BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022196
(301 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic
OS=Arabidopsis thaliana GN=PAP13 PE=1 SV=2
Length = 299
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/301 (66%), Positives = 233/301 (77%), Gaps = 2/301 (0%)
Query: 1 MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAP 60
MA + S+P SA+ F S+S + + RRR+ +AMVQ+ VQG+P
Sbjct: 1 MALIHGSVPGTSAVRLVFSTSASPSRFCLNVPVVKQGWKNSCRRRV-LRAMVQETVQGSP 59
Query: 61 AAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTT 120
YA+EMERLSAKESLLLA KDAGGFEALV GKTTNMQ+IDVNERIT LERLNPTPRPTT
Sbjct: 60 LVYAREMERLSAKESLLLALKDAGGFEALVTGKTTNMQRIDVNERITSLERLNPTPRPTT 119
Query: 121 SPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNS 180
SP EGRWNFEWFGSGSPG AR IFERFP TLANLS M+++IKD A TAN KLLNS
Sbjct: 120 SPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNS 179
Query: 181 IESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPI 240
IESK S+KL VEGPLRLKEEY+EG+LE+PTVIEE +PEQLK A QA TT+QQLPA I
Sbjct: 180 IESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALI 239
Query: 241 RDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPSSPIEEPITEYE 300
+D ++ GLRIPLSG+F+R FMISYLDEEILI+RD G+PEVLTR++ PSS + E I EY+
Sbjct: 240 KDTLASGLRIPLSGSFERFFMISYLDEEILIVRDTEGVPEVLTRIETPSSTVVETI-EYD 298
Query: 301 S 301
S
Sbjct: 299 S 299
>sp|Q9M2P7|PAP9_ARATH Probable plastid-lipid-associated protein 9, chloroplastic
OS=Arabidopsis thaliana GN=PAP9 PE=1 SV=1
Length = 308
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 169/243 (69%), Positives = 205/243 (84%)
Query: 44 RRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVN 103
RR+ C+AMVQ +VQG P+ YA+EMERLSAKESL+LAF DAGGFEALV GK T+MQ+IDVN
Sbjct: 48 RRMICRAMVQDSVQGIPSVYAREMERLSAKESLILAFNDAGGFEALVTGKITDMQKIDVN 107
Query: 104 ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVV 163
ERIT LERLNPTPRPTTSP+LEGRW+FEWFG +PG R +FERFP TL +LSNM++
Sbjct: 108 ERITNLERLNPTPRPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTLVSLSNMEIF 167
Query: 164 IKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLK 223
IKD TAN KLLNSIE+K + S+KL +EGPLR+KEEY+EG+LESPTVIEE +P+QL+
Sbjct: 168 IKDNNTKATANIKLLNSIENKITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLR 227
Query: 224 GAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLT 283
G QA TT+QQLP PI+D ++ GLRIPL GT+QR FMISYLD+EILI+RD +G+PEVLT
Sbjct: 228 GLLGQATTTLQQLPEPIKDTLANGLRIPLGGTYQRFFMISYLDDEILIVRDTAGVPEVLT 287
Query: 284 RLD 286
R++
Sbjct: 288 RVE 290
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 35/200 (17%)
Query: 101 DVNERITGLERLNPTPRPTTSP-FLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
+V E + LE LNPTP P +P L+G W + A F P LA S
Sbjct: 177 EVLELVNQLEALNPTPAPLENPELLDGNWVL---------LYTA---FSELIPLLAAGST 224
Query: 160 MDVVIK------DGKANITANFKLLNSIESKFSFS--TKLLVEGPLRLKEEYIEGILESP 211
+ +K D I N L+S + FSFS V P R++ + EG L+ P
Sbjct: 225 PLLKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPP 284
Query: 212 TVIEET-IPEQLKGAFNQAVTT---------VQQLPAPIRDAISGG--LRIPLSGTFQRL 259
+ +PE + G F Q ++ +Q + A I A+SG L++P G
Sbjct: 285 VIKSSVDLPESV-GVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSS 343
Query: 260 FMI-SYLDEEILIIRDASGI 278
+++ +YLD+++ I R G+
Sbjct: 344 WLLTTYLDKDLRISRGDGGL 363
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 43/213 (20%)
Query: 93 KTTNMQQIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFP 151
+ ++ + +V E IT LE NPTP PT + L G+W +A F +
Sbjct: 111 RASSETRAEVVELITQLEARNPTPAPTEALTLLNGKW------------ILAYTSFSQLF 158
Query: 152 PTL--ANLSNMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEE 202
P L +L + V + + + NF + N I+ + S + K V P R++ +
Sbjct: 159 PLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIK 218
Query: 203 YIEGILESPTVIEETI-PEQ------------LKGAFNQAVTTVQQLPAPIRDAISGG-- 247
+ EGI+ +P + + + PE+ LKG F ++++ + + ISG
Sbjct: 219 FDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIF----SSIENAASSVARTISGQPP 274
Query: 248 LRIPL-SGTFQRLFMISYLDEEILIIR-DASGI 278
L+IP+ + + + +YLD+E+ I R D S I
Sbjct: 275 LKIPIRTDNAESWLLTTYLDDELRISRGDGSSI 307
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 95 TNMQQIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPT 153
T+ + ++ E IT LE NPTP PT + L +W + + G F + R
Sbjct: 117 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY--TSFSGLFP---LLSRGTLP 171
Query: 154 LANLSNMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEEYIEG 206
LA + + I + NF + NSI+ + S + K V P R++ ++ EG
Sbjct: 172 LARVEEISQTID------SENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEG 225
Query: 207 ILESPTVIEE-TIPEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLSGT 255
++ +P V + +PE ++ F +++VQ + + IS L+ +S +
Sbjct: 226 VIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNS 285
Query: 256 -FQRLFMISYLDEEILIIRDASG 277
Q + +YLDE++ I R +G
Sbjct: 286 NAQSWLLTTYLDEDLRISRADAG 308
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Query: 101 DVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
++ E IT LE NPTP PT + L G+W +A F P L+
Sbjct: 123 EIVELITQLESKNPTPAPTEALTLLNGKW------------ILAYTTFAGLFPLLSRNLP 170
Query: 160 MDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEEYIEGILESPT 212
+ V + + + N + NS++ + + + K V PLR+ ++ EG++ +P
Sbjct: 171 LVKVEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQ 230
Query: 213 VIEE-TIPEQLK--------GAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRL---F 260
+ + IP+ + FN ++++Q + + IS I S + R+
Sbjct: 231 LTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWL 290
Query: 261 MISYLDEEILIIRDASGIPEVLTR 284
+ +YLDE++ I R G VL +
Sbjct: 291 LTTYLDEDLRISRGDGGSVFVLLK 314
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 33/209 (15%)
Query: 101 DVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
++ E IT LE NP P PT + L G+W +A F P L+ +
Sbjct: 126 EIVELITQLESKNPNPAPTEALTLLNGKW------------ILAYTSFSGLFPLLSRGNL 173
Query: 160 MDVVIKDGKANITA-NFKLLNSI-------ESKFSFSTKLLVEGPLRLKEEYIEGILESP 211
V +++ I + +F + NS+ + S + K V P R++ ++ EGI+ +P
Sbjct: 174 PLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 233
Query: 212 TVIEETI-PEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLS-GTFQRL 259
+ + + PE ++ F +T+VQ + + +IS ++ P++ Q
Sbjct: 234 QLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSW 293
Query: 260 FMISYLDEEILIIRDASGIPEVLTRLDPP 288
+ +YLD+E+ I R +G VL + P
Sbjct: 294 LLTTYLDDELRISRGDAGSVFVLIKEGSP 322
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 101 DVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
+++E IT LE NPTP P + F L G+W + FV F + R L +
Sbjct: 118 EISELITQLESKNPTPAPNEALFLLNGKWILAYTS------FVGLFPLLSRRIEPLVKVD 171
Query: 159 NMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEEYIEGILESP 211
+ I + +F + NS+ + FS + K + P R++ ++ +G++ +P
Sbjct: 172 EISQTID------SDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTP 225
Query: 212 TVIEET-IPEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPL-SGTFQRL 259
+ + IPE ++ +T+VQ + + IS L+ L S Q
Sbjct: 226 QLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSW 285
Query: 260 FMISYLDEEILIIRDASGIPEVLTR 284
+ +YLD+++ I R G VL +
Sbjct: 286 LLTTYLDKDLRISRGDGGSVYVLIK 310
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 112/270 (41%), Gaps = 40/270 (14%)
Query: 43 RRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDA--GGFEALVAGKTTNMQQI 100
RR + +A + A A + +E + E L + D+ G L A T +
Sbjct: 53 RRVFKVRATDTGEIGSALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSET---RA 109
Query: 101 DVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
++ + IT LE NPTP PT + F L G+W + FV F + R L +
Sbjct: 110 EIGDLITQLESKNPTPAPTEALFLLNGKWILAYTS------FVNLFPLLSRGIVPLIKVD 163
Query: 159 NMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEEYIEGILESP 211
+ I + NF + NS+ + S + K + P R++ ++ +G++ +P
Sbjct: 164 EISQTID------SDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTP 217
Query: 212 TVIEET-IPEQLKGAFNQAV---------TTVQQLPAPIRDAISGG--LRIPL-SGTFQR 258
+ + IPE ++ Q + T+VQ + + IS L+ L + Q
Sbjct: 218 QLTDSIEIPEYVE-VLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQS 276
Query: 259 LFMISYLDEEILIIRDASGIPEVLTRLDPP 288
+ +YLD++I I R G VL + P
Sbjct: 277 WLLTTYLDKDIRISRGDGGSVFVLIKEGSP 306
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 101 DVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
++ + IT LE NPTP PT + F L G+W + FV F + R L +
Sbjct: 119 EIGDLITQLESKNPTPAPTDALFLLNGKWILAYTS------FVGLFPLLSRGIVPLVKVD 172
Query: 159 NMDVVIKDGKANITANFKLLNSI-------ESKFSFSTKLLVEGPLRLKEEYIEGILESP 211
+ I + NF + NS+ + S + K + P R++ ++ EG++ +P
Sbjct: 173 EISQTID------SDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTP 226
Query: 212 TVIEET-IPEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLSG-TFQRL 259
+ + IPE ++ +T+VQ + IS L+ L G + Q
Sbjct: 227 QLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSW 286
Query: 260 FMISYLDEEILIIRDASGIPEVLTRLDPP 288
+ +YLD++I I R G VL + P
Sbjct: 287 LLTTYLDKDIRISRGDGGSVFVLIKEGSP 315
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 33/209 (15%)
Query: 101 DVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
++ E IT LE NP P PT + L G+W +A F P L+ +
Sbjct: 126 EIVELITQLESKNPNPAPTEALTLLNGKW------------ILAYTSFSGLFPLLSRGNL 173
Query: 160 MDVVIKDGKANITA-NFKLLNSI-------ESKFSFSTKLLVEGPLRLKEEYIEGILESP 211
V +++ I + +F + NS+ + S + K V P R++ ++ EGI+ +P
Sbjct: 174 PLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 233
Query: 212 TVIEETI-PEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLS-GTFQRL 259
+ + + PE ++ F +T+VQ + + +IS ++ P++ Q
Sbjct: 234 QLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSW 293
Query: 260 FMISYLDEEILIIRDASGIPEVLTRLDPP 288
+ +YLD+E+ I R +G VL + P
Sbjct: 294 LLTTYLDDELRIPRGDAGSVFVLIKEGSP 322
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 101 DVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
+++E IT LE NP P P + F L G+W + FV F + R L +
Sbjct: 127 EISELITQLESKNPNPAPNEALFLLNGKWILVYTS------FVGLFPLLSRRISPLVKVD 180
Query: 159 NMDVVIKDGKANITANFKLLNSI-ESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEET 217
+ I + + + + + + S + K V P R++ ++ +G++ +P + +
Sbjct: 181 EISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDSI 240
Query: 218 -IPEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLSG-TFQRLFMISYL 265
IPE ++ +T+VQ + + IS L+ L G + Q + +YL
Sbjct: 241 EIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLTTYL 300
Query: 266 DEEILIIRDASGIPEVLTR 284
D+++ I R G VL R
Sbjct: 301 DKDLRISRGDGGSVFVLIR 319
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 101 DVNERITGLERLNPTPRPTTSP-FLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
+V+E + LE NPTP P P L G W + S E P A
Sbjct: 159 EVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTASS-----------ELLPLLAAGSLP 207
Query: 160 MDVVIKDGKANITANFKLLNSI-------ESKFSFSTKLLVEGPLRLKEEYIEGILESPT 212
+ + K + T +F ++NS FS S V P R++ + EG L+ P
Sbjct: 208 LLKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSPTRIQVTFKEGSLQPPE 267
Query: 213 VIEE-TIPEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLSGTFQRLFM 261
+ + +PE + G Q++ ++ + A I ISG L+IP+ G ++
Sbjct: 268 IKSKIDLPENINIFGQQLSLGPLLQSLGPLENVVANISRVISGQSPLKIPIPGERTSSWL 327
Query: 262 I-SYLDEEILIIRDASGI 278
I +YLD+++ I R G+
Sbjct: 328 ITTYLDKDLRISRGDGGL 345
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 42/204 (20%)
Query: 101 DVNERITGLERLNPTPRPT-TSPFLEGRWNFEW---------FGSGSPGFFVARFIFERF 150
+V E +T LE NPTP P + L G W + G+ F I +
Sbjct: 173 EVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELLPILAVGAAPLFKVDEISQEI 232
Query: 151 PP---TLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGI 207
T+ N S + + TA+F V+ P R++ ++ EG
Sbjct: 233 DTNSMTIVNASTISSPFASFSFSATASFD----------------VQSPSRIEVQFKEGS 276
Query: 208 LESPTVIEET-IPEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLSGT- 255
+ P + +P ++ G Q + +QQ A I +ISG L++P+ G
Sbjct: 277 FQPPKISSSVDLPAEVDIFGQKISLGPVQQVLNPLQQAFASIAGSISGQPPLKLPIPGNN 336
Query: 256 -FQRLFMISYLDEEILIIRDASGI 278
+ + +YLD+++ I R G+
Sbjct: 337 RARSWLLTTYLDKDLRISRGDGGL 360
>sp|Q3KHB4|GLND_PSEPF [Protein-PII] uridylyltransferase OS=Pseudomonas fluorescens
(strain Pf0-1) GN=glnD PE=3 SV=1
Length = 900
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 38/176 (21%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A + +++ I D + IT++ S+F+ T ++
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARV-ITSS--------SQFTLDTYIV 751
Query: 193 VE--------GPLRLKE------EYIEGILESPTVIEETIPEQLKG-AFNQAVT------ 231
++ P+R+K+ E + + PT+I+ +P QLK AF VT
Sbjct: 752 LDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHNDAQ 811
Query: 232 ---TVQQLPAPIRDAI---SGGLRIPLSGTFQ--RLFMISYLDEEILIIRDASGIP 279
TV +L AP R + GG+ + + Q ++ + E++ I DA P
Sbjct: 812 RPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQP 867
>sp|C3K5E4|GLND_PSEFS [Protein-PII] uridylyltransferase OS=Pseudomonas fluorescens
(strain SBW25) GN=glnD PE=3 SV=1
Length = 900
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 40/177 (22%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A + +++ I D + IT++ S+F+ T ++
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARV-ITSS--------SQFTLDTYIV 751
Query: 193 VE--------GPLRLKEEYIEGILES-------PTVIEETIPEQLKG-AFNQAVT----- 231
++ P+R+K+ EG+ E+ PT+I+ +P QLK AF VT
Sbjct: 752 LDTEGESIGDNPVRVKK-IREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDA 810
Query: 232 ----TVQQLPAPIRDAI---SGGLRIPLSGTFQ--RLFMISYLDEEILIIRDASGIP 279
TV +L AP R + GG+ + + Q ++ + E++ I DA P
Sbjct: 811 QRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQP 867
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 259 LFMISYLDEEILIIRDASGIPEVLTRLDPP 288
LF ISYLDE++ + RD G VL R++ P
Sbjct: 244 LFEISYLDEDLQVGRDGKGNVFVLERIEKP 273
>sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica
GN=Os10g0544900 PE=2 SV=1
Length = 393
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 59 APAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRP 118
+PA ++ + ++ LL +KDAG LVAG+ + M + N + ++ P
Sbjct: 18 SPAGRPRKGSDAAGRQDGLLWYKDAG---QLVAGEFS-MAVVQANNLLEDHSQVESGPLS 73
Query: 119 TTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLS------NMDVVIKDGKANIT 172
TT P L+G + G G P AR+I + L + + DV+ K +A
Sbjct: 74 TTDPNLQGTLVGVYDGHGGPE--TARYINDHLFNHLRGFASEHKCMSADVIRKAFRATEE 131
Query: 173 ANFKLLNS 180
F +++S
Sbjct: 132 GFFSVVSS 139
>sp|A4XWU3|GLND_PSEMY [Protein-PII] uridylyltransferase OS=Pseudomonas mendocina (strain
ymp) GN=glnD PE=3 SV=1
Length = 899
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 35/134 (26%)
Query: 133 FGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLL 192
F G+ F A + F T+A +S +++ I D + IT+ S+F+ T ++
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARI-ITST--------SQFTLDTYVV 751
Query: 193 VEG--------PLRLKEEYIEGILES-------PTVIEETIPEQLKG-AFNQAVT----- 231
++ P R+K+ EG++E+ PT+I+ +P QLK AF VT
Sbjct: 752 LDADGGSIGDNPARIKQ-IREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTIHNDA 810
Query: 232 ----TVQQLPAPIR 241
T+ +L AP R
Sbjct: 811 QRPVTILELTAPDR 824
>sp|Q8CP76|EBH_STAES Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=ebh PE=4 SV=1
Length = 9439
Score = 32.0 bits (71), Expect = 5.0, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Query: 153 TLANLSNMDVVIKDGKANITANFKLLNSIESKFSFS-----------------------T 189
T+ NLSN++ KD + N+ + L ++ + +
Sbjct: 5399 TIRNLSNLNNAQKDAEKNLVNSASTLEQVQQNLQTAQQLDNAMGELRQSIAKKDQVKADS 5458
Query: 190 KLLVEGPLRLKEEYIEGILESPTVIEETI-PEQLKGAFNQAVTTVQ 234
K L E P ++K+ Y + + T+I ET PE LK +QA +VQ
Sbjct: 5459 KYLNEDP-QIKQNYDDAVQRVETIINETQNPELLKANIDQATQSVQ 5503
>sp|Q5HPA2|EBH_STAEQ Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=ebh PE=4 SV=2
Length = 9439
Score = 32.0 bits (71), Expect = 5.0, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Query: 153 TLANLSNMDVVIKDGKANITANFKLLNSIESKFSFS-----------------------T 189
T+ NLSN++ KD + N+ + L ++ + +
Sbjct: 5399 TIRNLSNLNNAQKDAEKNLVNSASTLEQVQQNLQTAQQLDNAMGELRQSIAKKDQVKADS 5458
Query: 190 KLLVEGPLRLKEEYIEGILESPTVIEETI-PEQLKGAFNQAVTTVQ 234
K L E P ++K+ Y + + T+I ET PE LK +QA +VQ
Sbjct: 5459 KYLNEDP-QIKQNYDDAVQRVETIINETQNPELLKANIDQATQSVQ 5503
>sp|Q57118|NIFK_FRAAL Nitrogenase molybdenum-iron protein beta chain OS=Frankia alni
GN=nifK PE=3 SV=1
Length = 528
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 183 SKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKG--AFNQAVTTVQQLPAP 239
+KFS ++ +L E LR EYIE + TV+ ET P +KG AF AV V ++ P
Sbjct: 293 AKFSRASLVLQESTLRRTAEYIEKDWKQETVLLET-PLGVKGTDAFLTAVAKVAEVEVP 350
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,914,292
Number of Sequences: 539616
Number of extensions: 4659207
Number of successful extensions: 12671
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 12651
Number of HSP's gapped (non-prelim): 40
length of query: 301
length of database: 191,569,459
effective HSP length: 117
effective length of query: 184
effective length of database: 128,434,387
effective search space: 23631927208
effective search space used: 23631927208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)