEecCccc
Confidence 3788999999999986 24553 56789986 66778899999876555555542 445567778 77777643
Q ss_pred -----CHHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCCcCCccccC-ccCCCCcEEEecccc
Q 022194 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATK 200 (301)
Q Consensus 128 -----d~~~l~~~l~~~~~~v~i~~~~np~G~~-~~l~~l~~l~~~~~~~li~D~~~~~~~~~~-~~~~~~di~~~S~sK 200 (301)
++++++.++++++++|.+++..|.+|.+ .|+++|. +|+++++|.+++.+..+- ..+. +++++|.+|
T Consensus 150 ~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~--~~~~~s~hK 222 (386)
T 3qm2_A 150 DGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY--GVIYAGAQK 222 (386)
T ss_dssp TTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC--SEEEEETTT
T ss_pred CCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc--CEEEEeccc
Confidence 3567788888899999999999999996 8999886 799999999999988763 3334 467899999
Q ss_pred cccCCCCceeeEEEEcchhHH----------HHHHHhhh-hcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHH
Q 022194 201 FIAGHSDVMAGVLAVKGERLA----------KELYFLQN-AEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQK 263 (301)
Q Consensus 201 ~~~g~~g~~~g~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~ 263 (301)
++ ||+|+ |+++.+++.+. +....... ....+.+....+.+..+++. +++..++..+.+++
T Consensus 223 ~l-GP~G~--g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~ 299 (386)
T 3qm2_A 223 NI-GPAGL--TLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAEL 299 (386)
T ss_dssp TT-CCTTE--EEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cc-CCCcc--EEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 99 79884 88888765421 00001111 11123333333344344433 34445666777778
Q ss_pred HHHHHHhC
Q 022194 264 IAEFLASH 271 (301)
Q Consensus 264 l~~~l~~~ 271 (301)
+.+.|++.
T Consensus 300 l~~~l~~~ 307 (386)
T 3qm2_A 300 LYGVIDNS 307 (386)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
Confidence 88888765
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.61 E-value=4.2e-15 Score=133.74 Aligned_cols=253 Identities=16% Similarity=0.153 Sum_probs=150.4
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~ 85 (301)
.++|||.++ +.-+|..++.+..+.. .+.+.. ....+.....+...++.+.|.++.. .+.+++++||++|+..
T Consensus 64 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~q~~~~--~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~ 140 (456)
T 4atq_A 64 NSFIDLGSGIAVTSVGASDPAVVAAVQ-EAAAHF--THTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVEN 140 (456)
T ss_dssp CEEEESSHHHHTCTTCTTCHHHHHHHH-HHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred CEEEEccccHHHHhcCCCCHHHHHHHH-HHHhhc--cCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHH
Confidence 378888644 4558876655554432 221110 1111111123446778888988874 3467788999999864
Q ss_pred HHhc---cCCCCeEEEcCCCCccHHHHHhhhc----------ccCCcEEEEecCC-----------CH-------HHHHh
Q 022194 86 VTHL---LGTGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNTC-----------DL-------DEVAS 134 (301)
Q Consensus 86 ~~~~---~~~g~~Vlv~~~~y~~~~~~~~~~~----------~~~g~~~~~~~~~-----------d~-------~~l~~ 134 (301)
.+.+ ....++|+....+||+......... ......+..++.. +. +.++.
T Consensus 141 AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~ 220 (456)
T 4atq_A 141 AVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEK 220 (456)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHH
Confidence 4433 3456789999999998753321111 0111233334321 12 22333
Q ss_pred hcC-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCC----ccccCccCCCCcEEEecccccccCC
Q 022194 135 AIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS----PVLSRPLELGADIVMHSATKFIAGH 205 (301)
Q Consensus 135 ~l~-~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~----~~~~~~~~~~~di~~~S~sK~~~g~ 205 (301)
.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||++.. |.+.....+|....+.+++|.++|
T Consensus 221 ~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lgg- 299 (456)
T 4atq_A 221 QIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAG- 299 (456)
T ss_dssp HTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGT-
T ss_pred hhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccC-
Confidence 333 47889999988887787754 99999999999999999999864 223333334443334458899865
Q ss_pred CCceeeEEEEcchhHHHHHHHhhhhcCCCCCHHhHHHHHcccccHHH--HHHHHHHHHHHHHHHHH
Q 022194 206 SDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA 269 (301)
Q Consensus 206 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~ 269 (301)
|+..|.++++++ +.+.+....+..+++-++.+++++++.++.+.+ ..++..+..+++.+.|+
T Consensus 300 -g~P~~av~~~~~-i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~ 363 (456)
T 4atq_A 300 -GLPLSAITGRAD-LLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLR 363 (456)
T ss_dssp -TSSCEEEEEEHH-HHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred -cCCceeeEecHH-HHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 456788877754 444333334445566788888888888776632 23444444445555544
No 234
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.56 E-value=5.3e-14 Score=122.92 Aligned_cols=201 Identities=12% Similarity=0.006 Sum_probs=134.3
Q ss_pred HHHHHHHHHhhcCCC---ceEE-ecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----
Q 022194 57 RDALESLLAKLDKAD---RALC-FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~---~~i~-~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~---- 127 (301)
.++.++.++++++++ ++++ +++||++++ ++..++ +||++++....+.+. .|...++..|.+++.++.+
T Consensus 52 ~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~--~~~~~a~~~G~~v~~~~~~~~g~ 128 (361)
T 3m5u_A 52 HFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTK--KAIKEAQILGVNVKTVASSEESN 128 (361)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHH--HHHHHHHHTTCCEEEEEECTTTT
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHH--HHHHHHHHcCCceEEEecccCcC
Confidence 778889999999984 3455 355579986 666677 788663222233333 2334556678777777643
Q ss_pred ---CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcCCccccCccCCCCcEEEecccccccC
Q 022194 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 204 (301)
Q Consensus 128 ---d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~~~g 204 (301)
+++. + +++++++|.+++..|.+|.+.|. +++ +|+++++|.+++.+..+-... +.|++++|.||++ |
T Consensus 129 ~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~-~~d~~~~s~~K~~-g 197 (361)
T 3m5u_A 129 FDHIPRV--E-FSDNADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS-NIALFYGGVQKNA-G 197 (361)
T ss_dssp SCSCCCC--C-CCTTSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT-TEEEEEEETTTTS-S
T ss_pred CCcCChh--h-cCCCCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc-cCCEEEEechhcc-C
Confidence 2344 3 78899999999999999998662 333 499999999999988764443 4799999999999 7
Q ss_pred CCCceeeEEEEcchhHHHHHHH-----------h--hhhcCCCCCHHhHHHHHccccc------HHHHHHHHHHHHHHHH
Q 022194 205 HSDVMAGVLAVKGERLAKELYF-----------L--QNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIA 265 (301)
Q Consensus 205 ~~g~~~g~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~ 265 (301)
|+|+ |+++.+++.+ +.+.. . ......+.+....+.+..+++. ++...++..+.++++.
T Consensus 198 p~G~--g~l~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~ 274 (361)
T 3m5u_A 198 ISGL--SCIFIRKDML-ERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLY 274 (361)
T ss_dssp CTTC--EEEEEEHHHH-HHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCcc--EEEEEcHHHH-hhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 9985 8888886544 22211 0 0111134444444444444432 4555677778888899
Q ss_pred HHHHhCCCc
Q 022194 266 EFLASHPRV 274 (301)
Q Consensus 266 ~~l~~~~~v 274 (301)
+.|++++++
T Consensus 275 ~~L~~~~g~ 283 (361)
T 3m5u_A 275 ECIDLSNGF 283 (361)
T ss_dssp HHHHTSTTS
T ss_pred HHHHHCCCe
Confidence 999887755
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.53 E-value=2.3e-13 Score=122.84 Aligned_cols=265 Identities=16% Similarity=0.127 Sum_probs=156.3
Q ss_pred ceeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCC-C--CchHHHHHHHHHhhcC--CCceEEecchHHHH
Q 022194 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G--NPTRDALESLLAKLDK--ADRALCFTSGMAAL 83 (301)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~-g--~~~~~~l~~~l~~~~~--~~~~i~~~sG~~ai 83 (301)
.++|||.++ +.-+|..++.+..+.. .+.+ +.. .+... + ++...+|.+.|.++.. .+.+.+.+||++|+
T Consensus 67 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~-~q~~--~l~--~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~ 141 (473)
T 4e3q_A 67 RRYLDANSGLWNMVAGFDHKGLIDAAK-AQYE--RFP--GYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAN 141 (473)
T ss_dssp CEEEETTTTTTTCTTCSCCHHHHHHHH-HHHH--HCC--CCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHH
T ss_pred CEEEEcccCHHHhhccCCCHHHHHHHH-HHHH--hcc--cccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHH
Confidence 478898643 4457876655544332 2211 101 12222 2 2446788899998874 45788899999998
Q ss_pred HHHHhcc---------CCCCeEEEcCCCCccHHHHHhhhc----------ccCCcEEEEecC--------C--------C
Q 022194 84 AAVTHLL---------GTGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNT--------C--------D 128 (301)
Q Consensus 84 ~~~~~~~---------~~g~~Vlv~~~~y~~~~~~~~~~~----------~~~g~~~~~~~~--------~--------d 128 (301)
...+++. ....+|+.....||+.....-... ...+......+. . .
T Consensus 142 e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 221 (473)
T 4e3q_A 142 DTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARL 221 (473)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHH
Confidence 6444432 124578888999998643211111 111222222221 0 1
Q ss_pred HHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCCcCCc-c---ccCccCCCCcEEEe
Q 022194 129 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-V---LSRPLELGADIVMH 196 (301)
Q Consensus 129 ~~~l~~~l~----~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~~li~D~~~~~~-~---~~~~~~~~~di~~~ 196 (301)
.+++++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||+++.. - +......|....+.
T Consensus 222 ~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~ 301 (473)
T 4e3q_A 222 ARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAI 301 (473)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEE
T ss_pred HHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChH
Confidence 233444432 46788999988887787754 999999999999999999998643 2 22222334433344
Q ss_pred cccccccCCCCceeeEEEEcchhHHHHHHHh-------hhhcCCCCCHHhHHHHHcccccHH--HHHHHHHHHHHHHHHH
Q 022194 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEF 267 (301)
Q Consensus 197 S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~ 267 (301)
+++|.++| +.+..|.++++++ +.+.+... .+..+.+-+|.+++++++.++.+. ...++..+..+++.+.
T Consensus 302 t~~K~l~g-G~~Pl~av~~~~~-i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~ 379 (473)
T 4e3q_A 302 ISSKNLTA-GFFPMGAVILGPE-LSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEER 379 (473)
T ss_dssp EECGGGGT-TSSCCEEEEECHH-HHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHH
T ss_pred HhcccccC-CCCCcccccccHH-HHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHH
Confidence 58999965 3356788888754 44443321 123345567888888888877653 2335555555666666
Q ss_pred HHh---CCCcceEecCCC
Q 022194 268 LAS---HPRVKKVNYAGL 282 (301)
Q Consensus 268 l~~---~~~v~~v~~p~~ 282 (301)
|++ ++.|..++.-|+
T Consensus 380 L~~l~~~~~v~~vRG~Gl 397 (473)
T 4e3q_A 380 LKHIAERPNIGEYRGIGF 397 (473)
T ss_dssp HHHHTTSTTEEEEEEETT
T ss_pred HHHHhcCCCeeEEeecce
Confidence 654 566666655443
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.44 E-value=2.1e-14 Score=137.95 Aligned_cols=265 Identities=9% Similarity=0.027 Sum_probs=154.2
Q ss_pred eeeecCCC--CCCCCccccCeeecceeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEecchHHHHHHH
Q 022194 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAAV 86 (301)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~p~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~~---~~~~i~~~sG~~ai~~~ 86 (301)
.++||.++ +..+|...+|.+..+...+.+. .....+..+.++...+|.++|+++.+ .+.+++++||++|+...
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~--l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~A 458 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAAR--FGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIA 458 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHH--HSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhh--cccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHH
Confidence 68999754 7889988455555443233111 01111111234567899999999986 45788999999988533
Q ss_pred Hhcc------C------------CCCeEEEcCCCCccHHHHHhhhccc--------------CCc-------------EE
Q 022194 87 THLL------G------------TGEEIVAGDDLYGGTDRLLSRVTPK--------------TGV-------------VV 121 (301)
Q Consensus 87 ~~~~------~------------~g~~Vlv~~~~y~~~~~~~~~~~~~--------------~g~-------------~~ 121 (301)
+.+. + ...+|+..+..||+.....-..... .+. ..
T Consensus 459 lK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 538 (831)
T 4a0g_A 459 LKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWN 538 (831)
T ss_dssp HHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEE
T ss_pred HHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceE
Confidence 3322 1 1347888899998764332122110 000 01
Q ss_pred EEecC------------CC------------------HHHHHhhcC--------CCceEEEEeCC-CCCcccccc----H
Q 022194 122 KRVNT------------CD------------------LDEVASAIG--------PWTKLVWVESP-TNPRQQICD----I 158 (301)
Q Consensus 122 ~~~~~------------~d------------------~~~l~~~l~--------~~~~~v~i~~~-~np~G~~~~----l 158 (301)
...+. .+ .+.+++.+. +++.+|+++.. ++..|...+ +
T Consensus 539 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L 618 (831)
T 4a0g_A 539 ISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQ 618 (831)
T ss_dssp EECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHH
T ss_pred ecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHH
Confidence 11110 11 145666664 35788899986 787787764 9
Q ss_pred HHHHHHHHHcCCEEEEeCCcCC-cc---ccCccCCCCcEEEecccccccCCCCceeeEEEEcchhHHHHHHHh------h
Q 022194 159 RKIAEMAHAHGALLLVDNSIMS-PV---LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL------Q 228 (301)
Q Consensus 159 ~~l~~l~~~~~~~li~D~~~~~-~~---~~~~~~~~~di~~~S~sK~~~g~~g~~~g~~~~~~~~~~~~~~~~------~ 228 (301)
++|.++|++||+++|+||++.. |. .......|....+.+++|.++| +.++.|+++++++ +.+.+... .
T Consensus 619 ~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~g-G~~Plgav~~~~~-i~~~~~~~~~~~~~~ 696 (831)
T 4a0g_A 619 RVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLTG-GMVPLAVTLATDA-VFDSFSGDSKLKALL 696 (831)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGGT-TSSCCEEEEECHH-HHHTTCSSCGGGSCC
T ss_pred HHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEeccccc-CccCcEEEEECHH-HHHHHhcccccccce
Confidence 9999999999999999999863 22 2221222333333469999965 2256788888754 44433221 1
Q ss_pred hhcCCCCCHHhHHHHHcccccHHH--HHHHHHHH--------HHHHHHHHHhCCCcceEecC
Q 022194 229 NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDN--------AQKIAEFLASHPRVKKVNYA 280 (301)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~--------~~~l~~~l~~~~~v~~v~~p 280 (301)
+..+.+.++.++++++..++.+.+ ..++..++ .+.+.+.+++++.|..++..
T Consensus 697 hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~ 758 (831)
T 4a0g_A 697 HGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVI 758 (831)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEE
T ss_pred eecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeec
Confidence 334456688888888777765532 11111111 12345566777777666543
No 237
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.74 E-value=4.2 Score=27.79 Aligned_cols=90 Identities=22% Similarity=0.192 Sum_probs=55.0
Q ss_pred ceEEecchHHHHHHHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.+++++.|.-+...+..+.+.| .+|.+.+..-... ......++.....+..+.+.+++.+. ...+|+.+.+..
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~~~~~ 80 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAAL-----AVLNRMGVATKQVDAKDEAGLAKALG-GFDAVISAAPFF 80 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHH-----HHHHTTTCEEEECCTTCHHHHHHHTT-TCSEEEECSCGG
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHH-----HHHHhCCCcEEEecCCCHHHHHHHHc-CCCEEEECCCch
Confidence 3555655654444555555667 5676654432111 11225677888888888888888875 567777655422
Q ss_pred CccccccHHHHHHHHHHcCCEEE
Q 022194 151 PRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li 173 (301)
....+.+.|.+.|+..+
T Consensus 81 ------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 81 ------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp ------GHHHHHHHHHHTTCEEE
T ss_pred ------hhHHHHHHHHHhCCCEE
Confidence 23678888888887654
No 238
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=79.49 E-value=3.2 Score=30.20 Aligned_cols=41 Identities=17% Similarity=0.336 Sum_probs=27.6
Q ss_pred HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 132 l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
++++....++.+++.... . -+++.++|+++|+.++-+.+.+
T Consensus 87 ~~~~~~~gi~~i~~~~g~-----~--~~~~~~~a~~~Gir~vgpnc~g 127 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGI-----R--HPEFEKALKEAGIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHCCSCEEECTTC-----C--CHHHHHHHHHTTCCEEESCCHH
T ss_pred HHHHHHcCCCEEEEcCCc-----C--HHHHHHHHHHcCCEEEcCCccc
Confidence 333444455666654322 1 3889999999999999988854
No 239
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=78.80 E-value=5.3 Score=28.62 Aligned_cols=89 Identities=15% Similarity=0.039 Sum_probs=53.0
Q ss_pred CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 71 ~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
...++++.|.-+...+..+.+.|..|++.+..-... ..+...+..+...+..+.+.++++--.+..+|+++.++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~-----~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKI-----ELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD 81 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH-----HHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH-----HHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence 457778777755555555666677777665432211 222335778877888888888876445677777765521
Q ss_pred CccccccHHHHHHHHHHcC
Q 022194 151 PRQQICDIRKIAEMAHAHG 169 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~ 169 (301)
..-..++..+++.+
T Consensus 82 -----~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 82 -----EFNLKILKALRSVS 95 (141)
T ss_dssp -----HHHHHHHHHHHHHC
T ss_pred -----HHHHHHHHHHHHhC
Confidence 11233555666654
No 240
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=77.58 E-value=14 Score=28.54 Aligned_cols=91 Identities=16% Similarity=0.123 Sum_probs=53.3
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.+++++|+..+ .++..+++.|.+|.+..-.-... ... ..++++...+..|.+.+++.++ ++.+|+.+....
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi~~a~~~ 78 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-----KIE-NEHLKVKKADVSSLDEVCEVCK-GADAVISAFNPG 78 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC-----CCC-CTTEEEECCCTTCHHHHHHHHT-TCSEEEECCCC-
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc-----hhc-cCceEEEEecCCCHHHHHHHhc-CCCEEEEeCcCC
Confidence 36666666554 46667778888887654321111 111 1567777777789999998887 466666543221
Q ss_pred Ccc------ccccHHHHHHHHHHcCC
Q 022194 151 PRQ------QICDIRKIAEMAHAHGA 170 (301)
Q Consensus 151 p~G------~~~~l~~l~~l~~~~~~ 170 (301)
... .+.-...+++.|++.++
T Consensus 79 ~~~~~~~~~n~~~~~~l~~~~~~~~~ 104 (227)
T 3dhn_A 79 WNNPDIYDETIKVYLTIIDGVKKAGV 104 (227)
T ss_dssp -----CCSHHHHHHHHHHHHHHHTTC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhCC
Confidence 110 11225668888888775
No 241
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=77.22 E-value=15 Score=30.69 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=56.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc------CCcEEEEecCCCHHHHHhhcCCCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK------TGVVVKRVNTCDLDEVASAIGPWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~------~g~~~~~~~~~d~~~l~~~l~~~~~~v 143 (301)
..+++++|+.-+ .++..+++.|.+|.+..-.-............. .++++...+..|.+.+++++. ++.+|
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~V 104 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-GVDHV 104 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-TCSEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-CCCEE
Confidence 456777766444 466667778888775443222111111111111 567888888889999999887 56666
Q ss_pred EEeCCCCCccc-cc-----------cHHHHHHHHHHcCC
Q 022194 144 WVESPTNPRQQ-IC-----------DIRKIAEMAHAHGA 170 (301)
Q Consensus 144 ~i~~~~np~G~-~~-----------~l~~l~~l~~~~~~ 170 (301)
+-......... .. -...|++.|++.++
T Consensus 105 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 105 LHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 65433211111 11 13458888888875
No 242
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=76.97 E-value=7.1 Score=31.77 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=53.0
Q ss_pred EEecchHHHH--HHHHhccCC-CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC-
Q 022194 74 LCFTSGMAAL--AAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT- 149 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~-g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~- 149 (301)
+++++|+..+ .++..+.+. |.+|.+..-.-... ......++++...+..|.+.++++++ ...+|+.+...
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-----~~~~~~~v~~~~~D~~d~~~l~~~~~-~~d~vi~~a~~~ 76 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-----PDDWRGKVSVRQLDYFNQESMVEAFK-GMDTVVFIPSII 76 (289)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-----CGGGBTTBEEEECCTTCHHHHHHHTT-TCSEEEECCCCC
T ss_pred EEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-----HHhhhCCCEEEEcCCCCHHHHHHHHh-CCCEEEEeCCCC
Confidence 5666665444 344445554 66665432211111 12234678888889889999999887 45666554332
Q ss_pred CCc-cccccHHHHHHHHHHcCC
Q 022194 150 NPR-QQICDIRKIAEMAHAHGA 170 (301)
Q Consensus 150 np~-G~~~~l~~l~~l~~~~~~ 170 (301)
++. ..+.....+++.|++.++
T Consensus 77 ~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 77 HPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTC
T ss_pred ccchhhHHHHHHHHHHHHHcCC
Confidence 221 112335778999999885
No 243
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=76.73 E-value=9.5 Score=30.87 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=53.1
Q ss_pred EEecchHHHH--HHHHhccCC--CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 74 LCFTSGMAAL--AAVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~--g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
+++++|+..+ .++..+++. |.+|.+..-.-.... . ....++++...+..|.+.+.++++ .+.+|+.....
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~-l~~~~~~~~~~D~~d~~~l~~~~~-~~d~vi~~a~~ 76 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS----T-LADQGVEVRHGDYNQPESLQKAFA-GVSKLLFISGP 76 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH----H-HHHTTCEEEECCTTCHHHHHHHTT-TCSEEEECCCC
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh----H-HhhcCCeEEEeccCCHHHHHHHHh-cCCEEEEcCCC
Confidence 6677776544 455666765 766664332111111 1 112467788888889999998887 45666654333
Q ss_pred CCcc--ccccHHHHHHHHHHcCC
Q 022194 150 NPRQ--QICDIRKIAEMAHAHGA 170 (301)
Q Consensus 150 np~G--~~~~l~~l~~l~~~~~~ 170 (301)
.+.. .+.-...+++.|++.++
T Consensus 77 ~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 77 HYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCchHHHHHHHHHHHHHHHcCC
Confidence 2211 12234668888888875
No 244
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=76.14 E-value=11 Score=33.30 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=58.3
Q ss_pred ceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
.++++++|..+...+..+++.|-.|.+.+|...... .......++.+..-.. +.++++ +..+|+. ++.++
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~---~~l~~~~~i~~~~~~~-~~~~l~-----~~~lVi~-at~~~ 83 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQF---TVWANEGMLTLVEGPF-DETLLD-----SCWLAIA-ATDDD 83 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHH---HHHHTTTSCEEEESSC-CGGGGT-----TCSEEEE-CCSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHH---HHHHhcCCEEEEECCC-CccccC-----CccEEEE-cCCCH
Confidence 578889998888888888888888888777655433 2333334455443222 223332 3445444 34432
Q ss_pred ccccccHHHHHHHHHHcCCEE-EEeCCc
Q 022194 152 RQQICDIRKIAEMAHAHGALL-LVDNSI 178 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~~~l-i~D~~~ 178 (301)
..-..+.+.|+++++++ ++|+.-
T Consensus 84 ----~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 84 ----TVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp ----HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ----HHHHHHHHHHHHcCCEEEECCCcc
Confidence 22467899999999987 677764
No 245
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=75.31 E-value=7.7 Score=31.38 Aligned_cols=91 Identities=20% Similarity=0.229 Sum_probs=50.6
Q ss_pred EEecchHHHH--HHHHhccCC--CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 74 LCFTSGMAAL--AAVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~--g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
+++++|+..+ .++..+++. |.+|.+..-.-.... . ....++++...+..|.+.++++++. ..+|+.....
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~-~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi~~a~~ 75 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ----A-LAAQGITVRQADYGDEAALTSALQG-VEKLLLISSS 75 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH----H-HHHTTCEEEECCTTCHHHHHHHTTT-CSEEEECC--
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh----h-hhcCCCeEEEcCCCCHHHHHHHHhC-CCEEEEeCCC
Confidence 4566666444 455666665 776664332111111 1 1124677888888899999988864 5666554332
Q ss_pred CCccccccHHHHHHHHHHcCC
Q 022194 150 NPRQQICDIRKIAEMAHAHGA 170 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~ 170 (301)
.+...+.-...+++.|++.++
T Consensus 76 ~~~~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 76 EVGQRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp ------CHHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHHHHHHHcCC
Confidence 222223346778888888775
No 246
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=74.40 E-value=12 Score=27.17 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=29.4
Q ss_pred HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 130 ~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
+.+++++...++.+++.. |. .-+++.++|+++|+.++-+.+.+
T Consensus 92 ~vv~~~~~~gi~~i~~~~-----g~--~~~~l~~~a~~~Gi~vvGpnc~g 134 (144)
T 2d59_A 92 EYVEQAIKKGAKVVWFQY-----NT--YNREASKKADEAGLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHTCSEEEECT-----TC--CCHHHHHHHHHTTCEEEESCCHH
T ss_pred HHHHHHHHcCCCEEEECC-----Cc--hHHHHHHHHHHcCCEEEcCCchh
Confidence 334455555667776542 22 25889999999999998888754
No 247
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=74.26 E-value=5.8 Score=31.65 Aligned_cols=91 Identities=11% Similarity=0.038 Sum_probs=52.1
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
+++..+.+....|.+|++..|.-..-.. ..+....|.++.-+...+.+++.+.+ .+..+|++.=.+.-++ +.+
T Consensus 35 ~lL~~~~r~~~~g~kvli~kp~~D~Ryg--~~i~sr~G~~~~a~~i~~~~di~~~~-~~~dvViIDEaQF~~~----v~e 107 (234)
T 2orv_A 35 ELMRRVRRFQIAQYKCLVIKYAKDTRYS--SSFCTHDRNTMEALPACLLRDVAQEA-LGVAVIGIDEGQFFPD----IVE 107 (234)
T ss_dssp HHHHHHHHHHTTTCCEEEEEETTCCCC-------------CEEEEESSGGGGHHHH-TTCSEEEESSGGGCTT----HHH
T ss_pred HHHHHHHHHHHCCCeEEEEeecCCccch--HHHHhhcCCeeEEEecCCHHHHHHHh-ccCCEEEEEchhhhhh----HHH
Confidence 5556777777778888876653221100 13344445555444434444444444 4678999886666543 888
Q ss_pred HHHHHHHcCCEEEEeCCc
Q 022194 161 IAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~ 178 (301)
+++++.+.|+.+|+=.-.
T Consensus 108 l~~~l~~~gi~VI~~GL~ 125 (234)
T 2orv_A 108 FCEAMANAGKTVIVAALD 125 (234)
T ss_dssp HHHHHHHTTCEEEEECCS
T ss_pred HHHHHHhCCCEEEEEecc
Confidence 888888899999986554
No 248
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=73.93 E-value=22 Score=29.11 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=56.3
Q ss_pred eEEecchHHH--HHHHHhccCCCCeEEEc-CCCCc---cHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEe
Q 022194 73 ALCFTSGMAA--LAAVTHLLGTGEEIVAG-DDLYG---GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (301)
Q Consensus 73 ~i~~~sG~~a--i~~~~~~~~~g~~Vlv~-~~~y~---~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~ 146 (301)
.+++++|+.. -..+..+++.|.+|.+. ...-. .....+. .....++++...+..|.+.+.++++. ..+|+..
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~-~d~vi~~ 83 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFKQLGAKLIEASLDDHQRLVDALKQ-VDVVISA 83 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHHTTTCEEECCCSSCHHHHHHHHTT-CSEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHH-HHHhCCeEEEeCCCCCHHHHHHHHhC-CCEEEEC
Confidence 3556665533 34555566667666543 32211 1111111 12345788888888899999998874 5666554
Q ss_pred CCCC-CccccccHHHHHHHHHHcC-C-EEE
Q 022194 147 SPTN-PRQQICDIRKIAEMAHAHG-A-LLL 173 (301)
Q Consensus 147 ~~~n-p~G~~~~l~~l~~l~~~~~-~-~li 173 (301)
.... +...+.....+++.|++.| + .+|
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 3322 1113344678999999988 5 344
No 249
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=73.92 E-value=17 Score=28.54 Aligned_cols=91 Identities=5% Similarity=-0.022 Sum_probs=54.2
Q ss_pred ceEEecchHHHH--HHHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~ 148 (301)
..+++++|+..+ ..+..+++.| .+|++..-.-... ......++.+...+..|.+.++++++ ...+|+.+..
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vv~~a~ 97 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-----HKPYPTNSQIIMGDVLNHAALKQAMQ-GQDIVYANLT 97 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-----CSSCCTTEEEEECCTTCHHHHHHHHT-TCSEEEEECC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-----cccccCCcEEEEecCCCHHHHHHHhc-CCCEEEEcCC
Confidence 356777776555 4666778888 5665533211111 11223467777788889999998887 4566654432
Q ss_pred CCCccccccHHHHHHHHHHcCC
Q 022194 149 TNPRQQICDIRKIAEMAHAHGA 170 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~ 170 (301)
. .......+.+++.+++.++
T Consensus 98 ~--~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 98 G--EDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp S--TTHHHHHHHHHHHHHHTTC
T ss_pred C--CchhHHHHHHHHHHHHcCC
Confidence 2 1122335678888888764
No 250
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=72.69 E-value=7.5 Score=32.67 Aligned_cols=98 Identities=8% Similarity=0.045 Sum_probs=57.6
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEc-CCC-Cc-cHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEe
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDL-YG-GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~-y~-~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~ 146 (301)
.+++++|+.-+ ..+..+++.|..|.+. ... -. .-...+ ......++++...+..|.+.+.++++. .+.+|+..
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST 90 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence 46666665333 4555566667666543 322 11 111111 123346889999999999999988872 45666654
Q ss_pred CCCCCccccccHHHHHHHHHHcC-CEEEE
Q 022194 147 SPTNPRQQICDIRKIAEMAHAHG-ALLLV 174 (301)
Q Consensus 147 ~~~np~G~~~~l~~l~~l~~~~~-~~li~ 174 (301)
.... .+.....|++.|++.+ +..++
T Consensus 91 a~~~---n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 91 VGGE---SILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCGG---GGGGHHHHHHHHHHHCCCSEEE
T ss_pred Cchh---hHHHHHHHHHHHHHcCCceEEe
Confidence 3321 2334578999999988 64444
No 251
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=69.88 E-value=35 Score=26.15 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=55.1
Q ss_pred EEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCC-HHHHHhhcCCCceEEEEeCCCC
Q 022194 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD-LDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d-~~~l~~~l~~~~~~v~i~~~~n 150 (301)
+++++|+..+ .++..+++.|.+|.+..-.-. ......++++...+..| .+.+.++++ ++.+|+.+....
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~~~-~~d~vi~~ag~~ 74 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE-------QVPQYNNVKAVHFDVDWTPEEMAKQLH-GMDAIINVSGSG 74 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG-------GSCCCTTEEEEECCTTSCHHHHHTTTT-TCSEEEECCCCT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc-------chhhcCCceEEEecccCCHHHHHHHHc-CCCEEEECCcCC
Confidence 5666666444 466778888888775443211 11122567888888888 999998887 566666554332
Q ss_pred Cccc----cccHHHHHHHHHHcCC
Q 022194 151 PRQQ----ICDIRKIAEMAHAHGA 170 (301)
Q Consensus 151 p~G~----~~~l~~l~~l~~~~~~ 170 (301)
.... +.-...+++.|++.++
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 75 GKSLLKVDLYGAVKLMQAAEKAEV 98 (219)
T ss_dssp TSSCCCCCCHHHHHHHHHHHHTTC
T ss_pred CCCcEeEeHHHHHHHHHHHHHhCC
Confidence 2111 1125678888888764
No 252
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=69.64 E-value=17 Score=29.31 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=49.1
Q ss_pred hcCCC-ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC--CHHHHHhhcC----
Q 022194 67 LDKAD-RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--DLDEVASAIG---- 137 (301)
Q Consensus 67 ~~~~~-~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~--d~~~l~~~l~---- 137 (301)
+|..+ ..+++|+|+..| .....+.+.|-+|++.+-.-....+.. .-+...|.++..+..| |.+++++.++
T Consensus 4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-DTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 34444 578888888776 356778889999988754322222222 2233445555555544 7777766654
Q ss_pred --CCceEEEEeCCCCCccc
Q 022194 138 --PWTKLVWVESPTNPRQQ 154 (301)
Q Consensus 138 --~~~~~v~i~~~~np~G~ 154 (301)
.++.+++-+...++.+.
T Consensus 83 ~~G~iDiLVNNAG~~~~~~ 101 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKP 101 (255)
T ss_dssp TTCCCCEEEECCCCCCCCC
T ss_pred HCCCCcEEEECCCCCCCCC
Confidence 35666554433333333
No 253
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=68.90 E-value=50 Score=27.56 Aligned_cols=99 Identities=13% Similarity=0.090 Sum_probs=56.6
Q ss_pred CceEEecchH-HHHHHHHhccCCCC--eEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEE
Q 022194 71 DRALCFTSGM-AALAAVTHLLGTGE--EIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (301)
Q Consensus 71 ~~~i~~~sG~-~ai~~~~~~~~~g~--~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i 145 (301)
.+.+++-+.+ .++..+....+.|. +|++.+ |.+.+... ..-+...|+++..+.......+.+ ++..|++
T Consensus 122 g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l--a~~L~~~gI~vtli~Dsa~~~~m~----~vd~Viv 195 (315)
T 3ecs_A 122 GATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKM--AKALCHLNVPVTVVLDAAVGYIME----KADLVIV 195 (315)
T ss_dssp TEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHH--HHHHHTTTCCEEEECGGGHHHHGG----GCSEEEE
T ss_pred CCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHH--HHHHHHcCCCEEEEehhHHHHHHH----hCCEEEE
Confidence 3455554444 33445555554443 455543 55555532 244567799998888444444443 4455554
Q ss_pred e-CCCCCcccccc---HHHHHHHHHHcCCEEEEe
Q 022194 146 E-SPTNPRQQICD---IRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 146 ~-~~~np~G~~~~---l~~l~~l~~~~~~~li~D 175 (301)
- ..-...|.+.. --.++-+|+.+|+++++=
T Consensus 196 GAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 196 GAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp ECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred CceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 3 32334555543 456888899999988764
No 254
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=68.56 E-value=11 Score=33.02 Aligned_cols=93 Identities=13% Similarity=0.052 Sum_probs=64.8
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC-cEEEEecC--CCHHHHHhhcCC-CceEEEEeCCCCCccccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQIC 156 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g-~~~~~~~~--~d~~~l~~~l~~-~~~~v~i~~~~np~G~~~ 156 (301)
+++..+..++++-..+.+.+|....-...|..+.+..+ +.+.-=+. .+++.+++.+.. ...++.+- + |-.|.+.
T Consensus 283 elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIK-v-nqiGGIT 360 (441)
T 3qtp_A 283 GLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIK-V-NQIGTLT 360 (441)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-G-GGTCCHH
T ss_pred HHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEec-c-cccccHH
Confidence 45556666776666788999977666666767767666 55443332 368888888864 44455443 3 4479999
Q ss_pred cHHHHHHHHHHcCCEEEEe
Q 022194 157 DIRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 157 ~l~~l~~l~~~~~~~li~D 175 (301)
+..+++++|+++|+.+++=
T Consensus 361 Ealkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 361 ETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEe
Confidence 9999999999999887763
No 255
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=68.28 E-value=34 Score=28.73 Aligned_cols=102 Identities=10% Similarity=0.048 Sum_probs=56.0
Q ss_pred ceEEecchHHHH--HHHHhccC--CCCeEEEcCCCCccHH---HHH-----hhhcccCCcEEEEecCCCHHHHHhhcCCC
Q 022194 72 RALCFTSGMAAL--AAVTHLLG--TGEEIVAGDDLYGGTD---RLL-----SRVTPKTGVVVKRVNTCDLDEVASAIGPW 139 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~--~g~~Vlv~~~~y~~~~---~~~-----~~~~~~~g~~~~~~~~~d~~~l~~~l~~~ 139 (301)
..+++++|+..+ .++..+++ .|.+|++.+-.-.... ... .......++.+...+..|.+.++++...+
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 90 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLH 90 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccC
Confidence 357777777555 46666777 7888876542111000 000 01122345677778888999888873456
Q ss_pred ceEEEEeCCCCCcccc----------ccHHHHHHHHHHcCCEEE
Q 022194 140 TKLVWVESPTNPRQQI----------CDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 140 ~~~v~i~~~~np~G~~----------~~l~~l~~l~~~~~~~li 173 (301)
+.+|+-+......... .-...+++.|++.++.+|
T Consensus 91 ~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V 134 (362)
T 3sxp_A 91 FDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVI 134 (362)
T ss_dssp CSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 7776654332211101 113458888888876533
No 256
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=68.26 E-value=11 Score=33.26 Aligned_cols=92 Identities=14% Similarity=0.084 Sum_probs=64.6
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--CCHHHHHhhcCCC-ceEEEEeCCCCCcccccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICD 157 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--~d~~~l~~~l~~~-~~~v~i~~~~np~G~~~~ 157 (301)
+++..+..++.+-+-+.+.+|....-...|..+.+...+.+.-=+. .+..++.+.+..+ ..+|.+. + |-.|.+.+
T Consensus 277 eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ik-v-~qiGGite 354 (436)
T 2al1_A 277 QLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLK-V-NQIGTLSE 354 (436)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHH
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEec-h-hhcCCHHH
Confidence 4454556666666678899997766666676666666666654333 2678888888754 4454433 3 44799999
Q ss_pred HHHHHHHHHHcCCEEEE
Q 022194 158 IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~ 174 (301)
..+++++|+++|+.+++
T Consensus 355 a~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 355 SIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 99999999999997765
No 257
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=67.88 E-value=14 Score=28.95 Aligned_cols=78 Identities=10% Similarity=0.114 Sum_probs=45.0
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCceE
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTKL 142 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~~~ 142 (301)
.+++|+|+..+ ..+..+++.|.+|++....-...........+.. .+.+...+..|.+.+++.++ ..+.+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV 83 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 56777777665 4666778888888765443222222222222122 34445556668888888876 26677
Q ss_pred EEEeCCCC
Q 022194 143 VWVESPTN 150 (301)
Q Consensus 143 v~i~~~~n 150 (301)
++-+....
T Consensus 84 li~~Ag~~ 91 (235)
T 3l77_A 84 VVANAGLG 91 (235)
T ss_dssp EEECCCCC
T ss_pred EEECCccc
Confidence 76554433
No 258
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=67.84 E-value=18 Score=26.03 Aligned_cols=41 Identities=17% Similarity=0.231 Sum_probs=27.9
Q ss_pred HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 132 l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
+++++...++.+++.... . -+++.+.++++|+.++-+.+.+
T Consensus 86 ~~~~~~~g~~~i~~~~~~-----~--~~~l~~~a~~~Gi~~igpnc~g 126 (138)
T 1y81_A 86 AKEAVEAGFKKLWFQPGA-----E--SEEIRRFLEKAGVEYSFGRCIM 126 (138)
T ss_dssp HHHHHHTTCCEEEECTTS-----C--CHHHHHHHHHHTCEEECSCCHH
T ss_pred HHHHHHcCCCEEEEcCcc-----H--HHHHHHHHHHCCCEEEcCCcce
Confidence 344444566777665321 1 4889999999999988777754
No 259
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=67.58 E-value=7.7 Score=31.81 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=26.8
Q ss_pred ceEEecchHHHHHHHHhccCCCCeEEEcCCCCc
Q 022194 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYG 104 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~ 104 (301)
.++++++|.-|...+..+++.|-.|.+.+|...
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 578889998888888888998988877777543
No 260
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=66.14 E-value=10 Score=29.41 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=32.1
Q ss_pred CCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 137 GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 137 ~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
.-.+.+|+.+-..|..|....+.++.+++++||+.++.
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 34678888776668899999999999999999987763
No 261
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=65.06 E-value=28 Score=28.46 Aligned_cols=88 Identities=11% Similarity=0.069 Sum_probs=52.7
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.+++++|+.-+ .++..+++.|.+|.+..-. .... . .. ++++...+.. .+.+.++++ ++.+|+-.....
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~----~-~~--~~~~~~~Dl~-~~~~~~~~~-~~d~Vih~a~~~ 73 (311)
T 3m2p_A 4 KIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNK----A-IN--DYEYRVSDYT-LEDLINQLN-DVDAVVHLAATR 73 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC------------CCEEEECCCC-HHHHHHHTT-TCSEEEECCCCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCcc----c-CC--ceEEEEcccc-HHHHHHhhc-CCCEEEEccccC
Confidence 36666666444 4666677778887755443 3332 1 11 7788888888 888888887 566666543322
Q ss_pred Ccccc--------ccHHHHHHHHHHcCC
Q 022194 151 PRQQI--------CDIRKIAEMAHAHGA 170 (301)
Q Consensus 151 p~G~~--------~~l~~l~~l~~~~~~ 170 (301)
..... .-...+++.|++.++
T Consensus 74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~ 101 (311)
T 3m2p_A 74 GSQGKISEFHDNEILTQNLYDACYENNI 101 (311)
T ss_dssp CSSSCGGGTHHHHHHHHHHHHHHHHTTC
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11111 124678888988875
No 262
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=64.72 E-value=41 Score=25.08 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=23.2
Q ss_pred cCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEE--EEeC
Q 022194 136 IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL--LVDN 176 (301)
Q Consensus 136 l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~l--i~D~ 176 (301)
+.++..+|+++. +|...++-++++.++++|+.+ |.|.
T Consensus 85 ~~~~d~~i~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 85 LRPTDLMIGVSV----WRYLRDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp CCTTEEEEEECC----SSCCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 344544444433 456677888999999988644 4443
No 263
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=63.88 E-value=33 Score=28.92 Aligned_cols=93 Identities=11% Similarity=0.170 Sum_probs=51.7
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEc-CCCCccHHHHHhhhcccCCcEEEEec-CCCHHHHHhhcCCCceEEEEeCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~y~~~~~~~~~~~~~~g~~~~~~~-~~d~~~l~~~l~~~~~~v~i~~~ 148 (301)
.+++++++..+ .++..+++.|.+|.+. ...-..... ......++++...+ ..|.+.+.++++. ...|+.+..
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~l~~~~~v~~v~~D~l~d~~~l~~~~~~-~d~Vi~~a~ 82 (352)
T 1xgk_A 7 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE---ELQAIPNVTLFQGPLLNNVPLMDTLFEG-AHLAFINTT 82 (352)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH---HHHTSTTEEEEESCCTTCHHHHHHHHTT-CSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHH---HHhhcCCcEEEECCccCCHHHHHHHHhc-CCEEEEcCC
Confidence 46666666444 3555566677777643 222111111 12222367777788 7899999888864 566664432
Q ss_pred CCCccccccHHHHHHHHHHcC
Q 022194 149 TNPRQQICDIRKIAEMAHAHG 169 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~ 169 (301)
.........-+.+++.|++.+
T Consensus 83 ~~~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 83 SQAGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp STTSCHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHcC
Confidence 221111122467888888887
No 264
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=63.75 E-value=13 Score=29.26 Aligned_cols=93 Identities=9% Similarity=0.085 Sum_probs=54.2
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
+++..+.+....|.+|++..|.-..-. .-..+....|....-++..+.+++.+.+.++..+|++.=.+.-+- .-++.
T Consensus 44 ~Llr~~~r~~~~g~kvli~kp~~D~R~-~~~~I~Sr~G~~~~a~~v~~~~di~~~i~~~~dvV~IDEaQFf~~--~~v~~ 120 (219)
T 3e2i_A 44 ELIRRLRRGIYAKQKVVVFKPAIDDRY-HKEKVVSHNGNAIEAINISKASEIMTHDLTNVDVIGIDEVQFFDD--EIVSI 120 (219)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC------------CBTTBCCEEEEESSGGGGGGSCCTTCSEEEECCGGGSCT--HHHHH
T ss_pred HHHHHHHHHHHcCCceEEEEeccCCcc-hhhhHHHhcCCceeeEEeCCHHHHHHHHhcCCCEEEEechhcCCH--HHHHH
Confidence 345566666666777887766443211 112455666766666665566777766767788888876666331 12455
Q ss_pred HHHHHHHcCCEEEEeCC
Q 022194 161 IAEMAHAHGALLLVDNS 177 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~ 177 (301)
+.+++ +.|+.+|+=.-
T Consensus 121 l~~la-~~gi~Vi~~GL 136 (219)
T 3e2i_A 121 VEKLS-ADGHRVIVAGL 136 (219)
T ss_dssp HHHHH-HTTCEEEEEEE
T ss_pred HHHHH-HCCCEEEEeec
Confidence 66666 68999988554
No 265
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=63.42 E-value=35 Score=27.22 Aligned_cols=68 Identities=15% Similarity=0.199 Sum_probs=41.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC--CCceEEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVW 144 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~--~~~~~v~ 144 (301)
..+++|+|+..| .....+.+.|-+|++.+-.-... .......+.....+..|.+++++.++ .++.+++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~-----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV-----HAPRHPRIRREELDITDSQRLQRLFEALPRLDVLV 83 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST-----TSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----hhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 467778887666 36677888898888765432221 11223345555566668888777765 3555554
No 266
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=62.58 E-value=24 Score=28.37 Aligned_cols=78 Identities=10% Similarity=0.085 Sum_probs=44.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-......+....+..+ +.+...+..|.+++++.++ .++.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 109 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLS 109 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 567888887666 46667788888887654322222222223333333 4455555567777766654 3667
Q ss_pred EEEEeCCC
Q 022194 142 LVWVESPT 149 (301)
Q Consensus 142 ~v~i~~~~ 149 (301)
+++-+...
T Consensus 110 ~li~nAg~ 117 (271)
T 4iin_A 110 YLVNNAGV 117 (271)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 76655433
No 267
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=62.43 E-value=25 Score=28.89 Aligned_cols=93 Identities=16% Similarity=0.120 Sum_probs=54.3
Q ss_pred eEEecchHHH--HHHHHhccCCCCeEEE-cCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 73 ALCFTSGMAA--LAAVTHLLGTGEEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 73 ~i~~~sG~~a--i~~~~~~~~~g~~Vlv-~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
.+++++++.. -.++..+++.|..|.+ ....-. ....+.. ....++++...+..|.+.+.++++. +.+|+.....
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~~-~d~vi~~a~~ 89 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS-KTTLLDE-FQSLGAIIVKGELDEHEKLVELMKK-VDVVISALAF 89 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCS-CHHHHHH-HHHTTCEEEECCTTCHHHHHHHHTT-CSEEEECCCG
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCc-hhhHHHH-hhcCCCEEEEecCCCHHHHHHHHcC-CCEEEECCch
Confidence 3566665533 3455666666766653 332211 1111111 2345788888898899999999874 5666544322
Q ss_pred CCccccccHHHHHHHHHHcC-CE
Q 022194 150 NPRQQICDIRKIAEMAHAHG-AL 171 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~-~~ 171 (301)
. .+.....+++.|++.+ +-
T Consensus 90 ~---~~~~~~~l~~aa~~~g~v~ 109 (318)
T 2r6j_A 90 P---QILDQFKILEAIKVAGNIK 109 (318)
T ss_dssp G---GSTTHHHHHHHHHHHCCCC
T ss_pred h---hhHHHHHHHHHHHhcCCCC
Confidence 1 1334678899999887 53
No 268
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=62.28 E-value=50 Score=26.97 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=45.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.........+... ..+.+...+..|.+.+++.++ ..+.
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 578888888666 356667888888877654433333222222222 234555566668777766654 3566
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 122 ~lvnnAg 128 (293)
T 3rih_A 122 VVCANAG 128 (293)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665433
No 269
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=62.10 E-value=22 Score=28.55 Aligned_cols=75 Identities=11% Similarity=0.104 Sum_probs=41.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++....-......+...++..+ +.+...+..|.+++++.++ ..+.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 98 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLD 98 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888887666 35667888898887743221111111112223334 3444555557777766664 3566
Q ss_pred EEEEe
Q 022194 142 LVWVE 146 (301)
Q Consensus 142 ~v~i~ 146 (301)
+++-+
T Consensus 99 ~lvnn 103 (270)
T 3is3_A 99 IAVSN 103 (270)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 66644
No 270
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=61.33 E-value=14 Score=26.89 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=28.9
Q ss_pred HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 132 l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
+++++...++.+++.. |.. -+++.+.|+++|+.++-+.+.+
T Consensus 87 ~~~~~~~g~~~i~i~~-----~~~--~~~l~~~a~~~Gi~~igpnc~g 127 (145)
T 2duw_A 87 AQEAIAIGAKTLWLQL-----GVI--NEQAAVLAREAGLSVVMDRCPA 127 (145)
T ss_dssp HHHHHHHTCCEEECCT-----TCC--CHHHHHHHHTTTCEEECSCCHH
T ss_pred HHHHHHcCCCEEEEcC-----ChH--HHHHHHHHHHcCCEEEcCCeee
Confidence 4444445667776642 222 5889999999999999888865
No 271
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=61.23 E-value=26 Score=28.18 Aligned_cols=77 Identities=12% Similarity=0.141 Sum_probs=43.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-......+...++..+ +.+...+..|.+.+++.++ ..+.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id 108 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLD 108 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 577888887666 36667888898887643322222211112222333 3444555667777766654 3567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 109 ~lv~nAg 115 (269)
T 4dmm_A 109 VLVNNAG 115 (269)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665543
No 272
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=60.93 E-value=13 Score=26.50 Aligned_cols=73 Identities=16% Similarity=0.060 Sum_probs=46.4
Q ss_pred ceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
+.++++.|.-+...+..+.+.|..|++.+..-... ..+...|..+..-+..+.+.++++--.+.++++++.++
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~-----~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRV-----DELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH-----HHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHH-----HHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 57788888755555555555676676655543222 22334688888778778888876533466777766554
No 273
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=60.60 E-value=44 Score=24.06 Aligned_cols=87 Identities=9% Similarity=-0.016 Sum_probs=48.8
Q ss_pred CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcc-cCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 71 ~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
..+++++.|.-+...+..+...|..|.+.+..-... ..+. ..|..+...+..+.+.+++.--....+|+++.+.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~-----~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAF-----HRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGG-----GGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH-----HHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence 467788888755555555555566776655432222 2233 5566665555556776665412356677766543
Q ss_pred CCccccccHHHHHHHHHH
Q 022194 150 NPRQQICDIRKIAEMAHA 167 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~ 167 (301)
. .....+..++++
T Consensus 95 ~-----~~~~~~~~~~~~ 107 (155)
T 2g1u_A 95 D-----STNFFISMNARY 107 (155)
T ss_dssp H-----HHHHHHHHHHHH
T ss_pred c-----HHHHHHHHHHHH
Confidence 2 123456666776
No 274
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=60.53 E-value=21 Score=27.28 Aligned_cols=91 Identities=9% Similarity=0.023 Sum_probs=49.5
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
+++..+.++...|.+|++..|.-..- ..-..+....|.........+.+++.+.+.++..+|++.-.+.-+- ..++.
T Consensus 24 ~ll~~a~r~~~~g~kV~v~k~~~d~r-~~~~~i~s~~g~~~~a~~~~~~~~i~~~~~~~~dvViIDEaqfl~~--~~v~~ 100 (191)
T 1xx6_A 24 ELIRRIRRAKIAKQKIQVFKPEIDNR-YSKEDVVSHMGEKEQAVAIKNSREILKYFEEDTEVIAIDEVQFFDD--EIVEI 100 (191)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC--------CEEECTTSCEEECEEESSSTHHHHHCCTTCSEEEECSGGGSCT--HHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEeccCcc-chHHHHHhhcCCceeeEeeCCHHHHHHHHhccCCEEEEECCCCCCH--HHHHH
Confidence 44456777767777887765433211 0112445555665544444455566666665678888875544211 11455
Q ss_pred HHHHHHHcCCEEEEe
Q 022194 161 IAEMAHAHGALLLVD 175 (301)
Q Consensus 161 l~~l~~~~~~~li~D 175 (301)
+.+++.+ ++.+|+=
T Consensus 101 l~~l~~~-~~~Vi~~ 114 (191)
T 1xx6_A 101 VNKIAES-GRRVICA 114 (191)
T ss_dssp HHHHHHT-TCEEEEE
T ss_pred HHHHHhC-CCEEEEE
Confidence 5555554 8888873
No 275
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=60.52 E-value=19 Score=29.82 Aligned_cols=98 Identities=11% Similarity=0.172 Sum_probs=55.9
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhc--ccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT--PKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVES 147 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~--~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~ 147 (301)
.+++|+|+..+ .++..+++.|.+|++..-.-........... ...++.+...+..|.+.++++++. .+.+|+-..
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 86 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFA 86 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEECc
Confidence 57777777555 4666778888888765432222211111111 123567777777789988888863 566666544
Q ss_pred CCCCccccc------------cHHHHHHHHHHcCC
Q 022194 148 PTNPRQQIC------------DIRKIAEMAHAHGA 170 (301)
Q Consensus 148 ~~np~G~~~------------~l~~l~~l~~~~~~ 170 (301)
.....+... -...+++.+++.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 87 ALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccCccccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 333222111 13457778888764
No 276
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=60.50 E-value=28 Score=27.46 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=42.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc--EEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~--~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| .....+++.|.+|++....-......+...++..+. .+...+..|.+++++.++ .++.
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 84 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLD 84 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887666 366678888988876433221222111122223333 444555567777776664 3567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 85 ~lv~nAg 91 (246)
T 3osu_A 85 VLVNNAG 91 (246)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665433
No 277
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=60.49 E-value=5.5 Score=35.32 Aligned_cols=83 Identities=11% Similarity=0.033 Sum_probs=51.4
Q ss_pred CCCCeEEEcCCCCccHHHH---HhhhcccCCcEEEEecCCCHH-----HHHhhcC--CCceEEEEeCCCCCccccccHHH
Q 022194 91 GTGEEIVAGDDLYGGTDRL---LSRVTPKTGVVVKRVNTCDLD-----EVASAIG--PWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 91 ~~g~~Vlv~~~~y~~~~~~---~~~~~~~~g~~~~~~~~~d~~-----~l~~~l~--~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
.+|+.|++.-..+. +..+ +...++..|+..+++++.... ....... .... + .+....|+..++++
T Consensus 7 ~~g~~~i~~~f~W~-w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~d--y--~i~~~~Gt~~df~~ 81 (496)
T 4gqr_A 7 QQGRTSIVHLFEWR-WVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVS--Y--KLCTRSGNEDEFRN 81 (496)
T ss_dssp CTTCCEEEEETTCC-HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC--S--CSCBTTBCHHHHHH
T ss_pred CCCCcEEEEecCCC-HHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccC--c--eeCCCCCCHHHHHH
Confidence 35666776555543 3332 234578888888888864110 0000000 0011 1 24556788899999
Q ss_pred HHHHHHHcCCEEEEeCCc
Q 022194 161 IAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~~ 178 (301)
|++-||++|+.||+|-++
T Consensus 82 lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 82 MVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHCCCEEEEEEcc
Confidence 999999999999999995
No 278
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=60.39 E-value=16 Score=32.20 Aligned_cols=92 Identities=11% Similarity=0.095 Sum_probs=64.1
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC--CCHHHHHhhcCCC-ceEEEEeCCCCCcccccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICD 157 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~--~d~~~l~~~l~~~-~~~v~i~~~~np~G~~~~ 157 (301)
+++..+..++.+-+.+.+.+|....-...|..+.+...+.+.-=+. .+..++.+.+..+ ..+|.+. + |-.|.+.+
T Consensus 274 e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iK-v-~qiGGite 351 (439)
T 2akz_A 274 QLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLK-V-NQIGSVTE 351 (439)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHH
T ss_pred HHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEec-h-hhcCCHHH
Confidence 3444555566555678899997766666666666666666654342 3788888888755 4454433 3 44799999
Q ss_pred HHHHHHHHHHcCCEEEE
Q 022194 158 IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~ 174 (301)
..+++++|+++|+.+++
T Consensus 352 a~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 352 AIQACKLAQENGWGVMV 368 (439)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCeEEe
Confidence 99999999999997765
No 279
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=60.32 E-value=25 Score=28.44 Aligned_cols=77 Identities=9% Similarity=0.059 Sum_probs=43.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.............. .+.+...+..|.+++++.++ ..+.
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 107 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID 107 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887666 4666788889888775443222222222222222 34455556668777766664 3667
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 108 ~lv~nAg 114 (277)
T 4fc7_A 108 ILINCAA 114 (277)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 7665433
No 280
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=60.30 E-value=30 Score=27.85 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=42.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc--EEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~--~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-..-...+...++..+. .....+..|.+++++.++ ..+.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 111 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLD 111 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 567788887666 356678888988876532211111111122233343 444455557777766664 3566
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 112 ~lvnnAg 118 (271)
T 3v2g_A 112 ILVNSAG 118 (271)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665433
No 281
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=60.19 E-value=32 Score=25.81 Aligned_cols=92 Identities=13% Similarity=0.056 Sum_probs=51.9
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.+++++|+..+ .++..+++.|.+|.+..-.-... ......++.+...+..|.+.+++.++. ..+|+.+....
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~vi~~a~~~ 78 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-----PSEGPRPAHVVVGDVLQAADVDKTVAG-QDAVIVLLGTR 78 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS-----CSSSCCCSEEEESCTTSHHHHHHHHTT-CSEEEECCCCT
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc-----ccccCCceEEEEecCCCHHHHHHHHcC-CCEEEECccCC
Confidence 46666666444 45666777788776543221111 111134677778888899999888864 56655443322
Q ss_pred Cccc-----cccHHHHHHHHHHcCC
Q 022194 151 PRQQ-----ICDIRKIAEMAHAHGA 170 (301)
Q Consensus 151 p~G~-----~~~l~~l~~l~~~~~~ 170 (301)
..-. +.-...+++.+++.++
T Consensus 79 ~~~~~~~~n~~~~~~~~~~~~~~~~ 103 (206)
T 1hdo_A 79 NDLSPTTVMSEGARNIVAAMKAHGV 103 (206)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHTC
T ss_pred CCCCccchHHHHHHHHHHHHHHhCC
Confidence 1101 1124567777877654
No 282
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=59.55 E-value=34 Score=28.33 Aligned_cols=94 Identities=14% Similarity=0.137 Sum_probs=52.6
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc-CCcEEEEecCCCHHHHHhhcCC-CceEEEEeCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-TGVVVKRVNTCDLDEVASAIGP-WTKLVWVESP 148 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~-~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~ 148 (301)
.+++++|+..+ .++..+++.|.+|++.+-.-.... ..... .++.+...+..|.+.++++++. ++.+|+-+..
T Consensus 23 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR----EHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch----hhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence 46677666444 455667777888775432211111 11111 3667777787888888887763 4666665433
Q ss_pred CCCccc---------cccHHHHHHHHHHcCC
Q 022194 149 TNPRQQ---------ICDIRKIAEMAHAHGA 170 (301)
Q Consensus 149 ~np~G~---------~~~l~~l~~l~~~~~~ 170 (301)
....+. +.-...+++.|++.++
T Consensus 99 ~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 129 (333)
T 2q1w_A 99 SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNV 129 (333)
T ss_dssp CCSCTTCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ecCCCccCChHHHHHHHHHHHHHHHHHHhCC
Confidence 222211 1114567888888764
No 283
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=59.09 E-value=35 Score=26.35 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=47.9
Q ss_pred HHHHhhhcccCCcEEEEecCC-CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcC----CEEEEe
Q 022194 107 DRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG----ALLLVD 175 (301)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~----~~li~D 175 (301)
.......++..|.+++.+..+ +.+++.+.+. .++.+|.++.... .....++++++.+++.+ +.+++=
T Consensus 105 ~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 105 KNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLT--TTMMNMKSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp HHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSG--GGTHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 444567788999999988875 6777776665 5788888876543 34567888888888764 555553
No 284
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=59.04 E-value=35 Score=26.74 Aligned_cols=77 Identities=10% Similarity=0.094 Sum_probs=43.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++++|+..+ ..+..+++.|.+|++..-.-...............+.+...+..|.+.+++.++ ..+.++
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 86 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL 86 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467888887665 356667778888876543211111111122112356666777778877776664 256776
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 87 i~~Ag 91 (251)
T 1zk4_A 87 VNNAG 91 (251)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65543
No 285
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=58.80 E-value=18 Score=27.89 Aligned_cols=90 Identities=11% Similarity=0.037 Sum_probs=53.6
Q ss_pred eEEecchHHHH--HHHHhcc-CCCCeEEEcCCCCccHHHHHhhhc-ccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCC
Q 022194 73 ALCFTSGMAAL--AAVTHLL-GTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~-~~g~~Vlv~~~~y~~~~~~~~~~~-~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~ 148 (301)
.+++++|+..+ ..+..++ +.|.+|.+..-.-.. .++... ...++.+...+..|.+.+++.++ ...+|+.+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vv~~ag 82 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKT---RIPPEIIDHERVTVIEGSFQNPGXLEQAVT-NAEVVFVGAM 82 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHH---HSCHHHHTSTTEEEEECCTTCHHHHHHHHT-TCSEEEESCC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccc---cchhhccCCCceEEEECCCCCHHHHHHHHc-CCCEEEEcCC
Confidence 36666666444 4556677 688887764322110 111111 34567777778889999998886 5566664433
Q ss_pred CCCccccccHHHHHHHHHHcCC
Q 022194 149 TNPRQQICDIRKIAEMAHAHGA 170 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~ 170 (301)
.. .+. .+.+++.+++.+.
T Consensus 83 ~~---n~~-~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 83 ES---GSD-MASIVKALSRXNI 100 (221)
T ss_dssp CC---HHH-HHHHHHHHHHTTC
T ss_pred CC---Chh-HHHHHHHHHhcCC
Confidence 21 122 7778888888764
No 286
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=58.76 E-value=42 Score=26.83 Aligned_cols=80 Identities=9% Similarity=0.062 Sum_probs=46.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc-cCCcEEEEecCCCHHHHHhhcC------CCceE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~l~------~~~~~ 142 (301)
..+++|+|+..| .....|.+.|-+|++.+-.-. ......+ ..++.....+..|.+++++.++ .++.+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEK----RSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467888888776 366778889999887654321 1222222 2234555556667777776654 35666
Q ss_pred EEEeCCCCCcccc
Q 022194 143 VWVESPTNPRQQI 155 (301)
Q Consensus 143 v~i~~~~np~G~~ 155 (301)
++-+...++.+.+
T Consensus 79 LVNNAG~~~~~~~ 91 (247)
T 3ged_A 79 LVNNACRGSKGIL 91 (247)
T ss_dssp EEECCCCCCCCGG
T ss_pred EEECCCCCCCCCc
Confidence 6544433433433
No 287
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=57.39 E-value=20 Score=28.16 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=44.6
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~ 160 (301)
+++..+.+....|.+|++..|.-..-. .-..+....|..+.-+...+.+++.+.+.++..+|++.=.+.-+ ...++.
T Consensus 44 ~lL~~a~r~~~~g~kVli~k~~~d~R~-ge~~i~s~~g~~~~a~~~~~~~~~~~~~~~~~dvViIDEaQF~~--~~~V~~ 120 (214)
T 2j9r_A 44 ELIRRVRRTQFAKQHAIVFKPCIDNRY-SEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIAIDEVQFFD--GDIVEV 120 (214)
T ss_dssp HHHHHHHHHHHTTCCEEEEECC------------------CCEEECSSGGGGGGGCCSSCCEEEECCGGGSC--TTHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEeccCCcc-hHHHHHhhcCCeeEEeecCCHHHHHHHHhcCCCEEEEECcccCC--HHHHHH
Confidence 445577777777788887765432110 00133444455544444455556665555557788887555521 112444
Q ss_pred HHHHHHHcCCEEEEeCC
Q 022194 161 IAEMAHAHGALLLVDNS 177 (301)
Q Consensus 161 l~~l~~~~~~~li~D~~ 177 (301)
|..++. .|+.+|+=.-
T Consensus 121 l~~l~~-~~~~Vi~~Gl 136 (214)
T 2j9r_A 121 VQVLAN-RGYRVIVAGL 136 (214)
T ss_dssp HHHHHH-TTCEEEEEEC
T ss_pred HHHHhh-CCCEEEEEec
Confidence 444444 4888877443
No 288
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=57.31 E-value=43 Score=26.76 Aligned_cols=77 Identities=13% Similarity=0.108 Sum_probs=44.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++....-......+...... ..+.+..++..|.+.+++.++ .++.
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 105 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVD 105 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 577888888666 366778888988877542222221111111222 235666666668777766654 3667
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 106 ~li~nAg 112 (269)
T 3gk3_A 106 VLINNAG 112 (269)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665543
No 289
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=57.26 E-value=28 Score=27.95 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=42.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++....-......+...++..+ +.+..++..|.+++++.++ ..+.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 107 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVD 107 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 567788887666 35666788898887642222222222222223333 3444555668777776664 3566
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 108 ~lvnnAG 114 (267)
T 3u5t_A 108 VLVNNAG 114 (267)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665443
No 290
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=57.04 E-value=46 Score=27.57 Aligned_cols=86 Identities=19% Similarity=0.043 Sum_probs=52.5
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCC-C
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP-T 149 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~-~ 149 (301)
.+++++|+.-+ .++..+++.|.+|++.+-.-. ..++.+...+..|.+.+++++. ++.+|+-... .
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-~~d~vih~A~~~ 88 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS-----------GTGGEEVVGSLEDGQALSDAIM-GVSAVLHLGAFM 88 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC-----------SSCCSEEESCTTCHHHHHHHHT-TCSEEEECCCCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC-----------CCCccEEecCcCCHHHHHHHHh-CCCEEEECCccc
Confidence 56777776444 466667777877765432211 1456777788889999998887 5666654432 2
Q ss_pred CCcccc---------ccHHHHHHHHHHcCC
Q 022194 150 NPRQQI---------CDIRKIAEMAHAHGA 170 (301)
Q Consensus 150 np~G~~---------~~l~~l~~l~~~~~~ 170 (301)
...... .-...+++.|++.++
T Consensus 89 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 118 (347)
T 4id9_A 89 SWAPADRDRMFAVNVEGTRRLLDAASAAGV 118 (347)
T ss_dssp CSSGGGHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 221111 113568888888875
No 291
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=56.99 E-value=33 Score=27.26 Aligned_cols=76 Identities=9% Similarity=0.107 Sum_probs=44.0
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-......+....+..+ +.+...+..|.+++++.++ .++.
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 87 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKID 87 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 467888887666 46667888888887653222222222233333333 4555566668877776664 3566
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 88 ~lv~~A 93 (264)
T 3i4f_A 88 FLINNA 93 (264)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 666443
No 292
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=56.88 E-value=67 Score=24.91 Aligned_cols=122 Identities=13% Similarity=0.140 Sum_probs=65.0
Q ss_pred CchHHHHHHHHHhhcCCC---ceEEecchHHHHH-HHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcE---EEEecC
Q 022194 54 NPTRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV---VKRVNT 126 (301)
Q Consensus 54 ~~~~~~l~~~l~~~~~~~---~~i~~~sG~~ai~-~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~---~~~~~~ 126 (301)
.+...++-..+.+..+.. .++=+++|+.... .+...+.++.+|+..+..- ......+..++..|.. +..+.
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~-~~~~~a~~~~~~~g~~~~~i~~~~- 115 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPES-EHQRQAKALFREAGYSPSRVRFLL- 115 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCH-HHHHHHHHHHHHTTCCGGGEEEEC-
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCcCcEEEEE-
Confidence 355666777777777766 6776777774443 3333455566777666542 2233333444444443 43333
Q ss_pred CCHHHHHhhc-CCCceEEEEeCCCCCccccc-cHHHHHHHHHHcCCEEEEeCCcCCc
Q 022194 127 CDLDEVASAI-GPWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSP 181 (301)
Q Consensus 127 ~d~~~l~~~l-~~~~~~v~i~~~~np~G~~~-~l~~l~~l~~~~~~~li~D~~~~~~ 181 (301)
.|..++...+ .+...+|++..... ... -++++.++. +.|.++++|++...|
T Consensus 116 gda~~~l~~~~~~~fD~V~~d~~~~---~~~~~l~~~~~~L-kpGG~lv~dn~~~~g 168 (221)
T 3dr5_A 116 SRPLDVMSRLANDSYQLVFGQVSPM---DLKALVDAAWPLL-RRGGALVLADALLDG 168 (221)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCTT---THHHHHHHHHHHE-EEEEEEEETTTTGGG
T ss_pred cCHHHHHHHhcCCCcCeEEEcCcHH---HHHHHHHHHHHHc-CCCcEEEEeCCCCCC
Confidence 3455554444 45677887754321 111 133333332 247888889886544
No 293
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=56.82 E-value=43 Score=26.59 Aligned_cols=76 Identities=12% Similarity=0.130 Sum_probs=42.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc---cCCcEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP---KTGVVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~---~~g~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..+ ..+..+++.|.+|++.+-.-.......+.+.. ...+.+...+..|.+.+++.++ . +
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-i 86 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-A 86 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-C
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-C
Confidence 467777777665 35666778888887654321111111111111 1145666667778887777665 3 6
Q ss_pred eEEEEeCC
Q 022194 141 KLVWVESP 148 (301)
Q Consensus 141 ~~v~i~~~ 148 (301)
.+++-+..
T Consensus 87 d~lv~~Ag 94 (260)
T 2z1n_A 87 DILVYSTG 94 (260)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 66665443
No 294
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=56.45 E-value=43 Score=26.88 Aligned_cols=76 Identities=13% Similarity=0.191 Sum_probs=41.2
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC----CcEEEEecCCCHHHHHhhcC------CC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT----GVVVKRVNTCDLDEVASAIG------PW 139 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~----g~~~~~~~~~d~~~l~~~l~------~~ 139 (301)
..+++++|+..+ .++..+++.|.+|++..-.-..... +...++.. .+.+...+..|.+.+++.++ ..
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEE-LAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHH-HHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 467777877665 3566677788888765432111111 11111111 23445556668877766654 25
Q ss_pred ceEEEEeCC
Q 022194 140 TKLVWVESP 148 (301)
Q Consensus 140 ~~~v~i~~~ 148 (301)
+.+|+-+..
T Consensus 112 iD~vi~~Ag 120 (279)
T 1xg5_A 112 VDICINNAG 120 (279)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 677665533
No 295
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=55.38 E-value=45 Score=26.51 Aligned_cols=76 Identities=16% Similarity=0.131 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEc-CCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..| .....+++.|.+|++. ...-..... ....++..+ +.+...+..|.+++++.++ .++
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALE-TAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRL 83 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467888887666 3566788889888764 332221111 112223333 4444555567777776654 356
Q ss_pred eEEEEeCC
Q 022194 141 KLVWVESP 148 (301)
Q Consensus 141 ~~v~i~~~ 148 (301)
.+++-+..
T Consensus 84 d~lv~nAg 91 (258)
T 3oid_A 84 DVFVNNAA 91 (258)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 66665543
No 296
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=54.75 E-value=45 Score=26.29 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=43.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+..-.... ......+ +.....+..|.+++++.++ ..+.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAK----AAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH----HHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 467778887666 466677888988887654322222 2222223 3444445557777766654 3667
Q ss_pred EEEEeCCCCC
Q 022194 142 LVWVESPTNP 151 (301)
Q Consensus 142 ~v~i~~~~np 151 (301)
+++-+....+
T Consensus 83 ~lv~nAg~~~ 92 (247)
T 3rwb_A 83 ILVNNASIVP 92 (247)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 7665544333
No 297
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=54.68 E-value=17 Score=29.76 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=43.0
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEE--EEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~--~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-...........+..+.++ ...+..|.+++++.++ ..+.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 127 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887666 35667788898887654332222222223334444444 4445557777766654 3566
Q ss_pred EEEEe
Q 022194 142 LVWVE 146 (301)
Q Consensus 142 ~v~i~ 146 (301)
+++-+
T Consensus 128 ~lvnn 132 (291)
T 3ijr_A 128 ILVNN 132 (291)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66644
No 298
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=53.86 E-value=45 Score=23.74 Aligned_cols=44 Identities=11% Similarity=0.185 Sum_probs=31.0
Q ss_pred CCCHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 022194 126 TCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 126 ~~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D 175 (301)
-+..+.+..++. .++.+|+++.... +-+++.++|+++|++++.=
T Consensus 60 G~r~~~~l~a~~~~~~~~iIlt~g~~------~~~~i~~~A~~~~ipvl~t 104 (139)
T 2ioj_A 60 GDRSDLLLTALEMPNVRCLILTGNLE------PVQLVLTKAEERGVPVILT 104 (139)
T ss_dssp TTCHHHHHHHTTCTTEEEEEEETTCC------CCHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHHHHHHhCCCCcEEEEcCCCC------CCHHHHHHHHHCCCeEEEE
Confidence 344455556676 6788888875544 4478889999999887753
No 299
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=53.78 E-value=89 Score=25.41 Aligned_cols=103 Identities=10% Similarity=0.102 Sum_probs=56.2
Q ss_pred hhcCCCceEEe-cchHHHHHHHHhccC--CCCeEEE--cCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCc
Q 022194 66 KLDKADRALCF-TSGMAALAAVTHLLG--TGEEIVA--GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWT 140 (301)
Q Consensus 66 ~~~~~~~~i~~-~sG~~ai~~~~~~~~--~g~~Vlv--~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~ 140 (301)
+++...+.+++ ++++.++..+..+.+ ..-+|++ +.|.+.+. ..... +...|+++..+.......+. +++
T Consensus 105 ~~I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~-~~a~~-L~~~gI~vtli~dsa~~~~m----~~v 178 (276)
T 1vb5_A 105 QLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGL-HLARE-LEFSGIEFEVITDAQMGLFC----REA 178 (276)
T ss_dssp HHCCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHH-HHHHH-HHHTTCCEEEECGGGHHHHH----TTC
T ss_pred HHccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhH-HHHHH-HHHCCCCEEEEcHHHHHHHH----ccC
Confidence 34443455663 333444455544433 3345776 34666653 22223 33478999888833333333 356
Q ss_pred eEEEEe-CCCCCcccccc---HHHHHHHHHHcCCEEEE
Q 022194 141 KLVWVE-SPTNPRQQICD---IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 141 ~~v~i~-~~~np~G~~~~---l~~l~~l~~~~~~~li~ 174 (301)
..|++. ..-...|.+.. --.++..|+.+++++++
T Consensus 179 d~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 179 SIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp SEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred CEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 666653 33334455432 56688899999987777
No 300
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=53.76 E-value=64 Score=25.66 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=42.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCcc--HHHHHhhhcccCCcEEEEe--cCCCHHHHHhhcC------CC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG------PW 139 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~--~~~~~~~~~~~~g~~~~~~--~~~d~~~l~~~l~------~~ 139 (301)
..+++|+|+..| ..+..+++.|.+|++....-.. ....+...++..+.++..+ +..|.+++++.++ ..
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 91 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGK 91 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467788887666 4667788889888874321111 1111112223335455444 4557777776664 35
Q ss_pred ceEEEEeCC
Q 022194 140 TKLVWVESP 148 (301)
Q Consensus 140 ~~~v~i~~~ 148 (301)
+.+++-+..
T Consensus 92 iD~lvnnAg 100 (262)
T 3ksu_A 92 VDIAINTVG 100 (262)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 666665433
No 301
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=53.73 E-value=18 Score=30.60 Aligned_cols=96 Identities=10% Similarity=0.006 Sum_probs=54.8
Q ss_pred eEEecchHHHH--HHHHhccCC-CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-CHHHHHhhcCCCceEEEEeCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESP 148 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~-g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~~~~~~v~i~~~ 148 (301)
.+++++|+.-+ .++..+++. |.+|.+..-.-... .......++++...+.. |.+.++++++ ++.+|+-...
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-~~d~Vih~A~ 100 (372)
T 3slg_A 26 KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL----GDLVKHERMHFFEGDITINKEWVEYHVK-KCDVILPLVA 100 (372)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT----GGGGGSTTEEEEECCTTTCHHHHHHHHH-HCSEEEECBC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh----hhhccCCCeEEEeCccCCCHHHHHHHhc-cCCEEEEcCc
Confidence 46666665443 455566665 77776544322211 13334467888888888 8888888876 4566654332
Q ss_pred -CCCcccc-----------ccHHHHHHHHHHcCCEEE
Q 022194 149 -TNPRQQI-----------CDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 149 -~np~G~~-----------~~l~~l~~l~~~~~~~li 173 (301)
..+.... .-...|++.|++.+..+|
T Consensus 101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v 137 (372)
T 3slg_A 101 IATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLV 137 (372)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEE
T ss_pred cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 2221110 113568888888775444
No 302
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=53.36 E-value=22 Score=29.01 Aligned_cols=93 Identities=13% Similarity=0.073 Sum_probs=53.5
Q ss_pred EEecchHHH--HHHHHhccCCCCeEEE-cCCCCc----cHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEe
Q 022194 74 LCFTSGMAA--LAAVTHLLGTGEEIVA-GDDLYG----GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (301)
Q Consensus 74 i~~~sG~~a--i~~~~~~~~~g~~Vlv-~~~~y~----~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~ 146 (301)
+++++|+.. -..+..+++.|..|.+ ....-. .....+ ......++++...+..|.+.+.++++. ..+|+.+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~~-~d~vi~~ 84 (308)
T 1qyc_A 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLL-ESFKASGANIVHGSIDDHASLVEAVKN-VDVVIST 84 (308)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHH-HHHHTTTCEEECCCTTCHHHHHHHHHT-CSEEEEC
T ss_pred EEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHH-HHHHhCCCEEEEeccCCHHHHHHHHcC-CCEEEEC
Confidence 556665533 3455666667766654 333211 111111 112346788888888899999988864 5666544
Q ss_pred CCCCCccccccHHHHHHHHHHcC-CE
Q 022194 147 SPTNPRQQICDIRKIAEMAHAHG-AL 171 (301)
Q Consensus 147 ~~~np~G~~~~l~~l~~l~~~~~-~~ 171 (301)
.... .+.....+++.|++.+ +-
T Consensus 85 a~~~---~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 85 VGSL---QIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp CCGG---GSGGGHHHHHHHHHHCCCS
T ss_pred Ccch---hhhhHHHHHHHHHhcCCCc
Confidence 3321 1334577889998887 53
No 303
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=53.29 E-value=18 Score=31.75 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=62.3
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEec--CCCHHHHHhhcCCC-ceEEEEeCCCCCcccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVN--TCDLDEVASAIGPW-TKLVWVESPTNPRQQI 155 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~--~~d~~~l~~~l~~~-~~~v~i~~~~np~G~~ 155 (301)
+++..+..++.+-+.+.+.+|....-...|..+.+..+ +.+.-=+ ..+..++.+.+..+ ..+|.+. -|-.|.+
T Consensus 267 eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK--v~~iGGi 344 (428)
T 3tqp_A 267 EMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK--LNQIGTL 344 (428)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC--HHHHCCH
T ss_pred HHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEec--ccccCCH
Confidence 55666666666656788999976655555656655555 3332111 22788888887644 4444433 3447999
Q ss_pred ccHHHHHHHHHHcCCEEEEeC
Q 022194 156 CDIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~ 176 (301)
.+..+++++|+++|+.+++=.
T Consensus 345 Tealkia~lA~~~G~~~~v~H 365 (428)
T 3tqp_A 345 TETLATVGLAKSNKYGVIISH 365 (428)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEeC
Confidence 999999999999999876643
No 304
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=53.25 E-value=54 Score=28.07 Aligned_cols=67 Identities=10% Similarity=-0.035 Sum_probs=43.4
Q ss_pred ccCCCCeEEEcCCCCccH------HHHHhhhcccCCcEEEEecCC-------------CHHHHHhhcC-CCceEEEEeCC
Q 022194 89 LLGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~------~~~~~~~~~~~g~~~~~~~~~-------------d~~~l~~~l~-~~~~~v~i~~~ 148 (301)
.+++||+|.+..|+.... .......++..|.+++.-+.. -.++|.+++. +++++|+....
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 477899999888886532 111234567789998877642 2566777776 67888887655
Q ss_pred CCCcccc
Q 022194 149 TNPRQQI 155 (301)
Q Consensus 149 ~np~G~~ 155 (301)
.+-+-.+
T Consensus 119 Gyga~rl 125 (371)
T 3tla_A 119 GDNSNSL 125 (371)
T ss_dssp CSCGGGG
T ss_pred cccHHHH
Confidence 4433333
No 305
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=53.18 E-value=57 Score=26.82 Aligned_cols=92 Identities=9% Similarity=-0.007 Sum_probs=50.7
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.+++++|+.-+ .++..+++.|.+|.+..-.-... ..+...++++...+..|.+.++++++ .+.+|+-+....
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~l~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vih~a~~~ 88 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI-----QRLAYLEPECRVAEMLDHAGLERALR-GLDGVIFSAGYY 88 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG-----GGGGGGCCEEEECCTTCHHHHHHHTT-TCSEEEEC----
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh-----hhhccCCeEEEEecCCCHHHHHHHHc-CCCEEEECCccC
Confidence 36777766444 45666777788776543221111 11122367787888889999998886 466665543321
Q ss_pred Cc--cccc--------cHHHHHHHHHHcCC
Q 022194 151 PR--QQIC--------DIRKIAEMAHAHGA 170 (301)
Q Consensus 151 p~--G~~~--------~l~~l~~l~~~~~~ 170 (301)
.. .... -...+++.|++.++
T Consensus 89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 118 (342)
T 2x4g_A 89 PSRPRRWQEEVASALGQTNPFYAACLQARV 118 (342)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11 1111 13567888887764
No 306
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=52.98 E-value=19 Score=30.07 Aligned_cols=98 Identities=10% Similarity=0.054 Sum_probs=53.4
Q ss_pred eEEecchHHHH--HHHHhccCCC--CeEEEcCC-CCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEe
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTG--EEIVAGDD-LYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g--~~Vlv~~~-~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~ 146 (301)
.+++++|+..+ .++..+++.| -.|++.+. ........+.......++.+...+..|.+.++++++. ++.+|+-.
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 105 (346)
T 4egb_A 26 NILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNF 105 (346)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEEC
T ss_pred eEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEEC
Confidence 46777776444 4556677666 45554322 2111111111222335778888888899999888864 46666654
Q ss_pred CCCCCcccc-c-----------cHHHHHHHHHHcCC
Q 022194 147 SPTNPRQQI-C-----------DIRKIAEMAHAHGA 170 (301)
Q Consensus 147 ~~~np~G~~-~-----------~l~~l~~l~~~~~~ 170 (301)
......+.. . -...+++.|++.++
T Consensus 106 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 141 (346)
T 4egb_A 106 AAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH 141 (346)
T ss_dssp CCCC---------CHHHHHHTHHHHHHHHHHHHSTT
T ss_pred CcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 332221111 0 14568888988874
No 307
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=52.90 E-value=43 Score=28.32 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=52.7
Q ss_pred eEEecchHHHH--HHHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
.+++++|+..+ .++..+++.| .+|.+....-.... .......++.+...+..|.+.++++++ .+.+|+-....
T Consensus 34 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~l~~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vih~A~~ 109 (377)
T 2q1s_A 34 NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK---INVPDHPAVRFSETSITDDALLASLQD-EYDYVFHLATY 109 (377)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG---GGSCCCTTEEEECSCTTCHHHHHHCCS-CCSEEEECCCC
T ss_pred EEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch---hhccCCCceEEEECCCCCHHHHHHHhh-CCCEEEECCCc
Confidence 46777766444 4566677778 77776543221111 011113456666677778999988886 56666654333
Q ss_pred CCccc-c-----------ccHHHHHHHHHHc-CC
Q 022194 150 NPRQQ-I-----------CDIRKIAEMAHAH-GA 170 (301)
Q Consensus 150 np~G~-~-----------~~l~~l~~l~~~~-~~ 170 (301)
..... . .-...|++.|++. ++
T Consensus 110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~ 143 (377)
T 2q1s_A 110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL 143 (377)
T ss_dssp SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSC
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22111 0 1145577888877 64
No 308
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=52.83 E-value=15 Score=32.41 Aligned_cols=94 Identities=13% Similarity=0.051 Sum_probs=64.0
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecC--CCHHHHHhhcCC-CceEEEEeCCCCCcccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQI 155 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~--~d~~~l~~~l~~-~~~~v~i~~~~np~G~~ 155 (301)
+++..+..++++-..+.+.+|....-...|..+.+..+ +.+.-=+. .+++.++..+.. ...++.+- .|-.|.+
T Consensus 285 Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIK--vnQIGgI 362 (452)
T 3otr_A 285 KLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLK--VNQIGSV 362 (452)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC--HHHHCCH
T ss_pred HHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEee--ccccccH
Confidence 55556666666556788989976665666666666666 55533332 368888887763 44455443 3447889
Q ss_pred ccHHHHHHHHHHcCCEEEEeC
Q 022194 156 CDIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~ 176 (301)
.+.-+++++|+++|..+++=.
T Consensus 363 TEalka~~lA~~~G~~vmvsh 383 (452)
T 3otr_A 363 TEAIEACLLAQKSGWGVQVSH 383 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEeC
Confidence 999999999999998877643
No 309
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=52.56 E-value=50 Score=26.86 Aligned_cols=80 Identities=13% Similarity=0.227 Sum_probs=45.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| .....|.+.|-+|++.+-.-. .++...+..+ ......+..|.+++++.++ .++.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~----~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKD----VLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777666 466778899998887654322 2223333333 3444455557777776654 3566
Q ss_pred EEEEeCCCCCcccc
Q 022194 142 LVWVESPTNPRQQI 155 (301)
Q Consensus 142 ~v~i~~~~np~G~~ 155 (301)
+++-+...++.+.+
T Consensus 106 iLVNNAG~~~~~~~ 119 (273)
T 4fgs_A 106 VLFVNAGGGSMLPL 119 (273)
T ss_dssp EEEECCCCCCCCCT
T ss_pred EEEECCCCCCCCCh
Confidence 65544333333333
No 310
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=52.45 E-value=86 Score=25.03 Aligned_cols=75 Identities=8% Similarity=0.116 Sum_probs=44.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| ..+..+++.|.+|++....-......... . ...+.+..++..|.+.+++.+. ..+.++
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA-Y-PDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-C-TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-c-cCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 467888887666 46667888898887665443333221111 1 1245666667778877776664 256666
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 84 v~~Ag 88 (281)
T 3m1a_A 84 VNNAG 88 (281)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65433
No 311
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=52.43 E-value=8.6 Score=33.89 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=27.1
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 148 PTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 148 ~~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
++...|...+++++++.||++|+-||+|-++
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 3445688889999999999999999999995
No 312
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=52.42 E-value=28 Score=30.46 Aligned_cols=95 Identities=9% Similarity=0.006 Sum_probs=62.9
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEec--CCCHHHHHhhcCCC-ceEEEEeCCCCCcccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVN--TCDLDEVASAIGPW-TKLVWVESPTNPRQQI 155 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~--~~d~~~l~~~l~~~-~~~v~i~~~~np~G~~ 155 (301)
+++..+..+.++-+...+.+|....-...+..+.+.. .+.+..=+ ..+..++.+.+..+ ..+|.+. + +-.|.+
T Consensus 271 ~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGi 348 (431)
T 2fym_A 271 EFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIK-F-NQIGSL 348 (431)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-G-GGTCSH
T ss_pred HHHHHHHHHHHhCCceEEECCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEEC-c-cccCCH
Confidence 5555555554433577899998766555555555554 45554333 23778888888644 4555543 3 447999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCC
Q 022194 156 CDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~~ 177 (301)
.+..+++++|+++|+.+++-..
T Consensus 349 te~~~i~~~A~~~g~~~~~~h~ 370 (431)
T 2fym_A 349 TETLAAIKMAKDAGYTAVISHR 370 (431)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHCCCeEEEeCC
Confidence 9999999999999998876443
No 313
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=52.42 E-value=54 Score=26.44 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=43.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.......... ...+....++..|.+.+++.++ ..+.++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467888887665 456677888988887653322222111111 2235566667778877766654 356776
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 108 vnnAg 112 (277)
T 3gvc_A 108 VANAG 112 (277)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65533
No 314
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=52.31 E-value=34 Score=25.27 Aligned_cols=60 Identities=12% Similarity=0.102 Sum_probs=43.4
Q ss_pred HHHHhhhcccCCcEEEEecCC-CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 107 DRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
.......++..|.+++....+ +++++.+.+. .++.+|.++.... .....++++++.+++.
T Consensus 35 ~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~--~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 35 AKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNG--AHLHLMKRLMAKLREL 96 (161)
T ss_dssp HHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSS--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeech--hhHHHHHHHHHHHHhc
Confidence 344567788899999988764 6777766655 6788888875544 3456688888888875
No 315
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=52.25 E-value=18 Score=31.89 Aligned_cols=94 Identities=14% Similarity=0.107 Sum_probs=62.0
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecC--CCHHHHHhhcCCC-ceEEEEeCCCCCcccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQI 155 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~--~d~~~l~~~l~~~-~~~v~i~~~~np~G~~ 155 (301)
+++..+..++.+-+.+.+.+|....-...|..+.+..+ +.+.-=+. .+..++++.+..+ ..+|.+. -|-.|.+
T Consensus 293 eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK--v~~iGGi 370 (449)
T 3uj2_A 293 ELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIK--LNQIGTV 370 (449)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC--HHHHCSH
T ss_pred HHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEEC--ccccCCH
Confidence 55555556666666788999976655555655555553 33322222 1588888888644 4454433 3447899
Q ss_pred ccHHHHHHHHHHcCCEEEEeC
Q 022194 156 CDIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~ 176 (301)
.+..+++++|+++|+.+++=.
T Consensus 371 Tea~kia~lA~~~Gi~~~v~H 391 (449)
T 3uj2_A 371 SETLEAIKMAHKAGYTAVVSH 391 (449)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEeC
Confidence 999999999999999876643
No 316
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=51.71 E-value=63 Score=25.79 Aligned_cols=75 Identities=8% Similarity=0.016 Sum_probs=41.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEc-CCCCccHHHHHhhhcccCCcEE--EEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~y~~~~~~~~~~~~~~g~~~--~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..| ..+..+++.|.+|++. ... ......+...+...+.++ ...+..|.+++++.++ ..+
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 105 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN-REAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL 105 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC-hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 578888888666 3666788889888654 222 111111122223334444 4445557777766654 356
Q ss_pred eEEEEeC
Q 022194 141 KLVWVES 147 (301)
Q Consensus 141 ~~v~i~~ 147 (301)
.+++-+.
T Consensus 106 d~li~nA 112 (272)
T 4e3z_A 106 DGLVNNA 112 (272)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 317
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=51.66 E-value=32 Score=28.90 Aligned_cols=67 Identities=13% Similarity=0.034 Sum_probs=43.1
Q ss_pred ccCCCCeEEEcCCCCcc------HHHHHhhhcccCCcEEEEecCC-------------CHHHHHhhcC-CCceEEEEeCC
Q 022194 89 LLGTGEEIVAGDDLYGG------TDRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~------~~~~~~~~~~~~g~~~~~~~~~-------------d~~~l~~~l~-~~~~~v~i~~~ 148 (301)
.+++||+|-+..|+... ........++..|.+++.-+.. -.+++.+++. +++++|+....
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 47899999988887542 1222235567889999877642 2456666664 67888887655
Q ss_pred CCCcccc
Q 022194 149 TNPRQQI 155 (301)
Q Consensus 149 ~np~G~~ 155 (301)
..-+-.+
T Consensus 88 G~g~~rl 94 (327)
T 4h1h_A 88 GFNSNQL 94 (327)
T ss_dssp CSCGGGG
T ss_pred chhHHHH
Confidence 4433344
No 318
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=51.58 E-value=52 Score=27.84 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=52.9
Q ss_pred eEEecchHHHH--HHHHhcc-CCCCeEEEcCCCCccH--------HHHH----hhhcc---cCC---cEEEEecCCCHHH
Q 022194 73 ALCFTSGMAAL--AAVTHLL-GTGEEIVAGDDLYGGT--------DRLL----SRVTP---KTG---VVVKRVNTCDLDE 131 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~-~~g~~Vlv~~~~y~~~--------~~~~----~~~~~---~~g---~~~~~~~~~d~~~ 131 (301)
.+++++|+.-+ .++..++ +.|.+|++.+..-... ...+ +.... ..+ +.+...+..|.+.
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 83 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF 83 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHH
Confidence 36677776444 4566677 7788877543221111 1111 11111 113 6777778888888
Q ss_pred HHhhcC--CCceEEEEeCCCCCccc-cc-----------cHHHHHHHHHHcCC
Q 022194 132 VASAIG--PWTKLVWVESPTNPRQQ-IC-----------DIRKIAEMAHAHGA 170 (301)
Q Consensus 132 l~~~l~--~~~~~v~i~~~~np~G~-~~-----------~l~~l~~l~~~~~~ 170 (301)
+++++. ..+.+|+-+......+. .. -...+++.|++.++
T Consensus 84 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 136 (397)
T 1gy8_A 84 LNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKC 136 (397)
T ss_dssp HHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCC
Confidence 888876 34777765543322211 11 13447777887764
No 319
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=51.46 E-value=97 Score=27.24 Aligned_cols=123 Identities=16% Similarity=0.197 Sum_probs=65.6
Q ss_pred HHHHHHHHHhhcCC----------CceEEe----cch-HHHH-HHHHhccCCCCeEEE--cCCCCccHHHHHhhhcccCC
Q 022194 57 RDALESLLAKLDKA----------DRALCF----TSG-MAAL-AAVTHLLGTGEEIVA--GDDLYGGTDRLLSRVTPKTG 118 (301)
Q Consensus 57 ~~~l~~~l~~~~~~----------~~~i~~----~sG-~~ai-~~~~~~~~~g~~Vlv--~~~~y~~~~~~~~~~~~~~g 118 (301)
...+.+.+.++++. +..+++ ++| |..+ .++..+.+.|.+|++ .++...+....+.......+
T Consensus 76 ~~~l~~eL~~~L~~~~~~~~~~~~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~g 155 (443)
T 3dm5_A 76 IKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYH 155 (443)
T ss_dssp HHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhcCcccccccCCCCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhcC
Confidence 45666777776653 123333 223 3333 344445566776653 33444444455556667778
Q ss_pred cEEEEecCC-CHHH-----HHhhcCCCceEEEEeCCCCCccc---cccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 119 VVVKRVNTC-DLDE-----VASAIGPWTKLVWVESPTNPRQQ---ICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 119 ~~~~~~~~~-d~~~-----l~~~l~~~~~~v~i~~~~np~G~---~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
+.+...... |+.. ++.+-.....+|++..+....-. ...+.++.+..+...+++++|...+
T Consensus 156 vpv~~~~~~~dp~~i~~~al~~a~~~~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~g 225 (443)
T 3dm5_A 156 IEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIG 225 (443)
T ss_dssp CEEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred CcEEecCCCCCHHHHHHHHHHHHHhCCCCEEEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCCc
Confidence 877655432 4332 22222346889999866432111 1224444444444568999998764
No 320
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=50.78 E-value=46 Score=27.23 Aligned_cols=96 Identities=15% Similarity=0.106 Sum_probs=54.8
Q ss_pred EEecchHHHH--HHHHhccCCCCeEEEc-CCC-C---ccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEe
Q 022194 74 LCFTSGMAAL--AAVTHLLGTGEEIVAG-DDL-Y---GGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~-y---~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~ 146 (301)
+++++|+..+ .++..+++.|..|.+. ... - ......+. .....++++...+..|.+.+.++++. ..+|+.+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~-~~~~~~v~~v~~D~~d~~~l~~a~~~-~d~vi~~ 84 (321)
T 3c1o_A 7 IIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLRE-EFRSMGVTIIEGEMEEHEKMVSVLKQ-VDIVISA 84 (321)
T ss_dssp EEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHHTT-CSEEEEC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHH-HhhcCCcEEEEecCCCHHHHHHHHcC-CCEEEEC
Confidence 5566655333 4555566667666543 322 1 11111111 12345788888898899999999874 5666544
Q ss_pred CCCCCccccccHHHHHHHHHHcC-CEEEE
Q 022194 147 SPTNPRQQICDIRKIAEMAHAHG-ALLLV 174 (301)
Q Consensus 147 ~~~np~G~~~~l~~l~~l~~~~~-~~li~ 174 (301)
.... .+.....+++.|++.+ +--++
T Consensus 85 a~~~---~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 85 LPFP---MISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp CCGG---GSGGGHHHHHHHHHHCCCCEEE
T ss_pred CCcc---chhhHHHHHHHHHHhCCccEEe
Confidence 3221 1344578899999888 63333
No 321
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=50.76 E-value=62 Score=26.08 Aligned_cols=78 Identities=14% Similarity=0.113 Sum_probs=42.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHH-HHhhhccc--CCcEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDR-LLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~-~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-..... ........ ..+.+...+..|.+++++.++ ..+
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 105 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGA 105 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCC
Confidence 467777777666 4666788889888876542221111 11122222 234444455557777766654 356
Q ss_pred eEEEEeCCC
Q 022194 141 KLVWVESPT 149 (301)
Q Consensus 141 ~~v~i~~~~ 149 (301)
.+++-+...
T Consensus 106 D~lv~nAg~ 114 (281)
T 3v2h_A 106 DILVNNAGV 114 (281)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 676655433
No 322
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=50.51 E-value=66 Score=25.85 Aligned_cols=77 Identities=13% Similarity=0.060 Sum_probs=43.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-....... ..++..+ +.+...+..|.+++++.++ ..+.
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 467888887666 356667888988876554322222111 2222233 4455556668777766654 3566
Q ss_pred EEEEeCCC
Q 022194 142 LVWVESPT 149 (301)
Q Consensus 142 ~v~i~~~~ 149 (301)
+++-+...
T Consensus 104 ~lv~nAg~ 111 (279)
T 3sju_A 104 ILVNSAGR 111 (279)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 66655433
No 323
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=50.51 E-value=58 Score=27.47 Aligned_cols=99 Identities=13% Similarity=0.153 Sum_probs=56.3
Q ss_pred ceEEecchH-HHHHHHHhccCCC--CeEEEcC--CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEe
Q 022194 72 RALCFTSGM-AALAAVTHLLGTG--EEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (301)
Q Consensus 72 ~~i~~~sG~-~ai~~~~~~~~~g--~~Vlv~~--~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~ 146 (301)
+.+++-+.+ .++..+....+.| -+|++.+ |.+.+ . ....-+...|+++..+.......+. +++..|++-
T Consensus 143 ~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qG-r-ltA~eL~~~GI~vtlI~Dsa~~~~M----~~Vd~VivG 216 (338)
T 3a11_A 143 DVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQG-K-ITAKELASYGIPVIYVVDSAARHYM----KMTDKVVMG 216 (338)
T ss_dssp CEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHH-H-HHHHHHHHTTCCEEEECGGGTTTTG----GGCSEEEEC
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhh-H-HHHHHHHhCCCCEEEEehHHHHHHH----HhCCEEEEC
Confidence 455554434 4444554444433 4566654 56666 2 2224456678999888843233332 455666653
Q ss_pred -CCCCCcccccc---HHHHHHHHHHcCCEEEEeC
Q 022194 147 -SPTNPRQQICD---IRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 147 -~~~np~G~~~~---l~~l~~l~~~~~~~li~D~ 176 (301)
..-...|.+.. --.++-+||.+|++|++=.
T Consensus 217 Ad~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~a 250 (338)
T 3a11_A 217 ADSITVNGAVINKIGTALIALTAKEHRVWTMIAA 250 (338)
T ss_dssp CSEECTTSCEEEETTHHHHHHHHHHTTCEEEEEC
T ss_pred ccEEecCCCEeecccHHHHHHHHHHcCCCEEEec
Confidence 22234455543 4568888999999988853
No 324
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=50.45 E-value=38 Score=26.65 Aligned_cols=72 Identities=18% Similarity=0.146 Sum_probs=43.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..+ ..+..+++.|.+|++..-.-. .++...+..++.+...+..|.+.+++.++ .++.++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEG----PLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457777777665 356667788888876543211 11223333356777777778887776664 256666
Q ss_pred EEeC
Q 022194 144 WVES 147 (301)
Q Consensus 144 ~i~~ 147 (301)
+-+.
T Consensus 82 vn~A 85 (245)
T 1uls_A 82 VHYA 85 (245)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 325
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=50.45 E-value=60 Score=25.80 Aligned_cols=77 Identities=13% Similarity=0.190 Sum_probs=43.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| .....+++.|.+|++.+-.-.........+... ..+.+...+..|.+++++.++ ..+.
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 467888887666 356667888888877643322222112122111 234555666668777776654 3667
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 91 ~lvnnAg 97 (262)
T 3pk0_A 91 VVCANAG 97 (262)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665533
No 326
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=50.27 E-value=55 Score=22.85 Aligned_cols=54 Identities=7% Similarity=0.135 Sum_probs=34.2
Q ss_pred cCCcEEEEecCCCHHHHHhhcC-----------CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 022194 116 KTGVVVKRVNTCDLDEVASAIG-----------PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 116 ~~g~~~~~~~~~d~~~l~~~l~-----------~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li 173 (301)
..++.+..++..|++.+.+.+. +.+.++-+.... ...++.+|.++++++|+.++
T Consensus 14 ~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 14 SFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred eeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 4556666666677777766654 223333333332 23579999999999998774
No 327
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=50.22 E-value=37 Score=27.57 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=53.6
Q ss_pred EEecchHHHH--HHHHhccCCCCeEEE-cCCC-Cc----cHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEE
Q 022194 74 LCFTSGMAAL--AAVTHLLGTGEEIVA-GDDL-YG----GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~g~~Vlv-~~~~-y~----~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i 145 (301)
+++++|+..+ ..+..+++.|..|.+ .... -. .-...+. .+...++++...+..|.+.+.++++ .+.+|+.
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~l~~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~ 82 (307)
T 2gas_A 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELID-NYQSLGVILLEGDINDHETLVKAIK-QVDIVIC 82 (307)
T ss_dssp EEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHHT-TCSEEEE
T ss_pred EEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHH-HHHhCCCEEEEeCCCCHHHHHHHHh-CCCEEEE
Confidence 5556555333 355556666666654 3322 11 1111111 1234578888888889999999887 4566654
Q ss_pred eCCCCCccccccHHHHHHHHHHcC-CEEE
Q 022194 146 ESPTNPRQQICDIRKIAEMAHAHG-ALLL 173 (301)
Q Consensus 146 ~~~~np~G~~~~l~~l~~l~~~~~-~~li 173 (301)
+..... +.....+++.|++.| +.-+
T Consensus 83 ~a~~~~---~~~~~~l~~aa~~~g~v~~~ 108 (307)
T 2gas_A 83 AAGRLL---IEDQVKIIKAIKEAGNVKKF 108 (307)
T ss_dssp CSSSSC---GGGHHHHHHHHHHHCCCSEE
T ss_pred CCcccc---cccHHHHHHHHHhcCCceEE
Confidence 433221 344577888999887 5333
No 328
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=50.20 E-value=52 Score=25.69 Aligned_cols=75 Identities=16% Similarity=0.124 Sum_probs=43.2
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEEE
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVW 144 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v~ 144 (301)
.+++|+|+..| .....+++.|.+|++.+-.-.......... . .++.+...+..|.+++++.++ ..+.+++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-G-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-G-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-c-CCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 57778887666 356667888888876544322222111111 1 135666666668777766654 3567766
Q ss_pred EeCCC
Q 022194 145 VESPT 149 (301)
Q Consensus 145 i~~~~ 149 (301)
-+...
T Consensus 83 nnAg~ 87 (235)
T 3l6e_A 83 HCAGT 87 (235)
T ss_dssp EECCC
T ss_pred ECCCC
Confidence 55443
No 329
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=50.20 E-value=41 Score=26.56 Aligned_cols=76 Identities=18% Similarity=0.144 Sum_probs=43.2
Q ss_pred CceEEecchHHHH--HHHHhccCCCCeEEEcC-CCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC------CC
Q 022194 71 DRALCFTSGMAAL--AAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PW 139 (301)
Q Consensus 71 ~~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~-~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~ 139 (301)
+..+++|+|+..| ..+..+++.|.+|++.. ..-....... ..... ..+.+...+..|.+.+++.++ .+
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWL-EDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE 91 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHH-HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3578888888666 35667788888887643 2222222111 11222 235555666668777766654 35
Q ss_pred ceEEEEeC
Q 022194 140 TKLVWVES 147 (301)
Q Consensus 140 ~~~v~i~~ 147 (301)
+.+++-+.
T Consensus 92 id~lv~~A 99 (256)
T 3ezl_A 92 IDVLVNNA 99 (256)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 66666543
No 330
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=50.06 E-value=40 Score=23.40 Aligned_cols=89 Identities=11% Similarity=0.004 Sum_probs=48.3
Q ss_pred ceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
..++++.|.-+...+..+.+.|..|.+.+..-. . .+...+..+..+...+..+.+.+++..-.+..+|+++.+..
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~-~---~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~- 80 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD-I---CKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE- 80 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH-H---HHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH-
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH-H---HHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc-
Confidence 356777776555555555566777776554311 1 12222334666655566677777655334677777775432
Q ss_pred ccccccHHHHHHHHHHcC
Q 022194 152 RQQICDIRKIAEMAHAHG 169 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~ 169 (301)
..-..+..++++.+
T Consensus 81 ----~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 81 ----EVNLMSSLLAKSYG 94 (140)
T ss_dssp ----HHHHHHHHHHHHTT
T ss_pred ----hHHHHHHHHHHHcC
Confidence 11124555666654
No 331
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=50.04 E-value=74 Score=25.08 Aligned_cols=76 Identities=11% Similarity=0.101 Sum_probs=42.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEE--EEecCCCHHHHHhhcC-----CCceE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG-----PWTKL 142 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~--~~~~~~d~~~l~~~l~-----~~~~~ 142 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-....... ..++..+.++ ...+..|.+++++.++ ..+.+
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~ 86 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-AEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEV 86 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceE
Confidence 467777877666 356677888888877654333322222 2222224444 4445557777766654 35566
Q ss_pred EEEeCC
Q 022194 143 VWVESP 148 (301)
Q Consensus 143 v~i~~~ 148 (301)
++-+..
T Consensus 87 lv~nAg 92 (252)
T 3h7a_A 87 TIFNVG 92 (252)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 655433
No 332
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=50.01 E-value=33 Score=27.50 Aligned_cols=77 Identities=10% Similarity=0.056 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc--cCCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-.........+.+ ...+.+...+..|.+.+++.++ ..+.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 567888887666 35667788888887754432222211112211 1234455555557666655543 3667
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 101 ~lv~nAg 107 (266)
T 4egf_A 101 VLVNNAG 107 (266)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 7765543
No 333
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=49.88 E-value=55 Score=27.22 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=53.7
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhh---cc---cCCcEEEEecCCCHHHHHhhcCCCceEEE
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRV---TP---KTGVVVKRVNTCDLDEVASAIGPWTKLVW 144 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~---~~---~~g~~~~~~~~~d~~~l~~~l~~~~~~v~ 144 (301)
.+++++|+..+ .++..+++.|.+|++..-.-......+... .. ..++.+...+..|.+.++++++ ++.+|+
T Consensus 29 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi 107 (352)
T 1sb8_A 29 VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-GVDYVL 107 (352)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-TCSEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-CCCEEE
Confidence 46777776444 456667777888775433211111111111 11 2466777778888898988887 566666
Q ss_pred EeCCCCCccc-c-----------ccHHHHHHHHHHcCC
Q 022194 145 VESPTNPRQQ-I-----------CDIRKIAEMAHAHGA 170 (301)
Q Consensus 145 i~~~~np~G~-~-----------~~l~~l~~l~~~~~~ 170 (301)
-+......+. . .-...+++.|++.++
T Consensus 108 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 145 (352)
T 1sb8_A 108 HQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 145 (352)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5433221111 0 113557888888774
No 334
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=49.81 E-value=79 Score=23.69 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=24.5
Q ss_pred HhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 022194 133 ASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 133 ~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li 173 (301)
...++++..+|+++. +|...++-++++.+|+.|+.+|
T Consensus 104 ~~~~~~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI 140 (196)
T 2yva_A 104 RALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIV 140 (196)
T ss_dssp HHHCCTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEE
Confidence 344555555555443 3566778889999999997554
No 335
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=49.62 E-value=61 Score=25.78 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcC-CCCccHHHHHhhhcc-cCCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~-~~y~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.. ..-.........+.. ...+.+..++..|.+++++.++ ..+.
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWY 106 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468888888666 36667888898885532 221111111111111 1245566666668777776664 3566
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
.++-+..
T Consensus 107 ~li~nAg 113 (267)
T 4iiu_A 107 GVVSNAG 113 (267)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665433
No 336
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=49.27 E-value=89 Score=25.07 Aligned_cols=76 Identities=7% Similarity=0.065 Sum_probs=44.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-....... ..++.. .+.+...+..|.+++++.++ .++.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 111 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA-DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID 111 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 567788887666 356667888888876554332222221 112222 34555666668877776665 3677
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 112 ~lvnnAg 118 (276)
T 3r1i_A 112 IAVCNAG 118 (276)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7765543
No 337
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=49.21 E-value=53 Score=26.40 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=42.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCC--------C----ccHHHHHhhhcccCCcE--EEEecCCCHHHHHhh
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL--------Y----GGTDRLLSRVTPKTGVV--VKRVNTCDLDEVASA 135 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~--------y----~~~~~~~~~~~~~~g~~--~~~~~~~d~~~l~~~ 135 (301)
..+++|+|+..| .....+++.|.+|++.+-. | ..........++..+.+ ....+..|.+.+++.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 467788887666 4667788889888775421 1 11111111222333444 444555577777766
Q ss_pred cC------CCceEEEEeCCC
Q 022194 136 IG------PWTKLVWVESPT 149 (301)
Q Consensus 136 l~------~~~~~v~i~~~~ 149 (301)
++ ..+.+++-+...
T Consensus 96 ~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 96 VADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 64 366776655433
No 338
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=49.01 E-value=57 Score=25.20 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=40.5
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC---CCceEEEE
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG---PWTKLVWV 145 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~---~~~~~v~i 145 (301)
.+++++|+..| ..+..+++.|.+|++.+-.-... +..... ..+.+...+..|.+.+++.+. ....+++-
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL----STVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH----HHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 46777777665 35666788888887654332222 222222 234556666668887777664 23355554
Q ss_pred eC
Q 022194 146 ES 147 (301)
Q Consensus 146 ~~ 147 (301)
+.
T Consensus 79 ~A 80 (230)
T 3guy_A 79 SA 80 (230)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 339
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=48.99 E-value=28 Score=30.55 Aligned_cols=89 Identities=9% Similarity=0.021 Sum_probs=60.5
Q ss_pred HHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecC--CCHHHHHhhcCCC-ceEEEEeCCCCCccccccHHH
Q 022194 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRK 160 (301)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~--~d~~~l~~~l~~~-~~~v~i~~~~np~G~~~~l~~ 160 (301)
+..++.+-+.+.+.+|....-...|..+.+.. .+.+.-=+. .+.+++.+.+..+ ..+|.+. + |-.|.+.+..+
T Consensus 281 ~~~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik-~-~~~GGitea~~ 358 (432)
T 2ptz_A 281 YCKWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLK-I-NQIGTISEAIA 358 (432)
T ss_dssp HHHHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHHHHH
T ss_pred HHHHHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEec-c-cccCCHHHHHH
Confidence 33555555678899997766666666666665 456532222 4678888888654 4454433 3 44789999999
Q ss_pred HHHHHHHcCCEEEEeC
Q 022194 161 IAEMAHAHGALLLVDN 176 (301)
Q Consensus 161 l~~l~~~~~~~li~D~ 176 (301)
++++|+++|+.+++=.
T Consensus 359 i~~lA~~~g~~v~~~h 374 (432)
T 2ptz_A 359 SSKLCMENGWSVMVSH 374 (432)
T ss_dssp HHHHHHHTTCEEEEEC
T ss_pred HHHHHHHcCCeEEecC
Confidence 9999999999886643
No 340
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=48.98 E-value=30 Score=26.58 Aligned_cols=49 Identities=8% Similarity=0.074 Sum_probs=36.9
Q ss_pred CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEE--EEeCCcCC
Q 022194 127 CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL--LVDNSIMS 180 (301)
Q Consensus 127 ~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~l--i~D~~~~~ 180 (301)
.+.++++.+++.+...+++- .|.+..++++.+.+|++|-.+ +.|-+.+.
T Consensus 17 r~~~~l~~al~s~~~~ifll-----~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl 67 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVML-----ETHVAQLKALVKYAQAGGKKVLLHADLVNGL 67 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEEC-----SEETTTHHHHHHHHHHTTCEEEEEGGGEETC
T ss_pred cCHHHHHHHHcCCCCEEEEe-----cCcHHHHHHHHHHHHHcCCeEEEecCchhcc
Confidence 37899999998777777764 366788999999999998544 44555443
No 341
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=48.89 E-value=40 Score=25.97 Aligned_cols=73 Identities=10% Similarity=0.012 Sum_probs=43.9
Q ss_pred eEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 73 ALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 73 ~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
.++++.|.-+...+..+.+.|..|++-+..-... +...+..+..+..-+..+.+.++++--.+..+|+++.++
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~----~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDRELC----EEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHH----HHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH----HHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 5677777655555555656676666655432222 233344577777777778888877644566777765443
No 342
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=48.88 E-value=69 Score=25.32 Aligned_cols=75 Identities=9% Similarity=0.172 Sum_probs=42.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-...... ...++..+ +.+...+..|.+++++.++ ..+.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEA-KLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888887666 35666788898887754332222211 12223333 3444555567777766654 3566
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 86 ~lv~nA 91 (257)
T 3imf_A 86 ILINNA 91 (257)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 343
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=48.76 E-value=62 Score=25.91 Aligned_cols=78 Identities=12% Similarity=0.133 Sum_probs=43.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEE--EEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~--~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-...... ...++..+.++ ..++..|.+++++.++ ..+.
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 83 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAI-ATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRID 83 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888887666 35666788888887754332222111 12222334444 4455557777766654 3567
Q ss_pred EEEEeCCCC
Q 022194 142 LVWVESPTN 150 (301)
Q Consensus 142 ~v~i~~~~n 150 (301)
+++-+....
T Consensus 84 ~lVnnAG~~ 92 (264)
T 3tfo_A 84 VLVNNAGVM 92 (264)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 766554333
No 344
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=48.74 E-value=66 Score=26.48 Aligned_cols=94 Identities=21% Similarity=0.249 Sum_probs=52.0
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc-CCcEEEEecCCCHHHHHhhcCC-CceEEEEeCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-TGVVVKRVNTCDLDEVASAIGP-WTKLVWVESP 148 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~-~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~ 148 (301)
.+++++|+..+ .++..+++.|.+|++..-.-.... ..... .++.+...+..|.+.++++++. .+.+|+-+..
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 97 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR----EVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAA 97 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG----GGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch----hhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCc
Confidence 46777776554 456667777888775432211111 11111 3567777777788888877752 5666665433
Q ss_pred CCCcccc---------ccHHHHHHHHHHcCC
Q 022194 149 TNPRQQI---------CDIRKIAEMAHAHGA 170 (301)
Q Consensus 149 ~np~G~~---------~~l~~l~~l~~~~~~ 170 (301)
....+.. .-...+++.|++.++
T Consensus 98 ~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 128 (330)
T 2pzm_A 98 AYKDPDDWAEDAATNVQGSINVAKAASKAGV 128 (330)
T ss_dssp CCSCTTCHHHHHHHHTHHHHHHHHHHHHHTC
T ss_pred cCCCccccChhHHHHHHHHHHHHHHHHHcCC
Confidence 2211111 113457777777664
No 345
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=48.61 E-value=52 Score=24.38 Aligned_cols=88 Identities=16% Similarity=0.066 Sum_probs=50.6
Q ss_pred ceEEecchHHHHHHHHhccCC-CCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhh-cCCCceEEEEeCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASA-IGPWTKLVWVESPT 149 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~-g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~-l~~~~~~v~i~~~~ 149 (301)
.+++++.|.-+..++..+.+. |..|++.+..-... ..+...|..+...+..+.+.++++ --.+..+|+++.++
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~-----~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIREEAA-----QQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHH-----HHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHH-----HHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 577888887555555555555 66676655432211 223345777776677777777765 12456777766543
Q ss_pred CCccccccHHHHHHHHHHcC
Q 022194 150 NPRQQICDIRKIAEMAHAHG 169 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~ 169 (301)
. .....+...+++.+
T Consensus 116 ~-----~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 116 H-----QGNQTALEQLQRRN 130 (183)
T ss_dssp H-----HHHHHHHHHHHHTT
T ss_pred h-----HHHHHHHHHHHHHC
Confidence 1 12344556666654
No 346
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=48.48 E-value=1.2e+02 Score=25.58 Aligned_cols=82 Identities=12% Similarity=0.068 Sum_probs=51.0
Q ss_pred CeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHHHHHHcCCE
Q 022194 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 171 (301)
Q Consensus 94 ~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~l~~~-~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~ 171 (301)
+-..+..|........+..+.+..++.+..-.. .+.+++++.+... ..+|.+. + +..|.+.+..+++++|+++|+.
T Consensus 215 ~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k-~-~~~GGit~~~~i~~~A~~~g~~ 292 (370)
T 1chr_A 215 GVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLK-L-CNMGGVSATQKIAAVAEASGIA 292 (370)
T ss_dssp TEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEEC-T-TTSCSHHHHHHHHHHHHHHTCE
T ss_pred CCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEEC-c-cccCCHHHHHHHHHHHHHcCCe
Confidence 445666665443333333444444555443332 2677787777643 4555443 3 3378899999999999999998
Q ss_pred EEEeCC
Q 022194 172 LLVDNS 177 (301)
Q Consensus 172 li~D~~ 177 (301)
+.+=..
T Consensus 293 ~~~~~~ 298 (370)
T 1chr_A 293 SYGGTM 298 (370)
T ss_dssp EEECCS
T ss_pred EEecCC
Confidence 876543
No 347
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=48.26 E-value=23 Score=28.35 Aligned_cols=72 Identities=11% Similarity=0.059 Sum_probs=44.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.... ..+...++.+...+..|.+.+++.++ ..+.++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV----TELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH----HHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 467888887666 356667788888776544333222 22233456777778778877776664 356666
Q ss_pred EEeC
Q 022194 144 WVES 147 (301)
Q Consensus 144 ~i~~ 147 (301)
+-+.
T Consensus 104 v~nA 107 (260)
T 3gem_A 104 VHNA 107 (260)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 348
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=48.17 E-value=80 Score=26.63 Aligned_cols=86 Identities=9% Similarity=0.043 Sum_probs=47.4
Q ss_pred CCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 022194 91 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (301)
Q Consensus 91 ~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~ 168 (301)
.+-+-.++..|........+..+.+..++.+..-.. .+.+++++.+. ....+|.+. + +..|.+.+..+++++|+++
T Consensus 207 ~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k-~-~~~GGit~~~~i~~~A~~~ 284 (354)
T 3jva_A 207 ADYQIELVEQPVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIK-L-MKCGGIHEALKINQICETA 284 (354)
T ss_dssp TTSCEEEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEEC-H-HHHTSHHHHHHHHHHHHHT
T ss_pred HhcCCCEEECCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEEC-c-hhcCCHHHHHHHHHHHHHc
Confidence 333334555554433233333333344444433222 25666666654 234444433 2 2367778889999999999
Q ss_pred CCEEEEeCCc
Q 022194 169 GALLLVDNSI 178 (301)
Q Consensus 169 ~~~li~D~~~ 178 (301)
|+.+.+-...
T Consensus 285 gi~~~~~~~~ 294 (354)
T 3jva_A 285 GIECMIGCMA 294 (354)
T ss_dssp TCEEEECCCT
T ss_pred CCeEEecCCC
Confidence 9999876554
No 349
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=48.07 E-value=71 Score=25.35 Aligned_cols=89 Identities=15% Similarity=0.060 Sum_probs=52.6
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.+++|+|+..| .++..+++.|.+|++.+-.-. -....++.+...+..|.+.+++.++ ++.+|+-+....
T Consensus 5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~--------~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~Ag~~ 75 (267)
T 3rft_A 5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL--------DPAGPNEECVQCDLADANAVNAMVA-GCDGIVHLGGIS 75 (267)
T ss_dssp EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCC--------CCCCTTEEEEECCTTCHHHHHHHHT-TCSEEEECCSCC
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCc--------cccCCCCEEEEcCCCCHHHHHHHHc-CCCEEEECCCCc
Confidence 46777777555 456667778877776442211 1113456777778889999998887 566666543322
Q ss_pred Ccccccc--------HHHHHHHHHHcCC
Q 022194 151 PRQQICD--------IRKIAEMAHAHGA 170 (301)
Q Consensus 151 p~G~~~~--------l~~l~~l~~~~~~ 170 (301)
....... ...+.+.|++++.
T Consensus 76 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~ 103 (267)
T 3rft_A 76 VEKPFEQILQGNIIGLYNLYEAARAHGQ 103 (267)
T ss_dssp SCCCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2211111 2346777777653
No 350
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=47.98 E-value=55 Score=26.18 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=43.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.- ..++.. .........++..|.+++++.++ ..+.++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 91 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKAL-NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI 91 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH----HHHHTT-CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHh-hcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 467888887666 35666788888887654321 112222 22356666777778877776664 356666
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 92 vnnAg 96 (266)
T 3p19_A 92 VNNAG 96 (266)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65443
No 351
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.93 E-value=54 Score=26.32 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=41.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCc-----------cHHHHHhhhcccCC--cEEEEecCCCHHHHHhhc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYG-----------GTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAI 136 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~-----------~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l 136 (301)
..+++|+|+..| ..+..+++.|.+|++.+-... .........++..+ +.+..++..|.+++++.+
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 467888887666 466778888988876543210 01111111122223 444455555777776655
Q ss_pred C------CCceEEEEeCC
Q 022194 137 G------PWTKLVWVESP 148 (301)
Q Consensus 137 ~------~~~~~v~i~~~ 148 (301)
. ..+.+++-+..
T Consensus 91 ~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 91 ANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 4 35666665433
No 352
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=47.87 E-value=73 Score=25.19 Aligned_cols=76 Identities=9% Similarity=0.112 Sum_probs=43.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.......... .....+...+..|.+++++.++ .++.++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457777777665 466678888988877654322222111111 1234555666668877776664 256776
Q ss_pred EEeCCC
Q 022194 144 WVESPT 149 (301)
Q Consensus 144 ~i~~~~ 149 (301)
+-+...
T Consensus 87 v~~Ag~ 92 (259)
T 4e6p_A 87 VNNAAL 92 (259)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 655433
No 353
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=47.75 E-value=67 Score=25.45 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=42.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEc-CCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..| ..+..+++.|.+|++. +..-....... ..++.. .+.+...+..|.+++++.++ ..+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAV-AEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEI 87 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHH-HHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 467788887666 3666788889888875 33222222111 222222 34555666668877776664 356
Q ss_pred eEEEEe
Q 022194 141 KLVWVE 146 (301)
Q Consensus 141 ~~v~i~ 146 (301)
.+++-+
T Consensus 88 d~lv~n 93 (259)
T 3edm_A 88 HGLVHV 93 (259)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 666544
No 354
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=47.73 E-value=13 Score=33.08 Aligned_cols=30 Identities=7% Similarity=0.078 Sum_probs=26.4
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
+...|...+++++++.||++|+-||+|-+.
T Consensus 72 d~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 72 RTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 344688889999999999999999999995
No 355
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=47.67 E-value=93 Score=23.90 Aligned_cols=72 Identities=11% Similarity=0.015 Sum_probs=42.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc-CCcEEEEecCCCHHHHHhhcC------CCceE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-TGVVVKRVNTCDLDEVASAIG------PWTKL 142 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~-~g~~~~~~~~~d~~~l~~~l~------~~~~~ 142 (301)
..+++++|+..+ ..+..+++.|.+|++..-.-... +..... .++.+...+..|.+.+++.++ .++.+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL----QALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457888887665 46666788888887654321111 111111 156677777778877766654 25666
Q ss_pred EEEeC
Q 022194 143 VWVES 147 (301)
Q Consensus 143 v~i~~ 147 (301)
++-+.
T Consensus 82 li~~A 86 (234)
T 2ehd_A 82 LVNNA 86 (234)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66543
No 356
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=47.63 E-value=12 Score=24.40 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCEEEEeCCc
Q 022194 158 IRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~ 178 (301)
-.+|.++|+++|+.++.|...
T Consensus 29 A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHH
Confidence 577999999999999999863
No 357
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=47.60 E-value=46 Score=24.30 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=38.0
Q ss_pred CHHHHHhhcCC-CceEEEEeCCCCCcccccc----HHHHH-HHHHHcCC-EEEEeCCcCC
Q 022194 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICD----IRKIA-EMAHAHGA-LLLVDNSIMS 180 (301)
Q Consensus 128 d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~----l~~l~-~l~~~~~~-~li~D~~~~~ 180 (301)
+.+.+.+.+++ ++..|++..|-|..|...+ .++++ .+++++++ +..+||.++.
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 67888888875 6889999999888787754 23444 34445675 6778999763
No 358
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=47.59 E-value=67 Score=22.24 Aligned_cols=90 Identities=14% Similarity=-0.031 Sum_probs=47.0
Q ss_pred CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 71 ~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
...++++.|.-+...+..+.+.|..|.+.+..-. .. ..+...+..+...+..+.+.+++.--.+..+|+.+.+..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~----~~-~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEE----KV-NAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHH----HH-HTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH----HH-HHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 3567777776554455555555655655443211 11 223344666655566677777665223567777665442
Q ss_pred CccccccHHHHHHHHHHcC
Q 022194 151 PRQQICDIRKIAEMAHAHG 169 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~ 169 (301)
. ..-..+...+++.+
T Consensus 82 ~----~~~~~~~~~~~~~~ 96 (144)
T 2hmt_A 82 I----QASTLTTLLLKELD 96 (144)
T ss_dssp H----HHHHHHHHHHHHTT
T ss_pred h----HHHHHHHHHHHHcC
Confidence 1 11123556666654
No 359
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=47.58 E-value=67 Score=27.55 Aligned_cols=111 Identities=8% Similarity=0.052 Sum_probs=67.5
Q ss_pred HHHHhhcCCCceEEe--cchH---HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC-CHHHHHhh
Q 022194 62 SLLAKLDKADRALCF--TSGM---AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASA 135 (301)
Q Consensus 62 ~~l~~~~~~~~~i~~--~sG~---~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~ 135 (301)
+.+.+..|.+-.+.+ ++|. +++..+.. +.+-+-..+.+|........+..+.+..++.+..-... +.+++++.
T Consensus 190 ~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~ 268 (392)
T 2poz_A 190 KAVRDAAGPEIELMVDLSGGLTTDETIRFCRK-IGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKI 268 (392)
T ss_dssp HHHHHHHCTTSEEEEECTTCSCHHHHHHHHHH-HGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCCCHHHHHHHHHH-HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHH
Confidence 445555666533433 3342 44444433 44445557888765444444445555555555444432 67888888
Q ss_pred cCCC-ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 022194 136 IGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 136 l~~~-~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D 175 (301)
+... ..+|.+. -+-.|.+.+..+++++|+++|+.+++=
T Consensus 269 i~~~~~d~v~ik--~~~~GGit~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 269 FELQACGIIQPD--IGTAGGLMETKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp HTTTCCSEECCC--TTTSSCHHHHHHHHHHHHTTTCEECCC
T ss_pred HHcCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCeEecC
Confidence 8754 4454433 344799999999999999999988773
No 360
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=47.54 E-value=31 Score=29.13 Aligned_cols=75 Identities=11% Similarity=0.212 Sum_probs=48.8
Q ss_pred CCCccHHHHHhhhcccCCcEEEEecCCCH-HHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 101 DLYGGTDRLLSRVTPKTGVVVKRVNTCDL-DEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 101 ~~y~~~~~~~~~~~~~~g~~~~~~~~~d~-~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
|.|.+..+.... .....+-+..++.... +.+.+++. ..++.+++-+...|- .+.++|.++++++|+.++==++.
T Consensus 65 pvy~sv~ea~~~-~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e---~~~~~l~~~a~~~g~rliGPNc~ 140 (334)
T 3mwd_B 65 PVFKNMADAMRK-HPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPE---ALTRKLIKKADQKGVTIIGPATV 140 (334)
T ss_dssp EEESSHHHHHHH-CTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCH---HHHHHHHHHHHHHTCEEECSSCC
T ss_pred eeeCCHHHHhhc-CCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEEEccCCc
Confidence 567766532211 1134677777777664 67777777 778877764333332 46788999999999988866665
Q ss_pred C
Q 022194 179 M 179 (301)
Q Consensus 179 ~ 179 (301)
+
T Consensus 141 G 141 (334)
T 3mwd_B 141 G 141 (334)
T ss_dssp C
T ss_pred c
Confidence 4
No 361
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=47.49 E-value=44 Score=27.44 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=51.8
Q ss_pred EEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeCCCC
Q 022194 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTN 150 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~~n 150 (301)
+++++|+.-+ .++..+++.|.+|.+.+..-.... .... .++.+...+..|.+.++++++. .+.+|+-.....
T Consensus 4 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~ 78 (330)
T 2c20_A 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE----DAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS 78 (330)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred EEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch----hhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence 5666666444 456667777887775432211111 1111 2677778888888888887763 566666543322
Q ss_pred Ccccc------------ccHHHHHHHHHHcCC
Q 022194 151 PRQQI------------CDIRKIAEMAHAHGA 170 (301)
Q Consensus 151 p~G~~------------~~l~~l~~l~~~~~~ 170 (301)
..+.. .-...+++.|++.++
T Consensus 79 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 110 (330)
T 2c20_A 79 LVGVSMEKPLQYYNNNVYGALCLLEVMDEFKV 110 (330)
T ss_dssp CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccccccCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence 21110 113457778888775
No 362
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=47.39 E-value=56 Score=27.45 Aligned_cols=67 Identities=13% Similarity=0.090 Sum_probs=43.6
Q ss_pred ccCCCCeEEEcCCCCccH---HHH---HhhhcccCCcEEEEecCC-------------CHHHHHhhcC-CCceEEEEeCC
Q 022194 89 LLGTGEEIVAGDDLYGGT---DRL---LSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~---~~~---~~~~~~~~g~~~~~~~~~-------------d~~~l~~~l~-~~~~~v~i~~~ 148 (301)
.+++||+|-+..|+.... ... ....++..|.+++.-+.. -.++|.+++. +++++|+....
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 578999999888876543 222 234567899999877632 2456666665 67888887655
Q ss_pred CCCcccc
Q 022194 149 TNPRQQI 155 (301)
Q Consensus 149 ~np~G~~ 155 (301)
..-+-.+
T Consensus 88 G~g~~rl 94 (331)
T 4e5s_A 88 GYNSNGL 94 (331)
T ss_dssp CSCGGGG
T ss_pred cccHHHH
Confidence 4433333
No 363
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=47.27 E-value=40 Score=26.28 Aligned_cols=74 Identities=7% Similarity=0.003 Sum_probs=50.0
Q ss_pred CeEEEcCC--CCccH-HHHHhhhcccCCcEEEEecCC-CHHHHHhhc-CCCceEEEE--eCCCCCccccccHHHHHHHHH
Q 022194 94 EEIVAGDD--LYGGT-DRLLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWV--ESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 94 ~~Vlv~~~--~y~~~-~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l-~~~~~~v~i--~~~~np~G~~~~l~~l~~l~~ 166 (301)
.+|++..+ ..|.. .......++..|.++++...+ +.+++.+.+ +.++.+|.+ +... +.....++++++.++
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~--~~~~~~~~~~i~~l~ 170 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALM--TTSMLGQKDLMDRLN 170 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSS--HHHHTHHHHHHHHHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcc--cCcHHHHHHHHHHHH
Confidence 35654433 33333 344567889999999998765 777775554 467888888 5443 345566899998888
Q ss_pred HcC
Q 022194 167 AHG 169 (301)
Q Consensus 167 ~~~ 169 (301)
+.+
T Consensus 171 ~~~ 173 (215)
T 3ezx_A 171 EEK 173 (215)
T ss_dssp HTT
T ss_pred HcC
Confidence 864
No 364
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=47.16 E-value=66 Score=27.15 Aligned_cols=92 Identities=11% Similarity=0.000 Sum_probs=52.6
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.+++++|+..+ .++..+++.|.+|.+..-.-... ......++.+...+..|.+.++++++ .+.+|+-+....
T Consensus 31 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~Vih~A~~~ 104 (379)
T 2c5a_A 31 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-----MTEDMFCDEFHLVDLRVMENCLKVTE-GVDHVFNLAADM 104 (379)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-----SCGGGTCSEEEECCTTSHHHHHHHHT-TCSEEEECCCCC
T ss_pred eEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc-----hhhccCCceEEECCCCCHHHHHHHhC-CCCEEEECceec
Confidence 46777776444 45666777787776543221111 11122467777888889999988886 566666543322
Q ss_pred -Cccc-ccc-----------HHHHHHHHHHcCC
Q 022194 151 -PRQQ-ICD-----------IRKIAEMAHAHGA 170 (301)
Q Consensus 151 -p~G~-~~~-----------l~~l~~l~~~~~~ 170 (301)
+... ..+ ...+++.|++.++
T Consensus 105 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 137 (379)
T 2c5a_A 105 GGMGFIQSNHSVIMYNNTMISFNMIEAARINGI 137 (379)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1111 111 2457788888775
No 365
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=47.06 E-value=84 Score=25.38 Aligned_cols=89 Identities=19% Similarity=0.222 Sum_probs=49.3
Q ss_pred EEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCCC
Q 022194 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~np 151 (301)
+++++|+.-+ .++..+++.|.+|.+.+-.-... ......++.+...+..|.+ +.+.+.. .+|+-......
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~Dl~d~~-~~~~~~~--d~vih~A~~~~ 74 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR-----REFVNPSAELHVRDLKDYS-WGAGIKG--DVVFHFAANPE 74 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC-----GGGSCTTSEEECCCTTSTT-TTTTCCC--SEEEECCSSCS
T ss_pred EEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc-----hhhcCCCceEEECccccHH-HHhhcCC--CEEEECCCCCC
Confidence 5677776444 46666777888887654322211 1112456777777777777 7777765 55554332111
Q ss_pred cc-ccc-----------cHHHHHHHHHHcCC
Q 022194 152 RQ-QIC-----------DIRKIAEMAHAHGA 170 (301)
Q Consensus 152 ~G-~~~-----------~l~~l~~l~~~~~~ 170 (301)
.. ... -...+++.|++.++
T Consensus 75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 105 (312)
T 3ko8_A 75 VRLSTTEPIVHFNENVVATFNVLEWARQTGV 105 (312)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred chhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11 111 12457778888775
No 366
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=46.78 E-value=29 Score=28.20 Aligned_cols=98 Identities=12% Similarity=0.092 Sum_probs=54.7
Q ss_pred ceEEecchHHHH--HHHHhccCCC-CeEEEc-CCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTG-EEIVAG-DDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g-~~Vlv~-~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~ 147 (301)
..+++++++..+ .++..+++.| .+|.+. ...-.... ......++++...+..|.+.++++++. +..|+.+.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~----~~l~~~~~~~~~~D~~d~~~l~~~~~~-~d~vi~~a 80 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA----KELRLQGAEVVQGDQDDQVIMELALNG-AYATFIVT 80 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH----HHHHHTTCEEEECCTTCHHHHHHHHTT-CSEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH----HHHHHCCCEEEEecCCCHHHHHHHHhc-CCEEEEeC
Confidence 356777776444 4555666666 566543 22211111 112235788888888899999988874 56666543
Q ss_pred CCCCccc----cccHHHHHHHHHHcCC-EEEE
Q 022194 148 PTNPRQQ----ICDIRKIAEMAHAHGA-LLLV 174 (301)
Q Consensus 148 ~~np~G~----~~~l~~l~~l~~~~~~-~li~ 174 (301)
...+... +.-...+++.|++.++ .+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~ 112 (299)
T 2wm3_A 81 NYWESCSQEQEVKQGKLLADLARRLGLHYVVY 112 (299)
T ss_dssp CHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCccccchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 2111000 1124568888888776 4444
No 367
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=46.61 E-value=54 Score=26.02 Aligned_cols=78 Identities=10% Similarity=0.078 Sum_probs=43.6
Q ss_pred ceEEecchH-HHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGM-AAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~-~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++++|+ ..| ..+..+++.|.+|++.+-.-.........+... ..+.+..++..|.+.+++.++ .++
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 102 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 456677765 344 466677888888877543322222222222222 245566666668777776654 356
Q ss_pred eEEEEeCCC
Q 022194 141 KLVWVESPT 149 (301)
Q Consensus 141 ~~v~i~~~~ 149 (301)
.+++-+...
T Consensus 103 d~li~~Ag~ 111 (266)
T 3o38_A 103 DVLVNNAGL 111 (266)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCCc
Confidence 776655443
No 368
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=46.58 E-value=56 Score=27.16 Aligned_cols=77 Identities=10% Similarity=0.114 Sum_probs=43.2
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCC-C---ccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL-Y---GGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------ 137 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~-y---~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------ 137 (301)
..+++|+|+..| ..+..+++.|.+|++..-. . ......+....... .+.+..++..|.+.+++.++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 467888887666 4667788889988753211 1 11111111222222 35555666668777776665
Q ss_pred CCceEEEEeCC
Q 022194 138 PWTKLVWVESP 148 (301)
Q Consensus 138 ~~~~~v~i~~~ 148 (301)
..+.+++-+..
T Consensus 86 g~iD~lVnnAG 96 (324)
T 3u9l_A 86 GRIDVLIHNAG 96 (324)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36677665443
No 369
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=46.51 E-value=63 Score=25.90 Aligned_cols=76 Identities=13% Similarity=0.081 Sum_probs=43.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEE--EecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK--RVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~--~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+..-....... .-++..+.++. ..+..|.+++++.++ .++.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-QEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVD 105 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 577888887666 366678888988887654322222111 12222333444 444557777766664 3566
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 106 ~lv~nAg 112 (271)
T 4ibo_A 106 ILVNNAG 112 (271)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665533
No 370
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=46.51 E-value=42 Score=26.04 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=30.1
Q ss_pred CCceEEEEeCC-CCCccccccHHHHHHHHHHcCCEEEE
Q 022194 138 PWTKLVWVESP-TNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 138 ~~~~~v~i~~~-~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
-.+.+|+.+-. .|..|......++.+++++||+.++.
T Consensus 157 l~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 157 LQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp SCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 45777777652 56789999999999999999998874
No 371
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=46.33 E-value=57 Score=25.75 Aligned_cols=72 Identities=13% Similarity=0.113 Sum_probs=40.0
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| .....+++.|.+|++.+-.-.... ...... .+.+...+..|.+++++.++ ..+.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE----EPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH 83 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887666 356677888888876554332222 222222 34555566668777776664 3566
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 84 ~lv~nA 89 (257)
T 3tpc_A 84 GLVNCA 89 (257)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 372
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=46.23 E-value=64 Score=27.13 Aligned_cols=67 Identities=12% Similarity=-0.022 Sum_probs=43.4
Q ss_pred ccCCCCeEEEcCCCCccH------HHHHhhhcccCCcEEEEecCC-------------CHHHHHhhcC-CCceEEEEeCC
Q 022194 89 LLGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (301)
Q Consensus 89 ~~~~g~~Vlv~~~~y~~~------~~~~~~~~~~~g~~~~~~~~~-------------d~~~l~~~l~-~~~~~v~i~~~ 148 (301)
.+++||+|.+..|+.... .......++..|.+++.-+.. -.++|.+++. +++++|+....
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 478899999888887542 111234567789999876532 2456666665 67888887655
Q ss_pred CCCcccc
Q 022194 149 TNPRQQI 155 (301)
Q Consensus 149 ~np~G~~ 155 (301)
..-+-.+
T Consensus 89 G~g~~rl 95 (336)
T 3sr3_A 89 GMNSNSL 95 (336)
T ss_dssp CSCGGGG
T ss_pred cccHHHH
Confidence 4433344
No 373
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=46.21 E-value=14 Score=32.88 Aligned_cols=29 Identities=3% Similarity=-0.009 Sum_probs=25.9
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
...|...+++++++.||++|+-||+|-+.
T Consensus 75 p~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 75 TKYGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 34688889999999999999999999985
No 374
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=46.15 E-value=82 Score=24.61 Aligned_cols=77 Identities=12% Similarity=0.146 Sum_probs=41.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..+ ..+..+++.|.+|++..-.-..........++..+ +.+...+..|.+++++.++ ..+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 84 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD 84 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 357788887666 35666778888887643211111111111112223 4455556668877776665 2567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 85 ~lv~nAg 91 (246)
T 2uvd_A 85 ILVNNAG 91 (246)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665433
No 375
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=46.03 E-value=14 Score=33.28 Aligned_cols=30 Identities=17% Similarity=0.145 Sum_probs=26.3
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
+...|...+++++++.||++|+-||+|-+.
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 334688889999999999999999999995
No 376
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=46.01 E-value=23 Score=28.35 Aligned_cols=49 Identities=18% Similarity=0.267 Sum_probs=34.6
Q ss_pred HHHHHhhcCCCceEEEEeCCCCC---------cccccc-HHHHHHHHHHcCCEEEEeCC
Q 022194 129 LDEVASAIGPWTKLVWVESPTNP---------RQQICD-IRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np---------~G~~~~-l~~l~~l~~~~~~~li~D~~ 177 (301)
.+.+++++...+..|.+-..+.+ ...... .+++.++|+++++.||+++-
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~ 104 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDR 104 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCH
Confidence 46677778778888888666532 222222 57799999999999999664
No 377
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=45.90 E-value=14 Score=32.88 Aligned_cols=30 Identities=7% Similarity=0.049 Sum_probs=26.3
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
+...|...+++++++.||++|+-||+|-+.
T Consensus 76 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 76 RTKYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 334688889999999999999999999985
No 378
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=45.88 E-value=49 Score=26.24 Aligned_cols=77 Identities=6% Similarity=0.054 Sum_probs=42.3
Q ss_pred ceEEecchH--HHH--HHHHhccCCCCeEEEcCCCCccH-HHHHhhhcccCCcEEEEe--cCCCHHHHHhhcC------C
Q 022194 72 RALCFTSGM--AAL--AAVTHLLGTGEEIVAGDDLYGGT-DRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG------P 138 (301)
Q Consensus 72 ~~i~~~sG~--~ai--~~~~~~~~~g~~Vlv~~~~y~~~-~~~~~~~~~~~g~~~~~~--~~~d~~~l~~~l~------~ 138 (301)
..+++|+|+ ..+ ..+..+++.|.+|++..-.-... ....+...+..+.++..+ +..|.+.+++.++ .
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFG 100 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTS
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 467777766 555 35667788888887754333222 222223333334444444 4447776666554 3
Q ss_pred CceEEEEeCC
Q 022194 139 WTKLVWVESP 148 (301)
Q Consensus 139 ~~~~v~i~~~ 148 (301)
++.+++-+..
T Consensus 101 ~id~li~nAg 110 (267)
T 3gdg_A 101 QIDAFIANAG 110 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 5677665533
No 379
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=45.86 E-value=33 Score=27.73 Aligned_cols=75 Identities=9% Similarity=0.044 Sum_probs=40.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC-CcEEEEecCCCHHHHHhhcC------CCceE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIG------PWTKL 142 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~-g~~~~~~~~~d~~~l~~~l~------~~~~~ 142 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.......+.+ ... .+.+...+..|.+++++.++ ..+.+
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL-SAYGDCQAIPADLSSEAGARRLAQALGELSARLDI 108 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-TTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-HhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 467777777665 356667788888877543322111111122 222 33444445557777766654 35666
Q ss_pred EEEeC
Q 022194 143 VWVES 147 (301)
Q Consensus 143 v~i~~ 147 (301)
++-+.
T Consensus 109 lvnnA 113 (276)
T 2b4q_A 109 LVNNA 113 (276)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66543
No 380
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=45.83 E-value=39 Score=22.69 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=35.9
Q ss_pred CHHHHHhhcCC-CceEEEEeCCCCCcccccc----HHHHHHHHHHcCC-EEEEeCCcC
Q 022194 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGA-LLLVDNSIM 179 (301)
Q Consensus 128 d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~----l~~l~~l~~~~~~-~li~D~~~~ 179 (301)
+.+.+++.+++ ++..+++--|-|+.|...+ .++.++..++.++ +..+||-++
T Consensus 39 ~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 45667777764 7889999999998888754 4455554444365 567888765
No 381
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=45.75 E-value=29 Score=27.57 Aligned_cols=77 Identities=9% Similarity=0.079 Sum_probs=43.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc---c-CCcEEEEecCCCHHHHHhhcC------CC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP---K-TGVVVKRVNTCDLDEVASAIG------PW 139 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~---~-~g~~~~~~~~~d~~~l~~~l~------~~ 139 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.........+.. . ..+.+...+..|.+++++.++ ..
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA 87 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 467788887666 35566777888887654332222211111111 1 345666677778877776664 35
Q ss_pred ceEEEEeCC
Q 022194 140 TKLVWVESP 148 (301)
Q Consensus 140 ~~~v~i~~~ 148 (301)
+.+++-+..
T Consensus 88 iD~lvnnAg 96 (250)
T 3nyw_A 88 VDILVNAAA 96 (250)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 666665433
No 382
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=45.74 E-value=14 Score=32.35 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=26.3
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
+...|...+++++++.||++|+-||+|-+.
T Consensus 80 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 80 ETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 334688889999999999999999999995
No 383
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=45.67 E-value=50 Score=26.45 Aligned_cols=74 Identities=16% Similarity=0.110 Sum_probs=45.2
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.......... ...+.....+..|.+.+++.++ ..+.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 89 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV 89 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467788887666 466678888888877654433333222222 2345666677778877776665 356666
Q ss_pred EEeC
Q 022194 144 WVES 147 (301)
Q Consensus 144 ~i~~ 147 (301)
+-+.
T Consensus 90 v~nA 93 (271)
T 3tzq_B 90 DNNA 93 (271)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 384
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=45.53 E-value=22 Score=31.13 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=63.6
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecC-C-CHHHHHhhcCC-CceEEEEeCCCCCcccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT-C-DLDEVASAIGP-WTKLVWVESPTNPRQQI 155 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~-~-d~~~l~~~l~~-~~~~v~i~~~~np~G~~ 155 (301)
+++..+..++++-+.+.+.+|....-...|..+.+..+ +.+.-=+. . +..++.+.+.. ...+|.+. .|-.|.+
T Consensus 265 eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK--v~qiGGi 342 (417)
T 3qn3_A 265 ALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIK--PNQIGTI 342 (417)
T ss_dssp HHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC--HHHHCSH
T ss_pred HHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEec--CCCCCCH
Confidence 55666666666656788999976655556666665553 44433222 1 38888888764 34454433 3447999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCC
Q 022194 156 CDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~~ 177 (301)
.+..+++++|+++|+.+++=..
T Consensus 343 Tea~kia~lA~~~G~~v~vsh~ 364 (417)
T 3qn3_A 343 TQTMRTVRLAQRNNYKCVMSHR 364 (417)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCeEEEeCC
Confidence 9999999999999998877443
No 385
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=45.43 E-value=72 Score=25.22 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-....... ..+.. ++.+...+..|.+.+++.++ ..+.++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV-AGLEN-GGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTCTT-CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHhc-CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467778887665 356667888888876543211111111 11111 45666677778887776665 256666
Q ss_pred EEeC
Q 022194 144 WVES 147 (301)
Q Consensus 144 ~i~~ 147 (301)
+-+.
T Consensus 91 v~~A 94 (263)
T 3ak4_A 91 CANA 94 (263)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 386
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=44.89 E-value=60 Score=28.00 Aligned_cols=111 Identities=9% Similarity=0.016 Sum_probs=67.2
Q ss_pred HHHHhhcCCCceEEe--cchH---HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHHhh
Q 022194 62 SLLAKLDKADRALCF--TSGM---AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASA 135 (301)
Q Consensus 62 ~~l~~~~~~~~~i~~--~sG~---~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~ 135 (301)
+.+.+..|.+-.+.+ ++|. +++..+.. +.+-+-..+.+|........+..+.+..++.+..-.. .+.+++++.
T Consensus 209 ~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 287 (410)
T 2gl5_A 209 AAMREAMGDDADIIVEIHSLLGTNSAIQFAKA-IEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYREL 287 (410)
T ss_dssp HHHHHHHCSSSEEEEECTTCSCHHHHHHHHHH-HGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCCCHHHHHHHHHH-HHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHH
Confidence 445555666533433 3342 44444433 4444555788886544444444555555555544443 267888888
Q ss_pred cCCC-ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 022194 136 IGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 136 l~~~-~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D 175 (301)
+... ..+|.+. -+..|.+.+..+++++|+++|+.+++=
T Consensus 288 i~~~~~d~v~ik--~~~~GGit~~~~ia~~A~~~gi~~~~h 326 (410)
T 2gl5_A 288 LEKQSIAVAQPD--LCLCGGITEGKKICDYANIYDTTVQVH 326 (410)
T ss_dssp HHTTCCSEECCC--TTTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred HHcCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 8643 4454432 344799999999999999999987763
No 387
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=44.87 E-value=1e+02 Score=24.44 Aligned_cols=76 Identities=9% Similarity=-0.003 Sum_probs=42.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++++|+..+ ..+..+++.|.+|++.+-.-....... ..++. ..+.+...+..|.+.+++.++ ..+.
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 110 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVS 110 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-HHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCc
Confidence 467777777665 356667788888876543221111111 11112 234555666667777766654 3567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+|+-+..
T Consensus 111 ~li~~Ag 117 (272)
T 1yb1_A 111 ILVNNAG 117 (272)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665543
No 388
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=44.85 E-value=1e+02 Score=25.30 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=42.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCC----------CccHHHHHhhhcccCCcEEEEe--cCCCHHHHHhhcC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL----------YGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG 137 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~----------y~~~~~~~~~~~~~~g~~~~~~--~~~d~~~l~~~l~ 137 (301)
..+++|+|+..| ..+..+++.|.+|++.+-. -..... ....+...+.++..+ +..|.+++++.++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQS-VVDEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHH-HHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHH-HHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467888887666 3566788889888875432 111111 112223334444444 4447777766654
Q ss_pred ------CCceEEEEeC
Q 022194 138 ------PWTKLVWVES 147 (301)
Q Consensus 138 ------~~~~~v~i~~ 147 (301)
..+.+++-+.
T Consensus 107 ~~~~~~g~iD~lv~nA 122 (322)
T 3qlj_A 107 TAVETFGGLDVLVNNA 122 (322)
T ss_dssp HHHHHHSCCCEEECCC
T ss_pred HHHHHcCCCCEEEECC
Confidence 2566666443
No 389
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=44.72 E-value=58 Score=25.82 Aligned_cols=76 Identities=12% Similarity=0.060 Sum_probs=43.2
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++++|+..| ..+..+++.|.+|++.+-.-....... ..+...+ +.+..++..|.+.+++.++ ..+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 108 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCD 108 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 568888887666 356667888888877644322222111 2222233 3444455557777766654 3567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 109 ~lv~~Ag 115 (262)
T 3rkr_A 109 VLVNNAG 115 (262)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7765543
No 390
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=44.62 E-value=1.2e+02 Score=24.25 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=41.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEE--EecCCCHHHHHhhcC-----CCceE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK--RVNTCDLDEVASAIG-----PWTKL 142 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~--~~~~~d~~~l~~~l~-----~~~~~ 142 (301)
..+++|+|+..| ..+..+++.|.+|++.+.. ....... ..+...+.++. ..+..|.+++++... ..+.+
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~ 109 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVA-DEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV 109 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHH-HHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHH-HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence 567788887666 3666788889888776522 2222222 22233344444 445557766655532 35666
Q ss_pred EEEeCC
Q 022194 143 VWVESP 148 (301)
Q Consensus 143 v~i~~~ 148 (301)
++-+..
T Consensus 110 lv~nAg 115 (273)
T 3uf0_A 110 LVNNAG 115 (273)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 665433
No 391
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=44.45 E-value=61 Score=25.32 Aligned_cols=76 Identities=9% Similarity=0.152 Sum_probs=42.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..+ ..+..+++.|.+|++....-..... +...++..+ +.+...+..|.+.+++.++ ..+.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEK-FENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887665 3566778888888765443222211 112222233 4455556667777766554 2567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 85 ~li~~Ag 91 (247)
T 3lyl_A 85 ILVNNAG 91 (247)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665543
No 392
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=44.31 E-value=66 Score=25.25 Aligned_cols=74 Identities=9% Similarity=0.074 Sum_probs=43.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc-cCCcEEEEecCCCHHHHHhhcC------CCceE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~l~------~~~~~ 142 (301)
..+++|+|+..| .....+++.|.+|++.+-.-... ..... .........+..|.+++++.++ .++.+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 78 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS----ADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357788887666 35666788898887754332211 12222 2234566667778777776665 36677
Q ss_pred EEEeCCC
Q 022194 143 VWVESPT 149 (301)
Q Consensus 143 v~i~~~~ 149 (301)
++-+...
T Consensus 79 lv~nAg~ 85 (247)
T 3dii_A 79 LVNNACR 85 (247)
T ss_dssp EEECCC-
T ss_pred EEECCCC
Confidence 6655433
No 393
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=44.14 E-value=16 Score=32.99 Aligned_cols=29 Identities=17% Similarity=0.116 Sum_probs=26.2
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
...|...+++++++.||++|+-||+|-++
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 44688889999999999999999999985
No 394
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=44.06 E-value=62 Score=25.93 Aligned_cols=77 Identities=17% Similarity=0.195 Sum_probs=42.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCC------------CccHHHHHhhhcccCC--cEEEEecCCCHHHHHhh
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL------------YGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASA 135 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~------------y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~ 135 (301)
..+++|+|+..| ..+..+++.|.+|++.+-. ............+..+ +.+...+..|.+.+++.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 467788887666 4667788889888765321 1111111111222223 44445566687777766
Q ss_pred cC------CCceEEEEeCC
Q 022194 136 IG------PWTKLVWVESP 148 (301)
Q Consensus 136 l~------~~~~~v~i~~~ 148 (301)
++ ..+.+++-+..
T Consensus 92 ~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 92 VDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 65 35676665533
No 395
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=43.87 E-value=29 Score=27.80 Aligned_cols=75 Identities=8% Similarity=0.165 Sum_probs=42.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++++|+..+ ..+..+++.|.+|++.+-.-...............+.+...+..|.+.+++.++ ..+.++
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 96 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM 96 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467777777665 456667788888876543211111111111111246666777778888777665 256666
Q ss_pred EEe
Q 022194 144 WVE 146 (301)
Q Consensus 144 ~i~ 146 (301)
+-+
T Consensus 97 i~~ 99 (278)
T 2bgk_A 97 FGN 99 (278)
T ss_dssp EEC
T ss_pred EEC
Confidence 644
No 396
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=43.76 E-value=45 Score=26.18 Aligned_cols=74 Identities=11% Similarity=0.117 Sum_probs=44.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC--CceEEEEeC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP--WTKLVWVES 147 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~--~~~~v~i~~ 147 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-.......+. .. ..+.+...+..+.+.+++.++. ++.+++-+.
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~A 92 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA-LK-DNYTIEVCNLANKEECSNLISKTSNLDILVCNA 92 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HC-SSEEEEECCTTSHHHHHHHHHTCSCCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-hc-cCccEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 578888888666 35667788888888765432222111111 11 2456666777788888777653 566666543
No 397
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=43.76 E-value=1.3e+02 Score=24.33 Aligned_cols=64 Identities=11% Similarity=0.161 Sum_probs=44.7
Q ss_pred cccC-CcEEEEecCC-CHHHHHhhcC-CCceEEEEeCCCCCcc-ccccHHHHHHHHHHcC----CEEEEeCC
Q 022194 114 TPKT-GVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQ-QICDIRKIAEMAHAHG----ALLLVDNS 177 (301)
Q Consensus 114 ~~~~-g~~~~~~~~~-d~~~l~~~l~-~~~~~v~i~~~~np~G-~~~~l~~l~~l~~~~~----~~li~D~~ 177 (301)
++.. |.+++.+-.+ +.+++.++.. .++.+|.++....+.- ....++++++.+++.+ +.+++=..
T Consensus 152 L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 152 LERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp GGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred HHhcCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 7788 9999888765 6777765554 6888888876655311 3456888888888865 55655444
No 398
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=43.66 E-value=13 Score=32.58 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=24.8
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
..|+..+++++++.||++|+-||+|-+.
T Consensus 65 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 65 EYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3577788999999999999999999985
No 399
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=43.44 E-value=27 Score=28.31 Aligned_cols=76 Identities=13% Similarity=0.083 Sum_probs=41.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-..-.......+...+ +.+...+..|.+++++.++ ..+.
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 109 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRID 109 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 567888887666 35667788898887654211111111111222233 4444555557666665554 3667
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 110 ~lvnnA 115 (280)
T 4da9_A 110 CLVNNA 115 (280)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 766554
No 400
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=43.44 E-value=23 Score=30.96 Aligned_cols=92 Identities=11% Similarity=0.096 Sum_probs=61.0
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-C-CHHHHHhhcCC-CceEEEEeCCCCCcccccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-C-DLDEVASAIGP-WTKLVWVESPTNPRQQICD 157 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~-d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~ 157 (301)
+++..+...+.+-+-..+.+|....-...+..+.+...+.+..=.. . +..++.+.+.. ...+|.+. + +-.|.+.+
T Consensus 271 ~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGite 348 (427)
T 2pa6_A 271 ELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLLK-V-NQIGTLSE 348 (427)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-H-HHHCSHHH
T ss_pred HHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEEc-c-cccCCHHH
Confidence 5555544455555677899997665555555555555665544332 2 47888887764 34454433 2 33788999
Q ss_pred HHHHHHHHHHcCCEEEE
Q 022194 158 IRKIAEMAHAHGALLLV 174 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~ 174 (301)
..+++++|+++|+.+++
T Consensus 349 a~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 349 AVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp HHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 99999999999998776
No 401
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=43.37 E-value=76 Score=25.21 Aligned_cols=78 Identities=13% Similarity=0.061 Sum_probs=43.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc---cCCcEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP---KTGVVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~---~~g~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.........+.. ...+.....+..|.+++++.++ ..+
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA 88 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 467778777666 35667788888887765432222211112211 1224555566667777766654 356
Q ss_pred eEEEEeCCC
Q 022194 141 KLVWVESPT 149 (301)
Q Consensus 141 ~~v~i~~~~ 149 (301)
.+++-+...
T Consensus 89 d~lvnnAg~ 97 (265)
T 3lf2_A 89 SILVNNAGQ 97 (265)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 666655433
No 402
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=43.36 E-value=1e+02 Score=24.69 Aligned_cols=74 Identities=16% Similarity=0.159 Sum_probs=43.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-... ....... .+....++..|.+++++.++ .++.
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAA----VRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 567888887666 35667788898888765332211 1222222 34555566668777776664 3667
Q ss_pred EEEEeCCC
Q 022194 142 LVWVESPT 149 (301)
Q Consensus 142 ~v~i~~~~ 149 (301)
+++-+...
T Consensus 104 ~lv~nAg~ 111 (277)
T 4dqx_A 104 VLVNNAGF 111 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 76655443
No 403
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=43.32 E-value=18 Score=28.48 Aligned_cols=92 Identities=11% Similarity=0.054 Sum_probs=49.1
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC-----CCceEEEEeCCCCCcccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-----PWTKLVWVESPTNPRQQI 155 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~-----~~~~~v~i~~~~np~G~~ 155 (301)
.++..+.++...|.+|++..|....- ....++...|+....++..+.+++.+.+. .+..+|++.-.+.-+ .
T Consensus 28 ~ll~~~~r~~~~g~kVli~~~~~d~r--~~~~i~srlG~~~~~~~~~~~~~i~~~i~~~~~~~~~dvViIDEaQ~l~--~ 103 (223)
T 2b8t_A 28 ELIRRLHRLEYADVKYLVFKPKIDTR--SIRNIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQFFD--D 103 (223)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCGG--GCSSCCCCCCCSSCCEEESSTHHHHHHHHSTTSCTTCCEEEECSGGGSC--T
T ss_pred HHHHHHHHHHhcCCEEEEEEeccCch--HHHHHHHhcCCCccccccCCHHHHHHHHHHHhhCCCCCEEEEecCccCc--H
Confidence 34456777777788888775544321 11244555554332222234444444433 357889988776522 1
Q ss_pred ccHHHHHHHHHHcCCEEEEeCC
Q 022194 156 CDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~~ 177 (301)
.-++.+..+++ .++.+|+=.-
T Consensus 104 ~~ve~l~~L~~-~gi~Vil~Gl 124 (223)
T 2b8t_A 104 RICEVANILAE-NGFVVIISGL 124 (223)
T ss_dssp HHHHHHHHHHH-TTCEEEEECC
T ss_pred HHHHHHHHHHh-CCCeEEEEec
Confidence 12445555555 4887777543
No 404
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=43.18 E-value=80 Score=24.82 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=43.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++++|+..+ ..+..+++.|.+|++..-.-.......... ...+.+...+..|.+.+++.++ ..+.++
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 467777777665 466667788888876543323222222111 1235566667668877776664 256676
Q ss_pred EEeC
Q 022194 144 WVES 147 (301)
Q Consensus 144 ~i~~ 147 (301)
+-+.
T Consensus 91 i~~A 94 (265)
T 2o23_A 91 VNCA 94 (265)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 405
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=43.01 E-value=24 Score=32.04 Aligned_cols=49 Identities=18% Similarity=0.325 Sum_probs=37.2
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCC
Q 022194 129 LDEVASAIGPWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 129 ~~~l~~~l~~~~~~v~i~~~~np~G~~~~-l~~l~~l~~~~~~~li~D~~ 177 (301)
.+.++++++.....|.+-..+.+...... .++|.++|++|++.||+++-
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND~ 77 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDR 77 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECSC
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeCc
Confidence 46778888888888888766655554443 67789999999999888764
No 406
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.97 E-value=77 Score=25.27 Aligned_cols=75 Identities=5% Similarity=-0.007 Sum_probs=41.2
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhc--cc--CCcEEEEecCCCHHHHHhhcC------CC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT--PK--TGVVVKRVNTCDLDEVASAIG------PW 139 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~--~~--~g~~~~~~~~~d~~~l~~~l~------~~ 139 (301)
..+++|+|+..+ ..+..+++.|.+|++..-.-.......+.+. .. ..+.+...+..|.+.+++.++ ..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 86 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence 467888887666 3566677888888765432111111111110 11 134555566668777776664 25
Q ss_pred ceEEEEe
Q 022194 140 TKLVWVE 146 (301)
Q Consensus 140 ~~~v~i~ 146 (301)
+.+++-+
T Consensus 87 id~lv~~ 93 (278)
T 1spx_A 87 LDILVNN 93 (278)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 6666644
No 407
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=42.85 E-value=44 Score=27.15 Aligned_cols=69 Identities=9% Similarity=0.132 Sum_probs=42.4
Q ss_pred CCCccHHHHHhhhcccCCcEEEEecCC-CH----HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 101 DLYGGTDRLLSRVTPKTGVVVKRVNTC-DL----DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 101 ~~y~~~~~~~~~~~~~~g~~~~~~~~~-d~----~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
|.|......++..++..|..+...... +. +.++..+..++.+|++...... .+.+..+.+++.++++|.
T Consensus 15 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~~~~~~~~~~iPvV~ 88 (313)
T 3m9w_A 15 ERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQ-----VLSNVVKEAKQEGIKVLA 88 (313)
T ss_dssp STTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTT-----SCHHHHHHHHTTTCEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh-----hhHHHHHHHHHCCCeEEE
Confidence 444545555667778888888877754 33 2344445567888887654321 234566667777876654
No 408
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=42.82 E-value=78 Score=25.33 Aligned_cols=71 Identities=20% Similarity=0.174 Sum_probs=40.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC-----CCceE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG-----PWTKL 142 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~-----~~~~~ 142 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.... ...+. ..+.+..++..|.+.+++.++ .....
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGK----ALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 467788887666 356677888988877643322221 22222 235556666667777666554 24455
Q ss_pred EEEe
Q 022194 143 VWVE 146 (301)
Q Consensus 143 v~i~ 146 (301)
++.+
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5544
No 409
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=42.66 E-value=15 Score=32.65 Aligned_cols=27 Identities=30% Similarity=0.477 Sum_probs=24.8
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
.|+..+++++++.||++|+-||+|-++
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 577888999999999999999999995
No 410
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=42.62 E-value=93 Score=26.92 Aligned_cols=113 Identities=13% Similarity=0.018 Sum_probs=63.7
Q ss_pred HHHHhhcCCCceEEe--cchH---HHHHHHHhccCCCCeEEEcCC-CCccHHHHHhhhcccCCcEEEEecC-CCHHHHHh
Q 022194 62 SLLAKLDKADRALCF--TSGM---AALAAVTHLLGTGEEIVAGDD-LYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVAS 134 (301)
Q Consensus 62 ~~l~~~~~~~~~i~~--~sG~---~ai~~~~~~~~~g~~Vlv~~~-~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~ 134 (301)
+.+.+.+|.+-.+.+ ++|. +|+..+.. +.+-+-.++..| ........+..+.+..++.+..-.. .+.+++++
T Consensus 204 ~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~-L~~~~i~~iEqP~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 282 (410)
T 3dip_A 204 RKIRAAVGQRIEIMCELHSLWGTHAAARICNA-LADYGVLWVEDPIAKMDNIPAVADLRRQTRAPICGGENLAGTRRFHE 282 (410)
T ss_dssp HHHHHHHTTSSEEEEECTTCBCHHHHHHHHHH-GGGGTCSEEECCBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHH
T ss_pred HHHHHHcCCCceEEEECCCCCCHHHHHHHHHH-HHhcCCCEEECCCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHH
Confidence 445556665533433 3332 44433333 333334466677 4443333344444444554443332 26778887
Q ss_pred hcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 135 AIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 135 ~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
.+.. ...+|.+. +. ..|.+.+..+++++|+++|+.+..=..
T Consensus 283 ~l~~~~~d~v~~k-~~-~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 283 MLCADAIDFVMLD-LT-WCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp HHHTTCCSEEEEC-TT-TSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred HHHcCCCCeEeec-cc-ccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 7764 34554443 33 378899999999999999998876444
No 411
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=42.54 E-value=53 Score=26.29 Aligned_cols=73 Identities=12% Similarity=0.086 Sum_probs=43.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|..|++.+-.-... +...+..+ +.+...+..|.+++++.++ ..+.
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKL----KEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 577888888666 35667788898887764332222 22222223 4455556668777776664 3667
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 104 ~lvnnAg 110 (266)
T 3grp_A 104 ILVNNAG 110 (266)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665433
No 412
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=42.49 E-value=86 Score=25.52 Aligned_cols=76 Identities=17% Similarity=0.160 Sum_probs=43.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-....... ..++.. .+.+..++..|.+.+++.++ ..+.
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 110 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAV-NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 467788887666 356667888888877654322222111 112222 34555566668777776664 3567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 111 ~lvnnAg 117 (301)
T 3tjr_A 111 VVFSNAG 117 (301)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665543
No 413
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=42.41 E-value=82 Score=24.85 Aligned_cols=76 Identities=11% Similarity=0.139 Sum_probs=42.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCcc-HHHHHhhhcc--cCCcEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-TDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~-~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.. .......+.. ...+.+...+..|.+++++.++ ..+
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 84 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 457788887666 3566678888888775433222 2111111111 1234444556667777776664 356
Q ss_pred eEEEEeC
Q 022194 141 KLVWVES 147 (301)
Q Consensus 141 ~~v~i~~ 147 (301)
.+++-+.
T Consensus 85 D~lv~~A 91 (260)
T 1x1t_A 85 DILVNNA 91 (260)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 7766543
No 414
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=42.31 E-value=44 Score=26.99 Aligned_cols=22 Identities=14% Similarity=-0.010 Sum_probs=13.9
Q ss_pred HHHHHHHHHhhcCCCceEEecc
Q 022194 57 RDALESLLAKLDKADRALCFTS 78 (301)
Q Consensus 57 ~~~l~~~l~~~~~~~~~i~~~s 78 (301)
..+|+++|.+.||.++++++.+
T Consensus 13 ~~~Le~~L~~~fgL~~v~Vvp~ 34 (266)
T 3efb_A 13 NLWLEQQLKQKFGLKDVVVVSG 34 (266)
T ss_dssp CHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHHHhCCCEEEEEcC
Confidence 4566666777777666666644
No 415
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=42.23 E-value=71 Score=25.09 Aligned_cols=88 Identities=14% Similarity=0.119 Sum_probs=51.5
Q ss_pred CceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 71 ~~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
..++++++|..|...+..+++.|-.|.+.+|....-. .......++.+..-.. +.+++ ....+|+.+ +.+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l---~~l~~~~~i~~i~~~~-~~~dL-----~~adLVIaA-T~d 101 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEI---NEWEAKGQLRVKRKKV-GEEDL-----LNVFFIVVA-TND 101 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHH---HHHHHTTSCEEECSCC-CGGGS-----SSCSEEEEC-CCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHH---HHHHHcCCcEEEECCC-CHhHh-----CCCCEEEEC-CCC
Confidence 3688999998888888888888888877777655433 2333444454432221 22222 244555533 333
Q ss_pred CccccccHHHHHHHHHHcCCEEE
Q 022194 151 PRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li 173 (301)
+ .--..+.+.|+ .++++-
T Consensus 102 ~----~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 102 Q----AVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp T----HHHHHHHHHSC-TTCEEE
T ss_pred H----HHHHHHHHHHh-CCCEEE
Confidence 2 22456777777 787643
No 416
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=42.22 E-value=56 Score=27.01 Aligned_cols=77 Identities=16% Similarity=0.191 Sum_probs=42.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc---cCCcEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP---KTGVVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~---~~g~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-.........+.. ...+.+..++..|.+.+++.++ ..+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV 88 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence 467778877655 46667788888887654332222111111111 1135556666668777766654 356
Q ss_pred eEEEEeCC
Q 022194 141 KLVWVESP 148 (301)
Q Consensus 141 ~~v~i~~~ 148 (301)
.+++-+..
T Consensus 89 d~lv~nAg 96 (319)
T 3ioy_A 89 SILCNNAG 96 (319)
T ss_dssp EEEEECCC
T ss_pred CEEEECCC
Confidence 66665433
No 417
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=42.13 E-value=1.2e+02 Score=25.81 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=45.0
Q ss_pred cCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHHHHHH
Q 022194 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHA 167 (301)
Q Consensus 90 ~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~l~~~-~~~v~i~~~~np~G~~~~l~~l~~l~~~ 167 (301)
+.+-+-.++..|........+..+.+..++.+..-.. .+.+++++.+... ..+|.+. -+..|.+.+..+++++|++
T Consensus 220 l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k--~~~~GGit~~~~ia~~A~~ 297 (372)
T 3tj4_A 220 AKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPD--VTRLGGITEYIQVADLALA 297 (372)
T ss_dssp TTTSCEEEEESCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC--TTTTTHHHHHHHHHHHHHH
T ss_pred HhhcCCCEEECCCCchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeC--ccccCCHHHHHHHHHHHHH
Confidence 3333444566665433333333333334444332221 2566666666533 3333322 2346888899999999999
Q ss_pred cCCEEEE
Q 022194 168 HGALLLV 174 (301)
Q Consensus 168 ~~~~li~ 174 (301)
+|+.+..
T Consensus 298 ~gi~~~~ 304 (372)
T 3tj4_A 298 HRLPVVP 304 (372)
T ss_dssp TTCCBCC
T ss_pred cCCEEEe
Confidence 9987653
No 418
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=41.83 E-value=69 Score=27.24 Aligned_cols=48 Identities=10% Similarity=-0.018 Sum_probs=34.7
Q ss_pred CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 128 d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
+..++++.+.. ...+|.+. +. ..|.+.+..+++++|+++|+.+.+-..
T Consensus 246 ~~~~~~~~~~~~~~d~v~~k-~~-~~GGit~~~~i~~~A~~~gi~~~~~~~ 294 (368)
T 3q45_A 246 NSFDAERLIQIQACDSFNLK-LS-KSAGITNALNIIRLAEQAHMPVQVGGF 294 (368)
T ss_dssp SHHHHHHHHHTTCCSEEEEC-TT-TTTSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred CHHHHHHHHHcCCCCeEEec-hh-hcCCHHHHHHHHHHHHHcCCcEEecCc
Confidence 67777777754 34554443 33 378889999999999999998887543
No 419
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=41.82 E-value=88 Score=25.06 Aligned_cols=75 Identities=13% Similarity=0.101 Sum_probs=42.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC-----CcEEEEecCCCHHHHHhhcC------C
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-----GVVVKRVNTCDLDEVASAIG------P 138 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~-----g~~~~~~~~~d~~~l~~~l~------~ 138 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-......... ++.. .+.+...+..|.+++++.++ .
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQE-LEALGANGGAIRYEPTDITNEDETARAVDAVTAWHG 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 467788887666 35667788898887764332222211111 2222 23444555667777776664 3
Q ss_pred CceEEEEeC
Q 022194 139 WTKLVWVES 147 (301)
Q Consensus 139 ~~~~v~i~~ 147 (301)
++.+++-+.
T Consensus 91 ~id~lv~nA 99 (281)
T 3svt_A 91 RLHGVVHCA 99 (281)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 566666543
No 420
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=41.69 E-value=56 Score=25.60 Aligned_cols=36 Identities=19% Similarity=0.124 Sum_probs=28.9
Q ss_pred CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 138 PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 138 ~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
-.+.+|+.+-. |..|......++.+++++||+.++.
T Consensus 166 l~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 46677766644 6679999999999999999998764
No 421
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=41.67 E-value=24 Score=31.11 Aligned_cols=94 Identities=15% Similarity=0.112 Sum_probs=62.0
Q ss_pred HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecC--CCHHHHHhhcCC-CceEEEEeCCCCCcccc
Q 022194 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQI 155 (301)
Q Consensus 81 ~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~--~d~~~l~~~l~~-~~~~v~i~~~~np~G~~ 155 (301)
+++..+..+.++-+...+.+|....-...+..+.+.. .+.+..=+. .+..++.+.+.. ...+|.+. .+..|.+
T Consensus 283 eai~~~~~l~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik--~~~~GGi 360 (444)
T 1w6t_A 283 EQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK--VNQIGTL 360 (444)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC--HHHHCSH
T ss_pred HHHHHHHHHHHhCCcEEEECCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc--ccccCCH
Confidence 5555555555434577899998765555555555554 455543332 367888887763 34555443 3447889
Q ss_pred ccHHHHHHHHHHcCCEEEEeC
Q 022194 156 CDIRKIAEMAHAHGALLLVDN 176 (301)
Q Consensus 156 ~~l~~l~~l~~~~~~~li~D~ 176 (301)
.+..+++++|+++|+.+++-.
T Consensus 361 tea~~ia~lA~~~g~~v~~~h 381 (444)
T 1w6t_A 361 TETFEAIEMAKEAGYTAVVSH 381 (444)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHCCCeEEecC
Confidence 999999999999999888743
No 422
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=41.66 E-value=14 Score=33.19 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=24.5
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
.|+..++++|++.||++|+-||.|-++
T Consensus 76 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 76 YGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 477778999999999999999999985
No 423
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=41.47 E-value=17 Score=31.82 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=26.5
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
+...|+..++++|++.||++|+-||.|-++-
T Consensus 75 dp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 75 DPNFGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3345778899999999999999999999853
No 424
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=41.42 E-value=16 Score=31.69 Aligned_cols=29 Identities=14% Similarity=0.245 Sum_probs=25.5
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
..|...+++++++.||++|+-||+|-++-
T Consensus 64 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 64 KYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 34778889999999999999999999953
No 425
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=41.41 E-value=13 Score=32.99 Aligned_cols=83 Identities=10% Similarity=0.026 Sum_probs=47.2
Q ss_pred CCeEEEcCCCC--ccHHHHHhhhcccCCcEEEEecCCCHHHH--Hhhc-CC-CceEEEEeCCCCCccccccHHHHHHHHH
Q 022194 93 GEEIVAGDDLY--GGTDRLLSRVTPKTGVVVKRVNTCDLDEV--ASAI-GP-WTKLVWVESPTNPRQQICDIRKIAEMAH 166 (301)
Q Consensus 93 g~~Vlv~~~~y--~~~~~~~~~~~~~~g~~~~~~~~~d~~~l--~~~l-~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~ 166 (301)
++.|++.-..+ .+...-+...++..|+..+++.+.-...- .... .. .+.- + .++...|...+++++++.||
T Consensus 9 ~~~~i~~~F~w~~~gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~d-y--~idp~~Gt~~d~~~lv~~~h 85 (471)
T 1jae_A 9 GRNSIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVS-Y--IINTRSGDESAFTDMTRRCN 85 (471)
T ss_dssp TCEEEEEETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCC-S--CSEETTEEHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHcCCCEEEeCccccccCCCCCCccccccccc-c--cccCCCCCHHHHHHHHHHHH
Confidence 45566544333 22222111346788888888876410000 0000 00 0000 1 33444688889999999999
Q ss_pred HcCCEEEEeCCc
Q 022194 167 AHGALLLVDNSI 178 (301)
Q Consensus 167 ~~~~~li~D~~~ 178 (301)
++|+-||+|-++
T Consensus 86 ~~Gi~VilD~V~ 97 (471)
T 1jae_A 86 DAGVRIYVDAVI 97 (471)
T ss_dssp HTTCEEEEEECC
T ss_pred HCCCEEEEEEec
Confidence 999999999985
No 426
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=41.37 E-value=1.2e+02 Score=23.65 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=41.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++++|+..+ ..+..+++.|.+|++.+-.-.......... ...+.+...+..|.+++++.++ ..+.++
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467788887666 356667788888877543321111111111 1234455556667777766654 256666
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 85 v~~Ag 89 (253)
T 1hxh_A 85 VNNAG 89 (253)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65433
No 427
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=41.21 E-value=96 Score=24.85 Aligned_cols=76 Identities=11% Similarity=0.097 Sum_probs=41.2
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-......+...+...+ +.+...+..|.+++++.++ ..+.
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 109 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLD 109 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888887666 36666788888887643221111111111122223 4445556667777666554 3566
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 110 ~lv~~A 115 (283)
T 1g0o_A 110 IVCSNS 115 (283)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 428
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=41.19 E-value=89 Score=27.42 Aligned_cols=97 Identities=11% Similarity=0.135 Sum_probs=53.4
Q ss_pred ceEEecchHHHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC-cEEEEecCCCHHHHHhhcCCCceEEEEeCCCC
Q 022194 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (301)
Q Consensus 72 ~~i~~~sG~~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g-~~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~n 150 (301)
.++++++|.-+-..+..+.+.|.+|.+.+..- ...+......+ .....++..|.+.+++.+. +..+|+.+.+..
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~----~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-~~DvVIn~a~~~ 79 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL----ESAKKLSAGVQHSTPISLDVNDDAALDAEVA-KHDLVISLIPYT 79 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESSH----HHHHHTTTTCTTEEEEECCTTCHHHHHHHHT-TSSEEEECCC--
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECCH----HHHHHHHHhcCCceEEEeecCCHHHHHHHHc-CCcEEEECCccc
Confidence 35566555433334444556677777654331 11223333332 4555566677888887775 677777766543
Q ss_pred Ccc----------cc--------ccHHHHHHHHHHcCCEEE
Q 022194 151 PRQ----------QI--------CDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 151 p~G----------~~--------~~l~~l~~l~~~~~~~li 173 (301)
... .. ....++.+.|++.|+.++
T Consensus 80 ~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i 120 (450)
T 1ff9_A 80 FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVM 120 (450)
T ss_dssp CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEE
T ss_pred cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEE
Confidence 221 11 124678888888888754
No 429
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=41.05 E-value=1.1e+02 Score=23.97 Aligned_cols=75 Identities=8% Similarity=0.085 Sum_probs=43.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| .....+++.|.+|++.+..-....... ..... ......++..|.+++++.++ ..+.++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 87 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS-DYLGD-NGKGMALNVTNPESIEAVLKAITDEFGGVDIL 87 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHHGG-GEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhcc-cceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467888887666 366678888988887643322221111 11111 23555666668877776665 366776
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 88 v~nAg 92 (248)
T 3op4_A 88 VNNAG 92 (248)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65533
No 430
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=40.84 E-value=18 Score=24.20 Aligned_cols=21 Identities=14% Similarity=0.146 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCEEEEeCCc
Q 022194 158 IRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~ 178 (301)
-.+|.++|+++|++++.|...
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEECHHH
Confidence 577999999999999999863
No 431
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=40.75 E-value=27 Score=28.15 Aligned_cols=74 Identities=12% Similarity=0.120 Sum_probs=42.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEe--cCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~--~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| .....|.+.|-+|++.+-.-....... .-++..|.++..+ +..|.+++++.++ .++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD 86 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRID 86 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 567888887676 355667888988887654322222222 2233445555444 4447777776664 3566
Q ss_pred EEEEe
Q 022194 142 LVWVE 146 (301)
Q Consensus 142 ~v~i~ 146 (301)
+++-+
T Consensus 87 iLVNN 91 (254)
T 4fn4_A 87 VLCNN 91 (254)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 65533
No 432
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=40.69 E-value=16 Score=32.48 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=25.7
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
...|...+++++++.||++|+-||+|-+.
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34577889999999999999999999985
No 433
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=40.67 E-value=96 Score=26.50 Aligned_cols=48 Identities=17% Similarity=0.172 Sum_probs=32.5
Q ss_pred CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 128 d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
+.+++++.+.. ...+|.+. + +..|.+.+..+++++|+++|+.+.+=..
T Consensus 256 ~~~~~~~~i~~~~~d~v~~k-~-~~~GGit~~~~ia~~A~~~gi~~~~~~~ 304 (383)
T 3i4k_A 256 TPAEALAVVKAQAADVIALK-T-TKHGGLLESKKIAAIAEAGGLACHGATS 304 (383)
T ss_dssp SHHHHHHHHHHTCCSEEEEC-T-TTTTSHHHHHHHHHHHHHTTCEEEECCS
T ss_pred CHHHHHHHHHcCCCCEEEEc-c-cccCCHHHHHHHHHHHHHcCCeEEeCCC
Confidence 55666666643 34454443 2 3368888899999999999998876443
No 434
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=40.58 E-value=94 Score=24.84 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=42.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCC-----------ccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLY-----------GGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAI 136 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y-----------~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l 136 (301)
..+++|+|+..| .....+++.|.+|++.+-.- ...........+..+ +.+...+..|.+++++.+
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 467788887666 35667788898887654321 001111112222333 344445555777776666
Q ss_pred C------CCceEEEEeCC
Q 022194 137 G------PWTKLVWVESP 148 (301)
Q Consensus 137 ~------~~~~~v~i~~~ 148 (301)
+ ..+.+++-+..
T Consensus 91 ~~~~~~~g~id~lv~nAg 108 (281)
T 3s55_A 91 AEAEDTLGGIDIAITNAG 108 (281)
T ss_dssp HHHHHHHTCCCEEEECCC
T ss_pred HHHHHhcCCCCEEEECCC
Confidence 4 36676665433
No 435
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=40.49 E-value=49 Score=27.37 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=51.9
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCC---------ccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-Cc
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLY---------GGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WT 140 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y---------~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~ 140 (301)
.+++++|+..+ .++..+++.|.+|++.+..- ......+... ...++.+...+..|.+.++++++. .+
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (348)
T 1ek6_A 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKKYSF 82 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc-cCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 46677766444 45566777787776543211 1111111111 123567777787888888887763 56
Q ss_pred eEEEEeCCCCCcccc-c-----------cHHHHHHHHHHcCC
Q 022194 141 KLVWVESPTNPRQQI-C-----------DIRKIAEMAHAHGA 170 (301)
Q Consensus 141 ~~v~i~~~~np~G~~-~-----------~l~~l~~l~~~~~~ 170 (301)
.+|+-+......+.. . -...+++.|++.++
T Consensus 83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 124 (348)
T 1ek6_A 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124 (348)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 666654332221111 1 13457777887764
No 436
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=40.47 E-value=57 Score=27.64 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=32.0
Q ss_pred CHHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 128 d~~~l~~~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
+.+++++.+.. ...+|.+. + +..|.+.+..+++++|+++|+.+++=..
T Consensus 244 ~~~~~~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~~~~ 292 (368)
T 1sjd_A 244 SARAAADAIKLGAVQIVNIK-P-GRVGGYLEARRVHDVCAAHGIPVWCGGM 292 (368)
T ss_dssp SHHHHHHHHHTTCCSEEEEC-T-TTTTSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CHHHHHHHHHcCCCCEEEec-c-cccCCHHHHHHHHHHHHHcCCcEEeCCc
Confidence 55666666643 34454443 3 4478888899999999999998554433
No 437
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=40.40 E-value=17 Score=31.86 Aligned_cols=28 Identities=18% Similarity=0.350 Sum_probs=24.5
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
..|...+++++++.||++|+-||+|-+.
T Consensus 79 ~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 79 EYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3466678999999999999999999985
No 438
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=40.08 E-value=1.7e+02 Score=24.76 Aligned_cols=110 Identities=7% Similarity=0.020 Sum_probs=62.5
Q ss_pred HHHHhhcCCCceEEe--cchH---HHHHHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHHhh
Q 022194 62 SLLAKLDKADRALCF--TSGM---AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASA 135 (301)
Q Consensus 62 ~~l~~~~~~~~~i~~--~sG~---~ai~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~ 135 (301)
+.+.+..|.+-.+.+ ++|. +++..+.. +.+-+- .+..|.. ....+..+.+..++.+..... .+.+++++.
T Consensus 180 ~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~-l~~~~i-~iE~P~~--~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~ 255 (379)
T 2rdx_A 180 RACLPLLEPGEKAMADANQGWRVDNAIRLARA-TRDLDY-ILEQPCR--SYEECQQVRRVADQPMKLDECVTGLHMAQRI 255 (379)
T ss_dssp HHHGGGSCTTCEEEEECTTCSCHHHHHHHHHH-TTTSCC-EEECCSS--SHHHHHHHHTTCCSCEEECTTCCSHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCCCHHHHHHHHHH-HHhCCe-EEeCCcC--CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHH
Confidence 444555554433332 3332 33333333 443334 7777754 333344444455555444332 267777777
Q ss_pred cCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 136 IGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 136 l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
+.. ...+|.+. -+..|.+.+..+++++|+++|+.+++=..
T Consensus 256 i~~~~~d~v~ik--~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 296 (379)
T 2rdx_A 256 VADRGAEICCLK--ISNLGGLSKARRTRDFLIDNRMPVVAEDS 296 (379)
T ss_dssp HHHTCCSEEEEE--TTTTTSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred HHcCCCCEEEEe--ccccCCHHHHHHHHHHHHHcCCeEEEeec
Confidence 763 45566554 23478889999999999999987776643
No 439
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=39.89 E-value=1.1e+02 Score=24.81 Aligned_cols=92 Identities=24% Similarity=0.266 Sum_probs=50.3
Q ss_pred EEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeCCCC
Q 022194 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTN 150 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~~n 150 (301)
+++++|+..+ .++..+++.|.+|.+.+..-.... .... .++.+...+..|.+.++++++. .+..|+......
T Consensus 3 vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~ 77 (311)
T 2p5y_A 3 VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR----ENVP-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA 77 (311)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG----GGSC-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch----hhcc-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc
Confidence 5677776555 456667888888876543211111 1111 3456666777788888877753 455655443222
Q ss_pred Cccc-ccc-----------HHHHHHHHHHcCC
Q 022194 151 PRQQ-ICD-----------IRKIAEMAHAHGA 170 (301)
Q Consensus 151 p~G~-~~~-----------l~~l~~l~~~~~~ 170 (301)
..+. ..+ ...+++.|++.++
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~ 109 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGV 109 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111 011 3457777887764
No 440
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=39.88 E-value=67 Score=25.66 Aligned_cols=75 Identities=17% Similarity=0.135 Sum_probs=43.2
Q ss_pred hcCCC-ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEe--cCCCHHHHHhhcCC-Cc
Q 022194 67 LDKAD-RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIGP-WT 140 (301)
Q Consensus 67 ~~~~~-~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~--~~~d~~~l~~~l~~-~~ 140 (301)
.|..+ ...++|+|+..| .....|.+.|-+|++.+-.-. .+.. ..++..|.+...+ +..|.+++++.+.. ..
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~-~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~i 80 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETL-DIIAKDGGNASALLIDFADPLAAKDSFTDAGF 80 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHH-HHHHHTTCCEEEEECCTTSTTTTTTSSTTTCC
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHH-HHHHHhCCcEEEEEccCCCHHHHHHHHHhCCC
Confidence 34444 578888888777 356778888988887653321 1122 3334445444444 44477777766653 44
Q ss_pred eEEE
Q 022194 141 KLVW 144 (301)
Q Consensus 141 ~~v~ 144 (301)
.+++
T Consensus 81 DiLV 84 (247)
T 4hp8_A 81 DILV 84 (247)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 4444
No 441
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=39.84 E-value=62 Score=26.46 Aligned_cols=68 Identities=15% Similarity=0.235 Sum_probs=36.8
Q ss_pred CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------CHH---HHHhhcC-CCceEEEEeCCCCCccccccHHHH
Q 022194 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLD---EVASAIG-PWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 92 ~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d~~---~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
++..+++..+.|. .+++.+|++...+... ++. ++.+.++ .++++|+.+.-.++ +-.
T Consensus 178 ~~~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFS-------YLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCH-------HHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 4677888766654 4556788876654321 333 3333333 46667666544333 222
Q ss_pred HHHHHHcCCEEE
Q 022194 162 AEMAHAHGALLL 173 (301)
Q Consensus 162 ~~l~~~~~~~li 173 (301)
-.++++.|+.++
T Consensus 244 ~~la~~~g~~v~ 255 (286)
T 3gi1_A 244 HAIAKSTGAKVK 255 (286)
T ss_dssp HHHHHTTTCEEE
T ss_pred HHHHHHhCCeEE
Confidence 344666666554
No 442
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=39.82 E-value=79 Score=25.86 Aligned_cols=99 Identities=12% Similarity=-0.001 Sum_probs=53.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCcc-HHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVES 147 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~-~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~ 147 (301)
.-+++|+|+..+ .++..+++.|.+|++..-.-.. ....+.......++.+...+..|.+.++++++. ++.+|+-+.
T Consensus 15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A 94 (335)
T 1rpn_A 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 94 (335)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence 457777777555 3556677778887654322111 001111221233566777777788888887764 456666543
Q ss_pred CCCCccc-ccc-----------HHHHHHHHHHcCC
Q 022194 148 PTNPRQQ-ICD-----------IRKIAEMAHAHGA 170 (301)
Q Consensus 148 ~~np~G~-~~~-----------l~~l~~l~~~~~~ 170 (301)
....... ..+ ...+++.|++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 129 (335)
T 1rpn_A 95 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP 129 (335)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT
T ss_pred cccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3221110 111 3457788887753
No 443
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=39.73 E-value=96 Score=23.95 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=44.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc-cCCcEEEEecCCCHHHHHhhcCC--CceEEEEe
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIGP--WTKLVWVE 146 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~-~~g~~~~~~~~~d~~~l~~~l~~--~~~~v~i~ 146 (301)
..+++++|+..+ ..+..+++.|.+|++.+..-.... ...+ ..+.++...+..|.+.+++.++. .+.+|+-+
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV----SLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence 357777777555 456667778888876543211111 1111 23567777777788888888863 46666654
Q ss_pred CC
Q 022194 147 SP 148 (301)
Q Consensus 147 ~~ 148 (301)
..
T Consensus 84 Ag 85 (244)
T 1cyd_A 84 AA 85 (244)
T ss_dssp CC
T ss_pred Cc
Confidence 33
No 444
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=39.63 E-value=12 Score=35.29 Aligned_cols=26 Identities=15% Similarity=0.400 Sum_probs=23.0
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 154 QICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 154 ~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
...+++++++.||++|+-||.|-++-
T Consensus 314 ~~~dfk~LV~~aH~~GI~VIlDvV~N 339 (718)
T 2e8y_A 314 RKTELKQMINTLHQHGLRVILDVVFN 339 (718)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 45789999999999999999999863
No 445
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=39.63 E-value=1.4e+02 Score=23.78 Aligned_cols=76 Identities=8% Similarity=0.046 Sum_probs=42.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++++|+..+ ..+..+++.|.+|++..-.-....... ..++..+ +.+...+..|.+.+++.++ ..+.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id 123 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 123 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 467788887666 466678888888877432211111111 1122223 4455556668887777664 3566
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+|+-+..
T Consensus 124 ~li~~Ag 130 (285)
T 2c07_A 124 ILVNNAG 130 (285)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665533
No 446
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=39.53 E-value=39 Score=27.57 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=42.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCc-cHHHHHhhhcccCCcEEEEec--CCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYG-GTDRLLSRVTPKTGVVVKRVN--TCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~-~~~~~~~~~~~~~g~~~~~~~--~~d~~~l~~~l~------~~~ 140 (301)
..+++|+|+..| .....+++.|.+|++....-. ..........+..+.++..+. ..|.+.+++.++ ..+
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 129 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGL 129 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 467888887666 466678888988887543211 111112233334444454444 447776666554 356
Q ss_pred eEEEEeC
Q 022194 141 KLVWVES 147 (301)
Q Consensus 141 ~~v~i~~ 147 (301)
.+++-+.
T Consensus 130 D~lv~nA 136 (294)
T 3r3s_A 130 DILALVA 136 (294)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 447
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=39.45 E-value=36 Score=27.49 Aligned_cols=64 Identities=16% Similarity=0.101 Sum_probs=41.3
Q ss_pred HHHHhhhcccCCcEEEEecCCCHHH----HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE-Ee
Q 022194 107 DRLLSRVTPKTGVVVKRVNTCDLDE----VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL-VD 175 (301)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~d~~~----l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li-~D 175 (301)
...++..++..|.++..++..|.+. ++..+..++.+|++..... .......+.+++.++++| +|
T Consensus 21 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~-----~~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 21 WKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDP-----KLGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEECSCG-----GGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc-----hhhHHHHHHHHHCCCcEEEeC
Confidence 3445566777888888877666543 4445557788888775432 134555666778898766 44
No 448
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=39.37 E-value=77 Score=24.89 Aligned_cols=76 Identities=11% Similarity=0.080 Sum_probs=41.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc--cCCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++++|+..+ ..+..+++.|.+|++..-.-............ ...+.+...+..|.+.+++.++ ..+.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 94 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS 94 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 457777777665 45666777887776554322222211222221 1234555666668777766654 2456
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 95 ~li~~A 100 (265)
T 1h5q_A 95 GLIANA 100 (265)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 449
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=39.31 E-value=1.1e+02 Score=24.68 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCc-------cHHHHHhhhcccCCcEEE--EecCCCHHHHHhhcC---
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYG-------GTDRLLSRVTPKTGVVVK--RVNTCDLDEVASAIG--- 137 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~-------~~~~~~~~~~~~~g~~~~--~~~~~d~~~l~~~l~--- 137 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-. ...... ..++..+.++. .++..|.+++++.++
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 88 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAA-KEIEEAGGQALPIVGDIRDGDAVAAAVAKTV 88 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHH-HHHHHHTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 467778877666 466678888888876543222 111111 11222233444 445557777766654
Q ss_pred ---CCceEEEEeCCCC
Q 022194 138 ---PWTKLVWVESPTN 150 (301)
Q Consensus 138 ---~~~~~v~i~~~~n 150 (301)
.++.+++-+....
T Consensus 89 ~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 89 EQFGGIDICVNNASAI 104 (285)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 3667766554433
No 450
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=39.24 E-value=1.1e+02 Score=25.10 Aligned_cols=96 Identities=17% Similarity=0.166 Sum_probs=50.5
Q ss_pred EEecchHHHH--HHHHhccCC---C---CeEEEcC-CCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEE
Q 022194 74 LCFTSGMAAL--AAVTHLLGT---G---EEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVW 144 (301)
Q Consensus 74 i~~~sG~~ai--~~~~~~~~~---g---~~Vlv~~-~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~ 144 (301)
+++++|+..+ .++..+++. | .+|++.+ .........+.......++.+...+..|.+.+++++ ..+.+|+
T Consensus 3 vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vi 81 (337)
T 1r6d_A 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-RGVDAIV 81 (337)
T ss_dssp EEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-TTCCEEE
T ss_pred EEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-cCCCEEE
Confidence 5666666444 355556554 6 6666533 221111101111112245677777878999998888 4566666
Q ss_pred EeCCCCCccc----c--------ccHHHHHHHHHHcCC
Q 022194 145 VESPTNPRQQ----I--------CDIRKIAEMAHAHGA 170 (301)
Q Consensus 145 i~~~~np~G~----~--------~~l~~l~~l~~~~~~ 170 (301)
-+........ . .-...+++.|++.++
T Consensus 82 h~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~ 119 (337)
T 1r6d_A 82 HFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV 119 (337)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5433221110 0 113567888888875
No 451
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=39.24 E-value=94 Score=24.52 Aligned_cols=72 Identities=19% Similarity=0.262 Sum_probs=41.2
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| .....+++.|.+|++.+-.-... +...+.. .+.....+..|.+++++.++ ..+.
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNI----ARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 467777777666 35666788888888765432222 1222222 34555556667777766554 3566
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 85 ~lv~nA 90 (255)
T 4eso_A 85 LLHINA 90 (255)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 452
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=39.21 E-value=47 Score=26.97 Aligned_cols=77 Identities=16% Similarity=0.196 Sum_probs=42.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhc------ccCCcEEEEecCCCHHHHHhhcCC-----
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT------PKTGVVVKRVNTCDLDEVASAIGP----- 138 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~------~~~g~~~~~~~~~d~~~l~~~l~~----- 138 (301)
..+++|+|+..+ ..+..+++.|.+|++..-.-.........+. ....+.+...+..|.+.+++.++.
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 467777777665 3566677888888765432111111111111 122345555666688777766652
Q ss_pred -CceEEEEeCC
Q 022194 139 -WTKLVWVESP 148 (301)
Q Consensus 139 -~~~~v~i~~~ 148 (301)
++.+|+-+..
T Consensus 99 g~id~li~~Ag 109 (303)
T 1yxm_A 99 GKINFLVNNGG 109 (303)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 5677665543
No 453
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=39.21 E-value=55 Score=25.63 Aligned_cols=76 Identities=7% Similarity=0.065 Sum_probs=41.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCC-CccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL-YGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~-y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++++|+..+ ..+..+++.|.+|++..-. -....... ..++..+ +.+...+..|.+.+++.++ ..+
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI-ASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI 86 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH-HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH-HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457778777555 4566677788887765432 22222111 1112223 4445555668777776665 256
Q ss_pred eEEEEeCC
Q 022194 141 KLVWVESP 148 (301)
Q Consensus 141 ~~v~i~~~ 148 (301)
.+|+-+..
T Consensus 87 d~vi~~Ag 94 (258)
T 3afn_B 87 DVLINNAG 94 (258)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 77665533
No 454
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=39.11 E-value=41 Score=26.33 Aligned_cols=75 Identities=17% Similarity=0.110 Sum_probs=41.4
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccC--CcEEEEecCCCHHHHHhhcC------CCceE
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTKL 142 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~--g~~~~~~~~~d~~~l~~~l~------~~~~~ 142 (301)
.+++++|+..+ ..+..+++.|.+|++..-.-...........+.. .+.+...+..|.+.+++.++ .++.+
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDV 83 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 56777777555 4566677788887765432211111111111222 24555566668877776664 25677
Q ss_pred EEEeC
Q 022194 143 VWVES 147 (301)
Q Consensus 143 v~i~~ 147 (301)
|+-+.
T Consensus 84 li~~A 88 (250)
T 2cfc_A 84 LVNNA 88 (250)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66553
No 455
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=39.10 E-value=17 Score=24.54 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCEEEEeCCc
Q 022194 158 IRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~ 178 (301)
-.+|.++|+++|++++.|...
T Consensus 44 A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCeEEECHHH
Confidence 577999999999999999863
No 456
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=39.04 E-value=43 Score=26.81 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=47.3
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCC-CceEEEEeCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPT 149 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~~~ 149 (301)
-+++++|+.-+ .++..+++.|.+|.+..- ...+..|.+.+++.+.. ++.+|+-....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r--------------------~~~D~~d~~~~~~~~~~~~~d~vi~~a~~ 66 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK--------------------KLLDITNISQVQQVVQEIRPHIIIHCAAY 66 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECT--------------------TTSCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecc--------------------cccCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 36666666444 466677777877776543 01344578888877764 56666654332
Q ss_pred CCcccc-c-----------cHHHHHHHHHHcCCEEE
Q 022194 150 NPRQQI-C-----------DIRKIAEMAHAHGALLL 173 (301)
Q Consensus 150 np~G~~-~-----------~l~~l~~l~~~~~~~li 173 (301)
...... . -...+++.|++.++.+|
T Consensus 67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v 102 (287)
T 3sc6_A 67 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLV 102 (287)
T ss_dssp CCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred cChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 221111 1 13558888888886544
No 457
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=39.01 E-value=17 Score=32.25 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=25.6
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
...|...+++++++.||++|+-||+|-++
T Consensus 91 p~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 91 PILGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp GGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 33577889999999999999999999985
No 458
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=38.99 E-value=86 Score=24.54 Aligned_cols=75 Identities=16% Similarity=0.165 Sum_probs=42.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++++|+..+ ..+..+++.|.+|++.+..-....... ..++. ..+.+...+..|.+.+++.++ ..+.
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 92 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVD 92 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777877665 356667788888876543221111111 11121 235556666668887777664 3567
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+|+-+.
T Consensus 93 ~vi~~A 98 (260)
T 3awd_A 93 ILVACA 98 (260)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766553
No 459
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=38.99 E-value=16 Score=34.36 Aligned_cols=29 Identities=17% Similarity=0.375 Sum_probs=24.2
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCCcC
Q 022194 151 PRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (301)
Q Consensus 151 p~G~~~~l~~l~~l~~~~~~~li~D~~~~ 179 (301)
|++...+++++++.||++|+-||.|-++-
T Consensus 250 ~~~~~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 250 PEKRIAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp TTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccchHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 33345789999999999999999999863
No 460
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=38.86 E-value=1e+02 Score=25.18 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=36.0
Q ss_pred CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHH---HHhhcC-CCceEEEEeCCCCCccccccHHHHHH
Q 022194 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDE---VASAIG-PWTKLVWVESPTNPRQQICDIRKIAE 163 (301)
Q Consensus 92 ~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~---l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~ 163 (301)
++..+++..+.|. .+++.+|++...+... ++.+ +.+.++ .++++|+.+.-.++ +-.-.
T Consensus 189 ~~~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWA-------YFARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFST-------KSSEA 254 (291)
T ss_dssp SCCEEEESSCCCH-------HHHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCC-------HHHHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHHH
Confidence 4677888777654 4456777776554321 3333 333333 45666666544443 12223
Q ss_pred HHHHcCCEEE
Q 022194 164 MAHAHGALLL 173 (301)
Q Consensus 164 l~~~~~~~li 173 (301)
++++.|+.++
T Consensus 255 ia~~~g~~v~ 264 (291)
T 1pq4_A 255 IAAEIGAGVE 264 (291)
T ss_dssp HHHHHTCEEE
T ss_pred HHHHcCCeEE
Confidence 4566665543
No 461
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=38.63 E-value=38 Score=26.49 Aligned_cols=74 Identities=18% Similarity=0.159 Sum_probs=41.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEc-CCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~ 140 (301)
..+++++|+..+ ..+..+++.|.+|++. ...-....... ..++..+ +.+...+..|.+.+++.++ ..+
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 84 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-EEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRI 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-HHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 357778777665 4566677888888765 32222221111 1122223 4555566668777776664 256
Q ss_pred eEEEEe
Q 022194 141 KLVWVE 146 (301)
Q Consensus 141 ~~v~i~ 146 (301)
.+|+-+
T Consensus 85 d~vi~~ 90 (247)
T 2hq1_A 85 DILVNN 90 (247)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 666654
No 462
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=38.53 E-value=74 Score=25.36 Aligned_cols=76 Identities=18% Similarity=0.202 Sum_probs=41.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-.........+.+..+ +.+...+..|.+++++.++ ..+.
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 101 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 101 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467778887665 35666788888887654321111111111101113 3444556667777766654 3566
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 102 ~lvnnA 107 (267)
T 1vl8_A 102 TVVNAA 107 (267)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 463
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=38.41 E-value=1.1e+02 Score=26.03 Aligned_cols=108 Identities=14% Similarity=0.126 Sum_probs=62.2
Q ss_pred HHHHhhcCCCceEEe--cchH---HHHHHHHhccCC-CCeEEEcCCCCccHHHHHhhhcccC-CcEEEEecCCCHHHHHh
Q 022194 62 SLLAKLDKADRALCF--TSGM---AALAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVAS 134 (301)
Q Consensus 62 ~~l~~~~~~~~~i~~--~sG~---~ai~~~~~~~~~-g~~Vlv~~~~y~~~~~~~~~~~~~~-g~~~~~~~~~d~~~l~~ 134 (301)
+.+.+.+|.+-.+.+ ++|. +++..+..+-+. -+-..+.+|.-......+..+.+.. ++.+..-...+.+++++
T Consensus 181 ~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~ 260 (389)
T 2oz8_A 181 ELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRL 260 (389)
T ss_dssp HHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHH
T ss_pred HHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHH
Confidence 444555555433333 3332 444433333221 2333666775433333444444444 55555444336777777
Q ss_pred hcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 022194 135 AIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 135 ~l~~-~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D 175 (301)
.+.. ...+|.+. |.+.+..+++++|+++|+.+++=
T Consensus 261 ~i~~~~~d~v~ik------GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 261 LLEAHAADILNVH------GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp HHHTTCCSEEEEC------SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHcCCCCEEEEC------cCHHHHHHHHHHHHHcCCeEeec
Confidence 7754 46677665 88999999999999999877766
No 464
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=38.35 E-value=35 Score=27.71 Aligned_cols=71 Identities=14% Similarity=0.145 Sum_probs=42.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcCC--CceEEEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIGP--WTKLVWV 145 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~~--~~~~v~i 145 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-... +...+..+ +.+...+..|.+.+++.++. ++.+++-
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG----EAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 467778887665 46667788888887754332211 23333333 44445555588888777653 5566554
Q ss_pred e
Q 022194 146 E 146 (301)
Q Consensus 146 ~ 146 (301)
+
T Consensus 93 n 93 (291)
T 3rd5_A 93 N 93 (291)
T ss_dssp C
T ss_pred C
Confidence 4
No 465
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=38.33 E-value=16 Score=32.55 Aligned_cols=29 Identities=10% Similarity=0.137 Sum_probs=25.6
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 150 np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
...|...+++++++.||++|+-||+|-++
T Consensus 97 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 97 PMLGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp GGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 33577889999999999999999999985
No 466
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=38.19 E-value=1.2e+02 Score=25.79 Aligned_cols=112 Identities=9% Similarity=-0.001 Sum_probs=63.9
Q ss_pred HHHHHhhcCCCceEEe--cchH---HHHHHHHhccCCC-CeEEEcCCCCccHHHHHhhhcccCCcEEEEecC-CCHHHHH
Q 022194 61 ESLLAKLDKADRALCF--TSGM---AALAAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVA 133 (301)
Q Consensus 61 ~~~l~~~~~~~~~i~~--~sG~---~ai~~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~ 133 (301)
-+.+.+.+|.+-.+.+ ++|. +++..+. .+.+- +-..+..|.-......+..+.+..++.+..-.. .+.++++
T Consensus 174 v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~-~l~~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 252 (382)
T 2gdq_A 174 INALQHTAGSSITMILDANQSYDAAAAFKWER-YFSEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYV 252 (382)
T ss_dssp HHHHHHHHCTTSEEEEECTTCCCHHHHHTTHH-HHTTCSCEEEEECCSCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHH
T ss_pred HHHHHHhhCCCCEEEEECCCCCCHHHHHHHHH-HHhhccCCeEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHH
Confidence 3445555665533333 2332 3333333 24443 455677775443344444555555555444332 2677777
Q ss_pred hhcCCC-ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 022194 134 SAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (301)
Q Consensus 134 ~~l~~~-~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D 175 (301)
+.+... ..+|.+. -+..|.+.+..+++++|+++|+.+++=
T Consensus 253 ~~i~~~~~d~v~ik--~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 253 PLLSQRCLDIIQPD--VMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp HHHHTTCCSEECCC--TTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred HHHHcCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 777643 4444332 345788999999999999999987766
No 467
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=38.07 E-value=36 Score=26.50 Aligned_cols=93 Identities=18% Similarity=0.107 Sum_probs=49.1
Q ss_pred ceEEecchHHHH--HHHHhccCCCC--eEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcCCCceEEEEeC
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGE--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~--~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~v~i~~ 147 (301)
..+++++|+..+ ..+..+++.|. +|++..-.-.... . ....++.+...+..|.+.+++.++ .+.+|+-+.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~----~-~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~a 92 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD----E-EAYKNVNQEVVDFEKLDDYASAFQ-GHDVGFCCL 92 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC----S-GGGGGCEEEECCGGGGGGGGGGGS-SCSEEEECC
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc----c-cccCCceEEecCcCCHHHHHHHhc-CCCEEEECC
Confidence 356777776555 35566777777 7765432111110 1 011245666666667788888776 566666543
Q ss_pred CCCCccc---------cccHHHHHHHHHHcCC
Q 022194 148 PTNPRQQ---------ICDIRKIAEMAHAHGA 170 (301)
Q Consensus 148 ~~np~G~---------~~~l~~l~~l~~~~~~ 170 (301)
....... +.-...+++.+++.+.
T Consensus 93 g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 124 (242)
T 2bka_A 93 GTTRGKAGAEGFVRVDRDYVLKSAELAKAGGC 124 (242)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcccccCCcccceeeeHHHHHHHHHHHHHCCC
Confidence 3221110 0113456677777653
No 468
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=37.89 E-value=16 Score=32.44 Aligned_cols=30 Identities=20% Similarity=0.321 Sum_probs=26.0
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 149 ~np~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
+...|...+++++++.||++|+-||+|-++
T Consensus 91 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 91 NSNFGTADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 334577888999999999999999999995
No 469
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=37.81 E-value=65 Score=25.03 Aligned_cols=77 Identities=8% Similarity=0.062 Sum_probs=42.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc--cCCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~--~~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++++|+..+ ..+..+++.|.+|++..-.-.........+.. ...+.+...+..|.+.+++.++ ..+.
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 87 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID 87 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 467788877665 35666777888887654321111111111111 1234555666668887777664 3567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+|+-+..
T Consensus 88 ~vi~~Ag 94 (248)
T 2pnf_A 88 ILVNNAG 94 (248)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7765543
No 470
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=37.76 E-value=1.2e+02 Score=26.00 Aligned_cols=98 Identities=10% Similarity=0.013 Sum_probs=52.3
Q ss_pred eEEecchHHHH--HHHHhccCCC-CeEEEcCCCCccHHHHHhhh---cc--cCCcEEEEecCCCHHHHHhhcC-CCceEE
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRV---TP--KTGVVVKRVNTCDLDEVASAIG-PWTKLV 143 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g-~~Vlv~~~~y~~~~~~~~~~---~~--~~g~~~~~~~~~d~~~l~~~l~-~~~~~v 143 (301)
.+++|+|+..+ .++..+++.| ..|++.+-.-.........+ .. ..++.+...+..|.+.++..+. .++.+|
T Consensus 37 ~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 116 (399)
T 3nzo_A 37 RFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYDYV 116 (399)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCSEE
T ss_pred EEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCCEE
Confidence 56677766444 4666677778 57766554222221111111 11 1345555556668877776654 467777
Q ss_pred EEeCCCCCcccc-cc-------------HHHHHHHHHHcCC
Q 022194 144 WVESPTNPRQQI-CD-------------IRKIAEMAHAHGA 170 (301)
Q Consensus 144 ~i~~~~np~G~~-~~-------------l~~l~~l~~~~~~ 170 (301)
+-.......... .+ ...+++.|+++++
T Consensus 117 ih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv 157 (399)
T 3nzo_A 117 LNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGA 157 (399)
T ss_dssp EECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 655332211111 11 3458888988885
No 471
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=37.70 E-value=1.1e+02 Score=23.83 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=34.2
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEc-CCCCccHHHHHhhhcccCCcEEEE--ecCCCHHHHHhhc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGVVVKR--VNTCDLDEVASAI 136 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~y~~~~~~~~~~~~~~g~~~~~--~~~~d~~~l~~~l 136 (301)
..+++|+|+..| ..+..+++.|..|++. ...-....... ..++..+.++.. .+..|.+.+++.+
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV-YEIQSNGGSAFSIGANLESLHGVEALY 76 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHH-HHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHHHhcCCceEEEecCcCCHHHHHHHH
Confidence 467888887666 4666678888888763 33222222111 222233444444 4455666665544
No 472
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=37.70 E-value=48 Score=26.16 Aligned_cols=36 Identities=11% Similarity=-0.000 Sum_probs=28.6
Q ss_pred CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 138 PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 138 ~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
-.+.+|+.+-. |..|......++.++|++||+.++.
T Consensus 177 l~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 177 LVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp SCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 45666666543 6679999999999999999988764
No 473
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=37.64 E-value=44 Score=26.04 Aligned_cols=75 Identities=11% Similarity=0.084 Sum_probs=40.4
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEc-CCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~-~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
.+++++|+..+ ..+..+++.|.+|++. ...-.... .+...++..+ +.+...+..|.+++++.++ ..+.
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE-EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 56778877565 4666678888888763 32211111 1111112223 3444455567777776664 2567
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 82 ~li~~Ag 88 (244)
T 1edo_A 82 VVVNNAG 88 (244)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7765533
No 474
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=37.58 E-value=1.5e+02 Score=23.70 Aligned_cols=74 Identities=11% Similarity=0.034 Sum_probs=42.4
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEe--cCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~--~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-....... ..+...+.++..+ +..|.+.+++.++ ..+.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 87 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELT-DEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLD 87 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888887666 356678888988887654322222111 2233344445444 4447777666654 3566
Q ss_pred EEEEe
Q 022194 142 LVWVE 146 (301)
Q Consensus 142 ~v~i~ 146 (301)
+++-+
T Consensus 88 ~lvnn 92 (280)
T 3tox_A 88 TAFNN 92 (280)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66654
No 475
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=37.48 E-value=63 Score=26.12 Aligned_cols=21 Identities=29% Similarity=0.126 Sum_probs=13.5
Q ss_pred HHHHHHHHhhcCCCceEEecc
Q 022194 58 DALESLLAKLDKADRALCFTS 78 (301)
Q Consensus 58 ~~l~~~l~~~~~~~~~i~~~s 78 (301)
.+|+++|.+.||.++++++.+
T Consensus 10 ~~Le~~L~~~fgL~~~~Vvp~ 30 (267)
T 3kv1_A 10 VQLEQKLVEKFNLKRALISLD 30 (267)
T ss_dssp HHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHHhCCCEEEEeCC
Confidence 566666777777666666543
No 476
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=37.46 E-value=1.1e+02 Score=24.36 Aligned_cols=77 Identities=10% Similarity=0.120 Sum_probs=42.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcc---cCCcEEEEecCCCHHHHHhhcC--CCceEEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP---KTGVVVKRVNTCDLDEVASAIG--PWTKLVW 144 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~---~~g~~~~~~~~~d~~~l~~~l~--~~~~~v~ 144 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-.........+.. ...+.....+..|.+.+++.++ .++.+++
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv 90 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI 90 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 467888887666 35667788888888765432222211212111 1123344445557777766664 3566666
Q ss_pred EeCC
Q 022194 145 VESP 148 (301)
Q Consensus 145 i~~~ 148 (301)
-+..
T Consensus 91 ~nAg 94 (267)
T 3t4x_A 91 NNLG 94 (267)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 5433
No 477
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=37.39 E-value=1.2e+02 Score=24.25 Aligned_cols=76 Identities=11% Similarity=0.102 Sum_probs=41.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCcc-------HHHHHhhhcccCCcEE--EEecCCCHHHHHhhcC---
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-------TDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG--- 137 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~-------~~~~~~~~~~~~g~~~--~~~~~~d~~~l~~~l~--- 137 (301)
..+++|+|+..| ..+..+.+.|.+|++..-.-.. .... ....+..+.++ ..++..|.+.+++.++
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 85 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSA-AAAVNAAGGQGLALKCDIREEDQVRAAVAATV 85 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHH-HHHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHH-HHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 467788887666 3566678888888765432211 1111 11122223444 4445557777766654
Q ss_pred ---CCceEEEEeCC
Q 022194 138 ---PWTKLVWVESP 148 (301)
Q Consensus 138 ---~~~~~v~i~~~ 148 (301)
..+.+++-+..
T Consensus 86 ~~~g~iD~lvnnAG 99 (274)
T 3e03_A 86 DTFGGIDILVNNAS 99 (274)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 35666665543
No 478
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=37.33 E-value=19 Score=24.38 Aligned_cols=21 Identities=19% Similarity=0.264 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCEEEEeCCc
Q 022194 158 IRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 158 l~~l~~l~~~~~~~li~D~~~ 178 (301)
-.+|.++|+++|++++.|-..
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKL 49 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCeecCHHH
Confidence 577999999999999999863
No 479
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=37.28 E-value=1e+02 Score=24.38 Aligned_cols=69 Identities=6% Similarity=0.021 Sum_probs=43.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-. ......+.+...+..|.+.+++.++ .++.++
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 100 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK--------PSADPDIHTVAGDISKPETADRIVREGIERFGRIDSL 100 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC--------CCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh--------hcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 567888887666 356678888988876543221 1223356666677778877776664 367777
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 101 v~nAg 105 (260)
T 3un1_A 101 VNNAG 105 (260)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65543
No 480
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=37.17 E-value=35 Score=23.97 Aligned_cols=40 Identities=13% Similarity=0.092 Sum_probs=27.4
Q ss_pred HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 130 ~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
+.++++....++.|+++.. .. -+++.++|+++|+-++- ++
T Consensus 73 ~~v~e~~~~g~k~v~~~~G-----~~--~~e~~~~a~~~Girvv~-nC 112 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIFNPG-----TE--NEELEEILSENGIEPVI-GC 112 (122)
T ss_dssp GGHHHHHHHCCSEEEECTT-----CC--CHHHHHHHHHTTCEEEE-SC
T ss_pred HHHHHHHhcCCCEEEECCC-----CC--hHHHHHHHHHcCCeEEC-Cc
Confidence 4455555556777777532 22 27999999999999884 55
No 481
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=36.92 E-value=54 Score=25.84 Aligned_cols=74 Identities=12% Similarity=-0.029 Sum_probs=37.4
Q ss_pred EEEcCCCCccHHHHHhhhcccCCcEEEEecCC----CHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCE
Q 022194 96 IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 171 (301)
Q Consensus 96 Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~----d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~ 171 (301)
|+--..+.....+.+... +..+-++-.+... .++.+.+.+.-+.....+.+ ..++++..+-+++.|+-
T Consensus 85 VV~I~vs~~Dil~aL~~a-~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~-------~ee~~~~i~~l~~~G~~ 156 (225)
T 2pju_A 85 VILIKPSGYDVLQFLAKA-GKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYIT-------EEDARGQINELKANGTE 156 (225)
T ss_dssp EEEECCCHHHHHHHHHHT-TCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESS-------HHHHHHHHHHHHHTTCC
T ss_pred EEEecCCHHHHHHHHHHH-HhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCC-------HHHHHHHHHHHHHCCCC
Confidence 443344444444444333 3333344333322 45667777765544433221 23567777777788876
Q ss_pred EEEeCC
Q 022194 172 LLVDNS 177 (301)
Q Consensus 172 li~D~~ 177 (301)
+|+=+.
T Consensus 157 vVVG~~ 162 (225)
T 2pju_A 157 AVVGAG 162 (225)
T ss_dssp EEEESH
T ss_pred EEECCH
Confidence 655443
No 482
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=36.87 E-value=47 Score=26.37 Aligned_cols=56 Identities=9% Similarity=0.042 Sum_probs=30.4
Q ss_pred HhhhcccCCcEEEEecCC-CHH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 022194 110 LSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~-d~~----~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li 173 (301)
++..++..|..+...+.. +.+ .++.....++.+|++..... .+..+.+++.++++|
T Consensus 29 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--------~~~~~~l~~~~iPvV 89 (276)
T 3jy6_A 29 ISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--------PQTVQEILHQQMPVV 89 (276)
T ss_dssp HHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--------HHHHHHHHTTSSCEE
T ss_pred HHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--------HHHHHHHHHCCCCEE
Confidence 445566677777666654 322 23344446677776654332 345555566666443
No 483
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=36.73 E-value=74 Score=26.39 Aligned_cols=68 Identities=13% Similarity=0.201 Sum_probs=39.5
Q ss_pred CCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCC------C---HHHHHhhcC-CCceEEEEeCCCCCccccccHHHH
Q 022194 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------D---LDEVASAIG-PWTKLVWVESPTNPRQQICDIRKI 161 (301)
Q Consensus 92 ~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~------d---~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l 161 (301)
++..+++..+.|. .+++.+|++...+... + +.++.+.++ .++++|+.+.-.++ +-+
T Consensus 189 ~~~~~v~~H~af~-------Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFG-------YLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASS-------KVA 254 (312)
T ss_dssp SCCEEEESSCTTH-------HHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCH-------HHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 4677888766553 5567788877655321 3 344445555 46777776544432 334
Q ss_pred HHHHHHcCCEEE
Q 022194 162 AEMAHAHGALLL 173 (301)
Q Consensus 162 ~~l~~~~~~~li 173 (301)
-.++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 445777777654
No 484
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=36.71 E-value=1.2e+02 Score=22.16 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=45.8
Q ss_pred HHHHHHHHhhcCCCceEEecchHHHH---HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHh
Q 022194 58 DALESLLAKLDKADRALCFTSGMAAL---AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVAS 134 (301)
Q Consensus 58 ~~l~~~l~~~~~~~~~i~~~sG~~ai---~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~ 134 (301)
+++++....+...+.+++++.|.... .....+.+-|..+....+.+ ..
T Consensus 28 ~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~-----------------------------~~ 78 (180)
T 1jeo_A 28 NKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETT-----------------------------TP 78 (180)
T ss_dssp HHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTT-----------------------------CC
T ss_pred HHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCc-----------------------------cc
Confidence 34444444445667888898886332 23333434444444332110 01
Q ss_pred hcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCE--EEEeC
Q 022194 135 AIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGAL--LLVDN 176 (301)
Q Consensus 135 ~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~--li~D~ 176 (301)
.+.++..+|+++.. |...++-+.++.+++.|+. .|.|.
T Consensus 79 ~~~~~d~vi~iS~s----G~t~~~~~~~~~ak~~g~~vi~IT~~ 118 (180)
T 1jeo_A 79 SYEKDDLLILISGS----GRTESVLTVAKKAKNINNNIIAIVCE 118 (180)
T ss_dssp CCCTTCEEEEEESS----SCCHHHHHHHHHHHTTCSCEEEEESS
T ss_pred cCCCCCEEEEEeCC----CCcHHHHHHHHHHHHCCCcEEEEeCC
Confidence 23344455555533 4456778888999998854 44444
No 485
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=36.69 E-value=1.1e+02 Score=25.21 Aligned_cols=77 Identities=18% Similarity=0.309 Sum_probs=42.3
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCC-------Cc-cHHHHH---hhhcccCC--cEEEEecCCCHHHHHhhc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL-------YG-GTDRLL---SRVTPKTG--VVVKRVNTCDLDEVASAI 136 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~-------y~-~~~~~~---~~~~~~~g--~~~~~~~~~d~~~l~~~l 136 (301)
..+++|+|+..| ..+..+++.|.+|++.+-. +. .....+ ...+...+ +.+...+..|.+++++.+
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 126 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV 126 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 577888887666 3666788889888765322 10 001111 11222233 344455556777777666
Q ss_pred C------CCceEEEEeCC
Q 022194 137 G------PWTKLVWVESP 148 (301)
Q Consensus 137 ~------~~~~~v~i~~~ 148 (301)
+ ..+.+++-+..
T Consensus 127 ~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 127 DEALAEFGHIDILVSNVG 144 (317)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 4 36676665533
No 486
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=36.52 E-value=1.1e+02 Score=24.40 Aligned_cols=76 Identities=11% Similarity=0.052 Sum_probs=43.8
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhccc--CCcEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~--~g~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-....... ..++. ..+....++..|.+++++.++ ..+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIG-AAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALN 107 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888887666 356667888988876554322221111 11222 234556666668777776664 3566
Q ss_pred EEEEeCC
Q 022194 142 LVWVESP 148 (301)
Q Consensus 142 ~v~i~~~ 148 (301)
+++-+..
T Consensus 108 ~lvnnAg 114 (270)
T 3ftp_A 108 VLVNNAG 114 (270)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665433
No 487
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=36.50 E-value=1.7e+02 Score=24.46 Aligned_cols=76 Identities=12% Similarity=0.070 Sum_probs=42.7
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCcc-------HHHHHhhhcccCCcEEEE--ecCCCHHHHHhhcC---
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-------TDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG--- 137 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~-------~~~~~~~~~~~~g~~~~~--~~~~d~~~l~~~l~--- 137 (301)
..+++|+|+..| ..+..+++.|.+|++..-.-.. ..... ..++..+.++.. ++..|.+.+++.++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~-~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 124 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAA-EEIEAVGGKALPCIVDVRDEQQISAAVEKAI 124 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHH-HHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 567888887666 3566788888888765432221 11111 222333444444 45557777776664
Q ss_pred ---CCceEEEEeCC
Q 022194 138 ---PWTKLVWVESP 148 (301)
Q Consensus 138 ---~~~~~v~i~~~ 148 (301)
..+.+++-+..
T Consensus 125 ~~~g~iDilVnnAG 138 (346)
T 3kvo_A 125 KKFGGIDILVNNAS 138 (346)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 36676665533
No 488
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=36.49 E-value=90 Score=25.75 Aligned_cols=65 Identities=11% Similarity=-0.025 Sum_probs=38.1
Q ss_pred CCccHHHHHhhhcccCCcEEEEecCC-CHH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 022194 102 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (301)
Q Consensus 102 ~y~~~~~~~~~~~~~~g~~~~~~~~~-d~~----~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li 173 (301)
.|......++..++..|..+...+.. +.+ .++..+..++.+|++...... .+..+.+++.++++|
T Consensus 82 ~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~-------~~~~~~l~~~~iPvV 151 (344)
T 3kjx_A 82 VFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHS-------EAARAMLDAAGIPVV 151 (344)
T ss_dssp SHHHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCC-------HHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCC-------HHHHHHHHhCCCCEE
Confidence 33444445567788888888776654 333 344445567888877643321 245556667776543
No 489
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=36.40 E-value=1.1e+02 Score=26.61 Aligned_cols=78 Identities=15% Similarity=0.031 Sum_probs=47.8
Q ss_pred EEcCCCCccHHHHHhhhcccCC-cEEEEecC-CCHHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 97 VAGDDLYGGTDRLLSRVTPKTG-VVVKRVNT-CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 97 lv~~~~y~~~~~~~~~~~~~~g-~~~~~~~~-~d~~~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
.+.+|.-......+..+.+..+ +.+..... .+.+++++.+.....-++..-+ +-.|.+.+..+++++|+++|+.+++
T Consensus 259 ~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~-~~~GGitea~~ia~~A~~~gi~~~~ 337 (428)
T 3bjs_A 259 WLEEPFACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDL-SKCGGITEGIRIAAMASAYRIPINA 337 (428)
T ss_dssp CEECCSCTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBT-TTSSCHHHHHHHHHHHHHTTCCBCC
T ss_pred EEECCCCccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCc-cccCCHHHHHHHHHHHHHcCCeEEe
Confidence 4566644333344445555555 55444332 2678888888754333332223 4478899999999999999987655
Q ss_pred e
Q 022194 175 D 175 (301)
Q Consensus 175 D 175 (301)
=
T Consensus 338 ~ 338 (428)
T 3bjs_A 338 H 338 (428)
T ss_dssp B
T ss_pred c
Confidence 5
No 490
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=36.16 E-value=77 Score=25.04 Aligned_cols=75 Identities=13% Similarity=0.064 Sum_probs=40.5
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++++|+..+ ..+..+++.|.+|++..-.-......+...++..+ +.+...+..|.+.+++.++ ..+.
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 101 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD 101 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888887665 46666778888887643311111111111122223 4455566668777776664 2556
Q ss_pred EEEEe
Q 022194 142 LVWVE 146 (301)
Q Consensus 142 ~v~i~ 146 (301)
+++-+
T Consensus 102 ~vi~~ 106 (274)
T 1ja9_A 102 FVMSN 106 (274)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 66543
No 491
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=36.06 E-value=66 Score=25.87 Aligned_cols=80 Identities=6% Similarity=0.088 Sum_probs=47.9
Q ss_pred CeEEEcCCCCccHHHHHhhhcccCCcEEEE-ecCC-CHHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHH
Q 022194 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKR-VNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHA 167 (301)
Q Consensus 94 ~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~-~~~~-d~~~l~~~l~~~~~~v~i~~~~np~G~~~~----l~~l~~l~~~ 167 (301)
|.+++++..+.... .+...++..|++.+. +.+. +.+.++...+.....|++.+...-||...+ +.++.+-+|+
T Consensus 118 dG~IipDLP~eE~~-~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~ 196 (252)
T 3tha_A 118 CALIVPELSFEESD-DLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRS 196 (252)
T ss_dssp EEEECTTCCGGGCH-HHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHT
T ss_pred CEEEeCCCCHHHHH-HHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHH
Confidence 66777776554432 344667778877665 3333 467777666666667777665555776543 4555555555
Q ss_pred c-CCEEEE
Q 022194 168 H-GALLLV 174 (301)
Q Consensus 168 ~-~~~li~ 174 (301)
+ +.++++
T Consensus 197 ~~~~Pv~v 204 (252)
T 3tha_A 197 FTNLPIFV 204 (252)
T ss_dssp TCCSCEEE
T ss_pred hcCCcEEE
Confidence 4 455554
No 492
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=35.71 E-value=1e+02 Score=24.24 Aligned_cols=75 Identities=12% Similarity=0.093 Sum_probs=40.6
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC-------CCc
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG-------PWT 140 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~-------~~~ 140 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-......... ++..+ +.+...+..|.+++++.++ ..+
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 88 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQ-WRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 88 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777555 45666778888887654321111111111 11223 3444555667777766653 356
Q ss_pred eEEEEeC
Q 022194 141 KLVWVES 147 (301)
Q Consensus 141 ~~v~i~~ 147 (301)
.+++-+.
T Consensus 89 d~lv~~A 95 (260)
T 2ae2_A 89 NILVNNA 95 (260)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 493
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=35.66 E-value=1.4e+02 Score=23.38 Aligned_cols=73 Identities=12% Similarity=0.165 Sum_probs=40.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCC--cEEEEecCCCHHHHHhhcC------CCce
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g--~~~~~~~~~d~~~l~~~l~------~~~~ 141 (301)
..+++|+|+..| ..+..+++.|.+|++.+-.-. ......+ ...+ +.+...+..|.+++++.++ ..+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEI-ARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHH-HTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHH-HhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 457778877665 356667788888876543221 1111122 2223 3444455557777776665 2567
Q ss_pred EEEEeC
Q 022194 142 LVWVES 147 (301)
Q Consensus 142 ~v~i~~ 147 (301)
+++-+.
T Consensus 82 ~lv~~A 87 (255)
T 2q2v_A 82 ILVNNA 87 (255)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766543
No 494
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=35.51 E-value=40 Score=27.62 Aligned_cols=66 Identities=9% Similarity=0.127 Sum_probs=41.9
Q ss_pred ccHHHHHhhhcccCCcEEEEecCC-CHH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 104 GGTDRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~-d~~----~l~~~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
......++..++..|.++...... +.+ .++..+..++.+|++..... ....+..+.+++.|+++|.
T Consensus 19 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~giPvV~ 89 (330)
T 3uug_A 19 IDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDG-----TTLSDVLKQAGEQGIKVIA 89 (330)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSG-----GGGHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCc-----hhHHHHHHHHHHCCCCEEE
Confidence 333444567788889988877754 433 34555556788888764432 2345666777888987654
No 495
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=35.51 E-value=1.2e+02 Score=23.99 Aligned_cols=75 Identities=11% Similarity=0.159 Sum_probs=41.9
Q ss_pred ceEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCcEEEEecCCCHHHHHhhcC------CCceEE
Q 022194 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (301)
Q Consensus 72 ~~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~------~~~~~v 143 (301)
..+++|+|+..+ ..+..+++.|.+|++.+-.-......... +.. .+.+...+..|.+.+++.++ ..+.++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE-LAD-AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TGG-GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hhc-CceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457777777665 35666778888887653321111111111 111 24555667678887776665 256776
Q ss_pred EEeCC
Q 022194 144 WVESP 148 (301)
Q Consensus 144 ~i~~~ 148 (301)
+-+..
T Consensus 86 v~~Ag 90 (260)
T 1nff_A 86 VNNAG 90 (260)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65433
No 496
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=35.45 E-value=76 Score=25.41 Aligned_cols=75 Identities=11% Similarity=0.126 Sum_probs=48.4
Q ss_pred CCeEEEcCC---CCccHHHHHhhhcccCCcEEEEecCC-CHHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHH
Q 022194 93 GEEIVAGDD---LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (301)
Q Consensus 93 g~~Vlv~~~---~y~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~l~-~~~~~v~i~~~~np~G~~~~l~~l~~l~~~ 167 (301)
+.+|++..+ .|.--...+...++..|.+++.+..+ +.+++.+.+. .++.+|.++....+ ....++++++..++
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~--~~~~~~~~i~~l~~ 200 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTT--TMYAFKEVNDMLLE 200 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTT--TTTHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccC--CHHHHHHHHHHHHh
Confidence 345654443 33333444567788999999877643 5666655554 57888888765443 35568888888877
Q ss_pred cC
Q 022194 168 HG 169 (301)
Q Consensus 168 ~~ 169 (301)
.+
T Consensus 201 ~~ 202 (258)
T 2i2x_B 201 NG 202 (258)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 497
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=35.43 E-value=1.1e+02 Score=26.27 Aligned_cols=111 Identities=12% Similarity=0.044 Sum_probs=59.9
Q ss_pred HHHHhhcCCCceEEe--cchH---HHHHHHHhccCCCCeEEEcCCCCccH-HHHHhhhcccCCcEEEEecC-CCHHHHHh
Q 022194 62 SLLAKLDKADRALCF--TSGM---AALAAVTHLLGTGEEIVAGDDLYGGT-DRLLSRVTPKTGVVVKRVNT-CDLDEVAS 134 (301)
Q Consensus 62 ~~l~~~~~~~~~i~~--~sG~---~ai~~~~~~~~~g~~Vlv~~~~y~~~-~~~~~~~~~~~g~~~~~~~~-~d~~~l~~ 134 (301)
+.+.+.+|.+-.+.+ ++|. +|+..+.. +.+-+-.++..|..... ...+..+.+..++.+..-.. .+..++++
T Consensus 190 ~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~-L~~~~i~~iEeP~~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 268 (392)
T 3ddm_A 190 LHVRELLGAATPLMADANQGWDLPRARQMAQR-LGPAQLDWLEEPLRADRPAAEWAELAQAAPMPLAGGENIAGVAAFET 268 (392)
T ss_dssp HHHHHHHCSSSCEEEECTTCCCHHHHHHHHHH-HGGGCCSEEECCSCTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHH
T ss_pred HHHHHhcCCCceEEEeCCCCCCHHHHHHHHHH-HHHhCCCEEECCCCccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHH
Confidence 445556665533333 3332 33333332 33323345666655443 33444444445555443332 26777777
Q ss_pred hcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 022194 135 AIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (301)
Q Consensus 135 ~l~~~~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~ 174 (301)
.+.....-++ .---...|.+.+..+++++|+++|+.+..
T Consensus 269 ~i~~~a~d~v-~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 307 (392)
T 3ddm_A 269 ALAARSLRVM-QPDLAKWGGFSGCLPVARAVVAAGLRYCP 307 (392)
T ss_dssp HHHHTCEEEE-CCCTTTTTHHHHHHHHHHHHHHTTCEECC
T ss_pred HHHcCCCCEE-EeCcchhCCHHHHHHHHHHHHHcCCEEEe
Confidence 7653322222 22234478899999999999999998753
No 498
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=35.33 E-value=1.4e+02 Score=25.46 Aligned_cols=48 Identities=17% Similarity=0.246 Sum_probs=31.4
Q ss_pred CHHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCC
Q 022194 128 DLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (301)
Q Consensus 128 d~~~l~~~l~~~-~~~v~i~~~~np~G~~~~l~~l~~l~~~~~~~li~D~~ 177 (301)
+..++++.+... ..+|.+. +. -.|.+.+..+++++|+++|+.+.+-..
T Consensus 250 ~~~~~~~~i~~~a~d~v~~k-~~-~~GGi~~~~~ia~~A~~~gi~~~~~~~ 298 (379)
T 3r0u_A 250 DAKDAERVIDEQACNMINIK-LA-KTGGILEAQKIKKLADSAGISCMVGCM 298 (379)
T ss_dssp SHHHHHHHHHTTCCSEEEEC-HH-HHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CHHHHHHHHHcCCCCEEEEC-cc-ccCCHHHHHHHHHHHHHcCCEEEEeCC
Confidence 455555555433 3333322 22 267778889999999999999887654
No 499
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=35.25 E-value=79 Score=24.37 Aligned_cols=90 Identities=14% Similarity=0.089 Sum_probs=48.4
Q ss_pred eEEecchHHHH--HHHHhccCCCCeEEEcCCCCccHHHHHhhhcccCCc-EEEEecCCCHHHHHhhcCCCceEEEEeCCC
Q 022194 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV-VVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (301)
Q Consensus 73 ~i~~~sG~~ai--~~~~~~~~~g~~Vlv~~~~y~~~~~~~~~~~~~~g~-~~~~~~~~d~~~l~~~l~~~~~~v~i~~~~ 149 (301)
.+++++|+..+ .++..+++.|.+|++..-.-.... . ....++ .+...+.. +.+.+.+. .+.+|+.+...
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~----~-~~~~~~~~~~~~Dl~--~~~~~~~~-~~D~vi~~ag~ 94 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP----E-LRERGASDIVVANLE--EDFSHAFA-SIDAVVFAAGS 94 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH----H-HHHTTCSEEEECCTT--SCCGGGGT-TCSEEEECCCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHH----H-HHhCCCceEEEcccH--HHHHHHHc-CCCEEEECCCC
Confidence 46677776444 466667778888775543222221 1 122356 77666655 55666665 56666654332
Q ss_pred CCcccc--------ccHHHHHHHHHHcCC
Q 022194 150 NPRQQI--------CDIRKIAEMAHAHGA 170 (301)
Q Consensus 150 np~G~~--------~~l~~l~~l~~~~~~ 170 (301)
...... .-...+++.|++.++
T Consensus 95 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 123 (236)
T 3e8x_A 95 GPHTGADKTILIDLWGAIKTIQEAEKRGI 123 (236)
T ss_dssp CTTSCHHHHHHTTTHHHHHHHHHHHHHTC
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHcCC
Confidence 221111 113457777777653
No 500
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=35.22 E-value=20 Score=32.64 Aligned_cols=27 Identities=15% Similarity=0.201 Sum_probs=24.5
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCCc
Q 022194 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (301)
Q Consensus 152 ~G~~~~l~~l~~l~~~~~~~li~D~~~ 178 (301)
.|+..+++++++.||++|+-||+|-+.
T Consensus 89 ~Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 89 YGTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 477778999999999999999999995
Done!