Query 022210
Match_columns 301
No_of_seqs 201 out of 1160
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 08:51:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022210.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022210hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 1.6E-47 3.5E-52 355.6 12.2 171 129-299 76-262 (262)
2 PF03031 NIF: NLI interacting 100.0 3E-39 6.5E-44 275.7 15.3 148 143-290 1-159 (159)
3 TIGR02251 HIF-SF_euk Dullard-l 100.0 5.4E-39 1.2E-43 278.6 15.4 147 142-288 1-162 (162)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 2.1E-38 4.5E-43 284.0 14.8 158 139-298 18-193 (195)
5 KOG2832 TFIIF-interacting CTD 100.0 9.9E-36 2.1E-40 284.2 12.6 170 125-296 169-343 (393)
6 TIGR02250 FCP1_euk FCP1-like p 100.0 5.6E-30 1.2E-34 221.8 12.9 124 139-265 3-154 (156)
7 COG5190 FCP1 TFIIF-interacting 100.0 1.8E-28 3.8E-33 238.6 11.7 165 131-296 200-381 (390)
8 smart00577 CPDc catalytic doma 99.9 4E-24 8.7E-29 182.2 13.7 131 141-271 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.7 8.4E-17 1.8E-21 164.9 10.9 99 163-264 196-296 (635)
10 COG5190 FCP1 TFIIF-interacting 98.1 2.1E-06 4.6E-11 84.6 3.6 100 162-263 70-172 (390)
11 cd01427 HAD_like Haloacid deha 97.8 2.4E-05 5.3E-10 61.8 4.9 106 144-251 1-126 (139)
12 TIGR01681 HAD-SF-IIIC HAD-supe 97.6 3.8E-05 8.2E-10 64.0 2.8 106 143-250 1-120 (128)
13 PHA03398 viral phosphatase sup 97.5 0.00084 1.8E-08 64.5 10.3 122 140-270 126-283 (303)
14 TIGR01662 HAD-SF-IIIA HAD-supe 97.3 0.00033 7.2E-09 57.6 4.9 104 143-251 1-117 (132)
15 TIGR01685 MDP-1 magnesium-depe 97.2 0.001 2.2E-08 59.0 7.2 98 165-264 42-156 (174)
16 TIGR01684 viral_ppase viral ph 97.2 0.001 2.2E-08 63.8 7.3 122 140-270 124-281 (301)
17 PHA02530 pseT polynucleotide k 97.1 0.00039 8.5E-09 64.9 3.4 122 140-261 156-292 (300)
18 TIGR01686 FkbH FkbH-like domai 97.0 0.0012 2.7E-08 63.0 5.8 107 141-251 2-116 (320)
19 TIGR00213 GmhB_yaeD D,D-heptos 97.0 0.0026 5.7E-08 55.3 7.4 114 143-260 2-145 (176)
20 PRK08942 D,D-heptose 1,7-bisph 96.9 0.0029 6.3E-08 55.1 6.8 107 142-251 3-133 (181)
21 PF13419 HAD_2: Haloacid dehal 96.8 0.0027 5.8E-08 52.6 5.9 85 166-251 75-163 (176)
22 TIGR02253 CTE7 HAD superfamily 96.6 0.0033 7.2E-08 55.5 4.9 82 166-248 92-177 (221)
23 TIGR01656 Histidinol-ppas hist 96.6 0.0042 9.2E-08 52.5 5.3 106 143-251 1-131 (147)
24 TIGR01261 hisB_Nterm histidino 96.3 0.007 1.5E-07 52.7 5.5 117 143-262 2-144 (161)
25 TIGR02254 YjjG/YfnB HAD superf 96.3 0.0076 1.6E-07 53.1 5.6 81 167-248 96-180 (224)
26 TIGR01509 HAD-SF-IA-v3 haloaci 96.3 0.0067 1.5E-07 51.5 5.0 83 167-251 84-170 (183)
27 PRK13288 pyrophosphatase PpaX; 96.2 0.007 1.5E-07 53.6 4.7 94 166-260 80-177 (214)
28 TIGR01449 PGP_bact 2-phosphogl 96.2 0.0058 1.3E-07 53.6 4.0 94 166-260 83-180 (213)
29 TIGR01454 AHBA_synth_RP 3-amin 96.1 0.0073 1.6E-07 53.1 4.5 95 166-261 73-171 (205)
30 PLN03243 haloacid dehalogenase 96.1 0.0055 1.2E-07 57.2 3.9 93 167-260 108-204 (260)
31 TIGR01993 Pyr-5-nucltdase pyri 96.0 0.0032 6.9E-08 54.5 1.8 82 167-251 83-171 (184)
32 PLN02770 haloacid dehalogenase 95.9 0.0079 1.7E-07 55.2 4.0 94 167-261 107-204 (248)
33 TIGR01428 HAD_type_II 2-haloal 95.9 0.017 3.8E-07 50.4 5.6 83 168-251 92-178 (198)
34 PF05152 DUF705: Protein of un 95.8 0.036 7.9E-07 53.0 8.0 123 140-270 120-277 (297)
35 TIGR00338 serB phosphoserine p 95.8 0.012 2.5E-07 52.2 4.3 94 167-261 84-191 (219)
36 PRK09449 dUMP phosphatase; Pro 95.8 0.017 3.7E-07 51.3 5.2 82 167-249 94-179 (224)
37 TIGR01689 EcbF-BcbF capsule bi 95.7 0.033 7.2E-07 47.1 6.7 72 143-218 2-87 (126)
38 PRK05446 imidazole glycerol-ph 95.7 0.034 7.3E-07 54.7 7.3 117 141-260 1-143 (354)
39 TIGR01668 YqeG_hyp_ppase HAD s 95.6 0.016 3.4E-07 50.4 4.4 96 139-249 22-119 (170)
40 TIGR01664 DNA-3'-Pase DNA 3'-p 95.6 0.083 1.8E-06 46.1 8.8 104 141-248 12-137 (166)
41 PF12689 Acid_PPase: Acid Phos 95.5 0.032 7E-07 49.4 5.9 106 142-251 3-137 (169)
42 PRK13222 phosphoglycolate phos 95.5 0.03 6.6E-07 49.4 5.7 86 167-253 92-181 (226)
43 TIGR02009 PGMB-YQAB-SF beta-ph 95.4 0.0094 2E-07 51.0 2.3 90 167-259 87-180 (185)
44 PRK06769 hypothetical protein; 95.3 0.032 7E-07 48.6 5.3 106 142-251 4-123 (173)
45 PRK10725 fructose-1-P/6-phosph 95.3 0.014 3.1E-07 50.1 3.0 89 169-259 89-180 (188)
46 KOG3109 Haloacid dehalogenase- 95.2 0.027 5.9E-07 52.2 4.7 83 167-251 99-191 (244)
47 PRK13226 phosphoglycolate phos 95.2 0.045 9.7E-07 49.4 6.1 86 166-252 93-182 (229)
48 PRK09456 ?-D-glucose-1-phospha 95.2 0.016 3.6E-07 50.9 3.1 98 167-264 83-184 (199)
49 TIGR01422 phosphonatase phosph 95.2 0.04 8.7E-07 50.2 5.8 94 167-260 98-196 (253)
50 PRK10826 2-deoxyglucose-6-phos 95.1 0.024 5.2E-07 50.6 3.9 94 167-261 91-188 (222)
51 PRK11587 putative phosphatase; 95.0 0.056 1.2E-06 48.2 6.1 93 166-260 81-177 (218)
52 TIGR01491 HAD-SF-IB-PSPlk HAD- 95.0 0.047 1E-06 47.2 5.4 84 167-251 79-176 (201)
53 PRK14988 GMP/IMP nucleotidase; 95.0 0.031 6.8E-07 50.6 4.3 93 167-260 92-188 (224)
54 TIGR01670 YrbI-phosphatas 3-de 94.9 0.038 8.3E-07 47.3 4.6 108 143-260 2-114 (154)
55 PLN02575 haloacid dehalogenase 94.9 0.033 7E-07 55.3 4.7 86 167-253 215-304 (381)
56 COG0637 Predicted phosphatase/ 94.6 0.03 6.4E-07 50.8 3.3 84 167-251 85-172 (221)
57 TIGR01549 HAD-SF-IA-v1 haloaci 94.6 0.1 2.2E-06 43.5 6.3 77 169-249 65-145 (154)
58 COG1011 Predicted hydrolase (H 94.6 0.068 1.5E-06 47.1 5.4 84 167-251 98-184 (229)
59 TIGR01548 HAD-SF-IA-hyp1 haloa 94.5 0.092 2E-06 46.0 6.1 80 169-249 107-189 (197)
60 PRK13223 phosphoglycolate phos 94.2 0.054 1.2E-06 50.6 4.2 92 167-259 100-195 (272)
61 TIGR02252 DREG-2 REG-2-like, H 94.2 0.092 2E-06 45.9 5.3 79 168-248 105-187 (203)
62 COG4996 Predicted phosphatase 94.1 0.32 7E-06 42.1 8.3 133 144-281 2-159 (164)
63 TIGR03351 PhnX-like phosphonat 94.0 0.1 2.3E-06 46.1 5.5 94 167-260 86-185 (220)
64 TIGR01663 PNK-3'Pase polynucle 94.0 0.21 4.6E-06 51.6 8.2 105 140-248 166-294 (526)
65 PRK13478 phosphonoacetaldehyde 93.9 0.11 2.3E-06 48.0 5.4 93 167-259 100-197 (267)
66 TIGR03333 salvage_mtnX 2-hydro 93.8 0.18 3.9E-06 45.0 6.5 86 167-252 69-170 (214)
67 PLN02779 haloacid dehalogenase 93.7 0.082 1.8E-06 49.9 4.4 93 167-260 143-241 (286)
68 PHA02597 30.2 hypothetical pro 93.7 0.065 1.4E-06 46.8 3.5 96 166-263 72-172 (197)
69 PRK09552 mtnX 2-hydroxy-3-keto 93.6 0.28 6E-06 43.9 7.5 95 167-261 73-183 (219)
70 TIGR02247 HAD-1A3-hyp Epoxide 93.5 0.064 1.4E-06 47.3 3.1 95 166-261 92-192 (211)
71 PRK10563 6-phosphogluconate ph 93.5 0.067 1.4E-06 47.5 3.3 92 167-261 87-182 (221)
72 PRK13225 phosphoglycolate phos 93.5 0.11 2.3E-06 49.0 4.8 93 167-260 141-234 (273)
73 PRK11133 serB phosphoserine ph 93.5 0.12 2.5E-06 50.1 5.1 86 167-253 180-279 (322)
74 TIGR01544 HAD-SF-IE haloacid d 93.4 0.17 3.7E-06 48.2 6.0 105 166-271 119-248 (277)
75 PLN02940 riboflavin kinase 93.1 0.1 2.3E-06 51.3 4.2 84 167-251 92-180 (382)
76 TIGR01672 AphA HAD superfamily 92.6 0.33 7.1E-06 45.1 6.5 109 140-253 61-199 (237)
77 TIGR01990 bPGM beta-phosphoglu 92.4 0.11 2.4E-06 44.3 2.9 82 168-252 87-172 (185)
78 PRK11009 aphA acid phosphatase 91.8 0.41 8.9E-06 44.5 6.1 106 139-252 60-198 (237)
79 TIGR01691 enolase-ppase 2,3-di 91.7 0.3 6.6E-06 44.7 5.0 85 167-251 94-182 (220)
80 PRK08238 hypothetical protein; 91.6 0.62 1.3E-05 47.6 7.7 89 168-262 72-165 (479)
81 TIGR01493 HAD-SF-IA-v2 Haloaci 91.4 0.063 1.4E-06 45.7 0.3 76 167-249 89-167 (175)
82 PRK09484 3-deoxy-D-manno-octul 91.3 0.53 1.1E-05 41.4 6.0 111 140-260 19-134 (183)
83 TIGR01489 DKMTPPase-SF 2,3-dik 91.2 0.4 8.8E-06 40.7 5.1 49 167-216 71-120 (188)
84 PLN02919 haloacid dehalogenase 90.7 0.38 8.3E-06 53.5 5.6 91 169-259 162-256 (1057)
85 PLN02811 hydrolase 90.7 0.22 4.9E-06 44.5 3.2 93 167-260 77-179 (220)
86 PRK13582 thrH phosphoserine ph 90.5 0.25 5.5E-06 43.1 3.2 83 167-253 67-159 (205)
87 TIGR01533 lipo_e_P4 5'-nucleot 90.3 0.42 9.1E-06 45.2 4.7 104 140-251 73-201 (266)
88 PRK06698 bifunctional 5'-methy 90.1 0.47 1E-05 47.6 5.2 90 167-259 329-421 (459)
89 TIGR01488 HAD-SF-IB Haloacid D 89.8 1.1 2.3E-05 37.9 6.4 48 167-215 72-120 (177)
90 PF09419 PGP_phosphatase: Mito 89.5 1.1 2.3E-05 39.9 6.3 101 137-248 36-146 (168)
91 COG0241 HisB Histidinol phosph 89.2 0.93 2E-05 40.7 5.8 124 142-267 5-154 (181)
92 TIGR01459 HAD-SF-IIA-hyp4 HAD- 87.7 1.5 3.2E-05 39.9 6.3 94 142-248 8-105 (242)
93 PTZ00445 p36-lilke protein; Pr 87.2 0.9 1.9E-05 42.0 4.5 114 139-252 40-192 (219)
94 COG2179 Predicted hydrolase of 86.1 0.84 1.8E-05 40.8 3.5 117 134-265 20-141 (175)
95 TIGR01490 HAD-SF-IB-hyp1 HAD-s 85.7 1.9 4.2E-05 37.4 5.7 83 168-251 87-184 (202)
96 TIGR02137 HSK-PSP phosphoserin 85.4 1.4 3E-05 39.7 4.7 47 168-215 68-114 (203)
97 COG0546 Gph Predicted phosphat 84.3 2.6 5.7E-05 37.8 6.0 92 167-259 88-183 (220)
98 PF06941 NT5C: 5' nucleotidase 82.9 1.2 2.7E-05 39.1 3.2 78 168-260 73-157 (191)
99 PF13344 Hydrolase_6: Haloacid 82.8 4 8.7E-05 32.6 5.9 54 145-208 1-55 (101)
100 COG4359 Uncharacterized conser 82.4 3.8 8.3E-05 37.5 6.2 41 167-207 72-113 (220)
101 PF08645 PNK3P: Polynucleotide 81.8 1.7 3.6E-05 37.7 3.6 104 143-250 1-130 (159)
102 PRK10748 flavin mononucleotide 81.7 1.7 3.6E-05 39.5 3.7 76 167-248 112-190 (238)
103 COG0561 Cof Predicted hydrolas 81.0 5.9 0.00013 36.1 7.1 59 141-208 2-61 (264)
104 PRK00192 mannosyl-3-phosphogly 78.9 7.3 0.00016 36.0 7.1 57 142-207 4-61 (273)
105 COG2503 Predicted secreted aci 77.5 1.3 2.7E-05 42.0 1.6 66 139-204 76-160 (274)
106 TIGR02726 phenyl_P_delta pheny 76.8 9.4 0.0002 33.5 6.8 113 141-262 6-122 (169)
107 TIGR01487 SPP-like sucrose-pho 76.6 9.1 0.0002 33.8 6.8 57 143-208 2-59 (215)
108 PLN02954 phosphoserine phospha 76.1 8.1 0.00017 34.1 6.3 84 168-253 84-184 (224)
109 COG0560 SerB Phosphoserine pho 74.2 10 0.00022 34.4 6.5 95 167-262 76-186 (212)
110 smart00775 LNS2 LNS2 domain. T 74.2 11 0.00023 32.6 6.4 60 145-204 2-67 (157)
111 PRK10187 trehalose-6-phosphate 70.1 8.5 0.00018 35.9 5.2 61 140-204 12-74 (266)
112 PF08282 Hydrolase_3: haloacid 69.6 9.5 0.0002 33.2 5.1 53 145-206 1-54 (254)
113 TIGR01675 plant-AP plant acid 69.4 12 0.00025 34.9 5.8 79 140-218 75-172 (229)
114 COG4502 5'(3')-deoxyribonucleo 69.4 4.4 9.6E-05 35.6 2.8 30 167-196 67-96 (180)
115 PF00702 Hydrolase: haloacid d 68.7 8.3 0.00018 33.1 4.5 80 166-249 125-206 (215)
116 TIGR01484 HAD-SF-IIB HAD-super 65.9 13 0.00029 32.3 5.3 54 144-205 1-55 (204)
117 PRK03669 mannosyl-3-phosphogly 65.6 23 0.0005 32.6 7.1 59 140-207 5-64 (271)
118 PRK11590 hypothetical protein; 64.5 10 0.00022 33.8 4.3 39 167-205 94-134 (211)
119 PRK01158 phosphoglycolate phos 64.0 27 0.00059 30.8 7.0 58 142-208 3-61 (230)
120 TIGR02461 osmo_MPG_phos mannos 63.1 22 0.00049 32.2 6.4 52 145-206 2-54 (225)
121 PLN02151 trehalose-phosphatase 62.5 12 0.00027 37.0 4.8 59 140-202 96-154 (354)
122 COG3882 FkbH Predicted enzyme 61.9 9.3 0.0002 39.6 3.9 122 139-267 219-357 (574)
123 TIGR01511 ATPase-IB1_Cu copper 61.8 26 0.00056 36.4 7.3 105 140-261 383-491 (562)
124 TIGR02244 HAD-IG-Ncltidse HAD 61.6 12 0.00026 36.8 4.6 42 164-205 180-223 (343)
125 PRK10530 pyridoxal phosphate ( 61.4 34 0.00074 30.9 7.3 57 142-207 3-60 (272)
126 KOG2914 Predicted haloacid-hal 60.5 9.3 0.0002 35.3 3.4 98 166-263 90-197 (222)
127 TIGR02463 MPGP_rel mannosyl-3- 59.9 24 0.00051 31.2 5.8 53 145-206 2-55 (221)
128 PRK10513 sugar phosphate phosp 59.7 27 0.00058 31.8 6.3 57 142-207 3-60 (270)
129 PLN02645 phosphoglycolate phos 59.3 18 0.00038 34.5 5.2 55 141-205 27-82 (311)
130 PRK10444 UMP phosphatase; Prov 57.9 24 0.00053 32.6 5.7 54 143-206 2-56 (248)
131 TIGR00099 Cof-subfamily Cof su 57.7 32 0.00069 31.1 6.4 54 145-207 2-56 (256)
132 PLN03017 trehalose-phosphatase 55.7 18 0.00039 36.0 4.7 60 140-203 109-168 (366)
133 TIGR01545 YfhB_g-proteo haloac 55.5 18 0.00039 32.5 4.3 37 168-204 94-132 (210)
134 PRK15126 thiamin pyrimidine py 55.4 38 0.00083 31.0 6.6 57 143-208 3-60 (272)
135 PLN02580 trehalose-phosphatase 55.2 22 0.00047 35.6 5.2 61 139-203 116-176 (384)
136 PF11019 DUF2608: Protein of u 54.7 23 0.00051 33.0 5.1 86 166-251 79-191 (252)
137 PF12710 HAD: haloacid dehalog 54.1 15 0.00033 31.1 3.4 79 171-249 92-186 (192)
138 TIGR01486 HAD-SF-IIB-MPGP mann 52.7 39 0.00084 30.7 6.1 53 145-206 2-55 (256)
139 TIGR00685 T6PP trehalose-phosp 51.9 12 0.00026 34.1 2.6 48 141-192 2-51 (244)
140 TIGR01456 CECR5 HAD-superfamil 51.7 25 0.00055 33.6 4.9 52 143-204 1-61 (321)
141 PF06888 Put_Phosphatase: Puta 49.6 36 0.00078 31.7 5.4 41 167-207 70-113 (234)
142 TIGR01458 HAD-SF-IIA-hyp3 HAD- 49.4 38 0.00082 31.3 5.6 56 143-204 2-58 (257)
143 TIGR01452 PGP_euk phosphoglyco 48.4 41 0.00089 31.2 5.7 41 143-193 3-44 (279)
144 PRK14502 bifunctional mannosyl 48.3 84 0.0018 34.0 8.4 60 139-207 413-473 (694)
145 PF08484 Methyltransf_14: C-me 45.0 50 0.0011 28.8 5.3 65 170-265 54-120 (160)
146 PRK10976 putative hydrolase; P 44.7 68 0.0015 29.1 6.4 56 143-207 3-59 (266)
147 TIGR01482 SPP-subfamily Sucros 43.9 69 0.0015 28.0 6.2 53 145-206 1-54 (225)
148 COG1877 OtsB Trehalose-6-phosp 42.5 44 0.00094 31.8 4.9 60 139-202 15-76 (266)
149 COG0647 NagD Predicted sugar p 39.9 65 0.0014 30.7 5.6 54 141-204 7-61 (269)
150 TIGR01485 SPP_plant-cyano sucr 39.4 59 0.0013 29.4 5.1 58 142-205 1-59 (249)
151 PLN02423 phosphomannomutase 38.6 85 0.0019 28.8 6.1 55 140-206 5-59 (245)
152 PF05822 UMPH-1: Pyrimidine 5' 37.9 40 0.00087 31.8 3.8 100 166-265 88-211 (246)
153 PRK12702 mannosyl-3-phosphogly 37.6 86 0.0019 30.5 6.1 56 143-207 2-58 (302)
154 TIGR01525 ATPase-IB_hvy heavy 37.4 1.1E+02 0.0024 31.6 7.3 75 167-251 383-460 (556)
155 TIGR01512 ATPase-IB2_Cd heavy 37.1 35 0.00076 35.1 3.6 77 166-251 360-438 (536)
156 TIGR01457 HAD-SF-IIA-hyp2 HAD- 34.8 92 0.002 28.5 5.7 39 143-191 2-41 (249)
157 TIGR01460 HAD-SF-IIA Haloacid 31.3 77 0.0017 28.8 4.5 50 145-204 1-55 (236)
158 cd02514 GT13_GLCNAC-TI GT13_GL 30.7 78 0.0017 31.1 4.7 40 165-204 6-52 (334)
159 TIGR01680 Veg_Stor_Prot vegeta 30.5 63 0.0014 31.0 3.9 79 141-219 100-198 (275)
160 PRK14501 putative bifunctional 28.7 85 0.0018 33.6 4.9 62 139-204 489-552 (726)
161 PTZ00174 phosphomannomutase; P 27.2 1.5E+02 0.0033 26.9 5.7 48 141-197 4-52 (247)
162 PF05116 S6PP: Sucrose-6F-phos 27.1 70 0.0015 29.4 3.5 55 141-204 1-56 (247)
163 KOG3120 Predicted haloacid deh 25.8 51 0.0011 31.1 2.3 39 167-205 83-123 (256)
164 PHA03050 glutaredoxin; Provisi 25.6 90 0.002 25.3 3.5 35 174-208 3-37 (108)
165 COG3769 Predicted hydrolase (H 21.5 2.5E+02 0.0054 26.7 5.9 59 142-209 7-65 (274)
166 TIGR02826 RNR_activ_nrdG3 anae 21.4 2.1E+02 0.0045 24.5 5.1 71 156-246 65-137 (147)
167 cd02037 MRP-like MRP (Multiple 20.9 95 0.0021 26.2 2.9 50 140-195 27-79 (169)
168 PLN02887 hydrolase family prot 20.7 2.3E+02 0.0051 29.9 6.2 58 140-206 306-364 (580)
169 PF14796 AP3B1_C: Clathrin-ada 20.5 54 0.0012 28.5 1.3 79 141-225 3-85 (145)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=1.6e-47 Score=355.57 Aligned_cols=171 Identities=47% Similarity=0.828 Sum_probs=159.5
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCceeeee----------------ecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCC
Q 022210 129 WPRTPLREPIAGLPITLVLDLDDFSFPIH----------------SKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAG 192 (301)
Q Consensus 129 ~~~llP~~~~~~~K~tLVLDLDd~l~~v~----------------~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas 192 (301)
...++|......+|+|||||||+|+++-. +++..+.+||.+|||+++||++++++||+++|||+
T Consensus 76 ~~~~~~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs 155 (262)
T KOG1605|consen 76 LSPVLPLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTAS 155 (262)
T ss_pred ccccCCcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhh
Confidence 34455666668999999999998766533 45677899999999999999999999999999999
Q ss_pred chHHHHHHHHHHCCCCceeeeEEecCccceeCCcccccccccCCCCCcEEEEECCchhcccCCCceeeccCccCCCCCHH
Q 022210 193 QSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSA 272 (301)
Q Consensus 193 ~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~~f~gd~~D~e 272 (301)
.+.||++|++.||+.+++|++|+||++|+..+|.|+|||+.+|+|+++||||||+|.+|.+||+|||||++|++|+.|+|
T Consensus 156 ~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~e 235 (262)
T KOG1605|consen 156 LEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTE 235 (262)
T ss_pred hHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHH
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCChHHHHHhhhcC
Q 022210 273 LLSLLMFLETLVGADDVRPIIKQKYGS 299 (301)
Q Consensus 273 Ll~L~~~L~~L~~~~DVR~~l~~~f~~ 299 (301)
|++|+|||++|+.++|||++++++|+.
T Consensus 236 LL~LlpfLe~L~~~~Dvr~~l~~~~~~ 262 (262)
T KOG1605|consen 236 LLKLLPFLEALAFVDDVRPILARRFGN 262 (262)
T ss_pred HHHHHHHHHHhcccccHHHHHHHhhcC
Confidence 999999999999999999999999874
No 2
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=3e-39 Score=275.72 Aligned_cols=148 Identities=49% Similarity=0.827 Sum_probs=125.6
Q ss_pred cEEEEecCCceeeeeecC----------eeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceee
Q 022210 143 ITLVLDLDDFSFPIHSKM----------EVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG 212 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~----------~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~ 212 (301)
+|||||||+|+++..... ....++|++|||+++||++|+++|||+|||++++.||++|++.|||++.+|.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~ 80 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFS 80 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEE
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhccccc
Confidence 699999999999876542 3457899999999999999999999999999999999999999999888999
Q ss_pred eEEecCccceeCCcccccccccCCCCCcEEEEECCchhcccCCCceeeccCccCC-CCCHHHHHHHHHHhhccCCCChH
Q 022210 213 QRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGD-PSDSALLSLLMFLETLVGADDVR 290 (301)
Q Consensus 213 ~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~~f~gd-~~D~eLl~L~~~L~~L~~~~DVR 290 (301)
+++||++|....|.++|||+++|+++++||||||+|.+|..|++|+|+|++|.++ +.|++|.+|++||++|+..+|||
T Consensus 81 ~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~Dvr 159 (159)
T PF03031_consen 81 RRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKEDDVR 159 (159)
T ss_dssp EEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS-CH
T ss_pred cccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCcccCCC
Confidence 9999999999999889999999999999999999999999999999999999999 99999999999999999999998
No 3
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=5.4e-39 Score=278.64 Aligned_cols=147 Identities=48% Similarity=0.840 Sum_probs=138.5
Q ss_pred CcEEEEecCCceeeeeec---------------CeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCC
Q 022210 142 PITLVLDLDDFSFPIHSK---------------MEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~---------------~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp 206 (301)
|+|||||||+|+++.... +...++||++|||+.+||++|+++|||+||||+.+.||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 689999999999875432 22558999999999999999999999999999999999999999999
Q ss_pred CCceeeeEEecCccceeCCcccccccccCCCCCcEEEEECCchhcccCCCceeeccCccCCCCCHHHHHHHHHHhhccCC
Q 022210 207 NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGA 286 (301)
Q Consensus 207 ~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~~f~gd~~D~eLl~L~~~L~~L~~~ 286 (301)
.+.+|.+++||++|....|.++|||+.+||++++||||||+|..|..||+|||+|.+|.|+.+|++|.+|++||+.|+..
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 022210 287 DD 288 (301)
Q Consensus 287 ~D 288 (301)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=2.1e-38 Score=284.01 Aligned_cols=158 Identities=23% Similarity=0.306 Sum_probs=136.9
Q ss_pred CCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCC-ceeeeEEec
Q 022210 139 AGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVYR 217 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~-~~f~~rlyR 217 (301)
..+|+|||||||+|+++..... .++++.+||||++||++|+++|||+||||+++.||+.+++.|++.+ ..+..++++
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~--~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~l 95 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPA--ETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLL 95 (195)
T ss_pred CCCCcEEEEeCCCceEcccccC--CCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEe
Confidence 4678999999999999754332 3568899999999999999999999999999999999999997643 235567777
Q ss_pred Cccce------eCCc-cccccccc------CCCCCcEEEEECCchhcccCCCceeeccCccC----CCCCHHHHHHHHHH
Q 022210 218 DSCVF------ADGE-YLKDLTIL------GRDLARIAIVDNTPQVFQLQVDNGIPIESWFG----DPSDSALLSLLMFL 280 (301)
Q Consensus 218 e~C~~------~~g~-~iKDLs~L------grdls~vIIVDdsp~~~~~qp~N~I~I~~f~g----d~~D~eLl~L~~~L 280 (301)
++|.. ..|. ++|||+.+ ++++++||||||+|.++.+||+|||+|++|++ +..|++|++|+|||
T Consensus 96 d~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~~~~D~eL~~L~~yL 175 (195)
T TIGR02245 96 DSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHANRGTDQELLKLTQYL 175 (195)
T ss_pred ccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCCCcccHHHHHHHHHH
Confidence 88842 3455 59999988 34889999999999999999999999999995 57899999999999
Q ss_pred hhccCCCChHHHHHhhhc
Q 022210 281 ETLVGADDVRPIIKQKYG 298 (301)
Q Consensus 281 ~~L~~~~DVR~~l~~~f~ 298 (301)
+.|+.++|||++++++|.
T Consensus 176 ~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 176 KTIAELEDFSSLDHKEWE 193 (195)
T ss_pred HHHhcCcccchhhhcccc
Confidence 999999999999999875
No 5
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=9.9e-36 Score=284.22 Aligned_cols=170 Identities=30% Similarity=0.555 Sum_probs=157.9
Q ss_pred CCCCCCCCCCCC--C-CCCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHH
Q 022210 125 APSYWPRTPLRE--P-IAGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLL 201 (301)
Q Consensus 125 ~~~~~~~llP~~--~-~~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vl 201 (301)
..+.++.|+|.+ + ..++++||||||.+++|+-.|.-. .++.+++|||++.||.+++++|||||||+.+..||.+|+
T Consensus 169 ~EP~~~~LLPdpl~pPy~Qp~yTLVleledvLVhpdws~~-tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~ 247 (393)
T KOG2832|consen 169 KEPDRAKLLPDPLPPPYEQPPYTLVLELEDVLVHPDWSYK-TGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLL 247 (393)
T ss_pred cCCchhhhCCCCCCCcccCCCceEEEEeeeeEeccchhhh-cCceeccCchHHHHHHhhcccceEEEEecCCccchhhhH
Confidence 455677777663 3 349999999999999999988765 689999999999999999999999999999999999999
Q ss_pred HHHCCCCceeeeEEecCccceeCCcccccccccCCCCCcEEEEECCchhcccCCCceeeccCccCCCCCHHHHHHHHHHh
Q 022210 202 DILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLE 281 (301)
Q Consensus 202 d~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~~f~gd~~D~eLl~L~~~L~ 281 (301)
+.|||+| +++++|||++|.+.+|.++|||+.|+||+++||+||-.+.++.+||+|+|++++|.|+.+|+.|.+|++||+
T Consensus 248 d~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~ 326 (393)
T KOG2832|consen 248 DALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLE 326 (393)
T ss_pred hhcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHH
Confidence 9999997 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC--CCChHHHHHhh
Q 022210 282 TLVG--ADDVRPIIKQK 296 (301)
Q Consensus 282 ~L~~--~~DVR~~l~~~ 296 (301)
.|+. ++|||++|+.+
T Consensus 327 ~ia~~~~eDvR~vL~~y 343 (393)
T KOG2832|consen 327 YIAQQQVEDVRPVLQSY 343 (393)
T ss_pred HHHHccHHHHHHHHHHh
Confidence 9986 57999999863
No 6
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=5.6e-30 Score=221.76 Aligned_cols=124 Identities=26% Similarity=0.461 Sum_probs=110.5
Q ss_pred CCCCcEEEEecCCceeeeeecC--------------------------eeeeEEEEeCchHHHHHHHHHhCceEEEEcCC
Q 022210 139 AGLPITLVLDLDDFSFPIHSKM--------------------------EVQTVFVRQRPYLHMFLEAVASMFDVVIFTAG 192 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~--------------------------~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas 192 (301)
..+|++||||||+|+++..... ....+++++|||+.+||++|++.||++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 4689999999999998754321 12457899999999999999999999999999
Q ss_pred chHHHHHHHHHHCCCCceeeeE-EecCccceeCCccccccc-ccCCCCCcEEEEECCchhcccCCCceeeccCcc
Q 022210 193 QSIYAGQLLDILDPNQTLIGQR-VYRDSCVFADGEYLKDLT-ILGRDLARIAIVDNTPQVFQLQVDNGIPIESWF 265 (301)
Q Consensus 193 ~~~YA~~vld~LDp~~~~f~~r-lyRe~C~~~~g~~iKDLs-~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~~f~ 265 (301)
.+.||++|++.|||.+.+|++| ++|++|. |.++|||+ .+|+|+++||||||+|.+|..||+|+|+|++|.
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 9999999999999998899776 5699996 78999995 569999999999999999999999999999995
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.95 E-value=1.8e-28 Score=238.62 Aligned_cols=165 Identities=36% Similarity=0.647 Sum_probs=150.1
Q ss_pred CCCCCC-CCCCCCcEEEEecCCceee--------------eeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchH
Q 022210 131 RTPLRE-PIAGLPITLVLDLDDFSFP--------------IHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSI 195 (301)
Q Consensus 131 ~llP~~-~~~~~K~tLVLDLDd~l~~--------------v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~ 195 (301)
.++|+. ....+++||++|||+++++ +...+..+.+||.+||||++||..++++|++++||++.+.
T Consensus 200 ~l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~ 279 (390)
T COG5190 200 TLEPPVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKR 279 (390)
T ss_pred cccchhhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhh
Confidence 344433 3458899999999966543 3345567899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCceeeeEEecCccceeCCcccccccccCCCCCcEEEEECCchhcccCCCceeeccCccCCCCCHHHHH
Q 022210 196 YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLS 275 (301)
Q Consensus 196 YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~~f~gd~~D~eLl~ 275 (301)
||++|++.|++.+ .|++++||++|....|.|+|||+++||++.+|||||++|.+|.+||+|+|+|++|.+++.|++|+.
T Consensus 280 y~~~v~d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ 358 (390)
T COG5190 280 YADPVLDILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLN 358 (390)
T ss_pred hcchHHHhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhh
Confidence 9999999999997 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccC--CCChHHHHHhh
Q 022210 276 LLMFLETLVG--ADDVRPIIKQK 296 (301)
Q Consensus 276 L~~~L~~L~~--~~DVR~~l~~~ 296 (301)
|+++|+.|.. ..||+.++..+
T Consensus 359 ll~~le~L~~~~~~d~~~~l~~~ 381 (390)
T COG5190 359 LLPFLEDLPDRDLKDVSSILQSR 381 (390)
T ss_pred hcccccccccccchhhhhhhhhh
Confidence 9999999998 77999998764
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.91 E-value=4e-24 Score=182.17 Aligned_cols=131 Identities=42% Similarity=0.822 Sum_probs=119.4
Q ss_pred CCcEEEEecCCceeeee-----------------ecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHH
Q 022210 141 LPITLVLDLDDFSFPIH-----------------SKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI 203 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~-----------------~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~ 203 (301)
+|++||||||+|+++.. +.+....++++.|||+.+||++|.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 58999999999998752 1234457889999999999999999999999999999999999999
Q ss_pred HCCCCceeeeEEecCccceeCCcccccccccCCCCCcEEEEECCchhcccCCCceeeccCccCCCCCH
Q 022210 204 LDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDS 271 (301)
Q Consensus 204 LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~~f~gd~~D~ 271 (301)
+++.+.+|...+++++|....+.|.|+|+++|++++++|+|||++..|..++.|||+|++|.++.+|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976667899999999988778999999999999999999999999999999999999999998874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.69 E-value=8.4e-17 Score=164.86 Aligned_cols=99 Identities=26% Similarity=0.482 Sum_probs=88.1
Q ss_pred eeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEe-cCccceeCCccccccccc-CCCCCc
Q 022210 163 QTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTIL-GRDLAR 240 (301)
Q Consensus 163 ~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rly-Re~C~~~~g~~iKDLs~L-grdls~ 240 (301)
..+||++||++++||++++++||+.|||.|.+.||..|+..|||.|++|++|++ |+. ....-.+||..+ -++.++
T Consensus 196 ~~~~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~sm 272 (635)
T KOG0323|consen 196 TEYLVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSM 272 (635)
T ss_pred ceEEEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCcc
Confidence 358999999999999999999999999999999999999999999999999865 666 223345677766 578889
Q ss_pred EEEEECCchhcccCCCceeeccCc
Q 022210 241 IAIVDNTPQVFQLQVDNGIPIESW 264 (301)
Q Consensus 241 vIIVDdsp~~~~~qp~N~I~I~~f 264 (301)
||||||+..+|..++.|.|.|.+|
T Consensus 273 vvIIDDr~dVW~~~~~nLI~i~~y 296 (635)
T KOG0323|consen 273 VVIIDDRSDVWPDHKRNLIQIAPY 296 (635)
T ss_pred EEEEeCccccccCCCcceEEeeee
Confidence 999999999999999999999998
No 10
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.09 E-value=2.1e-06 Score=84.65 Aligned_cols=100 Identities=24% Similarity=0.445 Sum_probs=82.4
Q ss_pred eeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCCccccccccc-CCCCCc
Q 022210 162 VQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTIL-GRDLAR 240 (301)
Q Consensus 162 ~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~L-grdls~ 240 (301)
...++++.||++..|+...++.||+.+||.|...||+.+..++||.|+.|..+..-.+- ..+.-.|-++++ ..+.+.
T Consensus 70 ~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~~~~~~~~~i~d~~g~~~~d~~~~~~~--~~~~~~~s~~~l~p~~~n~ 147 (390)
T COG5190 70 KCAYYVKARPKLFPFLTKISPLYELHIYTMGTRAYAERIAKIIDPTGKLFNDRILSRDE--SGSLSQKSLSRLFPKDQNM 147 (390)
T ss_pred cccceeeecccccchhhhhchhcceeeEeeccccchhhhhhcccccccccccccccccc--cccchhhhhhhcCcccccc
Confidence 45689999999999999999999999999999999999999999999988777653322 233457778877 789999
Q ss_pred EEEEECCchhcccC--CCceeeccC
Q 022210 241 IAIVDNTPQVFQLQ--VDNGIPIES 263 (301)
Q Consensus 241 vIIVDdsp~~~~~q--p~N~I~I~~ 263 (301)
++++||.+..|.-+ -.|.++..+
T Consensus 148 ~vi~~d~~~~~~~~d~~~~~v~~~~ 172 (390)
T COG5190 148 VVIIDDRGDVWGVGDMNSNFVAKSP 172 (390)
T ss_pred ccccccccccCCccchhhhhhcccc
Confidence 99999999999332 346677766
No 11
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.85 E-value=2.4e-05 Score=61.77 Aligned_cols=106 Identities=14% Similarity=0.191 Sum_probs=70.9
Q ss_pred EEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccce
Q 022210 144 TLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF 222 (301)
Q Consensus 144 tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~ 222 (301)
++|+|+|+|++....... ....+..+|++.++|+++.+. +.++|.|++...++..+++.+.-.. .+...+..+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~ 78 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA-EIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD-YFDPVITSNGAAI 78 (139)
T ss_pred CeEEccCCceEccCcccc-ccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch-hhhheeccchhhh
Confidence 479999999875432111 112356899999999999986 9999999999999999999875432 3344443332221
Q ss_pred e----------------CC---cccccccccCCCCCcEEEEECCchhc
Q 022210 223 A----------------DG---EYLKDLTILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 223 ~----------------~g---~~iKDLs~Lgrdls~vIIVDdsp~~~ 251 (301)
. .+ .+.+-+..++.+.+.+++|+|++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~ 126 (139)
T cd01427 79 YYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDI 126 (139)
T ss_pred hcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHH
Confidence 1 11 12222334466789999999998543
No 12
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.61 E-value=3.8e-05 Score=64.02 Aligned_cols=106 Identities=15% Similarity=0.070 Sum_probs=70.1
Q ss_pred cEEEEecCCceeeeeecCeeeeEEE----EeCchHHHHHHHHHh-CceEEEEcCC-chHHHHHHHHHHCCC------Cce
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFV----RQRPYLHMFLEAVAS-MFDVVIFTAG-QSIYAGQLLDILDPN------QTL 210 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V----~~RP~l~eFL~~ls~-~fEIvIfTas-~~~YA~~vld~LDp~------~~~ 210 (301)
+.+|+|||+|+..-... .....-+ ...||+.++|+.+.+ .+.++|.|++ .+.++..+++...+. .++
T Consensus 1 kli~~DlD~Tl~~~~~~-~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~ 79 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENI-VVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEY 79 (128)
T ss_pred CEEEEeCCCCCCCCCcc-cccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhh
Confidence 46899999998743110 0000000 357999999999975 6999999999 899999999987521 123
Q ss_pred eeeEEecCccceeCCcccccccccC--CCCCcEEEEECCchh
Q 022210 211 IGQRVYRDSCVFADGEYLKDLTILG--RDLARIAIVDNTPQV 250 (301)
Q Consensus 211 f~~rlyRe~C~~~~g~~iKDLs~Lg--rdls~vIIVDdsp~~ 250 (301)
|......+.- ...-.+.+=+..+| ...+++++|||++..
T Consensus 80 f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n 120 (128)
T TIGR01681 80 FDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDN 120 (128)
T ss_pred hhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhH
Confidence 3333322211 11113455566678 899999999999865
No 13
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.48 E-value=0.00084 Score=64.46 Aligned_cols=122 Identities=18% Similarity=0.182 Sum_probs=86.2
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeC-chHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEec
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQR-PYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR 217 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~R-P~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyR 217 (301)
..++.+|+|||+|++.-+ . -|..| |++.+.|+++.+ .+-++|+|++.+.++..+++.+.-.+ +|...+..
T Consensus 126 ~~~~~i~~D~D~TL~~~~-----~--~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~-yFDvII~~ 197 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDE-----E--PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG-YFDIIICG 197 (303)
T ss_pred eeccEEEEecCCCccCCC-----C--ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc-cccEEEEC
Confidence 677899999999997432 1 35579 999999999997 59999999999999999999998764 56655554
Q ss_pred CccceeC----------------Cccccccc---cc--------------CCC-CCcEEEEECCchhcccCCCceeeccC
Q 022210 218 DSCVFAD----------------GEYLKDLT---IL--------------GRD-LARIAIVDNTPQVFQLQVDNGIPIES 263 (301)
Q Consensus 218 e~C~~~~----------------g~~iKDLs---~L--------------grd-ls~vIIVDdsp~~~~~qp~N~I~I~~ 263 (301)
++..... ..+..|.. .| |-. .+.+-+|||-+..= +.-||-|.++.
T Consensus 198 g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn-~~YD~fv~v~r 276 (303)
T PHA03398 198 GRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNN-YSYDYFVNVKR 276 (303)
T ss_pred CCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCcccC-ccceeEEEeee
Confidence 4433322 23334444 22 222 24466999987543 56788888887
Q ss_pred ccCCCCC
Q 022210 264 WFGDPSD 270 (301)
Q Consensus 264 f~gd~~D 270 (301)
.-.-.+|
T Consensus 277 cp~P~~D 283 (303)
T PHA03398 277 CPEPVND 283 (303)
T ss_pred CCCCcHH
Confidence 6554444
No 14
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.33 E-value=0.00033 Score=57.55 Aligned_cols=104 Identities=20% Similarity=0.083 Sum_probs=69.4
Q ss_pred cEEEEecCCceeee-eecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCc--------hHHHHHHHHHHCCCCceee
Q 022210 143 ITLVLDLDDFSFPI-HSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ--------SIYAGQLLDILDPNQTLIG 212 (301)
Q Consensus 143 ~tLVLDLDd~l~~v-~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~--------~~YA~~vld~LDp~~~~f~ 212 (301)
+.+++|+|+|+..- .+.... -.....|++.++|++|.+ -+.++|-|.+. ..++..+++.+.-. +.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~--~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~---~~ 75 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDE--DERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP---ID 75 (132)
T ss_pred CEEEEeCCCceecCCCCCCCH--HHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC---EE
Confidence 46899999999731 000011 124578999999999975 59999999999 88888899888653 22
Q ss_pred eEEecCccc-eeCCccccccccc-CCCCCcEEEEEC-Cchhc
Q 022210 213 QRVYRDSCV-FADGEYLKDLTIL-GRDLARIAIVDN-TPQVF 251 (301)
Q Consensus 213 ~rlyRe~C~-~~~g~~iKDLs~L-grdls~vIIVDd-sp~~~ 251 (301)
..++...+. .....+.+=++.+ +-+.+++++|+| +....
T Consensus 76 ~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di 117 (132)
T TIGR01662 76 VLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDL 117 (132)
T ss_pred EEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccH
Confidence 222222111 1122445566677 589999999999 45443
No 15
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.23 E-value=0.001 Score=59.03 Aligned_cols=98 Identities=11% Similarity=0.041 Sum_probs=70.0
Q ss_pred EEEEeCchHHHHHHHHH-hCceEEEEcCC-chHHHHHHHHHHCCC--C------ceeeeEEecCccceeCCcc----ccc
Q 022210 165 VFVRQRPYLHMFLEAVA-SMFDVVIFTAG-QSIYAGQLLDILDPN--Q------TLIGQRVYRDSCVFADGEY----LKD 230 (301)
Q Consensus 165 ~~V~~RP~l~eFL~~ls-~~fEIvIfTas-~~~YA~~vld~LDp~--~------~~f~~rlyRe~C~~~~g~~----iKD 230 (301)
.-+..+||+.++|+.|. +.+.+.|-|++ ...++..+++.++-. | .+|...+.-+.. ..... ++.
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~--~~~kp~~~i~~~ 119 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKP--NKAKQLEMILQK 119 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCC--chHHHHHHHHHH
Confidence 35778999999999998 56999999988 999999999999753 2 466666664431 11111 222
Q ss_pred cccc---CCCCCcEEEEECCchhcccCCCceeeccCc
Q 022210 231 LTIL---GRDLARIAIVDNTPQVFQLQVDNGIPIESW 264 (301)
Q Consensus 231 Ls~L---grdls~vIIVDdsp~~~~~qp~N~I~I~~f 264 (301)
+... |-+.+++++|||++.....-..+|+.+--.
T Consensus 120 ~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 120 VNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred hhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 2222 478899999999999876656666665444
No 16
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.19 E-value=0.001 Score=63.78 Aligned_cols=122 Identities=16% Similarity=0.149 Sum_probs=84.4
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeC-chHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEec
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQR-PYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR 217 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~R-P~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyR 217 (301)
..+..+|+|||+|++.-. . -|..| ||+.++|++|.+. +-++|||++.+.+|..+++.++-.+ +|...+..
T Consensus 124 ~~~kvIvFDLDgTLi~~~-----~--~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~-YFdvIIs~ 195 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDE-----E--PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR-YFDIIISG 195 (301)
T ss_pred ccceEEEEecCCCCcCCC-----C--ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc-ccCEEEEC
Confidence 567899999999998432 1 35579 9999999999976 8999999999999999999998774 56555553
Q ss_pred Ccccee----------------CCccccccc---cc--------------CCCC-CcEEEEECCchhcccCCCceeeccC
Q 022210 218 DSCVFA----------------DGEYLKDLT---IL--------------GRDL-ARIAIVDNTPQVFQLQVDNGIPIES 263 (301)
Q Consensus 218 e~C~~~----------------~g~~iKDLs---~L--------------grdl-s~vIIVDdsp~~~~~qp~N~I~I~~ 263 (301)
++.... ...+..|.. .| |-.- +.+-+|||-+..= +.-||-|.++.
T Consensus 196 Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn-~~YD~fv~v~r 274 (301)
T TIGR01684 196 GHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNN-FNYDYFVNVSR 274 (301)
T ss_pred CccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCcccC-ccceeEEEeee
Confidence 333222 122333442 22 3222 3456899987543 46788888877
Q ss_pred ccCCCCC
Q 022210 264 WFGDPSD 270 (301)
Q Consensus 264 f~gd~~D 270 (301)
.---.+|
T Consensus 275 cp~P~~D 281 (301)
T TIGR01684 275 CPVPVND 281 (301)
T ss_pred CCCCchH
Confidence 6544444
No 17
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.09 E-value=0.00039 Score=64.88 Aligned_cols=122 Identities=11% Similarity=0.152 Sum_probs=84.9
Q ss_pred CCCcEEEEecCCceeeeeecCe---eeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEE
Q 022210 140 GLPITLVLDLDDFSFPIHSKME---VQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 215 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~---~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rl 215 (301)
.++..+++|+|+++........ ....-....|++.++|+.+.+. +.++|.|+.....++.+++.|...+.+|....
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~ 235 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLI 235 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhh
Confidence 3568899999998875421100 0001234689999999999865 99999999999999999999988875676665
Q ss_pred ecCccc-------eeCC---cccccccccCC-CCCcEEEEECCchhcccCCCceeec
Q 022210 216 YRDSCV-------FADG---EYLKDLTILGR-DLARIAIVDNTPQVFQLQVDNGIPI 261 (301)
Q Consensus 216 yRe~C~-------~~~g---~~iKDLs~Lgr-dls~vIIVDdsp~~~~~qp~N~I~I 261 (301)
..+.+. .... .+.+-|..++. +.+.+++|+|++.....-..+||+.
T Consensus 236 ~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 236 GRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 555211 1111 22344555677 6799999999998776555666654
No 18
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.99 E-value=0.0012 Score=63.03 Aligned_cols=107 Identities=13% Similarity=0.029 Sum_probs=71.5
Q ss_pred CCcEEEEecCCceeeeee--cCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHH----HCCCCceeee
Q 022210 141 LPITLVLDLDDFSFPIHS--KMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDI----LDPNQTLIGQ 213 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~--~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~----LDp~~~~f~~ 213 (301)
.++++|+|||+|+..-.. ++..+-......|++.++|+.+.+ -+-+.|-|......|..+++. +.... +|..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~-~f~~ 80 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAE-DFDA 80 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHH-HeeE
Confidence 478999999999864221 111111112246899999999985 589999999999999999987 54332 3433
Q ss_pred EEecCccceeCC-cccccccccCCCCCcEEEEECCchhc
Q 022210 214 RVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 214 rlyRe~C~~~~g-~~iKDLs~Lgrdls~vIIVDdsp~~~ 251 (301)
.... +.... ...+=+..+|-+++.+|+|||++...
T Consensus 81 ~~~~---~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 81 RSIN---WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred EEEe---cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 2111 11111 33344456788999999999998755
No 19
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.99 E-value=0.0026 Score=55.26 Aligned_cols=114 Identities=16% Similarity=0.065 Sum_probs=71.2
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCch---------------HHHHHHHHHHCC
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS---------------IYAGQLLDILDP 206 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~---------------~YA~~vld~LDp 206 (301)
+.|.||+|+|++. ..+.....--+..-||+.++|++|.+ -|.++|.|++.. .|...++..+..
T Consensus 2 ~~~~~D~Dgtl~~-~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (176)
T TIGR00213 2 KAIFLDRDGTINI-DHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDV 80 (176)
T ss_pred CEEEEeCCCCEeC-CCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 5789999999973 11111111234567999999999986 599999999885 233344443322
Q ss_pred CCceeeeEEecC-----------cccee---CCcccccccccCCCCCcEEEEECCchhcccCCCceee
Q 022210 207 NQTLIGQRVYRD-----------SCVFA---DGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 207 ~~~~f~~rlyRe-----------~C~~~---~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~ 260 (301)
.|...++.. .|... .+.|.+=++++|-+++++++|+|++.-...-..+|+.
T Consensus 81 ---~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~ 145 (176)
T TIGR00213 81 ---DLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVK 145 (176)
T ss_pred ---CccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCc
Confidence 133333321 22222 2245566777899999999999998765443444543
No 20
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.89 E-value=0.0029 Score=55.08 Aligned_cols=107 Identities=15% Similarity=-0.018 Sum_probs=68.8
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCch---------------HHHHHHHHHHC
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS---------------IYAGQLLDILD 205 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~---------------~YA~~vld~LD 205 (301)
.+.|++|+|+|++.-.-......-.+...||+.++|++|.+. |.++|-|++.. .+...+++.+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 81 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR- 81 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-
Confidence 478999999997432101111111255789999999999975 99999998863 2333344433
Q ss_pred CCCceeeeEEecCcc-----cee---CCcccccccccCCCCCcEEEEECCchhc
Q 022210 206 PNQTLIGQRVYRDSC-----VFA---DGEYLKDLTILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 206 p~~~~f~~rlyRe~C-----~~~---~g~~iKDLs~Lgrdls~vIIVDdsp~~~ 251 (301)
|..|...++...+ ... ...|.+-+..+|-+.+++++|+|++.-.
T Consensus 82 --g~~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di 133 (181)
T PRK08942 82 --GGRLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDL 133 (181)
T ss_pred --CCccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHH
Confidence 3235555554332 111 1245566777899999999999998755
No 21
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.83 E-value=0.0027 Score=52.60 Aligned_cols=85 Identities=19% Similarity=0.245 Sum_probs=69.4
Q ss_pred EEEeCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcE
Q 022210 166 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI 241 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~v 241 (301)
.....|++.++|+.+. +.+.++|.|.+...++..+++.+... .+|...++.++...... .|.+=+..+|-+.+++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 5678999999999999 78999999999999999999999665 47888887765544322 4555666778899999
Q ss_pred EEEECCchhc
Q 022210 242 AIVDNTPQVF 251 (301)
Q Consensus 242 IIVDdsp~~~ 251 (301)
++|||++...
T Consensus 154 ~~vgD~~~d~ 163 (176)
T PF13419_consen 154 LFVGDSPSDV 163 (176)
T ss_dssp EEEESSHHHH
T ss_pred EEEeCCHHHH
Confidence 9999998654
No 22
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.56 E-value=0.0033 Score=55.53 Aligned_cols=82 Identities=15% Similarity=0.184 Sum_probs=67.0
Q ss_pred EEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcE
Q 022210 166 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 241 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~v 241 (301)
++...||+.+||+++.+. +-+.|.|++...++...++.++-.. +|...+..+...... ..|.+=+..+|-+.+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 456899999999999875 9999999999999999999987654 687777766544322 24666778889999999
Q ss_pred EEEECCc
Q 022210 242 AIVDNTP 248 (301)
Q Consensus 242 IIVDdsp 248 (301)
|+|.|++
T Consensus 171 ~~igDs~ 177 (221)
T TIGR02253 171 VMVGDRL 177 (221)
T ss_pred EEECCCh
Confidence 9999998
No 23
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.56 E-value=0.0042 Score=52.49 Aligned_cols=106 Identities=21% Similarity=0.143 Sum_probs=66.6
Q ss_pred cEEEEecCCceeeeeecC-eeeeEEEEeCchHHHHHHHHH-hCceEEEEcCCch---------------HHHHHHHHHHC
Q 022210 143 ITLVLDLDDFSFPIHSKM-EVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS---------------IYAGQLLDILD 205 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~-~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~---------------~YA~~vld~LD 205 (301)
++|++|+|+|+....... ....--+...||+.++|+.|. +.|.++|-|++.+ .++..+++.++
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 80 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLG 80 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCC
Confidence 478999999987543211 000011457899999999997 5699999999873 56666676664
Q ss_pred CCCceeeeEEecC-----c--cce-eCCcccccccccCCCCCcEEEEECCchhc
Q 022210 206 PNQTLIGQRVYRD-----S--CVF-ADGEYLKDLTILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 206 p~~~~f~~rlyRe-----~--C~~-~~g~~iKDLs~Lgrdls~vIIVDdsp~~~ 251 (301)
-. +...++.. . +.. ....+.+=+..+|-+++++++|.|++.-.
T Consensus 81 l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di 131 (147)
T TIGR01656 81 VA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDL 131 (147)
T ss_pred Cc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHH
Confidence 42 22222221 1 111 11133444556688999999999987644
No 24
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.33 E-value=0.007 Score=52.65 Aligned_cols=117 Identities=15% Similarity=0.004 Sum_probs=76.8
Q ss_pred cEEEEecCCceeeeeec--CeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCC---------------chHHHHHHHHHH
Q 022210 143 ITLVLDLDDFSFPIHSK--MEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG---------------QSIYAGQLLDIL 204 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~--~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas---------------~~~YA~~vld~L 204 (301)
+.+.||.|++++..... .....-.+..-||+.++|++|.+ .|.++|.|+. ...++..+++.+
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ 81 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC
Confidence 57899999998652110 00111146678999999999986 5999999996 356778888887
Q ss_pred CCCCceeeeEEec-----CccceeCC---cccccccccCCCCCcEEEEECCchhcccCCCceeecc
Q 022210 205 DPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE 262 (301)
Q Consensus 205 Dp~~~~f~~rlyR-----e~C~~~~g---~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~ 262 (301)
+-. |...++. +.+..... .+..-++.+|-+.+++++|.|+..-...-..+|+..-
T Consensus 82 gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 82 GII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred CCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 664 6555542 44433322 2333445568889999999999764443334555443
No 25
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.30 E-value=0.0076 Score=53.05 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=67.1
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---ccccccccc-CCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTIL-GRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~L-grdls~vI 242 (301)
+..+||+.++|+++.+.+.++|-|++...++..+++.+.-.+ +|.+.+..+.+..... .|.+=+..+ |-+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 467999999999999779999999999999999999986654 7888887666544322 456667888 99999999
Q ss_pred EEECCc
Q 022210 243 IVDNTP 248 (301)
Q Consensus 243 IVDdsp 248 (301)
+|+|++
T Consensus 175 ~igD~~ 180 (224)
T TIGR02254 175 MIGDSL 180 (224)
T ss_pred EECCCc
Confidence 999997
No 26
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.29 E-value=0.0067 Score=51.45 Aligned_cols=83 Identities=19% Similarity=0.237 Sum_probs=62.7
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vI 242 (301)
+...||+.+||+.+.+ .+.++|.|++...+ ..++..++-.+ +|...++.+...... ..|.+=+..+|.+.+++|
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 5679999999999986 59999999999998 66666565543 577777755543322 245555667788999999
Q ss_pred EEECCchhc
Q 022210 243 IVDNTPQVF 251 (301)
Q Consensus 243 IVDdsp~~~ 251 (301)
+|+|++...
T Consensus 162 ~vgD~~~di 170 (183)
T TIGR01509 162 FVDDSPAGI 170 (183)
T ss_pred EEcCCHHHH
Confidence 999998644
No 27
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.17 E-value=0.007 Score=53.61 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=74.0
Q ss_pred EEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcE
Q 022210 166 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 241 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~v 241 (301)
.+...||+.++|+.+.+ .+.++|.|++.+.++..+++.++-.. +|...+..+++.... ..+.+-+..+|-+.+++
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 158 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA 158 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence 35578999999999985 69999999999999999999997764 788888777654432 24556667778889999
Q ss_pred EEEECCchhcccCCCceee
Q 022210 242 AIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 242 IIVDdsp~~~~~qp~N~I~ 260 (301)
++|+|++.-...-...|++
T Consensus 159 ~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 159 LMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred EEECCCHHHHHHHHHCCCe
Confidence 9999999766544455554
No 28
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.15 E-value=0.0058 Score=53.59 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=70.3
Q ss_pred EEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcE
Q 022210 166 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 241 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~v 241 (301)
.+..+||+.++|+.+.+ .+.++|.|++...+++.+++.++-.+ +|...+..+...... ..+.+-++.+|.+.+++
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 161 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM 161 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence 35689999999999985 59999999999999999999987654 576666555432222 13556677889999999
Q ss_pred EEEECCchhcccCCCceee
Q 022210 242 AIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 242 IIVDdsp~~~~~qp~N~I~ 260 (301)
++|+|++.-...-...|++
T Consensus 162 ~~igDs~~d~~aa~~aG~~ 180 (213)
T TIGR01449 162 VYVGDSRVDIQAARAAGCP 180 (213)
T ss_pred EEeCCCHHHHHHHHHCCCe
Confidence 9999998766433333443
No 29
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.12 E-value=0.0073 Score=53.13 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=72.7
Q ss_pred EEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcE
Q 022210 166 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 241 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~v 241 (301)
.+...||+.++|+++.+ .+.++|.|++...++..+++.++-.+ +|...+..+++.... ..+.+=+..+|-+.+++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 35678999999999975 69999999999999999999987764 688777766653322 24455566778889999
Q ss_pred EEEECCchhcccCCCceeec
Q 022210 242 AIVDNTPQVFQLQVDNGIPI 261 (301)
Q Consensus 242 IIVDdsp~~~~~qp~N~I~I 261 (301)
++|+|++.-...-...|++.
T Consensus 152 l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeE
Confidence 99999987664444555553
No 30
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.11 E-value=0.0055 Score=57.22 Aligned_cols=93 Identities=12% Similarity=0.158 Sum_probs=74.3
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
+...||+.++|+.|.+ .+-++|-|++...++..+++.+.-.+ +|...+..+++..... .|.+=+.++|-+.++++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 4568999999999985 59999999999999999999987654 7888888777654332 56677888899999999
Q ss_pred EEECCchhcccCCCceee
Q 022210 243 IVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I~ 260 (301)
+|+|++.-...-...|+.
T Consensus 187 ~IgDs~~Di~aA~~aG~~ 204 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMK 204 (260)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999998766443444443
No 31
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=96.03 E-value=0.0032 Score=54.51 Aligned_cols=82 Identities=22% Similarity=0.237 Sum_probs=64.5
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccce-------eCCcccccccccCCCCC
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF-------ADGEYLKDLTILGRDLA 239 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~-------~~g~~iKDLs~Lgrdls 239 (301)
+...||+.++|++|. +.++|.|++...++..+++.++-. .+|...+..+.... ....|.+=+..+|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIE-DCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcH-hhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 446799999999997 689999999999999999998654 37877776554332 22245566777899999
Q ss_pred cEEEEECCchhc
Q 022210 240 RIAIVDNTPQVF 251 (301)
Q Consensus 240 ~vIIVDdsp~~~ 251 (301)
++++|+|++...
T Consensus 160 ~~l~vgD~~~di 171 (184)
T TIGR01993 160 RAIFFDDSARNI 171 (184)
T ss_pred ceEEEeCCHHHH
Confidence 999999998654
No 32
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.94 E-value=0.0079 Score=55.16 Aligned_cols=94 Identities=15% Similarity=0.229 Sum_probs=74.6
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
+...||+.++|++|.+ .+.+.|-|++...++..+++.++-.. +|...+..+++..... .|.+=+..+|-+.++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 4568999999999964 69999999999999999999997764 7888888777654322 46677788898999999
Q ss_pred EEECCchhcccCCCceeec
Q 022210 243 IVDNTPQVFQLQVDNGIPI 261 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I~I 261 (301)
+|+|++.-...-...|++.
T Consensus 186 ~vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred EEcCCHHHHHHHHHCCCEE
Confidence 9999997664434455543
No 33
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.85 E-value=0.017 Score=50.37 Aligned_cols=83 Identities=16% Similarity=0.177 Sum_probs=65.2
Q ss_pred EeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEEE
Q 022210 168 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 168 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vII 243 (301)
...||+.++|+++.+. |.++|-|++...++..+++.+.-. .+|...+..+...... ..|.+=+..+|-+++++++
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 4679999999999986 999999999999999999988643 3677777765543322 2445556677889999999
Q ss_pred EECCchhc
Q 022210 244 VDNTPQVF 251 (301)
Q Consensus 244 VDdsp~~~ 251 (301)
|+|++.-.
T Consensus 171 vgD~~~Di 178 (198)
T TIGR01428 171 VASNPWDL 178 (198)
T ss_pred EeCCHHHH
Confidence 99998544
No 34
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=95.83 E-value=0.036 Score=53.04 Aligned_cols=123 Identities=17% Similarity=0.147 Sum_probs=82.2
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCc-eEEEEcCCchHHHHHHHHHHCCCCceeeeEEecC
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMF-DVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD 218 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~f-EIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe 218 (301)
.++-.+|+|||+|++.-..+ +.+ .=|.+.+-|..+.+.+ -+++||.|.+++|..-++.+.-.+ +|.-.+.+.
T Consensus 120 ~~phVIVfDlD~TLItd~~~-----v~I-r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~-~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD-----VRI-RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEG-YFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCc-----ccc-CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCcc-ccEEEEeCC
Confidence 56679999999999843211 111 2388999999999765 899999999999999999998775 788888754
Q ss_pred cccee----------------CCcccccccc---c--------------CCCC-CcEEEEECCchhcccCCCceeeccCc
Q 022210 219 SCVFA----------------DGEYLKDLTI---L--------------GRDL-ARIAIVDNTPQVFQLQVDNGIPIESW 264 (301)
Q Consensus 219 ~C~~~----------------~g~~iKDLs~---L--------------grdl-s~vIIVDdsp~~~~~qp~N~I~I~~f 264 (301)
.-.-. ...+..|... | |-.- +.+-+|||-+..= +.-||-|.++..
T Consensus 193 ~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn-~~YD~FVnvkrc 271 (297)
T PF05152_consen 193 NKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNN-YSYDYFVNVKRC 271 (297)
T ss_pred ccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccC-ccceeEEEeccC
Confidence 43221 1122334333 2 2222 3455888877533 466788777776
Q ss_pred cCCCCC
Q 022210 265 FGDPSD 270 (301)
Q Consensus 265 ~gd~~D 270 (301)
---.+|
T Consensus 272 p~P~~D 277 (297)
T PF05152_consen 272 PVPVND 277 (297)
T ss_pred CCCchH
Confidence 544443
No 35
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=95.77 E-value=0.012 Score=52.19 Aligned_cols=94 Identities=14% Similarity=0.192 Sum_probs=64.0
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccc-----------ee-CC-ccccccc
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCV-----------FA-DG-EYLKDLT 232 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~-----------~~-~g-~~iKDLs 232 (301)
+..+||+.+||+.+.+ .+.++|-|++...++..+++.+.-.. +|...+.-++.. .. ++ .+.+=+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 3479999999999996 59999999999999999999986553 554433211111 00 11 2223344
Q ss_pred ccCCCCCcEEEEECCchhcccCCCceeec
Q 022210 233 ILGRDLARIAIVDNTPQVFQLQVDNGIPI 261 (301)
Q Consensus 233 ~Lgrdls~vIIVDdsp~~~~~qp~N~I~I 261 (301)
.+|-+.+++++|+|++.-...-..-|+.+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 56788899999999987664433334444
No 36
>PRK09449 dUMP phosphatase; Provisional
Probab=95.75 E-value=0.017 Score=51.33 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=65.4
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCC-CCCcEE
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGR-DLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgr-dls~vI 242 (301)
+...||+.++|++|.+.|-+.|-|++...++..+++.+.-.+ +|...+..+++.... ..|.+=++.+|- +.++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 447899999999999889999999999999999999876654 688887776654332 245666777885 557899
Q ss_pred EEECCch
Q 022210 243 IVDNTPQ 249 (301)
Q Consensus 243 IVDdsp~ 249 (301)
+|+|++.
T Consensus 173 ~vgD~~~ 179 (224)
T PRK09449 173 MVGDNLH 179 (224)
T ss_pred EEcCCcH
Confidence 9999974
No 37
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=95.74 E-value=0.033 Score=47.06 Aligned_cols=72 Identities=17% Similarity=0.025 Sum_probs=53.6
Q ss_pred cEEEEecCCceeeeeecCeeeeE-EEEeCchHHHHHHHH-HhCceEEEEcCCchHHHH------------HHHHHHCCCC
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTV-FVRQRPYLHMFLEAV-ASMFDVVIFTAGQSIYAG------------QLLDILDPNQ 208 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~-~V~~RP~l~eFL~~l-s~~fEIvIfTas~~~YA~------------~vld~LDp~~ 208 (301)
+.+++|||+|+..- + ...+ .....|.+.+.|+.+ .+-++|++.|+-...... .+++.|+.++
T Consensus 2 K~i~~DiDGTL~~~---~-~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 2 KRLVMDLDNTITLT---E-NGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred CEEEEeCCCCcccC---C-CCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 47899999998521 1 1111 134688999999998 467999999999888876 7888998888
Q ss_pred ceeeeEEecC
Q 022210 209 TLIGQRVYRD 218 (301)
Q Consensus 209 ~~f~~rlyRe 218 (301)
-.+...+.|.
T Consensus 78 ipYd~l~~~k 87 (126)
T TIGR01689 78 VPYDEIYVGK 87 (126)
T ss_pred CCCceEEeCC
Confidence 6666666654
No 38
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.66 E-value=0.034 Score=54.65 Aligned_cols=117 Identities=15% Similarity=0.083 Sum_probs=73.3
Q ss_pred CCcEEEEecCCceeeeeec--CeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCC---------------chHHHHHHHH
Q 022210 141 LPITLVLDLDDFSFPIHSK--MEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG---------------QSIYAGQLLD 202 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~--~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas---------------~~~YA~~vld 202 (301)
+++.|+||-|+|++.-... .....-.+...||+.++|++|.+ .|.++|.|+. ...++..+++
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~ 80 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE 80 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence 4789999999998754211 11223357889999999999986 5999999994 2344555555
Q ss_pred HHCCCCceeeeEEec-----CccceeCC---cccccccccCCCCCcEEEEECCchhcccCCCceee
Q 022210 203 ILDPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 203 ~LDp~~~~f~~rlyR-----e~C~~~~g---~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~ 260 (301)
.+ +..|...++. +.|..... .+..-+..++-+++++++|-|+..-...-..+|+.
T Consensus 81 ~~---gl~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 81 SQ---GIKFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred Hc---CCceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 54 3335444443 34433222 12222344577899999999998655333334443
No 39
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.61 E-value=0.016 Score=50.45 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=66.7
Q ss_pred CCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCc-hHHHHHHHHHHCCCCceeeeEEe
Q 022210 139 AGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ-SIYAGQLLDILDPNQTLIGQRVY 216 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~-~~YA~~vld~LDp~~~~f~~rly 216 (301)
..+-..+|+|+|+++..-. -...-|++.++|++|.+. +.++|.|++. ...+..+++.++-.. +.
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~--------~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~------~~ 87 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD--------HNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV------LP 87 (170)
T ss_pred HCCCCEEEEecCCccccCC--------CCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE------Ec
Confidence 3566889999999875321 113479999999999865 9999999998 677877777664321 11
Q ss_pred cCccceeCCcccccccccCCCCCcEEEEECCch
Q 022210 217 RDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 249 (301)
Q Consensus 217 Re~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~ 249 (301)
.........+.+=+..+|-+.+++++|+|+..
T Consensus 88 -~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~ 119 (170)
T TIGR01668 88 -HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLF 119 (170)
T ss_pred -CCCCCChHHHHHHHHHcCCCHHHEEEECCcch
Confidence 11111222344556677888999999999973
No 40
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.58 E-value=0.083 Score=46.06 Aligned_cols=104 Identities=16% Similarity=0.169 Sum_probs=64.4
Q ss_pred CCcEEEEecCCceeeeeecC----eeeeEEEEeCchHHHHHHHHH-hCceEEEEcCCchH------------HHHHHHHH
Q 022210 141 LPITLVLDLDDFSFPIHSKM----EVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSI------------YAGQLLDI 203 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~~----~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~------------YA~~vld~ 203 (301)
.++++++|+|+|++...... .... +...-||+.+.|+.|. +.|.++|-|++... ++..+++.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~-~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~ 90 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASD-WRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK 90 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHH-eEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence 35778999999987432100 0011 1124599999999997 57999999997763 56677777
Q ss_pred HCCCCceeeeEEecCcccee---CCcccccccccC--CCCCcEEEEECCc
Q 022210 204 LDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILG--RDLARIAIVDNTP 248 (301)
Q Consensus 204 LDp~~~~f~~rlyRe~C~~~---~g~~iKDLs~Lg--rdls~vIIVDdsp 248 (301)
+.-. +...+.-+..... .+.+..=+..+| -+.+++++|.|++
T Consensus 91 ~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 91 LKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred cCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 7543 2222222221111 112333345566 7889999999986
No 41
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=95.47 E-value=0.032 Score=49.39 Aligned_cols=106 Identities=15% Similarity=0.233 Sum_probs=58.9
Q ss_pred CcEEEEecCCceeeeee----------cCe------eeeEEEEeCchHHHHHHHHHh-CceEEEEc-CCchHHHHHHHHH
Q 022210 142 PITLVLDLDDFSFPIHS----------KME------VQTVFVRQRPYLHMFLEAVAS-MFDVVIFT-AGQSIYAGQLLDI 203 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~----------~~~------~~~~~V~~RP~l~eFL~~ls~-~fEIvIfT-as~~~YA~~vld~ 203 (301)
++.+|+|||.|+.+... ... ..+.-|.+-|++...|+.+.. ...|.+=| +.....|.++|+.
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~ 82 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL 82 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh
Confidence 57899999977654321 111 234568889999999999995 68999888 4567899999999
Q ss_pred HCCC-----C----ceeeeE-EecCccceeCCccccccc-ccCCCCCcEEEEECCchhc
Q 022210 204 LDPN-----Q----TLIGQR-VYRDSCVFADGEYLKDLT-ILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 204 LDp~-----~----~~f~~r-lyRe~C~~~~g~~iKDLs-~Lgrdls~vIIVDdsp~~~ 251 (301)
|+-. + .+|.+. +|.. ....+++.|. ..|-+.+.++++||.....
T Consensus 83 l~i~~~~~~~~~~~~~F~~~eI~~g----sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 83 LEIDDADGDGVPLIEYFDYLEIYPG----SKTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp TT-C----------CCECEEEESSS-----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred cCCCccccccccchhhcchhheecC----chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 9766 1 133321 2221 1113444444 3488999999999987643
No 42
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=95.46 E-value=0.03 Score=49.38 Aligned_cols=86 Identities=19% Similarity=0.191 Sum_probs=64.4
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vI 242 (301)
...+||+.+||+.+.+ .+.++|.|++...++..+++.++-.. +|...+..+.+.... ..+.+=+..++.+.+++|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 4579999999999985 59999999999999999999987653 565555444332211 124455567788999999
Q ss_pred EEECCchhccc
Q 022210 243 IVDNTPQVFQL 253 (301)
Q Consensus 243 IVDdsp~~~~~ 253 (301)
+|+|++.....
T Consensus 171 ~igD~~~Di~~ 181 (226)
T PRK13222 171 FVGDSRNDIQA 181 (226)
T ss_pred EECCCHHHHHH
Confidence 99999875533
No 43
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.43 E-value=0.0094 Score=50.97 Aligned_cols=90 Identities=16% Similarity=0.159 Sum_probs=65.1
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
+...||+.++|+.+.+ .+.++|-|++ .+++.+++.+.-.+ +|...+..+....... .|.+=+..+|.+.+++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 5679999999999986 4888888887 78899998876553 6777776655433222 34555667788899999
Q ss_pred EEECCchhcccCCCcee
Q 022210 243 IVDNTPQVFQLQVDNGI 259 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I 259 (301)
+|+|++.....-..+|+
T Consensus 164 ~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 164 VFEDALAGVQAARAAGM 180 (185)
T ss_pred EEeCcHhhHHHHHHCCC
Confidence 99999865533333333
No 44
>PRK06769 hypothetical protein; Validated
Probab=95.31 E-value=0.032 Score=48.63 Aligned_cols=106 Identities=15% Similarity=0.125 Sum_probs=65.6
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHH-----HHHHHHHHCCCCceeeeEE
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY-----AGQLLDILDPNQTLIGQRV 215 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y-----A~~vld~LDp~~~~f~~rl 215 (301)
=..|.||+|+|+..-. .....--+..-||+.++|++|.+ -|.+.|-|++.... .......+...| |...+
T Consensus 4 ~~~~~~d~d~~~~~~~--~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g--~~~~~ 79 (173)
T PRK06769 4 IQAIFIDRDGTIGGDT--TIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFG--FDDIY 79 (173)
T ss_pred CcEEEEeCCCcccCCC--CCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCC--cCEEE
Confidence 3578999999985321 11111124567999999999985 59999999876421 112333343333 22322
Q ss_pred e-c----Ccccee---CCcccccccccCCCCCcEEEEECCchhc
Q 022210 216 Y-R----DSCVFA---DGEYLKDLTILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 216 y-R----e~C~~~---~g~~iKDLs~Lgrdls~vIIVDdsp~~~ 251 (301)
. - +.+... .+.+.+-+..+|-+++++++|+|++.-.
T Consensus 80 ~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di 123 (173)
T PRK06769 80 LCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDI 123 (173)
T ss_pred ECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHH
Confidence 2 1 111111 2356677777899999999999998754
No 45
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=95.28 E-value=0.014 Score=50.15 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=68.4
Q ss_pred eCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEEEEE
Q 022210 169 QRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAIVD 245 (301)
Q Consensus 169 ~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vIIVD 245 (301)
.-|++ +.|+.+.+.+.++|-|++.+.+++.+++.+.-.+ +|...+..+++..... .+.+-+.++|.+.+++|+|+
T Consensus 89 ~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ig 166 (188)
T PRK10725 89 PLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFE 166 (188)
T ss_pred CccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEe
Confidence 45764 8899998779999999999999999999997654 7888888777654333 35666677888899999999
Q ss_pred CCchhcccCCCcee
Q 022210 246 NTPQVFQLQVDNGI 259 (301)
Q Consensus 246 dsp~~~~~qp~N~I 259 (301)
|++.-+..-...|+
T Consensus 167 Ds~~di~aA~~aG~ 180 (188)
T PRK10725 167 DADFGIQAARAAGM 180 (188)
T ss_pred ccHhhHHHHHHCCC
Confidence 99876643333343
No 46
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.22 E-value=0.027 Score=52.22 Aligned_cols=83 Identities=17% Similarity=0.247 Sum_probs=63.7
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCc---------cceeCCcccccccccCCC
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS---------CVFADGEYLKDLTILGRD 237 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~---------C~~~~g~~iKDLs~Lgrd 237 (301)
++.=|-|+.||-.|.+.+ -++||.|.+..|.+++..|.-.. +|....|-+. |.-....|-|=....|-+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 667788999999999887 99999999999999999997664 6777766332 222233444555566766
Q ss_pred -CCcEEEEECCchhc
Q 022210 238 -LARIAIVDNTPQVF 251 (301)
Q Consensus 238 -ls~vIIVDdsp~~~ 251 (301)
..|++++|||....
T Consensus 177 ~p~~t~FfDDS~~NI 191 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNI 191 (244)
T ss_pred CcCceEEEcCchhhH
Confidence 99999999998765
No 47
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=95.20 E-value=0.045 Score=49.44 Aligned_cols=86 Identities=13% Similarity=-0.029 Sum_probs=66.5
Q ss_pred EEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcE
Q 022210 166 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI 241 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~v 241 (301)
.+...||+.++|+++.+. +-+.|-|++...++..+++.++-.. +|...+..+++..... .+.+-++.+|-+.+++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 456799999999999864 8999999999999999999886553 5666655555433221 3566677889999999
Q ss_pred EEEECCchhcc
Q 022210 242 AIVDNTPQVFQ 252 (301)
Q Consensus 242 IIVDdsp~~~~ 252 (301)
++|+|++.-..
T Consensus 172 l~IGDs~~Di~ 182 (229)
T PRK13226 172 VYVGDDERDIL 182 (229)
T ss_pred EEeCCCHHHHH
Confidence 99999987553
No 48
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=95.19 E-value=0.016 Score=50.91 Aligned_cols=98 Identities=12% Similarity=0.068 Sum_probs=68.5
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
...+||+.++|+.+.+ .|.++|-|++....+..++.....-..+|...++.+++..... .|.+=++.+|-++++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 4479999999999985 5999999999987766554432111235777776665554322 45666788899999999
Q ss_pred EEECCchhcccCCCceeeccCc
Q 022210 243 IVDNTPQVFQLQVDNGIPIESW 264 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I~I~~f 264 (301)
+|||++.....-...|+..--+
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~ 184 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILV 184 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEe
Confidence 9999987654334455554433
No 49
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=95.18 E-value=0.04 Score=50.18 Aligned_cols=94 Identities=14% Similarity=-0.024 Sum_probs=69.8
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCC-CCCcE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGR-DLARI 241 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgr-dls~v 241 (301)
+...||+.++|++|.+ .+.+.|-|++...+++.+++.+.-.+..|...+..+...... ..|.+-+..+|- +.+++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 4578999999999975 599999999999999999999876653236666666543322 245667778887 48999
Q ss_pred EEEECCchhcccCCCceee
Q 022210 242 AIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 242 IIVDdsp~~~~~qp~N~I~ 260 (301)
|+|.|++.-...-...|+.
T Consensus 178 l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred EEECCcHHHHHHHHHCCCe
Confidence 9999999766443344443
No 50
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=95.08 E-value=0.024 Score=50.57 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=71.7
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
....||+.++|+.+.+ -+.++|.|++...+++.+++.+.-.+ +|...+..+....... .+..=+..+|.+.++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 3467999999999985 59999999999999999999987654 6877777665433222 45566677899999999
Q ss_pred EEECCchhcccCCCceeec
Q 022210 243 IVDNTPQVFQLQVDNGIPI 261 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I~I 261 (301)
+|+|++.-...-...|++.
T Consensus 170 ~igDs~~Di~aA~~aG~~~ 188 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRS 188 (222)
T ss_pred EEcCChhhHHHHHHcCCEE
Confidence 9999997664444445443
No 51
>PRK11587 putative phosphatase; Provisional
Probab=95.02 E-value=0.056 Score=48.22 Aligned_cols=93 Identities=15% Similarity=0.082 Sum_probs=67.1
Q ss_pred EEEeCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcE
Q 022210 166 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 241 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~v 241 (301)
.+...||+.++|+.|. +.+.+.|-|++...++..+++...-. .+...+..++..... ..|.+-+..+|-.++++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~ 158 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC 158 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE
Confidence 3557999999999997 46999999999998888877766432 344555555443322 25667778889999999
Q ss_pred EEEECCchhcccCCCceee
Q 022210 242 AIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 242 IIVDdsp~~~~~qp~N~I~ 260 (301)
|+|+|++.....-...|+.
T Consensus 159 l~igDs~~di~aA~~aG~~ 177 (218)
T PRK11587 159 VVVEDAPAGVLSGLAAGCH 177 (218)
T ss_pred EEEecchhhhHHHHHCCCE
Confidence 9999999765433344443
No 52
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=94.99 E-value=0.047 Score=47.17 Aligned_cols=84 Identities=13% Similarity=0.179 Sum_probs=58.6
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecC-ccceeCCc------------cccccc
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD-SCVFADGE------------YLKDLT 232 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe-~C~~~~g~------------~iKDLs 232 (301)
+..+||+.++|+.+.+ -+.++|-|++...+++.+++.+.... +|...+..+ ........ +.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 3579999999999985 69999999999999999999987543 555444322 11111100 111133
Q ss_pred ccCCCCCcEEEEECCchhc
Q 022210 233 ILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 233 ~Lgrdls~vIIVDdsp~~~ 251 (301)
.+|.+.+++|+|.|+..-.
T Consensus 158 ~~~~~~~~~i~iGDs~~D~ 176 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDL 176 (201)
T ss_pred HhCCCHHHEEEEcCCHhHH
Confidence 4577889999999998544
No 53
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=94.96 E-value=0.031 Score=50.59 Aligned_cols=93 Identities=13% Similarity=0.119 Sum_probs=70.5
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
+...||+.++|+.+.+ .+-+.|-|++...++...++.+.-. .+|...+..+....... .|.+=+.++|-+.++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 4578999999999986 5999999999999999999887544 36777776554432221 35566778899999999
Q ss_pred EEECCchhcccCCCceee
Q 022210 243 IVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I~ 260 (301)
+|+|++.....-...|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999766444445553
No 54
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=94.94 E-value=0.038 Score=47.27 Aligned_cols=108 Identities=13% Similarity=0.044 Sum_probs=70.8
Q ss_pred cEEEEecCCceeeeee---cCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecC
Q 022210 143 ITLVLDLDDFSFPIHS---KMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD 218 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~---~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe 218 (301)
+.+++|+|+|++.-+. ......-++..+|+. -+++|.+ .+.++|-|+.....+..+++.+.-.. +|..
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-~~~~----- 73 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-LYQG----- 73 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-EEec-----
Confidence 4688999999986321 122222345678876 6888875 69999999999999999999886542 3331
Q ss_pred ccceeCCc-ccccccccCCCCCcEEEEECCchhcccCCCceee
Q 022210 219 SCVFADGE-YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 219 ~C~~~~g~-~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~ 260 (301)
...... +.+=+..+|-+.+++++|-|+..-...-...|+.
T Consensus 74 --~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 74 --QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred --ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 111122 2233355688889999999998765443333443
No 55
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=94.93 E-value=0.033 Score=55.32 Aligned_cols=86 Identities=9% Similarity=0.089 Sum_probs=71.5
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
+...||+.+||+.|.+ .+.+.|-|++...+++.+++.+.-.. +|...+..+++..... .|.+-+..+|.+.+++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 3467999999999975 59999999999999999999997654 7998888888754332 56777888899999999
Q ss_pred EEECCchhccc
Q 022210 243 IVDNTPQVFQL 253 (301)
Q Consensus 243 IVDdsp~~~~~ 253 (301)
+|+|++.....
T Consensus 294 ~IGDS~~DIeA 304 (381)
T PLN02575 294 VFGNSNQTVEA 304 (381)
T ss_pred EEcCCHHHHHH
Confidence 99999876533
No 56
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=94.62 E-value=0.03 Score=50.83 Aligned_cols=84 Identities=18% Similarity=0.213 Sum_probs=72.7
Q ss_pred EEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vI 242 (301)
+...||+.+||+.|... .-+.+=|++.+..+..+++.+.-.. +|..++++++..... ..|.+-..+||.+++++|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 45799999999999977 9999999999999999999997765 688888877766653 368899999999999999
Q ss_pred EEECCchhc
Q 022210 243 IVDNTPQVF 251 (301)
Q Consensus 243 IVDdsp~~~ 251 (301)
+|+|++.-.
T Consensus 164 viEDs~~Gi 172 (221)
T COG0637 164 VVEDSPAGI 172 (221)
T ss_pred EEecchhHH
Confidence 999998654
No 57
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.61 E-value=0.1 Score=43.48 Aligned_cols=77 Identities=16% Similarity=0.050 Sum_probs=59.3
Q ss_pred eCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEEEE
Q 022210 169 QRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAIV 244 (301)
Q Consensus 169 ~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vIIV 244 (301)
..||+.++|+.+. +.+.+.|.|++.+.++..+++.+ - ..+|...+..++.. .. ..+.+=+..+|.+. ++++|
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~i 140 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHV 140 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEE
Confidence 4599999999996 56999999999999999999995 2 34677777666654 22 23455566778877 99999
Q ss_pred ECCch
Q 022210 245 DNTPQ 249 (301)
Q Consensus 245 Ddsp~ 249 (301)
.|++.
T Consensus 141 GDs~~ 145 (154)
T TIGR01549 141 GDNLN 145 (154)
T ss_pred eCCHH
Confidence 99964
No 58
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.57 E-value=0.068 Score=47.14 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=70.4
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEEE
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vII 243 (301)
+..-|++.++|+.+.+.|.++|.|.|...++...+..+. -..+|...++.+..-... -.|-.=+..+|-+.+.+++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~g-l~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLG-LLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcC-ChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 567899999999999889999999999999999999986 345788888877766443 2456677788989999999
Q ss_pred EECCchhc
Q 022210 244 VDNTPQVF 251 (301)
Q Consensus 244 VDdsp~~~ 251 (301)
|||+...-
T Consensus 177 VgD~~~~d 184 (229)
T COG1011 177 VGDSLEND 184 (229)
T ss_pred ECCChhhh
Confidence 99998766
No 59
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=94.52 E-value=0.092 Score=45.99 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=63.2
Q ss_pred eCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCcccee--CCcccccccccCCCCCcEEEEE
Q 022210 169 QRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA--DGEYLKDLTILGRDLARIAIVD 245 (301)
Q Consensus 169 ~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~--~g~~iKDLs~Lgrdls~vIIVD 245 (301)
..|+..++|+.+.+ -+.++|-|++.+.+++.+++.+.-. .+|...+..++.... ...+.+-+..+|-+.+++|+|.
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence 46677999999986 4999999999999999999999765 478777776654331 1234566677788999999999
Q ss_pred CCch
Q 022210 246 NTPQ 249 (301)
Q Consensus 246 dsp~ 249 (301)
|++.
T Consensus 186 D~~~ 189 (197)
T TIGR01548 186 DTVD 189 (197)
T ss_pred CCHH
Confidence 9874
No 60
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=94.24 E-value=0.054 Score=50.59 Aligned_cols=92 Identities=12% Similarity=0.087 Sum_probs=67.5
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
+..+||+.++|+.+.+ .+.++|.|++...++..+++.+.-. .+|...+..+.+..... .+.+=+..+|-+.+++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 4578999999999975 6999999999999999999987654 36776666554332211 23344556788999999
Q ss_pred EEECCchhcccCCCcee
Q 022210 243 IVDNTPQVFQLQVDNGI 259 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I 259 (301)
+|+|++.-...-..+|+
T Consensus 179 ~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGV 195 (272)
T ss_pred EECCCHHHHHHHHHCCC
Confidence 99999876644344454
No 61
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.18 E-value=0.092 Score=45.88 Aligned_cols=79 Identities=11% Similarity=0.006 Sum_probs=59.2
Q ss_pred EeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEEE
Q 022210 168 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI 243 (301)
Q Consensus 168 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vII 243 (301)
..-||+.++|++|.+ .+.++|.|++...+ ..+++.+.-. .+|...+..+.+..... .+.+=++.+|.+.+++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLL-EYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcH-HhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 568999999999986 49999999987754 6777776543 36777766555433322 355666778999999999
Q ss_pred EECCc
Q 022210 244 VDNTP 248 (301)
Q Consensus 244 VDdsp 248 (301)
|+|++
T Consensus 183 IgD~~ 187 (203)
T TIGR02252 183 IGDSL 187 (203)
T ss_pred ECCCc
Confidence 99986
No 62
>COG4996 Predicted phosphatase [General function prediction only]
Probab=94.11 E-value=0.32 Score=42.10 Aligned_cols=133 Identities=17% Similarity=0.044 Sum_probs=87.9
Q ss_pred EEEEecCCceeeee-------------ec--CeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCC
Q 022210 144 TLVLDLDDFSFPIH-------------SK--MEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 144 tLVLDLDd~l~~v~-------------~~--~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
.+|+|+|.|+..-+ .+ ....+.-|.+||++.+||+.+... |-+-.+|=.-..-|-+++.++|-.
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 46899997664321 00 113456788999999999999964 777788888899999999999988
Q ss_pred CceeeeEEecCccceeCCccccccc------ccCCCCCcEEEEECCchhc---ccCCCceeeccCccCCCCCHHHHHHHH
Q 022210 208 QTLIGQRVYRDSCVFADGEYLKDLT------ILGRDLARIAIVDNTPQVF---QLQVDNGIPIESWFGDPSDSALLSLLM 278 (301)
Q Consensus 208 ~~~f~~rlyRe~C~~~~g~~iKDLs------~Lgrdls~vIIVDdsp~~~---~~qp~N~I~I~~f~gd~~D~eLl~L~~ 278 (301)
. +|.+.....+=... -...+=|. .+---++++|.+||+...+ ....+|.=.++.|.+= ..-..+.+
T Consensus 82 ~-yFhy~ViePhP~K~-~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di---~c~~ei~s 156 (164)
T COG4996 82 Q-YFHYIVIEPHPYKF-LMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDI---SCYSEIFS 156 (164)
T ss_pred h-hEEEEEecCCChhH-HHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecch---HHHHHHHH
Confidence 5 78777665542210 00111111 1234678999999998766 3467788888888654 22334455
Q ss_pred HHh
Q 022210 279 FLE 281 (301)
Q Consensus 279 ~L~ 281 (301)
+|.
T Consensus 157 lLs 159 (164)
T COG4996 157 LLS 159 (164)
T ss_pred HHH
Confidence 553
No 63
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=94.04 E-value=0.1 Score=46.09 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=68.7
Q ss_pred EEeCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCCC-CceeeeEEecCcccee---CCcccccccccCCC-CCc
Q 022210 167 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN-QTLIGQRVYRDSCVFA---DGEYLKDLTILGRD-LAR 240 (301)
Q Consensus 167 V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp~-~~~f~~rlyRe~C~~~---~g~~iKDLs~Lgrd-ls~ 240 (301)
....||+.++|++|. +.+.+.|-|++...++..+++.+.-. +.+|...+..++-... ...+.+=+.++|-. .++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 358999999999997 56999999999999999999998754 2577776665542211 12345556677775 799
Q ss_pred EEEEECCchhcccCCCceee
Q 022210 241 IAIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 241 vIIVDdsp~~~~~qp~N~I~ 260 (301)
+++|+|++.-...-...|+.
T Consensus 166 ~~~igD~~~Di~aa~~aG~~ 185 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAG 185 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCC
Confidence 99999998755333334444
No 64
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=93.97 E-value=0.21 Score=51.57 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=70.2
Q ss_pred CCCcEEEEecCCceeeeee----cCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCch------------HHHHHHHH
Q 022210 140 GLPITLVLDLDDFSFPIHS----KMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS------------IYAGQLLD 202 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~----~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~------------~YA~~vld 202 (301)
...+.+.||+|+|++.... ...... +..+-|++.+.|+.|.+ -|.|+|+|+... ..+..+++
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d-~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~ 244 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDD-WQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVA 244 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHH-eeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHH
Confidence 4568999999999985421 111112 22346999999999986 599999999776 46778888
Q ss_pred HHCCCCceeeeEEecCccceeC---Ccc---ccccc-ccCCCCCcEEEEECCc
Q 022210 203 ILDPNQTLIGQRVYRDSCVFAD---GEY---LKDLT-ILGRDLARIAIVDNTP 248 (301)
Q Consensus 203 ~LDp~~~~f~~rlyRe~C~~~~---g~~---iKDLs-~Lgrdls~vIIVDdsp 248 (301)
.++- .|...+.-+.|.+.. |.+ .+++. .++-+++++++|-|+.
T Consensus 245 ~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 245 KLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 8754 366555555554432 222 23332 2357899999999987
No 65
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=93.88 E-value=0.11 Score=48.00 Aligned_cols=93 Identities=15% Similarity=0.058 Sum_probs=68.2
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCC-CCcE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRD-LARI 241 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrd-ls~v 241 (301)
+..-||+.++|+.|.+ .+.+.|-|++.+..+..+++.+.-.+-.+...+..++..... ..|.+-+..+|-. .+.+
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 4567999999999975 599999999999999999998765542246666666643332 2456667778864 6899
Q ss_pred EEEECCchhcccCCCcee
Q 022210 242 AIVDNTPQVFQLQVDNGI 259 (301)
Q Consensus 242 IIVDdsp~~~~~qp~N~I 259 (301)
|+|+|++.-...-...|+
T Consensus 180 l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred EEEcCcHHHHHHHHHCCC
Confidence 999999976543333444
No 66
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=93.76 E-value=0.18 Score=45.03 Aligned_cols=86 Identities=9% Similarity=0.089 Sum_probs=55.7
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCc----------ccee----CCc-cccc
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS----------CVFA----DGE-YLKD 230 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~----------C~~~----~g~-~iKD 230 (301)
+..|||+.+||+.+.+ ...++|.|++...|++++++.+.....++..++.-.. |... .|. -.+=
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~ 148 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL 148 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence 5689999999999987 5999999999999999999998543333332222111 1100 000 0111
Q ss_pred ccccCCCCCcEEEEECCchhcc
Q 022210 231 LTILGRDLARIAIVDNTPQVFQ 252 (301)
Q Consensus 231 Ls~Lgrdls~vIIVDdsp~~~~ 252 (301)
+..++....++|+|-|+..-+.
T Consensus 149 l~~~~~~~~~~i~iGDg~~D~~ 170 (214)
T TIGR03333 149 IRKLSEPNDYHIVIGDSVTDVE 170 (214)
T ss_pred HHHHhhcCCcEEEEeCCHHHHH
Confidence 2223445678999999887654
No 67
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=93.71 E-value=0.082 Score=49.87 Aligned_cols=93 Identities=14% Similarity=0.162 Sum_probs=64.4
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCC--CceeeeEEecCccceeC---CcccccccccCCCCCc
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN--QTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLAR 240 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~--~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~ 240 (301)
+...||+.++|+++.+ .+.+.|-|++...++..+++.+.-. ...|.. +..+.+.... ..+.+=+..+|-+.++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~-v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDV-FAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEE-EeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 4679999999999985 6999999999999999999877311 112222 2344332221 1445556777889999
Q ss_pred EEEEECCchhcccCCCceee
Q 022210 241 IAIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 241 vIIVDdsp~~~~~qp~N~I~ 260 (301)
+|+|+|++.-+..-...|+.
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~ 241 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMR 241 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCE
Confidence 99999999766443334433
No 68
>PHA02597 30.2 hypothetical protein; Provisional
Probab=93.69 E-value=0.065 Score=46.77 Aligned_cols=96 Identities=11% Similarity=0.105 Sum_probs=62.6
Q ss_pred EEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCC---ceeeeEEecCccceeCCcccccccccCCCCCcEE
Q 022210 166 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ---TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIA 242 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~---~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vI 242 (301)
.+...||+.++|++|.+.+.+++-|++.......++..+.-.+ .+|+..+..+.+......+.+=++.+| .+.+|
T Consensus 72 ~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v 149 (197)
T PHA02597 72 YLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVC 149 (197)
T ss_pred hccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEE
Confidence 3567999999999999878777777766555554555553221 145666665554332233444556667 67899
Q ss_pred EEECCchhcccCCCc--eeeccC
Q 022210 243 IVDNTPQVFQLQVDN--GIPIES 263 (301)
Q Consensus 243 IVDdsp~~~~~qp~N--~I~I~~ 263 (301)
+|||++.....-... ||+.--
T Consensus 150 ~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 150 FVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred EeCCCHHHHHHHHHHHcCCcEEE
Confidence 999999876544455 665443
No 69
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=93.63 E-value=0.28 Score=43.91 Aligned_cols=95 Identities=12% Similarity=0.106 Sum_probs=60.2
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeE--EecCcccee------------CC-ccccc
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQR--VYRDSCVFA------------DG-EYLKD 230 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~r--lyRe~C~~~------------~g-~~iKD 230 (301)
+..+||+.+||+.+.+ .+.++|.|++...|++++++.+-+...++... +..+..... .| ...+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 4579999999999985 59999999999999999999872122233222 111111100 01 11233
Q ss_pred ccccCCCCCcEEEEECCchhcccCCCceeec
Q 022210 231 LTILGRDLARIAIVDNTPQVFQLQVDNGIPI 261 (301)
Q Consensus 231 Ls~Lgrdls~vIIVDdsp~~~~~qp~N~I~I 261 (301)
+..++.+..++|+|.|+..-...-...++.+
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~ 183 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVF 183 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence 3445667789999999987664433445533
No 70
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=93.53 E-value=0.064 Score=47.27 Aligned_cols=95 Identities=17% Similarity=0.076 Sum_probs=62.3
Q ss_pred EEEeCchHHHHHHHHHh-CceEEEEcCCchHH--HHHHHHHHCCCCceeeeEEecCcccee---CCcccccccccCCCCC
Q 022210 166 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY--AGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILGRDLA 239 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y--A~~vld~LDp~~~~f~~rlyRe~C~~~---~g~~iKDLs~Lgrdls 239 (301)
.+...||+.++|+.|.+ .|.++|.|++...+ +...+..+.- ..+|...+..+.+... ...|.+-++.+|-+.+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l-~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDI-MALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhh-HhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 35578999999999986 59999999987654 3222222221 1356666654443322 2245666778899999
Q ss_pred cEEEEECCchhcccCCCceeec
Q 022210 240 RIAIVDNTPQVFQLQVDNGIPI 261 (301)
Q Consensus 240 ~vIIVDdsp~~~~~qp~N~I~I 261 (301)
++++|||++.....-...|+..
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEE
Confidence 9999999987654333444443
No 71
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=93.52 E-value=0.067 Score=47.49 Aligned_cols=92 Identities=9% Similarity=0.069 Sum_probs=66.0
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceee-eEEecCcccee---CCcccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG-QRVYRDSCVFA---DGEYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~-~rlyRe~C~~~---~g~~iKDLs~Lgrdls~vI 242 (301)
+...||+.++|+.+. +.++|.|++.+.+++.+++..+-.. +|. ..+..++.... ...|.+=+..+|-..++++
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 456799999999994 8999999999999999998876653 564 34444433222 1245666777888999999
Q ss_pred EEECCchhcccCCCceeec
Q 022210 243 IVDNTPQVFQLQVDNGIPI 261 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I~I 261 (301)
+|+|++.....-...|+++
T Consensus 164 ~igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred EEeCcHhhHHHHHHCCCEE
Confidence 9999997653323344443
No 72
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=93.50 E-value=0.11 Score=48.95 Aligned_cols=93 Identities=11% Similarity=0.045 Sum_probs=64.6
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCCcccccccccCCCCCcEEEEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVD 245 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVD 245 (301)
+...||+.++|+.|.+ .+.+.|.|++...++..+++.++-.. +|...+..+.-......+.+=+..+|-+.+++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 3457999999999985 58999999999999999999997653 676554433211111123333445677889999999
Q ss_pred CCchhcccCCCceee
Q 022210 246 NTPQVFQLQVDNGIP 260 (301)
Q Consensus 246 dsp~~~~~qp~N~I~ 260 (301)
|++.-...-...|+.
T Consensus 220 Ds~~Di~aA~~AG~~ 234 (273)
T PRK13225 220 DETRDVEAARQVGLI 234 (273)
T ss_pred CCHHHHHHHHHCCCe
Confidence 998755333334443
No 73
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=93.48 E-value=0.12 Score=50.11 Aligned_cols=86 Identities=16% Similarity=0.191 Sum_probs=59.4
Q ss_pred EEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCc----------cce--eCCcccccc-c
Q 022210 167 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS----------CVF--ADGEYLKDL-T 232 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~----------C~~--~~g~~iKDL-s 232 (301)
+..+||+.++|+.+.+. +.++|.|++...+++.+.+.+.-.. .+...+--.. +.. .+...++.+ +
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 55799999999999864 9999999999999999999886542 2332221111 110 111223333 3
Q ss_pred ccCCCCCcEEEEECCchhccc
Q 022210 233 ILGRDLARIAIVDNTPQVFQL 253 (301)
Q Consensus 233 ~Lgrdls~vIIVDdsp~~~~~ 253 (301)
.+|-+++++|.|-|+..-..+
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m 279 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPM 279 (322)
T ss_pred HcCCChhhEEEEECCHHHHHH
Confidence 568899999999999876644
No 74
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=93.44 E-value=0.17 Score=48.24 Aligned_cols=105 Identities=18% Similarity=0.317 Sum_probs=67.7
Q ss_pred EEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHC---CCCceeeeEEec-Ccccee--CCc----ccc-----
Q 022210 166 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD---PNQTLIGQRVYR-DSCVFA--DGE----YLK----- 229 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LD---p~~~~f~~rlyR-e~C~~~--~g~----~iK----- 229 (301)
-+..|||+.+|++.|.+ ...++|+|+|...+++.++..+. +.-.+++.++-- ++.... .+. +-|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 36689999999999975 59999999999999999999764 333455555533 322221 111 112
Q ss_pred --cccccC--CCCCcEEEEECCchhccc-----CCCceeeccCccCCCCCH
Q 022210 230 --DLTILG--RDLARIAIVDNTPQVFQL-----QVDNGIPIESWFGDPSDS 271 (301)
Q Consensus 230 --DLs~Lg--rdls~vIIVDdsp~~~~~-----qp~N~I~I~~f~gd~~D~ 271 (301)
..+.++ .+.+++|+|-|+..-..+ +.+|.|.| .|..+.-+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~ 248 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE 248 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence 122335 688899999999875532 33455555 344443333
No 75
>PLN02940 riboflavin kinase
Probab=93.10 E-value=0.1 Score=51.33 Aligned_cols=84 Identities=7% Similarity=0.041 Sum_probs=66.8
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHH-HHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLD-ILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI 241 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld-~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~v 241 (301)
+...||+.++|++|.+ .+.+.|-|++.+.++..+++ ..+-. .+|...+..+++.... ..+.+-++.+|-+.+++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 3467999999999975 59999999999999998887 44433 4788888888765432 24566677788899999
Q ss_pred EEEECCchhc
Q 022210 242 AIVDNTPQVF 251 (301)
Q Consensus 242 IIVDdsp~~~ 251 (301)
++|+|++...
T Consensus 171 l~VGDs~~Di 180 (382)
T PLN02940 171 LVIEDSLPGV 180 (382)
T ss_pred EEEeCCHHHH
Confidence 9999998755
No 76
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=92.64 E-value=0.33 Score=45.13 Aligned_cols=109 Identities=11% Similarity=0.035 Sum_probs=64.7
Q ss_pred CCCcEEEEecCCceeeeee---cCee---------------e-------eEEEEeCchHHHHHHHHHh-CceEEEEcCC-
Q 022210 140 GLPITLVLDLDDFSFPIHS---KMEV---------------Q-------TVFVRQRPYLHMFLEAVAS-MFDVVIFTAG- 192 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~---~~~~---------------~-------~~~V~~RP~l~eFL~~ls~-~fEIvIfTas- 192 (301)
++++.+++|||+|++.-.- .|.. . .-.....|++.+||+++.+ -+.++|-|+.
T Consensus 61 ~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~ 140 (237)
T TIGR01672 61 RPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRT 140 (237)
T ss_pred CCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4567999999998864221 0000 0 0112233449999999986 5999999998
Q ss_pred ---chHHHHHHHHHHCCCCceeeeEEecCccceeCCcccccccccCCCCCcEEEEECCchhccc
Q 022210 193 ---QSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQL 253 (301)
Q Consensus 193 ---~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~ 253 (301)
.+.+++.+++.+.-.. +|...+..+.... ...-|. ..+ ....-+|+|-|+..-+..
T Consensus 141 ~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~--~Kp~~~-~~l-~~~~i~i~vGDs~~DI~a 199 (237)
T TIGR01672 141 PGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQ--YQYTKT-QWI-QDKNIRIHYGDSDNDITA 199 (237)
T ss_pred CCcCHHHHHHHHHHhCCch-heeEEECCCCCCC--CCCCHH-HHH-HhCCCeEEEeCCHHHHHH
Confidence 6679999999887654 5544444333221 111111 111 112336888888776633
No 77
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=92.43 E-value=0.11 Score=44.34 Aligned_cols=82 Identities=12% Similarity=0.106 Sum_probs=58.1
Q ss_pred EeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCcccee---CCcccccccccCCCCCcEEE
Q 022210 168 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 168 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~---~g~~iKDLs~Lgrdls~vII 243 (301)
...||+.++|++|.+ .+.+.|-|++. .+..+++.+.-.. +|...+..++-... ...|.+-+..+|.+.+++|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 467999999999975 58999888754 4567788876553 67766654332111 12455667777889999999
Q ss_pred EECCchhcc
Q 022210 244 VDNTPQVFQ 252 (301)
Q Consensus 244 VDdsp~~~~ 252 (301)
|+|++....
T Consensus 164 vgD~~~di~ 172 (185)
T TIGR01990 164 IEDAQAGIE 172 (185)
T ss_pred EecCHHHHH
Confidence 999986553
No 78
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=91.79 E-value=0.41 Score=44.50 Aligned_cols=106 Identities=10% Similarity=0.026 Sum_probs=63.5
Q ss_pred CCCCcEEEEecCCceee---eeecCe------e----------------eeEEEEeCchHHHHHHHHH-hCceEEEEcCC
Q 022210 139 AGLPITLVLDLDDFSFP---IHSKME------V----------------QTVFVRQRPYLHMFLEAVA-SMFDVVIFTAG 192 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~---v~~~~~------~----------------~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas 192 (301)
.++++.+++|+|||++. ..+-+. . ...+....||+.+||+++. +-++|++-|+.
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR 139 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR 139 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45677999999998873 111110 0 0123444555999999994 67999999984
Q ss_pred ----chHHHHHHHHHHCC-CCceeeeEEecCccceeCC--cccccccccCCCCCcEEEEECCchhcc
Q 022210 193 ----QSIYAGQLLDILDP-NQTLIGQRVYRDSCVFADG--EYLKDLTILGRDLARIAIVDNTPQVFQ 252 (301)
Q Consensus 193 ----~~~YA~~vld~LDp-~~~~f~~rlyRe~C~~~~g--~~iKDLs~Lgrdls~vIIVDdsp~~~~ 252 (301)
...+++.+++.+.- ...+|...+..+.. .... ..++ ...-+|+|-|+..-+.
T Consensus 140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-~K~~K~~~l~-------~~~i~I~IGDs~~Di~ 198 (237)
T PRK11009 140 TATKTETVSKTLADDFHIPADNMNPVIFAGDKP-GQYTKTQWLK-------KKNIRIFYGDSDNDIT 198 (237)
T ss_pred CCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-CCCCHHHHHH-------hcCCeEEEcCCHHHHH
Confidence 46788888886654 22355444443321 1111 1222 2233788888876553
No 79
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=91.65 E-value=0.3 Score=44.69 Aligned_cols=85 Identities=14% Similarity=0.111 Sum_probs=60.6
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCC--CceeeeEEecCccce-eCCcccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN--QTLIGQRVYRDSCVF-ADGEYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~--~~~f~~rlyRe~C~~-~~g~~iKDLs~Lgrdls~vI 242 (301)
....|++.++|+++.+ -+.++|+|++...+...++...+.. ..+|...+....|.. ....|.+=+..+|-+.++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~l 173 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREIL 173 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHEE
Confidence 4578999999999975 6999999999999999888876311 123444332111111 11256666778899999999
Q ss_pred EEECCchhc
Q 022210 243 IVDNTPQVF 251 (301)
Q Consensus 243 IVDdsp~~~ 251 (301)
+|+|++...
T Consensus 174 fVgDs~~Di 182 (220)
T TIGR01691 174 FLSDIINEL 182 (220)
T ss_pred EEeCCHHHH
Confidence 999998754
No 80
>PRK08238 hypothetical protein; Validated
Probab=91.65 E-value=0.62 Score=47.59 Aligned_cols=89 Identities=13% Similarity=0.050 Sum_probs=56.6
Q ss_pred EeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCCc--ccccccccCCCCCcEEEE
Q 022210 168 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE--YLKDLTILGRDLARIAIV 244 (301)
Q Consensus 168 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~--~iKDLs~Lgrdls~vIIV 244 (301)
..+|++.++|+++.+ -+.++|-|++.+.+++++++++.- |...+..+......|. ..+=.+.++ .+.++++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~yv 145 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDYA 145 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeEe
Confidence 368999999999974 699999999999999999999843 5555554433222111 111111223 2446777
Q ss_pred ECCchhc--ccCCCceeecc
Q 022210 245 DNTPQVF--QLQVDNGIPIE 262 (301)
Q Consensus 245 Ddsp~~~--~~qp~N~I~I~ 262 (301)
-|+..-. ...-+|++.|.
T Consensus 146 GDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 146 GNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred cCCHHHHHHHHhCCCeEEEC
Confidence 7777533 22455666554
No 81
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=91.42 E-value=0.063 Score=45.69 Aligned_cols=76 Identities=13% Similarity=0.034 Sum_probs=59.1
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEEE
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vII 243 (301)
+..+||+.++|+. +.|.|++...++..+++.+.-. .+|...+..+...... ..|.+-++++|-+.+.+++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLP-WYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCH-HHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 3478999999994 7899999999999999998654 3677766665533322 2466777888999999999
Q ss_pred EECCch
Q 022210 244 VDNTPQ 249 (301)
Q Consensus 244 VDdsp~ 249 (301)
|+|++.
T Consensus 162 vgD~~~ 167 (175)
T TIGR01493 162 VAAHQW 167 (175)
T ss_pred EecChh
Confidence 999964
No 82
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=91.27 E-value=0.53 Score=41.37 Aligned_cols=111 Identities=15% Similarity=0.035 Sum_probs=66.4
Q ss_pred CCCcEEEEecCCceeee--eec--CeeeeEEEEeCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCCCCceeeeE
Q 022210 140 GLPITLVLDLDDFSFPI--HSK--MEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQR 214 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v--~~~--~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~r 214 (301)
+..+.+|+|+|+|++.- ... +.....+.. |.+ .=++.+. +.+.++|-|......+..+++.+.-.. +|.
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-~f~-- 92 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-LYQ-- 92 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-eec--
Confidence 35788999999998742 221 222222322 221 1233333 579999999999999999999985432 332
Q ss_pred EecCccceeCCcccccccccCCCCCcEEEEECCchhcccCCCceee
Q 022210 215 VYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 215 lyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~ 260 (301)
.+......+.+=+..+|.+.+.+++|-|+..-...--.-|+.
T Consensus 93 ----g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 93 ----GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred ----CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 111111123334456688899999999988755433333443
No 83
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=91.23 E-value=0.4 Score=40.74 Aligned_cols=49 Identities=10% Similarity=0.260 Sum_probs=40.4
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEe
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY 216 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rly 216 (301)
+..+||+.++|+.+.+ .+.++|-|++...+++.+++.++-.. +|...+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~ 120 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYS 120 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEec
Confidence 4589999999999976 59999999999999999999986543 5655553
No 84
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=90.73 E-value=0.38 Score=53.54 Aligned_cols=91 Identities=13% Similarity=0.130 Sum_probs=71.7
Q ss_pred eCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEEEE
Q 022210 169 QRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAIV 244 (301)
Q Consensus 169 ~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vIIV 244 (301)
.-||+.++|++|.+ -+.+.|.|++...+++.+++.+.-...+|...+..+++.... ..|.+-++.+|-+.+++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 47999999999975 599999999999999999999865434688888877765433 25667778889999999999
Q ss_pred ECCchhcccCCCcee
Q 022210 245 DNTPQVFQLQVDNGI 259 (301)
Q Consensus 245 Ddsp~~~~~qp~N~I 259 (301)
+|++.....-...|+
T Consensus 242 gDs~~Di~AA~~aGm 256 (1057)
T PLN02919 242 EDALAGVQAARAAGM 256 (1057)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999876543333343
No 85
>PLN02811 hydrolase
Probab=90.69 E-value=0.22 Score=44.45 Aligned_cols=93 Identities=11% Similarity=0.096 Sum_probs=62.8
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHH-HHHHHCCCCceeeeEEecC--cccee---CCcccccccccC---C
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQ-LLDILDPNQTLIGQRVYRD--SCVFA---DGEYLKDLTILG---R 236 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~-vld~LDp~~~~f~~rlyRe--~C~~~---~g~~iKDLs~Lg---r 236 (301)
+...||+.++|+.|.+ .+.+.|-|++.+.++.. +.+...-. .+|...++.+ ++... ...|.+=+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 3468999999999986 69999999998865543 33322212 3677778777 54332 224556666665 8
Q ss_pred CCCcEEEEECCchhcccCCCceee
Q 022210 237 DLARIAIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 237 dls~vIIVDdsp~~~~~qp~N~I~ 260 (301)
..+.+|+|+|++.-...-...|++
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCe
Confidence 899999999999765433333443
No 86
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=90.46 E-value=0.25 Score=43.07 Aligned_cols=83 Identities=20% Similarity=0.179 Sum_probs=56.1
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEe--------cCccceeCC--cccccccccCC
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY--------RDSCVFADG--EYLKDLTILGR 236 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rly--------Re~C~~~~g--~~iKDLs~Lgr 236 (301)
+..+||+.+||+.+.+.+.++|-|++...+++.+++.+.-.. +|...+. ...+....+ ..++ .++.
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~---~~~~ 142 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVK---ALKS 142 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHH---HHHH
Confidence 346899999999999779999999999999999999987542 4443332 111100011 1222 2334
Q ss_pred CCCcEEEEECCchhccc
Q 022210 237 DLARIAIVDNTPQVFQL 253 (301)
Q Consensus 237 dls~vIIVDdsp~~~~~ 253 (301)
...++++|-|+..-...
T Consensus 143 ~~~~~v~iGDs~~D~~~ 159 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTM 159 (205)
T ss_pred hCCeEEEEeCCHHHHHH
Confidence 44789999999886533
No 87
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=90.28 E-value=0.42 Score=45.23 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=64.2
Q ss_pred CCCcEEEEecCCceeeee-------ecCee----------eeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHH
Q 022210 140 GLPITLVLDLDDFSFPIH-------SKMEV----------QTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLL 201 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~-------~~~~~----------~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vl 201 (301)
.+|+.+|+|+|||++... .++.. ...-...-||+.+||+++.+ -..|+|-|+....+.+..+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~ 152 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATL 152 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHH
Confidence 357899999999986422 01111 01124457999999999975 5899999998877777666
Q ss_pred HHHCCCCc---eeeeEEecCccceeCCcccccccc--c--CCCCCcEEEEECCchhc
Q 022210 202 DILDPNQT---LIGQRVYRDSCVFADGEYLKDLTI--L--GRDLARIAIVDNTPQVF 251 (301)
Q Consensus 202 d~LDp~~~---~f~~rlyRe~C~~~~g~~iKDLs~--L--grdls~vIIVDdsp~~~ 251 (301)
..|...|- .+.+.+.|+.-. .|..++ + +..+ +++|.|+..-|
T Consensus 153 ~~Lkk~Gi~~~~~d~lllr~~~~------~K~~rr~~I~~~y~I--vl~vGD~~~Df 201 (266)
T TIGR01533 153 KNLKRFGFPQADEEHLLLKKDKS------SKESRRQKVQKDYEI--VLLFGDNLLDF 201 (266)
T ss_pred HHHHHcCcCCCCcceEEeCCCCC------CcHHHHHHHHhcCCE--EEEECCCHHHh
Confidence 66544442 235667775321 232221 1 2232 77788876655
No 88
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=90.12 E-value=0.47 Score=47.58 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=64.3
Q ss_pred EEeCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccce--eCCcccccccccCCCCCcEEE
Q 022210 167 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF--ADGEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 167 V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~--~~g~~iKDLs~Lgrdls~vII 243 (301)
+...||+.++|+++. +.+.+.|-|++...++..+++.++-.. +|...+..++... ....+.+-+..+ +++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 456899999999997 469999999999999999999987654 6777776655321 111333334444 3588999
Q ss_pred EECCchhcccCCCcee
Q 022210 244 VDNTPQVFQLQVDNGI 259 (301)
Q Consensus 244 VDdsp~~~~~qp~N~I 259 (301)
|.|++.-...-...|+
T Consensus 406 VGDs~~Di~aAk~AG~ 421 (459)
T PRK06698 406 VGDRLSDINAAKDNGL 421 (459)
T ss_pred EeCCHHHHHHHHHCCC
Confidence 9999876543333343
No 89
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=89.76 E-value=1.1 Score=37.92 Aligned_cols=48 Identities=19% Similarity=0.326 Sum_probs=39.2
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 215 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rl 215 (301)
+..||++.++|+.+.+ .+.++|.|++...|++++++.+.-. .++..++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~-~~~~~~~ 120 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID-DVFANRL 120 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc-hheeeeE
Confidence 3469999999999975 5999999999999999999998654 3454444
No 90
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=89.53 E-value=1.1 Score=39.87 Aligned_cols=101 Identities=18% Similarity=0.170 Sum_probs=62.7
Q ss_pred CCCCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCce---EEEEcCCc-------hHHHHHHHHHHCC
Q 022210 137 PIAGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFD---VVIFTAGQ-------SIYAGQLLDILDP 206 (301)
Q Consensus 137 ~~~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fE---IvIfTas~-------~~YA~~vld~LDp 206 (301)
.+..+-+.||+|+|.|+..-+. -..-|.+.+.++++.+.|- |+|+|.+. ..-|+.+-+.|.-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~--------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE--------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc--------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 4567889999999999864321 1257889999999998763 99999984 5667777777753
Q ss_pred CCceeeeEEecCccceeCCcccccccccCCCCCcEEEEECCc
Q 022210 207 NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 248 (301)
Q Consensus 207 ~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp 248 (301)
. .+.|+--...|...--.|.+.- ......+.+++|.|.-
T Consensus 108 p--vl~h~~kKP~~~~~i~~~~~~~-~~~~~p~eiavIGDrl 146 (168)
T PF09419_consen 108 P--VLRHRAKKPGCFREILKYFKCQ-KVVTSPSEIAVIGDRL 146 (168)
T ss_pred c--EEEeCCCCCccHHHHHHHHhhc-cCCCCchhEEEEcchH
Confidence 2 3444433333321000111111 0123578899998864
No 91
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=89.23 E-value=0.93 Score=40.72 Aligned_cols=124 Identities=20% Similarity=0.181 Sum_probs=81.9
Q ss_pred CcEEEEecCCceeeeeecCeeee-EEEEeCchHHHHHHHHHh-CceEEEEcCCc------------hHHHHHHHHHHCCC
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQT-VFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ------------SIYAGQLLDILDPN 207 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~-~~V~~RP~l~eFL~~ls~-~fEIvIfTas~------------~~YA~~vld~LDp~ 207 (301)
.++|+||.|+|+..-+ ....+. --....||+.+-|..+.+ -|-+||+|... ..+-+.++..|-..
T Consensus 5 ~k~lflDRDGtin~d~-~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~ 83 (181)
T COG0241 5 QKALFLDRDGTINIDK-GDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ 83 (181)
T ss_pred CcEEEEcCCCceecCC-CcccCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc
Confidence 6899999999986322 110000 014478999999999975 69999999843 34555677777777
Q ss_pred CceeeeEEecCc-----cceeC---CcccccccccCCCCCcEEEEECCchhccc----CCCceeeccCccCC
Q 022210 208 QTLIGQRVYRDS-----CVFAD---GEYLKDLTILGRDLARIAIVDNTPQVFQL----QVDNGIPIESWFGD 267 (301)
Q Consensus 208 ~~~f~~rlyRe~-----C~~~~---g~~iKDLs~Lgrdls~vIIVDdsp~~~~~----qp~N~I~I~~f~gd 267 (301)
|.-|..+++..| |.+.. |.+..=+...+-|+++.++|=|+..-... .-. ++.+..|.+.
T Consensus 84 gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~~~~~~~~~ 154 (181)
T COG0241 84 GVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GVLVLTGIGV 154 (181)
T ss_pred CCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ceEEEcCccc
Confidence 777889988333 66653 34444555567899999999998543321 122 5555555543
No 92
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=87.70 E-value=1.5 Score=39.92 Aligned_cols=94 Identities=12% Similarity=-0.002 Sum_probs=60.1
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHH--HHHHHHCCCCceeeeEEecC
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAG--QLLDILDPNQTLIGQRVYRD 218 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~--~vld~LDp~~~~f~~rlyRe 218 (301)
-..+++|+|+++.. + ...-||+.++|++|.+ .+.++|.|++.+..++ +.++.+.-....|...+...
T Consensus 8 ~~~~~~D~dG~l~~----~------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~ 77 (242)
T TIGR01459 8 YDVFLLDLWGVIID----G------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSG 77 (242)
T ss_pred CCEEEEeccccccc----C------CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccH
Confidence 45788999998752 2 1247999999999985 6999999999888776 66777765421455555543
Q ss_pred ccceeCCccccc-ccccCCCCCcEEEEECCc
Q 022210 219 SCVFADGEYLKD-LTILGRDLARIAIVDNTP 248 (301)
Q Consensus 219 ~C~~~~g~~iKD-Ls~Lgrdls~vIIVDdsp 248 (301)
.... .+++- +..+|.+.+++++|-|++
T Consensus 78 ~~~~---~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 78 EIAV---QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred HHHH---HHHHhhhhhccCCCceEEEeCCcc
Confidence 3221 12221 123344556666666654
No 93
>PTZ00445 p36-lilke protein; Provisional
Probab=87.24 E-value=0.9 Score=42.04 Aligned_cols=114 Identities=9% Similarity=0.114 Sum_probs=69.6
Q ss_pred CCCCcEEEEecCCceeeeeecCee------eeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHH-----------HHHH
Q 022210 139 AGLPITLVLDLDDFSFPIHSKMEV------QTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY-----------AGQL 200 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~~~------~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y-----------A~~v 200 (301)
..+-+.+++|||.|++.++..|-. ..+.-..||.+..+++.|.+ .+-|+|-|-|.+.- ++++
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~l 119 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRM 119 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHH
Confidence 356788999999999987643311 11233469999999999985 79999999888754 3334
Q ss_pred HHHHCC-CC---ceeee-----EEecCcccee------CC--c--c--cccccccCCCCCcEEEEECCchhcc
Q 022210 201 LDILDP-NQ---TLIGQ-----RVYRDSCVFA------DG--E--Y--LKDLTILGRDLARIAIVDNTPQVFQ 252 (301)
Q Consensus 201 ld~LDp-~~---~~f~~-----rlyRe~C~~~------~g--~--~--iKDLs~Lgrdls~vIIVDdsp~~~~ 252 (301)
+.+.-. .+ ++-.. +++++.-.+. .. . | -+=++..|.+++.+++|||++....
T Consensus 120 i~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVe 192 (219)
T PTZ00445 120 VEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCK 192 (219)
T ss_pred HHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHH
Confidence 443322 11 11111 1122221111 11 1 2 2233455899999999999998764
No 94
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=86.06 E-value=0.84 Score=40.78 Aligned_cols=117 Identities=16% Similarity=0.135 Sum_probs=79.4
Q ss_pred CCCCCCCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceee
Q 022210 134 LREPIAGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIG 212 (301)
Q Consensus 134 P~~~~~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~ 212 (301)
|......+-+.+++|||+|+++- ++.. .=|.+.+-+..+... --++|.|..++.=+..++..||-..-
T Consensus 20 ~~~L~~~Gikgvi~DlDNTLv~w--d~~~------~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi--- 88 (175)
T COG2179 20 PDILKAHGIKGVILDLDNTLVPW--DNPD------ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFI--- 88 (175)
T ss_pred HHHHHHcCCcEEEEeccCceecc--cCCC------CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCcee---
Confidence 44445688999999999999754 4433 368999999999966 99999999999989989888876521
Q ss_pred eEEecCccceeCCcccccccccCCCCCcEEEEECCch--hcccCCC--ceeeccCcc
Q 022210 213 QRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ--VFQLQVD--NGIPIESWF 265 (301)
Q Consensus 213 ~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~--~~~~qp~--N~I~I~~f~ 265 (301)
||. -.-..-.+-|-|...+-+.++|++|-|.-- ..+.|.. -.|.++|=.
T Consensus 89 ---~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~ 141 (175)
T COG2179 89 ---YRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLV 141 (175)
T ss_pred ---ecc-cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEec
Confidence 100 000011334566677888888888888643 3333332 256666643
No 95
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=85.69 E-value=1.9 Score=37.40 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=55.2
Q ss_pred EeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEec-Ccccee---CCc----c-----ccc-cc
Q 022210 168 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR-DSCVFA---DGE----Y-----LKD-LT 232 (301)
Q Consensus 168 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyR-e~C~~~---~g~----~-----iKD-Ls 232 (301)
..+|++.++|+.+.+ .+.++|-|++...+++.+++.+.-.. +|..++.- ++-.+. .|. . ++. +.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 479999999999975 59999999999999999999987654 56554432 211111 010 0 111 12
Q ss_pred ccCCCCCcEEEEECCchhc
Q 022210 233 ILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 233 ~Lgrdls~vIIVDdsp~~~ 251 (301)
..|.++++++.+-|++.-.
T Consensus 166 ~~~~~~~~~~~~gDs~~D~ 184 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDL 184 (202)
T ss_pred HcCCCHHHcEeeeCCcccH
Confidence 2356677888888877543
No 96
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=85.38 E-value=1.4 Score=39.66 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=40.5
Q ss_pred EeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEE
Q 022210 168 RQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 215 (301)
Q Consensus 168 ~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rl 215 (301)
..+||+.+|++.+.+.+.++|-|++...+++++++.+.-.. +|..++
T Consensus 68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l 114 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKL 114 (203)
T ss_pred CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceee
Confidence 46999999999999888999999999999999999997653 555443
No 97
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=84.35 E-value=2.6 Score=37.82 Aligned_cols=92 Identities=21% Similarity=0.133 Sum_probs=68.5
Q ss_pred EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC---cccccccccCCCCCcEE
Q 022210 167 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA 242 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g---~~iKDLs~Lgrdls~vI 242 (301)
...-||+.+.|..+.+ .|.+.|-|+.....++.+++.++-.. +|.....-+.+...++ ....-+..+|.+.+++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 4568999999999995 58999999999999999999988764 7776666333333322 33455566787767999
Q ss_pred EEECCchhcccCCCcee
Q 022210 243 IVDNTPQVFQLQVDNGI 259 (301)
Q Consensus 243 IVDdsp~~~~~qp~N~I 259 (301)
+|=|+..-...-...|+
T Consensus 167 ~VGDs~~Di~aA~~Ag~ 183 (220)
T COG0546 167 MVGDSLNDILAAKAAGV 183 (220)
T ss_pred EECCCHHHHHHHHHcCC
Confidence 99999886654444443
No 98
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=82.87 E-value=1.2 Score=39.06 Aligned_cols=78 Identities=21% Similarity=0.328 Sum_probs=43.9
Q ss_pred EeCchHHHHHHHHHhC-ceEEEEcCCchH----HHHHHHHHHCCC--CceeeeEEecCccceeCCcccccccccCCCCCc
Q 022210 168 RQRPYLHMFLEAVASM-FDVVIFTAGQSI----YAGQLLDILDPN--QTLIGQRVYRDSCVFADGEYLKDLTILGRDLAR 240 (301)
Q Consensus 168 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~----YA~~vld~LDp~--~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~ 240 (301)
..=||+.+.|++|.+. +++++-||.... -+..-.+.|+.+ +......++-.+ |. .++-|
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---------K~--~v~~D--- 138 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---------KT--LVGGD--- 138 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---------GG--GC--S---
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---------CC--eEecc---
Confidence 3459999999999987 588888887765 233444455433 111122222111 32 24433
Q ss_pred EEEEECCchhcccCCCceee
Q 022210 241 IAIVDNTPQVFQLQVDNGIP 260 (301)
Q Consensus 241 vIIVDdsp~~~~~qp~N~I~ 260 (301)
|+|||+|.....-...|++
T Consensus 139 -vlIDD~~~n~~~~~~~g~~ 157 (191)
T PF06941_consen 139 -VLIDDRPHNLEQFANAGIP 157 (191)
T ss_dssp -EEEESSSHHHSS-SSESSE
T ss_pred -EEecCChHHHHhccCCCce
Confidence 8999999988655566633
No 99
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=82.81 E-value=4 Score=32.61 Aligned_cols=54 Identities=20% Similarity=0.145 Sum_probs=38.1
Q ss_pred EEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCC
Q 022210 145 LVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ 208 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~ 208 (301)
+++|+|++++. +.. .=||+.+||+++.+. ..+++.|.+...-.+.+.+.|..-|
T Consensus 1 ~l~D~dGvl~~----g~~------~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~G 55 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNE------PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLG 55 (101)
T ss_dssp EEEESTTTSEE----TTE------E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTT
T ss_pred CEEeCccEeEe----CCC------cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcC
Confidence 57999999863 222 359999999999975 9999999998665555555553333
No 100
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=82.42 E-value=3.8 Score=37.46 Aligned_cols=41 Identities=12% Similarity=0.281 Sum_probs=36.9
Q ss_pred EEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCC
Q 022210 167 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
+++|||..+|.+++.++ --++|-|+|+..|..+++..|--+
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgk 113 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGK 113 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccc
Confidence 77899999999999864 899999999999999999988543
No 101
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=81.81 E-value=1.7 Score=37.75 Aligned_cols=104 Identities=22% Similarity=0.188 Sum_probs=54.2
Q ss_pred cEEEEecCCceeeeeecCe---eeeEEEEeCchHHHHHHHHHh-CceEEEEcCCch--------------HHHHHHHHHH
Q 022210 143 ITLVLDLDDFSFPIHSKME---VQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS--------------IYAGQLLDIL 204 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~---~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~--------------~YA~~vld~L 204 (301)
+.+.+|||+|++....... ...=+..+-|++.+-|.++.+ -|.|||+|.... ...+.+++.|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l 80 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKEL 80 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHc
Confidence 4678999999986543111 011135567899999999986 699999997521 2333444444
Q ss_pred CCCCceeeeEEe---cCcccee-CCcc---cccccc-cCCCCCcEEEEECCchh
Q 022210 205 DPNQTLIGQRVY---RDSCVFA-DGEY---LKDLTI-LGRDLARIAIVDNTPQV 250 (301)
Q Consensus 205 Dp~~~~f~~rly---Re~C~~~-~g~~---iKDLs~-Lgrdls~vIIVDdsp~~ 250 (301)
+..+ ..++ .+.|..- .|.+ .+++.. +.-|+++.++|=|...-
T Consensus 81 ---~ip~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 81 ---GIPI-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ---TS-E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ---CCce-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence 3222 2222 2223321 2222 333332 23588999999987543
No 102
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=81.65 E-value=1.7 Score=39.48 Aligned_cols=76 Identities=13% Similarity=0.096 Sum_probs=52.6
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---CcccccccccCCCCCcEEE
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g~~iKDLs~Lgrdls~vII 243 (301)
+..-||+.++|+.|.+.|-++|-|++... ++...- ..+|...+..+.-.... ..|.+=+..+|-+.+++++
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl-~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGL-GDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCc-HHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44569999999999988999999998765 233322 23566666544332221 1345556778999999999
Q ss_pred EECCc
Q 022210 244 VDNTP 248 (301)
Q Consensus 244 VDdsp 248 (301)
|.|++
T Consensus 186 VGD~~ 190 (238)
T PRK10748 186 VGDDL 190 (238)
T ss_pred EcCCc
Confidence 98885
No 103
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=80.99 E-value=5.9 Score=36.10 Aligned_cols=59 Identities=20% Similarity=0.136 Sum_probs=49.4
Q ss_pred CCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCCCC
Q 022210 141 LPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQ 208 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp~~ 208 (301)
..+.+++|||+|++.-. +. .+|...+.|+++. +-..++|-|...-..+.++++.|...+
T Consensus 2 ~~kli~~DlDGTLl~~~-----~~----i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 2 MIKLLAFDLDGTLLDSN-----KT----ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CeeEEEEcCCCCccCCC-----Cc----cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 35789999999997422 11 6999999999885 679999999999999999999998775
No 104
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=78.94 E-value=7.3 Score=35.99 Aligned_cols=57 Identities=16% Similarity=0.057 Sum_probs=45.6
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCC
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
.+.+++|||+|++.- .. ...|...+.|+.+.+. ..++|-|......+..+++.++-.
T Consensus 4 ~kli~~DlDGTLl~~----~~-----~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 4 KLLVFTDLDGTLLDH----HT-----YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred ceEEEEcCcccCcCC----CC-----cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 568999999999731 11 1457889999999875 899999999889999999988643
No 105
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=77.53 E-value=1.3 Score=41.99 Aligned_cols=66 Identities=20% Similarity=0.184 Sum_probs=39.9
Q ss_pred CCCCcEEEEecCCceeeee------------ecCeeeeEE-----EEeCchHHHHHHHHHhCceEEEEcCCch-HH-HHH
Q 022210 139 AGLPITLVLDLDDFSFPIH------------SKMEVQTVF-----VRQRPYLHMFLEAVASMFDVVIFTAGQS-IY-AGQ 199 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~------------~~~~~~~~~-----V~~RP~l~eFL~~ls~~fEIvIfTas~~-~Y-A~~ 199 (301)
..+++.+|+|||+|.+.-. |+..+...+ -+.=||+.+||+++-++--.|.|-|-.. .. .+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~ 155 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG 155 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence 3456699999998876421 111111122 3445999999999998866666655433 33 344
Q ss_pred HHHHH
Q 022210 200 LLDIL 204 (301)
Q Consensus 200 vld~L 204 (301)
-++-|
T Consensus 156 T~~nL 160 (274)
T COG2503 156 TIENL 160 (274)
T ss_pred hHHHH
Confidence 44444
No 106
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=76.82 E-value=9.4 Score=33.53 Aligned_cols=113 Identities=13% Similarity=0.057 Sum_probs=68.0
Q ss_pred CCcEEEEecCCcee----eeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEe
Q 022210 141 LPITLVLDLDDFSF----PIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY 216 (301)
Q Consensus 141 ~K~tLVLDLDd~l~----~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rly 216 (301)
.-+.+|+|.|+++- .+.-.|.... .+..|=+.--.+-+ .+.+.+.|-|+....++..+++.+.-. .+|...
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~-~~~~~D~~~~~~L~-~~Gi~laIiT~k~~~~~~~~l~~lgi~-~~f~~~-- 80 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESR-NFDIKDGMGVIVLQ-LCGIDVAIITSKKSGAVRHRAEELKIK-RFHEGI-- 80 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEE-EEecchHHHHHHHH-HCCCEEEEEECCCcHHHHHHHHHCCCc-EEEecC--
Confidence 35789999997542 2222343332 33455554322211 356999999999999999999999654 344321
Q ss_pred cCccceeCCcccccccccCCCCCcEEEEECCchhcccCCCceeecc
Q 022210 217 RDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE 262 (301)
Q Consensus 217 Re~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~I~I~ 262 (301)
......+.+=+..+|-+.++++.|.|++.-...-...|+.+.
T Consensus 81 ----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a 122 (169)
T TIGR02726 81 ----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA 122 (169)
T ss_pred ----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 000112333345568888999999999876543333344333
No 107
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=76.56 E-value=9.1 Score=33.79 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=46.0
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCC
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ 208 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~ 208 (301)
+.+++|||+|++.- .. ..-|...+-|+++.+. ..++|-|......+.++++.|...+
T Consensus 2 k~v~~DlDGTLl~~---~~------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 2 KLVAIDIDGTLTEP---NR------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred cEEEEecCCCcCCC---Cc------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 47899999999841 11 2578888999999865 8999999999999999999997764
No 108
>PLN02954 phosphoserine phosphatase
Probab=76.08 E-value=8.1 Score=34.09 Aligned_cols=84 Identities=13% Similarity=0.229 Sum_probs=55.3
Q ss_pred EeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCC-ceeeeEEe-cCc------------ccee-CCcccccc
Q 022210 168 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVY-RDS------------CVFA-DGEYLKDL 231 (301)
Q Consensus 168 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~-~~f~~rly-Re~------------C~~~-~g~~iKDL 231 (301)
..+||+.++|+.+.+ .+.++|-|++.+.+++.+++.+.-.. .+|...+. .++ |... ....++.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 478999999999975 58999999999999999999986542 35544332 111 1000 00111111
Q ss_pred -cccCCCCCcEEEEECCchhccc
Q 022210 232 -TILGRDLARIAIVDNTPQVFQL 253 (301)
Q Consensus 232 -s~Lgrdls~vIIVDdsp~~~~~ 253 (301)
..+| .+++|+|-|++.-...
T Consensus 164 ~~~~~--~~~~i~iGDs~~Di~a 184 (224)
T PLN02954 164 KKKHG--YKTMVMIGDGATDLEA 184 (224)
T ss_pred HHHcC--CCceEEEeCCHHHHHh
Confidence 1223 4689999999987765
No 109
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=74.21 E-value=10 Score=34.42 Aligned_cols=95 Identities=17% Similarity=0.279 Sum_probs=66.8
Q ss_pred EEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeC---C---------cccccc-c
Q 022210 167 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---G---------EYLKDL-T 232 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~---g---------~~iKDL-s 232 (301)
...+||+.+.++.+.+. +.|+|.|+|...++++|.+.+.-+. .+..++-.++-.+.. | .-++.+ +
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 78899999999999965 9999999999999999999997764 455555544421111 1 112222 3
Q ss_pred ccCCCCCcEEEEECCchhccc--CCCceeecc
Q 022210 233 ILGRDLARIAIVDNTPQVFQL--QVDNGIPIE 262 (301)
Q Consensus 233 ~Lgrdls~vIIVDdsp~~~~~--qp~N~I~I~ 262 (301)
.+|.++++++-+-|+..-..+ .-+++|.+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n 186 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVN 186 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC
Confidence 348889999999998765433 345555543
No 110
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=74.15 E-value=11 Score=32.59 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=38.6
Q ss_pred EEEecCCceeeeeecCeeeeE--EEEeCchHHHHHHHHHh-CceEEEEcCCchHHHH---HHHHHH
Q 022210 145 LVLDLDDFSFPIHSKMEVQTV--FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAG---QLLDIL 204 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~--~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~---~vld~L 204 (301)
+++|+|+|+.....-+...++ -=...|++.++++++.+ -|.+++-|+.....+. +.+..+
T Consensus 2 VisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 689999998754311100000 00348999999999996 4777777777766554 566554
No 111
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=70.13 E-value=8.5 Score=35.89 Aligned_cols=61 Identities=13% Similarity=0.052 Sum_probs=43.3
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh--CceEEEEcCCchHHHHHHHHHH
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDIL 204 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~vld~L 204 (301)
.++..+++|+|+|+++..-+... ...-|.+.+-|+.|.+ ...++|-|.-...-+..++..+
T Consensus 12 ~~~~li~~D~DGTLl~~~~~p~~----~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 12 SANYAWFFDLDGTLAEIKPHPDQ----VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CCCEEEEEecCCCCCCCCCCccc----ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 34789999999999864321111 1235888899999986 4778888888887777776544
No 112
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=69.58 E-value=9.5 Score=33.16 Aligned_cols=53 Identities=21% Similarity=0.091 Sum_probs=42.7
Q ss_pred EEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCC
Q 022210 145 LVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp 206 (301)
+++|||+|++.- +.. .-|...+.|+.+. +-..++|-|.-....+.+++..+.-
T Consensus 1 i~~DlDGTLl~~---~~~------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~ 54 (254)
T PF08282_consen 1 IFSDLDGTLLNS---DGK------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGI 54 (254)
T ss_dssp EEEECCTTTCST---TSS------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTH
T ss_pred cEEEECCceecC---CCe------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccc
Confidence 689999999752 111 4688999999988 6799999999999999999997743
No 113
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=69.45 E-value=12 Score=34.88 Aligned_cols=79 Identities=11% Similarity=0.005 Sum_probs=51.5
Q ss_pred CCCcEEEEecCCceeeee-------ecCeee----------eEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHH
Q 022210 140 GLPITLVLDLDDFSFPIH-------SKMEVQ----------TVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLL 201 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~-------~~~~~~----------~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vl 201 (301)
.+|..+|||+|+|++.-. +.+... .--...-|++.+|++++.+ -++|++-|.-.+...+..+
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 478999999999876421 111000 0112356899999999874 6999999998887766666
Q ss_pred HHHCCCCce-eeeEEecC
Q 022210 202 DILDPNQTL-IGQRVYRD 218 (301)
Q Consensus 202 d~LDp~~~~-f~~rlyRe 218 (301)
+.|...|-. +.+.+.|.
T Consensus 155 ~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 155 DNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHcCCCCcCeeeecC
Confidence 666555521 24455554
No 114
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=69.42 E-value=4.4 Score=35.62 Aligned_cols=30 Identities=23% Similarity=0.430 Sum_probs=25.4
Q ss_pred EEeCchHHHHHHHHHhCceEEEEcCCchHH
Q 022210 167 VRQRPYLHMFLEAVASMFDVVIFTAGQSIY 196 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~~fEIvIfTas~~~Y 196 (301)
...-||.++-++.|-++|+|+|-||++..|
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp 96 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHP 96 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCc
Confidence 345689999999999999999999996543
No 115
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=68.74 E-value=8.3 Score=33.11 Aligned_cols=80 Identities=16% Similarity=0.118 Sum_probs=55.8
Q ss_pred EEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCcc-ceeCCcccccccccCCCCCcEEE
Q 022210 166 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSC-VFADGEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C-~~~~g~~iKDLs~Lgrdls~vII 243 (301)
.-..||++.++|+.|.+. +.++|.|......|..+.+.+.-.. ..++-+.+ ...+-.+.+=+..++.+.+.|++
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 445799999999999986 8999999999999999999996532 22222211 11111123333446777779999
Q ss_pred EECCch
Q 022210 244 VDNTPQ 249 (301)
Q Consensus 244 VDdsp~ 249 (301)
|-|...
T Consensus 201 vGDg~n 206 (215)
T PF00702_consen 201 VGDGVN 206 (215)
T ss_dssp EESSGG
T ss_pred EccCHH
Confidence 998763
No 116
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=65.89 E-value=13 Score=32.27 Aligned_cols=54 Identities=24% Similarity=0.198 Sum_probs=42.9
Q ss_pred EEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHC
Q 022210 144 TLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD 205 (301)
Q Consensus 144 tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LD 205 (301)
.+++|+|+|+++- + .. ...|.+.+.|+++.+. ..++|-|.....++..++..++
T Consensus 1 li~~D~DgTL~~~---~-~~----~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDP---N-AH----ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCC---C-CC----cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 3789999999741 1 11 2578999999999976 8999999999999999998753
No 117
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=65.63 E-value=23 Score=32.60 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=44.9
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCC
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
+.++.+++|||+|++.- . + . .-|-..+-|+++.+ -..++|-|.-....+.++++.+...
T Consensus 5 ~~~~lI~~DlDGTLL~~---~--~--~--i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDS---H--T--Y--DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCCeEEEEeCccCCcCC---C--C--c--CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 56789999999999742 1 1 1 23556777888875 4899999999888888999998653
No 118
>PRK11590 hypothetical protein; Provisional
Probab=64.45 E-value=10 Score=33.77 Aligned_cols=39 Identities=21% Similarity=0.061 Sum_probs=34.4
Q ss_pred EEeCchHHHHH-HHHH-hCceEEEEcCCchHHHHHHHHHHC
Q 022210 167 VRQRPYLHMFL-EAVA-SMFDVVIFTAGQSIYAGQLLDILD 205 (301)
Q Consensus 167 V~~RP~l~eFL-~~ls-~~fEIvIfTas~~~YA~~vld~LD 205 (301)
+..+||+.+.| +.+. +.+.++|-|++...|+++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45699999999 5677 589999999999999999999876
No 119
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=64.00 E-value=27 Score=30.75 Aligned_cols=58 Identities=10% Similarity=0.090 Sum_probs=44.3
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCC
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ 208 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~ 208 (301)
.+.+++|||+|++.- .. ...|...+-|+++.+. ..++|-|.-....+.+++..+...+
T Consensus 3 ~kli~~DlDGTLl~~---~~------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 3 IKAIAIDIDGTITDK---DR------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred eeEEEEecCCCcCCC---CC------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 368899999999832 11 2578888889998854 7888888888888888888886653
No 120
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=63.08 E-value=22 Score=32.18 Aligned_cols=52 Identities=17% Similarity=0.167 Sum_probs=41.0
Q ss_pred EEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCC
Q 022210 145 LVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp 206 (301)
+++|||+|++. . .. .-|...++|+++.+. ..+++-|..+...+..+++.+.-
T Consensus 2 i~~DlDGTLl~-~--~~-------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 2 IFTDLDGTLLP-P--GY-------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred EEEeCCCCCcC-C--CC-------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 68899999985 1 11 246789999999865 89999998888888888888864
No 121
>PLN02151 trehalose-phosphatase
Probab=62.53 E-value=12 Score=36.96 Aligned_cols=59 Identities=17% Similarity=0.163 Sum_probs=47.2
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHH
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLD 202 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld 202 (301)
.++..|+||+|+|+.++.-+ .--+..-|.+.+-|+.|++.+.++|-|.-...-++.++.
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~----P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDD----PDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CCceEEEEecCccCCCCCCC----cccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 46789999999999987532 123446799999999999999999999888877777764
No 122
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=61.92 E-value=9.3 Score=39.57 Aligned_cols=122 Identities=14% Similarity=0.114 Sum_probs=63.1
Q ss_pred CCCCcEEEEecCCceeeeeecCeeeeEEEEeC-----chHHHHHHHHHhC----ceEEEEcCCchHHHHHHHHHHCCCCc
Q 022210 139 AGLPITLVLDLDDFSFPIHSKMEVQTVFVRQR-----PYLHMFLEAVASM----FDVVIFTAGQSIYAGQLLDILDPNQT 209 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~R-----P~l~eFL~~ls~~----fEIvIfTas~~~YA~~vld~LDp~~~ 209 (301)
...|++||||||.|+..-.+. ..+--.+.+- |-..+|=+++... +=+.|-|-....-|+.+... +.
T Consensus 219 g~~kK~LVLDLDNTLWGGVIG-edGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~k---hp- 293 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIG-EDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRK---HP- 293 (574)
T ss_pred CcccceEEEecCCcccccccc-cccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhh---CC-
Confidence 467999999999988532111 0111122222 3334555554433 34445555555555554432 11
Q ss_pred eeeeEEecCcccee------CC-cccccccccCCCCCcEEEEECCchhcccCCCce-eeccCccCC
Q 022210 210 LIGQRVYRDSCVFA------DG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNG-IPIESWFGD 267 (301)
Q Consensus 210 ~f~~rlyRe~C~~~------~g-~~iKDLs~Lgrdls~vIIVDdsp~~~~~qp~N~-I~I~~f~gd 267 (301)
...|--++-... .+ +..|=-++||-.+...|+|||+|...-.-..++ |.+.+|-.|
T Consensus 294 --~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~D 357 (574)
T COG3882 294 --DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPED 357 (574)
T ss_pred --CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCC
Confidence 122322322111 11 333455577889999999999998664322222 555555444
No 123
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=61.79 E-value=26 Score=36.35 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=66.9
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecC
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD 218 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe 218 (301)
.++..++++.|+..+.+. .+.-..||++.++++++.+ .+.++|-|+..+.+|+.+++.+.-+ ++.
T Consensus 383 ~g~~~~~~~~~~~~~g~~------~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~------ 448 (562)
T TIGR01511 383 QGSTSVLVAVNGELAGVF------ALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRA------ 448 (562)
T ss_pred CCCEEEEEEECCEEEEEE------EecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEc------
Confidence 344556667776544321 2234579999999999986 5999999999999999999998553 221
Q ss_pred ccce-eCCcccccccccCCCCCcEEEEECCchhccc--CCCceeec
Q 022210 219 SCVF-ADGEYLKDLTILGRDLARIAIVDNTPQVFQL--QVDNGIPI 261 (301)
Q Consensus 219 ~C~~-~~g~~iKDLs~Lgrdls~vIIVDdsp~~~~~--qp~N~I~I 261 (301)
.+.. .....+|.+ ....+++++|-|...-... +-+-||..
T Consensus 449 ~~~p~~K~~~v~~l---~~~~~~v~~VGDg~nD~~al~~A~vgia~ 491 (562)
T TIGR01511 449 EVLPDDKAALIKEL---QEKGRVVAMVGDGINDAPALAQADVGIAI 491 (562)
T ss_pred cCChHHHHHHHHHH---HHcCCEEEEEeCCCccHHHHhhCCEEEEe
Confidence 1111 111233333 3355789999998765433 33444443
No 124
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=61.56 E-value=12 Score=36.82 Aligned_cols=42 Identities=19% Similarity=0.317 Sum_probs=38.3
Q ss_pred eEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHH-C
Q 022210 164 TVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL-D 205 (301)
Q Consensus 164 ~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~L-D 205 (301)
.-||.+=|++.++|+++.+ -..+.|-|++...|++.+++.+ +
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 4588899999999999986 4899999999999999999997 5
No 125
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=61.45 E-value=34 Score=30.89 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=42.1
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCC
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
.+.+++|||+|++.-. . ..-|...+-|+++.+. ..++|=|.-....+.++++.+...
T Consensus 3 ~kli~~DlDGTLl~~~---~------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 3 YRVIALDLDGTLLTPK---K------TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccEEEEeCCCceECCC---C------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 4688999999998321 1 1466677888888754 788888887777788888888654
No 126
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=60.46 E-value=9.3 Score=35.34 Aligned_cols=98 Identities=14% Similarity=0.092 Sum_probs=70.5
Q ss_pred EEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCC-----cccccccccCCCC-
Q 022210 166 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG-----EYLKDLTILGRDL- 238 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g-----~~iKDLs~Lgrdl- 238 (301)
.++.=||+..++..|.. ---+.++|++.+.+++-.+..+.---..|++...-++=....| .|.+-.+++|-+.
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~ 169 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPP 169 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCc
Confidence 34567899999999985 5889999999999998888877522235666655222222232 5788889999888
Q ss_pred CcEEEEECCchhcccC---CCceeeccC
Q 022210 239 ARIAIVDNTPQVFQLQ---VDNGIPIES 263 (301)
Q Consensus 239 s~vIIVDdsp~~~~~q---p~N~I~I~~ 263 (301)
+++++.+|+|.....- --+.|.+..
T Consensus 170 ~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 170 SKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred cceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 9999999999865321 235666666
No 127
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=59.92 E-value=24 Score=31.16 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=41.2
Q ss_pred EEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCC
Q 022210 145 LVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp 206 (301)
+++|||+|++.-. . . .-|-..+.|+.+.+ ...++|-|......+.++++.+.-
T Consensus 2 i~~DlDGTLL~~~---~----~--~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~ 55 (221)
T TIGR02463 2 VFSDLDGTLLDSH---S----Y--DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGL 55 (221)
T ss_pred EEEeCCCCCcCCC---C----C--CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 6899999997321 1 1 12337789999886 489999999999999999999864
No 128
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=59.69 E-value=27 Score=31.78 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=44.0
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCC
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
.+.+++|||+|++.-. + ..-|...+-|+++.+. ..++|=|.-....+.++++.+...
T Consensus 3 ~kli~~DlDGTLl~~~-----~----~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 3 IKLIAIDMDGTLLLPD-----H----TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred eEEEEEecCCcCcCCC-----C----ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 4688999999998421 1 1467778889999865 888888888888888898888654
No 129
>PLN02645 phosphoglycolate phosphatase
Probab=59.32 E-value=18 Score=34.48 Aligned_cols=55 Identities=15% Similarity=0.066 Sum_probs=40.8
Q ss_pred CCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHC
Q 022210 141 LPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD 205 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LD 205 (301)
+-.++++|+|+|++. +. .+ =||..++|+++.+ -..+++-|+....-...+++.|.
T Consensus 27 ~~~~~~~D~DGtl~~----~~----~~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~ 82 (311)
T PLN02645 27 SVETFIFDCDGVIWK----GD----KL--IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE 82 (311)
T ss_pred hCCEEEEeCcCCeEe----CC----cc--CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH
Confidence 456889999999863 22 12 2999999999985 69999999988655555555553
No 130
>PRK10444 UMP phosphatase; Provisional
Probab=57.91 E-value=24 Score=32.61 Aligned_cols=54 Identities=17% Similarity=0.175 Sum_probs=42.2
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCC
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp 206 (301)
+++++|||+|++. +. ..=|+..+|++++.+ -..+++-|.....-+..+.+.|..
T Consensus 2 ~~v~~DlDGtL~~----~~------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 2 KNVICDIDGVLMH----DN------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred cEEEEeCCCceEe----CC------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 3688999999863 22 136999999999986 699999999888777777777643
No 131
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=57.73 E-value=32 Score=31.11 Aligned_cols=54 Identities=19% Similarity=0.149 Sum_probs=42.7
Q ss_pred EEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCC
Q 022210 145 LVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
+++|||+|++.- +. ...|...+.|+++.+. ..++|-|......+..+++.+...
T Consensus 2 i~~DlDGTLl~~---~~------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 2 IFIDLDGTLLND---DH------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred EEEeCCCCCCCC---CC------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 689999999742 11 1467888899999864 899999999988888888888654
No 132
>PLN03017 trehalose-phosphatase
Probab=55.67 E-value=18 Score=35.95 Aligned_cols=60 Identities=18% Similarity=0.174 Sum_probs=46.2
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHH
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI 203 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~ 203 (301)
.++..|+||+|+|++++.-+.. -...=|.+.+-|++|.+.+.++|-|.-...-+..++..
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~----~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l 168 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPD----KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKL 168 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcc----cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcc
Confidence 4678899999999997653111 12356889999999999999999999888888777543
No 133
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=55.52 E-value=18 Score=32.54 Aligned_cols=37 Identities=14% Similarity=0.011 Sum_probs=33.0
Q ss_pred EeCchHHHHHH-HHH-hCceEEEEcCCchHHHHHHHHHH
Q 022210 168 RQRPYLHMFLE-AVA-SMFDVVIFTAGQSIYAGQLLDIL 204 (301)
Q Consensus 168 ~~RP~l~eFL~-~ls-~~fEIvIfTas~~~YA~~vld~L 204 (301)
..+|++.+.|+ ++. +-+.|+|-|++...|++++.+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 46999999995 777 58999999999999999999773
No 134
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=55.37 E-value=38 Score=30.95 Aligned_cols=57 Identities=11% Similarity=0.042 Sum_probs=41.8
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCCC
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ 208 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~~ 208 (301)
+.+++|||+|++.- +. ..-|...+-|+++.+. ..++|=|.-....+.++++.++..+
T Consensus 3 kli~~DlDGTLl~~--~~-------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 3 RLAAFDMDGTLLMP--DH-------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred cEEEEeCCCcCcCC--CC-------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 57899999999842 11 1467777888888765 7777777777778888888876543
No 135
>PLN02580 trehalose-phosphatase
Probab=55.23 E-value=22 Score=35.63 Aligned_cols=61 Identities=21% Similarity=0.210 Sum_probs=49.5
Q ss_pred CCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHH
Q 022210 139 AGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI 203 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~ 203 (301)
..++..|+||.|+|+.++.-+ +--+..=|.+.+-|+.|++.+-|+|-|.-...-++.++..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~----Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDD----PDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCC----cccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 356789999999999877532 2234567899999999999999999999998888887764
No 136
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=54.75 E-value=23 Score=33.05 Aligned_cols=86 Identities=13% Similarity=0.122 Sum_probs=59.0
Q ss_pred EEEeCchHHHHHHHHH-hCceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCcc---------------ceeCC----
Q 022210 166 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSC---------------VFADG---- 225 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C---------------~~~~g---- 225 (301)
+...=|.+-++++.+. +..-|+..|+....|...-++.|-..|--|+...+++.- .+.+|
T Consensus 79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 3445678888999998 469999999999999999999985444333333211111 11122
Q ss_pred -------cccccccccCCCCCcEEEEECCchhc
Q 022210 226 -------EYLKDLTILGRDLARIAIVDNTPQVF 251 (301)
Q Consensus 226 -------~~iKDLs~Lgrdls~vIIVDdsp~~~ 251 (301)
....=|..+|+.+++||+|||+.+..
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl 191 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENL 191 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHH
Confidence 11234566799999999999998754
No 137
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=54.12 E-value=15 Score=31.09 Aligned_cols=79 Identities=16% Similarity=0.252 Sum_probs=50.0
Q ss_pred chHHHHHHHH-HhCceEEEEcCCchHHHHHHHHHHCCCC-ceeeeEEecCcccee-----------CCcccccc---ccc
Q 022210 171 PYLHMFLEAV-ASMFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVYRDSCVFA-----------DGEYLKDL---TIL 234 (301)
Q Consensus 171 P~l~eFL~~l-s~~fEIvIfTas~~~YA~~vld~LDp~~-~~f~~rlyRe~C~~~-----------~g~~iKDL---s~L 234 (301)
|++.+|++.+ .+.++++|-|++...+++++++.+.-.. .++..+++-+.-... ....++.+ ..-
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 4444999998 4789999999999999999999886543 245555521110000 11223333 100
Q ss_pred CCCCCcEEEEECCch
Q 022210 235 GRDLARIAIVDNTPQ 249 (301)
Q Consensus 235 grdls~vIIVDdsp~ 249 (301)
+.+..+++.|=|+..
T Consensus 172 ~~~~~~~~~iGDs~~ 186 (192)
T PF12710_consen 172 DIDPDRVIAIGDSIN 186 (192)
T ss_dssp THTCCEEEEEESSGG
T ss_pred CCCCCeEEEEECCHH
Confidence 566778888888764
No 138
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=52.75 E-value=39 Score=30.74 Aligned_cols=53 Identities=19% Similarity=0.166 Sum_probs=40.8
Q ss_pred EEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCC
Q 022210 145 LVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp 206 (301)
+++|||+|++.-. . . ..|...++++.+.+. ..+++-|.-....+..+++.+..
T Consensus 2 i~~DlDGTll~~~---~----~--~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~ 55 (256)
T TIGR01486 2 IFTDLDGTLLDPH---G----Y--DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGL 55 (256)
T ss_pred EEEcCCCCCcCCC---C----c--CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 6899999997321 1 1 234588999999875 88888898888888899988864
No 139
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=51.91 E-value=12 Score=34.10 Aligned_cols=48 Identities=15% Similarity=0.059 Sum_probs=33.7
Q ss_pred CCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEE--EEcCC
Q 022210 141 LPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV--IFTAG 192 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIv--IfTas 192 (301)
++..|+||+|+|+.+..-+.. .+..=|++.+.|+.|++...++ |-|.-
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~----~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPD----AAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCCc----ccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 578899999999987532111 2345689999999999876544 44443
No 140
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=51.71 E-value=25 Score=33.60 Aligned_cols=52 Identities=15% Similarity=0.186 Sum_probs=39.2
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-----CceEEEEcCCc----hHHHHHHHHHH
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-----MFDVVIFTAGQ----SIYAGQLLDIL 204 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-----~fEIvIfTas~----~~YA~~vld~L 204 (301)
+.+++|+|++++. +.. .=|+..++++.+.. ...++++|... +.+++.+.+.+
T Consensus 1 ~~~ifD~DGvL~~----g~~------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l 61 (321)
T TIGR01456 1 FGFAFDIDGVLFR----GKK------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL 61 (321)
T ss_pred CEEEEeCcCceEC----Ccc------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc
Confidence 3689999999863 221 36999999999997 78889999764 56677765555
No 141
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=49.58 E-value=36 Score=31.70 Aligned_cols=41 Identities=20% Similarity=0.360 Sum_probs=36.0
Q ss_pred EEeCchHHHHHHHHHh---CceEEEEcCCchHHHHHHHHHHCCC
Q 022210 167 VRQRPYLHMFLEAVAS---MFDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~---~fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
+..-||+.+|++.+++ .+|++|-|-|..-|.+.++++-.-.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 4568999999999953 7999999999999999999987654
No 142
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=49.42 E-value=38 Score=31.28 Aligned_cols=56 Identities=14% Similarity=0.137 Sum_probs=36.7
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHH
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL 204 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~L 204 (301)
+++++|+|+|++.- ..... ..=|+..++++++.+. ..+++-|.....-.+.+.+.|
T Consensus 2 k~i~~D~DGtl~~~----~~~~~--~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l 58 (257)
T TIGR01458 2 KGVLLDISGVLYIS----DAKSG--VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL 58 (257)
T ss_pred CEEEEeCCCeEEeC----CCccc--CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 47899999998632 11000 0368999999999964 889999975554333333333
No 143
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=48.40 E-value=41 Score=31.24 Aligned_cols=41 Identities=17% Similarity=0.133 Sum_probs=31.7
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCc
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ 193 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~ 193 (301)
..+++|+|+|++. +.. .=|+..++|+++.+ ...+++-|+..
T Consensus 3 ~~~~~D~DGtl~~----~~~------~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWL----GER------VVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEc----CCe------eCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 4788899999853 221 35889999999986 57889999854
No 144
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=48.28 E-value=84 Score=34.00 Aligned_cols=60 Identities=12% Similarity=-0.010 Sum_probs=44.1
Q ss_pred CCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCC
Q 022210 139 AGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
...++.++.|||+|++.-. . ++. +...+-|+.+.+ -..+++-|.-....+..+++.|+..
T Consensus 413 ~~~~KLIfsDLDGTLLd~d----~---~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPL----T---YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CceeeEEEEECcCCCcCCC----C---ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3678899999999997421 1 222 234667777775 4889999999989899999888643
No 145
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=44.95 E-value=50 Score=28.81 Aligned_cols=65 Identities=26% Similarity=0.246 Sum_probs=33.6
Q ss_pred CchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCCcccccccccCCCCCcEEEEECCc
Q 022210 170 RPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 248 (301)
Q Consensus 170 RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vIIVDdsp 248 (301)
|-.+.+||+.+.. .-.|++|-|+.+-- .+++.++..++++ ..+||++|
T Consensus 54 ~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I-----------------------------~~vvD~np 102 (160)
T PF08484_consen 54 KAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLI-----------------------------DYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS-------------------------------EEES-G
T ss_pred HHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCccee-----------------------------EEEEeCCh
Confidence 4456677777764 45588888877643 4566665544322 23778888
Q ss_pred hhccc-CCCceeeccCcc
Q 022210 249 QVFQL-QVDNGIPIESWF 265 (301)
Q Consensus 249 ~~~~~-qp~N~I~I~~f~ 265 (301)
.+.+. -|..+|||.+..
T Consensus 103 ~K~G~~~PGt~ipI~~p~ 120 (160)
T PF08484_consen 103 LKQGKYLPGTHIPIVSPE 120 (160)
T ss_dssp GGTTEE-TTT--EEEEGG
T ss_pred hhcCcccCCCCCeECCHH
Confidence 87754 477788887754
No 146
>PRK10976 putative hydrolase; Provisional
Probab=44.65 E-value=68 Score=29.09 Aligned_cols=56 Identities=21% Similarity=0.253 Sum_probs=40.5
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCCC
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
+.+++|||+|++.-. . ..-|...+-|+++.+ -..++|=|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~--~-------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 3 QVVASDLDGTLLSPD--H-------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred eEEEEeCCCCCcCCC--C-------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 578999999998421 1 145667777888875 4777777777777777788877654
No 147
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=43.91 E-value=69 Score=27.98 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=39.8
Q ss_pred EEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCC
Q 022210 145 LVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp 206 (301)
+++|||+|++.-. . ...|-..+-|+++.+. ..+++-|.-....+.+++..+..
T Consensus 1 i~~DlDGTLl~~~---~------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPN---R------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCC---c------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 4799999997421 1 1456677788888765 78888888888888888888863
No 148
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=42.52 E-value=44 Score=31.82 Aligned_cols=60 Identities=20% Similarity=0.088 Sum_probs=46.5
Q ss_pred CCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCce--EEEEcCCchHHHHHHHH
Q 022210 139 AGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFD--VVIFTAGQSIYAGQLLD 202 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fE--IvIfTas~~~YA~~vld 202 (301)
..+|.+++||.|+|+.++..+ ..=+..=+++.+-|+.|+..+. ++|.|.-...-.+..+.
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~----p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPH----PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred cccceEEEEeccccccccccC----ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 467899999999998765432 2223456889999999999988 88888888787777776
No 149
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=39.88 E-value=65 Score=30.66 Aligned_cols=54 Identities=15% Similarity=0.102 Sum_probs=39.9
Q ss_pred CCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHH
Q 022210 141 LPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL 204 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~L 204 (301)
...+..+|||++++ .+.. .=||..+||+++.+. =-+++-|.+..+-.+.+..+|
T Consensus 7 ~y~~~l~DlDGvl~----~G~~------~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 7 KYDGFLFDLDGVLY----RGNE------AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred hcCEEEEcCcCceE----eCCc------cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34678899999986 3332 359999999999976 888888888765555444444
No 150
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=39.39 E-value=59 Score=29.44 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=36.1
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCc-hHHHHHHHHHHC
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQ-SIYAGQLLDILD 205 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~-~~YA~~vld~LD 205 (301)
++.++.|||+|++.-+ ++. . ...|.+.+-++.+.+.--.+|+.+|. ..=+.++++.+.
T Consensus 1 ~~li~tDlDGTLl~~~-~~~-~----~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~ 59 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHT-DGD-N----QALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKP 59 (249)
T ss_pred CeEEEEcCCCcCcCCC-CCC-h----HHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCC
Confidence 3678889999998532 111 1 14588888888888776455555544 444555655454
No 151
>PLN02423 phosphomannomutase
Probab=38.55 E-value=85 Score=28.76 Aligned_cols=55 Identities=11% Similarity=0.189 Sum_probs=35.6
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCC
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp 206 (301)
+.|..+++|||+|++.- + + ..-|...+-++++.+...+++-|.. .| ..+.+.+.+
T Consensus 5 ~~~~i~~~D~DGTLl~~--~---~----~i~~~~~~ai~~l~~~i~fviaTGR--~~-~~~~~~~~~ 59 (245)
T PLN02423 5 KPGVIALFDVDGTLTAP--R---K----EATPEMLEFMKELRKVVTVGVVGGS--DL-SKISEQLGK 59 (245)
T ss_pred ccceEEEEeccCCCcCC--C---C----cCCHHHHHHHHHHHhCCEEEEECCc--CH-HHHHHHhcc
Confidence 34566679999999732 1 1 1467888999999988666666654 22 245555544
No 152
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=37.86 E-value=40 Score=31.82 Aligned_cols=100 Identities=15% Similarity=0.233 Sum_probs=57.1
Q ss_pred EEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHC---CCCceeeeEEec-Ccccee--CC----ccccccccc
Q 022210 166 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD---PNQTLIGQRVYR-DSCVFA--DG----EYLKDLTIL 234 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LD---p~~~~f~~rlyR-e~C~~~--~g----~~iKDLs~L 234 (301)
-+.+|.|+.+|++.|.++ -=+.|||||-..-.+.+++.-. |+=++++..+.= ++.... .| .+-|+-+.+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 577999999999999975 7899999999999999998862 222344444432 222221 11 233443333
Q ss_pred --------CCCCCcEEEEECCchhccc-----CCCceeeccCcc
Q 022210 235 --------GRDLARIAIVDNTPQVFQL-----QVDNGIPIESWF 265 (301)
Q Consensus 235 --------grdls~vIIVDdsp~~~~~-----qp~N~I~I~~f~ 265 (301)
-...+|||++-|+..-..+ ..+|.|.|.=..
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn 211 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLN 211 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecc
Confidence 1456899999999876533 346666664433
No 153
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=37.59 E-value=86 Score=30.54 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=40.9
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHHHHHHHHHCCC
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN 207 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~vld~LDp~ 207 (301)
+.+++|||+|++.-+ . |+ -+-..+-|+++.+. ..||+-|+-+..=+..+.+.|.-.
T Consensus 2 KLIftDLDGTLLd~~----~---~~--~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLE----F---NS--YGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCC----C---cC--CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 578899999997421 1 22 34477888898854 888888888777777788888654
No 154
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=37.38 E-value=1.1e+02 Score=31.57 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=54.0
Q ss_pred EEeCchHHHHHHHHHh-C-ceEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccce-eCCcccccccccCCCCCcEEE
Q 022210 167 VRQRPYLHMFLEAVAS-M-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF-ADGEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~-~-fEIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~-~~g~~iKDLs~Lgrdls~vII 243 (301)
-..||++.+.|++|.+ . +.++|-|...+.+|..+++.+.-+. +|.. +.. .....++.+ +....++++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~------~~p~~K~~~v~~l---~~~~~~v~~ 452 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAE------LLPEDKLAIVKEL---QEEGGVVAM 452 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eecc------CCHHHHHHHHHHH---HHcCCEEEE
Confidence 4589999999999975 5 8999999999999999999997642 3321 111 111233333 334569999
Q ss_pred EECCchhc
Q 022210 244 VDNTPQVF 251 (301)
Q Consensus 244 VDdsp~~~ 251 (301)
|-|...-.
T Consensus 453 vGDg~nD~ 460 (556)
T TIGR01525 453 VGDGINDA 460 (556)
T ss_pred EECChhHH
Confidence 99998754
No 155
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=37.10 E-value=35 Score=35.09 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=55.1
Q ss_pred EEEeCchHHHHHHHHHh-Cc-eEEEEcCCchHHHHHHHHHHCCCCceeeeEEecCccceeCCcccccccccCCCCCcEEE
Q 022210 166 FVRQRPYLHMFLEAVAS-MF-DVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAI 243 (301)
Q Consensus 166 ~V~~RP~l~eFL~~ls~-~f-EIvIfTas~~~YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~Lgrdls~vII 243 (301)
.-..||++.+.+++|.+ -+ .++|-|+..+.+|+.+++.+.-.. +|... .. + .-.+-+..++...+++++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~------~p-~-~K~~~i~~l~~~~~~v~~ 430 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAEL------LP-E-DKLEIVKELREKYGPVAM 430 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhcc------Cc-H-HHHHHHHHHHhcCCEEEE
Confidence 34589999999999986 48 999999999999999999996643 23211 11 1 112223334555689999
Q ss_pred EECCchhc
Q 022210 244 VDNTPQVF 251 (301)
Q Consensus 244 VDdsp~~~ 251 (301)
|-|...-.
T Consensus 431 vGDg~nD~ 438 (536)
T TIGR01512 431 VGDGINDA 438 (536)
T ss_pred EeCCHHHH
Confidence 99997754
No 156
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=34.82 E-value=92 Score=28.53 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=29.5
Q ss_pred cEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcC
Q 022210 143 ITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTA 191 (301)
Q Consensus 143 ~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTa 191 (301)
..+++|+|+|++. +.. .=|+..++|+++.+ ...+++-|.
T Consensus 2 ~~~~~D~DGtl~~----~~~------~i~~a~~~l~~l~~~g~~~~~~Tn 41 (249)
T TIGR01457 2 KGYLIDLDGTMYK----GKE------RIPEAETFVHELQKRDIPYLFVTN 41 (249)
T ss_pred CEEEEeCCCceEc----CCe------eCcCHHHHHHHHHHCCCeEEEEeC
Confidence 4789999999863 221 23789999999985 488888885
No 157
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=31.34 E-value=77 Score=28.77 Aligned_cols=50 Identities=22% Similarity=0.246 Sum_probs=36.3
Q ss_pred EEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCc----hHHHHHHHHHH
Q 022210 145 LVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ----SIYAGQLLDIL 204 (301)
Q Consensus 145 LVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~----~~YA~~vld~L 204 (301)
+++|+|++++.- .. .=|++.+++..+.+. +.+++-|.+. +.+++.+.+++
T Consensus 1 ~lfD~DGvL~~~----~~------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~ 55 (236)
T TIGR01460 1 FLFDIDGVLWLG----HK------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL 55 (236)
T ss_pred CEEeCcCccCcC----Cc------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 478999998632 11 236999999999864 9999998444 56777777643
No 158
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=30.71 E-value=78 Score=31.06 Aligned_cols=40 Identities=23% Similarity=0.421 Sum_probs=30.9
Q ss_pred EEEEeCc-hHHHHHHHHHh------CceEEEEcCCchHHHHHHHHHH
Q 022210 165 VFVRQRP-YLHMFLEAVAS------MFDVVIFTAGQSIYAGQLLDIL 204 (301)
Q Consensus 165 ~~V~~RP-~l~eFL~~ls~------~fEIvIfTas~~~YA~~vld~L 204 (301)
+.++.|| ++..-|+.+.+ .++|+|+--|...-+..++...
T Consensus 6 v~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~ 52 (334)
T cd02514 6 VIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF 52 (334)
T ss_pred EEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh
Confidence 4677899 79999999985 4999999888876555555444
No 159
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=30.46 E-value=63 Score=31.02 Aligned_cols=79 Identities=11% Similarity=0.050 Sum_probs=49.1
Q ss_pred CCcEEEEecCCceeee-------eecCeee-----e-EE-----EEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHH
Q 022210 141 LPITLVLDLDDFSFPI-------HSKMEVQ-----T-VF-----VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLL 201 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v-------~~~~~~~-----~-~~-----V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vl 201 (301)
++-.+|||+|||++.- .+.+... . -+ ..-=|+..+|++++.+ -+.|++.|.-.+..-+.=+
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 5789999999998721 0111110 0 01 1124789999999975 6999999998876666666
Q ss_pred HHHCCCCce-eeeEEecCc
Q 022210 202 DILDPNQTL-IGQRVYRDS 219 (301)
Q Consensus 202 d~LDp~~~~-f~~rlyRe~ 219 (301)
+-|-..|-. ..+.+.|..
T Consensus 180 ~NL~kaGy~~~~~LiLR~~ 198 (275)
T TIGR01680 180 ANLKKAGYHTWEKLILKDP 198 (275)
T ss_pred HHHHHcCCCCcceeeecCC
Confidence 666555521 234455643
No 160
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=28.74 E-value=85 Score=33.57 Aligned_cols=62 Identities=23% Similarity=0.196 Sum_probs=45.4
Q ss_pred CCCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh--CceEEEEcCCchHHHHHHHHHH
Q 022210 139 AGLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDIL 204 (301)
Q Consensus 139 ~~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~vld~L 204 (301)
..++..+++|+|+|+.+...... ....-|.+.+.|+.|.+ ...|+|-|.-.....++++..+
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~----~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~ 552 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE----LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL 552 (726)
T ss_pred hccceEEEEecCccccCCCCCcc----cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 35678999999999986432111 11245789999999997 6889999998888787776544
No 161
>PTZ00174 phosphomannomutase; Provisional
Probab=27.21 E-value=1.5e+02 Score=26.91 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=32.6
Q ss_pred CCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchHHH
Q 022210 141 LPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYA 197 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA 197 (301)
+.+.+++|||+|++.-. . ..-|...+-|+++.+. ..++|=|...-.-+
T Consensus 4 ~~klia~DlDGTLL~~~--~-------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i 52 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPR--N-------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKI 52 (247)
T ss_pred CCeEEEEECcCCCcCCC--C-------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 35788999999998321 1 1467788888888866 66666666544433
No 162
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=27.12 E-value=70 Score=29.42 Aligned_cols=55 Identities=22% Similarity=0.097 Sum_probs=32.0
Q ss_pred CCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHH-HHHhCceEEEEcCCchHHHHHHHHHH
Q 022210 141 LPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLE-AVASMFDVVIFTAGQSIYAGQLLDIL 204 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~-~ls~~fEIvIfTas~~~YA~~vld~L 204 (301)
|+..||-|||+|++ ++... -+.-+.++|+ ......-+++=|..+-.-+.+++...
T Consensus 1 ~~~ll~sDlD~Tl~----~~~~~-----~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~ 56 (247)
T PF05116_consen 1 PPRLLASDLDGTLI----DGDDE-----ALARLEELLEQQARPEILFVYVTGRSLESVLRLLREY 56 (247)
T ss_dssp -SEEEEEETBTTTB----HCHHH-----HHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHC
T ss_pred CCEEEEEECCCCCc----CCCHH-----HHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhC
Confidence 47889999999997 22111 2344555555 33344556666666667777777654
No 163
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=25.82 E-value=51 Score=31.12 Aligned_cols=39 Identities=15% Similarity=0.402 Sum_probs=34.0
Q ss_pred EEeCchHHHHHHHHHh--CceEEEEcCCchHHHHHHHHHHC
Q 022210 167 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILD 205 (301)
Q Consensus 167 V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~vld~LD 205 (301)
+-.-||+.+.++.+++ .||++|-|-+..-+.+.++++.+
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~ 123 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAG 123 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHcc
Confidence 3456999999999985 48999999999999999999984
No 164
>PHA03050 glutaredoxin; Provisional
Probab=25.62 E-value=90 Score=25.30 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=31.6
Q ss_pred HHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCC
Q 022210 174 HMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 208 (301)
Q Consensus 174 ~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~ 208 (301)
.+|++.+-+...|+|||.+.=.|+..+.+.|+..+
T Consensus 3 ~~~v~~~i~~~~V~vys~~~CPyC~~ak~~L~~~~ 37 (108)
T PHA03050 3 EEFVQQRLANNKVTIFVKFTCPFCRNALDILNKFS 37 (108)
T ss_pred HHHHHHHhccCCEEEEECCCChHHHHHHHHHHHcC
Confidence 57889998888999999999999999999998776
No 165
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=21.52 E-value=2.5e+02 Score=26.74 Aligned_cols=59 Identities=19% Similarity=0.197 Sum_probs=39.7
Q ss_pred CcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEEEEcCCchHHHHHHHHHHCCCCc
Q 022210 142 PITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 209 (301)
Q Consensus 142 K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~vld~LDp~~~ 209 (301)
...+.+|||.|+++-.++ .-|-.--.++-.-.-|+||.-||-+..=...+-+.|+-+|.
T Consensus 7 ~~lIFtDlD~TLl~~~ye---------~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~ 65 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYE---------WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGL 65 (274)
T ss_pred ceEEEEcccCcccCCCCC---------CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCC
Confidence 466778999999973322 12333333344446799999999887766677788887753
No 166
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=21.42 E-value=2.1e+02 Score=24.53 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=44.9
Q ss_pred eeecCeeeeEEEEeCchHHHHHHHHHhC-ceEEEEcCCchH-HHHHHHHHHCCCCceeeeEEecCccceeCCcccccccc
Q 022210 156 IHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSI-YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTI 233 (301)
Q Consensus 156 v~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~-YA~~vld~LDp~~~~f~~rlyRe~C~~~~g~~iKDLs~ 233 (301)
|.+.|.+ ..++.+.++++.+.+. +.+.|+|.+... --+.++..+|- ...|.|++++..
T Consensus 65 Vt~SGGE-----l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~~ 124 (147)
T TIGR02826 65 VLFLGGE-----WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRGG 124 (147)
T ss_pred EEEechh-----cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcCC
Confidence 4556655 3688999999999864 899999976542 12334444432 235666666665
Q ss_pred cCCCCCcEEEEEC
Q 022210 234 LGRDLARIAIVDN 246 (301)
Q Consensus 234 Lgrdls~vIIVDd 246 (301)
+++.-+|=+|+|-
T Consensus 125 ~~~~~sNQ~~~~~ 137 (147)
T TIGR02826 125 LGSPTTNQIFIDL 137 (147)
T ss_pred CCCCCcCceEEEC
Confidence 5554456666664
No 167
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=20.85 E-value=95 Score=26.24 Aligned_cols=50 Identities=16% Similarity=0.105 Sum_probs=32.6
Q ss_pred CCCcEEEEecCCce--eeeeecCeeeeEEEEeCchHHHHHHHHH-hCceEEEEcCCchH
Q 022210 140 GLPITLVLDLDDFS--FPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSI 195 (301)
Q Consensus 140 ~~K~tLVLDLDd~l--~~v~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~ 195 (301)
.++.+|++|+|-.- +...+.+. ..++.++.+++.+. +.|++||.=+....
T Consensus 27 ~g~~vllvD~D~q~~~~~~~~~~~------~~~~~l~~~~~~~~~~~yD~VIiD~pp~~ 79 (169)
T cd02037 27 LGYKVGLLDADIYGPSIPKMWRGP------MKMGAIKQFLTDVDWGELDYLVIDMPPGT 79 (169)
T ss_pred cCCcEEEEeCCCCCCCchHHHhCc------chHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 57899999999322 11111111 13566788888876 78999999887653
No 168
>PLN02887 hydrolase family protein
Probab=20.66 E-value=2.3e+02 Score=29.88 Aligned_cols=58 Identities=17% Similarity=0.033 Sum_probs=43.6
Q ss_pred CCCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHh-CceEEEEcCCchHHHHHHHHHHCC
Q 022210 140 GLPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP 206 (301)
Q Consensus 140 ~~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~vld~LDp 206 (301)
.+.+.+++|||+|++.-. . ..-|...+-|+++.+ -..++|=|.-...-+..+++.++.
T Consensus 306 ~~iKLIa~DLDGTLLn~d--~-------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSK--S-------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred cCccEEEEeCCCCCCCCC--C-------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 356788999999998321 1 146777788888885 488888888887888888888864
No 169
>PF14796 AP3B1_C: Clathrin-adaptor complex-3 beta-1 subunit C-terminal
Probab=20.46 E-value=54 Score=28.53 Aligned_cols=79 Identities=19% Similarity=0.197 Sum_probs=51.5
Q ss_pred CCcEEEEecCCceeeeeecCeeeeEEEEeCchHHHHHHHHHhCceEE---EEcCCc-hHHHHHHHHHHCCCCceeeeEEe
Q 022210 141 LPITLVLDLDDFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV---IFTAGQ-SIYAGQLLDILDPNQTLIGQRVY 216 (301)
Q Consensus 141 ~K~tLVLDLDd~l~~v~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIv---IfTas~-~~YA~~vld~LDp~~~~f~~rly 216 (301)
.|.-+.|||||+.++..... - ..-|-+-.||+-++.--.-. +++.+. +.--..+|+.+..+|--+.||+.
T Consensus 3 ~~~~~LLDLddf~~p~~~P~-----~-~~spsl~~~L~~ls~s~~~~~~~~~~ps~v~~k~~eLL~~v~G~GL~v~Y~F~ 76 (145)
T PF14796_consen 3 SKEDSLLDLDDFAVPPVAPV-----S-ILSPSLGSDLEGLSLSDSSSVPSVVSPSFVPPKKYELLNRVNGKGLSVEYRFS 76 (145)
T ss_pred cccccccccccccCCCcCCc-----c-ccCcchhhhccCCCcCcccccccccCCcccCcceEEeeeccCCCceeEEEEEc
Confidence 46677899999774433221 1 46788899998886332222 333333 22234578888888877899999
Q ss_pred cCccceeCC
Q 022210 217 RDSCVFADG 225 (301)
Q Consensus 217 Re~C~~~~g 225 (301)
|+-|.+...
T Consensus 77 RqP~~~s~~ 85 (145)
T PF14796_consen 77 RQPSLYSPS 85 (145)
T ss_pred cCCcCCCCC
Confidence 999987644
Done!