Your job contains 1 sequence.
>022203
MARNEEKAQSMLNRYIALQAEEKKKPKERRPYLASECRDLSEADKWRQQIMREIGRKVAE
IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP
SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV
EGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASVMGQVNEILKEGEEDVVLEERMR
EMEIERKEKEREFVVHVPLPDDKEIEKMVIERKKMELLKKYATEEFVEEQNEAKAMLNIQ
R
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022203
(301 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093964 - symbol:AT3G18790 "AT3G18790" species... 1027 1.1e-103 1
RGD|1307688 - symbol:Isy1 "ISY1 splicing factor homolog (... 596 5.1e-58 1
MGI|MGI:1923310 - symbol:Isy1 "ISY1 splicing factor homol... 595 6.6e-58 1
UNIPROTKB|Q9ULR0 - symbol:ISY1 "Pre-mRNA-splicing factor ... 593 1.1e-57 1
DICTYBASE|DDB_G0285521 - symbol:isy1 "ISY1-like protein" ... 524 4.2e-55 2
FB|FBgn0037550 - symbol:CG9667 species:7227 "Drosophila m... 556 8.9e-54 1
WB|WBGene00009966 - symbol:F53B7.3 species:6239 "Caenorha... 451 1.2e-42 1
UNIPROTKB|Q51LS1 - symbol:ISY1 "Pre-mRNA-splicing factor ... 375 1.9e-37 2
ASPGD|ASPL0000071699 - symbol:AN4707 species:162425 "Emer... 354 2.3e-32 1
POMBASE|SPBC32F12.05c - symbol:cwf12 "complexed with Cdc5... 263 1.0e-25 2
CGD|CAL0004135 - symbol:ISY1 species:5476 "Candida albica... 236 1.2e-24 2
UNIPROTKB|Q59R35 - symbol:ISY1 "Pre-mRNA-splicing factor ... 236 1.2e-24 2
GENEDB_PFALCIPARUM|PF14_0688 - symbol:PF14_0688 "hypothet... 280 1.6e-24 1
UNIPROTKB|Q8IKB8 - symbol:PF14_0688 "Pre-mRNA-splicing fa... 280 1.6e-24 1
SGD|S000003811 - symbol:ISY1 "Member of the NineTeen Comp... 165 3.2e-11 1
>TAIR|locus:2093964 [details] [associations]
symbol:AT3G18790 "AT3G18790" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] GO:GO:0005829 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AB026654 KO:K12870 eggNOG:NOG265652
InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246
HOGENOM:HOG000173970 OMA:RRYGPKM EMBL:AY065003 EMBL:AY090274
EMBL:AK118557 EMBL:AK318759 IPI:IPI00538702 RefSeq:NP_188509.1
UniGene:At.28288 ProteinModelPortal:Q9LS97 SMR:Q9LS97 IntAct:Q9LS97
PaxDb:Q9LS97 PRIDE:Q9LS97 EnsemblPlants:AT3G18790.1 GeneID:821412
KEGG:ath:AT3G18790 TAIR:At3g18790 InParanoid:Q9LS97
PhylomeDB:Q9LS97 ProtClustDB:CLSN2684534 Genevestigator:Q9LS97
Uniprot:Q9LS97
Length = 300
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 205/304 (67%), Positives = 233/304 (76%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARNEEKAQSMLNR+I + YLASECRDL+EADKWRQQI+REIG KVAE
Sbjct: 1 MARNEEKAQSMLNRFITQKESEKKKPKERRPYLASECRDLAEADKWRQQILREIGSKVAE 60
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQNEGLGEHRLRDLNDEINKL+RE+ HWERRI ELGG NY+KH AKMTDLEGNI+DVPNP
Sbjct: 61 IQNEGLGEHRLRDLNDEINKLLRERYHWERRIVELGGHNYSKHSAKMTDLEGNIIDVPNP 120
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180
SGRGPGYRYFGAAKKLPGVRELFEKPPELRKR+TRYDIYKRIDASYYGYRDDEDG+LE++
Sbjct: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRKTRYDIYKRIDASYYGYRDDEDGILEKL 180
Query: 181 EGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASV---MGQVNEILKEGXXXXXXXX 237
E +E MR ++V+EWRRLDE++KEA K + E SV E+L E
Sbjct: 181 ERKSEGGMRKRSVEEWRRLDEVRKEARKG--ASEVVSVGAAAAAAREVLFE--EEEDVVE 236
Query: 238 XXXXXXXXXXXXXXXXXXHVPLPDDKEIEKMVIERKKMELLKKYATEEFVEEQNEAKAML 297
HVPLPD+KEIEKMV+E+KKM+LL KYA+E+ VE+Q EAK+ML
Sbjct: 237 EERMEREKEEEKEREFVVHVPLPDEKEIEKMVLEKKKMDLLSKYASEDLVEQQTEAKSML 296
Query: 298 NIQR 301
NI R
Sbjct: 297 NIHR 300
>RGD|1307688 [details] [associations]
symbol:Isy1 "ISY1 splicing factor homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1307688
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 KO:K12870
eggNOG:NOG265652 InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246
HOGENOM:HOG000173970 CTD:57461 HOVERGEN:HBG061071 OrthoDB:EOG4DJJX6
GeneTree:ENSGT00390000014109 EMBL:BC079119 IPI:IPI00358370
RefSeq:NP_001014210.1 UniGene:Rn.25170 ProteinModelPortal:Q6AYB3
SMR:Q6AYB3 Ensembl:ENSRNOT00000013571 GeneID:362394 KEGG:rno:362394
UCSC:RGD:1307688 InParanoid:Q6AYB3 NextBio:679774
Genevestigator:Q6AYB3 GermOnline:ENSRNOG00000010021 Uniprot:Q6AYB3
Length = 284
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 134/297 (45%), Positives = 177/297 (59%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EKA + L R+ Q +LASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1 MARNAEKAMTALARFRQAQLEEGKVKERRP-FLASECTELPKAEKWRRQIIGEISKKVAQ 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN GLGE R+RDLNDEINKL+REKGHWE RI ELGGP+Y K KM D EG V P
Sbjct: 60 IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 115
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180
RG Y+YFGAAK LPGVRELFEK P R+TR ++ K ID YYGY D++DGV+ +
Sbjct: 116 GNRG--YKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 173
Query: 181 EGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASVMGQVNEILKEGXXXXXXXXXXX 240
E E+ +RA+ V++W+ E + + + EE + + + +E
Sbjct: 174 EQEYEKRLRAELVEKWKAEREARLARGEKEEEEEEEEI--NIYAVTEE------ESDEEG 225
Query: 241 XXXXXXXXXXXXXXXHVPLPDDKEIEKMVIERKKMELLKKYATEEFVEEQNEAKAML 297
HVP+P +EIE+ ++ RKKMELL+KYA+E + EAK +L
Sbjct: 226 SQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLL 282
>MGI|MGI:1923310 [details] [associations]
symbol:Isy1 "ISY1 splicing factor homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] MGI:MGI:1923310
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 KO:K12870
eggNOG:NOG265652 InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246
HOGENOM:HOG000173970 CTD:57461 HOVERGEN:HBG061071 OMA:RRYGPKM
OrthoDB:EOG4DJJX6 EMBL:AK173116 EMBL:AK017996 EMBL:BC020103
EMBL:BC037695 IPI:IPI00469994 RefSeq:NP_598695.1 UniGene:Mm.241546
PDB:1X4T PDBsum:1X4T ProteinModelPortal:Q69ZQ2 SMR:Q69ZQ2
PhosphoSite:Q69ZQ2 PaxDb:Q69ZQ2 PRIDE:Q69ZQ2
Ensembl:ENSMUST00000089497 GeneID:57905 KEGG:mmu:57905
UCSC:uc009cub.1 GeneTree:ENSGT00390000014109 InParanoid:Q69ZQ2
ChiTaRS:ISY1 EvolutionaryTrace:Q69ZQ2 NextBio:314069 Bgee:Q69ZQ2
CleanEx:MM_ISY1 Genevestigator:Q69ZQ2 GermOnline:ENSMUSG00000030056
Uniprot:Q69ZQ2
Length = 285
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 135/298 (45%), Positives = 178/298 (59%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EKA + L R+ Q +LASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1 MARNAEKAMTALARFRQAQLEEGKVKERRP-FLASECTELPKAEKWRRQIIGEISKKVAQ 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN GLGE R+RDLNDEINKL+REKGHWE RI ELGGP+Y K KM D EG V P
Sbjct: 60 IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 115
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180
RG Y+YFGAAK LPGVRELFEK P R+TR ++ K ID YYGY D++DGV+ +
Sbjct: 116 GNRG--YKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 173
Query: 181 EGPAEREMRAKAVQEWRRLDEIK-KEAMKTVKSGEEASVMGQVNEILKEGXXXXXXXXXX 239
E E+++RA+ V++W+ E + K + EE + + + +E
Sbjct: 174 EQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEI--NIYAVTEE------ESDEE 225
Query: 240 XXXXXXXXXXXXXXXXHVPLPDDKEIEKMVIERKKMELLKKYATEEFVEEQNEAKAML 297
HVP+P +EIE+ ++ RKKMELL+KYA+E + EAK +L
Sbjct: 226 GNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLL 283
>UNIPROTKB|Q9ULR0 [details] [associations]
symbol:ISY1 "Pre-mRNA-splicing factor ISY1 homolog"
species:9606 "Homo sapiens" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] GO:GO:0000398 GO:GO:0071013
eggNOG:COG1100 KO:K12870 InterPro:IPR009360 PANTHER:PTHR13021
Pfam:PF06246 HOGENOM:HOG000173970 EMBL:AB032986 EMBL:BC004442
EMBL:BC007409 EMBL:BC019849 IPI:IPI00063673 IPI:IPI00552736
IPI:IPI00744858 RefSeq:NP_001186398.1 RefSeq:NP_001191819.1
RefSeq:NP_065752.1 UniGene:Hs.512661 ProteinModelPortal:Q9ULR0
SMR:Q9ULR0 IntAct:Q9ULR0 STRING:Q9ULR0 PhosphoSite:Q9ULR0
DMDM:300669687 PaxDb:Q9ULR0 PRIDE:Q9ULR0 DNASU:57461
Ensembl:ENST00000273541 Ensembl:ENST00000393295 GeneID:100534599
GeneID:57461 KEGG:hsa:100534599 KEGG:hsa:57461 UCSC:uc003elo.2
UCSC:uc003elp.2 UCSC:uc010hta.2 CTD:100534599 CTD:57461
GeneCards:GC03M128807 GeneCards:GC03M128846 HGNC:HGNC:29201
HPA:HPA006312 HPA:HPA016995 MIM:612764 neXtProt:NX_Q9ULR0
PharmGKB:PA162392343 HOVERGEN:HBG061071 OMA:RRYGPKM
OrthoDB:EOG4DJJX6 NextBio:63656 Bgee:Q9ULR0 CleanEx:HS_ISY1
Genevestigator:Q9ULR0 GermOnline:ENSG00000172780 Uniprot:Q9ULR0
Length = 285
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 134/298 (44%), Positives = 178/298 (59%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EKA + L R+ Q +LASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1 MARNAEKAMTALARFRQAQLEEGKVKERRP-FLASECTELPKAEKWRRQIIGEISKKVAQ 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN GLGE R+RDLNDEINKL+REKGHWE RI ELGGP+Y K KM D EG V P
Sbjct: 60 IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 115
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180
RG Y+YFGAAK LPGVRELFEK P R+TR ++ K ID YYGY D++DGV+ +
Sbjct: 116 GNRG--YKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 173
Query: 181 EGPAEREMRAKAVQEWRRLDEIK-KEAMKTVKSGEEASVMGQVNEILKEGXXXXXXXXXX 239
E E+++RA+ V++W+ E + K + EE + + + +E
Sbjct: 174 EQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEI--NIYAVTEE------ESDEE 225
Query: 240 XXXXXXXXXXXXXXXXHVPLPDDKEIEKMVIERKKMELLKKYATEEFVEEQNEAKAML 297
HVP+P +EIE+ ++ RKKMELL+KYA+E + EA+ +L
Sbjct: 226 GSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLL 283
>DICTYBASE|DDB_G0285521 [details] [associations]
symbol:isy1 "ISY1-like protein" species:44689
"Dictyostelium discoideum" [GO:0005681 "spliceosomal complex"
evidence=IEA;ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
dictyBase:DDB_G0285521 GenomeReviews:CM000153_GR EMBL:AAFI02000079
GO:GO:0005681 GO:GO:0000398 KO:K12870 eggNOG:NOG265652
InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246
RefSeq:XP_638102.1 HSSP:Q69ZQ2 ProteinModelPortal:Q54N41 SMR:Q54N41
EnsemblProtists:DDB0233583 GeneID:8625150 KEGG:ddi:DDB_G0285521
Uniprot:Q54N41
Length = 299
Score = 524 (189.5 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 104/201 (51%), Positives = 136/201 (67%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARNEEKA+SMLNRY+ L+ YL++EC L +A+KWR+QI++EI R + E
Sbjct: 1 MARNEEKAKSMLNRYLQLKGTESKQEERRP-YLSNECDSLVDAEKWRRQILKEITRGITE 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN L E+++RDLND INKL+REKGHWERRI +LGGPN+ K+ D +G P
Sbjct: 60 IQNSALDEYKIRDLNDHINKLVREKGHWERRILQLGGPNHRALAPKLFDADGK-----EP 114
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPEL---RKRRTRYDIYKRIDASYYGYRDDEDGVL 177
G G YRY+G AK LPGV ELFEKP + +++TR D+YK ID+ YYGYRDDEDG L
Sbjct: 115 LGTGT-YRYYGEAKNLPGVAELFEKPEQTLHGTEKKTRQDLYKYIDSDYYGYRDDEDGKL 173
Query: 178 ERVEGPAEREMRAKAVQEWRR 198
E +E E+ + V+ W++
Sbjct: 174 EEIEREYEKYAIEQNVENWKK 194
Score = 62 (26.9 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 256 HVPLPDDKEIEKMVIERKKMELLKKY 281
+V LP +IE +++E++K EL K+Y
Sbjct: 271 YVSLPSTSQIETILLEKRKEELRKRY 296
>FB|FBgn0037550 [details] [associations]
symbol:CG9667 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] EMBL:AE014297
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K12870
eggNOG:NOG265652 InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246
OMA:RRYGPKM GeneTree:ENSGT00390000014109 EMBL:AY084151
RefSeq:NP_649768.2 UniGene:Dm.5211 SMR:Q9VHV6
EnsemblMetazoa:FBtr0081815 GeneID:40960 KEGG:dme:Dmel_CG9667
UCSC:CG9667-RA FlyBase:FBgn0037550 InParanoid:Q9VHV6
OrthoDB:EOG4FBG8S GenomeRNAi:40960 NextBio:821473 Uniprot:Q9VHV6
Length = 272
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 125/285 (43%), Positives = 170/285 (59%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EKA + L R+ A + YLASEC DL +K+R +I+R+I +KVA+
Sbjct: 1 MARNAEKAMTTLARWRAAKEVESGEKERRP-YLASECHDLPRCEKFRLEIIRDISKKVAQ 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN GLGE R+RDLNDEINKL+REK HWE +I LGGP+Y ++ KM D EG V P
Sbjct: 60 IQNAGLGEFRIRDLNDEINKLLREKRHWENQISSLGGPHYRRYGPKMFDAEGREV----P 115
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180
RG Y+YFGAAK LPGVRELFE+ P R++R ++ K IDA YYGYRDDEDGVL +
Sbjct: 116 GNRG--YKYFGAAKDLPGVRELFEQDPPPPPRKSRAELMKDIDAEYYGYRDDEDGVLIPL 173
Query: 181 EGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASVM---GQVNEILKEGXXXXXXXX 237
E ER KAVQEWR +++ ++ + + EE + G E +++
Sbjct: 174 EERIERAAIQKAVQEWR--EKMARDG-RIIDDEEEDEIYPLSGPAREAIEDAKARAAVED 230
Query: 238 XXXXXXXXXXXXXXXXXXHVPLPDDKEIEKMVIERKKMELLKKYA 282
HVP+P +++++ ++ ++K ELL+KYA
Sbjct: 231 PHGLLASKFTA-------HVPVPTQQDVQEALLRQRKRELLEKYA 268
>WB|WBGene00009966 [details] [associations]
symbol:F53B7.3 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0008406
"gonad development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] GO:GO:0009792 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0018996 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 KO:K12870 eggNOG:NOG265652
InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246
HOGENOM:HOG000173970 OMA:RRYGPKM GeneTree:ENSGT00390000014109
EMBL:Z72510 PIR:T22548 RefSeq:NP_505803.1 ProteinModelPortal:Q20716
SMR:Q20716 IntAct:Q20716 STRING:Q20716 PaxDb:Q20716
EnsemblMetazoa:F53B7.3.1 EnsemblMetazoa:F53B7.3.2
EnsemblMetazoa:F53B7.3.3 GeneID:179524 KEGG:cel:CELE_F53B7.3
UCSC:F53B7.3 CTD:179524 WormBase:F53B7.3 InParanoid:Q20716
NextBio:905780 Uniprot:Q20716
Length = 267
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 112/283 (39%), Positives = 157/283 (55%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EKA + L R+ ++ + +CR+LS+A+++R++I+R+ +K+
Sbjct: 1 MARNAEKAMTALARWRRMKEEEERGPIARRPHDVKDCRNLSDAERFRREIVRDASKKITA 60
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN GLGE +LRDLNDE+N+LI+ K WE+RI ELGG +Y K+ K D G
Sbjct: 61 IQNPGLGEFKLRDLNDEVNRLIKLKHAWEQRIRELGGTDYRKYAQKELDAIGR------E 114
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPE-LRKRRTRYDIYKRIDASYYGYRDDEDGVLER 179
+G GY+YFGAAK LPGVRELFEK E +RR R D+ + IDA Y+GY DDEDG L
Sbjct: 115 TGNSRGYKYFGAAKDLPGVRELFEKSTEGEEQRRHRADLLRNIDAHYFGYLDDEDGRLIP 174
Query: 180 VEGPAEREMRAKAVQEWRRLDEIKKE-AMKTVKSGEEASVMGQVNEILKEGXXXXXXXXX 238
+E K ++E + ++ I KE A K + + AS N I K
Sbjct: 175 LE---------KLIEE-KNIERINKEFAEKQAQKQQTASDAAPEN-IYKV-EEDDDDDLE 222
Query: 239 XXXXXXXXXXXXXXXXXHVPLPDDKEIEKMVIERKKMELLKKY 281
HV LP ++IE+M++E+KK EL+ KY
Sbjct: 223 TQESTVIGEDGRPMTIRHVLLPTQQDIEEMLLEQKKQELMAKY 265
>UNIPROTKB|Q51LS1 [details] [associations]
symbol:ISY1 "Pre-mRNA-splicing factor ISY1" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 EMBL:CM000230 EMBL:CM001237 KO:K12870
eggNOG:NOG265652 InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246
OrthoDB:EOG45MRFD RefSeq:XP_003720918.1 ProteinModelPortal:Q51LS1
STRING:Q51LS1 EnsemblFungi:MGG_02820T0 GeneID:2682373
KEGG:mgr:MGG_02820 Uniprot:Q51LS1
Length = 246
Score = 375 (137.1 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 88/196 (44%), Positives = 116/196 (59%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXY---LASECRDLSEADKWRQQIMREIGRK 57
MARN EKAQSML R+ QA +E + +KWR Q++++I RK
Sbjct: 1 MARNSEKAQSMLFRFREAQAADLGIIDAGRTRRPRAITEQDSIPACEKWRGQVLKDISRK 60
Query: 58 VAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHF-AKMTDLEGNIVD 116
V+ IQ L ++++RDLNDEINKL+REK WE +I LGGPNYT+ AK+ D G +
Sbjct: 61 VSRIQESSLSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYTRAGGAKVYDEAGKEI- 119
Query: 117 VPNPSGRGPGYRYFGAAKKLPGVRELFE----KPPELRKRRTRYDIYKRIDASYYGYR-D 171
G G GYRYFG AK+LPGV+ELFE K + + R D+ K++DA+YYGY D
Sbjct: 120 ----GGAGRGYRYFGRAKELPGVKELFEAARAKKGDEKPLEARDDLRKQVDAAYYGYSPD 175
Query: 172 DEDGVLERVEGPAERE 187
+ED L E E+E
Sbjct: 176 EEDDELLAYEAAKEKE 191
Score = 43 (20.2 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 259 LPDDKEIEKMVIERKKMELLKK 280
LP +E+++ +I R+K LL +
Sbjct: 224 LPTVEEVQQELINRRKQRLLNQ 245
>ASPGD|ASPL0000071699 [details] [associations]
symbol:AN4707 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 EMBL:BN001303 EMBL:AACD01000080
KO:K12870 eggNOG:NOG265652 InterPro:IPR009360 PANTHER:PTHR13021
Pfam:PF06246 RefSeq:XP_662311.1 ProteinModelPortal:Q5B423
STRING:Q5B423 EnsemblFungi:CADANIAT00005723 GeneID:2872497
KEGG:ani:AN4707.2 HOGENOM:HOG000173970 OMA:CEKWRGQ
OrthoDB:EOG45MRFD Uniprot:Q5B423
Length = 256
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 88/220 (40%), Positives = 124/220 (56%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXY---LASECRDLSEADKWRQQIMREIGRK 57
MARN EKAQSML R+ A QA + + +KWR Q+++EI RK
Sbjct: 1 MARNSEKAQSMLFRFRAQQAADLGIIDIGRTRRPKAITSVDSIPACEKWRGQVLKEISRK 60
Query: 58 VAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDV 117
V+ IQ L +H++RDLNDEINKL+REK WE +I +GGPNY + ++ D EG ++
Sbjct: 61 VSRIQEPSLSDHQIRDLNDEINKLMREKWAWEMQIRNMGGPNYMRGSGRVYDDEGR--EI 118
Query: 118 PNPSGRGPGYRYFGAAKKLPGVRELFEK-------PPELRKRRTRY-----DIY-KRIDA 164
P G G GYRYFG A++LPGV+E+ E P E + + DI K++DA
Sbjct: 119 P---GGGKGYRYFGRARELPGVKEMLEAAARRGRGPAEEEEDDGKTVGRGGDIATKKVDA 175
Query: 165 SYYGYR-DDEDGVLERVEGPAEREMRAKAVQEWRRLDEIK 203
+Y+GY D+EDG L E E+E K +E ++++
Sbjct: 176 NYFGYGLDEEDGTLLAYEMQREKEAVEKLRKEGEDEEDVE 215
>POMBASE|SPBC32F12.05c [details] [associations]
symbol:cwf12 "complexed with Cdc5 protein Cwf12"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] PomBase:SPBC32F12.05c GO:GO:0005829
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0045292
KO:K12870 eggNOG:NOG265652 InterPro:IPR009360 PANTHER:PTHR13021
Pfam:PF06246 HOGENOM:HOG000173970 OrthoDB:EOG45MRFD PIR:T40229
RefSeq:NP_596148.1 ProteinModelPortal:O74370 IntAct:O74370
STRING:O74370 EnsemblFungi:SPBC32F12.05c.1 GeneID:2540230
KEGG:spo:SPBC32F12.05c OMA:PSLNEMQ NextBio:20801361 Uniprot:O74370
Length = 217
Score = 263 (97.6 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 69/189 (36%), Positives = 112/189 (59%)
Query: 44 DKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKH 103
+K R ++++I RK++ IQ+ L E+++RDLND IN+L+REK WE +I +LGG NY +
Sbjct: 30 EKHRASVVKDISRKISRIQSATLPEYQIRDLNDAINRLMREKHEWEVQIRDLGGINYLYN 89
Query: 104 FAKMTDLEGN-IVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPE-LRKRRTRYDIYKR 161
AK+ + EG I D+ + YRY+G A++LPGV+ELFE + +R+ + ++ KR
Sbjct: 90 KAKLFEDEGEQISDIDD-------YRYYGRARELPGVKELFEADMSFIPERQRKQEMQKR 142
Query: 162 -IDASYYGYRDD-EDGVLERVEGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASVM 219
+DA Y+GY ++ +LE E E E + K ++ DE++++ V E+
Sbjct: 143 RLDAWYFGYIPPAQESLLEDFEAKIE-EQQHKHLENLG--DEVEQDWKPLVI--EQIPTR 197
Query: 220 GQVNEILKE 228
V IL E
Sbjct: 198 DDVEAILLE 206
Score = 43 (20.2 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 257 VPLPDDKEIEKMVIERKKMELLKK 280
+P DD +E +++ER+K LL +
Sbjct: 194 IPTRDD--VEAILLERRKNALLSR 215
>CGD|CAL0004135 [details] [associations]
symbol:ISY1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0071007 "U2-type
catalytic step 2 spliceosome" evidence=IEA] [GO:0071020
"post-spliceosomal complex" evidence=IEA] [GO:0071006 "U2-type
catalytic step 1 spliceosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0071014
"post-mRNA release spliceosomal complex" evidence=IEA] [GO:0000384
"first spliceosomal transesterification activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] [GO:0000389 "mRNA 3'-splice
site recognition" evidence=IEA] CGD:CAL0004135 GO:GO:0005737
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0035690
EMBL:AP006852 KO:K12870 EMBL:AACQ01000166 EMBL:AACQ01000167
RefSeq:XP_712113.1 RefSeq:XP_712138.1 RefSeq:XP_888959.1
ProteinModelPortal:Q59R35 STRING:Q59R35 GeneID:3646233
GeneID:3646250 GeneID:3704002 KEGG:cal:CaO19.13977
KEGG:cal:CaO19.6685 KEGG:cal:CaO19_6685 eggNOG:NOG265652
InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246 Uniprot:Q59R35
Length = 266
Score = 236 (88.1 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 59/161 (36%), Positives = 88/161 (54%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYL-ASECRDLSEADKWRQQIMREIGRKVA 59
M+RN+EKAQS LNR+ Q+ LS+A+ WR+ I+ EI +++
Sbjct: 1 MSRNKEKAQSSLNRFYQSQSSAPINYHYHQRPKNIHSITQLSQAEGWRRSIIGEISKQLT 60
Query: 60 EIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFE-LGGPNYTKHFAKM-TDLEGNIVDV 117
EI + + + ++R+LND++N+L EK WE I + L G +Y +H DL + V
Sbjct: 61 EINDFEISDIKVRELNDQLNELFNEKRRWEYHIRDKLHGNDYIRHNGNTKNDLINTGIRV 120
Query: 118 PNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDI 158
N S +G YRYFG AK LP V+ + E+ + RK R DI
Sbjct: 121 NN-SDKGKYYRYFGRAKDLPEVKLMIEENKKNRKNHKRDDI 160
Score = 60 (26.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 151 KRRTRYDIYKR----IDASYYGYRDDED 174
KRR + D YK ID +YYG+ D+E+
Sbjct: 167 KRRRKVDQYKSTDNSIDMNYYGFYDEEE 194
>UNIPROTKB|Q59R35 [details] [associations]
symbol:ISY1 "Pre-mRNA-splicing factor ISY1" species:237561
"Candida albicans SC5314" [GO:0035690 "cellular response to drug"
evidence=IMP] CGD:CAL0004135 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 GO:GO:0035690 EMBL:AP006852 KO:K12870
EMBL:AACQ01000166 EMBL:AACQ01000167 RefSeq:XP_712113.1
RefSeq:XP_712138.1 RefSeq:XP_888959.1 ProteinModelPortal:Q59R35
STRING:Q59R35 GeneID:3646233 GeneID:3646250 GeneID:3704002
KEGG:cal:CaO19.13977 KEGG:cal:CaO19.6685 KEGG:cal:CaO19_6685
eggNOG:NOG265652 InterPro:IPR009360 PANTHER:PTHR13021 Pfam:PF06246
Uniprot:Q59R35
Length = 266
Score = 236 (88.1 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 59/161 (36%), Positives = 88/161 (54%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYL-ASECRDLSEADKWRQQIMREIGRKVA 59
M+RN+EKAQS LNR+ Q+ LS+A+ WR+ I+ EI +++
Sbjct: 1 MSRNKEKAQSSLNRFYQSQSSAPINYHYHQRPKNIHSITQLSQAEGWRRSIIGEISKQLT 60
Query: 60 EIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFE-LGGPNYTKHFAKM-TDLEGNIVDV 117
EI + + + ++R+LND++N+L EK WE I + L G +Y +H DL + V
Sbjct: 61 EINDFEISDIKVRELNDQLNELFNEKRRWEYHIRDKLHGNDYIRHNGNTKNDLINTGIRV 120
Query: 118 PNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDI 158
N S +G YRYFG AK LP V+ + E+ + RK R DI
Sbjct: 121 NN-SDKGKYYRYFGRAKDLPEVKLMIEENKKNRKNHKRDDI 160
Score = 60 (26.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 151 KRRTRYDIYKR----IDASYYGYRDDED 174
KRR + D YK ID +YYG+ D+E+
Sbjct: 167 KRRRKVDQYKSTDNSIDMNYYGFYDEEE 194
>GENEDB_PFALCIPARUM|PF14_0688 [details] [associations]
symbol:PF14_0688 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014187 KO:K12870 InterPro:IPR009360 PANTHER:PTHR13021
Pfam:PF06246 HOGENOM:HOG000173970 RefSeq:XP_001348862.1
ProteinModelPortal:Q8IKB8 EnsemblProtists:PF14_0688:mRNA
GeneID:812270 KEGG:pfa:PF14_0688 EuPathDB:PlasmoDB:PF3D7_1472000
OMA:CDEANEH ProtClustDB:CLSZ2733876 Uniprot:Q8IKB8
Length = 201
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 72/196 (36%), Positives = 109/196 (55%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EK +SMLN++I + E +L +A K+R I++E+ +K+ E
Sbjct: 1 MARNVEKGKSMLNQWIKAKEISDKREFFKIPKNIDEVENLDDALKYRIYIIKEMCKKIKE 60
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNI-VDVPN 119
IQN L + +R+LND+INKLI K WE RI ELGG +Y+K E N+ ++ +
Sbjct: 61 IQNHSLSDQHIRELNDQINKLIFIKNKWEARIVELGGRDYSK--------ESNLLINAHS 112
Query: 120 PSGRGPG-YRYFGAAKKLPGVRELFEKPPE------LRKRRTRYDIYKRIDASYYGYRDD 172
RG Y+YFGAAK L GVREL K E ++K++ + K I+ Y+GY D+
Sbjct: 113 SELRGSSNYKYFGAAKNLKGVRELLFKENEDKKQLNIKKKKDARNFEKVINIHYFGYCDE 172
Query: 173 EDGVLERVEGPAEREM 188
+ L + E ++++
Sbjct: 173 ANEHLLQQEVKIQKKL 188
>UNIPROTKB|Q8IKB8 [details] [associations]
symbol:PF14_0688 "Pre-mRNA-splicing factor ISY1 homolog,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014187 KO:K12870 InterPro:IPR009360 PANTHER:PTHR13021
Pfam:PF06246 HOGENOM:HOG000173970 RefSeq:XP_001348862.1
ProteinModelPortal:Q8IKB8 EnsemblProtists:PF14_0688:mRNA
GeneID:812270 KEGG:pfa:PF14_0688 EuPathDB:PlasmoDB:PF3D7_1472000
OMA:CDEANEH ProtClustDB:CLSZ2733876 Uniprot:Q8IKB8
Length = 201
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 72/196 (36%), Positives = 109/196 (55%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EK +SMLN++I + E +L +A K+R I++E+ +K+ E
Sbjct: 1 MARNVEKGKSMLNQWIKAKEISDKREFFKIPKNIDEVENLDDALKYRIYIIKEMCKKIKE 60
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNI-VDVPN 119
IQN L + +R+LND+INKLI K WE RI ELGG +Y+K E N+ ++ +
Sbjct: 61 IQNHSLSDQHIRELNDQINKLIFIKNKWEARIVELGGRDYSK--------ESNLLINAHS 112
Query: 120 PSGRGPG-YRYFGAAKKLPGVRELFEKPPE------LRKRRTRYDIYKRIDASYYGYRDD 172
RG Y+YFGAAK L GVREL K E ++K++ + K I+ Y+GY D+
Sbjct: 113 SELRGSSNYKYFGAAKNLKGVRELLFKENEDKKQLNIKKKKDARNFEKVINIHYFGYCDE 172
Query: 173 EDGVLERVEGPAEREM 188
+ L + E ++++
Sbjct: 173 ANEHLLQQEVKIQKKL 188
>SGD|S000003811 [details] [associations]
symbol:ISY1 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IC] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IMP] [GO:0000384 "first spliceosomal transesterification
activity" evidence=IGI] [GO:0071007 "U2-type catalytic step 2
spliceosome" evidence=IDA] [GO:0071020 "post-spliceosomal complex"
evidence=IDA] [GO:0071014 "post-mRNA release spliceosomal complex"
evidence=IDA] [GO:0000350 "generation of catalytic spliceosome for
second transesterification step" evidence=IMP] [GO:0000974 "Prp19
complex" evidence=IDA] SGD:S000003811 GO:GO:0005737 EMBL:BK006943
EMBL:L36344 RefSeq:NP_012587.3 GeneID:853513 KEGG:sce:YJR053W
KO:K02181 GO:GO:0000974 GO:GO:0071006 GO:GO:0071007 EMBL:M37696
EMBL:L26347 RefSeq:NP_012584.3 GeneID:853509 KEGG:sce:YJR050W
KO:K12870 eggNOG:NOG265652 InterPro:IPR009360 PANTHER:PTHR13021
Pfam:PF06246 HOGENOM:HOG000173970 OrthoDB:EOG45MRFD
GeneTree:ENSGT00390000014109 OMA:PSLNEMQ EMBL:Z49550 EMBL:AY558078
PIR:S46590 ProteinModelPortal:P21374 SMR:P21374 DIP:DIP-1682N
IntAct:P21374 MINT:MINT-385948 STRING:P21374 PaxDb:P21374
EnsemblFungi:YJR050W CYGD:YJR050w NextBio:974168
Genevestigator:P21374 GermOnline:YJR050W GO:GO:0071014
GO:GO:0071020 GO:GO:0000350 GO:GO:0000389 Uniprot:P21374
Length = 235
Score = 165 (63.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 47/145 (32%), Positives = 74/145 (51%)
Query: 1 MARNEEKAQSMLNRYIALQAXXXXXXXXXXXYL----ASECRDLSEADKWRQQIMREIGR 56
M+RN +KA S+L R+ QA Y S+ + + EA++W++Q+ +EI +
Sbjct: 1 MSRNVDKANSVLVRFQEQQAESAGGYKDYSRYQRPRNVSKVKSIKEANEWKRQVSKEIKQ 60
Query: 57 KVAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVD 116
K I + L E ++ +LNDE+N L +E W+R + + K K LE + V
Sbjct: 61 KSTRIYDPSLNEMQIAELNDELNNLFKE---WKRWQWHIDHTLMEKK-TKRKRLEDSHV- 115
Query: 117 VPNPSGRGPGYRYFGAAKKLPGVRE 141
+ N G RYFG A +LP V+E
Sbjct: 116 LMNSGKLINGKRYFGRALELPEVKE 140
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 301 264 0.00092 114 3 11 23 0.39 34
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 593 (63 KB)
Total size of DFA: 189 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.67u 0.11s 23.78t Elapsed: 00:00:02
Total cpu time: 23.67u 0.11s 23.78t Elapsed: 00:00:02
Start: Sat May 11 10:23:05 2013 End: Sat May 11 10:23:07 2013