Query 022197
Match_columns 301
No_of_seqs 139 out of 759
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 08:45:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022197.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022197hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1582 UDP-galactose transpor 100.0 8E-63 1.7E-67 433.2 14.2 289 3-294 20-320 (367)
2 KOG1581 UDP-galactose transpor 100.0 1.2E-57 2.6E-62 407.0 24.6 277 20-299 10-305 (327)
3 KOG1580 UDP-galactose transpor 100.0 6.8E-59 1.5E-63 401.4 9.1 283 15-300 4-306 (337)
4 PF08449 UAA: UAA transporter 100.0 1.4E-52 3E-57 388.7 23.8 273 25-300 1-290 (303)
5 KOG1583 UDP-N-acetylglucosamin 100.0 1.4E-44 3.1E-49 318.8 5.7 269 24-300 3-307 (330)
6 KOG1443 Predicted integral mem 99.9 9.2E-25 2E-29 196.0 14.7 270 19-296 7-304 (349)
7 KOG1441 Glucose-6-phosphate/ph 99.9 5.3E-25 1.2E-29 203.0 11.7 266 23-297 16-297 (316)
8 KOG1444 Nucleotide-sugar trans 99.9 2.4E-23 5.3E-28 188.8 17.9 254 35-296 23-289 (314)
9 PTZ00343 triose or hexose phos 99.9 4.4E-22 9.6E-27 188.2 26.3 269 22-298 47-339 (350)
10 TIGR00817 tpt Tpt phosphate/ph 99.9 2.2E-21 4.8E-26 179.5 23.5 264 26-298 4-284 (302)
11 TIGR00803 nst UDP-galactose tr 99.8 3.1E-20 6.8E-25 164.6 5.3 182 108-300 2-217 (222)
12 PF06027 DUF914: Eukaryotic pr 99.8 2.3E-17 5E-22 154.0 18.2 210 81-298 76-296 (334)
13 PF04142 Nuc_sug_transp: Nucle 99.8 4.5E-17 9.8E-22 146.6 17.6 209 83-298 16-244 (244)
14 COG5070 VRG4 Nucleotide-sugar 99.7 1.6E-17 3.5E-22 143.6 11.4 266 18-292 5-281 (309)
15 KOG1442 GDP-fucose transporter 99.6 4.8E-16 1E-20 138.1 1.4 256 39-298 43-318 (347)
16 PF03151 TPT: Triose-phosphate 99.5 4E-13 8.6E-18 111.7 10.5 128 171-298 1-144 (153)
17 TIGR00950 2A78 Carboxylate/Ami 99.4 5.2E-12 1.1E-16 113.7 17.5 233 53-299 16-256 (260)
18 KOG2234 Predicted UDP-galactos 99.4 1.8E-12 4E-17 119.7 11.7 209 84-299 92-314 (345)
19 PRK11453 O-acetylserine/cystei 99.2 6.2E-09 1.4E-13 96.3 24.1 258 32-298 12-278 (299)
20 PRK11689 aromatic amino acid e 99.2 2.4E-09 5.2E-14 99.0 20.2 233 54-299 31-279 (295)
21 PLN00411 nodulin MtN21 family 99.1 8.6E-09 1.9E-13 97.9 20.1 270 24-299 13-320 (358)
22 KOG3912 Predicted integral mem 99.1 8.5E-09 1.8E-13 92.6 17.7 210 83-295 83-322 (372)
23 PRK11272 putative DMT superfam 99.1 3.9E-08 8.5E-13 90.7 21.7 259 24-299 8-277 (292)
24 COG0697 RhaT Permeases of the 99.0 8.7E-08 1.9E-12 86.7 21.5 195 90-298 76-278 (292)
25 PRK15430 putative chlorampheni 99.0 6.6E-08 1.4E-12 89.4 19.2 191 91-298 80-276 (296)
26 KOG2765 Predicted membrane pro 98.9 2.4E-09 5.2E-14 99.5 5.5 205 91-299 166-382 (416)
27 TIGR03340 phn_DUF6 phosphonate 98.9 5E-08 1.1E-12 89.4 13.9 197 91-299 70-275 (281)
28 PRK10532 threonine and homoser 98.9 5.3E-07 1.1E-11 83.2 20.7 260 17-299 6-273 (293)
29 KOG2766 Predicted membrane pro 98.8 1.7E-10 3.7E-15 102.1 -2.7 208 74-290 68-282 (336)
30 TIGR00688 rarD rarD protein. T 98.5 4.5E-05 9.7E-10 68.8 21.1 177 89-284 75-252 (256)
31 TIGR00776 RhaT RhaT L-rhamnose 98.1 0.00035 7.5E-09 64.6 19.4 190 92-298 67-279 (290)
32 KOG4510 Permease of the drug/m 98.1 1.8E-06 3.8E-11 77.4 1.9 206 83-300 95-318 (346)
33 PF13536 EmrE: Multidrug resis 98.0 1.9E-05 4E-10 62.6 6.3 78 82-162 32-110 (113)
34 PF00892 EamA: EamA-like trans 97.9 4.2E-05 9.1E-10 60.2 7.6 117 36-157 3-125 (126)
35 KOG4314 Predicted carbohydrate 97.4 0.0029 6.3E-08 54.8 11.1 101 90-194 59-159 (290)
36 PF03151 TPT: Triose-phosphate 97.1 0.011 2.3E-07 48.6 11.6 67 90-158 87-153 (153)
37 PLN00411 nodulin MtN21 family 96.7 0.019 4.1E-07 54.7 11.2 65 95-161 267-331 (358)
38 PRK15051 4-amino-4-deoxy-L-ara 96.5 0.022 4.9E-07 45.0 9.1 64 92-157 45-108 (111)
39 TIGR00950 2A78 Carboxylate/Ami 96.2 0.089 1.9E-06 47.0 12.3 58 94-153 202-259 (260)
40 PF08449 UAA: UAA transporter 96.1 0.052 1.1E-06 50.3 10.1 126 34-161 164-300 (303)
41 PF05653 Mg_trans_NIPA: Magnes 95.8 0.084 1.8E-06 49.1 10.1 66 93-160 59-124 (300)
42 TIGR00817 tpt Tpt phosphate/ph 95.6 0.1 2.3E-06 48.0 10.2 61 99-161 236-296 (302)
43 TIGR00688 rarD rarD protein. T 95.4 0.2 4.3E-06 44.9 11.0 124 170-297 2-132 (256)
44 PRK10452 multidrug efflux syst 95.2 0.078 1.7E-06 42.6 6.8 74 86-161 32-106 (120)
45 PRK11272 putative DMT superfam 95.1 0.31 6.7E-06 44.8 11.4 64 95-160 224-287 (292)
46 PRK02971 4-amino-4-deoxy-L-ara 95.0 0.097 2.1E-06 42.6 6.9 69 91-161 55-125 (129)
47 PF00892 EamA: EamA-like trans 94.9 0.036 7.8E-07 43.2 4.0 108 183-298 4-117 (126)
48 PRK15430 putative chlorampheni 94.8 0.35 7.5E-06 44.5 11.0 126 168-298 6-136 (296)
49 COG5006 rhtA Threonine/homoser 94.7 1.1 2.4E-05 40.5 13.2 191 89-298 76-273 (292)
50 PTZ00343 triose or hexose phos 94.0 1.4 3E-05 41.8 13.3 59 98-158 290-348 (350)
51 PRK11689 aromatic amino acid e 93.9 1 2.2E-05 41.4 12.0 65 94-160 225-289 (295)
52 PRK10532 threonine and homoser 93.8 1.2 2.7E-05 40.8 12.4 65 94-160 219-283 (293)
53 COG2510 Predicted membrane pro 93.8 0.16 3.6E-06 41.0 5.5 72 85-158 67-139 (140)
54 PRK09541 emrE multidrug efflux 93.6 0.33 7.1E-06 38.3 7.0 70 89-160 35-105 (110)
55 PRK11453 O-acetylserine/cystei 93.3 1.7 3.7E-05 40.0 12.3 65 95-161 226-290 (299)
56 COG2510 Predicted membrane pro 93.1 0.061 1.3E-06 43.5 2.0 121 172-298 5-130 (140)
57 PRK11431 multidrug efflux syst 92.2 0.6 1.3E-05 36.5 6.6 70 88-159 33-103 (105)
58 PF06800 Sugar_transport: Suga 92.0 9.7 0.00021 34.9 17.5 176 89-280 50-235 (269)
59 COG2076 EmrE Membrane transpor 91.9 0.63 1.4E-05 36.4 6.3 72 87-160 33-105 (106)
60 PF04657 DUF606: Protein of un 91.1 1.4 3E-05 36.2 7.9 118 173-297 4-131 (138)
61 PRK10650 multidrug efflux syst 90.5 1.1 2.4E-05 35.3 6.6 67 88-156 39-106 (109)
62 TIGR00803 nst UDP-galactose tr 90.3 1.6 3.4E-05 38.3 8.2 62 92-155 160-221 (222)
63 PF13536 EmrE: Multidrug resis 89.8 1.3 2.8E-05 34.6 6.5 86 210-298 6-97 (113)
64 COG0697 RhaT Permeases of the 89.1 7.4 0.00016 34.6 11.9 62 96-159 227-288 (292)
65 PF10639 UPF0546: Uncharacteri 88.9 0.5 1.1E-05 37.5 3.4 70 85-156 42-112 (113)
66 TIGR03340 phn_DUF6 phosphonate 88.2 0.36 7.7E-06 44.1 2.5 60 94-155 221-280 (281)
67 PF06027 DUF914: Eukaryotic pr 87.2 7.6 0.00017 36.7 10.8 59 102-162 251-309 (334)
68 COG2962 RarD Predicted permeas 86.3 8.9 0.00019 35.4 10.3 71 88-160 215-285 (293)
69 TIGR00776 RhaT RhaT L-rhamnose 85.7 9 0.00019 35.2 10.4 68 90-159 217-289 (290)
70 PF04142 Nuc_sug_transp: Nucle 83.0 16 0.00034 32.9 10.5 103 39-146 129-241 (244)
71 PF00893 Multi_Drug_Res: Small 81.4 2.8 6.1E-05 31.8 4.3 57 91-149 36-93 (93)
72 COG2962 RarD Predicted permeas 80.1 50 0.0011 30.6 18.1 38 120-159 108-145 (293)
73 KOG1441 Glucose-6-phosphate/ph 76.9 21 0.00047 33.4 9.5 70 90-161 241-310 (316)
74 COG3238 Uncharacterized protei 68.9 16 0.00035 30.4 6.0 122 171-298 6-137 (150)
75 KOG2234 Predicted UDP-galactos 56.4 1.2E+02 0.0026 28.8 10.0 66 91-158 257-322 (345)
76 COG5006 rhtA Threonine/homoser 52.7 28 0.00062 31.7 5.0 58 100-159 226-283 (292)
77 KOG1583 UDP-N-acetylglucosamin 49.2 57 0.0012 30.2 6.4 33 125-159 283-315 (330)
78 KOG1582 UDP-galactose transpor 48.8 1.5E+02 0.0033 27.5 9.0 50 111-162 287-336 (367)
79 PF06800 Sugar_transport: Suga 47.8 2.2E+02 0.0049 26.0 11.9 64 89-154 200-267 (269)
80 PRK02971 4-amino-4-deoxy-L-ara 46.7 1.3E+02 0.0029 24.2 7.7 17 282-298 97-113 (129)
81 PF14150 YesK: YesK-like prote 41.6 89 0.0019 23.2 5.3 66 123-194 11-81 (81)
82 COG3949 Uncharacterized membra 41.1 1.3E+02 0.0028 28.6 7.6 41 91-131 219-266 (349)
83 KOG4831 Unnamed protein [Funct 33.9 48 0.001 26.0 3.0 70 85-157 53-124 (125)
84 PF05653 Mg_trans_NIPA: Magnes 27.0 1.8E+02 0.0038 27.0 6.1 29 167-195 4-32 (300)
85 PRK13499 rhamnose-proton sympo 26.8 5.6E+02 0.012 24.4 10.4 99 168-275 5-109 (345)
86 PF15345 TMEM51: Transmembrane 25.4 1.2E+02 0.0027 27.0 4.5 17 143-159 11-27 (233)
87 PF05297 Herpes_LMP1: Herpesvi 23.0 28 0.0006 32.2 0.0 88 114-206 53-141 (381)
88 KOG2922 Uncharacterized conser 21.3 56 0.0012 30.7 1.6 68 92-161 72-139 (335)
89 PF10639 UPF0546: Uncharacteri 20.6 93 0.002 24.6 2.5 64 232-299 37-106 (113)
90 KOG4112 Signal peptidase subun 20.5 2.5E+02 0.0054 21.5 4.7 25 20-46 25-49 (101)
No 1
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8e-63 Score=433.24 Aligned_cols=289 Identities=47% Similarity=0.836 Sum_probs=269.7
Q ss_pred Cccccc--eeEEeeecCCCchhHHHHHHHHHHHHHHhhHHHHhhhhhccCCCC-chhHHHHHHHHHHHHH--HHHhcccC
Q 022197 3 KNEEQT--RSLFGISLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLVL--IYLQGFTT 77 (301)
Q Consensus 3 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~-~~~~lt~~q~l~~~~~--~~~~~~~~ 77 (301)
++|||| +|++|+++++.|+|+||++|.+|+|+.|+.||++||.|++.++|+ ++|.+|+.|++++..+ ++++.+++
T Consensus 20 ~s~e~p~ki~llg~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~ 99 (367)
T KOG1582|consen 20 ISEEQPSKIKLLGFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQT 99 (367)
T ss_pred ccccCCcceeEEeeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecc
Confidence 467788 559999999999999999999999999999999999999999997 9999999999999654 45678888
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhee
Q 022197 78 KQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT 157 (301)
Q Consensus 78 ~~~~~p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~ 157 (301)
+++.+|||.|..+++....++.++|.|+.|+|||+|+++||||++|||++|.+++| |||++.+|.++.+++.|+++|+
T Consensus 100 k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqG--kRY~v~d~~aA~lm~lGli~FT 177 (367)
T KOG1582|consen 100 KRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQG--KRYGVHDYIAAMLMSLGLIWFT 177 (367)
T ss_pred cceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeecc--ccccHHHHHHHHHHHHHHHhhh
Confidence 88999999999999999999999999999999999999999999999999999975 9999999999999999999999
Q ss_pred ccCCCCCCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhcc
Q 022197 158 LADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHL 237 (301)
Q Consensus 158 ~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p 237 (301)
++|+..+|+|+..|+.++..++++||+.++.||+.++.++. +..||+||+.-+++|++++.++.+||+.++|.|+.+||
T Consensus 178 LADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~-ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp 256 (367)
T KOG1582|consen 178 LADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPA-SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHP 256 (367)
T ss_pred hcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCC-CcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCc
Confidence 99999899999999999999999999999999999998864 46899999999999999999999999999999999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccc-ccee
Q 022197 238 Y-VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNIL-TCEY 294 (301)
Q Consensus 238 ~-~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~-~~~G 294 (301)
. .+.+.++.++++++||.++...++.|||++.++++|.||++|+++ ..++|-+ .|.|
T Consensus 257 ~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~g 320 (367)
T KOG1582|consen 257 VRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSG 320 (367)
T ss_pred HhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhh
Confidence 6 888999999999999999999999999999999999999999886 5566655 3444
No 2
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-57 Score=407.04 Aligned_cols=277 Identities=25% Similarity=0.377 Sum_probs=254.9
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHhhhhhcc------CCCCchhHHHHHHHHHHHHHH--HHhccc-CCCCCCchhHHHHH
Q 022197 20 PKWQQFLICSSGFFFGYLVNGVCEEYVYNR------LQFSYGWYFTFIQGFVYLVLI--YLQGFT-TKQMMNPWKTYVKL 90 (301)
Q Consensus 20 ~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~------~~f~~~~~lt~~q~l~~~~~~--~~~~~~-~~~~~~p~~~y~~~ 90 (301)
++.+++++|+.||+++|++||++||+|+++ ++|+++.++.++|.++..++. ++++++ +.+.+.|+++|...
T Consensus 10 ~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~i 89 (327)
T KOG1581|consen 10 NKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLI 89 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHH
Confidence 456799999999999999999999999764 469999999999998887664 344443 35667899999999
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCC-----C
Q 022197 91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTS-----P 165 (301)
Q Consensus 91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~-----~ 165 (301)
++....+.+|+++||||||||+|++.||||+||||+++.++ +||||+..||++++++++|+.+|++.+.+++ .
T Consensus 90 s~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lv--y~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~ 167 (327)
T KOG1581|consen 90 SFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLV--YGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGR 167 (327)
T ss_pred HHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHH--hcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCC
Confidence 99999999999999999999999999999999999999999 7899999999999999999999999866442 2
Q ss_pred CcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHH
Q 022197 166 NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVF 245 (301)
Q Consensus 166 ~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~ 245 (301)
++++.|+.++..++++||++++.||++++++ +.++.+||+|+|+++.++....++..|.+.++++|+.+||+++.|+++
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l 246 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKY-KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILL 246 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhccC-CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHH
Confidence 5779999999999999999999999999965 567899999999999999998888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEee
Q 022197 246 EAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVN 299 (301)
Q Consensus 246 ~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~ 299 (301)
+++|+++||.|||.++++|||+|.++++|+||++|+++ ||+++..||.|+.+||
T Consensus 247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVF 305 (327)
T KOG1581|consen 247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVF 305 (327)
T ss_pred HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeeh
Confidence 99999999999999999999999999999999999876 9999999999999997
No 3
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-59 Score=401.41 Aligned_cols=283 Identities=25% Similarity=0.383 Sum_probs=245.8
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhhHHHHhhhhhccC---------CCCchhHHHHHHHHHHHHHHHH-hccc--CCCCCC
Q 022197 15 SLTDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRL---------QFSYGWYFTFIQGFVYLVLIYL-QGFT--TKQMMN 82 (301)
Q Consensus 15 ~~~~~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~~---------~f~~~~~lt~~q~l~~~~~~~~-~~~~--~~~~~~ 82 (301)
+-+-.|.+.++++|++||++||..||+.||+|.++. +|.+...+.+.||.++.+++-. -..| .+.++.
T Consensus 4 ~~s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t 83 (337)
T KOG1580|consen 4 VRSWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNT 83 (337)
T ss_pred cccccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCC
Confidence 344456678899999999999999999999997532 3444445555555555444321 1222 345678
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC
Q 022197 83 PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ 162 (301)
Q Consensus 83 p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~ 162 (301)
|.+.|+.+++.|..+|..+|.|++|+|||+|++.|||||||||++|+++ .+|+|+|++|.++++|++|+++|+|.+.+
T Consensus 84 ~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~--~~KsY~w~kY~cVL~IV~GValFmYK~~K 161 (337)
T KOG1580|consen 84 PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF--AHKSYHWRKYCCVLMIVVGVALFMYKENK 161 (337)
T ss_pred cchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh--hcccccHHHHHHHHHHHHHHHHhhccccc
Confidence 9999999999999999999999999999999999999999999999999 79999999999999999999999998764
Q ss_pred C---CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHH
Q 022197 163 T---SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYV 239 (301)
Q Consensus 163 ~---~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~ 239 (301)
. +++...+|-+++++|+.+||+++..|||+.+.+.+. ...||+|+|+++...+...++++||+++.+.|.+|||++
T Consensus 162 v~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~-g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~ 240 (337)
T KOG1580|consen 162 VGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRT-GTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYV 240 (337)
T ss_pred cCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccC-chhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHH
Confidence 3 234567899999999999999999999999876543 457999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEeec
Q 022197 240 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVNT 300 (301)
Q Consensus 240 ~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~~ 300 (301)
+.++.+.++++++||.++|.++.+|||||+++++|+||++|++. +|++++.||+|..+||.
T Consensus 241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~ 306 (337)
T KOG1580|consen 241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFS 306 (337)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999764 99999999999998874
No 4
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=100.00 E-value=1.4e-52 Score=388.68 Aligned_cols=273 Identities=31% Similarity=0.509 Sum_probs=247.3
Q ss_pred HHHHHHHHHHHHhhHHHHhhhhhccCCCC-chhHHHHHHHHHHHHHHHH--hccc-CCCCCCchhHHHHHHHHHHHHHHH
Q 022197 25 FLICSSGFFFGYLVNGVCEEYVYNRLQFS-YGWYFTFIQGFVYLVLIYL--QGFT-TKQMMNPWKTYVKLSAVLMGSHGL 100 (301)
Q Consensus 25 ~~~~~~gi~~~~~~~g~~qE~i~~~~~f~-~~~~lt~~q~l~~~~~~~~--~~~~-~~~~~~p~~~y~~~s~~~~~~~~l 100 (301)
+++|++|++++|+.||++||++++++++. +|++++++|++.+.+.... ...+ +++++.|+++|++.++++..++.+
T Consensus 1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (303)
T PF08449_consen 1 FLICVAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVL 80 (303)
T ss_pred CEeeHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999887776 8999999998777665432 2223 556788999999999999999999
Q ss_pred HHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCc------chHHHHH
Q 022197 101 TKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNF------SMIGVIM 174 (301)
Q Consensus 101 ~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~------~~~G~~l 174 (301)
+|+|++|+|+|+|+++||||++|||++++++ +||||+++||++++++++|+++++++|.+++++. +..|+++
T Consensus 81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~--~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~l 158 (303)
T PF08449_consen 81 SNAALKYISYPTQIVFKSSKPIPVMILGVLI--LGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIIL 158 (303)
T ss_pred HHHHHHhCChHHHHHHhhhHHHHHHHHHHHh--cCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHH
Confidence 9999999999999999999999999999999 7899999999999999999999999986443221 2349999
Q ss_pred HHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhh--hccHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 022197 175 ISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLL--TGELFKAWNSCSQHLYVYGVLVFEAMATFI 252 (301)
Q Consensus 175 l~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~--~gel~~~~~f~~~~p~~~~~l~~~~l~~~~ 252 (301)
+++|+++||+++++|||+++++++ ++.|+|+|+|++++|+.++..+. +||+.++++++.+||+.+.+++++++++++
T Consensus 159 l~~sl~~~a~~~~~qe~~~~~~~~-~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~ 237 (303)
T PF08449_consen 159 LLLSLLLDAFTGVYQEKLFKKYGK-SPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGAL 237 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999999999998865 58999999999999999888877 899999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEeec
Q 022197 253 GQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVNT 300 (301)
Q Consensus 253 g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~~ 300 (301)
||.+++.+++++||++.++++|+||++|+++ ||++++.||+|+++|+.
T Consensus 238 g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~ 290 (303)
T PF08449_consen 238 GQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFA 290 (303)
T ss_pred HHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHH
Confidence 9999999999999999999999999999775 99999999999998863
No 5
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=318.76 Aligned_cols=269 Identities=22% Similarity=0.333 Sum_probs=235.3
Q ss_pred HHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHH---HHHhcccCCCCCCchhHHHHHHHHHHHHHHH
Q 022197 24 QFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL---IYLQGFTTKQMMNPWKTYVKLSAVLMGSHGL 100 (301)
Q Consensus 24 ~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~---~~~~~~~~~~~~~p~~~y~~~s~~~~~~~~l 100 (301)
+-+...++++++||.+.+..|.+. +++++.++++|++|++ ++.+ ++.+.+...++++|.|.|+....+++..+.+
T Consensus 3 ~a~~ai~~vf~GCcsnvv~lE~L~-~~~pgsgNLITFaqFl-Fia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~ 80 (330)
T KOG1583|consen 3 MAAAAISLVFGGCCSNVVFLELLV-RNEPGSGNLITFAQFL-FIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVT 80 (330)
T ss_pred hHHHHHHHHHHhhhchHHHHHHHH-HhCCCCeeehHHHHHH-HHHHhceeeeccccccCCCCchhhhheehheeeeeeee
Confidence 345678899999999999999997 6778888999999954 5543 2334454556889999999998888999999
Q ss_pred HHHHhhc-cchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCC---------C-----C
Q 022197 101 TKGSLAF-LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT---------S-----P 165 (301)
Q Consensus 101 ~n~aL~y-vs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~---------~-----~ 165 (301)
+|+|++| ||+|.|+++||.+++.+|++|+++ ++|||+.+||.+++++++|++++++.+.++ + +
T Consensus 81 NN~al~f~I~~PlHiIfRsgsll~nM~~g~il--~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~ 158 (330)
T KOG1583|consen 81 NNYALKFNIPMPLHIIFRSGSLLANMILGWIL--LGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSD 158 (330)
T ss_pred ccceeeecccceEEEEEecCcHHHHHHHHHHh--ccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccccc
Confidence 9999999 999999999999999999999999 679999999999999999999999975432 0 1
Q ss_pred C-cchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhc--------
Q 022197 166 N-FSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQH-------- 236 (301)
Q Consensus 166 ~-~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~-------- 236 (301)
. .+.+|+.++.++++++|..+.+||+++++|+|+ |.|.|||+|++++|+++ +.-+|+.+++.-+...
T Consensus 159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Fl---f~~~div~~~~~~~~se~~~~p~~ 234 (330)
T KOG1583|consen 159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFL---FMGDDIVSHWRLAFKSESYLIPLL 234 (330)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHH---HhcchHHHHHHHHhcCcceecccc
Confidence 1 235799999999999999999999999999986 89999999999999886 5567888888776555
Q ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEeec
Q 022197 237 ----LYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVNT 300 (301)
Q Consensus 237 ----p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~~ 300 (301)
|..+.+++.++++|+.|.-.+|.+.+++++||++++.|+||++|+++ -|++|+..|+|..+||.
T Consensus 235 g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~ 307 (330)
T KOG1583|consen 235 GFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFF 307 (330)
T ss_pred CccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999876 89999999999999874
No 6
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.92 E-value=9.2e-25 Score=195.95 Aligned_cols=270 Identities=15% Similarity=0.254 Sum_probs=203.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHhhhhhc--cCCCCchhHHHHHHHHHHHHHHHH-----hcccCC-CCCCchhHHH--
Q 022197 19 RPKWQQFLICSSGFFFGYLVNGVCEEYVYN--RLQFSYGWYFTFIQGFVYLVLIYL-----QGFTTK-QMMNPWKTYV-- 88 (301)
Q Consensus 19 ~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~--~~~f~~~~~lt~~q~l~~~~~~~~-----~~~~~~-~~~~p~~~y~-- 88 (301)
++..+.-.+...|+...|...++.....++ +++|++|.+.+.+|..+-..++.+ ++..++ +.+..|+.|+
T Consensus 7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~ 86 (349)
T KOG1443|consen 7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRR 86 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHH
Confidence 344333333344444555544544444332 456999999999997665444322 222222 3457788887
Q ss_pred --HHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCC
Q 022197 89 --KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPN 166 (301)
Q Consensus 89 --~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~ 166 (301)
+.+++.+.+++++|+|++|++++.|+|.||+.++++.+++.+++ -+|++|.-.+.+++|.+|++++++.+ ++
T Consensus 87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~--lEk~~w~L~l~v~lI~~Glflft~Ks----Tq 160 (349)
T KOG1443|consen 87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFK--LEKFRWALVLIVLLIAVGLFLFTYKS----TQ 160 (349)
T ss_pred hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHH--hHHHHHHHHHHHHHHhhheeEEEecc----cc
Confidence 78999999999999999999999999999999999999999994 69999999999999999999999976 37
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHHHhhCC--CCCHHHHHHHHHHHhHHHHhH-HHhhhccH----HHHHHHHHhcc-H
Q 022197 167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNP--ETTQMEMLFCSTVVGLPMLIP-PMLLTGEL----FKAWNSCSQHL-Y 238 (301)
Q Consensus 167 ~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~--~~~~~e~mfy~~~~~~~~~~~-~~~~~gel----~~~~~f~~~~p-~ 238 (301)
++..|+.++.+|.+++|+++.+.+.++++++ +.+|.+++++..++....+++ .+.++|-. .+.+++ .++ .
T Consensus 161 f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~--~d~~~ 238 (349)
T KOG1443|consen 161 FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRF--QDTGL 238 (349)
T ss_pred eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHh--cCccH
Confidence 8999999999999999999999999998764 457899999999876554444 45567632 122222 233 2
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEE
Q 022197 239 VYG---VLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYAC 296 (301)
Q Consensus 239 ~~~---~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~ 296 (301)
++. .+.+-+..+++.-.+-|.+.++++.+|.+++|..|+..++++ ++.++..+|.|..
T Consensus 239 ~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~ 304 (349)
T KOG1443|consen 239 ILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLA 304 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHH
Confidence 333 344445555555678899999999999999999999999775 7788888898864
No 7
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.92 E-value=5.3e-25 Score=202.99 Aligned_cols=266 Identities=16% Similarity=0.246 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHH-Hh--cccCC---CCCCchhHHHHHHHHHHH
Q 022197 23 QQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIY-LQ--GFTTK---QMMNPWKTYVKLSAVLMG 96 (301)
Q Consensus 23 ~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~-~~--~~~~~---~~~~p~~~y~~~s~~~~~ 96 (301)
....++.+-.+++-....+...+++++.+|++|..+|.+|..+...... .+ +..+. +++.++++-+++++.++.
T Consensus 16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~ 95 (316)
T KOG1441|consen 16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCI 95 (316)
T ss_pred HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHH
Confidence 4556666666777777777788888778999999999998655543322 22 22221 245788889999999999
Q ss_pred HHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHH
Q 022197 97 SHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMIS 176 (301)
Q Consensus 97 ~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~ 176 (301)
+.+++|.|++|+|+++.|+.|+..|+++.++++++ .+|++++..|+++++++.|++++++.|. ++++.|+...+
T Consensus 96 ~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~--~~~~~s~~~~lsL~piv~GV~ias~~e~----~fn~~G~i~a~ 169 (316)
T KOG1441|consen 96 SHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLL--LGKTYSSMTYLSLLPIVFGVAIASVTEL----SFNLFGFISAM 169 (316)
T ss_pred HHHhcchhhhccchhHHHHHHhhcchhHHHHHHHH--hCCCCcceEEEEEEEeeeeEEEeeeccc----cccHHHHHHHH
Confidence 99999999999999999999999999999999999 7899999999999999999999999774 78999999999
Q ss_pred HHHHHHhhhHHHHHHHHhh-CCCCCHHHHHHHHHHHhHHHHh-HHHhh-hccHHHHHHHHHhccH--HHHHHHHHHHHHH
Q 022197 177 GALIMDSFLGNLQEAIFTM-NPETTQMEMLFCSTVVGLPMLI-PPMLL-TGELFKAWNSCSQHLY--VYGVLVFEAMATF 251 (301)
Q Consensus 177 ~sl~~dg~~~~~qe~l~~~-~~~~~~~e~mfy~~~~~~~~~~-~~~~~-~gel~~~~~f~~~~p~--~~~~l~~~~l~~~ 251 (301)
.+.+..+.+++++++++++ ..+.++++.++|..++++..++ |.... +|+.. . .+ ..++. -....++++++++
T Consensus 170 ~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~sv~~f 246 (316)
T KOG1441|consen 170 ISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GF-LTAPWFVTFLILLLNSVLAF 246 (316)
T ss_pred HHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-ee-eccccchhhHHHHHHHHHHH
Confidence 9999999999999999963 2356789999999999988888 55432 33332 1 11 11121 1334556669999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccceeEEE
Q 022197 252 IGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTCEYACL 297 (301)
Q Consensus 252 ~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~~G~~l 297 (301)
+.|...|.++.++||+|.++.+..|..+-++ +++++|+.|..|.++
T Consensus 247 ~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~i 297 (316)
T KOG1441|consen 247 LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAI 297 (316)
T ss_pred HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHH
Confidence 9999999999999999999999999966543 388999999998764
No 8
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=2.4e-23 Score=188.82 Aligned_cols=254 Identities=15% Similarity=0.228 Sum_probs=209.9
Q ss_pred HHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHHH-hccc----CCCCCCchhHHHHHHHHHHHHHHHHHHHhhccc
Q 022197 35 GYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYL-QGFT----TKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLN 109 (301)
Q Consensus 35 ~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~~-~~~~----~~~~~~p~~~y~~~s~~~~~~~~l~n~aL~yvs 109 (301)
+-+.-.+..+.+.++++|+...++.+.|.++.++.... +..+ ++-+....|+|+++++++..+...+..++||+|
T Consensus 23 sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~ln 102 (314)
T KOG1444|consen 23 SSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLN 102 (314)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccC
Confidence 33444556677778888888888888998877665433 2211 112345667899999999999999999999999
Q ss_pred hHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhhhHHHH
Q 022197 110 YPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQ 189 (301)
Q Consensus 110 ~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~q 189 (301)
+|+++++|+.+++.|++.+..+ +++|+++..|.++..+.+|.......|. .++..|+.++..+++..+...++.
T Consensus 103 Vpm~tv~kn~tii~~ai~E~lf--~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----sf~~~gY~w~~~n~~~~a~~~v~~ 176 (314)
T KOG1444|consen 103 VPMFTVFKNLTIILTAIGEVLF--FGKRPSNKVWASVFAMIIGSVAAAFTDL----SFNLRGYSWALANCLTTAAFVVYV 176 (314)
T ss_pred chHHHHHhhchHHHHHHhHHhh--cCcCchhhHHHHHHHHHHHHHhhccccc----eecchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 7899999999999999999998888775 677889999999999999999999
Q ss_pred HHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 022197 190 EAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCS---QHLYVYGVLVFEAMATFIGQVSVLSLIALFGA 266 (301)
Q Consensus 190 e~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~---~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~ga 266 (301)
++-.+.. +.+.+++|||+|++++|.+....+.+||+. +..+.. ..+.++..+.++|++++.-.++.++|+...||
T Consensus 177 kk~vd~~-~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SA 254 (314)
T KOG1444|consen 177 KKSVDSA-NLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSA 254 (314)
T ss_pred HHhhccc-cccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 8887753 346789999999999999988888899988 555532 22456788999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhc-----ccccccccceeEE
Q 022197 267 ATTAMVNPSHKLEAFPQ-----FHNVNILTCEYAC 296 (301)
Q Consensus 267 lt~svv~t~Rk~~sill-----g~~~~~~~~~G~~ 296 (301)
+|.+++|...|..+.+- +.+.+..+.+|+.
T Consensus 255 tT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll 289 (314)
T KOG1444|consen 255 TTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLL 289 (314)
T ss_pred cceeehhhhhhHHHHHHHHhcCCceechhhhHHHH
Confidence 99999997777777442 6678887777653
No 9
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.91 E-value=4.4e-22 Score=188.17 Aligned_cols=269 Identities=12% Similarity=0.144 Sum_probs=205.8
Q ss_pred hHHHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHH--HHh-cccCCCC----CCchhHHHHHHHHH
Q 022197 22 WQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI--YLQ-GFTTKQM----MNPWKTYVKLSAVL 94 (301)
Q Consensus 22 ~~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~--~~~-~~~~~~~----~~p~~~y~~~s~~~ 94 (301)
.++....+...|..=..+.+...++++. +++|+.++..|+++..++. .+. +.++.++ +..+++.+++++++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4577777777777777778888888754 7889999999987765432 221 2322121 12345567889988
Q ss_pred HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHH
Q 022197 95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIM 174 (301)
Q Consensus 95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~l 174 (301)
......+|.|+++++.++.++.|++.|+.++++++++ ++||++++++++++++++|+++...+|. ++++.|+++
T Consensus 125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~--l~ek~s~~~~l~l~l~v~Gv~l~~~~~~----~~~~~G~~~ 198 (350)
T PTZ00343 125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILF--LKQFLNLYAYLSLIPIVGGVALASVKEL----HFTWLAFWC 198 (350)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHheecccc----hhHHHHHHH
Confidence 7777788999999999999999999999999999999 8999999999999999999999987653 567889999
Q ss_pred HHHHHHHHhhhHHHHHHHHhhCC----CCCHHHHHHHHHHHhHHHHhHHHh-hhc-cHHHHHHH----HHhcc--HHHHH
Q 022197 175 ISGALIMDSFLGNLQEAIFTMNP----ETTQMEMLFCSTVVGLPMLIPPML-LTG-ELFKAWNS----CSQHL--YVYGV 242 (301)
Q Consensus 175 l~~sl~~dg~~~~~qe~l~~~~~----~~~~~e~mfy~~~~~~~~~~~~~~-~~g-el~~~~~f----~~~~p--~~~~~ 242 (301)
.++|.++.++++++.+|++++++ +.++.+...|..+++..+++|... .++ +....+.- ..+.+ .....
T Consensus 199 ~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~ 278 (350)
T PTZ00343 199 AMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFK 278 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHH
Confidence 99999999999999999987542 234555666667777777766654 222 11211110 01111 23335
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 243 LVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 243 l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
++.++++.++-|...|..+++.||+|.++.+++|.+++++. |+++|+.|++|.+++
T Consensus 279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~li 339 (350)
T PTZ00343 279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVA 339 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHH
Confidence 66778888888899999999999999999999999998764 999999999998765
No 10
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.89 E-value=2.2e-21 Score=179.49 Aligned_cols=264 Identities=16% Similarity=0.139 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHHHh---cccCC--CCCCchhHHHHHHHHHHHHHHH
Q 022197 26 LICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQ---GFTTK--QMMNPWKTYVKLSAVLMGSHGL 100 (301)
Q Consensus 26 ~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~~~---~~~~~--~~~~p~~~y~~~s~~~~~~~~l 100 (301)
...+...+..-..+.++++++++ ++++|..+++.|+.+........ +.+++ .++..++..++.+++......+
T Consensus 4 ~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 4 GLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666667777777764 48999999999977665443221 22211 1223455566788888888899
Q ss_pred HHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHH
Q 022197 101 TKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALI 180 (301)
Q Consensus 101 ~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~ 180 (301)
+|.+++|+|.+..++.|+..|+.++++++++ +|||++.++++++++..+|+++...+| .+++..|..+.+++.+
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~--~~e~~~~~~~~~l~l~~~Gv~l~~~~~----~~~~~~G~~~~l~a~~ 155 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFF--LGQEFPSTLWLSLLPIVGGVALASDTE----LSFNWAGFLSAMISNI 155 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHhhhcCCc----ccccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 889999999999999999998875433 2456789999999999
Q ss_pred HHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHH-HHHH----hccH-HHHHHHHHH-HHHHHH
Q 022197 181 MDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAW-NSCS----QHLY-VYGVLVFEA-MATFIG 253 (301)
Q Consensus 181 ~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~-~f~~----~~p~-~~~~l~~~~-l~~~~g 253 (301)
+-+++..+.+|..+++ +.++.+..+|.+.++...++|.....++..... ++.. ..++ .+...+..+ .+....
T Consensus 156 ~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
T TIGR00817 156 TFVSRNIFSKKAMTIK-SLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFY 234 (302)
T ss_pred HHHHHHHHHHHhhccC-CCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Confidence 9999999999988743 245678899999888877776655444322111 1111 1221 222122222 244455
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 254 QVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 254 ~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
+...|..+++.||.+.++.++++.+++++. ||++++.||+|.+++
T Consensus 235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~li 284 (302)
T TIGR00817 235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIA 284 (302)
T ss_pred HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHH
Confidence 667778999999999999999999999654 999999999998765
No 11
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.80 E-value=3.1e-20 Score=164.62 Aligned_cols=182 Identities=15% Similarity=0.167 Sum_probs=141.2
Q ss_pred cchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCC-----------------------C
Q 022197 108 LNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT-----------------------S 164 (301)
Q Consensus 108 vs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~-----------------------~ 164 (301)
+++|.++.+|+++++++|+.++.. .+|||+..||+++.+++.|+....++|.+. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~--~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~ 79 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLA--AGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLM 79 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccc--cceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccc
Confidence 689999999999999999999999 689999999999999999999776665310 1
Q ss_pred CCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhcc------HHHHHHHHHhccH
Q 022197 165 PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGE------LFKAWNSCSQHLY 238 (301)
Q Consensus 165 ~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~ge------l~~~~~f~~~~p~ 238 (301)
....+.|..+++.++++|++.+++||+.+|++ |.++|.+.+++++..+.....++ ......+..++|.
T Consensus 80 ~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (222)
T TIGR00803 80 FGNPVVGLSAVLSALLSSGFAGVYFEKILKDG------DTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPT 153 (222)
T ss_pred cccHHHHHHHHHHHHHHHhhhHHHHHHcccCC------CCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCch
Confidence 12457899999999999999999999987754 23466666666555433222233 3333333444554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEeec
Q 022197 239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVNT 300 (301)
Q Consensus 239 ~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~~ 300 (301)
.. ....++++.++.++..+++++|+.+.++++++||++|.++ ||++++.||.|+.+|+.
T Consensus 154 ~~---~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~ 217 (222)
T TIGR00803 154 AV---WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFL 217 (222)
T ss_pred HH---HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHe
Confidence 32 2334557788999999999999999999999999999764 99999999999988753
No 12
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.77 E-value=2.3e-17 Score=154.02 Aligned_cols=210 Identities=17% Similarity=0.191 Sum_probs=167.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 81 MNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 81 ~~p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
+.|+++|+.+++++..++.+.+.|++|.|+...+++++...+.+|++++++ +|+||++.|++++++..+|+++...+|
T Consensus 76 ~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~f--L~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 76 KRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIF--LKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHH--HHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 478999999999999999999999999999999999999999999999999 999999999999999999999999988
Q ss_pred CCC-----CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHh-hhccHHHHHHHHH
Q 022197 161 AQT-----SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPML-LTGELFKAWNSCS 234 (301)
Q Consensus 161 ~~~-----~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~-~~gel~~~~~f~~ 234 (301)
..+ +.++...|.++++++..+.|+.+++||++.|++ +..|.+-...+++++...+... ++.+-.+.. .
T Consensus 154 ~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~---~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~---~ 227 (334)
T PF06027_consen 154 VLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA---PRVEFLGMLGLFGFIISGIQLAILERSGIESI---H 227 (334)
T ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC---CHHHHHHHHHHHHHHHHHHHHHheehhhhhcc---C
Confidence 532 124567899999999999999999999999864 3567776667777666554432 333222222 2
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 235 QHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 235 ~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
-+++....++.++++.++-....-..++..||+..++-..+-.+.+++. |++++++.++|.++|
T Consensus 228 w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lI 296 (334)
T PF06027_consen 228 WTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALI 296 (334)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHH
Confidence 2445556666677776666666677899999998888887788777654 778888877776544
No 13
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.75 E-value=4.5e-17 Score=146.56 Aligned_cols=209 Identities=15% Similarity=0.201 Sum_probs=156.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC
Q 022197 83 PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ 162 (301)
Q Consensus 83 p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~ 162 (301)
...+++.||++|...+.+.+.+++|++.+++|+.+.+|++.|.++++++ +|||.+.+||+++.++++|+++...++..
T Consensus 16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~--L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLL--LKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHH--HHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 3456889999999999999999999999999999999999999999999 99999999999999999999999997653
Q ss_pred C----C---------CCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhh-ccHHH
Q 022197 163 T----S---------PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLT-GELFK 228 (301)
Q Consensus 163 ~----~---------~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~-gel~~ 228 (301)
+ + ......|+.+++++.+++|+.++++||++|+++ .+.+........++.+..++..... ++-..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~-~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~ 172 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN-VSLWIQNMQLYLFGILFNLLALLLSDGSAIS 172 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 2 0 112468999999999999999999999999864 4444444455666666655443332 22111
Q ss_pred HHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccceeEEEe
Q 022197 229 AWNSCSQ-HLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTCEYACLV 298 (301)
Q Consensus 229 ~~~f~~~-~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~~G~~lv 298 (301)
.-.+++. ++..+.. .+.++.|-+.+-.++|+.|.++=...+.+--++|.+ +|++++....+|..+|
T Consensus 173 ~~g~f~G~~~~~~~~----i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 173 ESGFFHGYSWWVWIV----IFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred cCCchhhcchHHHHH----HHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 1112222 2222332 344566668888899999987755555555544432 3999999999999886
No 14
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.74 E-value=1.6e-17 Score=143.58 Aligned_cols=266 Identities=16% Similarity=0.201 Sum_probs=200.6
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHH-HHhcccC-CCCCCchhHHHHHHHHHH
Q 022197 18 DRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLI-YLQGFTT-KQMMNPWKTYVKLSAVLM 95 (301)
Q Consensus 18 ~~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~-~~~~~~~-~~~~~p~~~y~~~s~~~~ 95 (301)
..+..-.+.-|...|... ...+++.+..+|+-...+.+.|.+++++.. .++..+- +-|....++|++++++..
T Consensus 5 ~s~~~~~lsYc~sSIlmT-----ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv 79 (309)
T COG5070 5 VSELTASLSYCFSSILMT-----LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLV 79 (309)
T ss_pred cccchHHHHHHHHHHHHH-----HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHH
Confidence 334444566666666544 356677888899999999999988886532 2322111 123456778999999988
Q ss_pred HHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCC---CcchHHH
Q 022197 96 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSP---NFSMIGV 172 (301)
Q Consensus 96 ~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~---~~~~~G~ 172 (301)
..+..+..||+|+++|.++++|..++|.+......+ +++|.+..+..+.++|+..-...+.+|..... ..--.|+
T Consensus 80 ~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~--Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY 157 (309)
T COG5070 80 VMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLF--FGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGY 157 (309)
T ss_pred HHHHhcccceeeeeeeHHHHhccceeehhHhhHHHH--hcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCce
Confidence 888899999999999999999999999999999999 88999999999999999999999999863211 1122599
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHh-ccHHHHHHHHHHHHHH
Q 022197 173 IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HLYVYGVLVFEAMATF 251 (301)
Q Consensus 173 ~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~-~p~~~~~l~~~~l~~~ 251 (301)
.++..++.-++..-....+..+-... ..+|.|||+|++++|.++...+..+|..+. +.-.+ .++....+.++++|++
T Consensus 158 ~Wm~~NclssaafVL~mrkri~ltNf-~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl~sv 235 (309)
T COG5070 158 LWMFTNCLSSAAFVLIMRKRIKLTNF-KDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGLCSV 235 (309)
T ss_pred EEEehhhHhHHHHHHHHHHhhccccc-chhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHHHHh
Confidence 99999999888877666555442222 257999999999999998777666665442 11112 3466778889999986
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccc
Q 022197 252 IGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTC 292 (301)
Q Consensus 252 ~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~ 292 (301)
.--++.-+|++.+++.|.+++|.+.|..--+ ++.+.+.+..
T Consensus 236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si 281 (309)
T COG5070 236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSI 281 (309)
T ss_pred hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHH
Confidence 6668889999999999999999999965422 2666665544
No 15
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.57 E-value=4.8e-16 Score=138.13 Aligned_cols=256 Identities=13% Similarity=0.114 Sum_probs=193.5
Q ss_pred HHHHhhhhhcc--CCCCchhHHHHHHHHHHHHHHH-Hh----cc----cCCC---CCCchhHHHHHHHHHHHHHHHHHHH
Q 022197 39 NGVCEEYVYNR--LQFSYGWYFTFIQGFVYLVLIY-LQ----GF----TTKQ---MMNPWKTYVKLSAVLMGSHGLTKGS 104 (301)
Q Consensus 39 ~g~~qE~i~~~--~~f~~~~~lt~~q~l~~~~~~~-~~----~~----~~~~---~~~p~~~y~~~s~~~~~~~~l~n~a 104 (301)
..++.+++++. ..-+.|.+.|..||++...++. +. +. .-++ +-...|+..+.++.+...+..+|..
T Consensus 43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlc 122 (347)
T KOG1442|consen 43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLC 122 (347)
T ss_pred hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhcccee
Confidence 34555666654 3457899999999998765432 21 11 1111 1234456678899999999999999
Q ss_pred hhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhh
Q 022197 105 LAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSF 184 (301)
Q Consensus 105 L~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~ 184 (301)
|+|++++++.+.||.+.+++.+.++++ +|+|-+..-..++.++..|-. ++.+....+...++.|.+.-+.|.++-|+
T Consensus 123 L~yVgVaFYyvgRsLttvFtVlLtyvl--lkqkTs~~~~~~C~lIi~GF~-lGvdqE~~~~~ls~~GvifGVlaSl~vAl 199 (347)
T KOG1442|consen 123 LKYVGVAFYYVGRSLTTVFTVLLTYVL--LKQKTSFFALGCCLLIILGFG-LGVDQEGSTGTLSWIGVIFGVLASLAVAL 199 (347)
T ss_pred hhhcceEEEEeccchhhhHHHHhHHhh--cccccccccceeehhheehhe-eccccccccCccchhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999 889888888888777777744 22222123346678999999999999999
Q ss_pred hHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022197 185 LGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HLYVYGVLVFEAMATFIGQVSVLSLIAL 263 (301)
Q Consensus 185 ~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~-~p~~~~~l~~~~l~~~~g~~~i~~~i~~ 263 (301)
.+++..|..-.-+. ..+..-+|+|..++.+++|.+++.||+.+-+.|... ...+|..+.+++++|+.-++....=+|.
T Consensus 200 naiytkk~l~~v~~-~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~ 278 (347)
T KOG1442|consen 200 NAIYTKKVLPPVGD-CIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKV 278 (347)
T ss_pred HHHhhheecccccC-eehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEe
Confidence 99998865543222 245667899999999999999999999876654222 2246778889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 264 FGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 264 ~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
+||+|-++-+|.|...-.++ ++.-+..-|-|-.+|
T Consensus 279 TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~v 318 (347)
T KOG1442|consen 279 TSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVV 318 (347)
T ss_pred cccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEE
Confidence 99999999999998765332 777777777776555
No 16
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.46 E-value=4e-13 Score=111.67 Aligned_cols=128 Identities=13% Similarity=0.179 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhC----CCCCHHHHHHHHHHHhHHHHhHHHhhhccHH--HHHHHHHh-----ccHH
Q 022197 171 GVIMISGALIMDSFLGNLQEAIFTMN----PETTQMEMLFCSTVVGLPMLIPPMLLTGELF--KAWNSCSQ-----HLYV 239 (301)
Q Consensus 171 G~~ll~~sl~~dg~~~~~qe~l~~~~----~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~--~~~~f~~~-----~p~~ 239 (301)
|+++.+.|.+++|++++++|+++++. ++.++.++++|+++.+.+.+++..+..++.. +...-..+ .++.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999999874 4567999999999999999888876655543 11111111 3466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 240 YGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 240 ~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
+..++.+++.+++.|++.|.+++++||+|.++++++|++++++. |+++|+.++.|+++.
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~ 144 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLA 144 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHH
Confidence 77788899999999999999999999999999999999988664 999999999998653
No 17
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.45 E-value=5.2e-12 Score=113.75 Aligned_cols=233 Identities=12% Similarity=0.076 Sum_probs=165.5
Q ss_pred CchhHHHHHHHHHHHHHHH-HhcccCCCCCCchhHHHHHHH-HHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhh
Q 022197 53 SYGWYFTFIQGFVYLVLIY-LQGFTTKQMMNPWKTYVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAF 130 (301)
Q Consensus 53 ~~~~~lt~~q~l~~~~~~~-~~~~~~~~~~~p~~~y~~~s~-~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l 130 (301)
..+....+...+....... ....+ +++.+++.+...+. .......+-+.|++|++.+...+..+..|+.+++++.+
T Consensus 16 ~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l 93 (260)
T TIGR00950 16 VPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDL 93 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHH
Confidence 3455666666544433221 11112 22224444555543 45667778899999999999999999999999999999
Q ss_pred ccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHH
Q 022197 131 IPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTV 210 (301)
Q Consensus 131 ~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~ 210 (301)
+ +|||.+++|+.++.+...|+.+...++. .+.+..|+.+.+++.++-+..+.++++..++.+. ++.....+...
T Consensus 94 ~--~~e~~~~~~~~gi~i~~~Gv~li~~~~~---~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~ 167 (260)
T TIGR00950 94 M--GKERPRKLVLLAAVLGLAGAVLLLSDGN---LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP-ELLQFTGWVLL 167 (260)
T ss_pred H--ccCCCcHHHHHHHHHHHHhHHhhccCCc---ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc-hHHHHHHHHHH
Confidence 9 7899999999999999999988764431 2345789999999999999999999988765432 23333334556
Q ss_pred HhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHH-HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----c
Q 022197 211 VGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLV-FEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----F 284 (301)
Q Consensus 211 ~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~-~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g 284 (301)
++.+.+.+.....++-.. .++..+..++ ...++..+++.+.+..+++.++-+.++...+...++.++ |
T Consensus 168 ~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~ 241 (260)
T TIGR00950 168 LGALLLLPFAWFLGPNPQ------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILG 241 (260)
T ss_pred HHHHHHHHHHHhcCCCCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhC
Confidence 666655555444433211 0222333333 434455788889999999999999999999999988664 9
Q ss_pred cccccccceeEEEee
Q 022197 285 HNVNILTCEYACLVN 299 (301)
Q Consensus 285 ~~~~~~~~~G~~lv~ 299 (301)
|++++.+|+|.+++.
T Consensus 242 E~~~~~~~~G~~li~ 256 (260)
T TIGR00950 242 ETLSLPQLIGGALII 256 (260)
T ss_pred CCCCHHHHHHHHHHH
Confidence 999999999987654
No 18
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.41 E-value=1.8e-12 Score=119.73 Aligned_cols=209 Identities=17% Similarity=0.172 Sum_probs=151.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC-
Q 022197 84 WKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ- 162 (301)
Q Consensus 84 ~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~- 162 (301)
..+...++++|...+.+...++.+++-.++++.-..|+..|.++.+++ ++||.+++||.+.+++.+|+++..++..+
T Consensus 92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~--L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~ 169 (345)
T KOG2234|consen 92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLI--LRRKLSRLQWMALVLLFAGVALVQLPSLSP 169 (345)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence 344667899999999999999999999999999999999999999999 99999999999999999999999954321
Q ss_pred --C----CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhc-cHHHHHHHHHh
Q 022197 163 --T----SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTG-ELFKAWNSCSQ 235 (301)
Q Consensus 163 --~----~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~g-el~~~~~f~~~ 235 (301)
+ ...+.+.|+..++.+++++|+.++|-||++|+.+ .+-+-.......++.++.+..++.++ |-...-.|++.
T Consensus 170 ~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~-~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G 248 (345)
T KOG2234|consen 170 TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN-VSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYG 248 (345)
T ss_pred CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccc
Confidence 1 1245678999999999999999999999999754 44333333555666666665554432 21112334455
Q ss_pred ccH-HHHHHHHHHHHHHHHHHHHHHHHhhhhHHH----HHHHHHHHHHhhhhc-ccccccccceeEEEee
Q 022197 236 HLY-VYGVLVFEAMATFIGQVSVLSLIALFGAAT----TAMVNPSHKLEAFPQ-FHNVNILTCEYACLVN 299 (301)
Q Consensus 236 ~p~-~~~~l~~~~l~~~~g~~~i~~~i~~~galt----~svv~t~Rk~~sill-g~~~~~~~~~G~~lv~ 299 (301)
+.. .|..++.++ +|-+.+-.++|+-+... .++...+--+.|+.+ ++++|....+|+.+|.
T Consensus 249 ~s~~vw~vVl~~a----~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi 314 (345)
T KOG2234|consen 249 YSSIVWLVVLLNA----VGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVI 314 (345)
T ss_pred ccHHHHHHHHHHh----ccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHH
Confidence 443 344444544 44466666666666544 233333344555444 8999998888887765
No 19
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.22 E-value=6.2e-09 Score=96.31 Aligned_cols=258 Identities=12% Similarity=0.141 Sum_probs=160.5
Q ss_pred HHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHHHhcccCCCCCCchhHHHHHHHH-HHHHHHHHHHHhhc-cc
Q 022197 32 FFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAV-LMGSHGLTKGSLAF-LN 109 (301)
Q Consensus 32 i~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~~~~~~~~~~~~p~~~y~~~s~~-~~~~~~l~n~aL~y-vs 109 (301)
....+.......+...+ + -.|..+++.-++..........+++ +.+++.....+.. ......+...+++| ++
T Consensus 12 ~~~~Wg~~~~~~k~~~~--~-~~p~~~~~~R~~~a~~~l~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 85 (299)
T PRK11453 12 VVVVWGLNFVVIKVGLH--N-MPPLMLAGLRFMLVAFPAIFFVARP---KVPLNLLLGYGLTISFGQFAFLFCAINFGMP 85 (299)
T ss_pred HHHHHhhhHHHHHHHHh--c-CCHHHHHHHHHHHHHHHHHHHhcCC---CCchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34444444444443331 2 3467777777554332221111221 2233433333432 22333456778888 78
Q ss_pred hHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhhhHHHH
Q 022197 110 YPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQ 189 (301)
Q Consensus 110 ~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~q 189 (301)
-..-.++-++.|+.++++++++ +|||.+.++++++++..+|+.+...++.++ .+.+..|..+.+++.++-+....++
T Consensus 86 a~~a~~l~~~~pi~~~ll~~~~--l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-~~~~~~G~~l~l~aal~~a~~~v~~ 162 (299)
T PRK11453 86 AGLASLVLQAQAFFTIVLGAFT--FGERLQGKQLAGIALAIFGVLVLIEDSLNG-QHVAMLGFMLTLAAAFSWACGNIFN 162 (299)
T ss_pred HHHHHHHHHhHHHHHHHHHHHH--hcCcCcHHHHHHHHHHHHhHHHhccccCCC-cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 8788888899999999999999 899999999999999999998876543221 2334579999999999999999999
Q ss_pred HHHHhhCCCCCHHHHHHHHHHHh-HHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH-HHHHHHHHHHHHHHhhhhHH
Q 022197 190 EAIFTMNPETTQMEMLFCSTVVG-LPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA-MATFIGQVSVLSLIALFGAA 267 (301)
Q Consensus 190 e~l~~~~~~~~~~e~mfy~~~~~-~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~-l~~~~g~~~i~~~i~~~gal 267 (301)
+|..++++........++...++ .|........+++......+..-++..+..++..+ +++.++...-+..+++.++-
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~ 242 (299)
T PRK11453 163 KKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETW 242 (299)
T ss_pred HHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 99865432222223334444433 33332222223322111111112333344343333 44455566667788999999
Q ss_pred HHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 268 TTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 268 t~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
+.+.+..+--+++.+. ||+++..+|+|.+++
T Consensus 243 ~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI 278 (299)
T PRK11453 243 RVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLI 278 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 9999998888877553 999999999998765
No 20
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.20 E-value=2.4e-09 Score=98.96 Aligned_cols=233 Identities=11% Similarity=-0.083 Sum_probs=153.3
Q ss_pred chhHHHHHHHHHHHHHHHHhcccCCCCCCchhHHHHHHHHHHHHHHHHHHHhhcc----chHHHHHHhhccchhhhhhhh
Q 022197 54 YGWYFTFIQGFVYLVLIYLQGFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFL----NYPAQLMFKSTKVLPVMVMGA 129 (301)
Q Consensus 54 ~~~~lt~~q~l~~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~~~~~l~n~aL~yv----s~p~~~v~Ks~k~i~vml~~~ 129 (301)
.|..+.+.-+.....+...-..+++.++.+++....-++.......+.+.+++|. +-..-.+.-+..|+.++++++
T Consensus 31 ~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~ 110 (295)
T PRK11689 31 GPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAV 110 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHH
Confidence 4566666664444333221111222222333333333444555566677777663 444446778889999999999
Q ss_pred hccccccccCcchhhHHhHHHHHhhheeccCCCC-------CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHH
Q 022197 130 FIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT-------SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQM 202 (301)
Q Consensus 130 l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~-------~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~ 202 (301)
++ +|||.++++++++++-.+|+.+...++... +..++..|..+.+.+.++-|..+++.+|..+++ ++.
T Consensus 111 ~~--~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~---~~~ 185 (295)
T PRK11689 111 LF--NGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK---NGI 185 (295)
T ss_pred HH--hcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC---Cch
Confidence 99 789999999999999999998877554211 012345799999999999999999999986543 233
Q ss_pred HHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh
Q 022197 203 EMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFP 282 (301)
Q Consensus 203 e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sil 282 (301)
...+. ..+. .+.+....+++... .-+++.+..++..++.+.+++.+-+..+++.+|...++...+--+++++
T Consensus 186 ~~~~~--~~~~-~l~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i 257 (295)
T PRK11689 186 TLFFI--LTAL-ALWIKYFLSPQPAM-----VFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAA 257 (295)
T ss_pred hHHHH--HHHH-HHHHHHHHhcCccc-----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHH
Confidence 32221 1122 22221122222111 1133445555566677788899999999999999999999999998866
Q ss_pred c-----ccccccccceeEEEee
Q 022197 283 Q-----FHNVNILTCEYACLVN 299 (301)
Q Consensus 283 l-----g~~~~~~~~~G~~lv~ 299 (301)
+ ||.+++.+|+|.+++.
T Consensus 258 ~~~~~lgE~~~~~~~iG~~lI~ 279 (295)
T PRK11689 258 LAALLLSTPLSFSFWQGVAMVT 279 (295)
T ss_pred HHHHHhCCCCcHHHHHHHHHHH
Confidence 4 9999999999987754
No 21
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.12 E-value=8.6e-09 Score=97.90 Aligned_cols=270 Identities=12% Similarity=0.033 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHH-HHH---HHhcccCCCCCCchhH---HHHHHHHHHH
Q 022197 24 QFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYL-VLI---YLQGFTTKQMMNPWKT---YVKLSAVLMG 96 (301)
Q Consensus 24 ~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~-~~~---~~~~~~~~~~~~p~~~---y~~~s~~~~~ 96 (301)
+.-..-..+..+|..+..+-...+ +.+.+. ..+.+.=+.... ++. ..+.++++.++.++++ +...+++-..
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~-~~G~~~-~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~ 90 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVAT-SKGLNI-YPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSM 90 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH-HCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHH
Confidence 344444556667766666666555 333322 123333323322 221 1221111112223444 3344444333
Q ss_pred HHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccc----cccccCcchhhHHhHHHHHhhheeccCCC----------
Q 022197 97 SHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPG----LRRKYPAHEYVSALLLVVGLILFTLADAQ---------- 162 (301)
Q Consensus 97 ~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~g----l~kry~~~~~~~v~~i~~Gv~lf~~~~~~---------- 162 (301)
...+.+.+++|+|-..-.++-+..|+.+++++.++.- ++||.+.++++++++-.+|+.+....+..
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~ 170 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY 170 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence 4457899999999999999999999999999999810 17999999999999999998865432110
Q ss_pred ----------CCCCc-chHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHH-HHhHHHHhHHHhhhccHHHHH
Q 022197 163 ----------TSPNF-SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCST-VVGLPMLIPPMLLTGELFKAW 230 (301)
Q Consensus 163 ----------~~~~~-~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~-~~~~~~~~~~~~~~gel~~~~ 230 (301)
...+. .+.|..+++.|.++=|+..+.|+|..++++. +....++.. ..+++...+....+++-...+
T Consensus 171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~--~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~ 248 (358)
T PLN00411 171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA--AFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW 248 (358)
T ss_pred ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc--HhHHHHHHHHHHHHHHHHHHHHHccCCcccc
Confidence 00112 3569999999999999999999999887642 333333333 334444444433333211111
Q ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEee
Q 022197 231 NSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVN 299 (301)
Q Consensus 231 ~f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~ 299 (301)
. ..-++..+. ++..++...++..+-++.+++.||...++...+--++++++ ||++++.+++|.+++.
T Consensus 249 ~-~~~~~~~~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl 320 (358)
T PLN00411 249 I-IHFDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILIT 320 (358)
T ss_pred e-eccchHHHH-HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 0 001122222 22223334456677788999999999999999999888654 9999999999987653
No 22
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.10 E-value=8.5e-09 Score=92.60 Aligned_cols=210 Identities=13% Similarity=0.157 Sum_probs=157.8
Q ss_pred chhH--HHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 83 PWKT--YVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 83 p~~~--y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
|++. +++++++....+.+-|.+|.+-+-+-+||.|.+-+|+|-+++.-+ ++++...+||+++..++.|+++..+.|
T Consensus 83 pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~--Ln~ti~~~qWl~i~fv~lGlviVg~~d 160 (372)
T KOG3912|consen 83 PFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMF--LNRTITGRQWLGILFVSLGLVIVGSLD 160 (372)
T ss_pred CCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHH--HhcccchhhHHHHHHHHhhhheeeeee
Confidence 5544 567999999999999999999999999999999999999999999 999999999999999999999999876
Q ss_pred CC--CC----CCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHH--------HhHHHHhHHHh-----
Q 022197 161 AQ--TS----PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTV--------VGLPMLIPPML----- 221 (301)
Q Consensus 161 ~~--~~----~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~--------~~~~~~~~~~~----- 221 (301)
.- +. .+.-..|..+++.+.+.-|++-+++||.+++++ .+|.+..=|-.. ++.|......-
T Consensus 161 ~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~n-V~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~ 239 (372)
T KOG3912|consen 161 VHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSN-VAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC 239 (372)
T ss_pred cccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhcc-CCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence 41 11 133467999999999999999999999999874 345544433333 33333221110
Q ss_pred -hhc---cHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhh----hhccc-ccccccc
Q 022197 222 -LTG---ELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEA----FPQFH-NVNILTC 292 (301)
Q Consensus 222 -~~g---el~~~~~f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~s----illg~-~~~~~~~ 292 (301)
..| |..+++.-+.+.|.....+..+.++-+.-|+.-..++|+-||.|=.+.-.+|..+- +..|+ .+..+|.
T Consensus 240 ~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqi 319 (372)
T KOG3912|consen 240 NPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQI 319 (372)
T ss_pred CCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHH
Confidence 112 45566777788887665555555555666777788999999999999999998553 44443 4555665
Q ss_pred eeE
Q 022197 293 EYA 295 (301)
Q Consensus 293 ~G~ 295 (301)
.|.
T Consensus 320 lGF 322 (372)
T KOG3912|consen 320 LGF 322 (372)
T ss_pred HHH
Confidence 553
No 23
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.07 E-value=3.9e-08 Score=90.68 Aligned_cols=259 Identities=11% Similarity=0.030 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHH--HHHhcccCC-CCCCchhHHHHHHHHH-HHHHH
Q 022197 24 QFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL--IYLQGFTTK-QMMNPWKTYVKLSAVL-MGSHG 99 (301)
Q Consensus 24 ~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~--~~~~~~~~~-~~~~p~~~y~~~s~~~-~~~~~ 99 (301)
.+..+...+...+.+.+..-.... +.-.|..+++..++..... ......+.+ +++..++.....+.+. .....
T Consensus 8 ~~~~~~~~~~~iWg~~~~~~K~~~---~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 8 PLFGALFALYIIWGSTYLVIRIGV---ESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 344455444555555555433322 1235677777775544322 222111111 1122333344455443 34556
Q ss_pred HHHHHh-hccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHH
Q 022197 100 LTKGSL-AFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGA 178 (301)
Q Consensus 100 l~n~aL-~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~s 178 (301)
+-+.+. ++++...-.+.-+..|+.+++++.+ +|||.+++++.++++-.+|+.+...++. .+.+..|..+.+++
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~---~~e~~~~~~~~~~~la~~Gv~ll~~~~~---~~~~~~G~l~~l~a 158 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL---FGIRTRKLEWLGIAIGLAGIVLLNSGGN---LSGNPWGAILILIA 158 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH---hcccCchhHHHHHHHHHHhHHHHhcCcc---cccchHHHHHHHHH
Confidence 778888 9999999999999999999999975 4799999999999999999988754321 13456799999999
Q ss_pred HHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH-HHHHHHHHHH
Q 022197 179 LIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA-MATFIGQVSV 257 (301)
Q Consensus 179 l~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~-l~~~~g~~~i 257 (301)
.++-|..+..++|..+++ + .....+...++.+.+.+.....++.... ..+++.+..+...+ +++.++....
T Consensus 159 ~~~~a~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~l~i~~s~~~~~l~ 230 (292)
T PRK11272 159 SASWAFGSVWSSRLPLPV---G-MMAGAAEMLAAGVVLLIASLLSGERLTA----LPTLSGFLALGYLAVFGSIIAISAY 230 (292)
T ss_pred HHHHHHHHHHHHhcCCCc---c-hHHHHHHHHHHHHHHHHHHHHcCCcccc----cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988864321 2 2233344444444443333333321110 01223333333333 3456777888
Q ss_pred HHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEee
Q 022197 258 LSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVN 299 (301)
Q Consensus 258 ~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~ 299 (301)
+..+++.++-+.++...+.-+++.+. ||++++.+|+|.+++.
T Consensus 231 ~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi 277 (292)
T PRK11272 231 MYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIV 277 (292)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 89999999999999999999888654 9999999999987653
No 24
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.02 E-value=8.7e-08 Score=86.66 Aligned_cols=195 Identities=13% Similarity=0.093 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhh-hccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcc
Q 022197 90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGA-FIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 168 (301)
Q Consensus 90 ~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~-l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~ 168 (301)
..+.......+-+.+++|++.+..++..++.|+.+.+++. ++ ++||.+++++.+++....|+.+....+.....+ .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~-~ 152 (292)
T COG0697 76 ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL--LGERLSLLQILGILLALAGVLLILLGGGGGGIL-S 152 (292)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--ccCCCcHHHHHHHHHHHHhHHheecCCCcchhH-H
Confidence 3455666677888899999999999999999999999996 66 589999999999999999999998876532111 4
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHH-HHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH
Q 022197 169 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLF-CSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA 247 (301)
Q Consensus 169 ~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mf-y~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~ 247 (301)
..|..+.+++.++.|+....++++. +. ++....+ +... ........... .+.. .......+..+...+
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~g 221 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-RL---GPVTLALLLQLL-LALLLLLLFFL-SGFG-----APILSRAWLLLLYLG 221 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CC---ChHHHHHHHHHH-HHHHHHHHHHh-cccc-----ccCCHHHHHHHHHHH
Confidence 6899999999999999999999887 32 2333333 2211 11111111011 1100 001112233333334
Q ss_pred HHHH-HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 248 MATF-IGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 248 l~~~-~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
+.+. +++.+.+...++.++...+....+..+.+++. ||+++..+|+|.+++
T Consensus 222 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li 278 (292)
T COG0697 222 VFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALV 278 (292)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 4333 68899999999999999999888888777653 999999999997554
No 25
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.97 E-value=6.6e-08 Score=89.39 Aligned_cols=191 Identities=11% Similarity=0.066 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchH
Q 022197 91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI 170 (301)
Q Consensus 91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~ 170 (301)
+........+.++|++|+|...-.+.-.+.|+.++++++++ +|||.++++++++++-..|+++....+. +..
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~--l~E~~~~~~~~g~~l~~~Gv~li~~~~~----~~~-- 151 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF--LGERFRRMQWLAVILAICGVLVQLWTFG----SLP-- 151 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHcC----Ccc--
Confidence 45566678899999999999999999999999999999999 8999999999999999999987653221 111
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHH-HHHHHHHHHH
Q 022197 171 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYV-YGVLVFEAMA 249 (301)
Q Consensus 171 G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~-~~~l~~~~l~ 249 (301)
.+.+++.++-|+...+++|..++. ..+......+..+++.+...+. ..... . ....+|.. +..+...++.
T Consensus 152 --~~~l~aa~~~a~~~i~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~---~~~~~~~~~~~~~~~~g~~ 222 (296)
T PRK15430 152 --IIALGLAFSFAFYGLVRKKIAVEA-QTGMLIETMWLLPVAAIYLFAI--ADSST-S---HMGQNPMSLNLLLIAAGIV 222 (296)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHHHHHHHH--ccCCc-c---cccCCcHHHHHHHHHHHHH
Confidence 346667788888888877754321 1111222223333333222111 11111 0 01122321 2334444556
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 250 TFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 250 ~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
+.+++.+.+..+++.||-..+....+.-.++++. ||.+++.||+|.+++
T Consensus 223 t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI 276 (296)
T PRK15430 223 TTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI 276 (296)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 7789999999999999999999999999888654 999999999998766
No 26
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=98.87 E-value=2.4e-09 Score=99.53 Aligned_cols=205 Identities=11% Similarity=0.149 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCC----CCC
Q 022197 91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQT----SPN 166 (301)
Q Consensus 91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~----~~~ 166 (301)
..+-+.+....|.||+|-++...++.-|.+=.+|..++.++ ..+|+++.|.+++++-.+|+++.+.+|++. .+.
T Consensus 166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if--~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~ 243 (416)
T KOG2765|consen 166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIF--PVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPAS 243 (416)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHc--CcchhhHHHHHHHHHhhccEEEEEeccccccccCCcc
Confidence 44567788899999999999999999999999999999999 469999999999999999999999998732 234
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHHHhhCC-CCCHHHHHH-HHHHHhHHHHhHHHhhhccHH-HHHHHHHhccHHHHHH
Q 022197 167 FSMIGVIMISGALIMDSFLGNLQEAIFTMNP-ETTQMEMLF-CSTVVGLPMLIPPMLLTGELF-KAWNSCSQHLYVYGVL 243 (301)
Q Consensus 167 ~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~-~~~~~e~mf-y~~~~~~~~~~~~~~~~gel~-~~~~f~~~~p~~~~~l 243 (301)
....|-++.+++.++.|++.++-.|-..+++ +.+ +.++| |..++.+.++.|.+++-.-+. +.++ +.+.+.+...+
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvd-i~lffGfvGLfnllllwP~l~iL~~~~~e~F~-lP~~~q~~~vv 321 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVD-IQLFFGFVGLFNLLLLWPPLIILDFFGEERFE-LPSSTQFSLVV 321 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhccccccccc-HHHHHHHHHHHHHHHHhHHHHHHHHhccCccc-CCCCceeEeee
Confidence 5689999999999999999998776655553 443 55665 677888877776654322111 1110 01111222223
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccceeEEEee
Q 022197 244 VFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTCEYACLVN 299 (301)
Q Consensus 244 ~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~~G~~lv~ 299 (301)
+.+++..++.-++=-.-.-.++||+.++-.++.-=++++ .|++.|+.+++|...|+
T Consensus 322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~If 382 (416)
T KOG2765|consen 322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIF 382 (416)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 333333344444444555567788777777665544433 39999999998876543
No 27
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.86 E-value=5e-08 Score=89.43 Aligned_cols=197 Identities=11% Similarity=0.008 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchH
Q 022197 91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMI 170 (301)
Q Consensus 91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~ 170 (301)
+........+-+.+++|.+...-..+-...|+.+.++++++ +|||.++++++++.+...|+.+....+.+ +.+..
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~--~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~---~~~~~ 144 (281)
T TIGR03340 70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT--LGETLSPLAWLGILIITLGLLVLGLSRFA---QHRRK 144 (281)
T ss_pred HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHhccccc---ccchh
Confidence 33456667788999999999999999999999999999999 88999999999999999999877654321 23457
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHH---HHHh-HHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHH
Q 022197 171 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCS---TVVG-LPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFE 246 (301)
Q Consensus 171 G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~---~~~~-~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~ 246 (301)
|..+.+++.++-+......++..++.++. .....+. .... .|+.... ...++.. . ....+..+..+...
T Consensus 145 g~~~~l~aal~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~--~~~~~~~~~~~~~~ 217 (281)
T TIGR03340 145 AYAWALAAALGTAIYSLSDKAAALGVPAF--YSALGYLGIGFLAMGWPFLLLY-LKRHGRS--M--FPYARQILPSATLG 217 (281)
T ss_pred HHHHHHHHHHHHHHhhhhccccccchhcc--cccHHHHHHHHHHHHHHHHHHH-HHHhccc--h--hhhHHHHHHHHHHH
Confidence 88888888888888887655543322111 1122221 1111 2322211 1111110 0 01111223344555
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhh-----cccccccccceeEEEee
Q 022197 247 AMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFP-----QFHNVNILTCEYACLVN 299 (301)
Q Consensus 247 ~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sil-----lg~~~~~~~~~G~~lv~ 299 (301)
.+++.+++.+.+..+++.++-..+....+--+++++ +||+++..+|+|.+++.
T Consensus 218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil 275 (281)
T TIGR03340 218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIV 275 (281)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 667778888888999999986666655555555543 39999999999987653
No 28
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.86 E-value=5.3e-07 Score=83.24 Aligned_cols=260 Identities=10% Similarity=0.018 Sum_probs=155.7
Q ss_pred CCCchhHHHHHHHHHHHHHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHH--HhcccCCCCCCchhHHHHHHHHH
Q 022197 17 TDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVLIY--LQGFTTKQMMNPWKTYVKLSAVL 94 (301)
Q Consensus 17 ~~~~~~~~~~~~~~gi~~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~~~--~~~~~~~~~~~p~~~y~~~s~~~ 94 (301)
.+.|++.-....+.+....- ..+...+...+. . .|..+.+..++....... .+..+.+.++..++.....+.+.
T Consensus 6 ~~~~~~~~~~~~~la~~~~~-~~~~~~K~~~~~--~-~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (293)
T PRK10532 6 RKLPVWLPILLLLIAMASIQ-SGASLAKSLFPL--V-GAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSL 81 (293)
T ss_pred cccccchHHHHHHHHHHHHH-hhHHHHHHHHHH--c-CHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHH
Confidence 34444444444444444333 334444444322 2 345577777555443221 11111111122233344556666
Q ss_pred HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcchHHHHH
Q 022197 95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSMIGVIM 174 (301)
Q Consensus 95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~l 174 (301)
.....+.+++++|+|.....+.-.+.|+.+++++ +||....++ +.+...|+.+....+.+ ..+.+..|..+
T Consensus 82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~------~~~~~~~~~--~~i~~~Gv~li~~~~~~-~~~~~~~G~ll 152 (293)
T PRK10532 82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS------SRRPVDFVW--VVLAVLGLWFLLPLGQD-VSHVDLTGAAL 152 (293)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh------cCChHHHHH--HHHHHHHHheeeecCCC-cccCChHHHHH
Confidence 6677788899999999999899999999888665 244444444 44556787765432211 12345689999
Q ss_pred HHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHH-HHHHHHHHHH
Q 022197 175 ISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVL-VFEAMATFIG 253 (301)
Q Consensus 175 l~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l-~~~~l~~~~g 253 (301)
.+.+.++-|......+|..++++ +... .+...++...+.+.....++.. ..++..+..+ .+-.+++.++
T Consensus 153 ~l~aa~~~a~~~v~~r~~~~~~~---~~~~-~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 153 ALGAGACWAIYILSGQRAGAEHG---PATV-AIGSLIAALIFVPIGALQAGEA------LWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC---chHH-HHHHHHHHHHHHHHHHHccCcc------cCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988865542 3333 3444444444433333322100 0122333222 2333444555
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEee
Q 022197 254 QVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLVN 299 (301)
Q Consensus 254 ~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv~ 299 (301)
....+..+++.+|-..++...+--+++.+. ||++++.||+|.+++.
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl 273 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAII 273 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 667789999999999999999999888654 9999999999987753
No 29
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.85 E-value=1.7e-10 Score=102.12 Aligned_cols=208 Identities=13% Similarity=0.177 Sum_probs=153.1
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHh
Q 022197 74 GFTTKQMMNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGL 153 (301)
Q Consensus 74 ~~~~~~~~~p~~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv 153 (301)
.+|.+.-+..||.|..+++...-++.+--.|.+|-|....+++.|-..+.+++.+|++ ++.||.+.|+..|....+|+
T Consensus 68 ~fR~~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~f--LktrYrlmki~gV~iCi~Gv 145 (336)
T KOG2766|consen 68 LFRRKYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFF--LKTRYRLMKISGVVICIVGV 145 (336)
T ss_pred HhhhHHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHH--HHHHHhhheeeeEEeEecce
Confidence 3444444578899999998888887777789999999999999999999999999999 99999999999999999999
Q ss_pred hheeccCCCC----CCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHH
Q 022197 154 ILFTLADAQT----SPNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKA 229 (301)
Q Consensus 154 ~lf~~~~~~~----~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~ 229 (301)
++...+|.-+ ..++...|-+++++..-+.|+.++.||.+.|+- +..|.|-...+++.+...+-.+.+..-...
T Consensus 146 vmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~---d~~elm~~lgLfGaIIsaIQ~i~~~~~~~t 222 (336)
T KOG2766|consen 146 VMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA---DRVELMGFLGLFGAIISAIQFIFERHHVST 222 (336)
T ss_pred EEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC---cHHHHHHHHHHHHHHHHHHHHhhhccceee
Confidence 9998887521 134556799999999999999999999999853 467888666666554443222221111111
Q ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc---ccccccc
Q 022197 230 WNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ---FHNVNIL 290 (301)
Q Consensus 230 ~~f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill---g~~~~~~ 290 (301)
++ .+.++...+ .+.++-++.-...=.+++..||...++-..+.++-+++. |.++..+
T Consensus 223 l~---w~~~i~~yl-~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i~~FgYhv~wL 282 (336)
T KOG2766|consen 223 LH---WDSAIFLYL-RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLIRTFGYHVDWL 282 (336)
T ss_pred Ee---ehHHHHHHH-HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHHHHHhcchhhh
Confidence 11 112233333 356666666666667889999988888877888888664 7776544
No 30
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.48 E-value=4.5e-05 Score=68.80 Aligned_cols=177 Identities=9% Similarity=0.018 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcc
Q 022197 89 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 168 (301)
Q Consensus 89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~ 168 (301)
..+........+-++|++|++...-.+.-.+.|+.+++++.++ +|||.++++++++++-..|+++...++. +..
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~--l~Ek~~~~~~l~~~~~~~Gv~li~~~~~----~~~ 148 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVF--LKERISRFQFIAVIIATLGVISNIVLKG----SLP 148 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHcC----Cch
Confidence 3455567777899999999999999999999999999999999 8999999999999999999987644321 111
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhcc-HHHHHHHHHH
Q 022197 169 MIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHL-YVYGVLVFEA 247 (301)
Q Consensus 169 ~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p-~~~~~l~~~~ 247 (301)
.+.+++.++-+.....++|..+++ ..+.... +....|...+..+..+... . . ..++ ..+..++..+
T Consensus 149 ----~~~l~aa~~~a~~~i~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~-~-~--~~~~~~~~~~l~~~g 215 (256)
T TIGR00688 149 ----WEALVLAFSFTAYGLIRKALKNTD----LAGFCLE-TLSLMPVAIYYLLQTDFAT-V-Q--QTNPFPIWLLLVLAG 215 (256)
T ss_pred ----HHHHHHHHHHHHHHHHHhhcCCCC----cchHHHH-HHHHHHHHHHHHHHhccCc-c-c--ccCchhHHHHHHHHH
Confidence 245677888888888887764321 2222222 2333333332211111110 0 0 0122 2345555556
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhcc
Q 022197 248 MATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQF 284 (301)
Q Consensus 248 l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sillg 284 (301)
+.+.+++.+.+.-.++.+|-+.+....+--++++++|
T Consensus 216 ~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~ 252 (256)
T TIGR00688 216 LITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCV 252 (256)
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 6778899999999999999999999999888876653
No 31
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.15 E-value=0.00035 Score=64.55 Aligned_cols=190 Identities=11% Similarity=0.064 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHhh-ccchhhhhhhhhccccccccCcch----hhHHhHHHHHhhheeccCCCCCC-
Q 022197 92 AVLMGSHGLTKGSLAFLNYPAQLMFKS-TKVLPVMVMGAFIPGLRRKYPAHE----YVSALLLVVGLILFTLADAQTSP- 165 (301)
Q Consensus 92 ~~~~~~~~l~n~aL~yvs~p~~~v~Ks-~k~i~vml~~~l~~gl~kry~~~~----~~~v~~i~~Gv~lf~~~~~~~~~- 165 (301)
........+...|.+|+++++-..+-+ ..++.+.+.+.++ +|||.+.++ +++++++..|+++....+.++..
T Consensus 67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~--f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~ 144 (290)
T TIGR00776 67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIV--FGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI 144 (290)
T ss_pred HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHH--hhhccchHHHHHHHHHHHHHHHhHheEEecccccccc
Confidence 345666678889999999999877777 7777888999999 889999999 99999999999988776533211
Q ss_pred ---CcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHH---HHH-hHHHHhHHHhhhccHHHHHHHHHhccH
Q 022197 166 ---NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCS---TVV-GLPMLIPPMLLTGELFKAWNSCSQHLY 238 (301)
Q Consensus 166 ---~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~---~~~-~~~~~~~~~~~~gel~~~~~f~~~~p~ 238 (301)
.+...|+.+.++|.++-+.....-++. ++ ++.+..+.. -++ +..+..+. ... +.+ ..+.
T Consensus 145 ~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~---~~~~~~~~~~~g~~~~~~~~~~~~---~~~--~~~----~~~~ 210 (290)
T TIGR00776 145 KSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV---DGLSVLLPQAIGMVIGGIIFNLGH---ILA--KPL----KKYA 210 (290)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC---CcceehhHHHHHHHHHHHHHHHHH---hcc--cch----HHHH
Confidence 223679999999999999988887754 22 344443222 111 22222111 000 111 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHhhhhc-----ccccccccc----eeEEEe
Q 022197 239 VYGVLVFEAMATFIGQVSVLSLIA-LFGAATTAMVNPSHKLEAFPQ-----FHNVNILTC----EYACLV 298 (301)
Q Consensus 239 ~~~~l~~~~l~~~~g~~~i~~~i~-~~galt~svv~t~Rk~~sill-----g~~~~~~~~----~G~~lv 298 (301)
.+..++ .++.-.+++.+.+.-.+ +-++-+.++..+.--+.+.+. +++.++.|+ +|.+++
T Consensus 211 ~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lI 279 (290)
T TIGR00776 211 ILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILI 279 (290)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHH
Confidence 223333 45555666666666667 888888888888887777553 999999999 887654
No 32
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.05 E-value=1.8e-06 Score=77.44 Aligned_cols=206 Identities=13% Similarity=0.150 Sum_probs=137.0
Q ss_pred chhHHHHH-HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc--
Q 022197 83 PWKTYVKL-SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA-- 159 (301)
Q Consensus 83 p~~~y~~~-s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~-- 159 (301)
+.|+|+.+ +++-+.++.+.++|++|+|.+=.+++--++|++|.++++++ +|++|+..+-+...+-..|+++..-.
T Consensus 95 g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~--LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 95 GKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAF--LKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred CcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHH--HcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 33445433 45556677899999999999999999999999999999999 99999999999999999999886653
Q ss_pred ---CCCC---C--CCcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHH
Q 022197 160 ---DAQT---S--PNFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWN 231 (301)
Q Consensus 160 ---~~~~---~--~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~ 231 (301)
|..+ + .+.+.-|-...+.+.+.-+-..+.-.++-|+- +..-.+-|-..+++...++.+..-|++. +.
T Consensus 173 lFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~---h~~msvsyf~~i~lV~s~I~~~~ig~~~--lP 247 (346)
T KOG4510|consen 173 LFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA---HAIMSVSYFSLITLVVSLIGCASIGAVQ--LP 247 (346)
T ss_pred ccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc---cEEEEehHHHHHHHHHHHHHHhhcccee--cC
Confidence 2211 1 13455677777777777666666655555431 1222355666777766665543334321 11
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHhh----hh-cccccccccceeEEEeec
Q 022197 232 SCSQHLYVYGVLVFEAMATFIGQVSVLSLI--ALFGAATTAMVNPSHKLEA----FP-QFHNVNILTCEYACLVNT 300 (301)
Q Consensus 232 f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i--~~~galt~svv~t~Rk~~s----il-lg~~~~~~~~~G~~lv~~ 300 (301)
...++. ..+.-.++.|+.||+..-+-+ .+-|+.. +.+...-++. ++ +||-.|...|.|++.|..
T Consensus 248 ~cgkdr---~l~~~lGvfgfigQIllTm~lQiErAGpva--im~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvs 318 (346)
T KOG4510|consen 248 HCGKDR---WLFVNLGVFGFIGQILLTMGLQIERAGPVA--IMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVS 318 (346)
T ss_pred ccccce---EEEEEehhhhhHHHHHHHHHhhhhccCCee--hhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeeh
Confidence 111111 123344888999998776544 4666654 3334444443 33 399999999999998864
No 33
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.97 E-value=1.9e-05 Score=62.57 Aligned_cols=78 Identities=14% Similarity=0.252 Sum_probs=65.8
Q ss_pred CchhHHHHHHHHHH-HHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 82 NPWKTYVKLSAVLM-GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 82 ~p~~~y~~~s~~~~-~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
.|+......+.+.. .+..+..+|++|.+ +...+..+..|+.++++++++ +|||.+.+++++++++.+|+++..++|
T Consensus 32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~--~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF--FKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 34443334455443 77889999999999 688899999999999999999 899999999999999999999999887
Q ss_pred CC
Q 022197 161 AQ 162 (301)
Q Consensus 161 ~~ 162 (301)
.+
T Consensus 109 ~~ 110 (113)
T PF13536_consen 109 LT 110 (113)
T ss_pred cc
Confidence 64
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.92 E-value=4.2e-05 Score=60.22 Aligned_cols=117 Identities=13% Similarity=0.201 Sum_probs=81.7
Q ss_pred HhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHH-HH--HhcccC--CCCCCchhHHHHHHHH-HHHHHHHHHHHhhccc
Q 022197 36 YLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL-IY--LQGFTT--KQMMNPWKTYVKLSAV-LMGSHGLTKGSLAFLN 109 (301)
Q Consensus 36 ~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~-~~--~~~~~~--~~~~~p~~~y~~~s~~-~~~~~~l~n~aL~yvs 109 (301)
+..+.+.+++..++ -.+...++.+++..... .. ....++ ..+...+......+.. ...+..+.+.++++++
T Consensus 3 ~a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 79 (126)
T PF00892_consen 3 WAIYSVFSKKLLKK---ISPLSITFWRFLIAGILLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS 79 (126)
T ss_pred eeeHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence 44566777777644 34556667665554421 11 111111 1111122223344444 4777889999999999
Q ss_pred hHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhee
Q 022197 110 YPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT 157 (301)
Q Consensus 110 ~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~ 157 (301)
.+...++....|+.++++++++ ++||++++++++++++..|+.+..
T Consensus 80 ~~~~~~~~~~~pv~~~i~~~~~--~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 80 ASIVSILQYLSPVFAAILGWLF--LGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 789999999999999999998753
No 35
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.36 E-value=0.0029 Score=54.76 Aligned_cols=101 Identities=16% Similarity=0.261 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcch
Q 022197 90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFSM 169 (301)
Q Consensus 90 ~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~~ 169 (301)
.++....+..+-..||+-++-+...-.-+|.-.+|.++++++ ++.|+...+++++++-..|+++..|.|... ...+
T Consensus 59 F~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IV--L~D~~~~~kIlaailAI~GiVmiay~DN~~--a~e~ 134 (290)
T KOG4314|consen 59 FSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIV--LGDRFMGFKILAAILAIGGIVMIAYADNEH--ADEI 134 (290)
T ss_pred eEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHH--hccchhhhhHHHHHHHhCcEEEEEeccchh--hhhh
Confidence 344555666777789999999999999999999999999999 899999999999999999999999988532 3468
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHh
Q 022197 170 IGVIMISGALIMDSFLGNLQEAIFT 194 (301)
Q Consensus 170 ~G~~ll~~sl~~dg~~~~~qe~l~~ 194 (301)
.|+...+.|.++.+++-+.-++...
T Consensus 135 iGi~~AV~SA~~aAlYKV~FK~~iG 159 (290)
T KOG4314|consen 135 IGIACAVGSAFMAALYKVLFKMFIG 159 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999888776654
No 36
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.07 E-value=0.011 Score=48.59 Aligned_cols=67 Identities=9% Similarity=0.135 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheec
Q 022197 90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL 158 (301)
Q Consensus 90 ~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~ 158 (301)
.++.....+..+...+++.|.-++.+....|.+.+.++++++ ++++.+..++.+..+...|..+.+|
T Consensus 87 ~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~--f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 87 SGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIF--FGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhh--cCCcCCHHHHHHHHHHHHHHheeeC
Confidence 345555667788999999999999999999999999999999 8899999999999999999987764
No 37
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=96.67 E-value=0.019 Score=54.72 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197 95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA 161 (301)
Q Consensus 95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~ 161 (301)
..+-.+.|+++++++...--++-...|++.+++++++ ++|+.++.+++..+++..|+.+...++.
T Consensus 267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~--LgE~lt~~~~iG~~LIl~Gv~l~~~~~~ 331 (358)
T PLN00411 267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIF--LNDSLYLGCLIGGILITLGFYAVMWGKA 331 (358)
T ss_pred HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence 3455679999999999999999999999999999999 8999999999999999999999887654
No 38
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=96.55 E-value=0.022 Score=44.97 Aligned_cols=64 Identities=11% Similarity=0.055 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhee
Q 022197 92 AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFT 157 (301)
Q Consensus 92 ~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~ 157 (301)
.++..+..+-..+++.+|.+.--..-+..++.+++.++++ ++||.+++|++.+.++.+|+++.+
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~--f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKL--WHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5577788889999999999999999999999999999999 899999999999999999998754
No 39
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=96.23 E-value=0.089 Score=46.98 Aligned_cols=58 Identities=14% Similarity=0.217 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHh
Q 022197 94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGL 153 (301)
Q Consensus 94 ~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv 153 (301)
...+..+.++++++++.....++....|+..+++++++ ++|+.+..+++++.++..|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~--~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLI--LGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHhc
Confidence 45566789999999999999999999999999999999 88999999999999999886
No 40
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.06 E-value=0.052 Score=50.26 Aligned_cols=126 Identities=12% Similarity=0.166 Sum_probs=80.8
Q ss_pred HHHhhHHHHhhhhhccCCCCchhHHHHHHHHHHHHH---HHH--hc-ccCC-----CCCCchhHHHHHHHHHHHHHHHHH
Q 022197 34 FGYLVNGVCEEYVYNRLQFSYGWYFTFIQGFVYLVL---IYL--QG-FTTK-----QMMNPWKTYVKLSAVLMGSHGLTK 102 (301)
Q Consensus 34 ~~~~~~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~~---~~~--~~-~~~~-----~~~~p~~~y~~~s~~~~~~~~l~n 102 (301)
.+-...+..||+++++++.+....+-..+.+..... ... .+ .++. +++..+...+..+++......+-+
T Consensus 164 ~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~ 243 (303)
T PF08449_consen 164 LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIF 243 (303)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 444557778999997766655444444443222111 111 11 1110 111112222233444444445556
Q ss_pred HHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197 103 GSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA 161 (301)
Q Consensus 103 ~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~ 161 (301)
...+..+-.+..+....+-+.+++++.++ ++++.++.+|+++.++..|..+-.+.+.
T Consensus 244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~--f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 244 YLIKKFSALTTTIVTTLRKFLSILLSVII--FGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred HHHHhcCchhhhhHHHHHHHHHHHHHHHh--cCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 66788888899999999999999999999 7899999999999999999998887654
No 41
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.77 E-value=0.084 Score=49.09 Aligned_cols=66 Identities=17% Similarity=0.236 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 93 VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 93 ~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
.+..+..++-.|+.+.|.+..+=+-+..++...+++..+ ++||.+++++.++.++..|+++.....
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~--l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFF--LGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHH--hcccchHhHHhhHHHHHhhheeeEEeC
Confidence 345666788899999999999999999999999999999 899999999999999999988766543
No 42
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=95.61 E-value=0.1 Score=48.03 Aligned_cols=61 Identities=13% Similarity=0.167 Sum_probs=55.8
Q ss_pred HHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197 99 GLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA 161 (301)
Q Consensus 99 ~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~ 161 (301)
.+.+.++++++-.+..+.-..+|+.++++++++ ++|+.+..+++...++..|+.+.+..+.
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~--lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILF--FGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhh--cCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 456689999999999999999999999999999 8899999999999999999998887654
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=95.40 E-value=0.2 Score=44.93 Aligned_cols=124 Identities=6% Similarity=-0.016 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHh-cc-HHHHHHHHHH
Q 022197 170 IGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQ-HL-YVYGVLVFEA 247 (301)
Q Consensus 170 ~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~-~p-~~~~~l~~~~ 247 (301)
.|+.+++++.++=|..+...+. ..+ .++.|+.++=.+++.+.+.+.....++..+..+-.++ ++ +....+...+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~---~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP---LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG 77 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc---CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence 3889999999999999988765 322 4689999999888877766554344443221111111 11 2223345556
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEE
Q 022197 248 MATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACL 297 (301)
Q Consensus 248 l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~l 297 (301)
+....++.+.+.-+++.++-+.+++..+--+++.++ +|+++..+|.|+++
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~ 132 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVII 132 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 666777888889999999888888888888777554 99999999988654
No 44
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.20 E-value=0.078 Score=42.55 Aligned_cols=74 Identities=8% Similarity=0.143 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHH-hhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197 86 TYVKLSAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA 161 (301)
Q Consensus 86 ~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~-Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~ 161 (301)
.+...-.++..+..+=..|+|++|.++---. .....+-+.+.++++ ++++.++.+++.+.++..|++.....+.
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~--f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLL--FDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 3455566777888888899999988875444 678999999999999 8999999999999999999998877653
No 45
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=95.07 E-value=0.31 Score=44.75 Aligned_cols=64 Identities=11% Similarity=0.100 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
..+..+-++++++++.+...++-...|+..++.++++ ++|+.+..++++..++..|+.+....+
T Consensus 224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~--l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGL--GGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH--cCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4456688999999999999999999999999999999 889999999999999999999876644
No 46
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=95.01 E-value=0.097 Score=42.55 Aligned_cols=69 Identities=13% Similarity=0.101 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhh--ccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197 91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAF--IPGLRRKYPAHEYVSALLLVVGLILFTLADA 161 (301)
Q Consensus 91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l--~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~ 161 (301)
-.++..+..+-+.+++.++.+.---+-+..++.+++.++. + ++|+.++.|++.+.++.+|+.+...++.
T Consensus 55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~--~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPW--FNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 3457778889999999988888777777777777777774 6 6899999999999999999999876543
No 47
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=94.88 E-value=0.036 Score=43.16 Aligned_cols=108 Identities=9% Similarity=0.038 Sum_probs=72.5
Q ss_pred hhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH-HHHHHHHHHHHHHH
Q 022197 183 SFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA-MATFIGQVSVLSLI 261 (301)
Q Consensus 183 g~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~-l~~~~g~~~i~~~i 261 (301)
|.....+++..++ .++.+..++....+.+ .++.....+... ....+++.+..++..+ ++..+++.+.+...
T Consensus 4 a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 4 AIYSVFSKKLLKK---ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred eeHHHHHHHHhcc---CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence 5566677777765 3577888888887776 443333322211 1111223333333334 44678889999999
Q ss_pred hhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 262 ALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 262 ~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
++.++-..++...+.-+++.+. +++++..+|+|++++
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~ 117 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILI 117 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 9999999999999988888654 999999999997654
No 48
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=94.81 E-value=0.35 Score=44.55 Aligned_cols=126 Identities=9% Similarity=-0.076 Sum_probs=87.8
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH
Q 022197 168 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA 247 (301)
Q Consensus 168 ~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~ 247 (301)
...|+.+++++.++=|........ .. ..++.|..++-..++.+.+.+.....++..+.... .+++.........+
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~-~~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 80 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKL-IY---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVSA 80 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHH-hc---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHHH
Confidence 457999999999999999988843 32 24688999999888877666554444443221111 12333222233444
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----ccccccccceeEEEe
Q 022197 248 MATFIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ-----FHNVNILTCEYACLV 298 (301)
Q Consensus 248 l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~sill-----g~~~~~~~~~G~~lv 298 (301)
+.....+.+.+.-+++.++-..+++..+.-+++.++ +++++..+|+|+++.
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~ 136 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILA 136 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 555566788888999999999999988888877654 999999999987654
No 49
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=94.70 E-value=1.1 Score=40.51 Aligned_cols=191 Identities=14% Similarity=0.050 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCCCCCCcc
Q 022197 89 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQTSPNFS 168 (301)
Q Consensus 89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~~~~~~~ 168 (301)
.-+......+.+=+.|++-+|.-+.+.+.-..|+-+.+++ .||. ++.+-+.+-..|+.+..- +.++..+-|
T Consensus 76 ~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~------sRr~--~d~vwvaLAvlGi~lL~p-~~~~~~~lD 146 (292)
T COG5006 76 AYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS------SRRL--RDFVWVALAVLGIWLLLP-LGQSVWSLD 146 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh------ccch--hhHHHHHHHHHHHHhhee-ccCCcCcCC
Confidence 3455555556677889999999999999999998887654 3544 455556666677775543 222334668
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHh-hCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHH
Q 022197 169 MIGVIMISGALIMDSFLGNLQEAIFT-MNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEA 247 (301)
Q Consensus 169 ~~G~~ll~~sl~~dg~~~~~qe~l~~-~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~ 247 (301)
+.|..+.+.+-.|=+.+-+.-+|.-+ +++...----|..-..+.+|+-. ...|.- .-+|.+...-+.-+
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~---~~ag~~-------l~~p~ll~laLgva 216 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGA---AQAGPA-------LFSPSLLPLALGVA 216 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhh---hhcchh-------hcChHHHHHHHHHH
Confidence 99999999999999999888888874 33221111112233333333321 111110 12555433222222
Q ss_pred HHH-HHHHHHHHHHHhhhhHHHHHHHHHHHHHhh-----hhcccccccccceeEEEe
Q 022197 248 MAT-FIGQVSVLSLIALFGAATTAMVNPSHKLEA-----FPQFHNVNILTCEYACLV 298 (301)
Q Consensus 248 l~~-~~g~~~i~~~i~~~galt~svv~t~Rk~~s-----illg~~~~~~~~~G~~lv 298 (301)
+++ ++=...-....++-.+=+..+...+--.+. +++|+.+|+.||.|+++|
T Consensus 217 vlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~V 273 (292)
T COG5006 217 VLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAV 273 (292)
T ss_pred HHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 222 222344455666777777777776666554 445999999999998765
No 50
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=93.96 E-value=1.4 Score=41.75 Aligned_cols=59 Identities=15% Similarity=0.281 Sum_probs=53.1
Q ss_pred HHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheec
Q 022197 98 HGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL 158 (301)
Q Consensus 98 ~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~ 158 (301)
+.++..+++.++-.++.+.-..||+.+.++++++ ++++.+..+++...++..|+.+.++
T Consensus 290 n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~--~ge~lt~~~~iG~~lii~Gv~lYs~ 348 (350)
T PTZ00343 290 NEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIII--FQTQVTLLGYLGMAVAILGALLYSL 348 (350)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHH--hCCCCchHhHHHHHHHHHHHHHHhh
Confidence 3344469999999999999999999999999999 8899999999999999999988654
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=93.90 E-value=1 Score=41.43 Aligned_cols=65 Identities=11% Similarity=0.000 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 94 ~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
...+..+.|+++|+++...-.++-...|+...++++++ ++|+.+..+++..+++..|+.+....+
T Consensus 225 t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~--lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 225 MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALL--LSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 34456678999999999999999999999999999999 889999999999999999998876643
No 52
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=93.83 E-value=1.2 Score=40.82 Aligned_cols=65 Identities=14% Similarity=-0.005 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 94 ~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
...+..+.|+++++++-....++-...|+...++++++ ++|+.++.+++...++.+|++......
T Consensus 219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~--lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIF--LGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 34455688999999999999999999999999999999 889999999999999999988776543
No 53
>COG2510 Predicted membrane protein [Function unknown]
Probab=93.76 E-value=0.16 Score=41.04 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=57.1
Q ss_pred hHHHHHHH-HHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheec
Q 022197 85 KTYVKLSA-VLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL 158 (301)
Q Consensus 85 ~~y~~~s~-~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~ 158 (301)
+.|..+|- .-..+..+-..|+|-=+.|-..=..+..++.+.++++++ +++|.+..+|+.+.+++.|+++.++
T Consensus 67 ~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lf--L~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 67 WLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILF--LGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred ehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHH--hcCCCCHHHHHHHHHHHhCeeeEec
Confidence 44555543 334444577788887666666777889999999999999 9999999999999999999987654
No 54
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=93.62 E-value=0.33 Score=38.33 Aligned_cols=70 Identities=11% Similarity=0.171 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHhh-ccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 89 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKS-TKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks-~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
..-.++..+..+=..|+|.+|..+---.-+ ...+-+.+.++++ ++++.++.+++.+.++..|+++....+
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~--f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 444556667777778899999888776655 6888889999999 899999999999999999999886654
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=93.26 E-value=1.7 Score=40.00 Aligned_cols=65 Identities=12% Similarity=0.127 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197 95 MGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA 161 (301)
Q Consensus 95 ~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~ 161 (301)
..+..+.+.++++++....-+.-...|+...++++++ ++|+.+..+++...++..|+.+...++.
T Consensus 226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~--lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALL--LDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 3455578889999999888899999999999999999 8899999999999999999998877653
No 56
>COG2510 Predicted membrane protein [Function unknown]
Probab=93.09 E-value=0.061 Score=43.49 Aligned_cols=121 Identities=12% Similarity=0.018 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHHH
Q 022197 172 VIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF 251 (301)
Q Consensus 172 ~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~~ 251 (301)
.++.++|.++-|++..+.+.=.++ ..+.+.. +--+.....++...++.+|+....-+ -+|..+..+.++++.+.
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At-~IRtiVi~~~l~~v~~~~g~~~~~~~---~~~k~~lflilSGla~g 78 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEG--VDPDFAT-TIRTIVILIFLLIVLLVTGNWQAGGE---IGPKSWLFLILSGLAGG 78 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc--cCccHHH-HHHHHHHHHHHHHHHHhcCceecccc---cCcceehhhhHHHHHHH
Confidence 356677888888887665433332 2222322 23344455555555566777654322 26677788999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHH----HHHHHhhhhc-ccccccccceeEEEe
Q 022197 252 IGQVSVLSLIALFGAATTAMVN----PSHKLEAFPQ-FHNVNILTCEYACLV 298 (301)
Q Consensus 252 ~g~~~i~~~i~~~galt~svv~----t~Rk~~sill-g~~~~~~~~~G~~lv 298 (301)
++-++-|+-++.-.+--..=+- .+--++|+++ |+.+|..+|+|++|+
T Consensus 79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI 130 (140)
T COG2510 79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLI 130 (140)
T ss_pred HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999888754431111000 0112455554 999999999998765
No 57
>PRK11431 multidrug efflux system protein; Provisional
Probab=92.23 E-value=0.6 Score=36.54 Aligned_cols=70 Identities=16% Similarity=0.221 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHhhccchHHH-HHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc
Q 022197 88 VKLSAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA 159 (301)
Q Consensus 88 ~~~s~~~~~~~~l~n~aL~yvs~p~~-~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~ 159 (301)
......+..+..+=..|+|.+|..+- -+--....+-+.+.|+++ ++++.++.|++.+.++..|++.....
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~--f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVL--LGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 34455667777777788899888764 455557888999999999 88999999999999999999976543
No 58
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=92.00 E-value=9.7 Score=34.88 Aligned_cols=176 Identities=11% Similarity=0.082 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHH-HhhccchhhhhhhhhccccccccCcchh----hHHhHHHHHhhheeccCCCC
Q 022197 89 KLSAVLMGSHGLTKGSLAFLNYPAQLM-FKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTLADAQT 163 (301)
Q Consensus 89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v-~Ks~k~i~vml~~~l~~gl~kry~~~~~----~~v~~i~~Gv~lf~~~~~~~ 163 (301)
..+++.......+..|++++.++.-.= --..-++-+-++++++ ++|-.+..++ .+++++..|+.+.++.|.++
T Consensus 50 lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~--fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~ 127 (269)
T PF06800_consen 50 LSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLF--FGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS 127 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhh--cCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence 345666677778888888755432111 1123355677889888 7888887776 58899999999999988755
Q ss_pred CC----CcchHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHh-HHHhhhccHHHHHHHHHhccH
Q 022197 164 SP----NFSMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLI-PPMLLTGELFKAWNSCSQHLY 238 (301)
Q Consensus 164 ~~----~~~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~-~~~~~~gel~~~~~f~~~~p~ 238 (301)
+. .+..-|+..++++.+.-..+....+. . +.++++..+-- .++..... .......+ ...+++
T Consensus 128 ~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~-~----~~~~~~~~lPq-aiGm~i~a~i~~~~~~~-------~~~~k~ 194 (269)
T PF06800_consen 128 DKSSSKSNMKKGILALLISTIGYWIYSVIPKA-F----HVSGWSAFLPQ-AIGMLIGAFIFNLFSKK-------PFFEKK 194 (269)
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHh-c----CCChhHhHHHH-HHHHHHHHHHHhhcccc-------cccccc
Confidence 32 23456999999999998888877544 2 23444444322 22211111 11111110 001122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhh
Q 022197 239 VYGVLVFEAMATFIGQVSVLSLIALFGAATTAMVNPSHKLEA 280 (301)
Q Consensus 239 ~~~~l~~~~l~~~~g~~~i~~~i~~~galt~svv~t~Rk~~s 280 (301)
.+..+ +.++.=.+||++.+.-++..|.-+--...-+--++|
T Consensus 195 ~~~ni-l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIS 235 (269)
T PF06800_consen 195 SWKNI-LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVIS 235 (269)
T ss_pred hHHhh-HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHH
Confidence 23333 235555678888777777777544433333333444
No 59
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=91.92 E-value=0.63 Score=36.45 Aligned_cols=72 Identities=11% Similarity=0.127 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchHH-HHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 87 YVKLSAVLMGSHGLTKGSLAFLNYPA-QLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 87 y~~~s~~~~~~~~l~n~aL~yvs~p~-~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
.......+..+-.+=-.|+|++|..+ |-+--....+-+.+.|+++ ++++.+..+++.+.++.+|++.-..++
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~--f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLL--FGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHh--cCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 44445556666677778999988876 5666777889999999999 899999999999999999998765543
No 60
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=91.07 E-value=1.4 Score=36.16 Aligned_cols=118 Identities=17% Similarity=0.069 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 022197 173 IMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATFI 252 (301)
Q Consensus 173 ~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~~~ 252 (301)
++.+++=++-++++...-++-++-+ ++.+--+.++..++..+....+..++. .++...+.| .+..+-++.+..
T Consensus 4 lla~~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p---~w~~lGG~lG~~ 76 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP---WWAYLGGLLGVF 76 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC---hHHhccHHHHHH
Confidence 4445555555666666666665432 467777888888887777666655554 333333444 233445777777
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc----------ccccccccceeEEE
Q 022197 253 GQVSVLSLIALFGAATTAMVNPSHKLEAFPQ----------FHNVNILTCEYACL 297 (301)
Q Consensus 253 g~~~i~~~i~~~galt~svv~t~Rk~~sill----------g~~~~~~~~~G~~l 297 (301)
........+.+-|+...+.....-++++-+. .+++++...+|+++
T Consensus 77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l 131 (138)
T PF04657_consen 77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLAL 131 (138)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHH
Confidence 7788888999999999999998888776432 56777777776654
No 61
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=90.54 E-value=1.1 Score=35.29 Aligned_cols=67 Identities=7% Similarity=0.277 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHhhccchHHH-HHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhe
Q 022197 88 VKLSAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILF 156 (301)
Q Consensus 88 ~~~s~~~~~~~~l~n~aL~yvs~p~~-~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf 156 (301)
......+..+..+=..|+|.+|..+- -+.-....+-+.+.++++ ++++.++.|++.+.++..|++..
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~--f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWIL--FGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHh
Confidence 34445566677777788999888764 455557788899999999 89999999999999999999864
No 62
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=90.31 E-value=1.6 Score=38.27 Aligned_cols=62 Identities=11% Similarity=0.226 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhh
Q 022197 92 AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLIL 155 (301)
Q Consensus 92 ~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~l 155 (301)
+.....-.+-++.+||.+-.+..+.-+..++.+.++++++ +++..+..+++++.++..|+.+
T Consensus 160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~--f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRL--FDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHH--hcCCccHHHHHHHHHHHeeeEe
Confidence 4445555688899999999999999999999999999999 7899999999999999888754
No 63
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=89.78 E-value=1.3 Score=34.58 Aligned_cols=86 Identities=10% Similarity=0.130 Sum_probs=53.1
Q ss_pred HHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc-----
Q 022197 210 VVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMATF-IGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ----- 283 (301)
Q Consensus 210 ~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~~-~g~~~i~~~i~~~galt~svv~t~Rk~~sill----- 283 (301)
.++.+.+.......++..+.++.++++|.. .+...++.+. ......+.-.+..++ ..+.+..+--+++.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~ 82 (113)
T PF13536_consen 6 LFSVLFLLIILLIRGRLRDLFRALRRKPWL--WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF 82 (113)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence 345555555555667777666666666643 2333344444 445555666666664 5556666666666543
Q ss_pred ccccccccceeEEEe
Q 022197 284 FHNVNILTCEYACLV 298 (301)
Q Consensus 284 g~~~~~~~~~G~~lv 298 (301)
+|+++..+|.|+++.
T Consensus 83 ~er~~~~~~~a~~l~ 97 (113)
T PF13536_consen 83 KERLSPRRWLAILLI 97 (113)
T ss_pred cCCCCHHHHHHHHHH
Confidence 999999999887653
No 64
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=89.12 E-value=7.4 Score=34.56 Aligned_cols=62 Identities=18% Similarity=0.221 Sum_probs=56.1
Q ss_pred HHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc
Q 022197 96 GSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA 159 (301)
Q Consensus 96 ~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~ 159 (301)
.+..+-+.+++.++...........|+..+++++++ ++|+++..++....++..|+.+....
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~--~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLL--LGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 356688899999999999999999999999999999 88999999999999999999987765
No 65
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=88.88 E-value=0.5 Score=37.50 Aligned_cols=70 Identities=11% Similarity=0.084 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccchHHHHHH-hhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhhe
Q 022197 85 KTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMF-KSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILF 156 (301)
Q Consensus 85 ~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v~-Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf 156 (301)
++|..+-.++..++..=++.+.--+.+..+-. -|..-++|.+.++++ .+|..+++.++.+.+++.|+++.
T Consensus 42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~l--ge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLL--GEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHh--cCcccchhHHHHHHHHHcCeeee
Confidence 34666666677777777788888777776655 699999999999999 46777888899999999998764
No 66
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=88.17 E-value=0.36 Score=44.06 Aligned_cols=60 Identities=17% Similarity=0.374 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhh
Q 022197 94 LMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLIL 155 (301)
Q Consensus 94 ~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~l 155 (301)
...+..+-++++++++......+....|+...++++++ ++|+.+..+++...++..|+.+
T Consensus 221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~--lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWF--LNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHH--hCCCccHHHHHHHHHHHHhHHh
Confidence 34556688899999998888888889999999999999 8999999999999999999875
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=87.16 E-value=7.6 Score=36.71 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=42.4
Q ss_pred HHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC
Q 022197 102 KGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ 162 (301)
Q Consensus 102 n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~ 162 (301)
...+++-+-.+..+-=....+-.++++.++ +++++++.-+++.+++.+|.++...++.+
T Consensus 251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~--f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 251 PIVLRMSSATFFNLSLLTSDFYALIIDIFF--FGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred HHHHHhCccceeehHHHHhhHHHHHHHHHh--cCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 334444333333333344556678899998 78999999999999999999999987754
No 68
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=86.26 E-value=8.9 Score=35.37 Aligned_cols=71 Identities=13% Similarity=0.158 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccC
Q 022197 88 VKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLAD 160 (301)
Q Consensus 88 ~~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~ 160 (301)
...+........+-..|-|.+|+++-=++.=..|.-..+.++++ ++|..+..|+.+-+++-.|+++++.+.
T Consensus 215 v~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i--~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 215 VLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLI--FGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667777788889999999999999999999999999999 789999999999999999999998753
No 69
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=85.65 E-value=9 Score=35.21 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHhh-ccchHHHHHHhhccchhhhhhhhhccccccccCcchh----hHHhHHHHHhhheecc
Q 022197 90 LSAVLMGSHGLTKGSLA-FLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLILFTLA 159 (301)
Q Consensus 90 ~s~~~~~~~~l~n~aL~-yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~----~~v~~i~~Gv~lf~~~ 159 (301)
.+++...+..+-..+++ ++.....-+.-..-|+...++++++ ++|+.+++|+ +..+++..|+.+-..+
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~--l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILI--LGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHH--hccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 45555555555567888 9999999999999999999999999 9999999999 9999999998876543
No 70
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=83.03 E-value=16 Score=32.92 Aligned_cols=103 Identities=11% Similarity=0.106 Sum_probs=62.8
Q ss_pred HHHHhhhhhccCCCCchhHHHHHHHHHHHH-HHH----HhcccCCCCC-----CchhHHHHHHHHHHHHHHHHHHHhhcc
Q 022197 39 NGVCEEYVYNRLQFSYGWYFTFIQGFVYLV-LIY----LQGFTTKQMM-----NPWKTYVKLSAVLMGSHGLTKGSLAFL 108 (301)
Q Consensus 39 ~g~~qE~i~~~~~f~~~~~lt~~q~l~~~~-~~~----~~~~~~~~~~-----~p~~~y~~~s~~~~~~~~l~n~aL~yv 108 (301)
-|+..||++++.+ .+...--.|.-.+.+ +.. +..+.+.++. -..+.|. +.+..+..-.+-...+||.
T Consensus 129 agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~-~i~~~a~gGllva~v~Kya 205 (244)
T PF04142_consen 129 AGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWI-VIFLQAIGGLLVAFVLKYA 205 (244)
T ss_pred HHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHH-HHHHHHHhhHHHHHHHHHH
Confidence 5677999997655 444445555322222 111 1111111111 1112232 2334444555677899999
Q ss_pred chHHHHHHhhccchhhhhhhhhccccccccCcchhhHH
Q 022197 109 NYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSA 146 (301)
Q Consensus 109 s~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v 146 (301)
+==++...-++.++.+.+.++.+ ++.+++..-.+.+
T Consensus 206 dnI~K~fa~a~siv~t~~~s~~l--f~~~~s~~f~lg~ 241 (244)
T PF04142_consen 206 DNIVKGFATAVSIVLTAVLSVLL--FGFPPSLSFLLGA 241 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH--hCCCCchHHhhhe
Confidence 98899999999999999999999 7777777655443
No 71
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=81.38 E-value=2.8 Score=31.78 Aligned_cols=57 Identities=12% Similarity=0.137 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhccchHHH-HHHhhccchhhhhhhhhccccccccCcchhhHHhHH
Q 022197 91 SAVLMGSHGLTKGSLAFLNYPAQ-LMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLL 149 (301)
Q Consensus 91 s~~~~~~~~l~n~aL~yvs~p~~-~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i 149 (301)
..++..+..+=..|+|++|.++- -+......+.+.+.+.++ ++|+.+..|++.+.++
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~--f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFF--FGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH--H--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHhheeeC
Confidence 34677787888889999888765 556678889999999999 8899999999988764
No 72
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=80.15 E-value=50 Score=30.57 Aligned_cols=38 Identities=16% Similarity=0.375 Sum_probs=34.0
Q ss_pred cchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc
Q 022197 120 KVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA 159 (301)
Q Consensus 120 k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~ 159 (301)
.|+..++.|.++ +|||.++.|++++.+-.+|+..-...
T Consensus 108 nPL~~VllG~lf--lkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 108 NPLVNVLLGRLF--LKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHHHH--HHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 478888999999 99999999999999999999976653
No 73
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=76.94 E-value=21 Score=33.44 Aligned_cols=70 Identities=11% Similarity=0.030 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197 90 LSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA 161 (301)
Q Consensus 90 ~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~ 161 (301)
.+.+...-+..+...+..+|-=+++++-..|-+.+.+.|+++ ++++.++.+.+...+-.+|+.+.+..+.
T Consensus 241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~i--F~~pvt~~n~~G~~iai~Gv~~Y~~~k~ 310 (316)
T KOG1441|consen 241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLI--FGNPVTFLNALGYAIAILGVFLYSRAKL 310 (316)
T ss_pred HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeee--ecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 345555566778888999999999999999999999999999 8898889999999999999998766543
No 74
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.89 E-value=16 Score=30.44 Aligned_cols=122 Identities=15% Similarity=0.029 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHHHHHhHHHHhHHHhhhccHHHHHHHHHhccHHHHHHHHHHHHH
Q 022197 171 GVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPMLIPPMLLTGELFKAWNSCSQHLYVYGVLVFEAMAT 250 (301)
Q Consensus 171 G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~~~~~~~~~~~~~~~~gel~~~~~f~~~~p~~~~~l~~~~l~~ 250 (301)
.+++.+++=++-..++...-|+-+.-+ +|.--.+.++..++..+....+. .+-.+.++...++|. +...-++.|
T Consensus 6 ~ll~~i~aG~~l~~Q~~iN~qL~~~~~--spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pw---W~~~GG~lG 79 (150)
T COG3238 6 YLLFAILAGALLPLQAAINGRLARYLG--SPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPW---WAWIGGLLG 79 (150)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCch---HHHHccchh
Confidence 344445555555555555556655432 46666667777776666555444 333333344455562 122223444
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhhc----------ccccccccceeEEEe
Q 022197 251 FIGQVSVLSLIALFGAATTAMVNPSHKLEAFPQ----------FHNVNILTCEYACLV 298 (301)
Q Consensus 251 ~~g~~~i~~~i~~~galt~svv~t~Rk~~sill----------g~~~~~~~~~G~~lv 298 (301)
+.-....-....+-|+.++..+...-++++=+. -++++..-+.|++++
T Consensus 80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~ 137 (150)
T COG3238 80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLV 137 (150)
T ss_pred hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHH
Confidence 444444456777889988888888888776332 356776666666543
No 75
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=56.36 E-value=1.2e+02 Score=28.81 Aligned_cols=66 Identities=12% Similarity=0.122 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheec
Q 022197 91 SAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTL 158 (301)
Q Consensus 91 s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~ 158 (301)
.+.+...-.+.....||-+==++.-.-|+.++.+.+.++.+ ++.+++..=.+.+.++...+.+...
T Consensus 257 Vl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~L--f~~~~t~~F~lG~~lVi~Si~lY~~ 322 (345)
T KOG2234|consen 257 VLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIAL--FDFQLTLYFLLGALLVILSIFLYSL 322 (345)
T ss_pred HHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH--ccCCchHHHHHHHHHHHHHHHHhhc
Confidence 34444455577778899888888888888999999999888 5677776655666666665555553
No 76
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=52.69 E-value=28 Score=31.70 Aligned_cols=58 Identities=14% Similarity=0.028 Sum_probs=52.1
Q ss_pred HHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheecc
Q 022197 100 LTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA 159 (301)
Q Consensus 100 l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~ 159 (301)
+-..|++.+|-++.-+.-|.-|..-.+.|+++ ++++.+..||+++..++.+.+-.++.
T Consensus 226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~--L~e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 226 LEMIALRRLPARTFGTLLSLEPALAALSGLIF--LGETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHhccccc
Confidence 56678999999999999999999999999999 99999999999999999887755554
No 77
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=49.22 E-value=57 Score=30.19 Aligned_cols=33 Identities=15% Similarity=0.441 Sum_probs=25.0
Q ss_pred hhhhhhccccccccCcchhhHHhHHHHHhhheecc
Q 022197 125 MVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLA 159 (301)
Q Consensus 125 ml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~ 159 (301)
++++.+. ++..+++..|+.+.++-+|.++++..
T Consensus 283 Ll~Siiy--F~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 283 LLFSIIY--FENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred HhheeeE--ecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566666 67788888888888888888877653
No 78
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=48.80 E-value=1.5e+02 Score=27.48 Aligned_cols=50 Identities=12% Similarity=0.252 Sum_probs=37.3
Q ss_pred HHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCCC
Q 022197 111 PAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADAQ 162 (301)
Q Consensus 111 p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~~ 162 (301)
++..+.--++=..|.++++++ +.|-++....-+-+++..|+.+=++++.+
T Consensus 287 ~~aatvTTaRKavTi~lSfll--FsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 287 LIAATVTTARKAVTILLSFLL--FSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred hHHHHHHHhHhHHHHHHHHHH--HcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 344444455556788899999 77777776677888899999999988743
No 79
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=47.78 E-value=2.2e+02 Score=26.05 Aligned_cols=64 Identities=19% Similarity=0.171 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchh----hHHhHHHHHhh
Q 022197 89 KLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEY----VSALLLVVGLI 154 (301)
Q Consensus 89 ~~s~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~----~~v~~i~~Gv~ 154 (301)
..++++..++.+...|-+.+-+.+--.+-...++.--+.|.++ +||+-+.+|+ +..+++..|.+
T Consensus 200 l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~i--l~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 200 LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFI--LKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheE--EEecCchhhHHHHHHHHHHHHHhhh
Confidence 3456666666555555555444444444555588888889888 8888888876 34444555544
No 80
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=46.67 E-value=1.3e+02 Score=24.15 Aligned_cols=17 Identities=0% Similarity=-0.253 Sum_probs=14.2
Q ss_pred hcccccccccceeEEEe
Q 022197 282 PQFHNVNILTCEYACLV 298 (301)
Q Consensus 282 llg~~~~~~~~~G~~lv 298 (301)
++||++|+.+|+|++++
T Consensus 97 ~~~E~ls~~~~iGi~lI 113 (129)
T PRK02971 97 WFNETFSLKKTLGVACI 113 (129)
T ss_pred HcCCCCCHHHHHHHHHH
Confidence 56999999999998765
No 81
>PF14150 YesK: YesK-like protein
Probab=41.57 E-value=89 Score=23.24 Aligned_cols=66 Identities=14% Similarity=0.332 Sum_probs=38.7
Q ss_pred hhhhhhhhccccccccCcchh---hH--HhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhhhHHHHHHHHh
Q 022197 123 PVMVMGAFIPGLRRKYPAHEY---VS--ALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAIFT 194 (301)
Q Consensus 123 ~vml~~~l~~gl~kry~~~~~---~~--v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~l~~ 194 (301)
.+..+++++ +||+|.+++ ++ ..+++.+.+..+.--. ....-.|+..+....+..+..+..-|+..|
T Consensus 11 i~f~~S~~l---r~r~p~k~~~~il~~ililis~~~v~~S~f~v---GGweGmg~g~~~~~v~ig~~ig~i~~~~i~ 81 (81)
T PF14150_consen 11 IVFGVSVLL---RKRFPKKQPEIILPLILILISLLTVLISIFLV---GGWEGMGLGVIAFFVFIGSIIGYIAHQFIR 81 (81)
T ss_pred HHHHHHHHH---HHhCCCcchhHHHHHHHHHHHHHHHHHHHheE---cchhhhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344555555 788888775 33 3444444443332110 022346788888888888888887777643
No 82
>COG3949 Uncharacterized membrane protein [Function unknown]
Probab=41.12 E-value=1.3e+02 Score=28.56 Aligned_cols=41 Identities=24% Similarity=0.106 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHh-------hccchHHHHHHhhccchhhhhhhhhc
Q 022197 91 SAVLMGSHGLTKGSL-------AFLNYPAQLMFKSTKVLPVMVMGAFI 131 (301)
Q Consensus 91 s~~~~~~~~l~n~aL-------~yvs~p~~~v~Ks~k~i~vml~~~l~ 131 (301)
++....-..+.|.+| +.-+.|+.++.|...+..-.++..++
T Consensus 219 glIlgvl~~l~nlsLi~~~~~v~~~dIP~l~i~~~~~~~i~lvm~vIi 266 (349)
T COG3949 219 GLILGVLLFLINLSLIALYDKVVNYDIPLLTIAKNFSPLIGLVMSVII 266 (349)
T ss_pred hHHHHHHHHHHHHHHHhhcchhhccCCcHHHHHHhccHHHHHHHHHHH
Confidence 333444444566665 55789999999999999888888877
No 83
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=33.90 E-value=48 Score=26.05 Aligned_cols=70 Identities=14% Similarity=0.069 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccchHHHHH-HhhccchhhhhhhhhccccccccC-cchhhHHhHHHHHhhhee
Q 022197 85 KTYVKLSAVLMGSHGLTKGSLAFLNYPAQLM-FKSTKVLPVMVMGAFIPGLRRKYP-AHEYVSALLLVVGLILFT 157 (301)
Q Consensus 85 ~~y~~~s~~~~~~~~l~n~aL~yvs~p~~~v-~Ks~k~i~vml~~~l~~gl~kry~-~~~~~~v~~i~~Gv~lf~ 157 (301)
++|..+-.++-..+.+-++-|..-+.+..+= ..|.+.+++.+.|..+ +++.+ .+..+...++++|+.++.
T Consensus 53 w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L---GE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 53 WEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL---GEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh---ccccccceeehhhhHHhhhhhhee
Confidence 4577666666666666666666655544443 3556888999999998 45544 455788999999988753
No 84
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=27.03 E-value=1.8e+02 Score=27.02 Aligned_cols=29 Identities=24% Similarity=0.069 Sum_probs=25.7
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHHHHhh
Q 022197 167 FSMIGVIMISGALIMDSFLGNLQEAIFTM 195 (301)
Q Consensus 167 ~~~~G~~ll~~sl~~dg~~~~~qe~l~~~ 195 (301)
.+.+|+.+.+.+.++.|.-.++|+|-.++
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r 32 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR 32 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999987654
No 85
>PRK13499 rhamnose-proton symporter; Provisional
Probab=26.83 E-value=5.6e+02 Score=24.38 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=60.4
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHHHHhhCCCCCHHHHHHHH----HHHhHHHHhHHHhhhccHHHHHHHHH-hccHHHHH
Q 022197 168 SMIGVIMISGALIMDSFLGNLQEAIFTMNPETTQMEMLFCS----TVVGLPMLIPPMLLTGELFKAWNSCS-QHLYVYGV 242 (301)
Q Consensus 168 ~~~G~~ll~~sl~~dg~~~~~qe~l~~~~~~~~~~e~mfy~----~~~~~~~~~~~~~~~gel~~~~~f~~-~~p~~~~~ 242 (301)
...|++..+++.+|.|--.+-|+| .|+ -++|...-. ..+-.|+.. ..+..+++.+ .++ .+|..+..
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~----w~wE~~W~v~gi~~wl~~~~~~-g~~~~~~f~~---~~~~~~~~~~~~ 75 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKK----WSWETMWSVGGIFSWLILPWLI-AALLLPDFWA---YYSSFSGSTLLP 75 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCC----CchhHHHHHHHHHHHHHHHHHH-HHHHhhhHHH---HHHhcCHHHHHH
Confidence 467999999999999999988866 332 134554211 111122221 2233344443 333 35666666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHH
Q 022197 243 LVFEAMATFIGQVSVLSLIALFG-AATTAMVNPS 275 (301)
Q Consensus 243 l~~~~l~~~~g~~~i~~~i~~~g-alt~svv~t~ 275 (301)
-++.++.=.+||+..+..++.-| ++++.+.+-+
T Consensus 76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl 109 (345)
T PRK13499 76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGI 109 (345)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHH
Confidence 66777777899999998888887 3444444433
No 86
>PF15345 TMEM51: Transmembrane protein 51
Probab=25.42 E-value=1.2e+02 Score=27.02 Aligned_cols=17 Identities=18% Similarity=0.430 Sum_probs=14.6
Q ss_pred hhHHhHHHHHhhheecc
Q 022197 143 YVSALLLVVGLILFTLA 159 (301)
Q Consensus 143 ~~~v~~i~~Gv~lf~~~ 159 (301)
-+.+.+++.|++|+.+.
T Consensus 11 AiG~Gml~LGiiM~vW~ 27 (233)
T PF15345_consen 11 AIGVGMLALGIIMIVWN 27 (233)
T ss_pred HHhHhHHHHhhHheeee
Confidence 47888999999999884
No 87
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=22.97 E-value=28 Score=32.19 Aligned_cols=88 Identities=9% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHhhccchhhhhhhhhccccccccCcc-hhhHHhHHHHHhhheeccCCCCCCCcchHHHHHHHHHHHHHhhhHHHHHHH
Q 022197 114 LMFKSTKVLPVMVMGAFIPGLRRKYPAH-EYVSALLLVVGLILFTLADAQTSPNFSMIGVIMISGALIMDSFLGNLQEAI 192 (301)
Q Consensus 114 ~v~Ks~k~i~vml~~~l~~gl~kry~~~-~~~~v~~i~~Gv~lf~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~l 192 (301)
+++.|..++-+.++=.++- +|||.=.. -.++++++..-+.+.++=.. +.+.-+.|++++++.+.+-=..+.|.+ +
T Consensus 53 ~vl~sfAvvliiIIiIIml-F~RrLLCPLGlLCiilimi~lLv~~L~tL--tGQ~LF~Gi~~l~l~~lLaL~vW~Ym~-l 128 (381)
T PF05297_consen 53 TVLYSFAVVLIIIIIIIML-FKRRLLCPLGLLCIILIMIVLLVSMLWTL--TGQTLFVGIVILFLCCLLALGVWFYMW-L 128 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhhcCcchHHHHHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 4444544444443333332 46665432 23445544444444433221 112345799999999888888899976 6
Q ss_pred HhhCCCCCHHHHHH
Q 022197 193 FTMNPETTQMEMLF 206 (301)
Q Consensus 193 ~~~~~~~~~~e~mf 206 (301)
+++++. +++.++-
T Consensus 129 Lr~~GA-s~WtiLa 141 (381)
T PF05297_consen 129 LRELGA-SFWTILA 141 (381)
T ss_dssp --------------
T ss_pred HHHhhh-HHHHHHH
Confidence 666664 5665553
No 88
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.35 E-value=56 Score=30.75 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHhhccchhhhhhhhhccccccccCcchhhHHhHHHHHhhheeccCC
Q 022197 92 AVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSALLLVVGLILFTLADA 161 (301)
Q Consensus 92 ~~~~~~~~l~n~aL~yvs~p~~~v~Ks~k~i~vml~~~l~~gl~kry~~~~~~~v~~i~~Gv~lf~~~~~ 161 (301)
+.....-..+..|+.|-|-+..+-+-+...+...+++..+ ++||.++...+...+.++|-.+......
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~--L~Ekl~~~g~lGc~l~v~Gst~iV~haP 139 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFF--LKEKLNLLGILGCVLCVVGSTTIVIHAP 139 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHH--HHHHHHHhhhhheeEEecccEEEEEecC
Confidence 3445566678889999999999999999999999999999 9999999999999999999765555443
No 89
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=20.62 E-value=93 Score=24.63 Aligned_cols=64 Identities=9% Similarity=-0.100 Sum_probs=33.9
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHhhhh----ccccc-ccccceeEEEee
Q 022197 232 SCSQHLYVYGVLVFEAMATFIGQVSVLSLIALFG-AATTAMVNPSHKLEAFP----QFHNV-NILTCEYACLVN 299 (301)
Q Consensus 232 f~~~~p~~~~~l~~~~l~~~~g~~~i~~~i~~~g-alt~svv~t~Rk~~sil----lg~~~-~~~~~~G~~lv~ 299 (301)
+...+|+....+++|-..+ +..|.++++.+ +++.-++..+-=++|.+ +||+. +...|+|++||.
T Consensus 37 ~Ll~n~~y~ipf~lNq~GS----v~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~ 106 (113)
T PF10639_consen 37 FLLLNPKYIIPFLLNQSGS----VLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALIL 106 (113)
T ss_pred HHHHhHHHHHHHHHHHHHH----HHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHH
Confidence 3555666555566654333 55555666555 33333333444444443 46665 444688877653
No 90
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.54 E-value=2.5e+02 Score=21.52 Aligned_cols=25 Identities=12% Similarity=0.224 Sum_probs=20.0
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHhhhh
Q 022197 20 PKWQQFLICSSGFFFGYLVNGVCEEYV 46 (301)
Q Consensus 20 ~~~~~~~~~~~gi~~~~~~~g~~qE~i 46 (301)
+++.|+++.++||.++- ||+.||.+
T Consensus 25 Er~~q~ilti~aiVg~i--~Gf~~Qql 49 (101)
T KOG4112|consen 25 ERFQQLILTIGAIVGFI--YGFAQQQL 49 (101)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHH
Confidence 45678999999998865 88888865
Done!