Query 022200
Match_columns 301
No_of_seqs 312 out of 4579
Neff 9.9
Searched_HMMs 13730
Date Mon Mar 25 15:34:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022200.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022200hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 4.8E-36 3.5E-40 250.7 18.0 184 12-202 4-235 (255)
2 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 3.7E-35 2.7E-39 241.0 20.7 200 17-226 3-215 (223)
3 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 2.5E-34 1.8E-38 236.0 16.2 180 12-202 32-212 (223)
4 d1ixva_ d.211.1.1 (A:) 26S pro 100.0 2.1E-32 1.6E-36 224.7 19.7 198 18-222 1-215 (229)
5 d1s70b_ d.211.1.1 (B:) Myosin 100.0 1.1E-32 8.2E-37 234.5 17.7 204 13-227 36-279 (291)
6 d2fo1e1 d.211.1.1 (E:1021-1297 100.0 4E-31 2.9E-35 222.9 13.0 178 15-202 31-264 (277)
7 d1n11a_ d.211.1.1 (A:) Ankyrin 100.0 1.1E-29 8E-34 225.5 20.8 195 19-223 2-241 (408)
8 d1wdya_ d.211.1.1 (A:) RNase L 100.0 6.9E-30 5E-34 216.1 18.3 199 16-222 4-262 (285)
9 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 6.6E-30 4.8E-34 213.1 15.9 159 14-175 42-247 (255)
10 d1iknd_ d.211.1.1 (D:) I-kappa 100.0 2.6E-31 1.9E-35 217.5 7.0 177 16-202 1-188 (221)
11 d1ixva_ d.211.1.1 (A:) 26S pro 100.0 1.2E-29 8.7E-34 208.2 16.7 184 13-202 30-216 (229)
12 d2fo1e1 d.211.1.1 (E:1021-1297 100.0 7.7E-31 5.6E-35 221.1 6.7 196 18-224 1-265 (277)
13 d1k1aa_ d.211.1.1 (A:) bcl-3 { 100.0 6.3E-29 4.6E-33 201.5 15.7 198 16-223 2-220 (228)
14 d1n11a_ d.211.1.1 (A:) Ankyrin 100.0 8.4E-28 6.1E-32 213.2 18.9 196 17-223 165-373 (408)
15 d1bd8a_ d.211.1.1 (A:) Cell cy 100.0 3.9E-28 2.8E-32 187.7 14.5 150 19-175 4-155 (156)
16 d1ihba_ d.211.1.1 (A:) p18ink4 100.0 4.9E-28 3.6E-32 186.8 13.9 151 19-175 3-155 (156)
17 d1awcb_ d.211.1.1 (B:) GA bind 99.9 1.2E-27 8.8E-32 184.0 14.5 149 18-172 3-152 (153)
18 d1s70b_ d.211.1.1 (B:) Myosin 99.9 3E-28 2.2E-32 206.9 12.0 180 13-202 69-275 (291)
19 d1ot8a_ d.211.1.1 (A:) Neuroge 99.9 3.5E-27 2.6E-31 190.5 17.1 178 15-202 21-199 (209)
20 d1ot8a_ d.211.1.1 (A:) Neuroge 99.9 4.5E-27 3.2E-31 189.9 17.5 186 30-224 2-200 (209)
21 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 1.2E-27 8.9E-32 184.6 13.5 142 52-202 1-143 (156)
22 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 1.4E-27 1E-31 184.5 13.5 139 55-202 4-143 (156)
23 d1iknd_ d.211.1.1 (D:) I-kappa 99.9 8.4E-28 6.1E-32 196.4 11.6 165 52-224 1-189 (221)
24 d1awcb_ d.211.1.1 (B:) GA bind 99.9 1.2E-26 8.7E-31 178.3 14.5 140 54-202 3-143 (153)
25 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 2E-27 1.4E-31 203.3 8.2 178 14-200 104-300 (301)
26 d1k1aa_ d.211.1.1 (A:) bcl-3 { 99.9 2.8E-25 2E-29 179.7 18.5 168 52-226 2-190 (228)
27 d2ajaa1 a.118.24.1 (A:3-348) H 99.9 2.5E-27 1.9E-31 206.5 4.1 131 14-148 87-225 (346)
28 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 1E-25 7.5E-30 167.4 8.2 119 53-174 3-123 (125)
29 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 7.6E-26 5.5E-30 166.3 6.9 106 88-200 3-109 (118)
30 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 2E-25 1.4E-29 164.1 5.3 107 18-129 3-109 (118)
31 d1wdya_ d.211.1.1 (A:) RNase L 99.9 1.6E-23 1.1E-27 176.6 17.5 179 15-202 70-263 (285)
32 d1ycsb1 d.211.1.1 (B:327-456) 99.9 3.9E-24 2.8E-28 159.8 9.2 119 55-175 3-125 (130)
33 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 3.9E-24 2.8E-28 158.7 8.3 119 17-141 3-123 (125)
34 d2ajaa1 a.118.24.1 (A:3-348) H 99.9 5.2E-26 3.8E-30 198.1 -4.0 122 52-175 89-219 (346)
35 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 9.1E-24 6.6E-28 180.3 8.7 165 52-221 106-300 (301)
36 d1ycsb1 d.211.1.1 (B:327-456) 99.9 1.8E-23 1.3E-27 156.1 7.8 119 19-142 3-125 (130)
37 d1dcqa1 d.211.1.1 (A:369-522) 99.9 3.7E-22 2.7E-26 153.0 15.1 117 58-175 11-136 (154)
38 d1dcqa1 d.211.1.1 (A:369-522) 99.9 3.9E-22 2.8E-26 152.9 12.6 123 20-144 9-138 (154)
No 1
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=4.8e-36 Score=250.75 Aligned_cols=184 Identities=18% Similarity=0.123 Sum_probs=150.5
Q ss_pred ccccCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHH
Q 022200 12 KIKSRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPL 91 (301)
Q Consensus 12 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL 91 (301)
+++.+|.||||+||+.|+.+++++|++.|++.......+..|+||||+|+..|+.+++++|++.|+++ +.+|..|.|||
T Consensus 4 ~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i-~~~d~~g~tpL 82 (255)
T d1oy3d_ 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTAL 82 (255)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHH
T ss_pred cCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccc-cccccccchhh
Confidence 56788999999999999999999999998775444334446999999999999999999999999876 78899999999
Q ss_pred HHHHHCCCHHHHHHHhhcCCcc----------------------------------------------ceecCCCCCchh
Q 022200 92 HLALQNSHTQMVLRLIDVDRNL----------------------------------------------VRVQGREGVTPL 125 (301)
Q Consensus 92 h~A~~~~~~~~v~~Ll~~~~~~----------------------------------------------~~~~d~~g~tpL 125 (301)
|+|+..++.+++++|++..... ++.+|..|.|||
T Consensus 83 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpL 162 (255)
T d1oy3d_ 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (255)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred hhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccc
Confidence 9999999999999998754321 344567778888
Q ss_pred HHHHhc-HHHHHHHHHhCCcchhcc-ccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 126 HYVAEN-VDLLYKFLTACPKSILQV-TIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 126 h~A~~~-~~~~~~lL~~~~~~~~~~-d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
|+|+.. ..+++++|++.+++++.. +..|.||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+..
T Consensus 163 h~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~------gadin~~d~~g~t~L~~A~~~ 235 (255)
T d1oy3d_ 163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA------GADPTARMYGGRTPLGSALLR 235 (255)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHTS
T ss_pred cccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHC
Confidence 888877 667777777777776653 45678888888888888888888875 778888888888888887776
No 2
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.7e-35 Score=241.04 Aligned_cols=200 Identities=26% Similarity=0.323 Sum_probs=180.1
Q ss_pred CCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHH
Q 022200 17 TDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQ 96 (301)
Q Consensus 17 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~ 96 (301)
.++.|+.+|+.|+++.|+.+++..+......|. .|+||||+|+..|+.+++++|+..+... ...+..+.+++++++.
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~--~G~TpLh~Aa~~g~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~ 79 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQ--DSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAAS 79 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCT--TSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCC--CCCCHHHHHHHhhhhccccccccccccc-cccccccccccccccc
Confidence 457899999999999999999887776666555 5999999999999999999999998766 5557789999999999
Q ss_pred CCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHh
Q 022200 97 NSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGW 175 (301)
Q Consensus 97 ~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~ 175 (301)
.++.+++++|++++++ ++.+|..|.||||+|+.. ..+++++|++.|++++.++..|.||||+|+..++.+++++|++.
T Consensus 80 ~~~~~i~~~Ll~~~~d-~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~ 158 (223)
T d1uoha_ 80 AGRDEIVKALLGKGAQ-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYY 158 (223)
T ss_dssp HTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccchhHHHhccCce-eEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccc
Confidence 9999999999999998 899999999999999999 88899999999999999999999999999999999999999986
Q ss_pred hhhcCcccccccccCCCCcHHHHHHHH-------HHHhh-----hhhCCCCchhhhhhhhhhh
Q 022200 176 LRYVNKDDIINRKDDEGSILLHISISR-------KLEST-----VRNFGGREGSSLATVEIAD 226 (301)
Q Consensus 176 ~~~~~~~~~~~~~d~~g~tpLh~A~~~-------~Ll~~-----~~n~~g~tpl~~a~~~~~~ 226 (301)
+.+++.+|.+|+||||+|++. +|++. .+|.+|+||+|+|...+.+
T Consensus 159 ------~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A~~~~~~ 215 (223)
T d1uoha_ 159 ------KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGL 215 (223)
T ss_dssp ------TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHCCTTHHH
T ss_pred ------cceeeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHH
Confidence 899999999999999999988 67766 8899999999999554433
No 3
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.5e-34 Score=236.05 Aligned_cols=180 Identities=20% Similarity=0.232 Sum_probs=166.2
Q ss_pred ccccCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHH
Q 022200 12 KIKSRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPL 91 (301)
Q Consensus 12 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL 91 (301)
..+..|.||||+|+..|+.++++.+++.+........ .+.++++.++..|+.+++++|++.+.++ +.+|..|.|||
T Consensus 32 ~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~Ll~~~~d~-~~~d~~g~tpL 107 (223)
T d1uoha_ 32 RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD---AGWSPLHIAASAGRDEIVKALLGKGAQV-NAVNQNGCTPL 107 (223)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred CcCCCCCCHHHHHHHhhhhcccccccccccccccccc---cccccccccccccccchhHHHhccCcee-EeeCCCCCchh
Confidence 3467799999999999999999999998876654443 4889999999999999999999999876 88899999999
Q ss_pred HHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHH
Q 022200 92 HLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLK 170 (301)
Q Consensus 92 h~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~ 170 (301)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|+.. ...+.++|...+.+++..|..|+||||+|+..|+.++++
T Consensus 108 ~~A~~~~~~e~~~~Ll~~g~d-~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~ 186 (223)
T d1uoha_ 108 HYAASKNRHEIAVMLLEGGAN-PDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 186 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred hHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCccchhhhhcCCcchhhhhccccceeeeccCCCCceeccccccCcHHHHH
Confidence 999999999999999999999 899999999999999999 777889999999999999999999999999999999999
Q ss_pred HHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 171 VMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 171 ~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
+|++. |++++.+|.+|+||||+|...
T Consensus 187 ~LL~~------Gad~~~~d~~g~tpl~~A~~~ 212 (223)
T d1uoha_ 187 LLVSQ------GASIYIENKEEKTPLQVAKGG 212 (223)
T ss_dssp HHHHT------TCCSCCCCTTSCCHHHHCCTT
T ss_pred HHHHC------CCCCCCCCCCCCCHHHHHHCC
Confidence 99996 999999999999999998543
No 4
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.1e-32 Score=224.72 Aligned_cols=198 Identities=20% Similarity=0.200 Sum_probs=174.5
Q ss_pred CHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCch--hhhcCCCCCcHHHHHH
Q 022200 18 DQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSF--ARKQNQYGCSPLHLAL 95 (301)
Q Consensus 18 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g~tpLh~A~ 95 (301)
++|||+||+.|+.+.|+.|++..+......+. +|+||||+|+..|+.+++++|++.++++ .+..+..|.+|+|+++
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~--~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 78 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQ--DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 78 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCT--TSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CHhHHHHHHcCCHHHHHHHHHcCCCcccccCC--CCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccc
Confidence 47999999999999999999987665555444 6999999999999999999999998654 3456789999999999
Q ss_pred HCCCHHHHHHHhhcCCcc-ceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHH
Q 022200 96 QNSHTQMVLRLIDVDRNL-VRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVML 173 (301)
Q Consensus 96 ~~~~~~~v~~Ll~~~~~~-~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll 173 (301)
..+..++++.++..+... ....+..+.||++.++.. ..++..+|+..|.+++..|..|+||||+|+..|+.+++++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 158 (229)
T d1ixva_ 79 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 158 (229)
T ss_dssp HHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhccccccccccc
Confidence 999999999999887641 445678899999999998 888899999999999999999999999999999999999999
Q ss_pred HhhhhcCcccccccccCCCCcHHHHHHHH-------HHHhh------hhhCCCCchhhhhhh
Q 022200 174 GWLRYVNKDDIINRKDDEGSILLHISISR-------KLEST------VRNFGGREGSSLATV 222 (301)
Q Consensus 174 ~~~~~~~~~~~~~~~d~~g~tpLh~A~~~-------~Ll~~------~~n~~g~tpl~~a~~ 222 (301)
++ .+.+++.+|.+|+||||+|+.. +|++. .+|.+|+||||+|..
T Consensus 159 ~~-----~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~ 215 (229)
T d1ixva_ 159 GL-----GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 215 (229)
T ss_dssp TT-----TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC
T ss_pred cc-----ccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh
Confidence 85 2478899999999999999998 67754 789999999999964
No 5
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=100.00 E-value=1.1e-32 Score=234.52 Aligned_cols=204 Identities=23% Similarity=0.194 Sum_probs=174.3
Q ss_pred cccCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHH
Q 022200 13 IKSRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLH 92 (301)
Q Consensus 13 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 92 (301)
++.++.|+|+.||+.|++++|+.||+.|++++..+. +|+||||+|+..|+.+++++|++++.+. ...+..+.+||+
T Consensus 36 ~~~~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~---~G~T~L~~A~~~g~~eiv~~Ll~~~~~~-~~~~~~~~~~L~ 111 (291)
T d1s70b_ 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANV---DGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLH 111 (291)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCT---TCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCccCC---CCCcHHHHHHhcCCceeeeeeccccccc-cccccccccccc
Confidence 345566899999999999999999999998765443 4999999999999999999999998876 667889999999
Q ss_pred HHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHH-HHHhCCc--------------------------
Q 022200 93 LALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYK-FLTACPK-------------------------- 144 (301)
Q Consensus 93 ~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~-lL~~~~~-------------------------- 144 (301)
+++..++.++++.|++.++. .+..|..|.+|+++|+.. ...++. ++...+.
T Consensus 112 ~a~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (291)
T d1s70b_ 112 AAASCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (291)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccccccccchhhcccccCcc-cccccccCccccccccccccchhccccccccccccccccccccccccccchhhhccccc
Confidence 99999999999999999988 889999999999999887 333333 3333222
Q ss_pred chhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH-------HHHhh-----hhhCC
Q 022200 145 SILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR-------KLEST-----VRNFG 212 (301)
Q Consensus 145 ~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~-------~Ll~~-----~~n~~ 212 (301)
+....+..|.||||.|+..|+.+++++|++. |++++.+|.+|+||||+|+.. +|+++ .+|+.
T Consensus 191 ~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~------g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~ 264 (291)
T d1s70b_ 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQA------RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKV 264 (291)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ccccccCCCCChhhHHHHcCChhhhcccccc------eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 2334567899999999999999999999986 999999999999999999998 77777 78999
Q ss_pred CCchhhhhhhhhhhh
Q 022200 213 GREGSSLATVEIADY 227 (301)
Q Consensus 213 g~tpl~~a~~~~~~~ 227 (301)
|+||||+|++++..+
T Consensus 265 G~TaL~~A~e~~~~~ 279 (291)
T d1s70b_ 265 GQTAFDVADEDILGY 279 (291)
T ss_dssp SCCTTTSCCSGGGHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999997654433
No 6
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.97 E-value=4e-31 Score=222.86 Aligned_cols=178 Identities=15% Similarity=0.124 Sum_probs=125.4
Q ss_pred cCCCHHHHHHHHhCCHHHHHHHH--------HcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCC
Q 022200 15 SRTDQRLNEAAQAGNVDALYELI--------WEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQY 86 (301)
Q Consensus 15 ~~~~~~L~~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 86 (301)
..|.||||+||..|+.++|+.|+ +.|++++.... +|+||||+|+..|+.+++++|+++|+++ +.+|..
T Consensus 31 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~---~G~TpLh~A~~~g~~~iv~~Ll~~Gad~-n~~~~~ 106 (277)
T d2fo1e1 31 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC---DENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKS 106 (277)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTT
T ss_pred CCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCC---CCCeeecccccccccccccccccccccc-cccccc
Confidence 45889999999999999988775 44666654433 5999999999999999999999999886 788999
Q ss_pred CCcHHHHHHHCCCHHHHHHHhhcCCc--cceec--------------------------------------------CCC
Q 022200 87 GCSPLHLALQNSHTQMVLRLIDVDRN--LVRVQ--------------------------------------------GRE 120 (301)
Q Consensus 87 g~tpLh~A~~~~~~~~v~~Ll~~~~~--~~~~~--------------------------------------------d~~ 120 (301)
|.|||++|+..++.++++++...+.. .++.. +..
T Consensus 107 g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (277)
T d2fo1e1 107 ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYK 186 (277)
T ss_dssp CCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCC
T ss_pred ccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccC
Confidence 99999999999999999988764311 12223 344
Q ss_pred CCchhHHHHhc--HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHH
Q 022200 121 GVTPLHYVAEN--VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHI 198 (301)
Q Consensus 121 g~tpLh~A~~~--~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~ 198 (301)
|.||||+++.. ...+..++...+.+++.+|..|+||||+|+..|+.+++++|+++ |++++.+|.+|+||||+
T Consensus 187 g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~------gadin~~d~~G~T~L~~ 260 (277)
T d2fo1e1 187 GRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ------GASVEAVDATDHTARQL 260 (277)
T ss_dssp CCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT------TCCSSCCCSSSCCHHHH
T ss_pred CCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHC------cCCCCCcCCCCCCHHHH
Confidence 55666665555 33333344455555555566666666666666666666666654 55666666666666666
Q ss_pred HHHH
Q 022200 199 SISR 202 (301)
Q Consensus 199 A~~~ 202 (301)
|++.
T Consensus 261 A~~~ 264 (277)
T d2fo1e1 261 AQAN 264 (277)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 6555
No 7
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=1.1e-29 Score=225.47 Aligned_cols=195 Identities=25% Similarity=0.247 Sum_probs=172.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCC
Q 022200 19 QRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNS 98 (301)
Q Consensus 19 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~ 98 (301)
||||.||..|+.++|+.|++.|++++..+. .|+||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..|
T Consensus 2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~---~g~TpL~~A~~~g~~~iv~~Ll~~gadi-~~~~~~g~t~L~~A~~~g 77 (408)
T d1n11a_ 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNV---KVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIG 77 (408)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCSSS---CCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHT
T ss_pred ChHHHHHHCcCHHHHHHHHHCCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcC
Confidence 899999999999999999999998765433 4999999999999999999999999876 888999999999999999
Q ss_pred CHHHHHHHhhcCCcc--------------------------------ceecCCCCCchhHHHHhc-HHHHHHHHHhCCcc
Q 022200 99 HTQMVLRLIDVDRNL--------------------------------VRVQGREGVTPLHYVAEN-VDLLYKFLTACPKS 145 (301)
Q Consensus 99 ~~~~v~~Ll~~~~~~--------------------------------~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~ 145 (301)
+.+++++|+..+++. ....+..+.++|+.|+.. ...+++.|++.+.+
T Consensus 78 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~ 157 (408)
T d1n11a_ 78 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH 157 (408)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999765432 344577889999999998 77889999999999
Q ss_pred hhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH-------HHHhh-----hhhCCC
Q 022200 146 ILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR-------KLEST-----VRNFGG 213 (301)
Q Consensus 146 ~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~-------~Ll~~-----~~n~~g 213 (301)
++..+..|.+|||+|+..|+.+++++|+++ |++++..+..|.||+|+++.. .|+.. ..+..|
T Consensus 158 ~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~------g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 231 (408)
T d1n11a_ 158 PNAAGKNGLTPLHVAVHHNNLDIVKLLLPR------GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQG 231 (408)
T ss_dssp TTCCCSSCCCHHHHHHHTTCHHHHHHHGGG------TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred CCcCCCcCchHHHHHHHcCCHHHHHHHHhc------CCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCC
Confidence 999999999999999999999999999986 899999999999999999887 33333 567788
Q ss_pred Cchhhhhhhh
Q 022200 214 REGSSLATVE 223 (301)
Q Consensus 214 ~tpl~~a~~~ 223 (301)
.||+++|+..
T Consensus 232 ~t~l~~a~~~ 241 (408)
T d1n11a_ 232 VTPLHLAAQE 241 (408)
T ss_dssp CCHHHHHHHT
T ss_pred CCHHHHHHHh
Confidence 8999888554
No 8
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=6.9e-30 Score=216.12 Aligned_cols=199 Identities=19% Similarity=0.140 Sum_probs=115.2
Q ss_pred CCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchh---------------
Q 022200 16 RTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFA--------------- 80 (301)
Q Consensus 16 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--------------- 80 (301)
+++++|+.|++.|++++|+.|++.|++++...+. .|+||||+|+..|+.++++.|++.+....
T Consensus 4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~--~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~ 81 (285)
T d1wdya_ 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEE--GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCC--CCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhh
Confidence 4678999999999999999999999998765544 49999999999999999999998765220
Q ss_pred -----------------hhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCc---------cceecCCCCCchhHHHHhc-HH
Q 022200 81 -----------------RKQNQYGCSPLHLALQNSHTQMVLRLIDVDRN---------LVRVQGREGVTPLHYVAEN-VD 133 (301)
Q Consensus 81 -----------------~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~---------~~~~~d~~g~tpLh~A~~~-~~ 133 (301)
...+..+.+++++|+..++...++.++....+ .....+..|.||||+|+.. ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T d1wdya_ 82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred cCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCH
Confidence 01123344445555555555444444433221 0122344455555555555 33
Q ss_pred HHHHHHH-hCCcchhccccCCCcHHHHHHHcC----CHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH------
Q 022200 134 LLYKFLT-ACPKSILQVTIRKETALYVAAKND----KLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR------ 202 (301)
Q Consensus 134 ~~~~lL~-~~~~~~~~~d~~g~t~Lh~A~~~g----~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~------ 202 (301)
+++++|+ ..|++++..+..|.++++.+...+ ..+++++|++. |++++.+|..|.||||+|+..
T Consensus 162 ~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~------ga~~n~~~~~g~t~L~~a~~~~~~~~v 235 (285)
T d1wdya_ 162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH------GADVNVRGERGKTPLILAVEKKHLGLV 235 (285)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT------TCCSSCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHC------CCCCCccCCCCCCccchhhhcCcHHHH
Confidence 3333333 335555555555555554433322 22355555543 555555555555555555554
Q ss_pred -HHHhh------hhhCCCCchhhhhhh
Q 022200 203 -KLEST------VRNFGGREGSSLATV 222 (301)
Q Consensus 203 -~Ll~~------~~n~~g~tpl~~a~~ 222 (301)
+|++. .+|.+|.||||+|+.
T Consensus 236 ~~lL~~~g~din~~d~~G~TpL~~A~~ 262 (285)
T d1wdya_ 236 QRLLEQEHIEINDTDSDGKTALLLAVE 262 (285)
T ss_dssp HHHHHSSSCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 33332 445555555555543
No 9
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.97 E-value=6.6e-30 Score=213.12 Aligned_cols=159 Identities=21% Similarity=0.196 Sum_probs=141.4
Q ss_pred ccCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCC----------------
Q 022200 14 KSRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKP---------------- 77 (301)
Q Consensus 14 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~---------------- 77 (301)
+..|.||||+||..|+.++++.|++.|++++.... .|.||||+|+..|+.++++.|++...
T Consensus 42 ~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~---~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 118 (255)
T d1oy3d_ 42 NDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER---GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQD 118 (255)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT---TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------
T ss_pred CCCCCCccchHHhhccccccccccccccccccccc---ccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhh
Confidence 35678999999999999999999999998765443 49999999999999999999876532
Q ss_pred ------------------------------chhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHH
Q 022200 78 ------------------------------SFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY 127 (301)
Q Consensus 78 ------------------------------~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~ 127 (301)
...+.+|..|.||||+|+..++.+++++|++.+++.....+..|.||||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~ 198 (255)
T d1oy3d_ 119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHL 198 (255)
T ss_dssp -------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred hcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccccccc
Confidence 11134678899999999999999999999999999555677899999999
Q ss_pred HHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHh
Q 022200 128 VAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGW 175 (301)
Q Consensus 128 A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~ 175 (301)
|+.. ..+++++|+++|++++.+|..|+||||+|+..++.+++++|+++
T Consensus 199 A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~ 247 (255)
T d1oy3d_ 199 AVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247 (255)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT
T ss_pred cccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 9999 88899999999999999999999999999999999999999997
No 10
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=2.6e-31 Score=217.48 Aligned_cols=177 Identities=19% Similarity=0.161 Sum_probs=149.3
Q ss_pred CCCHHHHHHHHhCCHHHHHH----HHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHH
Q 022200 16 RTDQRLNEAAQAGNVDALYE----LIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPL 91 (301)
Q Consensus 16 ~~~~~L~~A~~~g~~~~v~~----Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL 91 (301)
+|+||||+|+..|+.+.+.. +...+.+++.... +|+||||+|+..|+.+++++|++.++++ +.+|..|.|||
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~---~g~TpLh~A~~~~~~~iv~~L~~~g~d~-~~~d~~g~t~l 76 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN---LQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPL 76 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT---TCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCC---CCCccccccccccccccccccccccccc-ccccccccccc
Confidence 58999999999999765554 4455666544433 5999999999999999999999999877 78899999999
Q ss_pred HHHHHCCCHHHHHHHhhcCCc-----cceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccc-cCCCcHHHHHHHcC
Q 022200 92 HLALQNSHTQMVLRLIDVDRN-----LVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVT-IRKETALYVAAKND 164 (301)
Q Consensus 92 h~A~~~~~~~~v~~Ll~~~~~-----~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d-~~g~t~Lh~A~~~g 164 (301)
|+++..++.++++.|++.+.. ........|.||||.|+.. ...++.++...|..++..+ .+|.||||+|+..|
T Consensus 77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g 156 (221)
T d1iknd_ 77 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 156 (221)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred ccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccc
Confidence 999999999999999986533 2344556789999999999 7777888888888887765 57999999999999
Q ss_pred CHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 165 KLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 165 ~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
+.+++++|+++ |++++.+|.+|+||||+|+..
T Consensus 157 ~~~~v~~Ll~~------gad~~~~~~~G~tpl~~A~~~ 188 (221)
T d1iknd_ 157 NPDLVSLLLKC------GADVNRVTYQGYSPYQLTWGR 188 (221)
T ss_dssp CHHHHHHHHTT------TCCSCCCCTTCCCGGGGCTTS
T ss_pred cHHHHHHHHhc------CCcccccCCCCCCHHHHHHHC
Confidence 99999999986 999999999999999999876
No 11
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=1.2e-29 Score=208.16 Aligned_cols=184 Identities=16% Similarity=0.084 Sum_probs=163.4
Q ss_pred cccCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCch-hhhcCCCCCcHH
Q 022200 13 IKSRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSF-ARKQNQYGCSPL 91 (301)
Q Consensus 13 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~g~tpL 91 (301)
.+.+|.||||+|+..|+.++++.|++.|++++........|.+|+|+++..+..++++.++..+... ....+..+.||+
T Consensus 30 ~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 109 (229)
T d1ixva_ 30 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCL 109 (229)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHH
T ss_pred cCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4578999999999999999999999999887655444456999999999999999999999886543 345678899999
Q ss_pred HHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCC-cchhccccCCCcHHHHHHHcCCHHHH
Q 022200 92 HLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACP-KSILQVTIRKETALYVAAKNDKLKVL 169 (301)
Q Consensus 92 h~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~-~~~~~~d~~g~t~Lh~A~~~g~~~~~ 169 (301)
+.++..++.+++++|++.+.. ...+|..|+||||+|+.. ...++++|++.+ .+++.+|..|+||||+|+..|+.+++
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v 188 (229)
T d1ixva_ 110 HLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA 188 (229)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ccccccchhhhhhhhhhhccc-ccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHHHH
Confidence 999999999999999999998 889999999999999999 677777777765 68899999999999999999999999
Q ss_pred HHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 170 KVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 170 ~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
++|++. .|++++.+|.+|+||||+|+..
T Consensus 189 ~~Ll~~-----~gad~~~~d~~g~t~l~~A~~~ 216 (229)
T d1ixva_ 189 VLLVEK-----YGAEYDLVDNKGAKAEDVALNE 216 (229)
T ss_dssp HHHHHH-----HCCCSCCCCTTSCCTGGGCSCH
T ss_pred HHHHHh-----cCCCCCCcCCCCCCHHHHHhhH
Confidence 999962 3899999999999999999876
No 12
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.96 E-value=7.7e-31 Score=221.14 Aligned_cols=196 Identities=17% Similarity=0.197 Sum_probs=156.0
Q ss_pred CHHHHHHHHh-CCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHH--------HhCCchhhhcCCCCC
Q 022200 18 DQRLNEAAQA-GNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIM--------RLKPSFARKQNQYGC 88 (301)
Q Consensus 18 ~~~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~~g~ 88 (301)
+||||.+++. |..++++.|.+.+.+..+. .+|+||||+||..|+.++++.|+ +.|+++ +.+|.+|+
T Consensus 1 ~~p~~~~~~~~~~~~~~~~l~~~~~n~~~~----~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadv-n~~d~~G~ 75 (277)
T d2fo1e1 1 ESPIKLHTEAAGSYAITEPITRESVNIIDP----RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMDCDEN 75 (277)
T ss_dssp CCCCHHHHHHHSSSCCCSCCSTTTTTTCCC----SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTSC
T ss_pred CChHHHHHHhCCCHHHHHHHHhcCCCcCCC----CCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCc-cccCCCCC
Confidence 4788866555 5666666666766654321 24999999999999999887775 446665 78899999
Q ss_pred cHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCC------------------------
Q 022200 89 SPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACP------------------------ 143 (301)
Q Consensus 89 tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~------------------------ 143 (301)
||||+|+..|+.+++++|+++|++ ++.+|..|.|||++|... ...+..++...+
T Consensus 76 TpLh~A~~~g~~~iv~~Ll~~Gad-~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
T d2fo1e1 76 TPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 154 (277)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSC
T ss_pred eeeccccccccccccccccccccc-cccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcc
Confidence 999999999999999999999999 999999999999999987 333333332211
Q ss_pred -----------------------cchhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHH
Q 022200 144 -----------------------KSILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISI 200 (301)
Q Consensus 144 -----------------------~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~ 200 (301)
...+..+..|+||||+++..++.+++++++.. .+.+.+.+|..|+||||+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~-----~~~~~~~~d~~g~tpL~~A~ 229 (277)
T d2fo1e1 155 GRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE-----KGSNKDKQDEDGKTPIMLAA 229 (277)
T ss_dssp STTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH-----SCCCTTCCCTTCCCHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCCcccccccccccccccccccc-----ccccccccCCCCCCHHHHHH
Confidence 01123455789999999999999999987763 48889999999999999999
Q ss_pred HH-------HHHhh-----hhhCCCCchhhhhhhhh
Q 022200 201 SR-------KLEST-----VRNFGGREGSSLATVEI 224 (301)
Q Consensus 201 ~~-------~Ll~~-----~~n~~g~tpl~~a~~~~ 224 (301)
+. +|+++ .+|.+|+||||+|+...
T Consensus 230 ~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~ 265 (277)
T d2fo1e1 230 QEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANN 265 (277)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred HcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcC
Confidence 98 77777 78999999999997754
No 13
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=6.3e-29 Score=201.48 Aligned_cols=198 Identities=19% Similarity=0.179 Sum_probs=156.3
Q ss_pred CCCHHHHHHHHhCCHHHHHHHHH----cChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHH
Q 022200 16 RTDQRLNEAAQAGNVDALYELIW----EDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPL 91 (301)
Q Consensus 16 ~~~~~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL 91 (301)
+|+||||+||+.|+.++|+.|++ .|.+++.... +|+||||+|+..|+.+++++|+++++.. +..+..|.+++
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~---~g~TpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~~~ 77 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN---LRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAA 77 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCC---CCCccceehhcccccccccccccccccc-ccccccccccc
Confidence 69999999999999999999986 4555543332 5999999999999999999999998776 67788999999
Q ss_pred HHHHHCCCHHHHHHHhhcCCc---cceecCCCCCchhHHHHhc-HHHHHHHHHhCCcc-hhccccCCCcHHHHHHHcCCH
Q 022200 92 HLALQNSHTQMVLRLIDVDRN---LVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKS-ILQVTIRKETALYVAAKNDKL 166 (301)
Q Consensus 92 h~A~~~~~~~~v~~Ll~~~~~---~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~-~~~~d~~g~t~Lh~A~~~g~~ 166 (301)
+.|...++.++++.+...... ..+.......+||+.+... .......|.....+ ....+..+.++|+.|+..+..
T Consensus 78 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~ 157 (228)
T d1k1aa_ 78 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 157 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred ccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhh
Confidence 999999999999887765322 2344556677888888877 44444555544443 334556788899999888888
Q ss_pred HHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH-------HHHhh-----hhhCCCCchhhhhhhh
Q 022200 167 KVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR-------KLEST-----VRNFGGREGSSLATVE 223 (301)
Q Consensus 167 ~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~-------~Ll~~-----~~n~~g~tpl~~a~~~ 223 (301)
.+++.+++. +..++.+|..|+||||+|+.. +|+++ .+|.+|+||||+|++.
T Consensus 158 ~~~~~~~~~------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~ 220 (228)
T d1k1aa_ 158 SMVQLLLQH------GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 220 (228)
T ss_dssp HHHHHHHHT------TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred hhhhhhhhh------ccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhC
Confidence 888888885 788888888899999998888 66665 6788899999988643
No 14
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=8.4e-28 Score=213.18 Aligned_cols=196 Identities=26% Similarity=0.238 Sum_probs=142.7
Q ss_pred CCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHH
Q 022200 17 TDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQ 96 (301)
Q Consensus 17 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~ 96 (301)
+.+||+.|+..|+.++++.|++.|++++.... .|.||+|+++.....++...++...... ...+..|.||||+|+.
T Consensus 165 ~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~---~~~t~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~t~l~~a~~ 240 (408)
T d1n11a_ 165 GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAW---NGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQ 240 (408)
T ss_dssp CCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCT---TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CchHHHHHHHcCCHHHHHHHHhcCCcccccCC---CCCCcchhhhccchhhhhhhhhhccccc-cccCCCCCCHHHHHHH
Confidence 33444444444444444444444443322211 2444444444444444444444333322 3345667788888888
Q ss_pred CCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHh
Q 022200 97 NSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGW 175 (301)
Q Consensus 97 ~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~ 175 (301)
.+..++++++++.+.. .+..+..|.|||+.|+.. ...+.++|++.|++++..+..+.||||.++..++.++++++++.
T Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~ 319 (408)
T d1n11a_ 241 EGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH 319 (408)
T ss_dssp TTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHT
T ss_pred hCcHhHhhhhhccccc-cccccCCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccCcceeeeeeccc
Confidence 8888888888888877 778888899999999988 77888888999999999999999999999999999999999985
Q ss_pred hhhcCcccccccccCCCCcHHHHHHHH-------HHHhh-----hhhCCCCchhhhhhhh
Q 022200 176 LRYVNKDDIINRKDDEGSILLHISISR-------KLEST-----VRNFGGREGSSLATVE 223 (301)
Q Consensus 176 ~~~~~~~~~~~~~d~~g~tpLh~A~~~-------~Ll~~-----~~n~~g~tpl~~a~~~ 223 (301)
|++++.+|.+|+||||+|++. +|+++ .+|++|+||||+|.+.
T Consensus 320 ------g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~ 373 (408)
T d1n11a_ 320 ------QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 373 (408)
T ss_dssp ------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred ------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 999999999999999999988 67777 8899999999999665
No 15
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=3.9e-28 Score=187.69 Aligned_cols=150 Identities=23% Similarity=0.355 Sum_probs=133.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcC-hhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHC
Q 022200 19 QRLNEAAQAGNVDALYELIWED-AYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQN 97 (301)
Q Consensus 19 ~~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 97 (301)
..|+.||..|+++.|+.||+.+ .+++.. +. +|+||||+|+ .|+.+++++|++.+.++ +.++..|.+|+++++..
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~-d~--~g~t~L~~A~-~~~~~~v~~Ll~~~~~~-~~~~~~~~~~l~~~~~~ 78 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLHRELVHPDAL-NR--FGKTALQVMM-FGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCC-CT--TSCCHHHHSC-TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCCcc-CC--CCCccccccc-ccccccccccccccccc-ccccccccccccccccc
Confidence 5699999999999999999874 454333 32 5999999886 58899999999998876 77788999999999999
Q ss_pred CCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHh
Q 022200 98 SHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGW 175 (301)
Q Consensus 98 ~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~ 175 (301)
++.++++++++++++ ++.+|..|+||||+|+.. ..+++++|+ .|++++.+|.+|+||||+|+..|+.+++++|++|
T Consensus 79 ~~~~~~~~~l~~~~~-~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 79 GFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred ccccccccccccccc-cccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence 999999999999998 899999999999999999 777888877 6899999999999999999999999999999975
No 16
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=4.9e-28 Score=186.81 Aligned_cols=151 Identities=20% Similarity=0.279 Sum_probs=134.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCC
Q 022200 19 QRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNS 98 (301)
Q Consensus 19 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~ 98 (301)
++||+||..|++++|+.|++.|++++..+. +|+||||+|+ .|+.+++++|++.++++ +.++..|.+|++.++..+
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~---~g~TpL~~A~-~~~~ei~~~Ll~~~a~~-~~~~~~~~~~l~~~~~~~ 77 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVNVNAQNG---FGRTALQVMK-LGNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAG 77 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTCCCT---TSCCHHHHCC-SSCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCcCccCC---cccccccccc-ccccccccccccccccc-ccccccCccccccccccc
Confidence 789999999999999999999998765433 5999999875 78999999999998876 778999999999999999
Q ss_pred CHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCC-cchhccccCCCcHHHHHHHcCCHHHHHHHHHh
Q 022200 99 HTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACP-KSILQVTIRKETALYVAAKNDKLKVLKVMLGW 175 (301)
Q Consensus 99 ~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~-~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~ 175 (301)
+.+.++.|++.+.+ ++..|..|.+|||+|+.. ..+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|+++
T Consensus 78 ~~~~~~~l~~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ 155 (156)
T d1ihba_ 78 FLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155 (156)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cccccccccccccc-ccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999999988 899999999999999998 666667666555 48899999999999999999999999999985
No 17
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95 E-value=1.2e-27 Score=183.97 Aligned_cols=149 Identities=23% Similarity=0.302 Sum_probs=130.9
Q ss_pred CHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHC
Q 022200 18 DQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQN 97 (301)
Q Consensus 18 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 97 (301)
.|||+.||+.|+.++|+.||++|++.. . + ..|+||||+|+..++.++++.++...... ...+..+.++++.++..
T Consensus 3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~-~--~~g~t~L~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (153)
T d1awcb_ 3 GKKLLEAARAGQDDEVRILMANGAPFT-T-D--WLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-C-C--TTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHHcCCCcc-c-c--cCCCccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 489999999999999999999998754 2 2 35999999999999999998888876665 55577888999999999
Q ss_pred CCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHH
Q 022200 98 SHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVM 172 (301)
Q Consensus 98 ~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~L 172 (301)
.+.++++++++.+++ .+.+|..|+||||+|+.. ..+++++|++.|++++.+|.+|.||||+|+.+|+.+++++|
T Consensus 78 ~~~~~~~~l~~~~~~-~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 78 GHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccceeeecccccCCc-cccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence 999999999999988 888999999999999998 88888999999999999999999999999999999999876
No 18
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.95 E-value=3e-28 Score=206.89 Aligned_cols=180 Identities=18% Similarity=0.118 Sum_probs=160.0
Q ss_pred cccCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHH
Q 022200 13 IKSRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLH 92 (301)
Q Consensus 13 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 92 (301)
.+..|.||||+|+..|+.++|+.|++++.+...... .+.+||+.|+..|+.++++.|++++... +..|..+.+|++
T Consensus 69 ~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~---~~~~~L~~a~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~ 144 (291)
T d1s70b_ 69 ANVDGLTALHQACIDDNVDMVKFLVENGANINQPDN---EGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLD 144 (291)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred cCCCCCcHHHHHHhcCCceeeeeecccccccccccc---cccccccccccccccchhhcccccCccc-ccccccCccccc
Confidence 367789999999999999999999999987644333 4899999999999999999999998765 677999999999
Q ss_pred HHHHCCCHHHHHHHhhcCCcc--------------------------ceecCCCCCchhHHHHhc-HHHHHHHHHhCCcc
Q 022200 93 LALQNSHTQMVLRLIDVDRNL--------------------------VRVQGREGVTPLHYVAEN-VDLLYKFLTACPKS 145 (301)
Q Consensus 93 ~A~~~~~~~~v~~Ll~~~~~~--------------------------~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~ 145 (301)
+|+..+..+.++.++...... ....+..|.||||+|+.. ...++++|++.|++
T Consensus 145 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~d 224 (291)
T d1s70b_ 145 IAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD 224 (291)
T ss_dssp HCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC
T ss_pred cccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceec
Confidence 999999999988888643211 345678899999999999 88889999999999
Q ss_pred hhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 146 ILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 146 ~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
++.++..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|++.
T Consensus 225 in~~~~~g~TpL~~A~~~g~~~iv~lLl~~------Gadv~~~d~~G~TaL~~A~e~ 275 (291)
T d1s70b_ 225 VNIKDYDGWTPLHAAAHWGKEEACRILVEN------LCDMEAVNKVGQTAFDVADED 275 (291)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT------TCCTTCCCTTSCCTTTSCCSG
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHH
Confidence 999999999999999999999999999996 999999999999999999875
No 19
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.95 E-value=3.5e-27 Score=190.54 Aligned_cols=178 Identities=21% Similarity=0.186 Sum_probs=111.0
Q ss_pred cCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHH
Q 022200 15 SRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLA 94 (301)
Q Consensus 15 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A 94 (301)
.+|.||||+||+.|+.++++.|++.|++++.... .+.++++.++..++.....................|.++.+.+
T Consensus 21 ~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (209)
T d1ot8a_ 21 KTGETSLHLAARFARADAAKRLLDAGADANSQDN---TGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILA 97 (209)
T ss_dssp HHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhhccccccccc---ccccccccccccccccccccccccccccccccccccccccccc
Confidence 3455555555555555555555555555433222 2555555555555555444444433333333344555555555
Q ss_pred HHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHH
Q 022200 95 LQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVML 173 (301)
Q Consensus 95 ~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll 173 (301)
.........+.|.+.+++ ++.++..|+|||++++.. ...++..++..+.+++..|..|.||||+|+..|+.+++++|+
T Consensus 98 ~~~~~~~~~~~L~~~~~~-~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll 176 (209)
T d1ot8a_ 98 ARLAIEGMVEDLITADAD-INAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALL 176 (209)
T ss_dssp HHTTCTTHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred ccccchhhhhhhhhhccc-ccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHHHH
Confidence 555566666666666666 667777777777777776 666666677777777777777777777777777777777777
Q ss_pred HhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 174 GWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 174 ~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
++ |++++.+|..|+||||+|+++
T Consensus 177 ~~------gad~n~~d~~g~Tpl~~A~~~ 199 (209)
T d1ot8a_ 177 DN------FANREITDHMDRLPRDVASER 199 (209)
T ss_dssp HT------TCCTTCCCTTSCCHHHHHHHT
T ss_pred HC------CCCCCCcCCCCCCHHHHHHHc
Confidence 75 777777777777777777765
No 20
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.95 E-value=4.5e-27 Score=189.92 Aligned_cols=186 Identities=19% Similarity=0.240 Sum_probs=165.1
Q ss_pred HHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhc
Q 022200 30 VDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDV 109 (301)
Q Consensus 30 ~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ 109 (301)
.++|+.|+++|++++...+. +|.||||+||..|+.+++++|++.++.+ +.++..+.++++.++..++..........
T Consensus 2 ~~~v~~Ll~~g~din~~~d~--~G~t~L~~A~~~g~~e~v~~Ll~~g~~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (209)
T d1ot8a_ 2 AQVISDLLAQGAELNATMDK--TGETSLHLAARFARADAAKRLLDAGADA-NSQDNTGRTPLHAAVAADAMGVFQILLRN 78 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCcCcCcCC--CCCCHHHHHHHcCCHHHHHHHHhhcccc-ccccccccccccccccccccccccccccc
Confidence 47999999999998765444 4999999999999999999999999887 78899999999999999999888877776
Q ss_pred CCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccc
Q 022200 110 DRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRK 188 (301)
Q Consensus 110 ~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~ 188 (301)
...........|.++.+.+... .....++|...+.+++.++..|.|||++++..+..++++.+++. +.+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~------~~~~~~~ 152 (209)
T d1ot8a_ 79 RATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMH------HANRDAQ 152 (209)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT------TCCTTCC
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccc------ccccccc
Confidence 6554556667788899888777 77778888999999999999999999999999999999999986 8899999
Q ss_pred cCCCCcHHHHHHHH-------HHHhh-----hhhCCCCchhhhhhhhh
Q 022200 189 DDEGSILLHISISR-------KLEST-----VRNFGGREGSSLATVEI 224 (301)
Q Consensus 189 d~~g~tpLh~A~~~-------~Ll~~-----~~n~~g~tpl~~a~~~~ 224 (301)
|..|+||||+|+.. .|+++ .+|.+|+||||+|++..
T Consensus 153 d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~ 200 (209)
T d1ot8a_ 153 DDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERL 200 (209)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 99999999999998 77777 78999999999997753
No 21
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1.2e-27 Score=184.56 Aligned_cols=142 Identities=16% Similarity=0.213 Sum_probs=132.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc
Q 022200 52 FVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN 131 (301)
Q Consensus 52 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 131 (301)
+| +|||+||..|+.++|+.|+++|+++ +.+|..|.||||+|+ .|+.+++++|++.+++ ++.++..|.+||+.++..
T Consensus 1 ~~-~~Lh~Aa~~g~~~~v~~Ll~~g~d~-n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~-~~~~~~~~~~~l~~~~~~ 76 (156)
T d1ihba_ 1 WG-NELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMK-LGNPEIARRLLLRGAN-PDLKDRTGFAVIHDAARA 76 (156)
T ss_dssp CH-HHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHH
T ss_pred Ch-HHHHHHHHcCCHHHHHHHHHCCCCc-CccCCcccccccccc-cccccccccccccccc-cccccccCcccccccccc
Confidence 35 8999999999999999999999886 889999999999886 7999999999999999 999999999999999999
Q ss_pred -HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 132 -VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 132 -~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
...+...++..+.+++..+..|.+|||+|+..++.+++++|+++ .+.+++.+|.+|.||||+|++.
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-----~~~~~~~~d~~g~TpL~~A~~~ 143 (156)
T d1ihba_ 77 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH-----TASNVGHRNHKGDTACDLARLY 143 (156)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-----SCCCTTCCCTTSCCHHHHHHHT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccCCCCCCHHHHHHHc
Confidence 78888888999999999999999999999999999999999986 2448899999999999999987
No 22
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1.4e-27 Score=184.46 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=130.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HH
Q 022200 55 THLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VD 133 (301)
Q Consensus 55 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~ 133 (301)
+.||.||..|+.++|++|++.++..++.+|..|+||||+|+ .|+.+++++|++.+.+ ++..+..|.+|++.++.. ..
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~-~~~~~~~~~~~l~~~~~~~~~ 81 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-cccccccccccccccc-ccccccccccccccccccccc
Confidence 45999999999999999999866666899999999999987 5899999999999999 899999999999999999 88
Q ss_pred HHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 134 LLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 134 ~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
.+.+++++.|++++.+|..|.||||+|+..|+.+++++|++ +++++.+|.+|+||||+|++.
T Consensus 82 ~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~~-------~~~~~~~d~~G~TpL~~A~~~ 143 (156)
T d1bd8a_ 82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-------ESDLHRRDARGLTPLELALQR 143 (156)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT-------TSCTTCCCTTSCCHHHHHHHS
T ss_pred cccccccccccccccccCCCCeeeccccccccccccccccc-------cccccccCCCCCCHHHHHHHc
Confidence 89999999999999999999999999999999999999885 889999999999999999987
No 23
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=8.4e-28 Score=196.38 Aligned_cols=165 Identities=19% Similarity=0.219 Sum_probs=137.8
Q ss_pred CCChHHHHHHHcCCHHHH----HHHHHhCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHH
Q 022200 52 FVDTHLHIAASMGHVNFA----LEIMRLKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY 127 (301)
Q Consensus 52 ~g~t~Lh~A~~~g~~~~v----~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~ 127 (301)
+|.||||+|+..|+.+++ +.+...+..+ +.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||+
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~i-n~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d-~~~~d~~g~t~l~~ 78 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFL-NFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRGNTPLHL 78 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCC-CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCCCHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCc-ccCCCCCCcccccccccccccccccccccccc-cccccccccccccc
Confidence 399999999999997554 4455556554 88899999999999999999999999999999 89999999999999
Q ss_pred HHhc-HHHHHHHHHhCCcc------hhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCccccccccc-CCCCcHHHHH
Q 022200 128 VAEN-VDLLYKFLTACPKS------ILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKD-DEGSILLHIS 199 (301)
Q Consensus 128 A~~~-~~~~~~lL~~~~~~------~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d-~~g~tpLh~A 199 (301)
++.. ...+++.++..+.. .......|.||||.|+..++.+++++|++. +..++..+ .+|+||||+|
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~------~~~~~~~~~~~G~T~L~~A 152 (221)
T d1iknd_ 79 ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL------GADVNAQEPCNGRTALHLA 152 (221)
T ss_dssp HHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHH
T ss_pred ccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeeccc------CcccccccccCCCCccccc
Confidence 9998 66777877776544 334455689999999999999999999986 77777654 6799999999
Q ss_pred HHH-------HHHhh-----hhhCCCCchhhhhhhhh
Q 022200 200 ISR-------KLEST-----VRNFGGREGSSLATVEI 224 (301)
Q Consensus 200 ~~~-------~Ll~~-----~~n~~g~tpl~~a~~~~ 224 (301)
++. +|+++ .+|.+|+||+|+|+...
T Consensus 153 ~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~ 189 (221)
T d1iknd_ 153 VDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP 189 (221)
T ss_dssp HHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred cccccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCC
Confidence 998 67766 88999999999997654
No 24
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.94 E-value=1.2e-26 Score=178.31 Aligned_cols=140 Identities=22% Similarity=0.248 Sum_probs=131.0
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-H
Q 022200 54 DTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-V 132 (301)
Q Consensus 54 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~ 132 (301)
.||||.||+.|+.++|+.||+++++. + .|..|+||||+|+..++.++++.++..... ....+..+.++++.++.. .
T Consensus 3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~-~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (153)
T d1awcb_ 3 GKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTC
T ss_pred CHHHHHHHHCCCHHHHHHHHHcCCCc-c-cccCCCcccccccccccccccccccccccc-cccccccccccccccccccc
Confidence 49999999999999999999999865 3 699999999999999999999999998887 677788899999999988 7
Q ss_pred HHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 133 DLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 133 ~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
..+++++...+.+++.+|..|+||||+|+..|+.+++++|+++ |++++.+|.+|.||||+|+.+
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~------gad~~~~d~~g~Tpl~~A~~~ 143 (153)
T d1awcb_ 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY------GADVHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHT
T ss_pred ceeeecccccCCccccccccCchHHHhhhhcchhheeeecccc------ccCCcccCCCCCCHHHHHHHc
Confidence 7888999999999999999999999999999999999999996 999999999999999999987
No 25
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94 E-value=2e-27 Score=203.33 Aligned_cols=178 Identities=9% Similarity=0.056 Sum_probs=106.6
Q ss_pred ccCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCH---HHHHHHHHhCCchhhhcCCCCCcH
Q 022200 14 KSRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHV---NFALEIMRLKPSFARKQNQYGCSP 90 (301)
Q Consensus 14 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~---~~v~~Ll~~~~~~~~~~~~~g~tp 90 (301)
+..|.||||+||..|+.++|+.||+.|+++..... .|+||||.|+..++. ..++.+++........+|..|+||
T Consensus 104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~---~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~~g~t~ 180 (301)
T d1sw6a_ 104 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDN---MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI 180 (301)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCT---TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCc---ccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcccccCCH
Confidence 45677777777777777777777777776654433 377777777766542 122233333222335567777777
Q ss_pred HHHHHHCCC----HH--------HHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHH---HHHhCCcchhccccCCC
Q 022200 91 LHLALQNSH----TQ--------MVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYK---FLTACPKSILQVTIRKE 154 (301)
Q Consensus 91 Lh~A~~~~~----~~--------~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~---lL~~~~~~~~~~d~~g~ 154 (301)
||+++..+. .. ++.++++.+..........+.++++.+... ...... +....+..+|.+|.+|+
T Consensus 181 lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~ 260 (301)
T d1sw6a_ 181 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGD 260 (301)
T ss_dssp HHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSC
T ss_pred HHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCC
Confidence 777665432 22 333444555443444555555666555444 111111 10111223688899999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHH
Q 022200 155 TALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISI 200 (301)
Q Consensus 155 t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~ 200 (301)
||||+|++.|+.+++++|+++ |++++.+|..|.||||+|+
T Consensus 261 TpLh~A~~~g~~~iv~~Ll~~------GAd~~~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 261 TCLNIAARLGNISIVDALLDY------GADPFIANKSGLRPVDFGA 300 (301)
T ss_dssp CHHHHHHHHCCHHHHHHHHHT------TCCTTCCCTTSCCGGGGTC
T ss_pred CHHHHHHHcCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHcC
Confidence 999999999999999999996 9999999999999999985
No 26
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2.8e-25 Score=179.71 Aligned_cols=168 Identities=20% Similarity=0.168 Sum_probs=136.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHH----hCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHH
Q 022200 52 FVDTHLHIAASMGHVNFALEIMR----LKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY 127 (301)
Q Consensus 52 ~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~ 127 (301)
+|+||||+||..|+.++++.|++ .+.++ +.+|..|+||||+|+..|+.+++++|++.|++ .+..+..|.++++.
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~i-n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~ 79 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQTAAHL 79 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CccCCCCCccceehhccccccccccccccccc-cccccccccccccc
Confidence 49999999999999999999886 45544 88899999999999999999999999999999 88999999999999
Q ss_pred HHhc-HHHHHHHHHhC----CcchhccccCCCcHHHHHHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 128 VAEN-VDLLYKFLTAC----PKSILQVTIRKETALYVAAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 128 A~~~-~~~~~~lL~~~----~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
|... ...+.+.+... ....+.......++|+.+.........+.|... ........+..|.+|||.|+..
T Consensus 80 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~l~~a~~~ 154 (228)
T d1k1aa_ 80 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-----GADIDAVDIKSGRSPLIHAVEN 154 (228)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTTCCCHHHHHHHT
T ss_pred ccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhcc-----ccccccccccchhhHHHHHHHh
Confidence 9988 44444444332 223455667788999999999999999998874 1233445678899999999988
Q ss_pred -------HHHhh-----hhhCCCCchhhhhhhhhhh
Q 022200 203 -------KLEST-----VRNFGGREGSSLATVEIAD 226 (301)
Q Consensus 203 -------~Ll~~-----~~n~~g~tpl~~a~~~~~~ 226 (301)
.+++. .+|..|.||+++|+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~ 190 (228)
T d1k1aa_ 155 NSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLL 190 (228)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCH
T ss_pred hhhhhhhhhhhhccccccccccCcchHHHHHHcCCH
Confidence 44444 7789999999999876443
No 27
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.93 E-value=2.5e-27 Score=206.45 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=105.8
Q ss_pred ccCCCHHHHHHHHhCCHHHHHH---HHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhc--CCCCC
Q 022200 14 KSRTDQRLNEAAQAGNVDALYE---LIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQ--NQYGC 88 (301)
Q Consensus 14 ~~~~~~~L~~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~--~~~g~ 88 (301)
+..+.|+|++|++.|+.++++. |++.|++++.... .|+||||+||..|+.++|++|++.++++ +.. +.+|.
T Consensus 87 ~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~---~g~taL~~Aa~~G~~~~v~~Ll~~g~~~-~~~~~~~~g~ 162 (346)
T d2ajaa1 87 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA---ENYQAFRLAAENGHLHVLNRLCELAPTE-IMAMIQAENY 162 (346)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CH---HHHHHHHHHHHTTCHHHHHHHHHSCTTT-HHHHHSHHHH
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCC---CCCCHHHHHHHCCCHHHHHHHHHcCCCc-cccccccCCC
Confidence 3467899999999999887765 6888888766544 4999999999999999999999999876 443 45699
Q ss_pred cHHHHHHHCCCHHHHHHHhhcCCcc--ceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhc
Q 022200 89 SPLHLALQNSHTQMVLRLIDVDRNL--VRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQ 148 (301)
Q Consensus 89 tpLh~A~~~~~~~~v~~Ll~~~~~~--~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~ 148 (301)
||||+|+..|+.++|++|++.|+.. .+..+.+|.||+|.|+.+ ..+++++|++.|++++.
T Consensus 163 t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~ 225 (346)
T d2ajaa1 163 HAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY 225 (346)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHH
T ss_pred ChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcch
Confidence 9999999999999999999998762 234556678888888888 88899999998887654
No 28
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1e-25 Score=167.36 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=105.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCC-chhHHHHhc
Q 022200 53 VDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGV-TPLHYVAEN 131 (301)
Q Consensus 53 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~-tpLh~A~~~ 131 (301)
+.++||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+ .|+.+++++|++.|++ ++.++..|. ||||+|+..
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~-n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~L~~A~~~ 79 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVHDAARE 79 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHHHHHHH
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcCCcc-ccccccccccccccc-cccccccccccccccc-ccccccccccccccccccc
Confidence 668999999999999999999988776 788899999998764 6899999999999998 888888775 699999988
Q ss_pred -HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHH
Q 022200 132 -VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLG 174 (301)
Q Consensus 132 -~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~ 174 (301)
...++++|++.|++++.+|..|+||||+|+..|+.+++++|+.
T Consensus 80 g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 80 GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred ccccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 7788888899999999999999999999999999999999875
No 29
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.92 E-value=7.6e-26 Score=166.31 Aligned_cols=106 Identities=21% Similarity=0.187 Sum_probs=90.5
Q ss_pred CcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCH
Q 022200 88 CSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKL 166 (301)
Q Consensus 88 ~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 166 (301)
.|||++|+..|+.+++++|++.|++ ++.+|..|+||||+|+.. ..+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d-~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~ 81 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV 81 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCC-CCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCC
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhc-cccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCch
Confidence 3788888888888888888888888 888888888888888888 77778888888888888888899999999999999
Q ss_pred HHHHHHHHhhhhcCcccccccccCCCCcHHHHHH
Q 022200 167 KVLKVMLGWLRYVNKDDIINRKDDEGSILLHISI 200 (301)
Q Consensus 167 ~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~ 200 (301)
+++++|+++ |++++.+|.+|+||||+|.
T Consensus 82 ~~v~~Ll~~------Gad~~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 82 SCVKLLLSK------GADKTVKGPDGLTALEATD 109 (118)
T ss_dssp HHHHHHHTT------CCCSSSSSSSTCCCCCTCS
T ss_pred hhhhhhhcc------cccceeeCCCCCCHHHHHh
Confidence 999999885 8888888888888887763
No 30
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.91 E-value=2e-25 Score=164.07 Aligned_cols=107 Identities=19% Similarity=0.256 Sum_probs=84.9
Q ss_pred CHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHC
Q 022200 18 DQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQN 97 (301)
Q Consensus 18 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 97 (301)
+|||++|++.|++++|+.|++.|.+++.... .|+||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~---~g~t~lh~A~~~~~~~~~~~ll~~g~di-n~~d~~g~tpLh~A~~~ 78 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLE---GGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYE 78 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSS---SSCCTTHHHHHHSTTTHHHHHHHSSCTT-TCCSSSCSCHHHHHHTT
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhccccccc---ccccccccccccccccccccccccccee-eecccccccchhhhhhc
Confidence 4788888888888888888888877654433 4888888888888888888888887765 67788888888888888
Q ss_pred CCHHHHHHHhhcCCccceecCCCCCchhHHHH
Q 022200 98 SHTQMVLRLIDVDRNLVRVQGREGVTPLHYVA 129 (301)
Q Consensus 98 ~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~ 129 (301)
|+.+++++|++.|++ ++.+|.+|.||||+|.
T Consensus 79 ~~~~~v~~Ll~~Gad-~~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 79 GHVSCVKLLLSKGAD-KTVKGPDGLTALEATD 109 (118)
T ss_dssp TCCHHHHHHHTTCCC-SSSSSSSTCCCCCTCS
T ss_pred Cchhhhhhhhccccc-ceeeCCCCCCHHHHHh
Confidence 888888888888887 7888888888888764
No 31
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=1.6e-23 Score=176.59 Aligned_cols=179 Identities=19% Similarity=0.169 Sum_probs=119.4
Q ss_pred cCCCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCch---------hhhcCC
Q 022200 15 SRTDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSF---------ARKQNQ 85 (301)
Q Consensus 15 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~---------~~~~~~ 85 (301)
..+.++.+.|+..+..+.....++...+...... .+.++++.|+..|+...++.++...... ....+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (285)
T d1wdya_ 70 KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF---YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRK 146 (285)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT---TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTC
T ss_pred cccchhhHHHhhcCCccccchhhhhccccccccc---CCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcc
Confidence 3455677777777777777777766544322211 3677777777777777777776653321 123345
Q ss_pred CCCcHHHHHHHCCCHHHHHHHhhc-CCccceecCCCCCchhHHHHhc-----HHHHHHHHHhCCcchhccccCCCcHHHH
Q 022200 86 YGCSPLHLALQNSHTQMVLRLIDV-DRNLVRVQGREGVTPLHYVAEN-----VDLLYKFLTACPKSILQVTIRKETALYV 159 (301)
Q Consensus 86 ~g~tpLh~A~~~~~~~~v~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~-----~~~~~~lL~~~~~~~~~~d~~g~t~Lh~ 159 (301)
.|.||||+|+..|+.+++++|++. |++ ++..+..|.++++.+... ...++++|++.|++++.+|..|.||||+
T Consensus 147 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~ 225 (285)
T d1wdya_ 147 GGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLIL 225 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred cCchHHHHHHHcCCHHHHHHHHhccCCC-cccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccch
Confidence 677777777777777777777764 444 677777777766665443 4566777777777777777777777777
Q ss_pred HHHcCCHHHHHHHHHhhhhcCcccccccccCCCCcHHHHHHHH
Q 022200 160 AAKNDKLKVLKVMLGWLRYVNKDDIINRKDDEGSILLHISISR 202 (301)
Q Consensus 160 A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~d~~g~tpLh~A~~~ 202 (301)
|+..|+.+++++||+. .|++++.+|.+|+||||+|++.
T Consensus 226 a~~~~~~~~v~~lL~~-----~g~din~~d~~G~TpL~~A~~~ 263 (285)
T d1wdya_ 226 AVEKKHLGLVQRLLEQ-----EHIEINDTDSDGKTALLLAVEL 263 (285)
T ss_dssp HHHTTCHHHHHHHHHS-----SSCCTTCCCTTSCCHHHHHHHT
T ss_pred hhhcCcHHHHHHHHHc-----CCCCCcCCCCCCCCHHHHHHHc
Confidence 7777777777777762 3677777777777777777776
No 32
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.9e-24 Score=159.80 Aligned_cols=119 Identities=23% Similarity=0.255 Sum_probs=81.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HH
Q 022200 55 THLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VD 133 (301)
Q Consensus 55 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~ 133 (301)
++|+.||..|+.++++.|+++|+++ +.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+.. ..
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~-n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~-~~~~d~~g~tpLh~A~~~g~~ 80 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNV 80 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCc-cccccccccccccccccccccccccccccccc-cccccccCcccccccchhhHH
Confidence 4666677777777777777766654 66666777777777777777777777777766 666777777777777766 66
Q ss_pred HHHHHHHhCCcchhcccc-CCCcHHHHH--HHcCCHHHHHHHHHh
Q 022200 134 LLYKFLTACPKSILQVTI-RKETALYVA--AKNDKLKVLKVMLGW 175 (301)
Q Consensus 134 ~~~~lL~~~~~~~~~~d~-~g~t~Lh~A--~~~g~~~~~~~Ll~~ 175 (301)
+++++|+++|++++..+. .++||++++ +..|+.+++++|+..
T Consensus 81 ~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~ 125 (130)
T d1ycsb1 81 QVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125 (130)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred HHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence 666777777777765553 466665544 456778888888763
No 33
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.9e-24 Score=158.70 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=106.2
Q ss_pred CCHHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCC-cHHHHHH
Q 022200 17 TDQRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGC-SPLHLAL 95 (301)
Q Consensus 17 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~-tpLh~A~ 95 (301)
+.++||.|++.|++++|+.|++.|.+++.... +|.||||+|+ .|+.+++++|+++++++ +.++..+. ||||+|+
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~---~g~t~l~~a~-~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~L~~A~ 77 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAGANPNAPNS---YGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAA 77 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS---SSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHH
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcCCccccccc---cccccccccc-ccccccccccccccccc-cccccccccccccccc
Confidence 56799999999999999999999998765433 5999999765 79999999999999887 66677665 6999999
Q ss_pred HCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHh
Q 022200 96 QNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTA 141 (301)
Q Consensus 96 ~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~ 141 (301)
..|+.+++++|++.|++ ++.+|..|+||||+|+.. ..+++++|+.
T Consensus 78 ~~g~~~~v~~Ll~~ga~-~~~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 78 REGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp HHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred ccccccccccccccccc-cccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999 999999999999999999 8888898864
No 34
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.89 E-value=5.2e-26 Score=198.09 Aligned_cols=122 Identities=14% Similarity=0.100 Sum_probs=103.6
Q ss_pred CCChHHHHHHHcCCHHHHHH---HHHhCCchhhhcCCCCCcHHHHHHHCCCHHHHHHHhhcCCccceecC--CCCCchhH
Q 022200 52 FVDTHLHIAASMGHVNFALE---IMRLKPSFARKQNQYGCSPLHLALQNSHTQMVLRLIDVDRNLVRVQG--REGVTPLH 126 (301)
Q Consensus 52 ~g~t~Lh~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~d--~~g~tpLh 126 (301)
.|.||||+||..|+.+++++ |++.++++ +.+|.+|+||||+||..|+.++|++|++.|++ ++..+ .+|+||||
T Consensus 89 ~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~i-n~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~-~~~~~~~~~g~t~L~ 166 (346)
T d2ajaa1 89 KSEVICFVAAITGCSSALDTLCLLLTSDEIV-KVIQAENYQAFRLAAENGHLHVLNRLCELAPT-EIMAMIQAENYHAFR 166 (346)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSC-C--CHHHHHHHHHHHHTTCHHHHHHHHHSCTT-THHHHHSHHHHHHHH
T ss_pred CCCcHHHHHHHhCCHHHHHHHHHHHhCCCcc-cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-ccccccccCCCChhH
Confidence 58999999999999988766 67777665 88899999999999999999999999999998 77765 46999999
Q ss_pred HHHhc-HHHHHHHHHhCCcch---hccccCCCcHHHHHHHcCCHHHHHHHHHh
Q 022200 127 YVAEN-VDLLYKFLTACPKSI---LQVTIRKETALYVAAKNDKLKVLKVMLGW 175 (301)
Q Consensus 127 ~A~~~-~~~~~~lL~~~~~~~---~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~ 175 (301)
+|+.. ..+++++|++.|++. +..+.++.||+|.|+..|+.+++++|++.
T Consensus 167 ~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ 219 (346)
T d2ajaa1 167 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 219 (346)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS
T ss_pred HHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhC
Confidence 99999 899999999998765 34456678888999999999999999986
No 35
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=9.1e-24 Score=180.33 Aligned_cols=165 Identities=19% Similarity=0.223 Sum_probs=103.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCCCH---HHHHHHhhcCCccceecCCCCCchhHHH
Q 022200 52 FVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNSHT---QMVLRLIDVDRNLVRVQGREGVTPLHYV 128 (301)
Q Consensus 52 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~~~---~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 128 (301)
.|+||||+||..|+.++|++|++.|+++ +.+|..|+||||+||..++. +.+..|++.....+..+|..|+||||++
T Consensus 106 ~G~T~LH~Aa~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~~g~t~lh~~ 184 (301)
T d1sw6a_ 106 HGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHI 184 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcccccCCHHHHH
Confidence 5889999999999999999999988876 77888999999999987652 1222233322222667788899999987
Q ss_pred Hhc-----H--------HHHHHHHHhCCc-chhccccCCCcHHHHHHHcCCHHHHHHH-HHhhhhcCcccccccccCCCC
Q 022200 129 AEN-----V--------DLLYKFLTACPK-SILQVTIRKETALYVAAKNDKLKVLKVM-LGWLRYVNKDDIINRKDDEGS 193 (301)
Q Consensus 129 ~~~-----~--------~~~~~lL~~~~~-~~~~~d~~g~t~Lh~A~~~g~~~~~~~L-l~~~~~~~~~~~~~~~d~~g~ 193 (301)
+.. . +.++.++...+. ........+.++++.+........+..+ +.+. .+..+|.+|.+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~in~~D~~G~ 260 (301)
T d1sw6a_ 185 IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI----IANMLNAQDSNGD 260 (301)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHH----HHHTTTCCCTTSC
T ss_pred HHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHH----HhcCccCCCCCCC
Confidence 754 1 223334444333 3334445566666666655544443332 1110 0334789999999
Q ss_pred cHHHHHHHH-------HHHhh-----hhhCCCCchhhhhh
Q 022200 194 ILLHISISR-------KLEST-----VRNFGGREGSSLAT 221 (301)
Q Consensus 194 tpLh~A~~~-------~Ll~~-----~~n~~g~tpl~~a~ 221 (301)
||||+|++. +|++. ++|++|+||||+|+
T Consensus 261 TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 261 TCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300 (301)
T ss_dssp CHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence 999999999 77777 89999999999984
No 36
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.8e-23 Score=156.13 Aligned_cols=119 Identities=20% Similarity=0.179 Sum_probs=104.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcChhhhhhhcCCCCCChHHHHHHHcCCHHHHHHHHHhCCchhhhcCCCCCcHHHHHHHCC
Q 022200 19 QRLNEAAQAGNVDALYELIWEDAYLIDQIDQVPFVDTHLHIAASMGHVNFALEIMRLKPSFARKQNQYGCSPLHLALQNS 98 (301)
Q Consensus 19 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~~ 98 (301)
+.|+.|+..|+.++|+.|+++|.+++.... +|+||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+.+|
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~---~g~t~Lh~A~~~~~~~~~~~ll~~g~~~-~~~d~~g~tpLh~A~~~g 78 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPND---EGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCN 78 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSCCCCCT---TSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCcccccc---cccccccccccccccccccccccccccc-ccccccCcccccccchhh
Confidence 679999999999999999999998765544 5999999999999999999999998876 888999999999999999
Q ss_pred CHHHHHHHhhcCCccceecC-CCCCchhHHHHhc---HHHHHHHHHhC
Q 022200 99 HTQMVLRLIDVDRNLVRVQG-REGVTPLHYVAEN---VDLLYKFLTAC 142 (301)
Q Consensus 99 ~~~~v~~Ll~~~~~~~~~~d-~~g~tpLh~A~~~---~~~~~~lL~~~ 142 (301)
+.+++++|+++|++ ++..+ ..|.||++++... ..+++++|+..
T Consensus 79 ~~~~v~~Ll~~ga~-v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~ 125 (130)
T d1ycsb1 79 NVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125 (130)
T ss_dssp CHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence 99999999999999 77665 4689998877543 56788888753
No 37
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=3.7e-22 Score=152.97 Aligned_cols=117 Identities=20% Similarity=0.141 Sum_probs=74.2
Q ss_pred HHHHHcCCHHHHHHHHHhCCchh-----hhcCCCCCcHHHHHHHC---CCHHHHHHHhhcCCccceecCCCCCchhHHHH
Q 022200 58 HIAASMGHVNFALEIMRLKPSFA-----RKQNQYGCSPLHLALQN---SHTQMVLRLIDVDRNLVRVQGREGVTPLHYVA 129 (301)
Q Consensus 58 h~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~g~tpLh~A~~~---~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~ 129 (301)
+.|++.++...+..++..+.+.. ...+..|.||||+|+.. ++.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 11 ~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-in~~d~~g~TpLh~A~ 89 (154)
T d1dcqa1 11 CEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYCC 89 (154)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCC-hhhhhhhhcccccccc
Confidence 34445555555544444443321 11245566666666653 456666777776666 6666667777777776
Q ss_pred hc-HHHHHHHHHhCCcchhccccCCCcHHHHHHHcCCHHHHHHHHHh
Q 022200 130 EN-VDLLYKFLTACPKSILQVTIRKETALYVAAKNDKLKVLKVMLGW 175 (301)
Q Consensus 130 ~~-~~~~~~lL~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~~~~Ll~~ 175 (301)
.. ..+++++|++.|++++.+|..|+||||+|++.|+.+++++|++.
T Consensus 90 ~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~ 136 (154)
T d1dcqa1 90 LTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 136 (154)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 66 66666666677777777777777777777777777777777775
No 38
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=3.9e-22 Score=152.87 Aligned_cols=123 Identities=18% Similarity=0.222 Sum_probs=108.0
Q ss_pred HHHHHHHhCCHHHHHHHHHcChhhhhhh---cCCCCCChHHHHHHHc---CCHHHHHHHHHhCCchhhhcCCCCCcHHHH
Q 022200 20 RLNEAAQAGNVDALYELIWEDAYLIDQI---DQVPFVDTHLHIAASM---GHVNFALEIMRLKPSFARKQNQYGCSPLHL 93 (301)
Q Consensus 20 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~ 93 (301)
.|+.|++.+++..+..++..|.+..... .....|+||||+|+.. |+.+++++|+++|+++ +.+|..|.||||+
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadi-n~~d~~g~TpLh~ 87 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHY 87 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCCh-hhhhhhhcccccc
Confidence 5789999999999999999988765432 1123589999999974 6789999999999876 8899999999999
Q ss_pred HHHCCCHHHHHHHhhcCCccceecCCCCCchhHHHHhc-HHHHHHHHHhCCc
Q 022200 94 ALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHYVAEN-VDLLYKFLTACPK 144 (301)
Q Consensus 94 A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~-~~~~~~lL~~~~~ 144 (301)
|+..|+.+++++|+++|++ ++.+|..|+||||+|+.. ..+++++|++.+.
T Consensus 88 A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~ 138 (154)
T d1dcqa1 88 CCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALS 138 (154)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ccccccccccccccccCcc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999999999999999999 899999999999999999 8888898887654
Done!