BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022213
(301 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 207 bits (528), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 152/248 (61%), Gaps = 5/248 (2%)
Query: 29 LASIIDS--VNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGI 86
+ +I+D+ V N + V+ L GDPT F T SGK+N YA + G
Sbjct: 16 IRAIVDNMKVKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGY 75
Query: 87 PPARRAIADYL-SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
+R +A Y + P L A DV +T GC QA+E+ L+VLA PG N+L+PRPG+ Y
Sbjct: 76 LSSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYR 133
Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
+A+ +EV+ ++LLPE++WE+DL +E+L D+ TA +V+ NP NPCG+VF+ HLQ+I
Sbjct: 134 TLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKI 193
Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
+A + V ++ADE+YG + F Y PM + VP+++ G ++ RWLVPGWR GW++
Sbjct: 194 LAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWIL 253
Query: 266 TNDPNGIF 273
+D IF
Sbjct: 254 IHDRRDIF 261
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 153/248 (61%), Gaps = 5/248 (2%)
Query: 29 LASIIDS--VNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGI 86
+ +I+D+ V N + ++ L GDPT F T SGK+N YA + G
Sbjct: 39 IRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGF 98
Query: 87 PPARRAIADYL-SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
+R IA Y + P L A DV +T GC QA+++ L+VLA PG N+L+PRPG+ Y+
Sbjct: 99 LSSREEIASYYHCPEAP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYK 156
Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
+A+ +EV+ ++LLPE++WE+DL +E L D+ TA +++ NP NPCG+VF+ HLQ+I
Sbjct: 157 TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKI 216
Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
+A + V ++ADE+YG + F Y P+ + VP+++ G ++KRWLVPGWR GW++
Sbjct: 217 LAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWIL 276
Query: 266 TNDPNGIF 273
+D IF
Sbjct: 277 IHDRRDIF 284
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 10/241 (4%)
Query: 41 PRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRD 100
P+P++ L GDPT T S + N Y G P AR A+A +
Sbjct: 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNS 91
Query: 101 LPYK------LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE 154
+K + D+V + G + + ++ + G L+P+PG+P+YE + + +
Sbjct: 92 FVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIG 151
Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
+ ++ PE +WE DLD + L D T +++ NP NPCG+ F+ H+++I +A +LR+
Sbjct: 152 MHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRL 211
Query: 215 MVVADEVYGHLTF-GSIP---YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270
+ +DE+Y + F G P +T + F + VP + LG + +VPGWR GWL+ DP+
Sbjct: 212 PLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPH 271
Query: 271 G 271
G
Sbjct: 272 G 272
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 3/227 (1%)
Query: 44 VVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
V+ L GDP F F+ + G N Y + G+P R+AI + R
Sbjct: 40 VIRLNIGDPVKFD-FQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGV 97
Query: 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163
++ DDV VT +A+++I L PG +L+P P +P Y G+ + + + + E
Sbjct: 98 DITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEE 157
Query: 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223
+W+ D+D + T A+ +INP NP G ++ L+EI +A + + V++DE+Y
Sbjct: 158 EDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYD 217
Query: 224 HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270
+T+ +P G VPVI + +SK + GWR G++ DP
Sbjct: 218 LMTYEGEHISP-GSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPE 263
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 21/198 (10%)
Query: 75 GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134
G+ + YA +G+P R A+A+ + + + V VT G +A+ V+L L PG V
Sbjct: 52 GRQDQYAPPAGLPALREALAE------EFAVEPESVVVTSGATEALYVLLQSLVGPGDEV 105
Query: 135 LLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192
++ P + Y + + + DL PE + +DL A+E T A+++ P NP
Sbjct: 106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNP 164
Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP-----YTPMGLFGSIVPVITL 247
G VF L+ IA +AR + +++DEVY L +G P + P F T+
Sbjct: 165 TGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTF-------TV 217
Query: 248 GSISKRWLVPGWRFGWLV 265
GS KR G+R GW+V
Sbjct: 218 GSAGKRLEATGYRVGWIV 235
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 42 RPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDL 101
+ V+ LG G+P F T G Y N G+ R AIA+ L +
Sbjct: 25 KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQ- 78
Query: 102 PYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEV 155
+ AD ++ V LG QA + LS + G VL+P P + Y +A K VEV
Sbjct: 79 -NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV 137
Query: 156 RHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215
++ E + +++D ++ T A++I +P NP G V T L+EIA+ + ++
Sbjct: 138 PTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLI 194
Query: 216 VVADEVYGHLTFGSI-PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264
V++DEVY H + Y+ L G IT+ SK + + GWR G++
Sbjct: 195 VISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFV 244
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 42 RPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDL 101
+ V+ LG G+P F T G Y N G+ R AIA+ L +
Sbjct: 26 KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQ- 79
Query: 102 PYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEV 155
+ AD ++ V LG QA + LS + G VL+P P + Y +A K VEV
Sbjct: 80 -NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV 138
Query: 156 RHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215
++ E + +++D ++ T A++I +P NP G V T L+EIA+ + ++
Sbjct: 139 PTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLI 195
Query: 216 VVADEVYGHLTFGSI-PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264
V++DEVY H + Y+ L G IT+ SK + + GWR G++
Sbjct: 196 VISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFV 245
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
YA +GIP R A+A+ R+ ++ ++ VT+G KQA+ + + PG V++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
W Y + + V + LPE + D + V T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
L+ +A +A + +V+DE+Y HL + ++P G + P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGW 263
GWR G+
Sbjct: 240 GWRIGY 245
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
YA +GIP R A+A+ R+ ++ ++ VT+G QA+ + + PG V++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
W Y + + V + LPE + D + V T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
L+ +A +A + +V+DE+Y HL + ++P G + P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGW 263
GWR G+
Sbjct: 240 GWRIGY 245
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
YA +GIP R A+A+ R+ ++ ++ VT+G QA+ + + PG V++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
W Y + + V + LPE + D + V T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
L+ +A +A + +V+DE+Y HL + ++P G + P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGW 263
GWR G+
Sbjct: 240 GWRIGY 245
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
YA +GIP R A+A+ R+ ++ ++ VT+G QA+ + + PG V++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
W Y + + V + LPE + D + V T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
L+ +A +A + +V+DE+Y HL + ++P G + P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGW 263
GWR G+
Sbjct: 240 GWRIGY 245
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
YA +GIP R A+A+ R+ ++ ++ VT+G QA+ + + PG V++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
W Y + + V + LPE + D + V T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
L+ +A +A + +V+DE+Y HL + ++P G + P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGW 263
GWR G+
Sbjct: 240 GWRIGY 245
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
YA +GIP R A+A+ R+ ++ ++ VT+G KQA+ + + PG V++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
W Y + + V + LPE + D + V T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
L+ +A +A + +V+DE+Y HL + ++P G + P +T+ + + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAMT 239
Query: 258 GWRFGW 263
GWR G+
Sbjct: 240 GWRIGY 245
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
Y GI R IA + +S D V VT G KQA+ L PG V++ P
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
W Y V + +N++ L+ VE L T A++I +P NP G V+
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259
L+ + +A+K +++DEVY L + + + + ++ + SK + GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 260 RFGWLVTND 268
R G+L++++
Sbjct: 254 RVGYLISSE 262
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 10/251 (3%)
Query: 19 AAPAVTVKTSLASIIDS---VNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSG 75
AA +V S+ IID+ K + V G+P F T G
Sbjct: 4 AARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG 59
Query: 76 KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL 135
K Y +G P R AIA L RD AD++ VT G KQ++ ++ + PG V+
Sbjct: 60 KTR-YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVI 118
Query: 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195
+P P W Y + + + E ++V + + T +V P NP G
Sbjct: 119 IPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGM 178
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG--SIVPVITLGSISKR 253
V+T ++ IA++A + + V++DE+Y + + + +G + + +K
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238
Query: 254 WLVPGWRFGWL 264
+ + GWR G+L
Sbjct: 239 YAMTGWRVGFL 249
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 78 NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARPGANVLL 136
N Y G P +A++ S+ + ++ +V VT+G +A+ + G V++
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 137 PRPGWPYYEGIAQRKQVEVRHFDLLPER--------NWEVDLDAVEALADKNTAAMVIIN 188
P + YE + + R L P + +W +D + +EAL ++ T ++I
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITL 247
P NP G V L+ +A + +K V+ V+DEVY H+ F + + L G IT+
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI 250
Query: 248 GSISKRWLVPGWRFGW 263
GS K + + GW+ GW
Sbjct: 251 GSAGKTFSLTGWKIGW 266
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 2/157 (1%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWE 167
+V VT+G +A+ + L PG+ VLL P + Y + L+P+ R +
Sbjct: 88 EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFA 147
Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF 227
+D DA+ T A++I +P NP G V + L IAE+A ++V+ DEVY HL F
Sbjct: 148 LDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVF 207
Query: 228 GSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGW 263
+ P+ F G IT+ S + + GW+ GW
Sbjct: 208 DHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW 244
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
Y+ ++GI R A A Y R + ++V VT G +A+ +V+A PG +L+ P
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
+ Y A+ V++ E + + + +E+ ++ T +V+ NP NP G V+
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIPQN-LESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV-----PVITLGSISKRW 254
+ + E+A + + ++ DEVY + F G F S + V+ + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 255 LVPGWRFGWLVTNDPNGI 272
G R G L+T + I
Sbjct: 247 SACGARVGCLITRNEELI 264
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 78 NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARPGANVLL 136
N Y G P +A++ S+ + ++ +V VT+G +A+ + G V++
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 137 PRPGWPYYEGIAQRKQVEVRHFDLLPER--------NWEVDLDAVEALADKNTAAMVIIN 188
P + YE + + R L P + +W +D + +EAL ++ T ++I
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITL 247
P NP G V L+ +A + +K V+ V+DEVY H+ F + + L G IT+
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI 250
Query: 248 GSISKRWLVPGWRFGW 263
GS + + GW+ GW
Sbjct: 251 GSAGXTFSLTGWKIGW 266
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137
N Y+ G P ++ S +L A++V VT G + + L L G V++
Sbjct: 89 NQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVF 148
Query: 138 RPGWPYYEGIAQRKQVEVRHFDLLP-----ERN-----WEVDLDAVEALADKNTAAMVII 187
P + Y + +V + + P +RN W +D + E T A++I
Sbjct: 149 EPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN 208
Query: 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247
P NP G VFT L + + K V++++DEVY HL F +T + + +TL
Sbjct: 209 TPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTL 267
Query: 248 --GSISKRWLVPGWRFGWLVT 266
GS + GWR GW+++
Sbjct: 268 TVGSAGXSFAATGWRIGWVLS 288
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 74 SGKF--NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARP 130
SG F N Y G PP + +A + L ++ +V VT+G A+ L
Sbjct: 55 SGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDE 114
Query: 131 GANVLLPRPGWPYYEGIAQR----------KQVEVRHFDLLPERNWEVDLDAVEALADKN 180
G V++ P + YE + K +++ +L NW++D +
Sbjct: 115 GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR 174
Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY--------GHLTFGSIPY 232
T A+V+ P NP G VF+ L+ +A + ++ V+ + DEVY H++ S+P
Sbjct: 175 TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLP- 233
Query: 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
G +T+GS K + GW+ GW++ D
Sbjct: 234 ------GMWERTLTIGSAGKTFSATGWKVGWVLGPD 263
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 74 SGKF--NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARP 130
SG F N Y G PP + +A + L ++ +V VT+G A+ L
Sbjct: 55 SGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDE 114
Query: 131 GANVLLPRPGWPYYEGIAQR----------KQVEVRHFDLLPERNWEVDLDAVEALADKN 180
G V++ P + YE + K +++ +L NW++D +
Sbjct: 115 GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR 174
Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY--------GHLTFGSIPY 232
T A+V+ P NP G VF+ L+ +A + ++ V+ + DEVY H++ S+P
Sbjct: 175 TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLP- 233
Query: 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
G +T+GS + GW+ GW++ D
Sbjct: 234 ------GMWERTLTIGSAGXTFSATGWKVGWVLGPD 263
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 74 SGKF--NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARP 130
SG F N Y G PP + +A + L ++ +V VT+G A+ L
Sbjct: 55 SGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDE 114
Query: 131 GANVLLPRPGWPYYEGIAQR----------KQVEVRHFDLLPERNWEVDLDAVEALADKN 180
G V++ P + YE + K +++ +L NW++D +
Sbjct: 115 GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR 174
Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY--------GHLTFGSIPY 232
T A+V+ P NP G VF+ L+ +A + ++ V+ + DEVY H++ S+P
Sbjct: 175 TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLP- 233
Query: 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
G +T+GS + GW+ GW++ D
Sbjct: 234 ------GMWERTLTIGSAGXTFSATGWKVGWVLGPD 263
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPR 138
Y T G P R + +L + Y +S D D+ +T G +QA+++I V PG V++
Sbjct: 69 YGTTKGFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEA 126
Query: 139 P-------GWPYYEGIAQRKQV----EVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187
P + +YE Q Q+ E ++L E+ L +++ K +
Sbjct: 127 PTYLAALQAFNFYE--PQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVP 179
Query: 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247
NP G + + E+A + +VV D+ YG L + P + + VI L
Sbjct: 180 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYL 239
Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-CLSIYSDI 292
G+ SK L PG+R GW+V DP GI +K I D C +++ +
Sbjct: 240 GTFSK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQSTDLCTNVFGQV 282
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPR 138
Y T G P R + +L + Y +S D D+ +T G +QA+++I V PG V++
Sbjct: 114 YGTTKGFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEA 171
Query: 139 P-------GWPYYEGIAQRKQV----EVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187
P + +YE Q Q+ E ++L E+ L +++ K +
Sbjct: 172 PTYLAALQAFNFYE--PQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVP 224
Query: 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247
NP G + + E+A + +VV D+ YG L + P + + VI L
Sbjct: 225 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYL 284
Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-CLSIYSDI 292
G+ SK L PG+R GW+V DP GI +K I D C +++ +
Sbjct: 285 GTFSK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQSTDLCTNVFGQV 327
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 38 KNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYL 97
+++ + V+ L G+P F T + GK + Y + GI R I++
Sbjct: 25 ESEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEGKTH-YTDSRGILELREKISELY 79
Query: 98 SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
+ D++ +T G + LS + G VL+ P +P Y+ + +
Sbjct: 80 KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVF 139
Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
D E EAL+DK T A++I +P NP G V +EI E A + ++
Sbjct: 140 CDFTVE-------SLEEALSDK-TKAIIINSPSNPLGEVID----REIYEFAYENIPYII 187
Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
+DE+Y L + Y+ + ++ I + S + + GWR G++++ND
Sbjct: 188 SDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISND 238
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 80 YATNSGIPPARRAIADYLSR-DLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN----V 134
Y+ + G+ R +A Y++R D D++Y+T G + IL +L G V
Sbjct: 125 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGV 184
Query: 135 LLPRPGWPYYEG-IAQRKQVEVRHFDLLPERNWEVDLD----AVEALADK-NTAAMVIIN 188
++P P +P Y I++ ++V ++ L E W ++++ AV+ D + + IIN
Sbjct: 185 MIPIPQYPLYSAVISELDAIQVNYY-LDEENCWALNVNELRRAVQEAKDHCDPKVLCIIN 243
Query: 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG---------HLTFGSIPYTPMGLFG 239
PGNP G V + ++++ A + ++ ++ADEVY +F + Y +
Sbjct: 244 PGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303
Query: 240 SIVPVITLGSISKRWLVP-GWRFGWL 264
S V + + S SK ++ G+R G++
Sbjct: 304 SNVELASFHSTSKGYMGECGYRGGYM 329
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 78 NCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLL 136
N YA +G+ R AIA R Y+ AD D+ VT G +A+ ++ L R G V+
Sbjct: 61 NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 137 PRPGWPYYE-------GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189
P + Y GI +R ++ HF VD AL + T +++ P
Sbjct: 121 FDPSYDSYAPAIALSGGIVKRMALQPPHF--------RVDWQEFAALLSERTRLVILNTP 172
Query: 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLG 248
NP V+ + + + V++DEVY H+ F + + + + +
Sbjct: 173 HNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVS 232
Query: 249 SISKRWLVPGWRFGWLVTNDP 269
S K + + GW+ G+ V P
Sbjct: 233 SFGKTYHMTGWKVGYCVAPAP 253
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 78 NCYATNSGIPPARRAIADYLSRDLPYKLSAD---DVYVTLGCKQAVEVILSVLARPGANV 134
+ Y+T+ GIP RRAI+ + RD Y + D + VT+G K+ + ++ G +
Sbjct: 69 HGYSTSRGIPRLRRAISHWY-RDR-YDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTI 126
Query: 135 LLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCG 194
L+P P +P + A +VR L+P ++ +L+ + M++ P NP
Sbjct: 127 LVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTA 186
Query: 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF-GSIPYTPMGLFGSIVPVITLGSISKR 253
+ + +A++ VMVV D Y + + G + M + G+ + ++SK
Sbjct: 187 QCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKS 246
Query: 254 WLVPGWRFGWLVTN 267
+ + GWR G++V N
Sbjct: 247 YNMAGWRIGFMVGN 260
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
Y G P +++++ + P + + T G A ++L L PG +V+ P
Sbjct: 59 YGWIEGSPAFKKSVSQLYTGVKP-----EQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
+ I + EV + + E W DL+ + L T + I N NP G V
Sbjct: 114 TYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDR 173
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV----ITLGSISKRWL 255
+L+E+ E+A ++ +++DEVY + +P SI+ V I + S+S +
Sbjct: 174 TYLEELVEIASEVGAYILSDEVYRSFSELDVP--------SIIEVYDKGIAVNSLSXTYS 225
Query: 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKD----CLSIYSDI 292
+PG R GW+ N Q + I+ +D C ++ D+
Sbjct: 226 LPGIRIGWVAAN-----HQVTDILRDYRDYTXICAGVFDDL 261
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 10/216 (4%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
Y T G P R A+A ++ + +S ++ G +QA+++I V PG +++ P
Sbjct: 79 YGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAP 138
Query: 140 GWPYYEGIAQRKQVEVRHFDL-LPERNWEVDLDAVEALADKNTAAMVII-----NPGNPC 193
Y I K + + L ++ VDL + + V I NP
Sbjct: 139 T--YLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPA 196
Query: 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR 253
G + +++ E+A + ++V D Y L + P P+ F VI LG+ SK
Sbjct: 197 GVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK- 255
Query: 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY 289
L PG+R GW+ + P+ I + SI C + +
Sbjct: 256 ILAPGFRIGWVAAH-PHLIRKMEIAKQSIDLCTNTF 290
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 93 IADYLSRDLPYK----LSADDVYVTLGCKQAVEVILSVLA-----RPGANVLLPRPGWPY 143
I +Y ++L YK D++ T G A+ LA + G + + P +
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 144 YEGIAQRKQVEVRHFDL--LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201
Y I + K E+ DL + +WE++ + +E L D + A++++NP NP F +
Sbjct: 206 YLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNA 265
Query: 202 LQEIAEMARKL-RVMVVADEVYGHL--TFGSIPYTPMGLFGSIVPVIT--LGSISKRWLV 256
L I + K ++ +++DEVYG F SI S+VP T + S S +
Sbjct: 266 LNAIKQAVEKNPKLXIISDEVYGAFVPNFKSIY--------SVVPYNTXLVYSYSXLFGC 317
Query: 257 PGWRFGWLVTNDPN 270
GWR G + N+ N
Sbjct: 318 TGWRLGVIALNEKN 331
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP-R 138
Y + G R AIA++L+ +AD++Y T G ++ + L + +
Sbjct: 72 YTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIA 131
Query: 139 PGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195
P +P Y+ A + VEV ++++D DA+E + +T ++I +P NP G
Sbjct: 132 PYFPEYKVFVNAAGARLVEVP----ADTEHFQIDFDALEERINAHTRGVIINSPNNPSGT 187
Query: 196 VFTYHHLQEIAEMARKLR------VMVVADEVYGHLTFGSI--PYTPMGLFGSIVPVITL 247
V++ +++++++ K + ++ADE Y + + I P+ ++V
Sbjct: 188 VYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCY--- 244
Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI 282
S SK +PG R G+++ P+ ++ K+ + ++
Sbjct: 245 -SYSKSLSLPGERIGYVLV--PDEVYDKAELYAAV 276
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 77 FNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARPGANVL 135
N Y G P +A++ + ++ +++ V +G ++ + L PG V+
Sbjct: 54 MNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVI 113
Query: 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPER----------NWEVDLDAVEALADKNTAAMV 185
+ P + YE + R V F L + +W D +E+ T A++
Sbjct: 114 IMVPFYDCYEPMV-RMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAII 172
Query: 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-LFGSIVPV 244
+ P NP G V+T LQ IA++ K + ++DEVY L + + + L G
Sbjct: 173 LNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERT 232
Query: 245 ITLGSISKRWLVPGWRFGWLV 265
IT+GS K + V GW+ GW +
Sbjct: 233 ITIGSAGKTFSVTGWKLGWSI 253
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-VLLPR 138
Y+ + GI R AIA ++ + +ADD+++T G V +++ +L R + +L+P
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL-DAVEALADK-----NTAAMVIINPGNP 192
P +P Y + + L W ++ D + L D N A+V+INPGNP
Sbjct: 190 PQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNP 249
Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVY 222
G V + +I + + ++++ADEVY
Sbjct: 250 TGQVLAEENQYDIVKFCKNEGLVLLADEVY 279
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 77 FNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARPGANVL 135
N Y G P +A++ + ++ +++ V +G ++ + L PG V+
Sbjct: 54 MNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVI 113
Query: 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPER----------NWEVDLDAVEALADKNTAAMV 185
+ P + YE + R V F L + +W D +E+ T A++
Sbjct: 114 IMVPFYDCYEPMV-RMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAII 172
Query: 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-LFGSIVPV 244
+ P NP G V+T LQ IA++ K + ++DEVY L + + + L G
Sbjct: 173 LNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERT 232
Query: 245 ITLGSISKRWLVPGWRFGWLV 265
IT+GS + V GW+ GW +
Sbjct: 233 ITIGSAGXTFSVTGWKLGWSI 253
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 85 GIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
G+P ++A+ D+++ K++ D + +T G A E + LA PG VL+P P +P
Sbjct: 70 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 129
Query: 143 YYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVEAL---ADKNT---AAMVIINPGNPCGN 195
++ + R VE+ +++ A+E A+K +++ NP NP G
Sbjct: 130 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 189
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFGSIV--PVITLGSISK 252
T + L + + +++DE+Y F S + + M + V V + S+S
Sbjct: 190 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSLSX 249
Query: 253 RWL-VPGWRFGWLVTND 268
+ L +PG+R G + +ND
Sbjct: 250 KDLGLPGFRVGAIYSND 266
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 85 GIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
G+P ++A+ D+++ K++ D + +T G A E + LA PG VL+P P +P
Sbjct: 85 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 144
Query: 143 YYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVEAL---ADKNT---AAMVIINPGNPCGN 195
++ + R VE+ +++ A+E A+K +++ NP NP G
Sbjct: 145 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 204
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI---------- 245
T + L + + +++DE+Y F S F S++ V+
Sbjct: 205 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS------FISVMEVLKDRNCDENSE 258
Query: 246 ------TLGSISKRWLVPGWRFGWLVTND 268
+ S+SK +PG+R G + +ND
Sbjct: 259 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 287
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 85 GIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
G+P ++A+ D+++ K++ D + +T G A E + LA PG VL+P P +P
Sbjct: 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 143 YYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVEAL---ADKNT---AAMVIINPGNPCGN 195
++ + R VE+ +++ A+E A+K +++ NP NP G
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI---------- 245
T + L + + +++DE+Y F S F S++ V+
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS------FISVMEVLKDRNCDENSE 260
Query: 246 ------TLGSISKRWLVPGWRFGWLVTND 268
+ S+SK +PG+R G + +ND
Sbjct: 261 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 289
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 85 GIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
G+P ++A+ D+++ K++ D + +T G A E + LA PG VL+P P +P
Sbjct: 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 143 YYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVEAL---ADKNT---AAMVIINPGNPCGN 195
++ + R VE+ +++ A+E A+K +++ NP NP G
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI---------- 245
T + L + + +++DE+Y F S F S++ V+
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS------FISVMEVLKDRNCDENSE 260
Query: 246 ------TLGSISKRWLVPGWRFGWLVTND 268
+ S+SK +PG+R G + +ND
Sbjct: 261 VWQRVHVVYSLSKDLGLPGFRVGAIYSND 289
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 80 YATNSGIPPARRAIADYLSRDLP-YKLSAD-DVYVTLGCKQAVEVILSVLARPGAN---- 133
Y +G+P R+A A++L R + AD ++ LG ++A+ + + P ++
Sbjct: 62 YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 134 -VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192
++ P P + YEG E+ HF P ++ D ++ K T + + +P NP
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNP 180
Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-------LFGSIVPVI 245
G+V +E+ ++ K ++ +DE Y + F P+G L S ++
Sbjct: 181 SGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDG--NKPLGCLQAAAQLGRSRQKLL 238
Query: 246 TLGSISKRWLVPGWRFGWLVTN 267
S+S R VPG R G++ +
Sbjct: 239 XFTSLSXRSNVPGLRSGFVAGD 260
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 91 RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---I 147
+A+ D+ + Y +D+ G A+ + + + G VL+ P +P + +
Sbjct: 73 QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 148 AQRKQVEVRHFDLLPERN--WEVDLDAVEA-LADKNTAAMVIINPGNPCGNVFTYHHLQE 204
RK V + L E N +++D + +E + + + ++ NP NP G V+ L++
Sbjct: 133 NNRKLVS----NSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQ 188
Query: 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGW 259
I + +K V++V+DE++ LT + F ++ P + L S +K + + G
Sbjct: 189 IGHLCQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGT 245
Query: 260 RFGWLVTNDPN--GIFQKSGIIDSIKDCLSI 288
+ + + +P F+ ++++ + S+
Sbjct: 246 KNSYAIIENPTLCAQFKHQQLVNNHHEVSSL 276
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138
Y +GIP R +A +L + ++S +++ +T+G A++++ VL PG V+
Sbjct: 70 MYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITEN 129
Query: 139 PGW-----PYYEGIAQRKQVEVRH----FDLLPERNWEVDLDAVEALADKNTAAMVIINP 189
P + + + A+ + V V + DLL E+ E ++A K I
Sbjct: 130 PSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKE-----LKAKGQKVKLIYTIPTG 184
Query: 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249
NP G + + + E+A K ++++ D Y + + P+ + VI G+
Sbjct: 185 QNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGT 244
Query: 250 ISKRWLVPGWRFGWLVTN 267
+SK L G+R GW++
Sbjct: 245 LSK-VLGTGFRIGWIIAE 261
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 85 GIPPARRAIADYLSRDLPYKLSADDVYVTL--GCKQAVEVILSVLARPGANVLLPRPGWP 142
G+P R+AIA ++ + ++ D V + G A E I+ LA PG L+P P +P
Sbjct: 84 GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 143 YY-EGIAQRKQVEVRHFDLLPERNWEVDLDAV-EALADKNTA-----AMVIINPGNPCGN 195
+ + R V++ N+++ AV EA + + +++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGT 203
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG--------LFGSIVPVITL 247
L+ + + + +V DE+Y F + + + + + V +
Sbjct: 204 TLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIV 263
Query: 248 GSISKRWLVPGWRFG 262
S+SK +PG+R G
Sbjct: 264 YSLSKDMGLPGFRVG 278
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 4/190 (2%)
Query: 75 GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134
G+ + + N +A+ D+ ++ Y + +D+ G A+ + L + G V
Sbjct: 87 GREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAV 146
Query: 135 LLPRP-GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGNP 192
L+ P +P+ I V + + +E+D + +E + D N ++ +P NP
Sbjct: 147 LINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNP 206
Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVP-VITLGSI 250
G V+ L +IAE+ +K V++V+DE++ L FG+ ++ L S I L S
Sbjct: 207 GGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSA 266
Query: 251 SKRWLVPGWR 260
+K + + G +
Sbjct: 267 TKTFNIAGTK 276
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWE 167
+ +G ++ + +L L P +LLP +P Y G A + +R F L+P R +
Sbjct: 89 EALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAA--RVASLRTF-LIPLREDGL 145
Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF 227
DL AV + +++ P NP G V + + +E +ARK + ++ D Y +
Sbjct: 146 ADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVY 205
Query: 228 GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP--NGIFQKSGIID 280
+P+ L G+ V+ L S+SK + + G+R G+ + ++ + + G+ID
Sbjct: 206 EGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVID 260
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 90 RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP-GWPYYEGIA 148
++ + ++ + + D + T G AV + +PG V++ P +P++ I
Sbjct: 72 KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK 131
Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207
+++ + L + + +D +E L+ DKN A++ +P NP G V+ LQ+I +
Sbjct: 132 NQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKD 191
Query: 208 MARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-----VPVITLGSISKRWLVPGWRFG 262
+ K +M+ +DE++ L +T +F SI IT + SK + + G
Sbjct: 192 IVLKSDLMLWSDEIHFDLIMPGYEHT---VFQSIDEQLADKTITFTAPSKTFNIAGMGMS 248
Query: 263 WLVTNDPN 270
++ +P+
Sbjct: 249 NIIIKNPD 256
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 91 RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR 150
+A+AD+ + + D G A+ + PG +L+ P + + + +
Sbjct: 69 KAVADWEEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEG 128
Query: 151 KQVEVRHFDLLPER-----NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
V DL+ E NW D E LA + V NP NP G ++ ++ I
Sbjct: 129 NGRRVISSDLIYENSKYSVNW---ADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRI 185
Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV 256
AE+ K +V++++DE++G L I P T+ +K W+V
Sbjct: 186 AELCAKHQVLLISDEIHGDLVLTD---------EDITPAFTVDWDAKNWVV 227
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
Y+ G P R +A+++ + ++V +T G +QA++++ V G+ VLL P
Sbjct: 70 YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG--NPCGNVF 197
Y G Q +++ F +P DLDA+E + + + + P NP G +
Sbjct: 124 S---YMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IP-YTPMGLFGSIVPVITLGSISKRW 254
+ + +M + ++VV D+ Y L FG +P + VI LGS SK
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 255 LVPGWRFGWLVTN 267
L PG R + V +
Sbjct: 240 LSPGLRVAFAVAH 252
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 90 RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
R+ +AD+ Y+L +++ T G + +E++ VL N + P + Y A
Sbjct: 73 RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
+ EVR LL ++ E DL+ D+ T + I NP NP GN Y L +I
Sbjct: 127 IEGAEVREIPLL--QDGEHDLEGXLNAIDEKTTIVWICNPNNPTGN---YIELADIQAFL 181
Query: 210 RKL--RVMVVADEVY 222
++ V+VV DE Y
Sbjct: 182 DRVPSDVLVVLDEAY 196
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 108 DDVYVTLGCKQAVEVILSVLARPGAN-VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166
+ V V+ G + +E+++ PG + +L P + Y A+ VE R L NW
Sbjct: 76 EQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLD--NW 133
Query: 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226
++DL + D + + +P NP G + + + E+ R + +VVADE Y
Sbjct: 134 QLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRG-KAIVVADEAY---- 187
Query: 227 FGSIPYTPM----GLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
I + P G + L ++SK + + G R G+ + N+
Sbjct: 188 ---IEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 108 DDVYVTLGCKQAVEVILSVLARPGAN-VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166
+ V V+ G + +E+++ PG + +L P + Y A+ VE R L NW
Sbjct: 76 EQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIGVECRTVPTLD--NW 133
Query: 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226
++DL + D + + +P NP G + + + E+ R + +VVADE Y
Sbjct: 134 QLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRG-KAIVVADEAY---- 187
Query: 227 FGSIPYTPM----GLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
I + P G + L ++SK + + G R G+ + N+
Sbjct: 188 ---IEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 97 LSRDLPYKLSADDVYVTLG--CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE 154
L++ + L D+ + LG + +E+ +S+ + +L+ P + YE A++ V
Sbjct: 66 LNKSIENYLKLKDIGIVLGNGASEIIELSISLFEK----ILIIVPSYAEYEINAKKHGVS 121
Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
V F L E N +D + + + D + +++I NP NP G + + ++A + +
Sbjct: 122 VV-FSYLDE-NMCIDYEDIISKID-DVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKK 178
Query: 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
++ DE + T G + +G + + + +++K + +PG RFG+ +TN+
Sbjct: 179 TIIIDEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK 232
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 14/193 (7%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYK-LSADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138
Y+T G P ++ I L R L D++ T+G +QA+++I + + +L
Sbjct: 81 YSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140
Query: 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE---ALADKNTAA------MVIINP 189
P Y G + + +F ++P + DL+ +E + DKN V+ N
Sbjct: 141 PA---YLGAINAFRQYLANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNF 197
Query: 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249
NP G + + + E+A K + +V D+ YG L + P+ G V+ L +
Sbjct: 198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNT 257
Query: 250 ISKRWLVPGWRFG 262
SK L PG R G
Sbjct: 258 FSK-VLAPGLRIG 269
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 84/235 (35%), Gaps = 22/235 (9%)
Query: 44 VVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLP 102
V+ LG GD T P T G ++ Y G P R AIA L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVE---- 154
+ DDV+V+ G K + L V+ + + P +P Y + Q Q
Sbjct: 116 -GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQ 173
Query: 155 ----VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
+ + PE + DL V T + +P NP G T L ++ E A+
Sbjct: 174 KYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
K ++V D Y P + + G+ + S SK G R GW V
Sbjct: 229 KNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTV 283
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 91 RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR 150
+I ++L R +K+ ++ + + G A+ ++++ L + +++ P + + + +
Sbjct: 74 ESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKN 133
Query: 151 KQVE--VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
E + L N+ +D + +E K+ ++ NP NP G V+T L+++ ++
Sbjct: 134 NNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDI 192
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMG 236
K V +++DE++ + + PM
Sbjct: 193 CLKHNVKIISDEIHSDIILKKHKHIPMA 220
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 15/190 (7%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
Y + G+P R+ +++ R + A +++++ G K + +LS P V + P
Sbjct: 71 YGPDFGLPALRQKLSEDFYRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDP 126
Query: 140 GWPYYEGIAQRKQV-EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198
+P Y IA+ E+ L E + + D + + + +P NP G V
Sbjct: 127 SYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE-----DTHIDILCLCSPNNPTGTVLN 181
Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---GSIVPVITLGSISKRWL 255
L+ I A + ++++ D Y TF S P P +F + I + S SK
Sbjct: 182 KDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPLG 239
Query: 256 VPGWRFGWLV 265
G R GW V
Sbjct: 240 FAGIRLGWTV 249
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP----- 162
D + +T G + A+ + ++ G V + +P + A RK VE + +P
Sbjct: 103 DGLIITPGTQGALFLAVAATVARGDKVAIVQPDY-----FANRKLVEFFEGEXVPVQLDY 157
Query: 163 ----ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
E +DL +E + NP NP G V++ + +IA +A + V+A
Sbjct: 158 VSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIA 217
Query: 219 DEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRFG 262
D++Y L + YT + ++ V+T+ S + G+R G
Sbjct: 218 DQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 84/235 (35%), Gaps = 22/235 (9%)
Query: 44 VVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLP 102
V+ LG GD T P T G ++ Y G P R AIA L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVE---- 154
+ DDV+V+ G K + L V+ + + P +P Y + Q Q
Sbjct: 116 -GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQ 173
Query: 155 ----VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
+ + PE + DL V T + +P NP G T L ++ E A+
Sbjct: 174 KYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
K ++V D Y P + + G+ + S S+ G R GW V
Sbjct: 229 KNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTV 283
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 83/235 (35%), Gaps = 22/235 (9%)
Query: 44 VVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLP 102
V+ LG GD T P T G ++ Y G P R AIA L
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVE---- 154
+ DDV+V+ G K + L V+ + + P +P Y + Q Q
Sbjct: 116 -GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQ 173
Query: 155 ----VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
+ + PE + DL V T + +P NP G T L ++ E A+
Sbjct: 174 KYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
K ++V D Y P + + G+ + S S G R GW V
Sbjct: 229 KNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTV 283
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 8/192 (4%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPR 138
Y G ++AI D+ R L +D V + G K + + + + PG VLLP
Sbjct: 81 YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPD 140
Query: 139 PGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195
PG+ Y +A K V + L ++ D V++ T + + P NP G+
Sbjct: 141 PGYTDYLAGVLLADGKPVPLN----LEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGS 196
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255
T E + +V D YG F + + + I + S+SK +
Sbjct: 197 TATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYN 256
Query: 256 VPGWRFGWLVTN 267
G+R G+ V N
Sbjct: 257 XSGFRVGFAVGN 268
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 85/235 (36%), Gaps = 22/235 (9%)
Query: 44 VVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLP 102
V+ LG GD T P T G ++ Y G P R AIA L
Sbjct: 58 VISLGIGDTTEPIPEVITSAXAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY------EGIAQRKQVEVR 156
+ DDV+V+ G K + L V + + P +P Y G + +V+
Sbjct: 116 -GIGDDDVFVSDGAKCDISR-LQVXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQ 173
Query: 157 HFDLL------PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
+ + PE + DL V T + +P NP G T L ++ E A+
Sbjct: 174 KYGNIEYXRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
K ++V D Y P + + G+ S SK G R GW V
Sbjct: 229 KNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTV 283
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 25/178 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
D+ VT G +Q + + ++ PG NVLL P Y G Q V +
Sbjct: 110 DLCVTSGSQQGLXKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
+P+ W+ + DA + + N NP GN T +EI E+ARK
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTF--GSIP-YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
+++ D+ Y L F G +P + M + G ++ + I + G R G+L P
Sbjct: 226 LIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP 279
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 8/187 (4%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
Y G+P R+ IA L V +T G + + L G V + P
Sbjct: 64 YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWE-VDLDAVEALADKNTAAMVIINPGNPCGNVFT 198
G+P Y I + + PE + V D A + A + + +P NP G
Sbjct: 124 GYPSYRQILRALGLVPVDLPTAPENRLQPVPAD----FAGLDLAGLXVASPANPTGTXLD 179
Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258
+ + E A+ ++DE+Y + + + T + L + S SK + G
Sbjct: 180 HAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE---CYVINSFSKYFSXTG 236
Query: 259 WRFGWLV 265
WR GW V
Sbjct: 237 WRVGWXV 243
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 84/198 (42%), Gaps = 5/198 (2%)
Query: 91 RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR 150
+A A++ + Y+ + ++ + + + + + V++P P +P + +
Sbjct: 65 QATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSA 124
Query: 151 KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
Q E + + ++L VE ++++ NP NP G VF L E+ ++A
Sbjct: 125 TQRE----GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXVFAPEWLNELCDLAH 180
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV-ITLGSISKRWLVPGWRFGWLVTNDP 269
+ V+ DE++ L F G+ + V IT+ + S W + G + ++ ++P
Sbjct: 181 RYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWNIAGLKCAQIIFSNP 240
Query: 270 NGIFQKSGIIDSIKDCLS 287
+ + IKD S
Sbjct: 241 SDAEHWQQLSPVIKDGAS 258
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 25/178 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
D+ VT G +Q + + ++ PG NVLL P Y G Q V +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
+P+ W+ + DA + + N NP GN T +EI E+ARK
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTF--GSIP-YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
+++ D+ Y L F G +P + M + G ++ + I + G R G+L P
Sbjct: 226 LIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP 279
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 90 RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
R +A Y+++ ++ D+++ G + ++ +L PG L +P + + +A+
Sbjct: 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 150 RKQVEVRHFDLLPERNWEVDLD-AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
E + ++ +D+D A+E + K + + P NP G+V + ++ I +
Sbjct: 135 GTHTEF--IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
A + V+ DE Y F P L ++ ++SK + G R G+ V N
Sbjct: 193 APGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 246
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 90 RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
R +A Y+++ ++ D+++ G + ++ +L PG L +P + + +A+
Sbjct: 72 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 131
Query: 150 RKQVEVRHFDLLPERNWEVDLD-AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
E + ++ +D+D A+E + K + + P NP G+V + ++ I +
Sbjct: 132 GTHTEF--IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 189
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
A + V+ DE Y F P L ++ ++SK + G R G+ V N
Sbjct: 190 APGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 243
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-----VLLP-RPGWPYY--EGIAQRKQ 152
L + + ++ +T G + A + ++ A A+ VL P P + Y G+
Sbjct: 92 LGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLF 151
Query: 153 VEVR-HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211
V R + +LLPE ++ +D + T + + P NP GNV T L ++ +A +
Sbjct: 152 VSARPNIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGNVITDEELXKLDRLANQ 211
Query: 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVT 266
+ +V D YG +P+ P +F P +I S+SK L PG R G ++
Sbjct: 212 HNIPLVIDNAYG------VPF-PGIIFSEARPLWNPNIILCXSLSKLGL-PGSRCGIIIA 263
Query: 267 NDP--NGIFQKSGII 279
ND I +GII
Sbjct: 264 NDKTITAIANXNGII 278
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 92 AIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRK 151
AIA + S + + V V ++ + G V++ P + + +
Sbjct: 72 AIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGN 131
Query: 152 QVEVRHFDLLPERN-WEVDLDAVEA-LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
Q V L + + W D+ +EA LA M++ +P NP G V+T L+ +A++
Sbjct: 132 QRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLC 191
Query: 210 RKLRVMVVADEVYGHLTFGSIPYTP 234
+ V V++DE++ + +G P+ P
Sbjct: 192 ERHGVRVISDEIHMDMVWGEQPHIP 216
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
D+ VT G +Q + + ++ PG NVLL P Y G Q V +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
+P+ W+ + DA + + N NP GN T +EI E+ARK
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
+++ D+ Y L F + M + G ++ + I + G R G+L P
Sbjct: 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP 279
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
D+ VT G +Q + + ++ PG NVLL P Y G Q V +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
+P+ W+ + DA + + N NP GN T +EI E+ARK
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
+++ D+ Y L F + M + G ++ + I + G R G+L P
Sbjct: 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP 279
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 116/292 (39%), Gaps = 49/292 (16%)
Query: 18 KAAPAVTVKTSLASIIDSVN---KNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXR- 73
K T T ++ + D + K+D +PV LG G+P
Sbjct: 6 KFGQKFTQPTGISQLXDDLGDALKSD-QPVNXLGGGNPAKIDAVNELFLETYKALGNDND 64
Query: 74 SGKFNCYA----TNSGIPPARRAIAD----YLSRDLPYKLSADDVYVTLGCKQAVEVILS 125
+GK N A N P A D + +R + L+++++ +T G + A + +
Sbjct: 65 TGKANSSAIISXANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFN 124
Query: 126 VLARPGAN--------------VLLPRPGWPYYEGIAQRKQVEVRHFD-LLPERN----- 165
+ N +LLP P Y G + VE +HF +LP +
Sbjct: 125 LFGGAFVNEHSQDKESKSVDKSILLPLT--PEYIGYSDV-HVEGQHFAAVLPHIDEVTHD 181
Query: 166 -------WEVDLDAVE---ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215
+ VD +A+E AL + A+ P NP GNV T +AE+A++ +
Sbjct: 182 GEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIP 241
Query: 216 VVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
++ D YG F +I Y+ L ++ S+SK L PG R G +V +
Sbjct: 242 LIIDNAYG-XPFPNIIYSDAHLNWDNNTILCF-SLSKIGL-PGXRTGIIVAD 290
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
D+ VT G +Q + + ++ PG NVLL P Y G Q V +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
+P+ W+ + DA + + N NP GN T +EI E+ARK
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
+++ D+ Y L F + M + G ++ + I + G R G+L P
Sbjct: 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP 279
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
D+ VT G +Q + + ++ PG NVLL P Y G Q V +
Sbjct: 112 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 168
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
+P+ W+ + DA + + N NP GN T +EI E+ARK
Sbjct: 169 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 227
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
+++ D+ Y L F + M + G ++ + I + G R G+L P
Sbjct: 228 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP 281
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN--V 134
N Y ++ R A + R +L +++ TLG ++ + S + N +
Sbjct: 52 LNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTI 111
Query: 135 LLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPC 193
P P + YEG A+ + + L E ++ L+ E +VI+N P NP
Sbjct: 112 AYPNPFYQIYEGAAKFIKAKSLLXPLTKENDFTPSLNEKEL----QEVDLVILNSPNNPT 167
Query: 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM---GLFG--SIVPVITLG 248
G + L ++A K +++ DE Y + + P + + L G + V+ +
Sbjct: 168 GRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVLVIH 227
Query: 249 SISKRWLVPGWRFGWLV 265
S+SKR PG R G++
Sbjct: 228 SLSKRSSAPGLRSGFIA 244
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
D+ VT G +Q + + ++ PG NVLL P Y G Q V +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
+P+ W+ + DA + + N NP GN T +EI E+ARK
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
+++ D+ Y L F + M + G ++ + I + G R G+L P
Sbjct: 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP 279
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWE 167
+V + G + + + ARPGA V P PG+ Y AQ +E F +P R ++
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLE---FVGVPLRADFT 143
Query: 168 VDLDA-VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGH 224
+D A + A A+ A + + P NP GN+F + I A+ R +VV DE Y
Sbjct: 144 LDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQP 203
Query: 225 LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
S + + FG++ + ++SK L G R G+ V DP + Q
Sbjct: 204 FAQESW-XSRLTDFGNL---LVXRTVSKLGLA-GIRLGY-VAGDPQWLEQ 247
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198
PG+ Y + E+R + L W++ +EAL + + + P NP G +
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPE 164
Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258
LQ IA+ + L + ++ DE + + P + L S++K + +PG
Sbjct: 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPA--LKDNPHIWVLRSLTKFYAIPG 222
Query: 259 WRFGWLVTND 268
R G+LV +D
Sbjct: 223 LRLGYLVNSD 232
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-YYEGIA-QR 150
I ++ + + + + + + G A+ + + +VL+ P +P ++E +
Sbjct: 68 ICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNN 127
Query: 151 KQVEVRHFDLLPERN--WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
+Q+ V L ++N + +D + +E + ++ +P NP G V+ L ++ +
Sbjct: 128 RQLCV---SPLQKQNDTYAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLGSL 184
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMG 236
K V+VVADE++ + + +TP
Sbjct: 185 CTKYNVIVVADEIHSDIIYADHTHTPFA 212
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 90 RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
R +A Y+++ ++ D+++ G + ++ +L PG L +P + + +A+
Sbjct: 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 150 RKQVEVRHFDLLPERNWEVDLD-AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
E + ++ +D+D A+E + K + + P NP G+V + ++ I +
Sbjct: 135 GTHTEF--IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
A + V+ DE Y F P L ++ ++S + G R G+ V N
Sbjct: 193 APGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVAN 246
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 22/249 (8%)
Query: 33 IDSVNKNDPRPVVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARR 91
++ + K+ ++ LG GD T P T G + Y G R+
Sbjct: 61 LEHIEKHPNVQLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEG-YRGYGLEQGNKTLRK 119
Query: 92 AIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----I 147
AIA+ RDL K +++V+V+ G + + L +L + + P +P Y I
Sbjct: 120 AIAETFYRDLHVK--SNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAYIDSSVII 176
Query: 148 AQ--------RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
Q +K V + P ++ DL A+ + T + +P NP G V +
Sbjct: 177 GQTGHFHEKTKKYQNVVYMPCGPNNSFFPDL----AMTPR-TDVIFFCSPNNPTGYVASR 231
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259
L ++ + A+ +++ D Y P + + G+ I + S SK G
Sbjct: 232 KQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGV 291
Query: 260 RFGWLVTND 268
R GW + D
Sbjct: 292 RLGWSIIPD 300
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 21/204 (10%)
Query: 80 YATNSGIPPARRAIADYLSRDLPYKLSADDV---YVTLGCKQAVEVILSVLARPGANVLL 136
YA GI R + RD P +LS D++ VT + ++ + +LL
Sbjct: 84 YAPPQGIEELRDLWQQKMLRDNP-ELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILL 142
Query: 137 PRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALA--DKNTAAMVIINPGNPC 193
P W Y+ + R ++ + + + VEAL +K+ M++ P NP
Sbjct: 143 PEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPT 202
Query: 194 GNVFTYHHLQEIAEMARKL-----RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV---- 244
G T+ + I E + L +V+ V D+ Y L + + YT LF ++ +
Sbjct: 203 GYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV-YT-QSLFTALTNLHSNA 260
Query: 245 ---ITLGSISKRWLVPGWRFGWLV 265
I L +K + G+R G++
Sbjct: 261 ILPIRLDGATKEFFAWGFRVGFMT 284
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 92/241 (38%), Gaps = 23/241 (9%)
Query: 38 KNDPRPVVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADY 96
KN ++ LG GD T P + R G ++ Y G R A+A
Sbjct: 65 KNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREG-YSGYGAEQGQGALREAVAST 123
Query: 97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEV 155
+AD+++++ G K + I + ++P V + P +P Y + +
Sbjct: 124 FYGHA--GRAADEIFISDGSKCDIARIQMMFGSKP--TVAVQDPSYPVYVDTSVMMGMTG 179
Query: 156 RH----FDLL------PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
H FD + P+ ++ DL K T + +P NP G T L E+
Sbjct: 180 DHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTEL 234
Query: 206 AEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264
ARK ++V D Y +++ P T + G+ I S SK G R GW
Sbjct: 235 VNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWT 294
Query: 265 V 265
V
Sbjct: 295 V 295
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 109 DVYVTLGCKQAVEVI-----LSVLARPGANVLLPRPGWPYYEGIAQRKQVEVR----HFD 159
D++ G A+ I +S L + G V + P + Y I + Q +++ H D
Sbjct: 166 DLFAVEGGTAAMAYIFESLRISGLLKAGDKVAIGMPVFTPYIEIPELAQYDLKEVPIHAD 225
Query: 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVV 217
P+ W+ ++ L D + +NP NP L + + + R ++++
Sbjct: 226 --PDNGWQYSDAELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLIL 283
Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITL--GSISKRWLVPGWRFGWLVTNDPN 270
D+VYG TF LF S+ P TL S SK + GWR G + + N
Sbjct: 284 TDDVYG--TFAD---EFQSLF-SVCPRNTLLVYSFSKYFGATGWRLGVIAAHKDN 332
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVVAD 219
P NW+ ++ L D +NP NP L+ + ++ + R +M++ D
Sbjct: 227 PALNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTD 286
Query: 220 EVYGHLTFGSIPYTPMGLFGSIVPVITL--GSISKRWLVPGWRFGWLVTNDPN 270
+VYG G LF +I P TL S SK + GWR G + + N
Sbjct: 287 DVYGTFADGF-----QSLF-AICPANTLLVYSFSKYFGATGWRLGVVAAHKEN 333
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 78 NCYATNSGIPPARRAIADYLSRD-LPYKLSADDVYV--TLGCKQAVEVILSVLARPGANV 134
YA SG P ++A+ + + D L + +A V T +QA+E L+ +A P V
Sbjct: 63 KTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALE--LARMANPDLRV 120
Query: 135 LLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVIINP--GN 191
+ P WP + I + V+ + VD + ++A LA MV+++ N
Sbjct: 121 FVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHN 180
Query: 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG--LFGSIVP-VITLG 248
P G T EIA + K + + D Y G + G L S +P V+
Sbjct: 181 PTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDG-LEEDAAGTRLIASRIPEVLIAA 239
Query: 249 SISKRWLVPGWRFGWLV 265
S SK + + R G L+
Sbjct: 240 SCSKNFGIYRERTGCLL 256
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 124 LSVLARPGANVLLPRPGW-PYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
L+ L + G V + P + PY E +AQ EV + P NW+ ++ L D
Sbjct: 187 LNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEV-AINADPSLNWQYPDSELDKLKDPA 245
Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVVADEVYGHLTFGSIPYTPMGLF 238
+NP NP L+ + + + R +M++ D+VYG TF LF
Sbjct: 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFAD---DFQSLF 300
Query: 239 GSIVPVITL--GSISKRWLVPGWRFGWLVTNDPN 270
+I P TL S SK + GWR G + + N
Sbjct: 301 -AICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 124 LSVLARPGANVLLPRPGW-PYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
L+ L + G V + P + PY E +AQ EV + P NW+ ++ L D
Sbjct: 187 LNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEV-AINADPSLNWQYPDSELDKLKDPA 245
Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVVADEVYGHLTFGSIPYTPMGLF 238
+NP NP L+ + + + R +M++ D+VYG TF LF
Sbjct: 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFAD---DFQSLF 300
Query: 239 GSIVPVITL--GSISKRWLVPGWRFGWLVTNDPN 270
+I P TL S SK + GWR G + + N
Sbjct: 301 -AICPENTLLVYSFSKYFGATGWRLGVVAAHQQN 333
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 26/178 (14%)
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW---PYYEGIAQRKQVEVRHFD 159
+++ A + +T G + + + A A +++P + ++ IA K +V+ D
Sbjct: 64 HQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGXKVTKVKXLD 123
Query: 160 LLPERNWEVDLDAVEAL--ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
NW D++ ++A A + + ++NP NP G + T + E ++ +
Sbjct: 124 -----NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTI-TPADVIEPWIASKPANTXFI 177
Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLG--------SISKRWLVPGWRFGWLVTN 267
DE Y F + P F SI P IT G + SK G R G+ V +
Sbjct: 178 VDEAYAE--FVNDPR-----FRSISPXITQGAENIILLKTFSKIHAXAGXRVGYAVAH 228
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 4/154 (2%)
Query: 73 RSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA 132
R G + Y G+P ++ + + + + A T+G Q V V R
Sbjct: 71 REGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSXQGCFVSFLVANRTHK 130
Query: 133 N----VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188
N L PG+ + + + FDL R ++ L +++ N
Sbjct: 131 NREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSN 190
Query: 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222
P NP T L+ I E+A K V+V+ D Y
Sbjct: 191 PNNPTWQCXTDEELRIIGELATKHDVIVIEDLAY 224
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + PGWP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVRRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + PGWP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + PGWP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ I +EVR + N +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLS 211
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ I +EVR + N +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLS 211
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ I +EVR + N +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLS 211
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ I +EVR + N +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLS 211
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ I +EVR + N +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 211
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVRRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGSCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGFCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGYCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGWCHNPTGIDPTLEQWQTLAQLS 201
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ I +EVR + N +D
Sbjct: 110 TPGGSGALRVGADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 211
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 110 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 169
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 211
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 141 WPYYEGIAQRKQVE-VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
WP ++G R V +RHF++ + +D + + ++ + +V+ NP NP G +
Sbjct: 97 WPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDC--VVLANPSNPTGQALSA 154
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL-FGSIVPVITLGSISKRWLVPG 258
L ++ + A KL + DE Y + + S + GL +G + S SK + + G
Sbjct: 155 GELDQLRQRAGKLLI----DETY--VDYSS--FRARGLAYGE--NELVFRSFSKSYGLAG 204
Query: 259 WRFGWL 264
R G L
Sbjct: 205 LRLGAL 210
>pdb|3GC6|A Chain A, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex.
pdb|3GC6|B Chain B, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex.
pdb|3GHH|A Chain A, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex.
pdb|3GHH|B Chain B, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex
Length = 247
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIA-EMARKLRVMVVADEVYGHLT 226
+ D +A + + + + P PCG + +E+A E A++ R+M + D + G+L
Sbjct: 56 ISKDPCKATKEDYNSLINLAPPTVPCGQQVFWSKTKELAHEYAKRRRLMTLEDTLLGYLA 115
Query: 227 FG 228
G
Sbjct: 116 DG 117
>pdb|3GH3|A Chain A, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex.
pdb|3GH3|B Chain B, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex.
pdb|3KOU|A Chain A, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex.
pdb|3KOU|B Chain B, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex
Length = 247
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIA-EMARKLRVMVVADEVYGHLT 226
+ D +A + + + + P PCG + +E+A E A++ R+M + D + G+L
Sbjct: 56 ISKDPCKATKEDYNSLINLAPPTVPCGQQVFWSKTKELAHEYAKRRRLMTLEDTLLGYLA 115
Query: 227 FG 228
G
Sbjct: 116 DG 117
>pdb|3P5S|A Chain A, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex
pdb|3P5S|B Chain B, Structural Insights Into The Catalytic Mechanism Of Cd38:
Evidence For A Conformationally Flexible Covalent
Enzyme-substrate Complex
Length = 278
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIA-EMARKLRVMVVADEVYGHLT 226
+ D +A + + + + P PCG + +E+A E A++ R+M + D + G+L
Sbjct: 87 ISKDPCKATKEDYNSLINLAPPTVPCGQQVFWSKTKELAHEYAKRRRLMTLEDTLLGYLA 146
Query: 227 FG 228
G
Sbjct: 147 DG 148
>pdb|2NXW|A Chain A, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2NXW|B Chain B, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2Q5J|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5J|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5L|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5L|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5O|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5O|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5Q|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
pdb|2Q5Q|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
Length = 565
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 166 WEVDLDAVEALADKNTAAMVIINPGNP----CGNVFTYHHLQEIAEMARKLRVMVVADEV 221
W VD DA+ A AD+ AAM + +P C V Y ++AE+A++L V VV
Sbjct: 201 WPVDRDALAACADEVLAAMR--SATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVT-TF 257
Query: 222 YGHLTFGSIPYTPMGLF 238
G P P+G +
Sbjct: 258 MGRGLLADAPTPPLGTY 274
>pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|B Chain B, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|C Chain C, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|D Chain D, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|E Chain E, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|F Chain F, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|G Chain G, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|H Chain H, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|I Chain I, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|J Chain J, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|K Chain K, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|L Chain L, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|M Chain M, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|N Chain N, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|O Chain O, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|P Chain P, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3KFE|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|E Chain E, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|F Chain F, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|G Chain G, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|H Chain H, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
Length = 521
Score = 30.8 bits (68), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHF----DLL 161
+ DD +GC +E V V L Y EGI+ R+Q+ VR F +++
Sbjct: 361 AVDDAVGVVGC--TIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVI 418
Query: 162 PERNWE-VDLDAVEALADKNTAAMVIINPGNPCG--NVFT 198
P E LDA+E L A + GN C NVFT
Sbjct: 419 PRTLAENAGLDAIEILVKVRAAHA---SNGNKCAGLNVFT 455
>pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|B Chain B, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|C Chain C, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|D Chain D, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|E Chain E, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|F Chain F, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|G Chain G, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|H Chain H, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|I Chain I, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|J Chain J, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|K Chain K, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|L Chain L, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|M Chain M, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|N Chain N, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|O Chain O, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|P Chain P, Mm-Cpn Rls Deltalid With Atp
pdb|3IZL|A Chain A, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|B Chain B, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|C Chain C, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|D Chain D, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|E Chain E, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|F Chain F, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|G Chain G, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|H Chain H, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|I Chain I, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|J Chain J, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|K Chain K, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|L Chain L, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|M Chain M, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|N Chain N, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|O Chain O, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|P Chain P, Mm-Cpn Rls Deltalid With Atp And Alfx
Length = 491
Score = 30.8 bits (68), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 133 NVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPERNWE-VDLDAVEALADKNTAAMVII 187
V L Y EGI+ R+Q+ VR F +++P E LDA+E L A
Sbjct: 380 EVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHA--- 436
Query: 188 NPGNPCG--NVFT 198
+ GN C NVFT
Sbjct: 437 SNGNKCAGLNVFT 449
>pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp
pdb|3IZI|B Chain B, Mm-Cpn Rls With Atp
pdb|3IZI|C Chain C, Mm-Cpn Rls With Atp
pdb|3IZI|D Chain D, Mm-Cpn Rls With Atp
pdb|3IZI|E Chain E, Mm-Cpn Rls With Atp
pdb|3IZI|F Chain F, Mm-Cpn Rls With Atp
pdb|3IZI|G Chain G, Mm-Cpn Rls With Atp
pdb|3IZI|H Chain H, Mm-Cpn Rls With Atp
pdb|3IZI|I Chain I, Mm-Cpn Rls With Atp
pdb|3IZI|J Chain J, Mm-Cpn Rls With Atp
pdb|3IZI|K Chain K, Mm-Cpn Rls With Atp
pdb|3IZI|L Chain L, Mm-Cpn Rls With Atp
pdb|3IZI|M Chain M, Mm-Cpn Rls With Atp
pdb|3IZI|N Chain N, Mm-Cpn Rls With Atp
pdb|3IZI|O Chain O, Mm-Cpn Rls With Atp
pdb|3IZI|P Chain P, Mm-Cpn Rls With Atp
pdb|3IZJ|A Chain A, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|B Chain B, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|C Chain C, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|D Chain D, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|E Chain E, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|F Chain F, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|G Chain G, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|H Chain H, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|I Chain I, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|J Chain J, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|K Chain K, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|L Chain L, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|M Chain M, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|N Chain N, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|O Chain O, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|P Chain P, Mm-Cpn Rls With Atp And Alfx
Length = 513
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 133 NVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPERNWE-VDLDAVEALADKNTAAMVII 187
V L Y EGI+ R+Q+ VR F +++P E LDA+E L A
Sbjct: 402 EVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHA--- 458
Query: 188 NPGNPCG--NVFT 198
+ GN C NVFT
Sbjct: 459 SNGNKCAGLNVFT 471
>pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|B Chain B, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|C Chain C, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|D Chain D, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|E Chain E, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|F Chain F, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|G Chain G, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|H Chain H, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|I Chain I, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|J Chain J, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|K Chain K, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|L Chain L, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|M Chain M, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|N Chain N, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|O Chain O, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|P Chain P, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
Length = 491
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 133 NVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPERNWE-VDLDAVEALADKNTAAMVII 187
V L Y EGI+ R+Q+ VR F +++P E LDA+E L A
Sbjct: 380 EVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHA--- 436
Query: 188 NPGNPCG--NVFT 198
+ GN C NVFT
Sbjct: 437 SNGNKCAGLNVFT 449
>pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUV|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUW|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
Length = 543
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHF----DLL 161
+ DD +GC +E V V L Y EGI+ R+Q+ VR F +++
Sbjct: 383 AVDDAVGVVGC--TIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVI 440
Query: 162 PERNWE-VDLDAVEALADKNTAAMVIINPGNPCG--NVFT 198
P E LDA+E L A + GN C NVFT
Sbjct: 441 PRTLAENAGLDAIEILVKVRAAHA---SNGNKCAGLNVFT 477
>pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|B Chain B, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|C Chain C, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|D Chain D, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|E Chain E, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|F Chain F, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|G Chain G, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|H Chain H, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|I Chain I, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|J Chain J, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|K Chain K, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|L Chain L, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|M Chain M, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|N Chain N, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|O Chain O, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|P Chain P, Atomic Model Of Mm-Cpn In The Closed State
pdb|3KFB|A Chain A, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|B Chain B, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|C Chain C, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|D Chain D, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|E Chain E, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|F Chain F, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|G Chain G, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|H Chain H, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3RUQ|A Chain A, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|B Chain B, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|C Chain C, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|D Chain D, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
Length = 543
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHF----DLL 161
+ DD +GC +E V V L Y EGI+ R+Q+ VR F +++
Sbjct: 383 AVDDAVGVVGC--TIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVI 440
Query: 162 PERNWE-VDLDAVEALADKNTAAMVIINPGNPCG--NVFT 198
P E LDA+E L A + GN C NVFT
Sbjct: 441 PRTLAENAGLDAIEILVKVRAAHA---SNGNKCAGLNVFT 477
>pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp
pdb|3IZH|B Chain B, Mm-Cpn D386a With Atp
pdb|3IZH|C Chain C, Mm-Cpn D386a With Atp
pdb|3IZH|D Chain D, Mm-Cpn D386a With Atp
pdb|3IZH|E Chain E, Mm-Cpn D386a With Atp
pdb|3IZH|F Chain F, Mm-Cpn D386a With Atp
pdb|3IZH|G Chain G, Mm-Cpn D386a With Atp
pdb|3IZH|H Chain H, Mm-Cpn D386a With Atp
pdb|3IZH|I Chain I, Mm-Cpn D386a With Atp
pdb|3IZH|J Chain J, Mm-Cpn D386a With Atp
pdb|3IZH|K Chain K, Mm-Cpn D386a With Atp
pdb|3IZH|L Chain L, Mm-Cpn D386a With Atp
pdb|3IZH|M Chain M, Mm-Cpn D386a With Atp
pdb|3IZH|N Chain N, Mm-Cpn D386a With Atp
pdb|3IZH|O Chain O, Mm-Cpn D386a With Atp
pdb|3IZH|P Chain P, Mm-Cpn D386a With Atp
pdb|3IZM|A Chain A, Mm-Cpn Wildtype With Atp
pdb|3IZM|B Chain B, Mm-Cpn Wildtype With Atp
pdb|3IZM|C Chain C, Mm-Cpn Wildtype With Atp
pdb|3IZM|D Chain D, Mm-Cpn Wildtype With Atp
pdb|3IZM|E Chain E, Mm-Cpn Wildtype With Atp
pdb|3IZM|F Chain F, Mm-Cpn Wildtype With Atp
pdb|3IZM|G Chain G, Mm-Cpn Wildtype With Atp
pdb|3IZM|H Chain H, Mm-Cpn Wildtype With Atp
pdb|3IZM|I Chain I, Mm-Cpn Wildtype With Atp
pdb|3IZM|J Chain J, Mm-Cpn Wildtype With Atp
pdb|3IZM|K Chain K, Mm-Cpn Wildtype With Atp
pdb|3IZM|L Chain L, Mm-Cpn Wildtype With Atp
pdb|3IZM|M Chain M, Mm-Cpn Wildtype With Atp
pdb|3IZM|N Chain N, Mm-Cpn Wildtype With Atp
pdb|3IZM|O Chain O, Mm-Cpn Wildtype With Atp
pdb|3IZM|P Chain P, Mm-Cpn Wildtype With Atp
Length = 513
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHF----DLL 161
+ DD +GC +E V V L Y EGI+ R+Q+ VR F +++
Sbjct: 377 AVDDAVGVVGC--TIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVI 434
Query: 162 PERNWE-VDLDAVEALADKNTAAMVIINPGNPCG--NVFT 198
P E LDA+E L A + GN C NVFT
Sbjct: 435 PRTLAENAGLDAIEILVKVRAAHA---SNGNKCAGLNVFT 471
>pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp
pdb|3IZN|B Chain B, Mm-Cpn Deltalid With Atp
pdb|3IZN|C Chain C, Mm-Cpn Deltalid With Atp
pdb|3IZN|D Chain D, Mm-Cpn Deltalid With Atp
pdb|3IZN|E Chain E, Mm-Cpn Deltalid With Atp
pdb|3IZN|F Chain F, Mm-Cpn Deltalid With Atp
pdb|3IZN|G Chain G, Mm-Cpn Deltalid With Atp
pdb|3IZN|H Chain H, Mm-Cpn Deltalid With Atp
pdb|3IZN|I Chain I, Mm-Cpn Deltalid With Atp
pdb|3IZN|J Chain J, Mm-Cpn Deltalid With Atp
pdb|3IZN|K Chain K, Mm-Cpn Deltalid With Atp
pdb|3IZN|L Chain L, Mm-Cpn Deltalid With Atp
pdb|3IZN|M Chain M, Mm-Cpn Deltalid With Atp
pdb|3IZN|N Chain N, Mm-Cpn Deltalid With Atp
pdb|3IZN|O Chain O, Mm-Cpn Deltalid With Atp
pdb|3IZN|P Chain P, Mm-Cpn Deltalid With Atp
pdb|3J03|A Chain A, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|B Chain B, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|C Chain C, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|D Chain D, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|E Chain E, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|F Chain F, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|G Chain G, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|H Chain H, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|I Chain I, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|J Chain J, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|K Chain K, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|L Chain L, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|M Chain M, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|N Chain N, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|O Chain O, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|P Chain P, Lidless Mm-Cpn In The Closed State With AtpALFX
Length = 491
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 133 NVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPERNWE-VDLDAVEALADKNTAAMVII 187
V L Y EGI+ R+Q+ VR F +++P E LDA+E L A
Sbjct: 380 EVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHA--- 436
Query: 188 NPGNPCG--NVFT 198
+ GN C NVFT
Sbjct: 437 SNGNKCAGLNVFT 449
>pdb|3MRU|A Chain A, Crystal Structure Of Aminoacylhistidine Dipeptidase From
Vibrio Alginolyticus
pdb|3MRU|B Chain B, Crystal Structure Of Aminoacylhistidine Dipeptidase From
Vibrio Alginolyticus
Length = 490
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVR-HFDLLPERNWEVDLD 171
A E V P NV + +P P G+ +K V ++ H D++P++N + D D
Sbjct: 44 ATEQGFDVRRDPTGNVFIKKPATP---GMENKKGVVLQAHIDMVPQKNEDTDHD 94
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G N G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNATGIDPTLEQWQTLAQLS 201
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G P G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLS 201
>pdb|3IKM|A Chain A, Crystal Structure Of Human Mitochondrial Dna Polymerase
Holoenzyme
pdb|3IKM|D Chain D, Crystal Structure Of Human Mitochondrial Dna Polymerase
Holoenzyme
Length = 1172
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 232 YTPMGLFGSIVP-VITLGSISKRWLVPGW 259
Y GL+G+I+P V+T G+I++R + P W
Sbjct: 764 YDEEGLYGAILPQVVTAGTITRRAVEPTW 792
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G P G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLS 201
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G P G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLS 201
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G P G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLS 201
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P WP ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G P G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLAQLS 201
>pdb|2W8J|A Chain A, Spt With Plp-Ser
pdb|2XBN|A Chain A, Inhibition Of The Plp-Dependent Enzyme Serine
Palmitoyltransferase By Cycloserine: Evidence For A
Novel Decarboxylative Mechanism Of Inactivation
Length = 427
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
I+S LA G V+L Q+ E+ F N DLD K A
Sbjct: 140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRF----RHNSVEDLDKRLGRLPKEPA 195
Query: 183 AMVIINPG-NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF---GSIPYTPMGLF 238
+V++ + G++ L+E+ +A+K MV+ DE + F G Y GL
Sbjct: 196 KLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLE 252
Query: 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270
G I V+ G+ SK G G++V+N P
Sbjct: 253 GQIDFVV--GTFSKSVGTVG---GFVVSNHPK 279
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134
A+ R + + LSA V VT G K I +V AR GANV
Sbjct: 28 AEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANV 68
>pdb|2W8W|A Chain A, N100y Spt With Plp-Ser
Length = 427
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
I+S LA G V+L Q+ E+ F N DLD K A
Sbjct: 140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRF----RHNSVEDLDKRLGRLPKEPA 195
Query: 183 AMVIINPG-NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF---GSIPYTPMGLF 238
+V++ + G++ L+E+ +A+K MV+ DE + F G Y GL
Sbjct: 196 KLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLE 252
Query: 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270
G I V+ G+ SK G G++V+N P
Sbjct: 253 GQIDFVV--GTFSKSVGTVG---GFVVSNHPK 279
>pdb|3MC6|C Chain C, Crystal Structure Of Scdpl1
Length = 497
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212
+++RH +L P ++VDL V+ +KNT +V P P G ++ + ++A+K
Sbjct: 180 MKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHG---IADDIEGLGKIAQKY 235
Query: 213 RVMVVADEVYG 223
++ + D G
Sbjct: 236 KLPLHVDSCLG 246
>pdb|3MC6|A Chain A, Crystal Structure Of Scdpl1
Length = 497
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212
+++RH +L P ++VDL V+ +KNT +V P P G ++ + ++A+K
Sbjct: 180 MKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHG---IADDIEGLGKIAQKY 235
Query: 213 RVMVVADEVYG 223
++ + D G
Sbjct: 236 KLPLHVDSCLG 246
>pdb|2JGT|A Chain A, Low Resolution Structure Of Spt
pdb|2JGT|B Chain B, Low Resolution Structure Of Spt
Length = 422
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
I+S LA G V+L Q+ E+ F N DLD K A
Sbjct: 141 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRF----RHNSVEDLDKRLGRLPKEPA 196
Query: 183 AMVIINPG-NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF---GSIPYTPMGLF 238
+V++ + G++ L+E+ +A+K MV+ DE + F G Y GL
Sbjct: 197 KLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLE 253
Query: 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270
G I V+ G+ SK G G++V+N P
Sbjct: 254 GQIDFVV--GTFSKSVGTVG---GFVVSNHPK 280
>pdb|3RUY|A Chain A, Crystal Structure Of The Ornithine-Oxo Acid Transaminase
Rocd From Bacillus Anthracis
pdb|3RUY|B Chain B, Crystal Structure Of The Ornithine-Oxo Acid Transaminase
Rocd From Bacillus Anthracis
Length = 392
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 169 DLDAVEALADKNTAAMVIINP--GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL 225
DL+A++A NTAA I+ P G N+ L+E E+ +K V+ VADE+ L
Sbjct: 171 DLEALKAAITPNTAAF-ILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGL 228
>pdb|3LVJ|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVJ|B Chain B, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVK|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 2)
pdb|3LVL|B Chain B, Crystal Structure Of E.Coli Iscs-Iscu Complex
pdb|3LVM|A Chain A, Crystal Structure Of E.Coli Iscs
pdb|3LVM|B Chain B, Crystal Structure Of E.Coli Iscs
Length = 423
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 151 KQVEVRHFD---LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207
+Q+E F+ L P+RN +DL +EA +T + I++ N G V Q+IA
Sbjct: 131 RQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV------QDIAA 184
Query: 208 MARKLRVMVVADEVYGHLTFGSIP 231
+ R + V + G +P
Sbjct: 185 IGEMCRARGIIYHVDATQSVGKLP 208
>pdb|1P3W|B Chain B, X-Ray Crystal Structure Of E. Coli Iscs
pdb|1P3W|A Chain A, X-Ray Crystal Structure Of E. Coli Iscs
Length = 404
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 151 KQVEVRHFD---LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207
+Q+E F+ L P+RN +DL +EA +T + I++ N G V Q+IA
Sbjct: 112 RQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV------QDIAA 165
Query: 208 MARKLRVMVVADEVYGHLTFGSIP 231
+ R + V + G +P
Sbjct: 166 IGEMCRARGIIYHVDATQSVGKLP 189
>pdb|3L5O|A Chain A, Crystal Structure Of Protein With Unknown Function From
Duf364 Family (Zp_00559375.1) From Desulfitobacterium
Hafniense Dcb-2 At 2.01 A Resolution
pdb|3L5O|B Chain B, Crystal Structure Of Protein With Unknown Function From
Duf364 Family (Zp_00559375.1) From Desulfitobacterium
Hafniense Dcb-2 At 2.01 A Resolution
Length = 270
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 179 KNTAAMVIINPGNPCGNVFTYHHLQEIA-----EMARKLRVMVVADEV 221
+N + ++ PG P V H LQE++ + AR R++ A++V
Sbjct: 210 RNARRITLVGPGTPLAPVLFEHGLQELSGFXVKDNARAFRIVAGAEKV 257
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 27.7 bits (60), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 113 TLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
T G A+ V LA+ + V + P P ++ + +EVR + N +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSHPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 171 DAVEALADKNTAAMVIINPG---NPCGNVFTYHHLQEIAEMA 209
DA+ ++ A V++ G NP G T Q +A+++
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
>pdb|2W8T|A Chain A, Spt With Plp, N100c
Length = 427
Score = 27.3 bits (59), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 16/152 (10%)
Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
I+S LA G V+L Q+ E+ F N DLD K A
Sbjct: 140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRF----RHNSVEDLDKRLGRLPKEPA 195
Query: 183 AMVIINPG-NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF---GSIPYTPMGLF 238
+V++ + G++ L+E+ +A+K MV+ DE + F G Y GL
Sbjct: 196 KLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLE 252
Query: 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270
G I V+ S S G G++V+N P
Sbjct: 253 GQIDFVVGTFSXS-----VGTVGGFVVSNHPK 279
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,365,902
Number of Sequences: 62578
Number of extensions: 374907
Number of successful extensions: 1009
Number of sequences better than 100.0: 160
Number of HSP's better than 100.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 832
Number of HSP's gapped (non-prelim): 161
length of query: 301
length of database: 14,973,337
effective HSP length: 98
effective length of query: 203
effective length of database: 8,840,693
effective search space: 1794660679
effective search space used: 1794660679
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)