Query 022213
Match_columns 301
No_of_seqs 172 out of 1862
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 15:48:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 2.4E-42 8.1E-47 318.0 25.6 289 7-300 22-310 (427)
2 1b5p_A Protein (aspartate amin 100.0 1.5E-41 5E-46 308.5 28.4 270 13-299 4-274 (385)
3 3k7y_A Aspartate aminotransfer 100.0 4.9E-41 1.7E-45 306.8 24.4 274 15-299 6-296 (405)
4 1bw0_A TAT, protein (tyrosine 100.0 1.4E-39 4.8E-44 298.1 26.8 287 8-300 3-299 (416)
5 3aow_A Putative uncharacterize 100.0 1E-39 3.5E-44 302.3 23.6 273 6-300 47-329 (448)
6 3fvs_A Kynurenine--oxoglutarat 100.0 1.6E-39 5.5E-44 298.1 23.4 268 13-299 6-287 (422)
7 3ele_A Amino transferase; RER0 100.0 1E-38 3.5E-43 290.6 27.4 278 13-299 4-295 (398)
8 4f4e_A Aromatic-amino-acid ami 100.0 4.1E-39 1.4E-43 295.7 22.2 277 12-299 23-316 (420)
9 3e2y_A Kynurenine-oxoglutarate 100.0 5.1E-39 1.7E-43 293.6 22.1 266 15-299 3-280 (410)
10 1gd9_A Aspartate aminotransfer 100.0 3.9E-38 1.3E-42 285.9 26.8 267 14-299 4-273 (389)
11 3jtx_A Aminotransferase; NP_28 100.0 1.8E-38 6.1E-43 288.7 23.9 269 15-299 4-285 (396)
12 3b46_A Aminotransferase BNA3; 100.0 6.3E-39 2.1E-43 296.9 20.9 248 40-299 55-315 (447)
13 3h14_A Aminotransferase, class 100.0 3.1E-38 1.1E-42 286.9 24.8 263 16-299 7-270 (391)
14 3tcm_A Alanine aminotransferas 100.0 2.7E-38 9.4E-43 296.5 25.1 271 25-300 43-361 (500)
15 2x5d_A Probable aminotransfera 100.0 2.7E-38 9.3E-43 289.4 24.4 272 14-299 11-285 (412)
16 1j32_A Aspartate aminotransfer 100.0 3.5E-38 1.2E-42 286.2 24.7 271 14-299 4-277 (388)
17 1o4s_A Aspartate aminotransfer 100.0 8.1E-38 2.8E-42 284.3 25.7 273 11-299 12-286 (389)
18 7aat_A Aspartate aminotransfer 100.0 3E-38 1E-42 287.9 22.6 278 17-299 7-297 (401)
19 3ihj_A Alanine aminotransferas 100.0 4.1E-38 1.4E-42 295.0 23.9 253 43-300 64-360 (498)
20 2r2n_A Kynurenine/alpha-aminoa 100.0 1.2E-37 4E-42 286.5 23.6 268 9-300 3-303 (425)
21 3fsl_A Aromatic-amino-acid ami 100.0 1.1E-37 3.6E-42 283.7 22.1 246 17-268 5-263 (397)
22 1xi9_A Putative transaminase; 100.0 1.2E-37 4.1E-42 284.6 22.4 282 7-299 6-290 (406)
23 2dou_A Probable N-succinyldiam 100.0 5.5E-38 1.9E-42 283.8 19.4 246 40-299 23-270 (376)
24 2o0r_A RV0858C (N-succinyldiam 100.0 5.3E-37 1.8E-41 280.7 26.1 266 14-299 4-273 (411)
25 1u08_A Hypothetical aminotrans 100.0 6.6E-37 2.2E-41 277.7 25.9 244 42-299 30-276 (386)
26 2o1b_A Aminotransferase, class 100.0 9.5E-38 3.3E-42 285.3 19.5 268 14-299 23-293 (404)
27 3t18_A Aminotransferase class 100.0 7.8E-38 2.7E-42 286.3 18.8 278 14-299 9-308 (413)
28 3g0t_A Putative aminotransfera 100.0 1.6E-37 5.3E-42 286.1 19.7 244 18-267 21-275 (437)
29 3nra_A Aspartate aminotransfer 100.0 5.6E-37 1.9E-41 279.6 23.1 247 43-300 40-294 (407)
30 3rq1_A Aminotransferase class 100.0 1.8E-37 6E-42 284.4 18.8 283 9-299 5-309 (418)
31 3ezs_A Aminotransferase ASPB; 100.0 1.7E-37 5.9E-42 280.3 18.4 260 20-299 4-271 (376)
32 2zc0_A Alanine glyoxylate tran 100.0 3.4E-36 1.2E-40 274.7 26.7 274 9-299 3-286 (407)
33 1yiz_A Kynurenine aminotransfe 100.0 1.4E-36 4.7E-41 279.4 24.1 246 42-299 37-295 (429)
34 3fdb_A Beta C-S lyase, putativ 100.0 3E-37 1E-41 278.7 19.0 242 40-299 21-264 (377)
35 1vp4_A Aminotransferase, putat 100.0 5E-37 1.7E-41 282.3 19.7 267 12-299 20-299 (425)
36 2z61_A Probable aspartate amin 100.0 1.1E-35 3.7E-40 268.2 27.8 258 14-299 3-262 (370)
37 3qgu_A LL-diaminopimelate amin 100.0 7.4E-36 2.5E-40 276.2 26.8 274 12-299 38-330 (449)
38 3dzz_A Putative pyridoxal 5'-p 100.0 2.5E-36 8.5E-41 273.8 23.1 246 40-299 25-276 (391)
39 3kax_A Aminotransferase, class 100.0 1.3E-36 4.3E-41 275.0 20.3 246 40-299 22-272 (383)
40 2gb3_A Aspartate aminotransfer 100.0 5E-36 1.7E-40 274.2 22.6 268 13-299 16-284 (409)
41 1c7n_A Cystalysin; transferase 100.0 2.5E-36 8.4E-41 275.0 20.5 244 42-299 31-280 (399)
42 1ajs_A Aspartate aminotransfer 100.0 2E-36 6.7E-41 276.9 19.9 277 16-299 8-305 (412)
43 4dq6_A Putative pyridoxal phos 100.0 7.6E-36 2.6E-40 270.6 21.9 244 41-299 31-280 (391)
44 3ei9_A LL-diaminopimelate amin 100.0 1.5E-35 5.1E-40 272.8 24.1 272 15-299 28-318 (432)
45 4h51_A Aspartate aminotransfer 100.0 3E-36 1E-40 275.6 19.1 272 17-299 24-312 (420)
46 1yaa_A Aspartate aminotransfer 100.0 2.2E-36 7.7E-41 276.6 18.1 278 15-299 6-305 (412)
47 3meb_A Aspartate aminotransfer 100.0 4.7E-36 1.6E-40 277.7 20.1 276 15-300 26-333 (448)
48 4eu1_A Mitochondrial aspartate 100.0 1.4E-36 4.8E-41 277.8 16.3 275 14-299 17-305 (409)
49 1v2d_A Glutamine aminotransfer 100.0 2.1E-35 7.3E-40 267.3 23.8 256 14-299 4-262 (381)
50 2q7w_A Aspartate aminotransfer 100.0 1.8E-36 6E-41 275.5 16.5 276 17-299 5-293 (396)
51 1d2f_A MALY protein; aminotran 100.0 1.5E-35 5.1E-40 269.1 21.1 242 42-299 28-276 (390)
52 2x5f_A Aspartate_tyrosine_phen 100.0 1.4E-36 4.9E-41 279.5 13.0 248 41-299 46-318 (430)
53 3ffh_A Histidinol-phosphate am 100.0 6E-35 2E-39 262.6 23.2 234 40-299 30-263 (363)
54 2zyj_A Alpha-aminodipate amino 100.0 7.3E-36 2.5E-40 271.9 17.2 264 9-299 6-277 (397)
55 3ly1_A Putative histidinol-pho 100.0 2E-35 6.8E-40 264.7 19.0 237 38-299 12-251 (354)
56 2ay1_A Aroat, aromatic amino a 100.0 1.1E-35 3.9E-40 270.1 17.6 274 16-299 4-290 (394)
57 3asa_A LL-diaminopimelate amin 100.0 1.4E-34 4.6E-39 263.9 24.1 241 15-268 5-252 (400)
58 1iay_A ACC synthase 2, 1-amino 100.0 5.2E-35 1.8E-39 268.9 20.3 245 42-299 36-307 (428)
59 3l8a_A METC, putative aminotra 100.0 6E-35 2E-39 268.1 19.9 245 41-299 60-310 (421)
60 3get_A Histidinol-phosphate am 100.0 4.5E-35 1.5E-39 263.6 18.3 234 41-299 29-265 (365)
61 3piu_A 1-aminocyclopropane-1-c 100.0 7.4E-35 2.5E-39 268.5 18.4 246 41-299 37-312 (435)
62 3euc_A Histidinol-phosphate am 100.0 6.5E-34 2.2E-38 256.1 21.2 232 41-299 29-264 (367)
63 2zy4_A L-aspartate beta-decarb 100.0 2.2E-34 7.4E-39 272.3 18.5 235 23-269 81-332 (546)
64 3ppl_A Aspartate aminotransfer 100.0 3.9E-35 1.3E-39 269.7 12.8 241 41-300 32-300 (427)
65 1lc5_A COBD, L-threonine-O-3-p 100.0 1.5E-33 5.1E-38 253.7 22.2 233 40-299 22-255 (364)
66 3b1d_A Betac-S lyase; HET: PLP 100.0 6.4E-37 2.2E-41 278.5 0.0 244 43-300 32-281 (392)
67 1fg7_A Histidinol phosphate am 100.0 9.9E-34 3.4E-38 254.5 20.8 222 42-299 29-252 (356)
68 3ftb_A Histidinol-phosphate am 100.0 1.7E-33 5.8E-38 252.6 22.3 231 40-299 24-254 (361)
69 3d6k_A Putative aminotransfera 100.0 1.4E-34 4.9E-39 265.7 14.6 239 43-300 33-298 (422)
70 3if2_A Aminotransferase; YP_26 100.0 5.5E-34 1.9E-38 263.2 17.9 267 17-299 9-315 (444)
71 3g7q_A Valine-pyruvate aminotr 100.0 3.4E-34 1.2E-38 262.2 14.9 260 21-299 13-289 (417)
72 3ez1_A Aminotransferase MOCR f 100.0 3.7E-34 1.3E-38 262.7 12.7 240 41-299 24-292 (423)
73 3cq5_A Histidinol-phosphate am 100.0 2.1E-32 7.2E-37 246.7 23.8 234 44-299 32-269 (369)
74 3f6t_A Aspartate aminotransfer 100.0 3.7E-33 1.3E-37 263.5 17.5 215 43-269 104-330 (533)
75 3op7_A Aminotransferase class 100.0 7.9E-33 2.7E-37 249.8 18.5 215 67-299 47-262 (375)
76 3fkd_A L-threonine-O-3-phospha 100.0 2.1E-32 7.1E-37 244.9 18.5 222 40-299 13-235 (350)
77 3p1t_A Putative histidinol-pho 100.0 1.6E-31 5.5E-36 237.5 21.6 223 40-299 14-236 (337)
78 3hdo_A Histidinol-phosphate am 100.0 1.3E-31 4.4E-36 240.7 20.3 227 40-299 24-252 (360)
79 3bwn_A AT1G70560, L-tryptophan 100.0 2.1E-32 7.2E-37 249.0 10.0 226 40-300 20-259 (391)
80 1uu1_A Histidinol-phosphate am 100.0 2.5E-31 8.4E-36 236.7 16.4 222 42-299 19-240 (335)
81 2hox_A ALLIIN lyase 1; cystein 100.0 1.4E-31 4.7E-36 246.3 8.8 224 41-300 55-293 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 4.1E-29 1.4E-33 227.3 19.2 230 41-298 42-280 (398)
83 1e5e_A MGL, methionine gamma-l 100.0 1.8E-27 6.1E-32 217.3 21.3 217 44-299 20-252 (404)
84 1t3i_A Probable cysteine desul 100.0 1.7E-27 5.9E-32 217.5 16.4 211 42-285 27-254 (420)
85 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 3E-27 1E-31 212.5 16.5 205 41-268 6-224 (371)
86 1bs0_A Protein (8-amino-7-oxon 99.9 3.4E-26 1.2E-30 206.9 19.6 225 41-298 38-274 (384)
87 3tqx_A 2-amino-3-ketobutyrate 99.9 2E-26 6.8E-31 209.1 17.0 214 41-285 42-268 (399)
88 1vjo_A Alanine--glyoxylate ami 99.9 1.5E-26 5.1E-31 209.8 15.3 197 59-284 44-244 (393)
89 1eg5_A Aminotransferase; PLP-d 99.9 4.5E-26 1.6E-30 205.5 17.4 200 45-269 3-218 (384)
90 2po3_A 4-dehydrase; external a 99.9 1.5E-25 5.3E-30 205.6 20.8 212 39-287 11-226 (424)
91 1kmj_A Selenocysteine lyase; p 99.9 1.6E-26 5.5E-31 209.9 14.0 211 41-284 21-248 (406)
92 1elu_A L-cysteine/L-cystine C- 99.9 4.3E-26 1.5E-30 206.2 14.6 205 42-268 15-235 (390)
93 2eh6_A Acoat, acetylornithine 99.9 2.9E-26 9.9E-31 206.6 13.3 229 40-298 26-279 (375)
94 2dr1_A PH1308 protein, 386AA l 99.9 1.2E-25 4.2E-30 202.9 17.0 190 59-268 30-223 (386)
95 2rfv_A Methionine gamma-lyase; 99.9 3.3E-25 1.1E-29 201.8 19.5 217 45-299 23-253 (398)
96 2w8t_A SPT, serine palmitoyltr 99.9 6.2E-25 2.1E-29 201.8 20.5 205 40-268 62-277 (427)
97 3lvm_A Cysteine desulfurase; s 99.9 6.2E-25 2.1E-29 201.0 19.7 204 39-269 18-240 (423)
98 1fc4_A 2-amino-3-ketobutyrate 99.9 2.2E-25 7.7E-30 202.6 15.5 227 40-299 43-287 (401)
99 1b9h_A AHBA synthase, protein 99.9 7.1E-25 2.4E-29 198.6 17.9 190 57-269 8-203 (388)
100 2ez2_A Beta-tyrosinase, tyrosi 99.9 2.8E-25 9.6E-30 205.6 15.2 245 14-285 7-281 (456)
101 4adb_A Succinylornithine trans 99.9 1.4E-25 4.8E-30 204.2 13.0 230 39-299 36-291 (406)
102 3kki_A CAI-1 autoinducer synth 99.9 5.1E-25 1.7E-29 201.1 16.6 205 40-268 57-269 (409)
103 1ibj_A CBL, cystathionine beta 99.9 1.9E-25 6.4E-30 207.1 12.9 221 42-298 89-319 (464)
104 1sff_A 4-aminobutyrate aminotr 99.9 1.3E-25 4.5E-30 205.8 11.7 239 40-299 39-307 (426)
105 2aeu_A Hypothetical protein MJ 99.9 1.3E-24 4.5E-29 196.4 16.9 215 41-299 26-246 (374)
106 4eb5_A Probable cysteine desul 99.9 2.2E-24 7.5E-29 194.4 17.9 190 59-269 11-214 (382)
107 3f9t_A TDC, L-tyrosine decarbo 99.9 6.2E-24 2.1E-28 192.0 20.8 200 59-269 41-262 (397)
108 1svv_A Threonine aldolase; str 99.9 2.5E-24 8.5E-29 192.3 17.6 209 41-268 12-230 (359)
109 3a9z_A Selenocysteine lyase; P 99.9 3.2E-24 1.1E-28 196.9 18.6 201 42-269 17-261 (432)
110 2bwn_A 5-aminolevulinate synth 99.9 1E-24 3.5E-29 198.4 15.1 213 41-285 45-270 (401)
111 2z9v_A Aspartate aminotransfer 99.9 1.1E-24 3.9E-29 197.2 15.0 207 43-284 8-219 (392)
112 2huf_A Alanine glyoxylate amin 99.9 1.2E-24 4E-29 197.2 14.5 207 41-285 17-230 (393)
113 4hvk_A Probable cysteine desul 99.9 1.3E-23 4.5E-28 188.9 20.9 188 59-269 11-214 (382)
114 2c81_A Glutamine-2-deoxy-scyll 99.9 1.1E-23 3.7E-28 192.8 20.4 200 60-286 14-217 (418)
115 3cai_A Possible aminotransfera 99.9 2.7E-24 9.3E-29 195.7 16.0 200 43-267 26-240 (406)
116 1jg8_A L-ALLO-threonine aldola 99.9 6E-25 2.1E-29 195.9 11.2 214 41-286 2-227 (347)
117 2oga_A Transaminase; PLP-depen 99.9 2.4E-24 8.3E-29 196.1 15.2 206 42-286 30-239 (399)
118 2ord_A Acoat, acetylornithine 99.9 3.2E-24 1.1E-28 194.9 15.7 207 40-269 38-268 (397)
119 3ruy_A Ornithine aminotransfer 99.9 3.8E-24 1.3E-28 194.0 14.2 230 40-299 34-291 (392)
120 1vef_A Acetylornithine/acetyl- 99.9 2.3E-24 8E-29 195.6 12.5 237 40-298 43-292 (395)
121 3vax_A Putative uncharacterize 99.9 1.7E-23 5.7E-28 190.0 17.8 202 41-268 18-235 (400)
122 2eo5_A 419AA long hypothetical 99.9 7.6E-24 2.6E-28 194.1 15.5 219 40-268 40-297 (419)
123 3uwc_A Nucleotide-sugar aminot 99.9 1.5E-23 5.1E-28 188.8 17.1 205 41-286 5-213 (374)
124 1v72_A Aldolase; PLP-dependent 99.9 5.3E-24 1.8E-28 190.1 13.7 203 41-266 6-224 (356)
125 3acz_A Methionine gamma-lyase; 99.9 1.9E-23 6.7E-28 189.6 17.6 169 85-286 60-233 (389)
126 1mdo_A ARNB aminotransferase; 99.9 2.3E-23 7.8E-28 188.8 17.9 203 43-286 9-213 (393)
127 3i4j_A Aminotransferase, class 99.9 7.2E-24 2.5E-28 194.7 14.6 242 39-299 26-305 (430)
128 2ch1_A 3-hydroxykynurenine tra 99.9 8E-24 2.7E-28 191.9 14.4 188 58-268 27-220 (396)
129 1iug_A Putative aspartate amin 99.9 4.5E-24 1.5E-28 190.3 12.4 187 58-268 10-200 (352)
130 1m32_A 2-aminoethylphosphonate 99.9 6.2E-24 2.1E-28 190.1 12.6 199 43-268 4-208 (366)
131 3zrp_A Serine-pyruvate aminotr 99.9 6E-24 2.1E-28 191.5 12.3 189 58-268 11-204 (384)
132 3dr4_A Putative perosamine syn 99.9 4.1E-23 1.4E-27 187.2 17.7 208 41-286 21-231 (391)
133 3dxv_A Alpha-amino-epsilon-cap 99.9 2.4E-23 8.2E-28 191.7 16.2 238 39-298 40-307 (439)
134 1ax4_A Tryptophanase; tryptoph 99.9 6E-24 2.1E-28 197.1 11.9 210 41-267 33-279 (467)
135 1s0a_A Adenosylmethionine-8-am 99.9 5E-23 1.7E-27 189.0 17.3 223 40-284 41-298 (429)
136 3nyt_A Aminotransferase WBPE; 99.9 2.1E-23 7.1E-28 187.7 14.5 194 60-286 14-211 (367)
137 3ndn_A O-succinylhomoserine su 99.9 4.8E-23 1.6E-27 188.5 17.0 156 87-268 84-244 (414)
138 1pff_A Methionine gamma-lyase; 99.9 4.3E-23 1.5E-27 182.9 16.1 178 88-298 2-187 (331)
139 3qhx_A Cystathionine gamma-syn 99.9 4.8E-23 1.7E-27 187.2 16.5 180 85-297 67-252 (392)
140 2pb2_A Acetylornithine/succiny 99.9 3.4E-23 1.2E-27 189.9 15.5 210 39-268 54-285 (420)
141 3cog_A Cystathionine gamma-lya 99.9 4.7E-23 1.6E-27 188.0 15.7 185 79-298 63-254 (403)
142 1gc0_A Methionine gamma-lyase; 99.9 9E-23 3.1E-27 185.7 17.3 159 84-268 65-228 (398)
143 2cb1_A O-acetyl homoserine sul 99.9 1.5E-22 5.2E-27 185.1 18.7 183 57-269 31-219 (412)
144 1o69_A Aminotransferase; struc 99.9 2.8E-22 9.4E-27 182.2 20.1 192 62-287 12-210 (394)
145 1cs1_A CGS, protein (cystathio 99.9 7.7E-23 2.6E-27 185.3 16.2 181 84-297 52-238 (386)
146 3f0h_A Aminotransferase; RER07 99.9 1E-22 3.5E-27 183.3 16.9 208 43-284 19-229 (376)
147 2yrr_A Aminotransferase, class 99.9 1.3E-23 4.4E-28 187.2 10.0 188 58-268 9-201 (353)
148 1n8p_A Cystathionine gamma-lya 99.9 3.6E-23 1.2E-27 188.1 12.6 167 85-286 56-231 (393)
149 3isl_A Purine catabolism prote 99.9 1E-22 3.5E-27 185.7 15.2 172 86-284 46-221 (416)
150 3nnk_A Ureidoglycine-glyoxylat 99.9 8.6E-23 3E-27 185.8 14.5 197 58-285 22-224 (411)
151 3nx3_A Acoat, acetylornithine 99.9 2.2E-22 7.6E-27 182.7 17.0 232 39-299 33-288 (395)
152 3mad_A Sphingosine-1-phosphate 99.9 2.3E-22 7.8E-27 189.0 17.5 183 79-268 130-327 (514)
153 4ffc_A 4-aminobutyrate aminotr 99.9 8.9E-23 3E-27 188.9 14.5 242 40-299 62-333 (453)
154 3n5m_A Adenosylmethionine-8-am 99.9 2.8E-22 9.5E-27 185.4 16.9 224 39-283 46-307 (452)
155 1zod_A DGD, 2,2-dialkylglycine 99.9 1.2E-22 4.1E-27 186.6 14.1 240 40-299 41-313 (433)
156 3mc6_A Sphingosine-1-phosphate 99.9 5.6E-22 1.9E-26 185.5 18.5 204 59-268 75-295 (497)
157 2bkw_A Alanine-glyoxylate amin 99.9 8.4E-23 2.9E-27 184.2 12.4 202 42-268 4-216 (385)
158 3l44_A Glutamate-1-semialdehyd 99.9 8.8E-23 3E-27 187.7 12.5 237 39-299 52-312 (434)
159 2fnu_A Aminotransferase; prote 99.9 8.6E-22 2.9E-26 177.1 18.5 194 59-286 10-208 (375)
160 3ffr_A Phosphoserine aminotran 99.9 5.5E-22 1.9E-26 177.3 17.0 209 43-285 4-215 (362)
161 3frk_A QDTB; aminotransferase, 99.9 4.3E-22 1.5E-26 179.4 16.2 206 43-287 4-213 (373)
162 2dkj_A Serine hydroxymethyltra 99.9 8.9E-23 3E-27 185.6 11.7 212 42-286 23-251 (407)
163 3jzl_A Putative cystathionine 99.9 8.3E-22 2.8E-26 179.6 17.9 195 63-286 33-254 (409)
164 2fq6_A Cystathionine beta-lyas 99.9 1.6E-21 5.6E-26 178.3 19.6 157 86-268 84-247 (415)
165 3kgw_A Alanine-glyoxylate amin 99.9 1.6E-22 5.5E-27 182.7 12.6 197 58-284 32-233 (393)
166 4a6r_A Omega transaminase; tra 99.9 6.5E-22 2.2E-26 183.4 16.5 244 38-299 46-331 (459)
167 2dgk_A GAD-beta, GADB, glutama 99.9 5.1E-21 1.8E-25 177.0 22.2 199 60-269 54-278 (452)
168 3i16_A Aluminum resistance pro 99.9 1.4E-21 4.9E-26 178.7 18.2 178 79-285 69-270 (427)
169 3a8u_X Omega-amino acid--pyruv 99.9 4.3E-22 1.5E-26 183.9 14.2 226 40-284 48-312 (449)
170 3n0l_A Serine hydroxymethyltra 99.9 2.9E-22 9.8E-27 182.8 12.8 215 42-286 25-252 (417)
171 1z7d_A Ornithine aminotransfer 99.9 4.8E-22 1.6E-26 183.0 14.3 206 39-268 62-297 (433)
172 3ju7_A Putative PLP-dependent 99.9 9.4E-22 3.2E-26 177.8 16.0 200 56-287 10-217 (377)
173 2cy8_A D-phgat, D-phenylglycin 99.9 5.3E-22 1.8E-26 183.6 14.7 206 40-268 55-284 (453)
174 3hvy_A Cystathionine beta-lyas 99.9 1.4E-21 4.8E-26 178.8 17.2 195 62-286 47-271 (427)
175 3oks_A 4-aminobutyrate transam 99.9 3.8E-22 1.3E-26 184.6 13.6 242 40-299 59-335 (451)
176 2oat_A Ornithine aminotransfer 99.9 2.2E-21 7.4E-26 178.9 18.4 205 40-268 74-308 (439)
177 3gju_A Putative aminotransfera 99.9 2E-21 6.8E-26 180.2 17.8 245 39-299 48-337 (460)
178 1qz9_A Kynureninase; kynurenin 99.9 2.2E-21 7.7E-26 176.9 17.3 196 42-269 27-244 (416)
179 3ri6_A O-acetylhomoserine sulf 99.9 1.8E-21 6.2E-26 178.6 16.2 157 85-267 83-243 (430)
180 2oqx_A Tryptophanase; lyase, p 99.9 4.9E-22 1.7E-26 184.3 11.6 211 41-268 31-280 (467)
181 3ht4_A Aluminum resistance pro 99.9 6.5E-21 2.2E-25 175.0 18.8 180 89-286 66-260 (431)
182 3dod_A Adenosylmethionine-8-am 99.9 1.4E-21 4.9E-26 180.5 13.9 226 39-284 41-304 (448)
183 1qgn_A Protein (cystathionine 99.9 1.2E-20 4.1E-25 173.7 19.8 167 86-286 116-288 (445)
184 3pj0_A LMO0305 protein; struct 99.9 4.7E-22 1.6E-26 178.0 9.8 213 41-286 12-232 (359)
185 1wyu_B Glycine dehydrogenase s 99.9 6.5E-21 2.2E-25 177.4 17.6 204 43-268 67-286 (474)
186 2e7u_A Glutamate-1-semialdehyd 99.9 3E-21 1E-25 176.9 14.9 214 39-284 49-289 (424)
187 3k28_A Glutamate-1-semialdehyd 99.9 8.1E-22 2.8E-26 181.1 10.5 237 39-299 50-310 (429)
188 1w23_A Phosphoserine aminotran 99.9 4.4E-22 1.5E-26 178.1 7.8 194 42-268 2-210 (360)
189 3fq8_A Glutamate-1-semialdehyd 99.9 2.7E-21 9.2E-26 177.4 13.1 215 39-284 49-290 (427)
190 2epj_A Glutamate-1-semialdehyd 99.9 2.9E-21 1E-25 177.6 13.1 206 39-267 53-285 (434)
191 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2.1E-20 7.3E-25 172.0 18.8 195 41-268 30-234 (437)
192 3tfu_A Adenosylmethionine-8-am 99.9 2.4E-21 8.1E-26 179.5 12.2 226 40-283 71-326 (457)
193 3e9k_A Kynureninase; kynurenin 99.9 1.5E-20 5E-25 174.5 17.4 206 42-268 66-292 (465)
194 3lws_A Aromatic amino acid bet 99.9 2.7E-21 9.1E-26 173.0 11.9 182 78-286 41-230 (357)
195 3i5t_A Aminotransferase; pyrid 99.9 8E-21 2.7E-25 176.8 15.4 227 39-284 51-315 (476)
196 2ctz_A O-acetyl-L-homoserine s 99.8 2.9E-20 9.8E-25 170.5 18.2 157 86-268 60-222 (421)
197 3nmy_A Xometc, cystathionine g 99.8 1.3E-20 4.4E-25 171.6 15.8 169 86-287 69-243 (400)
198 1rv3_A Serine hydroxymethyltra 99.8 1.9E-21 6.6E-26 181.3 10.0 208 42-269 44-271 (483)
199 2c0r_A PSAT, phosphoserine ami 99.8 4E-21 1.4E-25 172.2 11.4 194 43-268 4-211 (362)
200 3hmu_A Aminotransferase, class 99.8 1.8E-20 6.1E-25 174.3 15.6 245 38-299 51-334 (472)
201 3ecd_A Serine hydroxymethyltra 99.8 1.6E-20 5.5E-25 171.5 14.7 215 43-286 33-260 (425)
202 4e77_A Glutamate-1-semialdehyd 99.8 7.6E-21 2.6E-25 174.5 11.5 223 39-284 50-291 (429)
203 3hbx_A GAD 1, glutamate decarb 99.8 2.7E-19 9.2E-24 167.6 21.3 202 59-269 67-293 (502)
204 2okj_A Glutamate decarboxylase 99.8 5.6E-19 1.9E-23 165.5 21.3 195 66-269 111-329 (504)
205 3vp6_A Glutamate decarboxylase 99.8 6.8E-19 2.3E-23 165.2 21.6 199 62-269 110-332 (511)
206 1js3_A DDC;, DOPA decarboxylas 99.8 1.9E-19 6.4E-24 167.9 16.7 200 61-269 87-319 (486)
207 3b8x_A WBDK, pyridoxamine 5-ph 99.8 1.9E-18 6.4E-23 156.5 21.1 157 44-224 3-166 (390)
208 3h7f_A Serine hydroxymethyltra 99.8 1E-19 3.4E-24 168.1 12.2 212 43-285 46-271 (447)
209 2qma_A Diaminobutyrate-pyruvat 99.8 1.3E-18 4.4E-23 162.8 19.7 201 59-269 111-341 (497)
210 2x3l_A ORN/Lys/Arg decarboxyla 99.8 4.9E-20 1.7E-24 170.2 9.7 168 82-269 55-227 (446)
211 3gbx_A Serine hydroxymethyltra 99.8 1E-19 3.6E-24 165.9 11.6 204 60-285 42-258 (420)
212 2cjg_A L-lysine-epsilon aminot 99.8 2.2E-19 7.4E-24 166.0 13.0 215 39-268 51-311 (449)
213 2jis_A Cysteine sulfinic acid 99.8 3.2E-18 1.1E-22 160.7 20.9 181 79-269 139-343 (515)
214 2vi8_A Serine hydroxymethyltra 99.8 7.4E-19 2.5E-23 159.6 13.0 209 42-286 24-250 (405)
215 2fyf_A PSAT, phosphoserine ami 99.8 1.4E-18 4.8E-23 157.8 10.9 195 41-268 38-237 (398)
216 2yky_A Beta-transaminase; tran 99.6 3.6E-20 1.2E-24 171.1 0.0 230 38-299 96-344 (465)
217 2z67_A O-phosphoseryl-tRNA(SEC 99.8 1E-18 3.5E-23 161.7 9.2 173 87-268 132-313 (456)
218 4e1o_A HDC, histidine decarbox 99.7 1E-16 3.5E-21 149.3 18.3 199 61-268 92-324 (481)
219 2vyc_A Biodegradative arginine 99.7 7.9E-17 2.7E-21 157.2 17.4 170 86-269 207-402 (755)
220 1c4k_A Protein (ornithine deca 99.7 1.3E-17 4.4E-22 161.6 11.4 170 85-268 174-370 (730)
221 3ke3_A Putative serine-pyruvat 99.7 1.5E-16 5.2E-21 143.6 16.1 168 88-268 35-214 (379)
222 2a7v_A Serine hydroxymethyltra 99.7 9.1E-17 3.1E-21 149.2 13.9 206 43-269 55-281 (490)
223 1wyu_A Glycine dehydrogenase ( 99.7 3E-16 1E-20 144.4 16.2 191 44-268 66-276 (438)
224 3k40_A Aromatic-L-amino-acid d 99.7 5E-16 1.7E-20 144.4 17.4 198 62-269 88-318 (475)
225 1ohv_A 4-aminobutyrate aminotr 99.7 5E-16 1.7E-20 144.3 15.7 214 39-265 60-338 (472)
226 3n75_A LDC, lysine decarboxyla 99.7 6.8E-16 2.3E-20 148.6 15.7 167 86-269 197-383 (715)
227 3qm2_A Phosphoserine aminotran 99.5 3.3E-14 1.1E-18 128.3 8.3 194 43-268 27-236 (386)
228 3e77_A Phosphoserine aminotran 99.5 7.9E-14 2.7E-18 125.3 10.5 186 57-269 21-222 (377)
229 3m5u_A Phosphoserine aminotran 99.4 6.7E-13 2.3E-17 118.7 11.8 192 41-268 3-208 (361)
230 3bc8_A O-phosphoseryl-tRNA(SEC 99.2 1.9E-11 6.6E-16 111.4 8.6 175 86-267 96-280 (450)
231 3hl2_A O-phosphoseryl-tRNA(SEC 99.2 1.9E-11 6.6E-16 110.6 7.9 175 94-284 123-308 (501)
232 4ao9_A Beta-phenylalanine amin 99.2 3.3E-10 1.1E-14 104.0 14.7 205 38-267 83-301 (454)
233 4atq_A 4-aminobutyrate transam 99.0 8.2E-09 2.8E-13 95.0 17.7 221 39-268 61-310 (456)
234 4e3q_A Pyruvate transaminase; 99.0 9.7E-09 3.3E-13 94.9 18.0 230 38-284 63-329 (473)
235 4a0g_A Adenosylmethionine-8-am 99.0 4.5E-09 1.5E-13 103.4 16.1 215 43-268 381-680 (831)
236 3ou5_A Serine hydroxymethyltra 98.7 2.8E-07 9.5E-12 83.3 13.3 220 22-268 39-280 (490)
237 3gh5_A HEX1, beta-hexosaminida 82.9 5.8 0.0002 36.6 9.2 112 102-217 125-273 (525)
238 4fgs_A Probable dehydrogenase 80.4 8.6 0.00029 32.2 8.8 98 106-209 28-134 (273)
239 1jak_A Beta-N-acetylhexosamini 74.2 9.2 0.00031 35.2 7.7 25 194-218 225-249 (512)
240 3rwb_A TPLDH, pyridoxal 4-dehy 71.9 23 0.00079 28.6 9.1 97 106-207 5-109 (247)
241 2gjx_A Beta-hexosaminidase alp 71.8 9.4 0.00032 35.1 7.2 27 192-218 207-233 (507)
242 3gem_A Short chain dehydrogena 70.7 22 0.00074 29.1 8.7 65 106-177 26-90 (260)
243 4dqx_A Probable oxidoreductase 70.0 31 0.001 28.5 9.6 97 105-207 25-130 (277)
244 3m1a_A Putative dehydrogenase; 66.1 36 0.0012 27.9 9.3 65 108-177 6-70 (281)
245 3tpc_A Short chain alcohol deh 65.9 33 0.0011 27.8 8.9 68 106-178 6-73 (257)
246 1uls_A Putative 3-oxoacyl-acyl 65.8 40 0.0014 27.1 9.3 64 108-178 6-69 (245)
247 4e6p_A Probable sorbitol dehyd 64.5 36 0.0012 27.6 8.9 95 106-206 7-110 (259)
248 3gvc_A Oxidoreductase, probabl 64.3 31 0.001 28.5 8.4 96 106-206 28-131 (277)
249 3guy_A Short-chain dehydrogena 64.2 22 0.00075 28.2 7.3 93 109-207 3-101 (230)
250 1now_A Beta-hexosaminidase bet 64.0 15 0.00051 33.7 6.8 24 194-217 214-237 (507)
251 1ofu_X SULA, hypothetical prot 64.0 24 0.00082 25.4 6.6 81 130-215 32-112 (119)
252 3grp_A 3-oxoacyl-(acyl carrier 63.2 35 0.0012 27.9 8.6 69 105-178 25-93 (266)
253 1oft_A SULA, hypothetical prot 62.7 49 0.0017 25.2 9.2 81 130-215 74-154 (161)
254 4g81_D Putative hexonate dehyd 62.5 53 0.0018 26.9 9.4 97 105-207 7-115 (255)
255 3tzq_B Short-chain type dehydr 62.0 59 0.002 26.5 9.8 68 106-178 10-77 (271)
256 3rd5_A Mypaa.01249.C; ssgcid, 61.2 19 0.00064 30.0 6.6 70 105-179 14-83 (291)
257 3ppi_A 3-hydroxyacyl-COA dehyd 60.9 26 0.0009 28.8 7.4 66 107-177 30-95 (281)
258 4gkb_A 3-oxoacyl-[acyl-carrier 60.6 60 0.002 26.6 9.5 99 104-208 4-112 (258)
259 3n74_A 3-ketoacyl-(acyl-carrie 59.6 56 0.0019 26.3 9.2 68 105-177 7-74 (261)
260 4hp8_A 2-deoxy-D-gluconate 3-d 59.2 46 0.0016 27.2 8.4 99 105-208 7-109 (247)
261 4eso_A Putative oxidoreductase 59.2 45 0.0015 27.0 8.5 96 106-207 7-111 (255)
262 3h7a_A Short chain dehydrogena 59.1 69 0.0024 25.8 10.0 96 106-207 6-112 (252)
263 3op4_A 3-oxoacyl-[acyl-carrier 58.9 51 0.0017 26.5 8.7 96 106-207 8-112 (248)
264 3rih_A Short chain dehydrogena 58.7 78 0.0027 26.3 10.3 97 105-207 39-148 (293)
265 3pxx_A Carveol dehydrogenase; 58.0 35 0.0012 28.0 7.7 97 106-207 9-126 (287)
266 3dqp_A Oxidoreductase YLBE; al 57.8 49 0.0017 25.8 8.3 95 109-214 2-98 (219)
267 3l6e_A Oxidoreductase, short-c 57.5 46 0.0016 26.6 8.1 94 109-207 5-106 (235)
268 3r1i_A Short-chain type dehydr 56.9 80 0.0027 25.8 9.9 98 105-207 30-138 (276)
269 2o23_A HADH2 protein; HSD17B10 56.3 76 0.0026 25.4 10.5 68 106-178 11-78 (265)
270 1bqc_A Protein (beta-mannanase 56.0 32 0.0011 28.7 7.2 17 145-161 38-54 (302)
271 4ibo_A Gluconate dehydrogenase 54.8 78 0.0027 25.8 9.3 97 105-207 24-132 (271)
272 3ruf_A WBGU; rossmann fold, UD 54.7 77 0.0026 26.7 9.6 101 106-214 24-143 (351)
273 3ozo_A N-acetylglucosaminidase 54.2 35 0.0012 31.8 7.5 24 194-217 250-273 (572)
274 4gqr_A Pancreatic alpha-amylas 53.7 9.5 0.00033 34.3 3.7 30 197-226 74-103 (496)
275 1hdc_A 3-alpha, 20 beta-hydrox 53.3 81 0.0028 25.3 9.1 67 107-178 5-71 (254)
276 1c7s_A Beta-N-acetylhexosamini 53.0 26 0.00087 34.4 6.6 26 192-217 392-417 (858)
277 4fn4_A Short chain dehydrogena 51.8 61 0.0021 26.5 8.0 97 106-208 6-115 (254)
278 3ak4_A NADH-dependent quinucli 51.8 92 0.0032 25.0 9.4 34 106-139 11-44 (263)
279 1hxh_A 3BETA/17BETA-hydroxyste 50.9 94 0.0032 24.9 9.5 66 107-177 6-71 (253)
280 3lyl_A 3-oxoacyl-(acyl-carrier 50.7 92 0.0031 24.7 9.4 67 106-177 4-73 (247)
281 1tks_A 3,4-dihydroxy-2-butanon 50.7 22 0.00076 28.2 4.8 37 179-218 158-194 (204)
282 3rjz_A N-type ATP pyrophosphat 50.6 99 0.0034 25.1 9.9 99 109-217 7-120 (237)
283 1hjs_A Beta-1,4-galactanase; 4 50.6 77 0.0026 27.0 8.8 37 189-225 49-85 (332)
284 4dyv_A Short-chain dehydrogena 50.3 79 0.0027 25.8 8.6 94 108-207 29-132 (272)
285 1vl8_A Gluconate 5-dehydrogena 49.8 1E+02 0.0035 25.0 9.6 96 106-206 20-127 (267)
286 2yl5_A Beta-N-acetylhexosamini 49.6 14 0.00048 33.2 4.0 28 190-217 85-112 (442)
287 2yv1_A Succinyl-COA ligase [AD 49.4 36 0.0012 28.6 6.3 52 169-226 83-134 (294)
288 3gaf_A 7-alpha-hydroxysteroid 49.2 93 0.0032 25.0 8.8 97 105-207 10-117 (256)
289 3tsc_A Putative oxidoreductase 49.2 71 0.0024 26.1 8.2 32 106-137 10-41 (277)
290 3f9i_A 3-oxoacyl-[acyl-carrier 49.2 66 0.0022 25.6 7.9 75 106-185 13-89 (249)
291 4fc7_A Peroxisomal 2,4-dienoyl 49.0 1.1E+02 0.0037 25.0 9.7 95 107-207 27-134 (277)
292 3zu3_A Putative reductase YPO4 48.4 1.4E+02 0.0049 26.3 10.4 89 84-177 24-128 (405)
293 3e2i_A Thymidine kinase; Zn-bi 48.4 47 0.0016 26.7 6.5 106 117-238 43-151 (219)
294 2yvq_A Carbamoyl-phosphate syn 48.2 79 0.0027 23.2 9.6 107 105-218 22-130 (143)
295 3uve_A Carveol dehydrogenase ( 47.8 71 0.0024 26.2 8.0 33 105-137 9-41 (286)
296 2ew8_A (S)-1-phenylethanol deh 47.8 1E+02 0.0036 24.5 10.3 66 107-177 7-73 (249)
297 4dmm_A 3-oxoacyl-[acyl-carrier 47.3 79 0.0027 25.7 8.2 97 105-207 26-135 (269)
298 3tjr_A Short chain dehydrogena 47.3 93 0.0032 25.8 8.7 96 106-207 30-137 (301)
299 3qlj_A Short chain dehydrogena 46.9 1E+02 0.0035 25.8 9.0 95 107-207 27-143 (322)
300 3bk2_A RNAse J, metal dependen 46.8 41 0.0014 31.1 6.9 78 129-214 337-423 (562)
301 1xkq_A Short-chain reductase f 46.6 85 0.0029 25.6 8.3 33 107-139 6-38 (280)
302 3sx2_A Putative 3-ketoacyl-(ac 46.5 68 0.0023 26.1 7.7 33 106-138 12-44 (278)
303 3ged_A Short-chain dehydrogena 46.5 1E+02 0.0035 25.0 8.6 93 109-208 4-105 (247)
304 3sxp_A ADP-L-glycero-D-mannohe 46.4 1.3E+02 0.0046 25.3 10.7 34 105-138 8-43 (362)
305 1xhl_A Short-chain dehydrogena 46.3 86 0.0029 26.0 8.3 34 106-139 25-58 (297)
306 2nu8_A Succinyl-COA ligase [AD 46.3 30 0.001 29.0 5.4 76 141-226 53-128 (288)
307 1nff_A Putative oxidoreductase 46.2 1.1E+02 0.0039 24.5 9.4 67 107-178 7-73 (260)
308 3is3_A 17BETA-hydroxysteroid d 46.1 73 0.0025 25.9 7.8 96 106-207 17-125 (270)
309 3i6i_A Putative leucoanthocyan 45.7 72 0.0025 26.9 7.9 98 107-218 10-116 (346)
310 3tfo_A Putative 3-oxoacyl-(acy 45.7 1.2E+02 0.0041 24.6 9.5 93 109-207 6-110 (264)
311 2yl6_A Beta-N-acetylhexosamini 45.6 14 0.00046 33.3 3.2 27 191-217 83-109 (434)
312 4iin_A 3-ketoacyl-acyl carrier 45.4 1.2E+02 0.0041 24.5 10.4 99 104-207 26-136 (271)
313 3ai3_A NADPH-sorbose reductase 45.2 1.2E+02 0.004 24.4 9.8 68 106-178 6-77 (263)
314 3l77_A Short-chain alcohol deh 45.1 1.1E+02 0.0038 24.0 9.9 94 109-207 4-109 (235)
315 3tsm_A IGPS, indole-3-glycerol 45.0 1.1E+02 0.0036 25.5 8.5 52 164-221 126-177 (272)
316 4b79_A PA4098, probable short- 45.0 62 0.0021 26.3 6.9 92 108-208 12-106 (242)
317 3t7c_A Carveol dehydrogenase; 44.9 1.3E+02 0.0045 24.8 10.4 97 105-207 26-147 (299)
318 1g94_A Alpha-amylase; beta-alp 44.6 15 0.00051 33.0 3.4 30 198-227 63-92 (448)
319 3sju_A Keto reductase; short-c 44.3 1.2E+02 0.0041 24.7 8.9 94 108-207 25-130 (279)
320 1i4n_A Indole-3-glycerol phosp 44.2 24 0.00083 29.1 4.3 52 164-221 107-158 (251)
321 2jah_A Clavulanic acid dehydro 44.1 1.2E+02 0.0041 24.1 9.4 67 107-178 7-76 (247)
322 3rkr_A Short chain oxidoreduct 43.9 1.2E+02 0.0043 24.3 9.7 95 107-206 29-135 (262)
323 3imf_A Short chain dehydrogena 43.8 1.2E+02 0.0042 24.2 8.8 96 106-207 5-112 (257)
324 3pgx_A Carveol dehydrogenase; 43.5 93 0.0032 25.3 8.1 33 106-138 14-46 (280)
325 3ic5_A Putative saccharopine d 43.5 74 0.0025 21.5 8.1 91 108-217 6-97 (118)
326 3qiv_A Short-chain dehydrogena 43.1 1.2E+02 0.0042 24.0 8.7 68 106-178 8-78 (253)
327 2g1u_A Hypothetical protein TM 43.1 95 0.0032 22.7 7.4 90 105-211 17-107 (155)
328 3pk0_A Short-chain dehydrogena 43.1 1.3E+02 0.0044 24.2 9.3 98 105-207 8-117 (262)
329 3nyw_A Putative oxidoreductase 43.1 90 0.0031 25.0 7.8 36 107-142 7-42 (250)
330 2a4k_A 3-oxoacyl-[acyl carrier 43.0 1.2E+02 0.0039 24.6 8.5 67 107-178 6-72 (263)
331 3ucx_A Short chain dehydrogena 43.0 1E+02 0.0035 24.9 8.2 96 106-207 10-118 (264)
332 2epl_X N-acetyl-beta-D-glucosa 42.9 1.1E+02 0.0037 28.9 9.0 103 104-218 42-163 (627)
333 1fob_A Beta-1,4-galactanase; B 42.8 28 0.00097 29.8 4.8 37 189-225 49-85 (334)
334 3dhn_A NAD-dependent epimerase 42.5 84 0.0029 24.4 7.4 97 108-214 5-104 (227)
335 3ftp_A 3-oxoacyl-[acyl-carrier 42.4 1.4E+02 0.0047 24.3 9.3 96 106-207 27-134 (270)
336 4id9_A Short-chain dehydrogena 42.4 1.5E+02 0.0051 24.7 9.7 94 106-214 18-118 (347)
337 1x1t_A D(-)-3-hydroxybutyrate 42.4 1.3E+02 0.0045 24.1 9.9 66 108-178 5-75 (260)
338 2ojp_A DHDPS, dihydrodipicolin 42.3 83 0.0028 26.3 7.6 51 88-142 54-108 (292)
339 2yv2_A Succinyl-COA synthetase 42.1 44 0.0015 28.1 5.8 53 168-226 83-135 (297)
340 2pnf_A 3-oxoacyl-[acyl-carrier 42.1 1.2E+02 0.0043 23.7 9.8 68 106-178 6-77 (248)
341 2z1n_A Dehydrogenase; reductas 41.8 1.3E+02 0.0046 24.0 9.5 34 106-139 6-39 (260)
342 1ud2_A Amylase, alpha-amylase; 41.7 19 0.00065 32.5 3.7 29 198-226 79-107 (480)
343 3o38_A Short chain dehydrogena 41.7 1E+02 0.0035 24.8 8.0 97 106-207 21-130 (266)
344 3oec_A Carveol dehydrogenase ( 41.6 1E+02 0.0036 25.7 8.2 96 106-207 45-164 (317)
345 2j9r_A Thymidine kinase; TK1, 41.6 68 0.0023 25.6 6.5 106 117-238 43-151 (214)
346 2wsb_A Galactitol dehydrogenas 41.5 1.3E+02 0.0044 23.8 9.2 67 106-177 10-77 (254)
347 3ksu_A 3-oxoacyl-acyl carrier 41.3 1.3E+02 0.0045 24.2 8.6 97 105-207 9-120 (262)
348 4aie_A Glucan 1,6-alpha-glucos 41.1 19 0.00066 32.9 3.7 28 198-225 78-105 (549)
349 3e48_A Putative nucleoside-dip 41.1 90 0.0031 25.3 7.6 95 109-214 2-98 (289)
350 3m2p_A UDP-N-acetylglucosamine 41.1 1.3E+02 0.0044 24.7 8.7 93 109-214 4-101 (311)
351 1lwj_A 4-alpha-glucanotransfer 41.1 20 0.00068 32.0 3.7 29 198-226 68-96 (441)
352 1zk4_A R-specific alcohol dehy 41.0 1.3E+02 0.0045 23.7 9.2 33 107-139 6-38 (251)
353 1ht6_A AMY1, alpha-amylase iso 40.9 20 0.0007 31.6 3.7 30 198-227 67-96 (405)
354 3bh4_A Alpha-amylase; calcium, 40.8 20 0.00069 32.4 3.7 29 198-226 77-105 (483)
355 3io5_A Recombination and repai 40.6 65 0.0022 27.7 6.5 103 117-223 43-173 (333)
356 2jl1_A Triphenylmethane reduct 40.4 1.4E+02 0.0049 24.0 9.7 96 109-214 2-99 (287)
357 2ya0_A Putative alkaline amylo 40.3 18 0.00062 34.7 3.4 28 199-226 254-281 (714)
358 1hvx_A Alpha-amylase; hydrolas 40.3 20 0.0007 32.7 3.7 29 198-226 80-108 (515)
359 1mxg_A Alpha amylase; hyperthe 40.1 21 0.00073 31.8 3.7 29 198-226 85-113 (435)
360 2rhc_B Actinorhodin polyketide 40.0 1.5E+02 0.0051 24.1 9.3 67 107-178 22-91 (277)
361 1gcy_A Glucan 1,4-alpha-maltot 39.9 28 0.00096 32.0 4.5 31 198-228 91-121 (527)
362 3lf2_A Short chain oxidoreduct 39.7 1.5E+02 0.005 23.9 8.9 97 105-207 6-116 (265)
363 1wpc_A Glucan 1,4-alpha-maltoh 39.5 22 0.00074 32.2 3.7 29 198-226 81-109 (485)
364 1wzu_A Quinolinate synthetase 39.4 27 0.00092 29.6 3.9 100 109-217 121-228 (300)
365 2b4q_A Rhamnolipids biosynthes 39.2 1E+02 0.0035 25.1 7.6 35 106-140 28-62 (276)
366 1wza_A Alpha-amylase A; hydrol 39.1 24 0.0008 32.0 3.8 29 198-226 80-108 (488)
367 2z1k_A (NEO)pullulanase; hydro 38.9 22 0.00077 32.0 3.7 29 198-226 95-123 (475)
368 2cfc_A 2-(R)-hydroxypropyl-COM 38.8 1.4E+02 0.0049 23.5 8.6 65 109-178 4-72 (250)
369 3ndz_A Endoglucanase D; cellot 38.8 70 0.0024 27.4 6.7 24 200-223 83-106 (345)
370 3bzy_B ESCU; auto cleavage pro 38.7 20 0.00069 24.0 2.5 25 202-226 29-53 (83)
371 2zcu_A Uncharacterized oxidore 38.6 1.5E+02 0.005 23.8 8.6 93 110-214 2-96 (286)
372 2guy_A Alpha-amylase A; (beta- 38.6 23 0.00078 32.0 3.7 30 198-227 96-125 (478)
373 2aaa_A Alpha-amylase; glycosid 38.3 23 0.00078 32.0 3.6 29 199-227 97-125 (484)
374 1geg_A Acetoin reductase; SDR 38.0 1.5E+02 0.0052 23.6 9.1 65 109-178 4-71 (256)
375 3osu_A 3-oxoacyl-[acyl-carrier 37.9 1.4E+02 0.0047 23.7 8.1 93 108-206 5-110 (246)
376 1jae_A Alpha-amylase; glycosid 37.9 20 0.00068 32.4 3.2 30 198-227 73-102 (471)
377 3s55_A Putative short-chain de 37.7 1.6E+02 0.0056 23.8 9.9 96 106-207 9-128 (281)
378 4gmf_A Yersiniabactin biosynth 37.7 52 0.0018 28.7 5.7 28 197-224 103-130 (372)
379 2bgk_A Rhizome secoisolaricire 37.6 1.6E+02 0.0054 23.6 8.9 33 107-139 16-48 (278)
380 1yb1_A 17-beta-hydroxysteroid 37.5 1.6E+02 0.0055 23.7 8.7 68 105-177 29-99 (272)
381 1x7f_A Outer surface protein; 37.4 37 0.0013 29.9 4.6 80 172-265 46-126 (385)
382 3sc4_A Short chain dehydrogena 37.3 1.7E+02 0.0058 23.9 10.9 98 105-207 7-122 (285)
383 4egf_A L-xylulose reductase; s 37.2 1.6E+02 0.0056 23.7 9.0 57 106-162 19-79 (266)
384 2fp4_A Succinyl-COA ligase [GD 37.1 38 0.0013 28.7 4.6 52 169-226 84-136 (305)
385 3cxt_A Dehydrogenase with diff 37.1 1.7E+02 0.0059 24.0 8.9 34 106-139 33-66 (291)
386 1spx_A Short-chain reductase f 37.0 1.2E+02 0.004 24.6 7.7 32 108-139 7-38 (278)
387 3icg_A Endoglucanase D; cellul 36.9 68 0.0023 29.2 6.6 24 200-223 86-109 (515)
388 3mwd_B ATP-citrate synthase; A 36.9 78 0.0027 27.2 6.6 79 138-226 64-144 (334)
389 3v2h_A D-beta-hydroxybutyrate 36.5 1.7E+02 0.0059 23.8 9.5 96 106-207 24-133 (281)
390 1ua7_A Alpha-amylase; beta-alp 36.4 30 0.001 30.7 4.0 30 198-227 73-102 (422)
391 3dii_A Short-chain dehydrogena 36.4 1.6E+02 0.0055 23.4 8.4 32 109-140 4-35 (247)
392 1pjq_A CYSG, siroheme synthase 36.2 1.5E+02 0.0052 26.5 8.7 95 105-221 10-106 (457)
393 1cyd_A Carbonyl reductase; sho 35.8 1.6E+02 0.0054 23.1 10.4 74 105-185 5-81 (244)
394 3a5f_A Dihydrodipicolinate syn 35.7 1.9E+02 0.0065 24.0 9.2 52 88-142 54-108 (291)
395 2dh2_A 4F2 cell-surface antige 35.6 29 0.001 30.8 3.8 29 198-226 80-108 (424)
396 1oi7_A Succinyl-COA synthetase 35.5 48 0.0017 27.7 5.0 52 169-226 77-128 (288)
397 1eye_A DHPS 1, dihydropteroate 35.4 1.3E+02 0.0045 25.0 7.6 25 199-223 154-181 (280)
398 3a28_C L-2.3-butanediol dehydr 35.4 1.7E+02 0.0058 23.3 8.7 65 109-178 4-73 (258)
399 3dhu_A Alpha-amylase; structur 35.3 28 0.00096 31.1 3.7 29 198-226 82-110 (449)
400 3uuw_A Putative oxidoreductase 35.2 1.9E+02 0.0065 23.9 9.0 72 141-224 57-128 (308)
401 3svt_A Short-chain type dehydr 35.2 1.6E+02 0.0055 23.9 8.2 69 105-178 9-83 (281)
402 1qyd_A Pinoresinol-lariciresin 35.0 1.8E+02 0.0063 23.7 9.1 97 108-214 5-109 (313)
403 4f21_A Carboxylesterase/phosph 35.0 96 0.0033 24.9 6.7 125 83-211 107-242 (246)
404 3awd_A GOX2181, putative polyo 35.0 1.7E+02 0.0057 23.2 9.5 68 106-178 12-82 (260)
405 1iy8_A Levodione reductase; ox 34.9 1.8E+02 0.006 23.4 9.4 34 106-139 12-45 (267)
406 3rcn_A Beta-N-acetylhexosamini 34.4 31 0.0011 31.9 3.8 116 101-217 80-241 (543)
407 4imr_A 3-oxoacyl-(acyl-carrier 34.4 1.9E+02 0.0064 23.5 9.8 57 105-161 31-90 (275)
408 3zv4_A CIS-2,3-dihydrobiphenyl 34.3 55 0.0019 26.9 5.2 67 106-177 4-70 (281)
409 1ea9_C Cyclomaltodextrinase; h 34.2 49 0.0017 30.8 5.2 29 198-226 217-245 (583)
410 3daq_A DHDPS, dihydrodipicolin 34.1 1.5E+02 0.005 24.7 7.8 35 109-143 73-110 (292)
411 3d3w_A L-xylulose reductase; u 34.0 1.7E+02 0.0058 22.9 10.7 73 106-185 6-81 (244)
412 2uvd_A 3-oxoacyl-(acyl-carrier 33.7 1.8E+02 0.006 23.0 9.4 66 108-178 5-74 (246)
413 1j0h_A Neopullulanase; beta-al 33.4 39 0.0013 31.5 4.4 29 198-226 221-249 (588)
414 3tl3_A Short-chain type dehydr 33.3 93 0.0032 24.9 6.3 63 107-177 9-71 (257)
415 2wkj_A N-acetylneuraminate lya 33.2 1.7E+02 0.006 24.4 8.2 53 87-142 63-118 (303)
416 1w6u_A 2,4-dienoyl-COA reducta 33.1 2E+02 0.0068 23.4 9.3 65 108-177 27-95 (302)
417 2ag5_A DHRS6, dehydrogenase/re 33.0 1.6E+02 0.0054 23.3 7.7 32 107-138 6-37 (246)
418 2wc7_A Alpha amylase, catalyti 32.9 30 0.001 31.3 3.5 28 199-226 102-129 (488)
419 1vhx_A Putative holliday junct 32.8 1.2E+02 0.0039 22.6 6.2 60 166-225 40-103 (150)
420 2vt1_B Surface presentation of 32.8 28 0.00096 23.8 2.5 24 202-225 29-52 (93)
421 3uf0_A Short-chain dehydrogena 32.8 2E+02 0.0067 23.3 8.8 56 105-161 29-87 (273)
422 1xg5_A ARPG836; short chain de 32.8 1.9E+02 0.0066 23.3 8.3 32 108-139 33-64 (279)
423 3v8b_A Putative dehydrogenase, 32.7 2E+02 0.0069 23.4 9.1 68 106-178 27-97 (283)
424 1yht_A DSPB; beta barrel, hydr 32.7 32 0.0011 30.0 3.5 24 194-217 89-112 (367)
425 3t4x_A Oxidoreductase, short c 32.7 1.9E+02 0.0066 23.2 9.9 97 105-206 8-113 (267)
426 3gdg_A Probable NADP-dependent 32.6 1.9E+02 0.0064 23.1 8.2 68 105-177 18-92 (267)
427 1sb8_A WBPP; epimerase, 4-epim 32.5 1.3E+02 0.0045 25.2 7.5 116 85-214 11-145 (352)
428 3ezl_A Acetoacetyl-COA reducta 32.4 1.7E+02 0.0058 23.2 7.8 65 108-177 14-82 (256)
429 2ya1_A Putative alkaline amylo 32.2 32 0.0011 34.5 3.8 28 199-226 561-588 (1014)
430 3ew7_A LMO0794 protein; Q8Y8U8 32.2 1.1E+02 0.0038 23.4 6.5 92 110-213 3-94 (221)
431 3ioy_A Short-chain dehydrogena 32.2 1.7E+02 0.0059 24.4 8.1 36 107-142 8-43 (319)
432 3ijr_A Oxidoreductase, short c 31.9 2.1E+02 0.0072 23.4 10.0 96 106-207 46-155 (291)
433 2c07_A 3-oxoacyl-(acyl-carrier 31.7 2.1E+02 0.0071 23.2 10.2 65 108-177 45-112 (285)
434 1xp8_A RECA protein, recombina 31.7 1.3E+02 0.0044 26.1 7.2 18 201-218 189-206 (366)
435 1wzl_A Alpha-amylase II; pullu 31.7 46 0.0016 31.0 4.6 29 198-226 218-246 (585)
436 3edm_A Short chain dehydrogena 31.6 2E+02 0.0068 23.0 9.8 96 106-207 7-116 (259)
437 4aef_A Neopullulanase (alpha-a 31.5 34 0.0011 32.3 3.7 30 196-225 282-311 (645)
438 3tha_A Tryptophan synthase alp 31.3 2.1E+02 0.0073 23.3 8.1 153 40-218 40-204 (252)
439 1zja_A Trehalulose synthase; s 31.2 35 0.0012 31.5 3.7 29 198-226 78-106 (557)
440 1m53_A Isomaltulose synthase; 31.0 35 0.0012 31.6 3.7 29 198-226 91-119 (570)
441 3edf_A FSPCMD, cyclomaltodextr 30.9 35 0.0012 31.9 3.7 29 198-226 197-225 (601)
442 2vc6_A MOSA, dihydrodipicolina 30.8 1.8E+02 0.0062 24.1 7.9 52 88-142 53-107 (292)
443 3qfe_A Putative dihydrodipicol 30.7 2.4E+02 0.0083 23.7 10.5 53 87-142 63-118 (318)
444 3un1_A Probable oxidoreductase 30.7 1.6E+02 0.0055 23.7 7.4 32 107-138 28-59 (260)
445 3r6d_A NAD-dependent epimerase 30.7 1.2E+02 0.0041 23.4 6.5 92 109-214 7-100 (221)
446 3kux_A Putative oxidoreductase 30.6 1.4E+02 0.0048 25.3 7.3 41 132-177 69-111 (352)
447 1uok_A Oligo-1,6-glucosidase; 30.6 36 0.0012 31.4 3.7 29 198-226 77-105 (558)
448 3bc9_A AMYB, alpha amylase, ca 30.4 36 0.0012 31.8 3.7 29 198-226 207-235 (599)
449 3v2g_A 3-oxoacyl-[acyl-carrier 30.4 2.2E+02 0.0074 23.0 10.0 97 105-207 29-138 (271)
450 2ae2_A Protein (tropinone redu 30.4 2.1E+02 0.0071 22.8 10.1 67 106-177 8-77 (260)
451 1iv0_A Hypothetical protein; r 30.3 53 0.0018 22.6 3.6 57 167-223 37-96 (98)
452 3o63_A Probable thiamine-phosp 30.3 52 0.0018 26.8 4.2 53 170-222 46-105 (243)
453 3fwz_A Inner membrane protein 30.2 1.5E+02 0.0051 21.1 8.2 75 108-191 8-82 (140)
454 3bmv_A Cyclomaltodextrin gluca 30.2 36 0.0012 32.4 3.7 29 199-227 116-144 (683)
455 1d3c_A Cyclodextrin glycosyltr 30.1 36 0.0012 32.4 3.7 29 199-227 115-143 (686)
456 1cyg_A Cyclodextrin glucanotra 30.1 36 0.0012 32.3 3.7 29 199-227 111-139 (680)
457 1pq4_A Periplasmic binding pro 30.0 2.2E+02 0.0074 23.6 8.2 42 130-177 189-230 (291)
458 3p19_A BFPVVD8, putative blue 30.0 1.1E+02 0.0037 24.8 6.3 32 107-138 16-47 (266)
459 2yxg_A DHDPS, dihydrodipicolin 29.9 1.5E+02 0.0052 24.5 7.2 53 87-142 52-107 (289)
460 3kvo_A Hydroxysteroid dehydrog 29.9 2.6E+02 0.0088 23.7 11.3 96 106-207 44-158 (346)
461 1fmc_A 7 alpha-hydroxysteroid 29.8 2E+02 0.0069 22.5 9.9 68 106-178 10-80 (255)
462 2ehd_A Oxidoreductase, oxidore 29.8 2E+02 0.0067 22.4 9.1 31 109-139 7-37 (234)
463 1qho_A Alpha-amylase; glycosid 29.7 37 0.0013 32.3 3.7 28 199-226 107-134 (686)
464 2zic_A Dextran glucosidase; TI 29.7 38 0.0013 31.2 3.6 29 198-226 77-105 (543)
465 1ae1_A Tropinone reductase-I; 29.5 2.2E+02 0.0076 22.9 10.0 67 106-177 20-89 (273)
466 3enk_A UDP-glucose 4-epimerase 29.3 1.8E+02 0.0063 24.0 7.8 101 109-214 7-121 (341)
467 2x9g_A PTR1, pteridine reducta 29.2 2.3E+02 0.0079 23.0 8.7 33 108-140 24-56 (288)
468 3slg_A PBGP3 protein; structur 29.0 94 0.0032 26.4 5.9 73 107-186 24-97 (372)
469 3mio_A DHBP synthase, 3,4-dihy 29.0 96 0.0033 24.6 5.3 35 180-218 158-194 (206)
470 3t7y_A YOP proteins translocat 29.0 27 0.00093 24.1 1.9 24 202-225 44-67 (97)
471 3qtp_A Enolase 1; glycolysis, 28.9 1.5E+02 0.0052 26.5 7.1 95 116-220 281-380 (441)
472 1b93_A Protein (methylglyoxal 28.8 1.2E+02 0.004 22.8 5.6 69 146-219 50-119 (152)
473 3aj7_A Oligo-1,6-glucosidase; 28.7 41 0.0014 31.4 3.7 29 198-226 86-114 (589)
474 2d1y_A Hypothetical protein TT 28.4 2.2E+02 0.0076 22.6 9.7 32 107-138 6-37 (256)
475 2pzm_A Putative nucleotide sug 28.4 2.2E+02 0.0074 23.6 8.1 100 108-214 21-128 (330)
476 4aee_A Alpha amylase, catalyti 28.3 41 0.0014 32.1 3.7 29 198-226 310-338 (696)
477 2ze0_A Alpha-glucosidase; TIM 28.3 38 0.0013 31.3 3.4 29 198-226 77-105 (555)
478 2whl_A Beta-mannanase, baman5; 28.2 41 0.0014 27.9 3.4 24 198-221 62-85 (294)
479 3asu_A Short-chain dehydrogena 28.1 2.2E+02 0.0077 22.5 8.3 64 110-178 3-66 (248)
480 2b8t_A Thymidine kinase; deoxy 28.1 62 0.0021 25.9 4.2 92 117-221 26-124 (223)
481 4dry_A 3-oxoacyl-[acyl-carrier 27.9 2E+02 0.0067 23.4 7.6 34 107-140 33-66 (281)
482 3c01_E Surface presentation of 27.9 29 0.00099 24.0 1.9 26 202-227 29-54 (98)
483 1xu9_A Corticosteroid 11-beta- 27.8 2.2E+02 0.0074 23.1 7.8 32 108-139 29-60 (286)
484 1g57_A DHBP synthase, 3,4-dihy 27.6 1.2E+02 0.0041 24.2 5.7 35 180-218 167-201 (217)
485 1m7x_A 1,4-alpha-glucan branch 27.4 77 0.0026 29.7 5.3 30 197-226 202-231 (617)
486 3l4b_C TRKA K+ channel protien 27.4 2.1E+02 0.0073 22.0 9.3 87 109-211 2-88 (218)
487 3l5o_A Uncharacterized protein 27.3 1E+02 0.0034 25.6 5.4 74 130-215 140-215 (270)
488 2q1w_A Putative nucleotide sug 27.3 1.4E+02 0.0048 24.9 6.7 100 108-214 22-129 (333)
489 3tox_A Short chain dehydrogena 27.3 2.5E+02 0.0086 22.8 9.4 95 107-207 8-115 (280)
490 3kts_A Glycerol uptake operon 27.2 83 0.0028 24.7 4.6 42 169-218 18-59 (192)
491 3si9_A DHDPS, dihydrodipicolin 27.1 1.3E+02 0.0045 25.4 6.4 53 87-142 74-129 (315)
492 3r3s_A Oxidoreductase; structu 26.9 2.6E+02 0.0089 22.8 9.4 97 106-208 48-159 (294)
493 1o5k_A DHDPS, dihydrodipicolin 26.9 2.8E+02 0.0095 23.2 10.5 53 87-142 64-119 (306)
494 2q2v_A Beta-D-hydroxybutyrate 26.9 2.4E+02 0.0081 22.4 10.2 66 108-178 5-71 (255)
495 2vr5_A Glycogen operon protein 26.6 77 0.0026 30.3 5.3 29 199-227 266-294 (718)
496 2dtx_A Glucose 1-dehydrogenase 26.5 2.5E+02 0.0085 22.5 8.7 31 107-137 8-38 (264)
497 3czg_A Sucrose hydrolase; (alp 26.4 47 0.0016 31.4 3.7 29 198-226 154-182 (644)
498 4iiu_A 3-oxoacyl-[acyl-carrier 26.4 2.5E+02 0.0085 22.4 8.9 94 108-207 27-133 (267)
499 1xgk_A Nitrogen metabolite rep 26.3 2.9E+02 0.01 23.3 9.4 95 108-213 6-103 (352)
500 3jug_A Beta-mannanase; TIM-bar 26.2 47 0.0016 28.7 3.4 26 198-223 85-110 (345)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2.4e-42 Score=318.03 Aligned_cols=289 Identities=36% Similarity=0.703 Sum_probs=231.4
Q ss_pred cccccccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCC
Q 022213 7 NKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~ 86 (301)
+.|++.. ......+.++|+.+++.+.. ....++++|+|+.|+|..++.+++++.+.+++.+.+.......|++..|.
T Consensus 22 ~~w~~~~-~~~~~~~~~~i~~~~~~~~~--~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~ 98 (427)
T 3dyd_A 22 SMWSVRP-SDMAKKTFNPIRAIVDNMKV--KPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGF 98 (427)
T ss_dssp --CCCCC-CC----------------CC--CCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCC
T ss_pred cccCcch-hhHhhcccchHHHHHHHHhh--cccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCc
Confidence 4699544 44556667789998875532 12346788999999987655678899999999999887666689888899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCC
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (301)
.++|+++++++.+. +..+++++|++|+|+++|++.++++++++||+|+++.|+|.++...++..|.+++.+++.++.++
T Consensus 99 ~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 177 (427)
T 3dyd_A 99 LSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSW 177 (427)
T ss_dssp HHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred HHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCC
Confidence 99999999999764 66678899999999999999999999999999999999999999999999999999998776778
Q ss_pred CCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEE
Q 022213 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT 246 (301)
Q Consensus 167 ~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~ 246 (301)
.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++..+.++..+....++|+
T Consensus 178 ~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~ 257 (427)
T 3dyd_A 178 EIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILS 257 (427)
T ss_dssp EECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEE
T ss_pred CCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEE
Confidence 89999999999888899999999999999999999999999999999999999999999998777777777777778999
Q ss_pred EecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcccCCCcccccccC
Q 022213 247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQVCE 300 (301)
Q Consensus 247 ~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 300 (301)
++||||.|+++|+|+||+++++....+ .+++++.++.......+++.+.|.++
T Consensus 258 ~~S~sK~~~~~G~riG~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~ 310 (427)
T 3dyd_A 258 CGGLAKRWLVPGWRLGWILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGAL 310 (427)
T ss_dssp EEESTTTSSCGGGCCEEEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHH
T ss_pred EeeccccCCCcCcceEEEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHH
Confidence 999999999999999999998753332 13466677665433456777877653
No 2
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.5e-41 Score=308.52 Aligned_cols=270 Identities=24% Similarity=0.387 Sum_probs=228.8
Q ss_pred cchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHH
Q 022213 13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92 (301)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 92 (301)
.+.+.+..+.+.++.+.....+.. . .++++|+|+.|+|. +++++.+.+++.+.+... ...|++..|..++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ 76 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELR-R-QGVDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGIPELREA 76 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHH-H-TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHHHH-h-cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence 456777788888888776543322 1 35789999999974 566788899988887653 3479888899999999
Q ss_pred HHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHH
Q 022213 93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (301)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (301)
+++++.+.++..+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++.+|++.
T Consensus 77 ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 156 (385)
T 1b5p_A 77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPER 156 (385)
T ss_dssp HHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred HHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence 99999988888888999999999999999999999999999999999999999999999999999998754577899999
Q ss_pred HHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcc
Q 022213 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (301)
Q Consensus 173 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK 252 (301)
+++.++++++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+++ ...++..+.. +++|+++||||
T Consensus 157 l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK 234 (385)
T 1b5p_A 157 VRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAK 234 (385)
T ss_dssp HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTT
T ss_pred HHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechh
Confidence 999998888999999999999999999999999999999999999999999998876 4556666655 68999999999
Q ss_pred cCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 253 ~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
.|+++|+|+||+++++ +++++++.... ...+++.+.|.+
T Consensus 235 ~~~~~G~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 274 (385)
T 1b5p_A 235 AFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWA 274 (385)
T ss_dssp TTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHH
T ss_pred hcCCcccceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHH
Confidence 9999999999999843 47777776543 344677777764
No 3
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=4.9e-41 Score=306.82 Aligned_cols=274 Identities=12% Similarity=0.093 Sum_probs=214.0
Q ss_pred hhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHH-hcCCCCCCCCCCCCHHHHHH
Q 022213 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAV-RSGKFNCYATNSGIPPARRA 92 (301)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~p~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~g~~~lr~~ 92 (301)
..++..+++.++.+.+.+.+ ...+++|+|+.|.| +..+.+++++.+.++.. .+ +....++|++..|.++||++
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~----~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~a 80 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKE----DTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL 80 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTT----SSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHH
T ss_pred hcCCCCCCChHHHHHHHHhc----CCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHH
Confidence 35667889999998875532 12478999999974 32234567788888876 44 44456689999999999999
Q ss_pred HHHHHhhhCCCCCCCCC--EEEcCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCC
Q 022213 93 IADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (301)
Q Consensus 93 ia~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (301)
+++|+.+..+..+++++ +++|+|+++|+..+++++++ + |+|++++|+|.+|...++..|.+++.+++..++++++
T Consensus 81 ia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 159 (405)
T 3k7y_A 81 TQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI 159 (405)
T ss_dssp HHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred HHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence 99999776555566675 59999999999999999988 8 9999999999999999999999999999854456889
Q ss_pred CHHHHHhhccc--CccEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCC--CCCcccc-CCCC
Q 022213 169 DLDAVEALADK--NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLF-GSIV 242 (301)
Q Consensus 169 ~~~~l~~~~~~--~~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~--~~~~~~~-~~~~ 242 (301)
|++.+++.+++ ++++++++.| |||||.+++.+++++|+++|++|++++|+||+|.++.+++.. ..++..+ ....
T Consensus 160 d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 239 (405)
T 3k7y_A 160 NYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNI 239 (405)
T ss_dssp CHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTC
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCC
Confidence 99999998864 4567777665 899999999999999999999999999999999999886421 2223222 2346
Q ss_pred CEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHH----Hhhh-cccCCCccccccc
Q 022213 243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI----KDCL-SIYSDIPTFIQVC 299 (301)
Q Consensus 243 ~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~q~~ 299 (301)
++|+++||||+|+++|+|+||++++..+ +++++++ +... ...++++.+.|.+
T Consensus 240 ~~i~~~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 296 (405)
T 3k7y_A 240 AFSVCQSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRI 296 (405)
T ss_dssp CEEEEEECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred cEEEEeeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHH
Confidence 8999999999999999999999764322 2344443 3332 2344667777765
No 4
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-39 Score=298.06 Aligned_cols=287 Identities=28% Similarity=0.575 Sum_probs=229.2
Q ss_pred ccccccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 022213 8 KWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 87 (301)
+|+...+. ......+.++.+...+ ... ..++++|+|+.|+|..++.+++++.+.+++.+++.......|++..|..
T Consensus 3 ~~~~~~~~-~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~ 78 (416)
T 1bw0_A 3 SWDVSMSN-HAGLVFNPIRTVSDNA-KPS--PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP 78 (416)
T ss_dssp -CCCCCCH-HHHTCCCHHHHHHHTC-CCC--CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCH
T ss_pred ccccCchh-hhhccccHHHHHHHHH-HHh--hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCH
Confidence 59986555 4445555677766532 111 1236799999999865456788899999999988765556798878999
Q ss_pred HHHHHHHHHHhh------hCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecC
Q 022213 88 PARRAIADYLSR------DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (301)
Q Consensus 88 ~lr~~ia~~l~~------~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (301)
++|+++++++.+ .++..+++++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.++++
T Consensus 79 ~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 158 (416)
T 1bw0_A 79 EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCR 158 (416)
T ss_dssp HHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecC
Confidence 999999999982 24555788999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCC----CCCCccc
Q 022213 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI----PYTPMGL 237 (301)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~----~~~~~~~ 237 (301)
+++++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+++. .+.++..
T Consensus 159 ~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 238 (416)
T 1bw0_A 159 PENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD 238 (416)
T ss_dssp GGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTS
T ss_pred cccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHH
Confidence 555677999999999988888999999999999999999999999999999999999999999988765 4556665
Q ss_pred cCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcccCCCcccccccC
Q 022213 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQVCE 300 (301)
Q Consensus 238 ~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 300 (301)
++...++++++|+||.|+++|+|+||++++++...+ +++...++.......+++.+.|.++
T Consensus 239 ~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~ 299 (416)
T 1bw0_A 239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAAL 299 (416)
T ss_dssp SCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred ccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhH--HHHHHHHHHHhccccCCCcHHHHHH
Confidence 655567899999999999999999999987641122 2344444443222335677777653
No 5
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1e-39 Score=302.31 Aligned_cols=273 Identities=22% Similarity=0.295 Sum_probs=230.3
Q ss_pred ccccccccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC--CCCCCCCC
Q 022213 6 ENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATN 83 (301)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~ 83 (301)
...|+.+.+.+.+..+++.++.+.+... .+++|+|+.|.|+. .+.+++.+.+++.++++.. ...+|++.
T Consensus 47 ~~~~~~~~s~~~~~~~~s~~~~~~~~~~-------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~ 117 (448)
T 3aow_A 47 LGDVERFFSKKALEMRASEVRELLKLVE-------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTT 117 (448)
T ss_dssp TSCGGGGCCHHHHHCCCCHHHHHHHHHH-------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCT
T ss_pred ccchHHHhhHHHhcCCCcHHHHHHHhcc-------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCC
Confidence 3459988999999999999998876432 46799999999863 3456788888888887643 23479988
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCC
Q 022213 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163 (301)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 163 (301)
.|..+||+++++++.+.++.. ++++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.++++.+
T Consensus 118 ~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 196 (448)
T 3aow_A 118 KGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE 196 (448)
T ss_dssp TCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred CCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC
Confidence 899999999999997767766 7889999999999999999999999999999999999999999999999999988542
Q ss_pred CCCCCCHHHHHhhcc----c--CccEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcc
Q 022213 164 RNWEVDLDAVEALAD----K--NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236 (301)
Q Consensus 164 ~~~~~~~~~l~~~~~----~--~~~~v-~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~ 236 (301)
++|++.|++.++ + +++++ ++++|+||||.+++.+++++|+++|++||++||+||+|..+.|++..+.++.
T Consensus 197 ---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~ 273 (448)
T 3aow_A 197 ---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIK 273 (448)
T ss_dssp ---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTG
T ss_pred ---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence 389999999886 5 67776 4689999999999999999999999999999999999999999776666777
Q ss_pred ccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCcccccccC
Q 022213 237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVCE 300 (301)
Q Consensus 237 ~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~ 300 (301)
.++..+++|++.||||.++ +|+|+||++++. +++++++.... ...+++.++|.++
T Consensus 274 ~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~ 329 (448)
T 3aow_A 274 ALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--------GIIRKMEIAKQSTDLCTNVFGQVVA 329 (448)
T ss_dssp GGCTTSCEEEEEESTTTTC-GGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred hcCCCCCEEEEccchhhcc-ccccEEEEEeCH--------HHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 7766678999999999998 999999999853 47777776543 2446788888653
No 6
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.6e-39 Score=298.10 Aligned_cols=268 Identities=24% Similarity=0.379 Sum_probs=230.3
Q ss_pred cchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHH
Q 022213 13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-FNCYATNSGIPPARR 91 (301)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~ 91 (301)
.+++++..+++.++.+.+... ++++|+|+.|+|. +++++.+.+++.+++.... ...|++..|..++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~ 74 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKLAS-------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTK 74 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHHHH-------TSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHH
T ss_pred HHHHhhccCccHHHHHHHHhh-------cCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHH
Confidence 467778888888888876332 4689999999964 6788999999999987644 458998889999999
Q ss_pred HHHHHHhhhCCCCCCC-CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCC--------
Q 022213 92 AIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-------- 162 (301)
Q Consensus 92 ~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-------- 162 (301)
++++++.+.++..+++ ++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.+++.+
T Consensus 75 ~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~ 154 (422)
T 3fvs_A 75 ILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGEL 154 (422)
T ss_dssp HHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSC
T ss_pred HHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccccc
Confidence 9999999888888888 7999999999999999999999999999999999999999999999999999865
Q ss_pred --CCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC
Q 022213 163 --ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (301)
Q Consensus 163 --~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~ 240 (301)
..++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..+..
T Consensus 155 ~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 234 (422)
T 3fvs_A 155 GSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPG 234 (422)
T ss_dssp CBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT
T ss_pred ccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhccc
Confidence 235678999999999888999999999999999999999999999999999999999999999998766666666653
Q ss_pred -CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 241 -IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 241 -~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
.++++++.|+||.|+++|+|+||+++++ +++.+++.... ...+++.+.|.+
T Consensus 235 ~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a 287 (422)
T 3fvs_A 235 MWERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAA 287 (422)
T ss_dssp TGGGEEEEEEHHHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHH
T ss_pred ccCcEEEEecchhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHH
Confidence 3678999999999999999999999743 47777766543 244567777765
No 7
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1e-38 Score=290.61 Aligned_cols=278 Identities=18% Similarity=0.335 Sum_probs=223.4
Q ss_pred cchhhhcC--CcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC---CCCCCCCCCCH
Q 022213 13 DKQEHKAA--PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK---FNCYATNSGIP 87 (301)
Q Consensus 13 ~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~ 87 (301)
.+++.+.. .++.++++.+..........++++|+|+.|+|. +++++.+.+++.+++.... ...|++..|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~ 79 (398)
T 3ele_A 4 VNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDV 79 (398)
T ss_dssp SCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCH
T ss_pred hhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCCCCcH
Confidence 45556665 577888876544322111135689999999864 5678899999998887532 45798888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCC
Q 022213 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (301)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (301)
++|+++++++.+.++..+++++|++|+|+++++..++++++++| |+|+++.|+|.++...++..|.+++.++++. +++
T Consensus 80 ~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~ 158 (398)
T 3ele_A 80 ETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHF 158 (398)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTS
T ss_pred HHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCC
Confidence 99999999999888888899999999999999999999999999 9999999999999999999999999999854 367
Q ss_pred CCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHh------CCCeEEEccCCcccccCCCCCCCccccCC
Q 022213 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK------LRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (301)
Q Consensus 167 ~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~------~~~~ii~D~~y~~~~~~~~~~~~~~~~~~ 240 (301)
.+|++++++.++++++++++++|+||||.+++.+++++|+++|++ ||+++|+||+|..+.+++.....+.. .
T Consensus 159 ~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~ 236 (398)
T 3ele_A 159 QIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTK--Y 236 (398)
T ss_dssp SCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGG--T
T ss_pred cCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHh--h
Confidence 899999999998889999999999999999999999999999999 99999999999999987644433322 2
Q ss_pred CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcc--cCCCccccccc
Q 022213 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI--YSDIPTFIQVC 299 (301)
Q Consensus 241 ~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~ 299 (301)
.+++++++|+||.++++|+|+||+++++. +....++...+...... ..+++.+.|.+
T Consensus 237 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 295 (398)
T 3ele_A 237 YDNTLVCYSYSKSLSLPGERIGYVLVPDE--VYDKAELYAAVCGAGRALGYVCAPSLFQKM 295 (398)
T ss_dssp CSSEEEEEESTTTSSCTTTCCEEEECCTT--STTHHHHHHHHHHHHHHTTCCCSCHHHHHH
T ss_pred cCCeEEEEehhhcCCCccceeEEEEEcch--hhhHHHHHHHHHHHhhhccccCCCHHHHHH
Confidence 35789999999999999999999998654 22112344444443221 33556666654
No 8
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=4.1e-39 Score=295.75 Aligned_cols=277 Identities=19% Similarity=0.183 Sum_probs=219.7
Q ss_pred ccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 022213 12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP 88 (301)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 88 (301)
...++.+..+++.|+.+.+.+.+. ..+++|+|+.| +|.. ..++++.+.+++.+++.......|++..|..+
T Consensus 23 ~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~G~y~d~~~--~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~ 96 (420)
T 4f4e_A 23 SLFSAVELAPRDPILGLNEAFNAD----TRPTKVNLGVGVYTNEDG--KIPLLRAVRDAEKARVEAGLPRGYLPIDGIAA 96 (420)
T ss_dssp CTTTTCCCCCCCHHHHHHHHHHHC----CCSSCEECCCCSCCCTTS--CCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHH
T ss_pred CHhhcCCcCCCChHHHHHHHHHhc----CCCCcEEeeeeeeECCCC--CccCcHHHHHHHHHHhccCCCCCCCCCCCcHH
Confidence 355677788999999998766442 24689999999 6652 24455899999999888655568999899999
Q ss_pred HHHHHHHHHhhhCCCCCCCC--CEEEcCCHHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCC
Q 022213 89 ARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER 164 (301)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~--~i~~t~g~~~al~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 164 (301)
+|+++++++....+..++++ +|++|+|++++++.++ .+++++||+|++++|+|.++...++..|.+++.+++..++
T Consensus 97 lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 176 (420)
T 4f4e_A 97 YDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAK 176 (420)
T ss_dssp HHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETT
T ss_pred HHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccc
Confidence 99999999976444334677 8999999999999994 4667999999999999999999999999999999984445
Q ss_pred CCCCCHHHHHhhcc---cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCC-CCCCcccc-C
Q 022213 165 NWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLF-G 239 (301)
Q Consensus 165 ~~~~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~-~~~~~~~~-~ 239 (301)
++.+|++.+++.++ ++++++++++||||||.+++.+++++|+++|++||+++|+|++|..+.+++. ...++..+ +
T Consensus 177 ~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 256 (420)
T 4f4e_A 177 TNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAA 256 (420)
T ss_dssp TTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHH
T ss_pred cCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHh
Confidence 67899999999987 4678889999999999999999999999999999999999999999998742 23333333 2
Q ss_pred CCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHH----HHHhhh-cccCCCccccccc
Q 022213 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID----SIKDCL-SIYSDIPTFIQVC 299 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~q~~ 299 (301)
..+++|+++||||.|+++|+|+||+++...+ ++++. .++... ....+++.+.|.+
T Consensus 257 ~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
T 4f4e_A 257 ANLNVFVSSSFSKSFSLYGERVGALSIITDS-----KDEAARVLSQLKRVIRTNYSNPPTHGGAI 316 (420)
T ss_dssp TTCCEEEEEECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHH
T ss_pred cCCCEEEEEeCCccCcCcCCCcEEEEEEcCC-----HHHHHHHHHHHHHHHhcccCCCCHHHHHH
Confidence 3467999999999999999999999753321 23333 333332 2344567777654
No 9
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=5.1e-39 Score=293.58 Aligned_cols=266 Identities=21% Similarity=0.354 Sum_probs=225.1
Q ss_pred hhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 022213 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (301)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (301)
++++..+++.++.+.+. ..++++|+|+.|+|+ +++++.+.+++.+++.......|++..|..++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~-------~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la 71 (410)
T 3e2y_A 3 KRIEGLDSNVWVEFTKL-------AADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALS 71 (410)
T ss_dssp GGGTTCCCCHHHHTTTT-------TTSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHH
T ss_pred hhhccCCccHHHHHHHH-------hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHH
Confidence 45566677777766541 235789999999964 6788999999999887555558998889999999999
Q ss_pred HHHhhhCCCCCCC-CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCC---------CC
Q 022213 95 DYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP---------ER 164 (301)
Q Consensus 95 ~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---------~~ 164 (301)
+++.+.++..+++ ++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.+++.+ ..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 151 (410)
T 3e2y_A 72 CLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSS 151 (410)
T ss_dssp HHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGG
T ss_pred HHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecccccccccccccc
Confidence 9999888877888 8999999999999999999999999999999999999999999999999998753 23
Q ss_pred CCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCC
Q 022213 165 NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVP 243 (301)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~ 243 (301)
++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..+.. .++
T Consensus 152 ~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 231 (410)
T 3e2y_A 152 DWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231 (410)
T ss_dssp GEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred CCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCe
Confidence 5568999999999888999999999999999999999999999999999999999999999998766666666543 367
Q ss_pred EEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 244 vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
++++.|+||.++++|+|+||+++++ +++++++.... ...+++.+.|.+
T Consensus 232 ~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a 280 (410)
T 3e2y_A 232 TITIGSAGKTFSVTGWKLGWSIGPA--------HLIKHLQTVQQNSFYTCATPLQAA 280 (410)
T ss_dssp EEEEEEHHHHSSCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHH
T ss_pred EEEEecchhhcCCCCceEEEEEECH--------HHHHHHHHHHHhhccCCChHHHHH
Confidence 8999999999999999999999743 47777776643 244567777764
No 10
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=3.9e-38 Score=285.92 Aligned_cols=267 Identities=25% Similarity=0.411 Sum_probs=224.5
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
+.+.+..+++.++++.....+ .+++|+|+.|+|. +++++.+.+++.+.++... ..|++..|..++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~l 72 (389)
T 1gd9_A 4 SDRLELVSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLLELREAI 72 (389)
T ss_dssp HHHHHHSCCCHHHHHHHHHHT------CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHH
T ss_pred hhHhHhCChhHHHHHHHHHhh------hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcHHHHHHH
Confidence 556777888888888774432 2579999999864 5567889999998887543 4698878999999999
Q ss_pred HHHHhhhCCCCCCCCC-EEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHH
Q 022213 94 ADYLSRDLPYKLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (301)
Q Consensus 94 a~~l~~~~~~~~~~~~-i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (301)
++++.+.+|..+++++ |++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++++.++++.+|++.
T Consensus 73 a~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 152 (389)
T 1gd9_A 73 AEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDE 152 (389)
T ss_dssp HHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHH
T ss_pred HHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHH
Confidence 9999887777778889 999999999999999999999999999999999999999999999999998654567789999
Q ss_pred HHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEEecCc
Q 022213 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSIS 251 (301)
Q Consensus 173 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~S 251 (301)
+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+++..+.++..+.. .+++++++|+|
T Consensus 153 l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 232 (389)
T 1gd9_A 153 LKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFS 232 (389)
T ss_dssp HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEST
T ss_pred HHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecCh
Confidence 99999888889999999999999999999999999999999999999999999887654455555543 45689999999
Q ss_pred ccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
|.++++|+|+||++++. +++++++.... ...+++.+.|.+
T Consensus 233 K~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 273 (389)
T 1gd9_A 233 KTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYA 273 (389)
T ss_dssp TTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHH
T ss_pred hhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHH
Confidence 99999999999999842 47777776644 234567777754
No 11
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1.8e-38 Score=288.70 Aligned_cols=269 Identities=21% Similarity=0.346 Sum_probs=222.5
Q ss_pred hhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 022213 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (301)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (301)
.+.+..++..+..+.+ ..+.+...+++++|+|+.|+|. ++.++.+.+++.+.+. ....|++..|..++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la 76 (396)
T 3jtx_A 4 TLLKQLKPYPFARLHE-AMQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELRQACA 76 (396)
T ss_dssp HHHHHCCSCHHHHHHH-HTTTCCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHH
T ss_pred hhhccCCCChHHHHHH-HHHhhhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHH
Confidence 3556677777777765 3444444568899999999963 6678899999988775 3457998889999999999
Q ss_pred HHHhhhCCCC-CCCC-CEEEcCCHHHHHHHHHHHhcCCC-----CEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCC
Q 022213 95 DYLSRDLPYK-LSAD-DVYVTLGCKQAVEVILSVLARPG-----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167 (301)
Q Consensus 95 ~~l~~~~~~~-~~~~-~i~~t~g~~~al~~~~~~l~~~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 167 (301)
+++.+.++.. ++++ +|++|+|++++++.++++++++| |+|+++.|+|.++...++..|.+++.+++ .++++.
T Consensus 77 ~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~ 155 (396)
T 3jtx_A 77 NWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFN 155 (396)
T ss_dssp HHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCC
T ss_pred HHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCc
Confidence 9999888876 7788 99999999999999999999997 79999999999999999999999999998 456777
Q ss_pred CCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccc----cC-CCC
Q 022213 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL----FG-SIV 242 (301)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~----~~-~~~ 242 (301)
+|++.++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.+... +. ..+
T Consensus 156 ~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
T 3jtx_A 156 PDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQ 235 (396)
T ss_dssp CCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCT
T ss_pred cCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccC
Confidence 8999999988888999999999999999999999999999999999999999999999887633332211 11 246
Q ss_pred CEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcc-cCCCccccccc
Q 022213 243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQVC 299 (301)
Q Consensus 243 ~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~ 299 (301)
+++++.|+||.|+++|+|+||++++ ++++++++..... ..+++.+.|.+
T Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a 285 (396)
T 3jtx_A 236 KLLMFTSLSKRSNVPGLRSGFVAGD--------AELLKNFLLYRTYHGSAMSIPVQRA 285 (396)
T ss_dssp TEEEEEESTTTSSCGGGCCEEEEEC--------HHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred cEEEEeccccccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHH
Confidence 7899999999999999999999873 2577887776542 34667777765
No 12
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-39 Score=296.91 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=211.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
.++++|+|+.|.|+ +++|+.+.+++.++++.....+|++..|..+||+++++++.+.+|.++++++|++|+|++++
T Consensus 55 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a 130 (447)
T 3b46_A 55 QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG 130 (447)
T ss_dssp TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 36789999999864 56788999999988864234579988899999999999998888877888999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCC----------CCCCCHHHHHhhcccCccEEEEcCC
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER----------NWEVDLDAVEALADKNTAAMVIINP 189 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~v~l~~p 189 (301)
++.++++++++||+|++++|+|.++...++..|.+++.+++.+++ +|.+|+++|++.++++++++++++|
T Consensus 131 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 210 (447)
T 3b46_A 131 ILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP 210 (447)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESS
T ss_pred HHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCC
Confidence 999999999999999999999999999999999999999886543 5779999999999888899999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcccc--CCCCCEEEEecCcccCCCCcceeEEEEee
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--GSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~vi~~~s~SK~~~~~G~rvG~~~~~ 267 (301)
+||||.+++.+++++|+++|++||+++|+||+|..+.|++ ...++..+ +..++++++.|+||.|+++|+|+||+++.
T Consensus 211 ~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~ 289 (447)
T 3b46_A 211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL 289 (447)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECS
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeC
Confidence 9999999999999999999999999999999999999876 33344444 12357899999999999999999999973
Q ss_pred CCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 268 DPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
+ +++++.++.... ...+++++.|.+
T Consensus 290 ~-------~~l~~~l~~~~~~~~~~~~~~~~~a 315 (447)
T 3b46_A 290 N-------AELLSYAAKAHTRICFASPSPLQEA 315 (447)
T ss_dssp C-------HHHHHHHHHHHHHHTSSCCHHHHHH
T ss_pred C-------HHHHHHHHHHHhhccCCCChHHHHH
Confidence 2 247777766533 344567777765
No 13
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=3.1e-38 Score=286.90 Aligned_cols=263 Identities=19% Similarity=0.335 Sum_probs=213.6
Q ss_pred hhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 022213 16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD 95 (301)
Q Consensus 16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (301)
+.+..+++.++.+.+.... + ..+++++|+|+.|+|. +++++.+.+++.+++.... ..|++..|..++|+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~-~~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~ 79 (391)
T 3h14_A 7 SRSAVDPFIVMDVMEAARR-A-EEAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQRIAR 79 (391)
T ss_dssp STTCCCCCTTHHHHHHHHH-H-HHTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHHHHHH
T ss_pred hHhhcCcchHHHHHHHHHH-H-HhcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHH
Confidence 4566677788887764432 2 2247899999999864 6678889999998886533 479888899999999999
Q ss_pred HHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHh
Q 022213 96 YLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA 175 (301)
Q Consensus 96 ~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 175 (301)
++.+.++..+++++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.++++.+.++.+|++.+++
T Consensus 80 ~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (391)
T 3h14_A 80 LYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAG 159 (391)
T ss_dssp HHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTT
T ss_pred HHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHh
Confidence 99988888889999999999999999999999999999999999999999999999999999998776677899999987
Q ss_pred hcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCC
Q 022213 176 LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (301)
Q Consensus 176 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~ 255 (301)
. +++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+++.. .++..+ .+++++++|+||.++
T Consensus 160 ~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~--~~~~i~~~s~sK~~g 233 (391)
T 3h14_A 160 L---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKA-VTALEL--TDECYVINSFSKYFS 233 (391)
T ss_dssp S---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC-CCGGGT--CSSSEEEEESSSTTC
T ss_pred c---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCC-cChhhc--CCCEEEEEechhccC
Confidence 6 6899999999999999999999999999999999999999999999887643 233232 457899999999999
Q ss_pred CCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 256 ~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
++|+|+||+++++ +++++++.... ...+++.+.|.+
T Consensus 234 ~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a 270 (391)
T 3h14_A 234 MTGWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVA 270 (391)
T ss_dssp CTTSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CccceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHH
Confidence 9999999999854 36666666543 344567777654
No 14
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=2.7e-38 Score=296.50 Aligned_cols=271 Identities=19% Similarity=0.310 Sum_probs=219.6
Q ss_pred HHHHHHHHHhhcccCCCC----CeeeccCCCCCCCCCCC-------------------------ChHHHHHHHHHHHhcC
Q 022213 25 VKTSLASIIDSVNKNDPR----PVVPLGYGDPTAFPCFR-------------------------TAVEAEDAIVDAVRSG 75 (301)
Q Consensus 25 i~~~~~~~~~~~~~~~~~----~~i~l~~g~p~~~p~~~-------------------------~~~~~~~~~~~~~~~~ 75 (301)
+...++.+.+.+.+..+. .+|++++|+|..++..+ .|..+.+++.+.+...
T Consensus 43 ~~~~a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~ 122 (500)
T 3tcm_A 43 IVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMI 122 (500)
T ss_dssp HHHHHHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcC
Confidence 333344444443332343 89999999985443321 3445666666666652
Q ss_pred ---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhc
Q 022213 76 ---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWPYYEGIAQRK 151 (301)
Q Consensus 76 ---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~ 151 (301)
....|++..|..++|+++++++.+.+|..+++++|++|+|+++++..++++++ ++||.|+++.|+|..+...++..
T Consensus 123 ~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~ 202 (500)
T 3tcm_A 123 PGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALH 202 (500)
T ss_dssp TTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHT
T ss_pred CCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHc
Confidence 45689999999999999999999888888899999999999999999999998 89999999999999999999999
Q ss_pred CceEEEeecCCCCCCCCCHHHHHhhccc------CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCccc
Q 022213 152 QVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL 225 (301)
Q Consensus 152 g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~ 225 (301)
|.+++.++++.+.+|.+|++.|++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+
T Consensus 203 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~ 282 (500)
T 3tcm_A 203 GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQEN 282 (500)
T ss_dssp TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcccc
Confidence 9999999998877889999999998876 6788999999999999999999999999999999999999999999
Q ss_pred ccCC-CCCCCccc----c---CCCCCEEEEecCcccC-CCCcceeEEEEeeCCCCcccchhHHHHHHhhhcccCCCcccc
Q 022213 226 TFGS-IPYTPMGL----F---GSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFI 296 (301)
Q Consensus 226 ~~~~-~~~~~~~~----~---~~~~~vi~~~s~SK~~-~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (301)
.|++ ..+.++.. + ....++|+++||||+| |++|+|+||+++.+.+ ++++++++.......+++.+.
T Consensus 283 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~ 357 (500)
T 3tcm_A 283 IYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITG 357 (500)
T ss_dssp BCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHH
T ss_pred ccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHH
Confidence 9864 34444432 2 2334689999999998 8999999999985321 247788877766667888888
Q ss_pred cccC
Q 022213 297 QVCE 300 (301)
Q Consensus 297 q~~~ 300 (301)
|.++
T Consensus 358 q~~~ 361 (500)
T 3tcm_A 358 QILA 361 (500)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 15
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.7e-38 Score=289.38 Aligned_cols=272 Identities=19% Similarity=0.322 Sum_probs=210.8
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
..+.+..+++.+..+..... .+ ..+++++|+|+.|+|. ++.++.+.+++.+++.......|++..|..++|+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~-~~-~~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i 84 (412)
T 2x5d_A 11 FARIDRLPPYVFNITAELKM-AA-RRRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAI 84 (412)
T ss_dssp ----------CHHHHHHHHH-HH-HHTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHHH
T ss_pred hHHHhhcCchHHHHHHHHHH-HH-hhcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHH
Confidence 34455556666666554332 22 2247789999999863 556788999998877654345798778999999999
Q ss_pred HHHHhhhCCCCCCC-CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHH
Q 022213 94 ADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (301)
Q Consensus 94 a~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (301)
++++.+.+|..+++ ++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++++.++++.+|++.
T Consensus 85 a~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 164 (412)
T 2x5d_A 85 SHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELER 164 (412)
T ss_dssp HHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHH
Confidence 99998877777777 79999999999999999999999999999999999999999999999999998655466678999
Q ss_pred HHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEEecCc
Q 022213 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSIS 251 (301)
Q Consensus 173 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~S 251 (301)
+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+++..+.++..++. .+++++++|+|
T Consensus 165 l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~s 244 (412)
T 2x5d_A 165 AIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLS 244 (412)
T ss_dssp HHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC
T ss_pred HHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCc
Confidence 99999888899999999999999999999999999999999999999999999987655556655543 35789999999
Q ss_pred ccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
|.++++|+|+||++++. +++++++.... ...+++.++|.+
T Consensus 245 K~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 285 (412)
T 2x5d_A 245 KSYNMAGWRIGFMVGNP--------ELVSALARIKSYHDYGTFTPLQVA 285 (412)
T ss_dssp -CCSCTTSCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred cccCCcccceEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHH
Confidence 99999999999999832 47777776543 244667777765
No 16
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=3.5e-38 Score=286.16 Aligned_cols=271 Identities=23% Similarity=0.351 Sum_probs=224.4
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
+.+.+..+++.++++.....+.. .+++++|+|+.|+|. ++.++.+.+++.+.++.. ...|++..|..++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~l 76 (388)
T 1j32_A 4 AARVESVSPSMTLIIDAKAKAMK--AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAI 76 (388)
T ss_dssp CHHHHTSCCCSSTTTHHHHHHHH--TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred hhHhHhCCccHHHHHHHHHHHHH--hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHH
Confidence 45566677777776665443321 247789999999863 556788999998888653 34798888999999999
Q ss_pred HHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHH
Q 022213 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (301)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (301)
++++.+.++..+++++|++|+|+++++..++++++++||+|++++|+|.++...++..|.+++.++++.+.++.+|++.+
T Consensus 77 a~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 156 (388)
T 1j32_A 77 AQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQI 156 (388)
T ss_dssp HHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHH
T ss_pred HHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHH
Confidence 99998877777788999999999999999999999999999999999999999999999999999886545677999999
Q ss_pred HhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC--CCCEEEEecCc
Q 022213 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSIS 251 (301)
Q Consensus 174 ~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~S 251 (301)
++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++..+.++..+.. .++++++.|+|
T Consensus 157 ~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 236 (388)
T 1j32_A 157 RQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA 236 (388)
T ss_dssp HHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred HHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeech
Confidence 9999888899999999999999999999999999999999999999999999887655555555543 34689999999
Q ss_pred ccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
|.++++|+|+||+++++ +++++++.... ...+++.+.|.+
T Consensus 237 K~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 277 (388)
T 1j32_A 237 KTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYG 277 (388)
T ss_dssp TTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHH
T ss_pred hccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHH
Confidence 99999999999999743 47777766543 234566677654
No 17
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=8.1e-38 Score=284.25 Aligned_cols=273 Identities=25% Similarity=0.366 Sum_probs=225.8
Q ss_pred cccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 022213 11 FEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPAR 90 (301)
Q Consensus 11 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 90 (301)
+-...+.+..+++.++.+.....+... .++++|+|+.|+|. ++.++.+.+++.+.+.... ..|++..|..++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr 84 (389)
T 1o4s_A 12 HMVSRRISEIPISKTMELDAKAKALIK--KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELR 84 (389)
T ss_dssp --CCHHHHHSCCCSSHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHH
T ss_pred HHHHHHHhhcCccHHHHHHHHHHHHHh--cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHH
Confidence 345677888888989888765543221 36789999999863 5567889999998886533 4788878999999
Q ss_pred HHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCH
Q 022213 91 RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170 (301)
Q Consensus 91 ~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (301)
+++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|.++...++..|.+++.++++.++++.+|+
T Consensus 85 ~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 164 (389)
T 1o4s_A 85 EGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSL 164 (389)
T ss_dssp HHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCH
T ss_pred HHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCH
Confidence 99999998877777788999999999999999999999999999999999999999999999999999986545678999
Q ss_pred HHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEEec
Q 022213 171 DAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGS 249 (301)
Q Consensus 171 ~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s 249 (301)
+++++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++ ...++..++. .+++++++|
T Consensus 165 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s 243 (389)
T 1o4s_A 165 EEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYING 243 (389)
T ss_dssp HHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEE
T ss_pred HHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEee
Confidence 99999998888999999999999999999999999999999999999999999988865 3344444433 456899999
Q ss_pred CcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 250 ~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
+||.++++|+|+||+++++ +++++++.... ...+++.+.|.+
T Consensus 244 ~sK~~~~~G~r~G~l~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 286 (389)
T 1o4s_A 244 FSKSHSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYA 286 (389)
T ss_dssp STTTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHH
T ss_pred chhhcCCcccceEEEEeCH--------HHHHHHHHHhhhcccCCCHHHHHH
Confidence 9999999999999999843 47777766543 234566676654
No 18
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=3e-38 Score=287.89 Aligned_cols=278 Identities=14% Similarity=0.128 Sum_probs=213.3
Q ss_pred hhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 022213 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD 95 (301)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (301)
+...+++.++.+.+..... ..+.+|+|+.|.| +..+..+..+.+.+++.+.........|.+..|..++|+++++
T Consensus 7 ~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 82 (401)
T 7aat_A 7 VEMGPPDPILGVTEAFKRD----TNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAE 82 (401)
T ss_dssp CCCCCCCHHHHHHHHHHHC----CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCChhHHHHHHHhhC----CCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHH
Confidence 3455778888887655432 3466999999997 4332233445788888877664445589988899999999999
Q ss_pred HHhhhCCCCCCCCCEEE--cCCHHHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCH
Q 022213 96 YLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLA---RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170 (301)
Q Consensus 96 ~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (301)
++.+.++..+++++|++ |+|++++++.+++++. ++||+|++++|+|.++...++..|.+++.+++...+++.+|+
T Consensus 83 ~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 162 (401)
T 7aat_A 83 LALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDF 162 (401)
T ss_dssp HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred HhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCH
Confidence 99887776677999987 9999999999887765 899999999999999999999999999999986555678999
Q ss_pred HHHHhhcc---cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCC--CCCCcccc-CCCCCE
Q 022213 171 DAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLF-GSIVPV 244 (301)
Q Consensus 171 ~~l~~~~~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~-~~~~~v 244 (301)
+.+++.+. ++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++. ...++..+ ....++
T Consensus 163 ~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
T 7aat_A 163 TGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDV 242 (401)
T ss_dssp HHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcE
Confidence 97776654 4678889999999999999999999999999999999999999999988643 12233222 334678
Q ss_pred EEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 245 i~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
|+++||||.|+++|+|+||++++..+... ...++..++.... ...+++.+.|.+
T Consensus 243 i~~~S~sK~~~~~G~RiG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (401)
T 7aat_A 243 VLSQSYAKNMGLYGERAGAFTVICRDAEE-AKRVESQLKILIRPMYSNPPMNGARI 297 (401)
T ss_dssp EEEEECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred EEEecCCcccccccCceEEEEEEeCCHHH-HHHHHHHHHHHHHhccCCCChHHHHH
Confidence 99999999999999999999874422100 0114455554432 344555555543
No 19
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=295.05 Aligned_cols=253 Identities=22% Similarity=0.379 Sum_probs=200.7
Q ss_pred CeeeccCCCCCCCCCCC---------------------ChHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHh
Q 022213 43 PVVPLGYGDPTAFPCFR---------------------TAVEAEDAIVDAVRSG---KFNCYATNSGIPPARRAIADYLS 98 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~---------------------~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~ 98 (301)
.+|++++|+|..+...+ .|..+.+++.++++.. ....|++..|..++|+++++++.
T Consensus 64 ~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 143 (498)
T 3ihj_A 64 EVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYIT 143 (498)
T ss_dssp SCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHH
T ss_pred hhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 89999999996432111 2445556666666642 34689999999999999999999
Q ss_pred hhC-CCCCCCCCEEEcCCHHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHH
Q 022213 99 RDL-PYKLSADDVYVTLGCKQAVEVILSVLARPGA----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (301)
Q Consensus 99 ~~~-~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (301)
+.+ |+.+++++|++|+|+++++..++++++++|| .|+++.|+|..|...++..|.+++.++++.+++|.+|+++|
T Consensus 144 ~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 223 (498)
T 3ihj_A 144 RRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNEL 223 (498)
T ss_dssp HHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHH
T ss_pred HhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHH
Confidence 877 4888999999999999999999999999875 99999999999999999999999999998877899999999
Q ss_pred Hhhccc-----CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCC-CCCCccccC--------
Q 022213 174 EALADK-----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLFG-------- 239 (301)
Q Consensus 174 ~~~~~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~-~~~~~~~~~-------- 239 (301)
++.+++ +++++++++|+||||.+++.+++++|+++|++|++++|+||+|..+.|++. .+.++..+.
T Consensus 224 e~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~ 303 (498)
T 3ihj_A 224 RRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303 (498)
T ss_dssp HHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHH
T ss_pred HHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhccccc
Confidence 998876 578899999999999999999999999999999999999999999999754 555555432
Q ss_pred CCCCEEEEecCcccC-CCCcceeEEEEeeCCCCcccchhHHHHHHhhhcccCCCcccccccC
Q 022213 240 SIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQVCE 300 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~-~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 300 (301)
...++|+++||||.| |++|+|+||+++.+.+ +++++.+........+++.+.|.++
T Consensus 304 ~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~-----~~l~~~l~~~~~~~~~~~~~~q~a~ 360 (498)
T 3ihj_A 304 SNVELASFHSTSKGYMGECGYRGGYMEVINLH-----PEIKGQLVKLLSVRLCPPVSGQAAM 360 (498)
T ss_dssp TTCCEEEEEESSSSTTCCSSSCCEEEEEESCC-----HHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred CceeEEEEeccccccccCcccceEEEEEecCC-----HHHHHHHHHHHhccCCCCHHHHHHH
Confidence 234689999999999 7899999999863321 4688888877666678888888764
No 20
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.2e-37 Score=286.47 Aligned_cols=268 Identities=20% Similarity=0.231 Sum_probs=216.2
Q ss_pred cccccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHH---H---------HHHHHHHHhcCC
Q 022213 9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVE---A---------EDAIVDAVRSGK 76 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~---~---------~~~~~~~~~~~~ 76 (301)
|....+++.+..+++.++.+.+.... .++++|+|+.|.|+.. .++.... + .+...+
T Consensus 3 ~~~~~s~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~------ 70 (425)
T 2r2n_A 3 YARFITAASAARNPSPIRTMTDILSR-----GPKSMISLAGGLPNPN-MFPFKTAVITVENGKTIQFGEEMMKR------ 70 (425)
T ss_dssp GGGGSCHHHHTCCCCSGGGHHHHHHH-----SCTTCEECCCCCCCGG-GCSEEEEEEEETTSCCEEECHHHHHH------
T ss_pred hhHHHHHHHhcCCCchHHHHHHHhhc-----CCCCeEEcCCcCCCch-hCCHHHHHHHHhhcccccccccchhh------
Confidence 55667889999999999998875432 1367999999998631 1221000 0 111111
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-------CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH
Q 022213 77 FNCYATNSGIPPARRAIADYLSRDLPYKLS-------ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149 (301)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~ 149 (301)
..+|++..|.++||+++++++.+.++...+ +++|++|+|++++++.++++++++||+|++++|+|.++...++
T Consensus 71 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~ 150 (425)
T 2r2n_A 71 ALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH 150 (425)
T ss_dssp HTSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHG
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHH
Confidence 137999999999999999999887776653 3799999999999999999999999999999999999999999
Q ss_pred hcCceEEEeecCCCCCCCCCHHHHHhhcc------------cCccEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCeE
Q 022213 150 RKQVEVRHFDLLPERNWEVDLDAVEALAD------------KNTAAMVI-INPGNPCGNVFTYHHLQEIAEMARKLRVMV 216 (301)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~v~l-~~p~nptG~~~~~~~l~~i~~~~~~~~~~i 216 (301)
..|.+++.++++. .++|++.|++.++ .+++++++ ++||||||.+++.+++++|+++|++||+++
T Consensus 151 ~~g~~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~l 227 (425)
T 2r2n_A 151 PLGCNIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227 (425)
T ss_dssp GGTCEEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HcCCEEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 9999999998753 2489999999886 35677765 689999999999999999999999999999
Q ss_pred EEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccc
Q 022213 217 VADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTF 295 (301)
Q Consensus 217 i~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 295 (301)
|+||+|.++.|++..+.++..++..+++|+++||||.++ +|+|+||+++++ +++++++.... ...+++.+
T Consensus 228 i~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~ 298 (425)
T 2r2n_A 228 IEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTLHPSTF 298 (425)
T ss_dssp EEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTCSSCHH
T ss_pred EEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcCCCCHH
Confidence 999999999987766666766766678999999999998 999999999854 47777777644 34567888
Q ss_pred ccccC
Q 022213 296 IQVCE 300 (301)
Q Consensus 296 ~q~~~ 300 (301)
.|.++
T Consensus 299 ~q~a~ 303 (425)
T 2r2n_A 299 NQLMI 303 (425)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88653
No 21
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.1e-37 Score=283.68 Aligned_cols=246 Identities=18% Similarity=0.159 Sum_probs=203.1
Q ss_pred hhcCCcccHHHHHHHHHhhcccCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHHH
Q 022213 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVD-AVRSGKFNCYATNSGIPPARRA 92 (301)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~p~~~p~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g~~~lr~~ 92 (301)
+...+++.++.+.+.+... ..+++|+|+.| +|.. ..+.++.+.+++.+ ++.......|++..|..++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~y~d~~~--~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 78 (397)
T 3fsl_A 5 VDAYAGDPILTLMERFKED----PRSDKVNLSIGLYYNEDG--IIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHA 78 (397)
T ss_dssp CCCCCCCHHHHHHHHHHTC----CCSCCEECSSCCCCCTTS--CCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHH
T ss_pred CCCCCCCchhhHHHHHhcC----CCCCeEEEeeeEEECCCC--CccCcHHHHHHHHhhccCccccccCCCCCchHHHHHH
Confidence 4567788888887755432 35789999999 5542 24555899999998 8876455689988899999999
Q ss_pred HHHHHhhhCCCCCCCC--CEEEcCCHHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCC
Q 022213 93 IADYLSRDLPYKLSAD--DVYVTLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (301)
Q Consensus 93 ia~~l~~~~~~~~~~~--~i~~t~g~~~al~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (301)
+++++....+..++++ +|++|+|++++++.++ .+++++||+|+++.|+|.++...++..|.+++.+++..++++.+
T Consensus 79 la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (397)
T 3fsl_A 79 IAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGV 158 (397)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEE
T ss_pred HHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcC
Confidence 9999976444334678 8999999999999995 45578999999999999999999999999999998854456789
Q ss_pred CHHHHHhhcc---cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCC-CCCCCcccc-CCCCC
Q 022213 169 DLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLF-GSIVP 243 (301)
Q Consensus 169 ~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~-~~~~~~~~~-~~~~~ 243 (301)
|++.+++.++ ++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++ ....++..+ +..++
T Consensus 159 d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 3fsl_A 159 RFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLP 238 (397)
T ss_dssp CHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred cHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCC
Confidence 9999999987 456788889999999999999999999999999999999999999998863 223333333 34567
Q ss_pred EEEEecCcccCCCCcceeEEEEeeC
Q 022213 244 VITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 244 vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+|+++||||.++++|+|+||++++.
T Consensus 239 ~i~~~S~SK~~~~~G~riG~~~~~~ 263 (397)
T 3fsl_A 239 ALVSNSFSKIFSLYGERVGGLSVMC 263 (397)
T ss_dssp EEEEEECTTTTTCGGGCCEEEEEEC
T ss_pred EEEEecccccccCcCCCeeEEEEec
Confidence 9999999999999999999998743
No 22
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-37 Score=284.57 Aligned_cols=282 Identities=25% Similarity=0.461 Sum_probs=222.2
Q ss_pred cccccccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCC
Q 022213 7 NKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~ 86 (301)
.|..-+...+.+..+.+.++.+. ..+.+.. .++++|+|+.|.|... .++.++.+.+++.+.+.... ..|++..|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~ 80 (406)
T 1xi9_A 6 HHGSIRASKRALSVEYAIRDVVL--PARELEK-KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGL 80 (406)
T ss_dssp ---CCCCCHHHHTCCC---------CHHHHHH-TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCC
T ss_pred ccchhhHHHHHhcCChhHHHHHH--HHHHHHH-cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCc
Confidence 34666788888888888887776 3333322 3678999999997321 35667889999988886532 368887899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCC
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (301)
.++|+++++++.+.++.++++++|++|+|+++++..++++++++||+|++++|+|.++...++..|.+++.++++.++++
T Consensus 81 ~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 160 (406)
T 1xi9_A 81 PELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDW 160 (406)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTS
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCC
Confidence 99999999999987787888999999999999999999999999999999999999999999999999999998654567
Q ss_pred CCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCC-EE
Q 022213 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VI 245 (301)
Q Consensus 167 ~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~-vi 245 (301)
.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++ ...++..++ .++ +|
T Consensus 161 ~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i 238 (406)
T 1xi9_A 161 QPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVI 238 (406)
T ss_dssp EECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEE
T ss_pred cCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEE
Confidence 789999999998888999999999999999999999999999999999999999999988843 344555554 456 89
Q ss_pred EEecCcccCCCCcceeEEEE--eeCCCCcccchhHHHHHHhhhcccCCCccccccc
Q 022213 246 TLGSISKRWLVPGWRFGWLV--TNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 246 ~~~s~SK~~~~~G~rvG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 299 (301)
+++|+||.++++|+|+||++ +++.. ..+++++++.......+++.+.|.+
T Consensus 239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~~a 290 (406)
T 1xi9_A 239 VMNGLSKVYFATGWRLGYMYFVDPENK----LSEVREAIDRLARIRLCPNTPAQFA 290 (406)
T ss_dssp EEEESTTTTCCGGGCCEEEEEECTTCT----THHHHHHHHHHHHHTCCSCSHHHHH
T ss_pred EEeccccccCCCccEEEEEEEecCchh----HHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 99999999999999999998 53210 0146777766543224567777654
No 23
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=5.5e-38 Score=283.80 Aligned_cols=246 Identities=20% Similarity=0.288 Sum_probs=205.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-CEEEcCCHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ 118 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~ 118 (301)
.++++|+|+.|+|. ++.++.+.+++.++++......|++..|..++|+++++++.+.+|..++++ +|++|+|+++
T Consensus 23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~ 98 (376)
T 2dou_A 23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98 (376)
T ss_dssp TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence 46789999999863 556788999999888643345788766889999999999988777777776 9999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCC
Q 022213 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 119 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 198 (301)
+++.++++++++||+|+++.|+|.++...++..|.+++.+++ ++++.+|++.+++.++++++++++++|+||||.+++
T Consensus 99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 176 (376)
T 2dou_A 99 GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVAD 176 (376)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCC
Confidence 999999999999999999999999999999999999999987 456778999998888777889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhH
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~ 278 (301)
.+++++|+++|++||+++|+||+|..+.+++.....+...+..+++++++|+||.++++|+|+||++++. ++
T Consensus 177 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~ 248 (376)
T 2dou_A 177 WGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------EA 248 (376)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------HH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------HH
Confidence 9999999999999999999999999998865322223322334578999999999999999999998732 57
Q ss_pred HHHHHhhhc-ccCCCccccccc
Q 022213 279 IDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 279 ~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
+++++.... ...+++.+.|.+
T Consensus 249 ~~~l~~~~~~~~~~~~~~~~~a 270 (376)
T 2dou_A 249 LARLERVKGVIDFNQYAGVLRM 270 (376)
T ss_dssp HHHHHHHHHHHCCCSCHHHHHH
T ss_pred HHHHHHHHHhcccCCCHHHHHH
Confidence 777776544 233567777754
No 24
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-37 Score=280.72 Aligned_cols=266 Identities=27% Similarity=0.406 Sum_probs=219.5
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
+.+.+..+++.+..+.+.. . ..++|+|+.|.|. ++.++.+.+++.++++.. ...|++..|..++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~l 71 (411)
T 2o0r_A 4 VSRLRPYATTVFAEMSALA-T------RIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAI 71 (411)
T ss_dssp CGGGGGGSSCHHHHHHHHH-H------TTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred hhHhHhcCccHHHHHHHHh-h------cCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHH
Confidence 4555666666666655422 2 3578999999863 556788999999988753 45798888999999999
Q ss_pred HHHHhhhCCCCCCCC-CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCC-CCCCCCHH
Q 022213 94 ADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLD 171 (301)
Q Consensus 94 a~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~ 171 (301)
++++.+.+|..++++ +|++|+|+++++..++++++++||+|+++.|+|.++...++..|.+++.++++.+ .++.+|++
T Consensus 72 a~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 151 (411)
T 2o0r_A 72 AAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDAD 151 (411)
T ss_dssp HHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHH
T ss_pred HHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHH
Confidence 999988777777888 9999999999999999999999999999999999999999999999999987543 34668999
Q ss_pred HHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEEecC
Q 022213 172 AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSI 250 (301)
Q Consensus 172 ~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~ 250 (301)
.|++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++..+.++..++. .++++++.|+
T Consensus 152 ~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~ 231 (411)
T 2o0r_A 152 ALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSA 231 (411)
T ss_dssp HHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEH
T ss_pred HHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeec
Confidence 999999888899999999999999999999999999999999999999999999887655556655543 4568999999
Q ss_pred cccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 251 SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
||.++++|+|+||++++. +++++++.... ...+++.+.|.+
T Consensus 232 sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 273 (411)
T 2o0r_A 232 AKMFNCTGWKIGWACGPA--------ELIAGVRAAKQYLSYVGGAPFQPA 273 (411)
T ss_dssp HHHTTCTTTCEEEEECCH--------HHHHHHHHHHHHHTSCCCTTHHHH
T ss_pred hhhcCCccceEEEEeeCH--------HHHHHHHHHHhhccCCCChHHHHH
Confidence 999999999999999742 47777766543 233556676654
No 25
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=6.6e-37 Score=277.69 Aligned_cols=244 Identities=24% Similarity=0.379 Sum_probs=207.8
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-CEEEcCCHHHHH
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAV 120 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al 120 (301)
.++|+|+.|.|. +++++.+.+++.++++.. ...|++..|..++|+++++++.+.+|..++++ +|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~ 104 (386)
T 1u08_A 30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL 104 (386)
T ss_dssp TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence 578999999863 556789999999988753 34798878999999999999988777777888 999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHH
Q 022213 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 200 (301)
+.++++++++||+|+++.|+|+++...++..|.+++.++++.+ ++.+|++++++.++++++++++++|+||||.+++.+
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 183 (386)
T 1u08_A 105 YAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA 183 (386)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHH
Confidence 9999999999999999999999999999999999999998543 567999999999988889999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC-CCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHH
Q 022213 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~ 279 (301)
++++|+++|++||+++|+|++|..+.+++....++..+. ..++++++.|+||.++++|+|+||+++++ +++
T Consensus 184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 255 (386)
T 1u08_A 184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PIS 255 (386)
T ss_dssp HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HHH
T ss_pred HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--------HHH
Confidence 999999999999999999999999988765555554442 23578999999999999999999999843 477
Q ss_pred HHHHhhhc-ccCCCccccccc
Q 022213 280 DSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 280 ~~~~~~~~-~~~~~~~~~q~~ 299 (301)
++++.... ...+++.+.|.+
T Consensus 256 ~~l~~~~~~~~~~~~~~~~~a 276 (386)
T 1u08_A 256 AEIRKVHQYLTFSVNTPAQLA 276 (386)
T ss_dssp HHHHHHHHHHTSSCCHHHHHH
T ss_pred HHHHHHHHhhccCCChHHHHH
Confidence 77766543 234566666654
No 26
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=9.5e-38 Score=285.29 Aligned_cols=268 Identities=21% Similarity=0.313 Sum_probs=213.8
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
.++....+++.+..+.+.... ..+.++|+|+.|+|. ++.++.+.+++.++++......|++..|..++|+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~----~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 94 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIE----HGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAI 94 (404)
T ss_dssp CHHHHTSCCCTTC-------C----CCSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHh----cCCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Confidence 445555666666665542211 235679999999964 556788999998887543234688877999999999
Q ss_pred HHHHhhhCCCCCCC-CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHH
Q 022213 94 ADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (301)
Q Consensus 94 a~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (301)
++++.+.+|..+++ ++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.++++. +++.+|++.
T Consensus 95 a~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~ 173 (404)
T 2o1b_A 95 VDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSK 173 (404)
T ss_dssp HHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGG
T ss_pred HHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHH
Confidence 99998877777776 7999999999999999999999999999999999999999999999999999865 566789999
Q ss_pred HHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC-CCCCEEEEecCc
Q 022213 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSIS 251 (301)
Q Consensus 173 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~vi~~~s~S 251 (301)
|++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ .+.++..+. ..+++++++|+|
T Consensus 174 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~s 252 (404)
T 2o1b_A 174 VDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLS 252 (404)
T ss_dssp SCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEEST
T ss_pred HHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecc
Confidence 988887678899999999999999999999999999999999999999999998865 333444443 224689999999
Q ss_pred ccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
|.++++|+|+||++++ ++++++++.... ...+++.+.|.+
T Consensus 253 K~~g~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a 293 (404)
T 2o1b_A 253 KGYNMSGFRVGFAVGN--------KDMIQALKKYQTHTNAGMFGALQDA 293 (404)
T ss_dssp TTTTCGGGCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred hhccCchhheEeEecC--------HHHHHHHHHHHhhccCCCCHHHHHH
Confidence 9999999999999873 257777776543 234677777765
No 27
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=7.8e-38 Score=286.32 Aligned_cols=278 Identities=17% Similarity=0.172 Sum_probs=216.9
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 92 (301)
+.++....++.++.+.+...+...+..+.++|+|++|+| +..+.+++++.+.+++.+.... ....|.+..|..++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~ 87 (413)
T 3t18_A 9 KRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEKDYRKI 87 (413)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCHHHHHH
T ss_pred hhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCHHHHHH
Confidence 566667788899998776544332223568999999997 2223577888888887653321 23479888899999999
Q ss_pred HHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHH
Q 022213 93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (301)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (301)
+++++.+..+.. ++++|++|+|+++++..++++++++||+|+++.|+|..|...++..|.+++.+++..++ +.+|++.
T Consensus 88 la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~ 165 (413)
T 3t18_A 88 VIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDV 165 (413)
T ss_dssp HHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHH
T ss_pred HHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHH
Confidence 999997654322 44599999999999999999999999999999999999999999999999999985443 7799999
Q ss_pred HHhhccc----Ccc-EEEEcCC-CCCcccCCCHHHHHHHHHHHH------hCCCeEEEccCCcccccCCCCCCCcc-ccC
Q 022213 173 VEALADK----NTA-AMVIINP-GNPCGNVFTYHHLQEIAEMAR------KLRVMVVADEVYGHLTFGSIPYTPMG-LFG 239 (301)
Q Consensus 173 l~~~~~~----~~~-~v~l~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~ii~D~~y~~~~~~~~~~~~~~-~~~ 239 (301)
|++.+++ +++ ++++++| |||||.+++.+++++|+++|+ +||+++|+||+|.++.+++....++. .+.
T Consensus 166 l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 245 (413)
T 3t18_A 166 YKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFS 245 (413)
T ss_dssp HHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGT
T ss_pred HHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHh
Confidence 9998875 677 6788899 999999999999999999999 89999999999999998765544432 222
Q ss_pred C-CCC--EEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcc-----cCCCccccccc
Q 022213 240 S-IVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-----YSDIPTFIQVC 299 (301)
Q Consensus 240 ~-~~~--vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~q~~ 299 (301)
. ..+ +|+++||||.|+++|+|+||++++..+ ++++++++..... ..+++.++|.+
T Consensus 246 ~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 308 (413)
T 3t18_A 246 NLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSS-----KEIIEEFEASLAHSARCNWSNGTHAAQNI 308 (413)
T ss_dssp TCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESC-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHH
T ss_pred hcCCCeeEEEEEecCccCCCcCcCcEEEEEecCC-----HHHHHHHHHHHHHhhhccccCCChHHHHH
Confidence 2 234 589999999999999999999974211 3577777665321 23466677655
No 28
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.6e-37 Score=286.14 Aligned_cols=244 Identities=20% Similarity=0.234 Sum_probs=207.4
Q ss_pred hcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 022213 18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97 (301)
Q Consensus 18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 97 (301)
...+++.++.+...... +...+++++|+|+.|+|. +++++.+.+++.+++.......|++..|..++|+++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~-~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~ 95 (437)
T 3g0t_A 21 KDLGMASIRDLVALVTN-LEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFA 95 (437)
T ss_dssp SCGGGCCHHHHHHHHHH-HHHHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHH
T ss_pred hcCCCcHHHHHHHHHHH-HHHhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHH
Confidence 34556778877654432 223347899999999963 6778999999998887544357999889999999999999
Q ss_pred hhhCCCCCCCCCEEEcCCHHHHHHHHHHHhc--CCCC--EEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHH
Q 022213 98 SRDLPYKLSADDVYVTLGCKQAVEVILSVLA--RPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (301)
Q Consensus 98 ~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~--~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (301)
.+.++..+++++|++|+|++++++.++++++ ++|| +|+++.|+|.++...++..|.+++.++++ ++++.+|++.+
T Consensus 96 ~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l 174 (437)
T 3g0t_A 96 KLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKL 174 (437)
T ss_dssp HHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHH
T ss_pred HHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHH
Confidence 9888888889999999999999999999999 9999 99999999999999999999999999986 45677899999
Q ss_pred Hhhc-ccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCC----Cc-cccCC-CCCEEE
Q 022213 174 EALA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT----PM-GLFGS-IVPVIT 246 (301)
Q Consensus 174 ~~~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~----~~-~~~~~-~~~vi~ 246 (301)
++.+ +.+++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.... ++ ..+.. .+++++
T Consensus 175 ~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 254 (437)
T 3g0t_A 175 ESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYIL 254 (437)
T ss_dssp HHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEE
T ss_pred HHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEE
Confidence 9999 67889999999999999999999999999999999999999999999888632211 11 33433 567899
Q ss_pred EecCcccCCCCcceeEEEEee
Q 022213 247 LGSISKRWLVPGWRFGWLVTN 267 (301)
Q Consensus 247 ~~s~SK~~~~~G~rvG~~~~~ 267 (301)
++|+||.++++|+|+||++++
T Consensus 255 ~~s~sK~~~~~G~r~G~~~~~ 275 (437)
T 3g0t_A 255 ALSSSKAFSYAGQRIGVLMIS 275 (437)
T ss_dssp EEESTTTTSCGGGCCEEEEEC
T ss_pred EEcCccCCCCccceeEEEEEC
Confidence 999999999999999999985
No 29
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=5.6e-37 Score=279.64 Aligned_cols=247 Identities=21% Similarity=0.282 Sum_probs=211.6
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CCEEEcCCHHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVE 121 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~ 121 (301)
.+|+|+.|+|. .+++++.+.+++.+++.......|++..|..++++++++++.+.++..+++ ++|++|+|+++++.
T Consensus 40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 48999999976 266778899999988875434468888899999999999999888877766 79999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCC----CCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCC
Q 022213 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP----ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (301)
Q Consensus 122 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 197 (301)
.++++++++||+|+++.|+|.++...++..|.+++.+++.. ++++.+|++.+++.++++++++++++|+||||.++
T Consensus 117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~ 196 (407)
T 3nra_A 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY 196 (407)
T ss_dssp HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence 99999999999999999999999999999999999999843 35677999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC--CCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG--SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~--~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~ 275 (301)
+.+++++|+++|++||+++|+|++|..+.+++..+.++..++ ..++++++.|+||.++++|+|+||++++
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-------- 268 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-------- 268 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC--------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC--------
Confidence 999999999999999999999999999999877666666654 3457899999999999999999999973
Q ss_pred hhHHHHHHhhhc-ccCCCcccccccC
Q 022213 276 SGIIDSIKDCLS-IYSDIPTFIQVCE 300 (301)
Q Consensus 276 ~~~~~~~~~~~~-~~~~~~~~~q~~~ 300 (301)
++++++++.... ...+++.+.|.++
T Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~a~ 294 (407)
T 3nra_A 269 RAIIARMEKLQAIVSLRAAGYSQAVL 294 (407)
T ss_dssp HHHHHHHHHHHHHHTSSSCHHHHGGG
T ss_pred HHHHHHHHHHHhhhccCCChHHHHHH
Confidence 257777776644 3345566777653
No 30
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.8e-37 Score=284.41 Aligned_cols=283 Identities=16% Similarity=0.140 Sum_probs=217.7
Q ss_pred cccccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 022213 9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 87 (301)
|....+.+.....++.++.+.+...+...+..+.++|+|+.|+|. ..+.+++++.+.+++.+.... ....|++..|..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~ 83 (418)
T 3rq1_A 5 TSVAAKHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIP 83 (418)
T ss_dssp CCCSCTTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCH
T ss_pred hhhhHhhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChH
Confidence 444456667778888899887766554333345689999999871 123577888888887654322 233799888999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCC
Q 022213 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167 (301)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 167 (301)
+||+++++++...++.. .+++|++|+|+++++..++++++++||+|+++.|+|.+|...++..|.+++.+++..++ +.
T Consensus 84 ~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~ 161 (418)
T 3rq1_A 84 DFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NN 161 (418)
T ss_dssp HHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SS
T ss_pred HHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CC
Confidence 99999999997654322 23399999999999999999999999999999999999999999999999999985544 67
Q ss_pred CCHHHHHhhccc----Ccc-EEEEcCC-CCCcccCCCHHHHHHHHHHHH------hCCCeEEEccCCcccccCCCCCCCc
Q 022213 168 VDLDAVEALADK----NTA-AMVIINP-GNPCGNVFTYHHLQEIAEMAR------KLRVMVVADEVYGHLTFGSIPYTPM 235 (301)
Q Consensus 168 ~~~~~l~~~~~~----~~~-~v~l~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~ii~D~~y~~~~~~~~~~~~~ 235 (301)
+|++.+++.+++ +++ ++++++| |||||.+++.+++++|+++|+ +||+++|+||+|.++.+++....++
T Consensus 162 ~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 241 (418)
T 3rq1_A 162 FNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF 241 (418)
T ss_dssp BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred cCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence 999999998874 566 7788899 999999999999999999999 8999999999999988765432222
Q ss_pred c-ccCC-CCC--EEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcc-----cCCCccccccc
Q 022213 236 G-LFGS-IVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-----YSDIPTFIQVC 299 (301)
Q Consensus 236 ~-~~~~-~~~--vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~q~~ 299 (301)
. .+.. .++ +|+++||||.|+++|+|+||+++...+ ++++++++..... ..+++.++|.+
T Consensus 242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 309 (418)
T 3rq1_A 242 FNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDD-----EEIADEFFEVNKSTSRATWSNICRPAMRT 309 (418)
T ss_dssp GGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESS-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHH
T ss_pred HHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCC-----HHHHHHHHHHHHHHHhhccCCCchHHHHH
Confidence 2 2221 234 689999999999999999999873211 3577777665321 23466676654
No 31
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-37 Score=280.29 Aligned_cols=260 Identities=20% Similarity=0.304 Sum_probs=210.4
Q ss_pred CCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhh
Q 022213 20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSR 99 (301)
Q Consensus 20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 99 (301)
.+++.++.+.+.+ +.+. .++ ++|+|+.|+|. +++|+.+.+++.+.+. ....|++..|..++|+++++++.+
T Consensus 4 ~~~~~~~~~~~~~-~~~~-~~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~ 74 (376)
T 3ezs_A 4 FEPYPFERLRALL-KEIT-PKK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKR 74 (376)
T ss_dssp CCCCHHHHHHHHH-TTCC-CSS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHH-Hhhh-ccC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHH
Confidence 3556677776543 3332 235 99999999963 5678889999887763 345799888999999999999988
Q ss_pred hCCCCCCCCCEEEcCCHHHHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 100 DLPYKLSADDVYVTLGCKQAVEVILSVLARP--GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 100 ~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
.++..+++++|++|+|+++++..++++++++ ||+|+++.|+|.++...++..|.+++.++++...++.+ .+++.+
T Consensus 75 ~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~~~~ 151 (376)
T 3ezs_A 75 RFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP---SLNEKE 151 (376)
T ss_dssp HHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---CCCHHH
T ss_pred HhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---hHHhhh
Confidence 7787778999999999999999999999999 99999999999999999999999999999866545433 455555
Q ss_pred ccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC-----CCCCEEEEecCcc
Q 022213 178 DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-----SIVPVITLGSISK 252 (301)
Q Consensus 178 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-----~~~~vi~~~s~SK 252 (301)
.++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.....+...+ ..++++++.|+||
T Consensus 152 ~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 231 (376)
T 3ezs_A 152 LQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSK 231 (376)
T ss_dssp HHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTT
T ss_pred ccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchh
Confidence 56789999999999999999999999999999999999999999999988763322222111 3467899999999
Q ss_pred cCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcc-cCCCccccccc
Q 022213 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQVC 299 (301)
Q Consensus 253 ~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~ 299 (301)
.++++|+|+||++++ ++++++++..... ..+.+.+.|.+
T Consensus 232 ~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a 271 (376)
T 3ezs_A 232 RSSAPGLRSGFIAGD--------SRLLEKYKAFRAYLGYTSANAIQKA 271 (376)
T ss_dssp TTTCGGGCCEEEEEC--------HHHHHHHHHHHTTTCCCCCHHHHHH
T ss_pred ccCCccceeEEEeeC--------HHHHHHHHHHHhhhcCCCChHHHHH
Confidence 999999999999873 3577888776543 34567777765
No 32
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=3.4e-36 Score=274.73 Aligned_cols=274 Identities=17% Similarity=0.292 Sum_probs=222.9
Q ss_pred cccccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC--CCCCCCCCCCC
Q 022213 9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGI 86 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~ 86 (301)
|....+.+.+..+++.++.+.+...+ + +..+.++|+|+.|.|.. ...+++.+.+++.++++.. ... |++..|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~ 77 (407)
T 2zc0_A 3 YTKYLAGRANWIKGSALADVMKKASE-L-QKKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPANGI 77 (407)
T ss_dssp GGGGSCGGGGGCCCCHHHHHHHHHHH-H-HHSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCC
T ss_pred chhhhhhhhccCCchHHHHHHHhhhc-c-cCCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCCCCC
Confidence 44556777778888888887765432 1 11255899999998763 2446778899998888753 234 8887899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCC
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (301)
.++|+++++++.+.+|..+++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|.+++.++++.+
T Consensus 78 ~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~--- 154 (407)
T 2zc0_A 78 PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND--- 154 (407)
T ss_dssp HHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---
T ss_pred HHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---
Confidence 99999999999887777778899999999999999999999999999999999999999999999999999987542
Q ss_pred CCCHHHHHhhcc----c--CccEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC
Q 022213 167 EVDLDAVEALAD----K--NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (301)
Q Consensus 167 ~~~~~~l~~~~~----~--~~~~v-~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~ 239 (301)
++|++.+++.++ + +++++ ++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+++..+.++..++
T Consensus 155 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 234 (407)
T 2zc0_A 155 GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD 234 (407)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC
T ss_pred CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC
Confidence 389999999887 5 67776 4689999999999999999999999999999999999999988765555666665
Q ss_pred CCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
..+++++++|+||.++ +|+|+||++++. +++++++.... ...+++++.|.+
T Consensus 235 ~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 286 (407)
T 2zc0_A 235 NEGRVIVAGTLSKVLG-TGFRIGWIIAEG--------EILKKVLMQKQPIDFCAPAISQYI 286 (407)
T ss_dssp SSCCEEEEEESTTTTC-TTSCCEEEECCH--------HHHHHHHHHHTTTTSSSCHHHHHH
T ss_pred CCCCEEEEcccccccC-CCcceEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHH
Confidence 5568999999999998 999999999842 47777776544 233556777654
No 33
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=1.4e-36 Score=279.36 Aligned_cols=246 Identities=25% Similarity=0.412 Sum_probs=209.5
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-CEEEcCCHHH
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ 118 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~ 118 (301)
+++|+|+.|.+. +++++.+.+++.++++.. ....|++..|..++|+++++++.+.+|..++++ +|++|+|+++
T Consensus 37 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~ 112 (429)
T 1yiz_A 37 YKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYE 112 (429)
T ss_dssp HCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred CCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHH
Confidence 579999999864 557789999999988652 234788878999999999999988777677888 9999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCC--------CCCCCHHHHHhhcccCccEEEEcCCC
Q 022213 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER--------NWEVDLDAVEALADKNTAAMVIINPG 190 (301)
Q Consensus 119 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~v~l~~p~ 190 (301)
+++.++++++++||+|+++.|+|.++...++..|.+++.++++.+. ++.+|++.|++.++++++++++++|+
T Consensus 113 a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~ 192 (429)
T 1yiz_A 113 ALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPH 192 (429)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCC
Confidence 9999999999999999999999999999999999999999986543 56799999999998888999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC-CCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+. ..++++++.|+||.++++|+|+||+++++
T Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~- 271 (429)
T 1yiz_A 193 NPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE- 271 (429)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH-
T ss_pred CCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH-
Confidence 9999999999999999999999999999999999998765555555553 34578999999999999999999999843
Q ss_pred CCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 270 NGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
+++++++.... ...+.+++.|.+
T Consensus 272 -------~~~~~l~~~~~~~~~~~~~~~~~a 295 (429)
T 1yiz_A 272 -------ALLKNLQMVHQNCVYTCATPIQEA 295 (429)
T ss_dssp -------HHHHHHHHHHHTTTCCCCHHHHHH
T ss_pred -------HHHHHHHHHHhhcccCCChHHHHH
Confidence 47777766543 234567777754
No 34
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=3e-37 Score=278.67 Aligned_cols=242 Identities=20% Similarity=0.288 Sum_probs=209.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
+++++|+|+.|++ .+++++.+.+++.+++... ...|++ .| .++|+++++++.+.++..+++++|++|+|++++
T Consensus 21 ~g~~~idl~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a 93 (377)
T 3fdb_A 21 YGQGVLPLWVAES----DFSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG 93 (377)
T ss_dssp SCTTSEECCSSCC----CSCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred cCCCeeeecccCC----CCCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence 4789999999985 3678899999999988753 347888 77 899999999999888878889999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCH
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 199 (301)
++.++++++++||+|+++.|+|.++...++..|.+++.++++.+ +|++.+++.++++++++++++|+||||.+++.
T Consensus 94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~ 169 (377)
T 3fdb_A 94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAP 169 (377)
T ss_dssp HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCH
T ss_pred HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999998543 89999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCcccccCC-CCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhH
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~-~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~ 278 (301)
+++++|+++|++||+++|+|++|..+.+++ ....++..+...++++++.|+||.++++|+|+||+++++ +++
T Consensus 170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~ 242 (377)
T 3fdb_A 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSD 242 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHH
Confidence 999999999999999999999999999876 555555554445678999999999999999999998754 357
Q ss_pred HHHHHhhhc-ccCCCccccccc
Q 022213 279 IDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 279 ~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
+++++.... ...+++.+.|.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~a 264 (377)
T 3fdb_A 243 AEHWQQLSPVIKDGASTLGLIA 264 (377)
T ss_dssp HHHHHHSCHHHHCCCCHHHHHH
T ss_pred HHHHHHHHHhhcCCCCHHHHHH
Confidence 777776543 234667777754
No 35
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5e-37 Score=282.26 Aligned_cols=267 Identities=19% Similarity=0.258 Sum_probs=217.2
Q ss_pred ccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC--CCCCCCCCCCCHHH
Q 022213 12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPA 89 (301)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~l 89 (301)
..+.+.+..+.+.++++.+. ..++++|+|+.|.|+. .+.+++.+.+++.++++.. ....|++..|..++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l 90 (425)
T 1vp4_A 20 KISKIGQNMKSSIIREILKF-------AADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVL 90 (425)
T ss_dssp HCCHHHHTCCCCCHHHHTTT-------TTSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHH
T ss_pred hhhhhhhcCCCcHHHHHHHh-------ccCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHH
Confidence 34556666777777766531 1256899999998752 2346778899998887642 13479888899999
Q ss_pred HHHHHHHHhhhCCCC-CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCC
Q 022213 90 RRAIADYLSRDLPYK-LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (301)
Q Consensus 90 r~~ia~~l~~~~~~~-~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (301)
|+++++++.+.+|.. +++++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.++++.+ ++
T Consensus 91 r~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~ 167 (425)
T 1vp4_A 91 KQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GM 167 (425)
T ss_dssp HHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EE
T ss_pred HHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CC
Confidence 999999997765766 77899999999999999999999999999999999999999999999999999988542 38
Q ss_pred CHHHHHhhccc--------CccEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC
Q 022213 169 DLDAVEALADK--------NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (301)
Q Consensus 169 ~~~~l~~~~~~--------~~~~v-~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~ 239 (301)
|++.+++.+++ +++++ ++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++..++
T Consensus 168 d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 247 (425)
T 1vp4_A 168 DLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG 247 (425)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH
T ss_pred CHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhC
Confidence 99999988865 67777 4789999999999999999999999999999999999999988765555665555
Q ss_pred CCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
..+++|+++|+||.++ +|+|+||++++. +++++++.... ...+++.+.|.+
T Consensus 248 ~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 299 (425)
T 1vp4_A 248 GPERVVLLNTFSKVLA-PGLRIGMVAGSK--------EFIRKIVQAKQSADLCSPAITHRL 299 (425)
T ss_dssp CTTTEEEEEESTTTTC-GGGCEEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred CCCCEEEEeccccccc-cccceEEEeeCH--------HHHHHHHHHhhhhcCCCCHHHHHH
Confidence 5567899999999999 999999999842 47777766543 233567777765
No 36
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.1e-35 Score=268.18 Aligned_cols=258 Identities=23% Similarity=0.398 Sum_probs=213.8
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
+.+.+..+++.++++.+...... ..++++|+|+.|.|. ++.++.+.+++.+.++.. ...|++..|..++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~l 75 (370)
T 2z61_A 3 SKRLLNFESFEVMDILALAQKLE--SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKI 75 (370)
T ss_dssp CHHHHHCCCCTTHHHHHHHHHHH--HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred hhhhhhccccHHHHHHHHHHHHH--hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHH
Confidence 35666778888888876554321 236789999999974 455788999999888753 34798878999999999
Q ss_pred HHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHH
Q 022213 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (301)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (301)
++++.+.++..+++++|++|+|++++++.++++++++||+|++++|+|.++...++..|.+++.++ +|+++|
T Consensus 76 a~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l 147 (370)
T 2z61_A 76 SELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESL 147 (370)
T ss_dssp HHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHH
T ss_pred HHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHH
Confidence 999998888888899999999999999999999999999999999999999999999999998876 689999
Q ss_pred HhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC-CCCCEEEEecCcc
Q 022213 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISK 252 (301)
Q Consensus 174 ~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~vi~~~s~SK 252 (301)
++.++++++++++++|+||||.+++.+ |+++|++||+++|+||+|..+.+++ .+.++..+. ..++++++.|+||
T Consensus 148 ~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK 222 (370)
T 2z61_A 148 EEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSK 222 (370)
T ss_dssp HHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTT
T ss_pred HHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChh
Confidence 999988888999999999999999965 8899999999999999999988865 334444442 3457899999999
Q ss_pred cCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 253 ~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
.++++|+|+||+++++ +++++++.... ...+++.+.|.+
T Consensus 223 ~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a 262 (370)
T 2z61_A 223 LYAMTGWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYA 262 (370)
T ss_dssp TTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHH
T ss_pred ccCCccceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHH
Confidence 9999999999999843 47777776543 234667777754
No 37
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=7.4e-36 Score=276.16 Aligned_cols=274 Identities=19% Similarity=0.230 Sum_probs=213.7
Q ss_pred ccchhhhcCCcccHH-HHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhc----CCCCCCCCCCCC
Q 022213 12 EDKQEHKAAPAVTVK-TSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----GKFNCYATNSGI 86 (301)
Q Consensus 12 ~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~ 86 (301)
......+..++...+ .+...........+++++|+|+.|+| .++.++.+.+++.+++.. .....|++..|.
T Consensus 38 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~ 113 (449)
T 3qgu_A 38 QRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDT----TEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQ 113 (449)
T ss_dssp CCCHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCC----CCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCC
T ss_pred hhhHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCC----CCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCc
Confidence 344555566665443 55544443333345788999999985 467889999999988873 345579888899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCce----------EE
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE----------VR 156 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~----------~~ 156 (301)
.+||+++++++. ++.++++++|++|+|+++++..+ .+++++||+|++++|+|.++...++..|.+ ++
T Consensus 114 ~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~ 190 (449)
T 3qgu_A 114 GALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIE 190 (449)
T ss_dssp HHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEE
T ss_pred HHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeE
Confidence 999999999997 67778889999999999999998 888899999999999999999999999988 99
Q ss_pred EeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcc
Q 022213 157 HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236 (301)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~ 236 (301)
.++++...++..+++++ .+++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++.
T Consensus 191 ~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 265 (449)
T 3qgu_A 191 YMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIY 265 (449)
T ss_dssp EEECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGG
T ss_pred EEecccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHh
Confidence 99987665665665432 4688999999999999999999999999999999999999999999998876666666
Q ss_pred ccCC-CCCEEEEecCcccCCCCcceeEEEEeeCCCCccc--chhHHHHHHhhh-cccCCCccccccc
Q 022213 237 LFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ--KSGIIDSIKDCL-SIYSDIPTFIQVC 299 (301)
Q Consensus 237 ~~~~-~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~q~~ 299 (301)
.++. .+++|++.||||.|+++|+|+||+++++.- +. ...+...+.... ....+++.+.|.+
T Consensus 266 ~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 330 (449)
T 3qgu_A 266 EIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKAL--KYANGEPVHADWNRVMTTCFNGASNIVQAG 330 (449)
T ss_dssp GSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTC--BCTTSCBHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred hccCCCCcEEEEecchhhcCCccceeEEEecCHHH--HhhhhhhHHHHHHHHhhcccCCCCHHHHHH
Confidence 6654 356899999999999999999999986532 21 001122333332 2234677777764
No 38
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=2.5e-36 Score=273.81 Aligned_cols=246 Identities=18% Similarity=0.248 Sum_probs=210.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
.++++|+|+.|+| .+++++.+.+++.+++... ...|++. ..++++++++++.+.++..+++++|++|+|++++
T Consensus 25 ~g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a 97 (391)
T 3dzz_A 25 LKEKELPMWIAEM----DFKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPA 97 (391)
T ss_dssp CCTTCEECCSSCC----SSCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHH
T ss_pred cCCCceeccccCC----CCCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHH
Confidence 3678999999985 4778899999999988754 3467764 6899999999999888877889999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecC-CCCCCCCCHHHHHhhcc-cCccEEEEcCCCCCcccCC
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVF 197 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~ 197 (301)
+..++++++++||+|+++.|+|.++...++..|.+++.++++ ....|.+|++.+++.++ .+++++++++|+||||.++
T Consensus 98 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~ 177 (391)
T 3dzz_A 98 ISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAW 177 (391)
T ss_dssp HHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCccc
Confidence 999999999999999999999999999999999999999875 34456689999999997 6889999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC--CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~ 275 (301)
+.+++++|+++|++||+++|+|++|..+.+.+..+.++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 178 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~------ 251 (391)
T 3dzz_A 178 SEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNP------ 251 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSH------
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCH------
Confidence 9999999999999999999999999999988766667766653 35789999999999999999999998642
Q ss_pred hhHHHHHHhhhc--ccCCCccccccc
Q 022213 276 SGIIDSIKDCLS--IYSDIPTFIQVC 299 (301)
Q Consensus 276 ~~~~~~~~~~~~--~~~~~~~~~q~~ 299 (301)
+++++++.... ...+++.+.|.+
T Consensus 252 -~~~~~~~~~~~~~~~~~~~~~~~~a 276 (391)
T 3dzz_A 252 -DLRARAEESFFLAGIGEPNLLAIPA 276 (391)
T ss_dssp -HHHHHHHHHHHHHTCSSCCTTHHHH
T ss_pred -HHHHHHHHHHHhhccCCCCHHHHHH
Confidence 47777776642 223566666654
No 39
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=1.3e-36 Score=275.01 Aligned_cols=246 Identities=15% Similarity=0.272 Sum_probs=210.1
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
+++++|+|+.|++ .+++++.+.+++.+++... ...|++. ..++++++++++.+.++..+++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 94 (383)
T 3kax_A 22 KNEELIHAWIADM----DFEVPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPA 94 (383)
T ss_dssp SSSCCEECCCSSC----SSCCCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCeeecccccC----CCCCCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence 3578999999985 4778899999999988753 3467664 6799999999999888877889999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCC-CCCCCHHHHHhhcccCccEEEEcCCCCCcccCCC
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 198 (301)
++.++++++++||+|+++.|+|.++...++..|.+++.+++++++ +|.+|++++++.++++++++++++|+||||.+++
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 174 (383)
T 3kax_A 95 LSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWK 174 (383)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCC
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcC
Confidence 999999999999999999999999999999999999999876433 3678999999999878999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC--CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccch
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~ 276 (301)
.+++++|+++|++||+++|+|++|..+.+++..+.++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~ 247 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN-------E 247 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------H
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC-------H
Confidence 999999999999999999999999999988766666666654 3678999999999999999999999854 2
Q ss_pred hHHHHHHhhhcc--cCCCccccccc
Q 022213 277 GIIDSIKDCLSI--YSDIPTFIQVC 299 (301)
Q Consensus 277 ~~~~~~~~~~~~--~~~~~~~~q~~ 299 (301)
+++++++..... ..+++.+.|.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~a 272 (383)
T 3kax_A 248 KLRQAFTSIQYRQGFHGLNIFAYTA 272 (383)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHH
Confidence 477777766432 23566666654
No 40
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5e-36 Score=274.20 Aligned_cols=268 Identities=21% Similarity=0.324 Sum_probs=216.9
Q ss_pred cchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHH
Q 022213 13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92 (301)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 92 (301)
-+.+.+..+++.++.+.....+ .. ..++++|+|+.|+|. ++.++.+.+++ ++++.. ...|++..|..++|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~ 87 (409)
T 2gb3_A 16 FSDRVLLTEESPIRKLVPFAEM-AK-KRGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELREA 87 (409)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHH-HH-HTTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHH
T ss_pred HHHHhhcCCccHHHHHHHHHHH-HH-hcCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHH
Confidence 4566777788877776654432 21 236789999999973 45667888999 887543 3479887899999999
Q ss_pred HHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHH
Q 022213 93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (301)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (301)
+++++.+.++..+++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|.+++.++++.++++.+ ++.
T Consensus 88 la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~ 166 (409)
T 2gb3_A 88 FASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQN 166 (409)
T ss_dssp HHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTT
T ss_pred HHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHH
Confidence 9999998788778889999999999999999999999999999999999999999999999999999865345555 889
Q ss_pred HHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEEecCc
Q 022213 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSIS 251 (301)
Q Consensus 173 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~S 251 (301)
|++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++. ..++ +.. .+++++++|+|
T Consensus 167 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~~~~~~~~i~~~s~s 243 (409)
T 2gb3_A 167 LESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--LSIESDKVVVIDSVS 243 (409)
T ss_dssp GGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--GGSCCTTEEEEEEST
T ss_pred HHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--cccCCCCEEEEecch
Confidence 9998887889999999999999999999999999999999999999999999888652 3232 211 34689999999
Q ss_pred ccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcccCCCccccccc
Q 022213 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 299 (301)
|.++++|+|+||++++++ +++++++.......+++.+.|.+
T Consensus 244 K~~g~~G~r~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~a 284 (409)
T 2gb3_A 244 KKFSACGARVGCLITRNE-------ELISHAMKLAQGRLAPPLLEQIG 284 (409)
T ss_dssp TTTTCGGGCCEEEECSCH-------HHHHHHHHHHHHSCCCCHHHHHH
T ss_pred hccCCccceEEEEEECcH-------HHHHHHHHHHhccCCCCHHHHHH
Confidence 999999999999998541 47777766543221566676654
No 41
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=2.5e-36 Score=274.96 Aligned_cols=244 Identities=19% Similarity=0.300 Sum_probs=205.3
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHH
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (301)
+++|+|+.|++. +++++.+.+++.++++.. ...|++. ..++|+++++++.+.+|..+++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 589999999853 567889999999888643 3468764 899999999999887776678899999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCC-CCCCCHHHHHhhcc-cCccEEEEcCCCCCcccCCCH
Q 022213 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTY 199 (301)
Q Consensus 122 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~ 199 (301)
.++++++++||+|+++.|+|.++...++..|.+++.+++..++ .|.+|++.+++.++ .+++++++++|+||||.+++.
T Consensus 104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 183 (399)
T 1c7n_A 104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK 183 (399)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence 9999999999999999999999999999999999998875322 46689999999987 578889999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC--CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchh
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~ 277 (301)
+++++|+++|++||+++|+||+|..+.+++..+.++..++. .++++++.|+||.++++|+|+||++++++ +
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~ 256 (399)
T 1c7n_A 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-------D 256 (399)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-------H
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCH-------H
Confidence 99999999999999999999999999887655556665543 46789999999999999999999998542 4
Q ss_pred HHHHHHhhhccc--CCCccccccc
Q 022213 278 IIDSIKDCLSIY--SDIPTFIQVC 299 (301)
Q Consensus 278 ~~~~~~~~~~~~--~~~~~~~q~~ 299 (301)
++++++...... .+++.+.|.+
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~~~a 280 (399)
T 1c7n_A 257 IRERFTKSRDATSGMPFTTLGYKA 280 (399)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHH
T ss_pred HHHHHHHHHhhcccCCCCHHHHHH
Confidence 777776654422 2467777754
No 42
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=2e-36 Score=276.85 Aligned_cols=277 Identities=17% Similarity=0.142 Sum_probs=213.9
Q ss_pred hhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHHH
Q 022213 16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRS-GKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~p~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~~i 93 (301)
+.+..+++.++.+.+...+ ..++++|+|+.|.| +.....++++.+.+++.+.++. .....|++..|..++|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 8 EVPQAQPVLVFKLIADFRE----DPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp TCCCCCCCHHHHHHHHHHT----CCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred hCcccCCchHHHHHHHHhh----cCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence 4556778889988875543 13678999999986 3221234668899999888733 2455798888999999999
Q ss_pred HHHHhhhCCCCCCCCCEEE--cCCHHHHHHHHHH--HhcCCC-----CEEEEcCCCCcchHHHHHhcCce-EEEeecCCC
Q 022213 94 ADYLSRDLPYKLSADDVYV--TLGCKQAVEVILS--VLARPG-----ANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPE 163 (301)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~--~l~~~g-----d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~ 163 (301)
++++...++..+++++|++ |+|+++|++.+++ .++++| |+|+++.|+|.++...++..|.+ ++.+++..+
T Consensus 84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 163 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT 163 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence 9999665555557889999 9999999999965 446799 99999999999999999999999 999987544
Q ss_pred CCCCCCHHHHHhhccc---CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCC--CCCCCcccc
Q 022213 164 RNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLF 238 (301)
Q Consensus 164 ~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~--~~~~~~~~~ 238 (301)
+++.+|++.+++.+++ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++ ....++..+
T Consensus 164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 243 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243 (412)
T ss_dssp TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence 5678999999998864 55677789999999999999999999999999999999999999988764 123334333
Q ss_pred C-CCCCEEEEecCcccCCCCcceeEEEEee--CCCCcccchhHHHHHHhh-hcccCCCccccccc
Q 022213 239 G-SIVPVITLGSISKRWLVPGWRFGWLVTN--DPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQVC 299 (301)
Q Consensus 239 ~-~~~~vi~~~s~SK~~~~~G~rvG~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~ 299 (301)
. ..+++|++.|+||.++++|+|+||++++ +++ .+ +.++..++.. .....+++.+.|.+
T Consensus 244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a 305 (412)
T 1ajs_A 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPD-SI--LRVLSQMQKIVRVTWSNPPAQGARI 305 (412)
T ss_dssp HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCSHHHHH
T ss_pred hccCCcEEEEEecccccCCCCcceEEEEEecCCHH-HH--HHHHHHHHHHHhcccCCCChHHHHH
Confidence 2 2457899999999999999999999983 211 00 1245555553 23344467777765
No 43
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=7.6e-36 Score=270.59 Aligned_cols=244 Identities=18% Similarity=0.319 Sum_probs=208.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
+.++|+|+.|++ .+++++.+.+++.+++... ...|++ +..++++++++++.+.++..+++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~ 103 (391)
T 4dq6_A 31 TNDLLPMWVADM----DFKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI 103 (391)
T ss_dssp CSCSEECCSSSC----SSCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCC----CCCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence 578999999985 4778899999999988643 335655 569999999999999888778899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecC--CCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCC
Q 022213 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL--PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 198 (301)
+.++++++++||+|+++.|+|.++...++..|.+++.++++ .+.+|.+|++.+++.+++ ++++++++|+||||.+++
T Consensus 104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~ 182 (391)
T 4dq6_A 104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT 182 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence 99999999999999999999999999999999999999986 345577999999999987 889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC--CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccch
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~ 276 (301)
.+++++|+++|++||+++|+||+|..+.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~------- 255 (391)
T 4dq6_A 183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE------- 255 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH-------
T ss_pred HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCH-------
Confidence 999999999999999999999999999988766667666654 36789999999999999999999998542
Q ss_pred hHHHHHHhhhc-c-cCCCccccccc
Q 022213 277 GIIDSIKDCLS-I-YSDIPTFIQVC 299 (301)
Q Consensus 277 ~~~~~~~~~~~-~-~~~~~~~~q~~ 299 (301)
+++++++.... . ..+++.+.|.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a 280 (391)
T 4dq6_A 256 KDYKLLDDAFTRIDIKRNNCFSLVA 280 (391)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 47777766643 1 23556666654
No 44
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1.5e-35 Score=272.78 Aligned_cols=272 Identities=19% Similarity=0.235 Sum_probs=206.0
Q ss_pred hhhhcCCcc-cHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhc----CCCCCCCCCCCCHHH
Q 022213 15 QEHKAAPAV-TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----GKFNCYATNSGIPPA 89 (301)
Q Consensus 15 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~l 89 (301)
...+..++. ....+...........+++++|+|+.|++. ++.|+.+.+++.+++.. .....|++..|..+|
T Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l 103 (432)
T 3ei9_A 28 SNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPL 103 (432)
T ss_dssp HHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHH
T ss_pred hHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHH
Confidence 344455553 455555554444444457789999999864 77889999999988873 234578888899999
Q ss_pred HHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCc------------eEEE
Q 022213 90 RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQV------------EVRH 157 (301)
Q Consensus 90 r~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~ 157 (301)
|+++++|+.+ +.++++++|++|+|+++++.. +..++++||.|++++|+|.++...++..|. ++++
T Consensus 104 ~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 180 (432)
T 3ei9_A 104 RAAIAKTFYG--GLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEY 180 (432)
T ss_dssp HHHHHHHHHT--TTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEE
T ss_pred HHHHHHHHHc--cCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEE
Confidence 9999999974 455778999999999999987 477889999999999999999888887773 6778
Q ss_pred eecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccc
Q 022213 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (301)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~ 237 (301)
++++...++..+++. ..+++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..++..
T Consensus 181 ~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~-~~~~~~ 254 (432)
T 3ei9_A 181 MRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN-PRSIFE 254 (432)
T ss_dssp EECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC-CSSGGG
T ss_pred eccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC-CCChhh
Confidence 887655555555443 24688999999999999999999999999999999999999999999988753 334444
Q ss_pred cCC-CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 238 FGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 238 ~~~-~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
+.. .+++|+++||||.|+++|+|+||+++++.........++..++.... ...+++.++|.+
T Consensus 255 ~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 318 (432)
T 3ei9_A 255 IPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAG 318 (432)
T ss_dssp STTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHH
T ss_pred cCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHH
Confidence 432 35689999999999999999999998664200000113555555432 344567777764
No 45
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=3e-36 Score=275.61 Aligned_cols=272 Identities=15% Similarity=0.095 Sum_probs=201.0
Q ss_pred hhcCCcccHHHHHHHHHhhcccCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
+...|+++|..+.+...+ +..++|||++| +++. ..+..+.|+++..+.++.+..+.|.|..|+++||+++
T Consensus 24 v~~~p~d~i~~l~~~~~~-----d~~~kinLgvG~y~d~~g--~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~ai 96 (420)
T 4h51_A 24 IQAQAPDVIFDLAKRAAA-----AKGPKANLVIGAYRDEQG--RPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEA 96 (420)
T ss_dssp CCCCCCCHHHHHHHHHHH-----CCSSCEECCSCCCBCTTS--CBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred CCCCCCChHHHHHHHHhc-----CCCCCEEeecCcccCCCC--CCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHH
Confidence 556789999999876543 24458999999 3332 2355578889888777766666799999999999999
Q ss_pred HHHHhhhCCCCCCCCC--EEEcCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcchHHHHHhcCceE-EEeecCCCCCC
Q 022213 94 ADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYYEGIAQRKQVEV-RHFDLLPERNW 166 (301)
Q Consensus 94 a~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l----~~~gd~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~ 166 (301)
++++... ....++ .+-|.|+|.|+..++..+ .+|||+|++++|+|.+|..+++..|.+. ..++....+++
T Consensus 97 a~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~ 173 (420)
T 4h51_A 97 VKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV 173 (420)
T ss_dssp HHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred HHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence 9998542 233333 345888888887666655 4699999999999999999999999874 44444445567
Q ss_pred CCCHHHHHhhcc---cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCc--c-ccCC
Q 022213 167 EVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM--G-LFGS 240 (301)
Q Consensus 167 ~~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~--~-~~~~ 240 (301)
.+|.+.+.+.+. ++++++++++||||||.+++.++|++|+++|+++++++|+|++|.+|.|++....+. . ..+.
T Consensus 174 ~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~ 253 (420)
T 4h51_A 174 SLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR 253 (420)
T ss_dssp EECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred CCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh
Confidence 789888877663 456677888999999999999999999999999999999999999999875322221 1 1233
Q ss_pred CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhh-hcccCCCccccccc
Q 022213 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQVC 299 (301)
Q Consensus 241 ~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~ 299 (301)
..+++++.||||+|+++|+|+||++++...... ..++...+... ....++++...|.+
T Consensus 254 ~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~ 312 (420)
T 4h51_A 254 GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARL 312 (420)
T ss_dssp TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred CceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHH
Confidence 457899999999999999999999987653110 01122233333 23455777777654
No 46
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=2.2e-36 Score=276.56 Aligned_cols=278 Identities=17% Similarity=0.136 Sum_probs=210.9
Q ss_pred hhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHHH
Q 022213 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVD-AVRSGKFNCYATNSGIPPARRA 92 (301)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~p~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g~~~lr~~ 92 (301)
+++...+++.++.+.+.+.+. .++++|+|+.|+| +..+..++++.+.+++.+ .+.......|++..|..++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 81 (412)
T 1yaa_A 6 NNIELLPPDALFGIKQRYGQD----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN 81 (412)
T ss_dssp TTCCCCCCCTTHHHHHHHHTC----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred ccCcccCCCcHHHHHHHHhcC----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHH
Confidence 345567778888887655332 3578999999986 322233567889999988 7764445579888899999999
Q ss_pred HHHHHhhhCCCCCCCCCEEE--cCCHHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCC
Q 022213 93 IADYLSRDLPYKLSADDVYV--TLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (301)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (301)
+++++.+.++..+++++|++ |+|++++++.++ ..++++||+|+++.|+|.++...++..|.+++.+++...+++.+
T Consensus 82 ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 161 (412)
T 1yaa_A 82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSL 161 (412)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEE
T ss_pred HHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCcc
Confidence 99999765555567889999 999999999984 34457999999999999999999999999999998722235779
Q ss_pred CHHHHHhhcccC--cc-EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCC--CCCCCccccC-CCC
Q 022213 169 DLDAVEALADKN--TA-AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLFG-SIV 242 (301)
Q Consensus 169 ~~~~l~~~~~~~--~~-~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~--~~~~~~~~~~-~~~ 242 (301)
|++.+++.++++ .+ ++++++||||||.+++.+++++|+++|++||+++|+|++|..+.+++ ....++..+. ...
T Consensus 162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (412)
T 1yaa_A 162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLS 241 (412)
T ss_dssp CHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCC
Confidence 999999988653 24 44559999999999999999999999999999999999999988764 1222332222 123
Q ss_pred ---CEEEEecCcccCCCCcceeEEEE--e-e---CCCCcccchhHHHHHHhhh-cccCCCccccccc
Q 022213 243 ---PVITLGSISKRWLVPGWRFGWLV--T-N---DPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQVC 299 (301)
Q Consensus 243 ---~vi~~~s~SK~~~~~G~rvG~~~--~-~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~ 299 (301)
++|+++|+||.|+.+|+|+||++ + + ++. . .+.++.+++... ....+++.+.|.+
T Consensus 242 ~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a 305 (412)
T 1yaa_A 242 TVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKT-I--KPAVTSQLAKIIRSEVSNPPAYGAKI 305 (412)
T ss_dssp TTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred CCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHH-H--HHHHHHHHHHHHhhccCCCChHHHHH
Confidence 78999999999998899999998 5 1 210 0 011666776633 3344557777765
No 47
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=4.7e-36 Score=277.72 Aligned_cols=276 Identities=17% Similarity=0.189 Sum_probs=209.9
Q ss_pred hhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHH--hcCCCCCCCCCCCCHHHHH
Q 022213 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAV--RSGKFNCYATNSGIPPARR 91 (301)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~p~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~g~~~lr~ 91 (301)
..+...++++|+.+.+.+.++ ..+.+|+|+.|.| +..+..+..+.+.+++.+.. .......|.+..|..++|+
T Consensus 26 ~~~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~ 101 (448)
T 3meb_A 26 SGFPASPPDAILNLTVLYNAD----TNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLE 101 (448)
T ss_dssp TTCCCCCCCTTHHHHHHHHHC----CCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHH
T ss_pred hcCCCCCCChHHHHHHHHHhC----CCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHH
Confidence 456677888999988765432 3456899999998 43222345567777766555 1233557998889999999
Q ss_pred HHHHHHhhhCCCC---CCCCCEEE--cCCHHHHHHH--HHHHhcCCCCEEEEcCCCCcchHHHHH----hcCceEEEeec
Q 022213 92 AIADYLSRDLPYK---LSADDVYV--TLGCKQAVEV--ILSVLARPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDL 160 (301)
Q Consensus 92 ~ia~~l~~~~~~~---~~~~~i~~--t~g~~~al~~--~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~ 160 (301)
++++++. +.. +++++|++ |+|++++++. .+.+++++||+|++++|+|.++...++ ..|.+++.+++
T Consensus 102 ~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~ 178 (448)
T 3meb_A 102 AAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTY 178 (448)
T ss_dssp HHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECC
T ss_pred HHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEec
Confidence 9999993 322 22689999 9999999988 556677899999999999999999999 99999999998
Q ss_pred CCCC-CCCCCHHHHHhhccc---CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCC--CCCC
Q 022213 161 LPER-NWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTP 234 (301)
Q Consensus 161 ~~~~-~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~ 234 (301)
...+ ++.+|++.+++.+++ +++++++++||||||.+++.+++++|+++|++||+++|+|++|..+.+++. ...+
T Consensus 179 ~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~ 258 (448)
T 3meb_A 179 LRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFA 258 (448)
T ss_dssp BCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHH
T ss_pred cccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchh
Confidence 4444 678999999998874 466778899999999999999999999999999999999999999887641 1223
Q ss_pred cccc-CCCCCEEEEecCcccCCCCcceeEEE--Ee--------eCCCCcccchhHHHHHHhhh-cccCCCcccccccC
Q 022213 235 MGLF-GSIVPVITLGSISKRWLVPGWRFGWL--VT--------NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQVCE 300 (301)
Q Consensus 235 ~~~~-~~~~~vi~~~s~SK~~~~~G~rvG~~--~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~ 300 (301)
+..+ ....++|++.||||.|+++|+|+||+ ++ +++. . .+++++.++... ...++++.+.|.++
T Consensus 259 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~ 333 (448)
T 3meb_A 259 VRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-L--SAAMVSGMTLQIRKTWSMSAIHGAYIV 333 (448)
T ss_dssp HHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred HHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-H--HHHHHHHHHHHHhcccCCccHHHHHHH
Confidence 3322 23457899999999999999999998 55 3210 0 014666666543 34556777777653
No 48
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.4e-36 Score=277.75 Aligned_cols=275 Identities=15% Similarity=0.139 Sum_probs=198.3
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
.+++...++++|+.+.+.+.+. ..+++|+|+.|+|. +++.++.+.+++.++ .......|.+..|..+||+++
T Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~----~~~~~i~l~~g~~~---d~~~~~~v~~a~~~a-~~~~~~~y~~~~g~~~lr~~i 88 (409)
T 4eu1_A 17 QGPGSMGKPDPILGLGQDFRMD----PAKRKVNLSIGVYR---DDADQPFVLECVKQA-TLGTNMDYAPVTGIASFVEEA 88 (409)
T ss_dssp ----------CHHHHHHHHHHC----CCSSCEECCCSSCC---CTTSCCCCCHHHHTC-CCCSCCCCCCTTCCHHHHHHH
T ss_pred hhcCCCCCCChHHHHHHHHhhC----CCcCceeeeeeEEE---CCCCCEeecHHHHhc-CccccccCCCCCCcHHHHHHH
Confidence 3456677888888887765442 35789999999972 234444555666655 223455898888999999999
Q ss_pred HHHHhhhCCCCCCCCCEE--EcCCHHHHHHHHH---HHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCC
Q 022213 94 ADYLSRDLPYKLSADDVY--VTLGCKQAVEVIL---SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (301)
Q Consensus 94 a~~l~~~~~~~~~~~~i~--~t~g~~~al~~~~---~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (301)
++++....+..+++++|. .|.|+++++..+. ++++++||+|++++|+|.++...++..|.+++.+++..++++.+
T Consensus 89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (409)
T 4eu1_A 89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL 168 (409)
T ss_dssp HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence 999843221112367884 4899999988754 45568999999999999999999999999999998855567889
Q ss_pred CHHHHHhhccc---CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCC--CCCCcccc-CCCC
Q 022213 169 DLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLF-GSIV 242 (301)
Q Consensus 169 ~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~-~~~~ 242 (301)
|++.+++.+++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ +...
T Consensus 169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
T 4eu1_A 169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP 248 (409)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence 99999998852 345666799999999999999999999999999999999999999988652 12223222 3446
Q ss_pred CEEEEecCcccCCCCcceeEEE--EeeCCCCcccchhHHHHHHhhh-cccCCCccccccc
Q 022213 243 PVITLGSISKRWLVPGWRFGWL--VTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQVC 299 (301)
Q Consensus 243 ~vi~~~s~SK~~~~~G~rvG~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~ 299 (301)
++|+++||||.|+++|+|+||+ ++++++ . .+.++++++... ....+++.+.|.+
T Consensus 249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (409)
T 4eu1_A 249 NLIVAQSFSKNFGLYGHRCGALHISTASAE-E--AKRLVSQLALLIRPMYNNPPLYGAWV 305 (409)
T ss_dssp CCEEEEECTTTSSCGGGCCEEEEEECSSHH-H--HHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred cEEEEecCcccccCccCCceEEEEEeCCHH-H--HHHHHHHHHHHHhhhcCCCChHHHHH
Confidence 7899999999999999999997 554421 0 011556666543 2344666777765
No 49
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=2.1e-35 Score=267.29 Aligned_cols=256 Identities=27% Similarity=0.377 Sum_probs=206.7
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (301)
..+.+..+++.++.+.+... .+++|+|+.|.|. ++.++.+.+++.++++. ...|++..|..++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~l 70 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLAQ-------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREAL 70 (381)
T ss_dssp CGGGGGC---CHHHHHHHHH-------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHH
T ss_pred hhhhhhcCccHHHHHHHHHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHH
Confidence 44555666666666654322 2468999999863 56778999999988865 44798877999999999
Q ss_pred HHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecC--CCCCCCCCHH
Q 022213 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL--PERNWEVDLD 171 (301)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~ 171 (301)
++++ ++++++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.++++ ++ ++.+|++
T Consensus 71 a~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~ 143 (381)
T 1v2d_A 71 AEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLS 143 (381)
T ss_dssp HHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHH
T ss_pred HHhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHH
Confidence 9997 4577899999999999999999999999999999999999999999999999999875 22 3679999
Q ss_pred HHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCc
Q 022213 172 AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS 251 (301)
Q Consensus 172 ~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~S 251 (301)
.+++.++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+ +....++..+ ..++++++.|+|
T Consensus 144 ~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~s 221 (381)
T 1v2d_A 144 ALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAG 221 (381)
T ss_dssp HHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHH
T ss_pred HHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeech
Confidence 99999988889999999999999999999999999999999999999999999887 4334444433 345789999999
Q ss_pred ccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
|.++++|+|+||++++. ++++.++.... ...+++++.|.+
T Consensus 222 K~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a 262 (381)
T 1v2d_A 222 KRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAG 262 (381)
T ss_dssp HHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHH
T ss_pred hhcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHH
Confidence 99999999999999843 25566655432 234566677654
No 50
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.8e-36 Score=275.52 Aligned_cols=276 Identities=18% Similarity=0.183 Sum_probs=200.3
Q ss_pred hhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 022213 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD 95 (301)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (301)
+...+++.++.+...+.+ ..++++|+|+.|++ +..+..++++.+.+++.+.+.......|++..|..++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (396)
T 2q7w_A 5 ITAAPADPILGLADLFRA----DERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp CCCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHhc----cCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHH
Confidence 445677777776654332 12568999999984 2112235678899999888765455579888899999999999
Q ss_pred HHhhhCCCCCCCCCEEE--cCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHH
Q 022213 96 YLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLD 171 (301)
Q Consensus 96 ~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 171 (301)
++....+..+++++|++ |+|++++++.+++.+. ++||+|+++.|+|.++...++..|.+++.+++..++++.+|++
T Consensus 81 ~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 160 (396)
T 2q7w_A 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHH
Confidence 99654332245789998 9999999999998764 6999999999999999999999999999998854456779999
Q ss_pred HHHhhccc---CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCC-CCCCCccccCC-CCCEEE
Q 022213 172 AVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFGS-IVPVIT 246 (301)
Q Consensus 172 ~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~-~~~~~~~~~~~-~~~vi~ 246 (301)
.+++.+++ +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++ ....++..+.. .+++++
T Consensus 161 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (396)
T 2q7w_A 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEE
Confidence 99998865 35677889999999999999999999999999999999999999988753 12223333322 357899
Q ss_pred EecCcccCCCCcceeEEEEe--eCCCCcccchhHHHHHHhhh-cccCCCccccccc
Q 022213 247 LGSISKRWLVPGWRFGWLVT--NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQVC 299 (301)
Q Consensus 247 ~~s~SK~~~~~G~rvG~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~ 299 (301)
++|+||.++++|+|+||+++ ++++ .+ ++++..++... ....+++.+.|.+
T Consensus 241 ~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a 293 (396)
T 2q7w_A 241 ASSYSXNFGLYNERVGACTLVAADSE-TV--DRAFSQMKAAIRANYSNPPAHGASV 293 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred EEeccccccccccccceEEEEcCCHH-HH--HHHHHHHHHHHhhccCCCCcHHHHH
Confidence 99999999999999999986 2321 00 13555555432 2334457777764
No 51
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.5e-35 Score=269.11 Aligned_cols=242 Identities=20% Similarity=0.276 Sum_probs=200.5
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHH-HHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP-ARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
+++|+|+.|++. +++++.+.+++.+++... ...|++. ..+ +|+++++++.+.++..+++++|++|+|+++++
T Consensus 28 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al 100 (390)
T 1d2f_A 28 ADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV 100 (390)
T ss_dssp --CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred CCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence 479999999863 567889999999888643 3468774 678 99999999988888778899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCC-CCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCC
Q 022213 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~ 198 (301)
+.++++++++||+|+++.|+|.++...++..|.+++.++++.++ .|.+|++.+++.+++ +++++++++|+||||.+++
T Consensus 101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 180 (390)
T 1d2f_A 101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT 180 (390)
T ss_dssp HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence 99999999999999999999999999999999999999886543 466899999999876 7888888999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCC-CEEEEecCcccCCCCcceeEEEEeeCCCCcccchh
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV-PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~-~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~ 277 (301)
.+++++|+++|++||+++|+||+|..+.+++..+.++..++... + + +.|+||.++++|+|+||++++++ +
T Consensus 181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d-~-~~s~sK~~~~~G~r~G~~~~~~~-------~ 251 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWA-L-LTSGSKSFNIPALTGAYGIIENS-------S 251 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEE-E-EECSHHHHTCGGGCCEEEEECSH-------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHh-h-ccCccHhhcccChhheEEEECCH-------H
Confidence 99999999999999999999999999988766555655554321 2 3 99999999999999999998542 4
Q ss_pred HHHHHHhhhc--c-cCCCccccccc
Q 022213 278 IIDSIKDCLS--I-YSDIPTFIQVC 299 (301)
Q Consensus 278 ~~~~~~~~~~--~-~~~~~~~~q~~ 299 (301)
++++++.... . ..+++.+.|.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~a 276 (390)
T 1d2f_A 252 SRDAYLSALKGRDGLSSPSVLALTA 276 (390)
T ss_dssp HHHHHHHHHHTTSCCCSCCHHHHHH
T ss_pred HHHHHHHHHhhhcccCCCCHHHHHH
Confidence 7777766543 2 23566666654
No 52
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.4e-36 Score=279.47 Aligned_cols=248 Identities=18% Similarity=0.258 Sum_probs=201.0
Q ss_pred CCCeeeccCCCC-CCCCCCCChHHH--HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCC---EEEcC
Q 022213 41 PRPVVPLGYGDP-TAFPCFRTAVEA--EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD---VYVTL 114 (301)
Q Consensus 41 ~~~~i~l~~g~p-~~~p~~~~~~~~--~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~---i~~t~ 114 (301)
.+++|+|+.|+| . ++.++.+ .+++.+.+.......|++..|..++|+++++++.+.+ .++++++ |++|+
T Consensus 46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN 120 (430)
T ss_dssp TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence 357999999997 4 3334444 5555554432134579988899999999999998764 6677888 99999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-cCceEEEeecCCCCCCCCCHHHHHhhccc---CccEEEEcCCC
Q 022213 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPG 190 (301)
Q Consensus 115 g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~ 190 (301)
|++++++.++++++++||+|++++|+|.++...++. .|.+++.++++.++ +.+|++++++.+++ +++++++++|+
T Consensus 121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~ 199 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPN 199 (430)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence 999999999999999999999999999999999998 99999999886543 67999999998876 77889999999
Q ss_pred CCcccCCCHHHHHHHHHHHHh-----CCCeEEEccCCcccccCCCCCCCcc-ccCC-CCC---EEEEecCcccCCCCcce
Q 022213 191 NPCGNVFTYHHLQEIAEMARK-----LRVMVVADEVYGHLTFGSIPYTPMG-LFGS-IVP---VITLGSISKRWLVPGWR 260 (301)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~-----~~~~ii~D~~y~~~~~~~~~~~~~~-~~~~-~~~---vi~~~s~SK~~~~~G~r 260 (301)
||||.+++.+++++|+++|++ +|+++|+||+|..+.+++..+.++. .++. .++ +|+++|+||.|+++|+|
T Consensus 200 nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 279 (430)
T 2x5f_A 200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFR 279 (430)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGC
T ss_pred CCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCC
Confidence 999999999999999999999 9999999999999988765444543 4432 456 89999999999999999
Q ss_pred eEEEEeeCCCCcccchhHHHHHHhhhc-----ccCCCccccccc
Q 022213 261 FGWLVTNDPNGIFQKSGIIDSIKDCLS-----IYSDIPTFIQVC 299 (301)
Q Consensus 261 vG~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~~ 299 (301)
+||+++.+++ ++++++++.... ...+++.+.|.+
T Consensus 280 iG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~a 318 (430)
T 2x5f_A 280 VGFMTFGTSD-----QTTKEVLEAKVKGLIRSNISSGPLPTQSA 318 (430)
T ss_dssp CEEEEEBCCC-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred eEEEEEecCC-----HHHHHHHHHHHhhhhhcccCCCChHHHHH
Confidence 9999982211 247777766543 234677777765
No 53
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=6e-35 Score=262.55 Aligned_cols=234 Identities=21% Similarity=0.292 Sum_probs=196.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
+.+++|+|+.|++ .+++++.+.+++.+.+. ....|+. .+..++|+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~--~~~~y~~-~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a 96 (363)
T 3ffh_A 30 GLTKITKLSSNEN----PLGTSKKVAAIQANSSV--ETEIYPD-GWASSLRKEVADFY------QLEEEELIFTAGVDEL 96 (363)
T ss_dssp TCSCCEECSSCSC----TTCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred CCCceEEccCCCC----CCCCCHHHHHHHHHHHH--HhhcCCC-cchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence 3578999999985 36778899998887664 3446754 58899999999999 4678899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCH
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 199 (301)
++.++++++++||+|+++.|+|.++...++..|.+++.+++++ ++.+|++++++.++++++++++++|+||||.+++.
T Consensus 97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~ 174 (363)
T 3ffh_A 97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL 174 (363)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence 9999999999999999999999999999999999999999864 56799999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHH
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~ 279 (301)
+++++|++.|++ |+++|+|++|.++.+ +.....+......++++++.|+||.++++|+|+||++++ ++++
T Consensus 175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~ 244 (363)
T 3ffh_A 175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD--------KEII 244 (363)
T ss_dssp HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC--------HHHH
T ss_pred HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC--------HHHH
Confidence 999999988877 999999999999887 444444444455678999999999999999999999983 3588
Q ss_pred HHHHhhhcccCCCccccccc
Q 022213 280 DSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 280 ~~~~~~~~~~~~~~~~~q~~ 299 (301)
++++.... ..+.+.+.|.+
T Consensus 245 ~~l~~~~~-~~~~~~~~~~~ 263 (363)
T 3ffh_A 245 RQLNIVRP-PFNTTSIGQKL 263 (363)
T ss_dssp HHHHHTCC-SCCCBHHHHHH
T ss_pred HHHHHhCC-CCCCCHHHHHH
Confidence 88877655 33566666654
No 54
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=7.3e-36 Score=271.87 Aligned_cols=264 Identities=22% Similarity=0.289 Sum_probs=213.8
Q ss_pred cccccchhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC--CCCCCCCCCCC
Q 022213 9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGI 86 (301)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~ 86 (301)
|..+.+.+....+++.++.+.+.. ..+++|+|+.|.|+. .+.+++.+.+++.++++.. ....|++..|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~ 76 (397)
T 2zyj_A 6 WSEAFGKGAGRIQASTIRELLKLT-------QRPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTEGY 76 (397)
T ss_dssp HHHHSCGGGGGCCCCHHHHHHHHH-------TSTTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCC
T ss_pred HHHHhhhhhcccCchHHHHHHhhc-------cCCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCC
Confidence 444566667777777777766532 146799999998753 2345778888888877642 13478887899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCC
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (301)
.++|+++++++ ++++++|++|+|++++++.++++++++||+|+++.|+|.++...++..|.+++.++.+.+
T Consensus 77 ~~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~--- 147 (397)
T 2zyj_A 77 APLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE--- 147 (397)
T ss_dssp HHHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---
T ss_pred HHHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---
Confidence 99999999999 357789999999999999999999999999999999999999999999999999987542
Q ss_pred CCCHHHHHhhccc-CccEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC---
Q 022213 167 EVDLDAVEALADK-NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI--- 241 (301)
Q Consensus 167 ~~~~~~l~~~~~~-~~~~v-~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~--- 241 (301)
++|++.+++.+++ +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..++.+
T Consensus 148 ~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 227 (397)
T 2zyj_A 148 GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGY 227 (397)
T ss_dssp EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTC
T ss_pred CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCC
Confidence 3899999998876 77877 568999999999999999999999999999999999999998876555566555544
Q ss_pred CCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
+++++++|+||.++ +|+|+||++++. +++++++.... ...+++.+.|.+
T Consensus 228 ~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 277 (397)
T 2zyj_A 228 PGVIYLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQML 277 (397)
T ss_dssp CCEEEEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred CeEEEEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHH
Confidence 67899999999998 999999999842 47777766543 234557777764
No 55
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=2e-35 Score=264.66 Aligned_cols=237 Identities=18% Similarity=0.260 Sum_probs=201.7
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 38 ~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
..+++.+|+|+.|++ .+++++.+.+++.+.+.. ...|+. .+..++|+++++++ ++++++|++|+|++
T Consensus 12 ~~~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~ 78 (354)
T 3ly1_A 12 APSTDNPIRINFNEN----PLGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSS 78 (354)
T ss_dssp CCCSSSCEECSSCCC----SSCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHH
T ss_pred CCCCCceEEccCCCC----CCCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChH
Confidence 345789999999985 367889999999988763 446854 57889999999998 46788999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc--cCccEEEEcCCCCCccc
Q 022213 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIINPGNPCGN 195 (301)
Q Consensus 118 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~p~nptG~ 195 (301)
+++..++++++++||+|+++.|+|.++...++..|.+++.++++. ++.+|++.+++.++ ++++++++++|+||||.
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~ 156 (354)
T 3ly1_A 79 EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGT 156 (354)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCC
T ss_pred HHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCC
Confidence 999999999999999999999999999999999999999998753 46799999999998 68999999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC-CCEEEEecCcccCCCCcceeEEEEeeCCCCccc
Q 022213 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274 (301)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~-~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~ 274 (301)
+++.+++++|+++| ++|+++|+|++|..+.+++.....+...+.. +++++++|+||.++++|+|+||++++
T Consensus 157 ~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~------- 228 (354)
T 3ly1_A 157 ITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH------- 228 (354)
T ss_dssp CCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC-------
T ss_pred CcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC-------
Confidence 99999999999999 8999999999999988876544444444444 67899999999999999999999973
Q ss_pred chhHHHHHHhhhcccCCCccccccc
Q 022213 275 KSGIIDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~q~~ 299 (301)
++++++++..... .+++.+.|.+
T Consensus 229 -~~~~~~~~~~~~~-~~~~~~~~~a 251 (354)
T 3ly1_A 229 -PTVIALMGRYVAG-EKINFSGVDA 251 (354)
T ss_dssp -HHHHHHHGGGTTC-SCCCHHHHHH
T ss_pred -HHHHHHHHHhcCC-CCCCHHHHHH
Confidence 3588888877654 4667776654
No 56
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=1.1e-35 Score=270.12 Aligned_cols=274 Identities=19% Similarity=0.189 Sum_probs=209.2
Q ss_pred hhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 022213 16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (301)
Q Consensus 16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (301)
.++..+++.++.+.+.+.+. .++++|+|+.|+|. ..+..++++.+.+++.++++......|++..|..++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la 79 (394)
T 2ay1_A 4 NLKPQAPDKILALMGEFRAD----PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMG 79 (394)
T ss_dssp GCCCCCCCSHHHHHHHHHHC----CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHH
T ss_pred cCccCCCccHHHHHHHHHhC----CCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHH
Confidence 35677888898887765432 35789999999862 11224667889999988876545567988889999999999
Q ss_pred HHHhhhCCCCCCCCCEEE--cCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCH
Q 022213 95 DYLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170 (301)
Q Consensus 95 ~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (301)
+++... .+++++|++ |+|+++|++.+++.+.. +||+|+++.|+|.++...++..|.+++.+++..++++.+|+
T Consensus 80 ~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 156 (394)
T 2ay1_A 80 ELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDF 156 (394)
T ss_dssp HHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECH
T ss_pred HHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCH
Confidence 998432 236789999 99999999999988865 99999999999999999999999999999885445677999
Q ss_pred HHHHhhcccC---ccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCC-CCCCccccCC-CCCEE
Q 022213 171 DAVEALADKN---TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLFGS-IVPVI 245 (301)
Q Consensus 171 ~~l~~~~~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~-~~~~~~~~~~-~~~vi 245 (301)
+.+++.+++. ++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ...++..+.. .++++
T Consensus 157 ~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i 236 (394)
T 2ay1_A 157 EGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVL 236 (394)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEE
Confidence 9999988653 45677799999999999999999999999999999999999999887531 1112322221 34689
Q ss_pred EEecCcccCCCCcceeEEEEe--eCCCCcccchhHHHHHHhhh-cccCCCccccccc
Q 022213 246 TLGSISKRWLVPGWRFGWLVT--NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQVC 299 (301)
Q Consensus 246 ~~~s~SK~~~~~G~rvG~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~ 299 (301)
+++|+||.++++|+|+||+++ ++++ ++ ++++..++... ....+++.+.|.+
T Consensus 237 ~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~a 290 (394)
T 2ay1_A 237 IAASCSKNFGIYRERTGCLLALCADAA-TR--ELAQGAMAFLNRQTYSFPPFHGAKI 290 (394)
T ss_dssp EEEECTTTTTCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCCHHHHH
T ss_pred EEEeccCCCcCcCCccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHH
Confidence 999999999999999999997 3321 00 12334443322 2334457777754
No 57
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=1.4e-34 Score=263.92 Aligned_cols=241 Identities=18% Similarity=0.298 Sum_probs=187.8
Q ss_pred hhhhcCCccc-HHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC----CCCCCCCCCCCHHH
Q 022213 15 QEHKAAPAVT-VKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPA 89 (301)
Q Consensus 15 ~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~l 89 (301)
.+....+++. +.++...+........++++|+|+.|++. +++++.+.+++.++++.. ....|++..|..+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l 80 (400)
T 3asa_A 5 PHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPAL 80 (400)
T ss_dssp HHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHH
T ss_pred hhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHH
Confidence 3444444433 34444444332223346789999999863 567788889888877531 24579877899999
Q ss_pred HHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCce-EEEeecCCCCCCCC
Q 022213 90 RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPERNWEV 168 (301)
Q Consensus 90 r~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 168 (301)
|+++++++. ++. +++++|++|+|+++++..++. ++++||+|+++.|+|.++...++..|.+ ++.++++.+.++..
T Consensus 81 r~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 156 (400)
T 3asa_A 81 RQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFP 156 (400)
T ss_dssp HHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCC
T ss_pred HHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCccc
Confidence 999999974 343 678899999999999998764 4579999999999999999989999998 99998765444444
Q ss_pred CHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEE
Q 022213 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITL 247 (301)
Q Consensus 169 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~ 247 (301)
++++ . ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..++. .++++++
T Consensus 157 ~l~~---~--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (400)
T 3asa_A 157 EFPE---D--THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEI 231 (400)
T ss_dssp CCCT---T--CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEE
T ss_pred Chhh---c--cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEE
Confidence 4332 1 46889999999999999999999999999999999999999999998876544445555543 3468999
Q ss_pred ecCcccCCCCcceeEEEEeeC
Q 022213 248 GSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 248 ~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+|+||.|+++|+|+||+++++
T Consensus 232 ~s~sK~~g~~GlriG~~~~~~ 252 (400)
T 3asa_A 232 NSFSKPLGFAGIRLGWTVIPQ 252 (400)
T ss_dssp EECCGGGTTTTCCCEEEECCT
T ss_pred ecchhhcCCcchheeEEeeCh
Confidence 999999999999999999855
No 58
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=5.2e-35 Score=268.88 Aligned_cols=245 Identities=21% Similarity=0.353 Sum_probs=196.9
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhc----------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCC--CCCCC
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----------GKFNCYATNSGIPPARRAIADYLSRDLPYK--LSADD 109 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~--~~~~~ 109 (301)
.++|+|+.+... ++ ++.+.+++.+.... .....|+++.|..+||+++++++.+.++.. +++++
T Consensus 36 ~~~i~l~~~~~~----~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 36 NGVIQMGLAENQ----LC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp TSBEECSSCCCC----SS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred Cceeeeccccch----hh-HHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 478999987531 33 34777777643210 013479888899999999999998877755 77899
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-HhcCceEEEeecCCCCCCCCCHHHHHhhccc------Ccc
Q 022213 110 VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA-QRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTA 182 (301)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~ 182 (301)
|++|+|++++++.++++++++||+|+++.|+|.++...+ ...|.+++.++++.+++|.+|++.+++.+++ +++
T Consensus 111 i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 190 (428)
T 1iay_A 111 VVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVK 190 (428)
T ss_dssp CEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceE
Confidence 999999999999999999999999999999999987644 4679999999886556678999999988753 578
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC--------CCCEEEEecCcccC
Q 022213 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--------IVPVITLGSISKRW 254 (301)
Q Consensus 183 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~--------~~~vi~~~s~SK~~ 254 (301)
++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.|++..+.++..+.. .++++++.|+||.|
T Consensus 191 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~ 270 (428)
T 1iay_A 191 GLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM 270 (428)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS
T ss_pred EEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc
Confidence 8999999999999999999999999999999999999999998886544444444332 36789999999999
Q ss_pred CCCcceeEEEEeeCCCCcccchhHHHHHHhhhcccCCCccccccc
Q 022213 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 255 ~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 299 (301)
+++|+|+||++++++ +++++++..... .+++.++|.+
T Consensus 271 g~~Glr~G~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~a 307 (428)
T 1iay_A 271 GLPGFRVGIIYSFND-------DVVNCARKMSSF-GLVSTQTQYF 307 (428)
T ss_dssp SCGGGCEEEEEESCH-------HHHHHHHHHHTT-SCCCHHHHHH
T ss_pred CCCCceEEEEEeCCH-------HHHHHHHHHHhc-ccCCHHHHHH
Confidence 999999999998542 477777765442 3567777764
No 59
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=6e-35 Score=268.07 Aligned_cols=245 Identities=18% Similarity=0.260 Sum_probs=209.7
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
++++|+|+.|++ .++.++.+.+++.+++.... ..|++. ..++++++++++.+.++..+++++|++|+|+++|+
T Consensus 60 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~ 132 (421)
T 3l8a_A 60 NPELLQMWVADM----DFLPVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI 132 (421)
T ss_dssp CTTCEECCSSCC----CSCCCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeecccCCC----CCCCCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence 678999999985 47788999999999887533 356653 48999999999999888778899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecC-CCCCCCCCHHHHHhhcc-cCccEEEEcCCCCCcccCCC
Q 022213 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~ 198 (301)
+.++++++++||+|+++.|+|.++...++..|.+++.+++. .+.++.+|++.|++.++ ++++++++++|+||||.+++
T Consensus 133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~ 212 (421)
T 3l8a_A 133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD 212 (421)
T ss_dssp HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999986 45556789999999997 68899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC--CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccch
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~ 276 (301)
.+++++|+++|++||+++|+||+|..+.+++..+.++..+.. .++++.+.|+||.++++|+|+||++++++
T Consensus 213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~------- 285 (421)
T 3l8a_A 213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE------- 285 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH-------
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH-------
Confidence 999999999999999999999999999998776777766654 36789999999999999999999998642
Q ss_pred hHHHHHHhhhc-c-cCCCccccccc
Q 022213 277 GIIDSIKDCLS-I-YSDIPTFIQVC 299 (301)
Q Consensus 277 ~~~~~~~~~~~-~-~~~~~~~~q~~ 299 (301)
++++.++.... . ..+.+.+.|.+
T Consensus 286 ~l~~~~~~~~~~~~~~~~n~~~~~a 310 (421)
T 3l8a_A 286 SLRRKFQYRQLANNQHEVPTVGMIA 310 (421)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHH
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHH
Confidence 47777766542 2 33566666654
No 60
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.5e-35 Score=263.58 Aligned_cols=234 Identities=18% Similarity=0.248 Sum_probs=197.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
.+++|+|+.|++. +++++.+.+++.+.+. ....|++..+ .++|+++++++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~ 95 (365)
T 3get_A 29 VKEVIKLASNENP----FGTPPKAIECLRQNAN--KAHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI 95 (365)
T ss_dssp CSCCEECSSCCCT----TCSCHHHHHHHHHHGG--GTTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 4789999999853 6788999999998886 3457887666 99999999998 46788999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHH
Q 022213 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 200 (301)
+.++++++++||+|+++.|+|..+...++..|.+++.+++ ..+++ +|++++++.++++++++++++|+||||.+++.+
T Consensus 96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 173 (365)
T 3get_A 96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS 173 (365)
T ss_dssp HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence 9999999999999999999999999999999999999987 34567 999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEccCCccccc--CCCCCC-CccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchh
Q 022213 201 HLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~D~~y~~~~~--~~~~~~-~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~ 277 (301)
++++|+++| ++|+++|+|++|..+.| .+..+. .+...+..+++++++|+||.++++|+|+||++++ ++
T Consensus 174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~ 244 (365)
T 3get_A 174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN--------AN 244 (365)
T ss_dssp HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC--------HH
T ss_pred HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC--------HH
Confidence 999999988 57999999999998885 433322 2333334467899999999999999999999983 35
Q ss_pred HHHHHHhhhcccCCCccccccc
Q 022213 278 IIDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~q~~ 299 (301)
++++++..... .+++.+.|.+
T Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~ 265 (365)
T 3get_A 245 IISAFYKLRAP-FNVSNLALKA 265 (365)
T ss_dssp HHHHHHHHSCT-TCSCHHHHHH
T ss_pred HHHHHHHhcCC-CCcCHHHHHH
Confidence 88888776553 3467777654
No 61
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=7.4e-35 Score=268.46 Aligned_cols=246 Identities=20% Similarity=0.332 Sum_probs=199.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC-----------CCCCCCCCCCHHHHHHHHHHHhhhCC--CCCCC
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-----------FNCYATNSGIPPARRAIADYLSRDLP--YKLSA 107 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~-----------~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 107 (301)
+..+|+|+.+.. ....+.+.+++.+...... +..|++..|..+||+++++++.+.++ +.+++
T Consensus 37 p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~ 111 (435)
T 3piu_A 37 TNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP 111 (435)
T ss_dssp TTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG
T ss_pred CCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH
Confidence 456899998753 1235666777665433111 13699988999999999999986443 45778
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hcCceEEEeecCCCCCCCCCHHHHHhhccc------C
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALADK------N 180 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 180 (301)
++|++|+|+++++..++++++++||.|+++.|+|.++...+. ..|.+++.++++.+++|.+|++.|++.+++ +
T Consensus 112 ~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 191 (435)
T 3piu_A 112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR 191 (435)
T ss_dssp GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred HHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999988777 789999999987766788999999998865 7
Q ss_pred ccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC----------CCCEEEEecC
Q 022213 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS----------IVPVITLGSI 250 (301)
Q Consensus 181 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~----------~~~vi~~~s~ 250 (301)
+++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.|++..+.++..+.. .+++++++|+
T Consensus 192 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~ 271 (435)
T 3piu_A 192 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL 271 (435)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence 788999999999999999999999999999999999999999999888766655544332 4578999999
Q ss_pred cccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcccCCCccccccc
Q 022213 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 251 SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 299 (301)
||.|+++|+|+||++++++ +++..++..... .+.+++.|.+
T Consensus 272 sK~~g~~G~r~G~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~ 312 (435)
T 3piu_A 272 SKDLGLPGFRVGAIYSNDD-------MVVAAATKMSSF-GLVSSQTQHL 312 (435)
T ss_dssp SSSSCCGGGCEEEEEESCH-------HHHHHHHHHGGG-SCCCHHHHHH
T ss_pred ecccCCCceeEEEEEeCCH-------HHHHHHHHHhhc-CCCCHHHHHH
Confidence 9999999999999998542 466666665443 3456666654
No 62
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=6.5e-34 Score=256.15 Aligned_cols=232 Identities=20% Similarity=0.347 Sum_probs=196.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCCEEEcCCHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKL-SADDVYVTLGCKQA 119 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~g~~~a 119 (301)
.+++|+|+.|++ .+++++.+.+++.+.+.......|++ .+..++|+++++++ ++ ++++|++|+|++++
T Consensus 29 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a 97 (367)
T 3euc_A 29 SHGLVKLDAMEN----PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDEI 97 (367)
T ss_dssp CTTCEECCSSCC----CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHHH
T ss_pred CCCeeEccCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHHH
Confidence 568999999984 36788899999998887434557877 48899999999998 34 67899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCC
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~ 198 (301)
++.++++++++||+|+++.|+|.++...++..|.+++.++++. ++.+|++.+++.+++ +++++++++|+||||.+++
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 175 (367)
T 3euc_A 98 ISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD 175 (367)
T ss_dssp HHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999864 567999999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHHhC--CCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccch
Q 022213 199 YHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (301)
Q Consensus 199 ~~~l~~i~~~~~~~--~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~ 276 (301)
.+++++|+++|++| |+++|+|++|..+.+.+ . ...++..++++++.|+||. +++|+|+||++++ +
T Consensus 176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~--------~ 242 (367)
T 3euc_A 176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD--------P 242 (367)
T ss_dssp HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC--------H
T ss_pred HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEEecchhh-cccccCceeeeeC--------H
Confidence 99999999999999 99999999999876432 1 2233445678999999999 9999999999983 2
Q ss_pred hHHHHHHhhhcccCCCccccccc
Q 022213 277 GIIDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~q~~ 299 (301)
+++++++.... ..+.+.+.|.+
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~a 264 (367)
T 3euc_A 243 QWLEQLDKVRP-PYNVNVLTEAT 264 (367)
T ss_dssp HHHHHHGGGCC-SSCCCHHHHHH
T ss_pred HHHHHHHHhCC-CCCCCHHHHHH
Confidence 57788777654 23466666654
No 63
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=2.2e-34 Score=272.26 Aligned_cols=235 Identities=16% Similarity=0.269 Sum_probs=185.4
Q ss_pred ccHHHHHHHHHhhcccCCCC----CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH-
Q 022213 23 VTVKTSLASIIDSVNKNDPR----PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL- 97 (301)
Q Consensus 23 ~~i~~~~~~~~~~~~~~~~~----~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l- 97 (301)
+.++..+..+.+.....++. .+|+|+.|.|. ++ ++.+.+++.+.+.. ..|+++.|..++|+++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~----~~-~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~ 152 (546)
T 2zy4_A 81 DGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLG----LD-PAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYI 152 (546)
T ss_dssp TTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSC----CC-HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHhcCCCCcchhHHhhhecccCCCC----CC-ChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHH
Confidence 46666555555433211111 28999999864 43 45566666666642 47999889999999987755
Q ss_pred hhhCCCCC---CCCCEEEcCCHHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHh--cCceEEEeecCCCCCCC
Q 022213 98 SRDLPYKL---SADDVYVTLGCKQAVEVILSV-----LARPGANVLLPRPGWPYYEGIAQR--KQVEVRHFDLLPERNWE 167 (301)
Q Consensus 98 ~~~~~~~~---~~~~i~~t~g~~~al~~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~ 167 (301)
.++++... ++++|++|+|+++++..++++ ++++||+|++++|+|.+|...+.. .|.+++.++++++++|.
T Consensus 153 ~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 232 (546)
T 2zy4_A 153 IREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQ 232 (546)
T ss_dssp HHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTB
T ss_pred HHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCC
Confidence 44443322 468999999999999999988 478999999999999999877554 46888999887777788
Q ss_pred CCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHH--HhCCCeEEEccCCcccccCCCCCCCccccCCCCCEE
Q 022213 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA--RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (301)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~--~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi 245 (301)
+|++.+++.++.+++++++++||||||.+++.+++++|+++| +++|++||+||+|.++.++ +.++.... .+++|
T Consensus 233 ~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i 308 (546)
T 2zy4_A 233 YPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTL 308 (546)
T ss_dssp CCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEE
T ss_pred CCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEE
Confidence 999999998877889999999999999999999999999999 8899999999999998753 23333332 25799
Q ss_pred EEecCcccCCCCcceeEEEEeeCC
Q 022213 246 TLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 246 ~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
+++||||.++++|+|+||+++++.
T Consensus 309 ~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 309 LVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp EEEESTTTTTCGGGCEEEEEEESS
T ss_pred EEEeCccccCCCCcceEEEEECCH
Confidence 999999999999999999998764
No 64
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.9e-35 Score=269.69 Aligned_cols=241 Identities=19% Similarity=0.143 Sum_probs=191.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHH--HHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAI--VDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~--~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
...+|+|+.|.|+.. .++.++.+.+++ .+++... ...+|++..|..+||+++++++ ++++++|++|+|+
T Consensus 32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 104 (427)
T 3ppl_A 32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS 104 (427)
T ss_dssp TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence 457899999997621 122222355554 4444332 2568999889999999999999 5688999999999
Q ss_pred HHHH--HHHHHHhcC--C----------CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc-cCc
Q 022213 117 KQAV--EVILSVLAR--P----------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNT 181 (301)
Q Consensus 117 ~~al--~~~~~~l~~--~----------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ 181 (301)
++++ +.+++++++ + ||+|++++|+|..+...++..|.+++.++++.+ ++|++.|+++++ .++
T Consensus 105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~ 181 (427)
T 3ppl_A 105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV 181 (427)
T ss_dssp HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence 9999 588888887 6 999999999999999999999999999998643 389999999985 467
Q ss_pred cEEEEc-CCCCCcccCCCHHHHHHHHHHH-HhCCCeEEEccCCcccccCCCCCC--Ccccc----CCCCCEEEEecCccc
Q 022213 182 AAMVII-NPGNPCGNVFTYHHLQEIAEMA-RKLRVMVVADEVYGHLTFGSIPYT--PMGLF----GSIVPVITLGSISKR 253 (301)
Q Consensus 182 ~~v~l~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~ii~D~~y~~~~~~~~~~~--~~~~~----~~~~~vi~~~s~SK~ 253 (301)
++++++ +||||||.+++.+++++|+++| ++||+++|+||+|..+.|++.... ++..+ +..+++|+++||||.
T Consensus 182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 261 (427)
T 3ppl_A 182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI 261 (427)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence 777654 7899999999999999999999 999999999999999888654322 33322 245689999999999
Q ss_pred CCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCcccccccC
Q 022213 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVCE 300 (301)
Q Consensus 254 ~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~ 300 (301)
+++|+|+||++++. +++.+++.... ...+++++.|.++
T Consensus 262 -~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~ 300 (427)
T 3ppl_A 262 -TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAH 300 (427)
T ss_dssp -SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred -cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHH
Confidence 89999999999743 47777777654 3556788888653
No 65
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=1.5e-33 Score=253.71 Aligned_cols=233 Identities=17% Similarity=0.312 Sum_probs=189.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
+++++|+|+.|++. +++++.+.+++.+++.. ...|++ .|..++|+++++++ ++++++|++|+|++++
T Consensus 22 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a 88 (364)
T 1lc5_A 22 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES 88 (364)
T ss_dssp CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred CccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHH
Confidence 35679999999853 55778899999887753 347866 48999999999999 4577899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCH
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 199 (301)
+..+++++ +||+|+++.|+|.++...++..|.+++.++++.++++.+ ++.+.+.++++++++++++|+||||.+++.
T Consensus 89 l~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~ 165 (364)
T 1lc5_A 89 IFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPER 165 (364)
T ss_dssp HHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCH
Confidence 99999999 789999999999999999999999999999865344444 565666666678889999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEE-eeCCCCcccchhH
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGI 278 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~-~~~~~~~~~~~~~ 278 (301)
+++++|+++|++||+++|+||+|..+.+++... +..++..++++++.|+||.++++|+|+||++ ++ +++
T Consensus 166 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 235 (364)
T 1lc5_A 166 PLLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--------DAA 235 (364)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--------HHH
T ss_pred HHHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECC--------HHH
Confidence 999999999999999999999999988753222 2223444678999999999999999999998 53 357
Q ss_pred HHHHHhhhcccCCCccccccc
Q 022213 279 IDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~q~~ 299 (301)
+++++.... ..+.+.++|.+
T Consensus 236 ~~~l~~~~~-~~~~~~~~~~~ 255 (364)
T 1lc5_A 236 MARMRRQQM-PWSVNALAALA 255 (364)
T ss_dssp HHHHHHHSC-TTCSCHHHHHH
T ss_pred HHHHHHhCC-CCCCCHHHHHH
Confidence 777776654 33566677654
No 66
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=6.4e-37 Score=278.51 Aligned_cols=244 Identities=18% Similarity=0.302 Sum_probs=204.2
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (301)
++|+|+.|+| .+++++.+.+++.+++... ...|++. ..++|+++++++.+.++..+++++|++|+|+++++..
T Consensus 32 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (392)
T 3b1d_A 32 QLLPAWIADM----DFEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI 104 (392)
Confidence 8999999996 3677888999998887543 3467764 7899999999998877777888999999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCC-CCCCCHHHHHhhcc-cCccEEEEcCCCCCcccCCCHH
Q 022213 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYH 200 (301)
Q Consensus 123 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~ 200 (301)
++++++++||+|+++.|+|.++...++..|.+++.+++..++ +|.+|++.+++.++ .+++++++++|+||||.+++.+
T Consensus 105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~ 184 (392)
T 3b1d_A 105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE 184 (392)
Confidence 999999999999999999999998888899999888875332 46789999999887 5788888999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC--CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhH
Q 022213 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~--~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~ 278 (301)
++++|+++|++||+++|+||+|..+.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++ ++
T Consensus 185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~~ 257 (392)
T 3b1d_A 185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------TL 257 (392)
Confidence 9999999999999999999999999987655556655544 46789999999999999999999998653 26
Q ss_pred HHHHHhhhccc--CCCcccccccC
Q 022213 279 IDSIKDCLSIY--SDIPTFIQVCE 300 (301)
Q Consensus 279 ~~~~~~~~~~~--~~~~~~~q~~~ 300 (301)
++.++...... .+++.+.|.++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~a~ 281 (392)
T 3b1d_A 258 CAQFKHQQLVNNHHEVSSLGYIAT 281 (392)
Confidence 66666654322 24577777654
No 67
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=9.9e-34 Score=254.46 Aligned_cols=222 Identities=21% Similarity=0.375 Sum_probs=183.3
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHH
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (301)
+++|+|+.|.+. +++|+.+ ++ .....|++. +..++|+++|+++ ++++++|++|+|++++++
T Consensus 29 ~~~i~l~~~~~~----~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~ 89 (356)
T 1fg7_A 29 NGDVWLNANEYP----TAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE 89 (356)
T ss_dssp TCSEECSSCCCS----SCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred CceEEeeCCCCC----CCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence 468999999853 4444444 12 235579885 5899999999999 467889999999999999
Q ss_pred HHHHHhcCCC-CEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHH
Q 022213 122 VILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (301)
Q Consensus 122 ~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 200 (301)
.++++++++| |+|+++.|+|.++...++..|.+++.+++. .++.+|++++++.++ +++++++++||||||.+++.+
T Consensus 90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~ 166 (356)
T 1fg7_A 90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ 166 (356)
T ss_dssp HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999 999999999999999999999999988875 356799999999887 789999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcccc-CCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHH
Q 022213 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~-~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~ 279 (301)
++++|+++|+ +|+++|+||+|..+... .++..+ +..+++++++|+||.|+++|+|+||++++ ++++
T Consensus 167 ~l~~l~~~~~-~~~~li~De~~~~~~~~----~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~ 233 (356)
T 1fg7_A 167 DFRTLLELTR-GKAIVVADEAYIEFCPQ----ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI 233 (356)
T ss_dssp HHHHHHHHHT-TTCEEEEECTTGGGSGG----GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred HHHHHHHhCC-CCCEEEEEccchhhcCC----CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC--------HHHH
Confidence 9999999999 99999999999987621 122222 33467899999999999999999999983 2577
Q ss_pred HHHHhhhcccCCCccccccc
Q 022213 280 DSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 280 ~~~~~~~~~~~~~~~~~q~~ 299 (301)
++++...... +++.++|.+
T Consensus 234 ~~l~~~~~~~-~~~~~~~~a 252 (356)
T 1fg7_A 234 NLLMKVIAPY-PLSTPVADI 252 (356)
T ss_dssp HHHHHHSCSS-CSCHHHHHH
T ss_pred HHHHHhcCCC-CCCHHHHHH
Confidence 8887765433 567777754
No 68
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-33 Score=252.63 Aligned_cols=231 Identities=19% Similarity=0.321 Sum_probs=192.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
+++++|+|+.|.+. +++++.+.+++.+++.. ...|+. .+..++|+++++++ ++++++|++|+|++++
T Consensus 24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a 90 (361)
T 3ftb_A 24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEI 90 (361)
T ss_dssp ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence 47889999999753 66788999999988874 346755 68899999999999 4678899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCH
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 199 (301)
++.+++++ |+|+++.|+|.++...++..|.+++.++++.+.+ ++++.+++.+++ ++++++++|+||||.+++.
T Consensus 91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~ 163 (361)
T 3ftb_A 91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMC--IDYEDIISKIDD-VDSVIIGNPNNPNGGLINK 163 (361)
T ss_dssp HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSC--CCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccC--CCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence 99999988 9999999999999999999999999999865444 677999999987 9999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHH
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~ 279 (301)
+++++|+++|++||+++|+|++|..+.++ ............+++++++|+||.++++|+|+||++..+ ++++
T Consensus 164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~ 235 (361)
T 3ftb_A 164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA 235 (361)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence 99999999999999999999999998886 333344444455678999999999999999999998433 3588
Q ss_pred HHHHhhhcccCCCccccccc
Q 022213 280 DSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 280 ~~~~~~~~~~~~~~~~~q~~ 299 (301)
++++..... .+.+.+.|.+
T Consensus 236 ~~~~~~~~~-~~~~~~~~~~ 254 (361)
T 3ftb_A 236 AKIKAKQNP-WNINCFAEMA 254 (361)
T ss_dssp HHHHTTSCT-TCSCHHHHHH
T ss_pred HHHHhhCCC-CCCCHHHHHH
Confidence 888776552 3566666654
No 69
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.4e-34 Score=265.65 Aligned_cols=239 Identities=20% Similarity=0.172 Sum_probs=189.4
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHH--hcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAV--RSG-KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~--~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
.+|+|+.|+|... .+++++.+.+++.+.+ ... ...+|++..|..+||+++++|+ ++++++|++|+|++++
T Consensus 33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a 105 (422)
T 3d6k_A 33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN 105 (422)
T ss_dssp CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence 5899999997310 1455556767665442 122 3558999999999999999999 4688999999999999
Q ss_pred H--HHHHHHhcCC------------CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEE
Q 022213 120 V--EVILSVLARP------------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAM 184 (301)
Q Consensus 120 l--~~~~~~l~~~------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 184 (301)
+ .++++++.++ +|+|++++|+|.++...++..|.+++.++++.+ ++|++.+++.+++ +++++
T Consensus 106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v 182 (422)
T 3d6k_A 106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM 182 (422)
T ss_dssp HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence 7 6777888766 358999999999999999999999999998642 3899999998875 67877
Q ss_pred E-EcCCCCCcccCCCHHHHHHHHHHHH-hCCCeEEEccCCcc--cccCCCCCCCccc----cCCCCCEEEEecCcccCCC
Q 022213 185 V-IINPGNPCGNVFTYHHLQEIAEMAR-KLRVMVVADEVYGH--LTFGSIPYTPMGL----FGSIVPVITLGSISKRWLV 256 (301)
Q Consensus 185 ~-l~~p~nptG~~~~~~~l~~i~~~~~-~~~~~ii~D~~y~~--~~~~~~~~~~~~~----~~~~~~vi~~~s~SK~~~~ 256 (301)
+ +++||||||.+++.+++++|+++|+ +||+++|+||+|.. +.+++....++.. .+..+++|+++||||. ++
T Consensus 183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~ 261 (422)
T 3d6k_A 183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH 261 (422)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence 7 6899999999999999999999999 99999999999986 4433333334422 2345679999999999 89
Q ss_pred CcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCcccccccC
Q 022213 257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVCE 300 (301)
Q Consensus 257 ~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~ 300 (301)
||+|+||++++. +++++++.... ...+++.++|.++
T Consensus 262 ~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~ 298 (422)
T 3d6k_A 262 AGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAH 298 (422)
T ss_dssp TTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred cccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 999999999842 57787777654 3456788888653
No 70
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=5.5e-34 Score=263.17 Aligned_cols=267 Identities=20% Similarity=0.303 Sum_probs=203.7
Q ss_pred hhcCCcccHHHHHHHHHhhcccCCCCCee-eccCCCCCCCCCCCChHHHHHHHHHHHhc-------CC----CCCCCCCC
Q 022213 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVV-PLGYGDPTAFPCFRTAVEAEDAIVDAVRS-------GK----FNCYATNS 84 (301)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i-~l~~g~p~~~p~~~~~~~~~~~~~~~~~~-------~~----~~~Y~~~~ 84 (301)
.+..+++.++.++..+.+... .+++| +|+.|.|... .+..+.+.+++.+.+.+ .. ...|++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 83 (444)
T 3if2_A 9 QKFTQPTGISQLMDDLGDALK---SDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQ 83 (444)
T ss_dssp HHHHSCCHHHHHHHHHHHHHH---SSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTT
T ss_pred hhccCchhHHHHHHHHHhhhc---CchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhhhhhccCCCC
Confidence 345566788887776655432 37899 9999997531 01114556666666654 21 24699889
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCC--------------EEEEc-CCCCcchHHH--
Q 022213 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA--------------NVLLP-RPGWPYYEGI-- 147 (301)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd--------------~Vl~~-~p~~~~~~~~-- 147 (301)
|..+||+++|+|+.+.+++.+++++|++|+|+++++++++++++++|| +|+++ .|+|..+...
T Consensus 84 g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~ 163 (444)
T 3if2_A 84 GDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHV 163 (444)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCS
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccc
Confidence 999999999999998888889999999999999999999999999988 78876 9999988653
Q ss_pred ----HHhcCceEEEeecCCCC---CCCCCHHHHHhh---cccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 148 ----AQRKQVEVRHFDLLPER---NWEVDLDAVEAL---ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 148 ----~~~~g~~~~~~~~~~~~---~~~~~~~~l~~~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
+...|..++.++++.++ ++.+|++.|+++ +.++++++++++|+||||.+++.+++++|+++|++||+++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li 243 (444)
T 3if2_A 164 EGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLI 243 (444)
T ss_dssp SSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred ccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEE
Confidence 34567778777765422 357899999998 66788999999999999999999999999999999999999
Q ss_pred EccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCcccc
Q 022213 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFI 296 (301)
Q Consensus 218 ~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 296 (301)
+|++|+.+... ..+.... ....++++++.|+||. +++|+|+||++++. +++.+++.... ...+++++.
T Consensus 244 ~De~~~~~~~~-~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~ 312 (444)
T 3if2_A 244 IDNAYGMPFPN-IIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNAVVNLAPTRFG 312 (444)
T ss_dssp EECTTCTTTTC-CBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCCHH
T ss_pred EECCCCCcccc-ccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHHhccCCCChHH
Confidence 99999863211 1111111 1223578999999997 99999999998732 57777776654 344567777
Q ss_pred ccc
Q 022213 297 QVC 299 (301)
Q Consensus 297 q~~ 299 (301)
|.+
T Consensus 313 ~~a 315 (444)
T 3if2_A 313 AAI 315 (444)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 71
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=3.4e-34 Score=262.16 Aligned_cols=260 Identities=22% Similarity=0.292 Sum_probs=186.7
Q ss_pred CcccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC----CCCCCCCCCCHHHHHHHHHH
Q 022213 21 PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK----FNCYATNSGIPPARRAIADY 96 (301)
Q Consensus 21 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~ 96 (301)
.++.+...+....+.. .++++|+|+.|.|... .++.+.+.+++.+.+.+.. ...|++..|..+||++++++
T Consensus 13 ~~~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~ 87 (417)
T 3g7q_A 13 RHSGITRLMEDLNDGL---RTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVL 87 (417)
T ss_dssp ---CHHHHHHHHHC--------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhhc---cCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHH
Confidence 5667777766554422 3578999999997631 1112566777777665431 23799989999999999999
Q ss_pred HhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCC-----EEEEc-CCCCcchHHHHHhc------CceEEEeecCCCC
Q 022213 97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA-----NVLLP-RPGWPYYEGIAQRK------QVEVRHFDLLPER 164 (301)
Q Consensus 97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd-----~Vl~~-~p~~~~~~~~~~~~------g~~~~~~~~~~~~ 164 (301)
+.+.++..+++++|++|+|++++++.++++++++|| +|+++ +|+|.++...+... +..+..++.. ..
T Consensus 88 ~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 166 (417)
T 3g7q_A 88 LRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEG-QF 166 (417)
T ss_dssp HHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGG-EE
T ss_pred HHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCc-cc
Confidence 998888889999999999999999999999999987 89997 99999887654322 2333333321 11
Q ss_pred CCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCE
Q 022213 165 NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244 (301)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~v 244 (301)
++.+|++.++ ++++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+... ....... ....+++
T Consensus 167 ~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~-~~~~~~~-~~~~~~~ 242 (417)
T 3g7q_A 167 KYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG-IIFSEAR-PLWNPNI 242 (417)
T ss_dssp EEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC-CBCSCCC-CCCCTTE
T ss_pred ccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc-ccccccc-cCCCCCE
Confidence 4568888887 6677899999999999999999999999999999999999999999863211 1111111 1123578
Q ss_pred EEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 245 i~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
|++.|||| ++++|+|+||++++ ++++++++.... ...+++++.|.+
T Consensus 243 i~~~s~sK-~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (417)
T 3g7q_A 243 ILCMSLSK-LGLPGSRCGIIIAN--------DKTITAIANMNGIISLAPGGMGPAM 289 (417)
T ss_dssp EEEEESGG-GTCTTSCCEEEECC--------HHHHHHHHHHHHHHCCCCCSHHHHH
T ss_pred EEEEechh-ccCCCcceEEEEeC--------HHHHHHHHHhhcceeeCCCcHHHHH
Confidence 99999999 59999999999873 357788777654 344567777764
No 72
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=3.7e-34 Score=262.68 Aligned_cols=240 Identities=20% Similarity=0.255 Sum_probs=193.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHH--HHHhcC-CCCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIV--DAVRSG-KFNCY-ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~--~~~~~~-~~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
...+|+|+.|.|+.. .++.++.+.+++. +.+... ....| ++..|..+||+++++++ ++++++|++|+|+
T Consensus 24 ~~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 96 (423)
T 3ez1_A 24 RGLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNS 96 (423)
T ss_dssp HTCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCc
Confidence 357899999997521 1456666777764 444322 24689 88889999999999998 5688899999999
Q ss_pred HHHHH--HHHHHhcC--C---------CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc--ccCc
Q 022213 117 KQAVE--VILSVLAR--P---------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA--DKNT 181 (301)
Q Consensus 117 ~~al~--~~~~~l~~--~---------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 181 (301)
++++. .+++++++ + ||+|++++|+|.++...++..|.+++.++++.+ ++|++.|++++ ..++
T Consensus 97 ~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~ 173 (423)
T 3ez1_A 97 SLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV 173 (423)
T ss_dssp HHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence 99998 89999887 8 599999999999999999999999999998643 49999999998 4577
Q ss_pred cEEEE-cCCCCCcccCCCHHHHHHHHHHH-HhCCCeEEEccCCcccccCC---CCCCCcccc----CCCCCEEEEecCcc
Q 022213 182 AAMVI-INPGNPCGNVFTYHHLQEIAEMA-RKLRVMVVADEVYGHLTFGS---IPYTPMGLF----GSIVPVITLGSISK 252 (301)
Q Consensus 182 ~~v~l-~~p~nptG~~~~~~~l~~i~~~~-~~~~~~ii~D~~y~~~~~~~---~~~~~~~~~----~~~~~vi~~~s~SK 252 (301)
+++++ ++||||||.+++.+++++|+++| ++||+++|+||+|..+.|.+ ..+.++..+ +..+++|+++||||
T Consensus 174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 253 (423)
T 3ez1_A 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK 253 (423)
T ss_dssp EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence 87764 58999999999999999999999 99999999999999766654 222233322 34568999999999
Q ss_pred cCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 253 ~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
. +++|+|+||++++. +++.+++.... ...+++++.|.+
T Consensus 254 ~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a 292 (423)
T 3ez1_A 254 I-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQAR 292 (423)
T ss_dssp T-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHH
T ss_pred h-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHH
Confidence 9 78999999999843 47788877654 345678888765
No 73
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=2.1e-32 Score=246.74 Aligned_cols=234 Identities=17% Similarity=0.307 Sum_probs=191.0
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHH
Q 022213 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (301)
Q Consensus 44 ~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (301)
.|+|+.|++. ++.++.+.+++.++++.. ....|++..+ .++|+++++++.+.+|.++++++|++|+|++++++
T Consensus 32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~ 106 (369)
T 3cq5_A 32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106 (369)
T ss_dssp SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence 4999999862 667889999998887642 2457877655 89999999999887777788899999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHH
Q 022213 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYH 200 (301)
Q Consensus 122 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~ 200 (301)
.++++++++||+|+++.|+|.++...++..|.+++.++.+ .++.+|++.+++.+++ +++++++++|+||||.+++.+
T Consensus 107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999864 4567999999998877 889999999999999999976
Q ss_pred HHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCC-CEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHH
Q 022213 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV-PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~-~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~ 279 (301)
++++|++ .+++++|+||+|..+.++ ...+...+..+ +++++.|+||.++++|+|+||+++++ +++
T Consensus 185 ~l~~l~~---~~~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 250 (369)
T 3cq5_A 185 DVERIIN---VAPGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI 250 (369)
T ss_dssp HHHHHHH---HCSSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred HHHHHHH---hCCCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence 6666666 556999999999987753 11222223345 78999999999999999999999853 477
Q ss_pred HHHHhhhcccCCCccccccc
Q 022213 280 DSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 280 ~~~~~~~~~~~~~~~~~q~~ 299 (301)
++++..... .+++.+.|.+
T Consensus 251 ~~l~~~~~~-~~~~~~~~~a 269 (369)
T 3cq5_A 251 DAVMLVRLP-YHLSALSQAA 269 (369)
T ss_dssp HHHHTTSCT-TCSCHHHHHH
T ss_pred HHHHHcCCC-CCCCHHHHHH
Confidence 777765542 2466666654
No 74
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=3.7e-33 Score=263.48 Aligned_cols=215 Identities=21% Similarity=0.363 Sum_probs=180.3
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhh-CC-CCCC-CCCEEEcCCHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRD-LP-YKLS-ADDVYVTLGCKQ 118 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~-~~-~~~~-~~~i~~t~g~~~ 118 (301)
.+|+|+.|.|. ++ ++.+.+++.+.+... .|. +..|..++|+++++++... .+ .... +++|++|+|+++
T Consensus 104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~ 175 (533)
T 3f6t_A 104 DAVNYCHTELG----LN-RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA 175 (533)
T ss_dssp HHHHHHHHTTC----CC-HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred hheeccCCCCC----cC-CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence 47999999975 44 455555555565532 455 6789999999999999665 34 4444 479999999999
Q ss_pred HHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCC--CCCCCCCHHHHHhhcccCccEEEEcCCCC
Q 022213 119 AVEVILSV-----LARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP--ERNWEVDLDAVEALADKNTAAMVIINPGN 191 (301)
Q Consensus 119 al~~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~l~~p~n 191 (301)
++..++.+ ++++||+|+++.|+|.++...++..|.+++.+++.. ++++.+|++.+++.++++++++++++|+|
T Consensus 176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~N 255 (533)
T 3f6t_A 176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTN 255 (533)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCT
T ss_pred HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCC
Confidence 99999998 789999999999999999998899999999998865 56788999999999988899999999999
Q ss_pred CcccCCCHHHHHHHHHHHH-hCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 192 PCGNVFTYHHLQEIAEMAR-KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~-~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
|||.+++.+++++|+++|+ +|++++|+||+|..+.++. .++.... .+++|+++||||.++++|+|+||+++++.
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF---KSIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEK 330 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC---CCHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc---cCHhhcC-CCCEEEEecCcccCCCcccceEEEEECcH
Confidence 9999999999999999999 6899999999999988742 2333322 25789999999999999999999999765
No 75
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=7.9e-33 Score=249.78 Aligned_cols=215 Identities=23% Similarity=0.371 Sum_probs=181.5
Q ss_pred HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH
Q 022213 67 AIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG 146 (301)
Q Consensus 67 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~ 146 (301)
++.+.+.... ..|++..|..+||+++++++. .+++++|++|+|+++|+..++++++++||+|+++.|+|.++..
T Consensus 47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 4445555443 479988899999999999873 3678899999999999999999999999999999999999999
Q ss_pred HHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 147 IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 147 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
.++..|.+++.++++.++++.+|++.++++++++++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~ 200 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS 200 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999999998766778899999999998899999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhcc-cCCCccccccc
Q 022213 227 FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQVC 299 (301)
Q Consensus 227 ~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~ 299 (301)
++ ....+.. ..++++++.||||.++++|+|+||++++ ++++++++..... ..+++.+.|.+
T Consensus 201 ~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~ 262 (375)
T 3op7_A 201 EL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAAN--------HQVTDILRDYRDYTMICAGVFDDLV 262 (375)
T ss_dssp SS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECC--------HHHHHHHTTTGGGTTSCCCHHHHHH
T ss_pred cc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeC--------HHHHHHHHHHHhhhccCCCcHHHHH
Confidence 75 2222222 2356799999999999999999999972 3588888776543 33456666543
No 76
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.1e-32 Score=244.87 Aligned_cols=222 Identities=17% Similarity=0.207 Sum_probs=181.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
+++++|+|+.|.| .+++++.+.+++.+.+. ....|++..+ .++|+++++++ ++++++|++|+|++++
T Consensus 13 ~g~~~id~~~~~~----~~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~a 79 (350)
T 3fkd_A 13 LSSEIVNFSTTVW----TDGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAA 79 (350)
T ss_dssp ---CCEECSCCSC----CCSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHH
T ss_pred ccccEEEccCCCC----CCCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 4689999999985 36678899999988773 3447888666 89999999998 4678899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeec-CCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCC
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL-LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 198 (301)
+..+++++. ||+|+++.|+|.++...++..|.+++.+++ +...+ +++ ++++++++++|+||||.+++
T Consensus 80 l~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~ 147 (350)
T 3fkd_A 80 FYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQ 147 (350)
T ss_dssp HHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCC
Confidence 999999998 999999999999999999999999999998 44333 332 46899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhH
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~ 278 (301)
.+++++|++.|+++ ++|+|++|..+.+++... ...++..+++++++||||.++++|+|+||++++ +++
T Consensus 148 ~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~--------~~~ 215 (350)
T 3fkd_A 148 RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN--------KDF 215 (350)
T ss_dssp HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC--------HHH
T ss_pred HHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeC--------HHH
Confidence 99999999988765 999999999988765322 234445568899999999999999999999982 358
Q ss_pred HHHHHhhhcccCCCccccccc
Q 022213 279 IDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~q~~ 299 (301)
+++++.... ..+++.+.|.+
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~ 235 (350)
T 3fkd_A 216 MKRVAAFST-PWAVNALAIEA 235 (350)
T ss_dssp HHHHHTTCC-TTCSCHHHHHH
T ss_pred HHHHHHhCC-CCCCCHHHHHH
Confidence 888887655 33566676654
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.6e-31 Score=237.55 Aligned_cols=223 Identities=17% Similarity=0.251 Sum_probs=179.7
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
..+++|+|+.+.+ .+++++.+.+++.+.+.. ...|+. .|..+||+++++++ ++++++|++|+|++++
T Consensus 14 ~~~~~i~l~~n~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~ 80 (337)
T 3p1t_A 14 AAAQAVCLAFNEN----PEAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC 80 (337)
T ss_dssp CCCCCEECSSCCC----CSCCCHHHHHHHHHHGGG--TTSCCT-THHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred CCCCceEeeCCCC----CCCCCHHHHHHHHHhhhh--hccCCC-CchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence 4678999999964 267788999999888763 457854 68899999999998 4678899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCH
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 199 (301)
+..+++++ +||+|+++.|+|.++...++..|.+++.++++. ++.+|++.+++. .+++++++++|+||||.+++.
T Consensus 81 l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~ 154 (337)
T 3p1t_A 81 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSA 154 (337)
T ss_dssp HHHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCH
Confidence 99999998 999999999999999999999999999998753 567999999886 367899999999999999996
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHH
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~ 279 (301)
+++.+| |+++++ +|+||+|..+.+.+.. . ....+++++++|+||.++++|+|+||++++. +++
T Consensus 155 ~~l~~l---~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~ 217 (337)
T 3p1t_A 155 GELDQL---RQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------ELI 217 (337)
T ss_dssp HHHHHH---HHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HHH
T ss_pred HHHHHH---HHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HHH
Confidence 665555 557776 5669999987654321 1 1223568999999999999999999999743 577
Q ss_pred HHHHhhhcccCCCccccccc
Q 022213 280 DSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 280 ~~~~~~~~~~~~~~~~~q~~ 299 (301)
.+++.... ..+++.+.|.+
T Consensus 218 ~~l~~~~~-~~~~~~~~~~a 236 (337)
T 3p1t_A 218 AAMKRKQW-FCNVGTLDLHA 236 (337)
T ss_dssp HHHHTTSC-TTCSCHHHHHH
T ss_pred HHHHhhcC-CCCCCHHHHHH
Confidence 77776543 33566666654
No 78
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.98 E-value=1.3e-31 Score=240.70 Aligned_cols=227 Identities=18% Similarity=0.323 Sum_probs=180.9
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
++.++|+|+.|+| .+++++.+.+++.+++... ....|++. +..++|+++++++ ++++++|++|+|++
T Consensus 24 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~ 92 (360)
T 3hdo_A 24 DIASWIKLNTNEN----PYPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSD 92 (360)
T ss_dssp CCTTSEECSSCCC----SSCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred cccceeeccCCCC----CCCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence 4568999999986 3778899999999988753 14467764 6799999999999 36788999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCC
Q 022213 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (301)
Q Consensus 118 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~ 197 (301)
++++.++++++++||+|+++.|+|.++...++..|.+++.++++. ++.+ +++++.+ +++++++++|+||||.++
T Consensus 93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~ 166 (360)
T 3hdo_A 93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF 166 (360)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence 999999999999999999999999999999999999999998843 3334 4444333 467899999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchh
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~ 277 (301)
+.++ +.++|+++|+++|+|++|..+.. ..... ..+..+++++++|+||.++++|+|+||++++ ++
T Consensus 167 ~~~~---l~~l~~~~~~~li~De~~~~~~~--~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~ 231 (360)
T 3hdo_A 167 PLEY---IDELARRCAGMLVLDETYAEFAE--SNALE--LVRRHENVVVTRTLSKSYSLAGMRIGLAIAR--------PE 231 (360)
T ss_dssp CHHH---HHHHHHHBSSEEEEECTTGGGSS--CCCTH--HHHHCSSEEEEEESTTTTSCTTSCCEEEECC--------HH
T ss_pred CHHH---HHHHHHHCCCEEEEECChHhhCC--cchhH--HhccCCCEEEEecchHhhcCCccceeeEeeC--------HH
Confidence 9555 55566789999999999998642 22222 2233467899999999999999999999973 35
Q ss_pred HHHHHHhhhcccCCCccccccc
Q 022213 278 IIDSIKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~q~~ 299 (301)
++++++..... .+.+.+.|.+
T Consensus 232 ~~~~~~~~~~~-~~~~~~~~~a 252 (360)
T 3hdo_A 232 VIAALDKIRDH-YNLDRLAQAA 252 (360)
T ss_dssp HHHHHHHHSCS-CCSCHHHHHH
T ss_pred HHHHHHHhCCC-CCCCHHHHHH
Confidence 88888776553 3567777654
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.97 E-value=2.1e-32 Score=248.95 Aligned_cols=226 Identities=19% Similarity=0.188 Sum_probs=172.3
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh--c-CCCCCCCCCCCC-----HHHHHHHHHHHhhhCCCCCCC-CCE
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR--S-GKFNCYATNSGI-----PPARRAIADYLSRDLPYKLSA-DDV 110 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~--~-~~~~~Y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~-~~i 110 (301)
.++++|+|+.|+|+ ++.|+.+.+++.+... . .....|++..|. .+||+++|+|+.. +|..+.+ ++|
T Consensus 20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~i 94 (391)
T 3bwn_A 20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGV-VGNAATEDRYI 94 (391)
T ss_dssp TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHH-HCSBCCSSSEE
T ss_pred CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHh-cCCCCCCCCeE
Confidence 46789999999974 5556666665533221 1 134579998998 9999999999984 5767776 599
Q ss_pred EEcCCHHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEE
Q 022213 111 YVTLGCKQAVEVILSVLARPGA----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (301)
Q Consensus 111 ~~t~g~~~al~~~~~~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 186 (301)
++|+|+++++..++++++++|| +|++++|+|..|...++..|.+++.++++.+ + +. .++++++++
T Consensus 95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l 163 (391)
T 3bwn_A 95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV 163 (391)
T ss_dssp EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence 9999999999999999999999 9999999999999999999999888876432 2 22 246888999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEe
Q 022213 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (301)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~ 266 (301)
++||||||.+++ +|++.+++++++||+|++|.. + ...++.. ..+++|+++||||.|+++|+|+||+++
T Consensus 164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~ 231 (391)
T 3bwn_A 164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV 231 (391)
T ss_dssp ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence 999999999997 355522333499999999974 1 2223332 345789999999999999999999987
Q ss_pred eCCCCcccchhHHHHHHhhhc-ccCCCcccccccC
Q 022213 267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVCE 300 (301)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~ 300 (301)
++ ++++++++.... ...+++.+.|.++
T Consensus 232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~ 259 (391)
T 3bwn_A 232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRT 259 (391)
T ss_dssp CC-------HHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred cC-------HHHHHHHHHHhcccccCCCHHHHHHH
Confidence 33 257788877654 3457888888753
No 80
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.97 E-value=2.5e-31 Score=236.68 Aligned_cols=222 Identities=21% Similarity=0.321 Sum_probs=177.8
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHH
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (301)
+++|+|+.|.+. +++++.+.+++.+.+.......|+. .+..++|+++++++.+. .+++++|++|+|++++++
T Consensus 19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~ 90 (335)
T 1uu1_A 19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence 468999999853 5678899999988773333446866 47999999999999542 357789999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHH
Q 022213 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (301)
Q Consensus 122 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 201 (301)
.+++++ ||+|+++ |+|.++...++..|.+++.++++ .++.+|++.+ ++++++++++||||||.+++.++
T Consensus 91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~ 159 (335)
T 1uu1_A 91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_dssp HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence 999998 8999999 99999999999999999988874 3456777766 46888989999999999999888
Q ss_pred HHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHH
Q 022213 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281 (301)
Q Consensus 202 l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~ 281 (301)
+++|++.| | ++|+||+|..+.+. .. +..++..+++++++|+||.++++|+|+||++++ ++++++
T Consensus 160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~~ 223 (335)
T 1uu1_A 160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFIDA 223 (335)
T ss_dssp HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC--------HHHHHH
T ss_pred HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeC--------HHHHHH
Confidence 88888876 7 89999999986642 11 222344457899999999999999999999983 257777
Q ss_pred HHhhhcccCCCccccccc
Q 022213 282 IKDCLSIYSDIPTFIQVC 299 (301)
Q Consensus 282 ~~~~~~~~~~~~~~~q~~ 299 (301)
++..... .+++.++|.+
T Consensus 224 l~~~~~~-~~~~~~~~~~ 240 (335)
T 1uu1_A 224 YNRVRLP-FNVSYVSQMF 240 (335)
T ss_dssp HHHHSCT-TCSCHHHHHH
T ss_pred HHHhcCC-CCcCHHHHHH
Confidence 7765542 3667777765
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.97 E-value=1.4e-31 Score=246.27 Aligned_cols=224 Identities=16% Similarity=0.158 Sum_probs=179.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC--CCCCCCCC-C---CHHHHHHHHHHHhhhCCCCCCCCCEEEcC
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNS-G---IPPARRAIADYLSRDLPYKLSADDVYVTL 114 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~-g---~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (301)
...+|+|+.|+|. ++.++.+.+++.+.+.... ...|++.. | ..+||+++++|+.+..+..+++++|++|+
T Consensus 55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~ 130 (427)
T 2hox_A 55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV 130 (427)
T ss_dssp TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence 5578999999974 6667788888887763222 23498887 8 99999999999988766667899999999
Q ss_pred CHHHHHHHHHHHh--------cCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEE
Q 022213 115 GCKQAVEVILSVL--------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (301)
Q Consensus 115 g~~~al~~~~~~l--------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 186 (301)
|+++++..+++++ +++||.|+++.|+|..|...++..|.+++. +.+|++.|++.++++++++++
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~k~v~l 202 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEMV 202 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEEE
T ss_pred CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee--------ecCCHHHHHHhhcCCceEEEE
Confidence 9999999999999 899999999999999999999999988764 336788888888778899999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEe
Q 022213 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (301)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~ 266 (301)
++||||||.+++ +. ++ ++..|.|+.|.+ ...++..+. .+++|+++||||.++++|+|+||+++
T Consensus 203 ~~p~NPtG~~~~-~~-------l~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~ 265 (427)
T 2hox_A 203 TSPNNPEGLLRH-AV-------IK--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI 265 (427)
T ss_dssp ESSCTTTCCCCC-CS-------ST--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred cCCCCCcccccH-HH-------Hc--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence 999999999999 42 22 456777777642 223333333 45789999999999999999999998
Q ss_pred eCCCCcccchhHHHHHHhhhc-ccCCCcccccccC
Q 022213 267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVCE 300 (301)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~ 300 (301)
++ ++++++++.... ...+++.+.|.++
T Consensus 266 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~ 293 (427)
T 2hox_A 266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRS 293 (427)
T ss_dssp CC-------HHHHHHHHHHHHHHTSSCCHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 54 258888887754 3457888888753
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.96 E-value=4.1e-29 Score=227.25 Aligned_cols=230 Identities=17% Similarity=0.131 Sum_probs=181.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
++++|+|+.|+| +.+++++.+.+++.+.++.. ....|.+..|..++++++++++.+.++ .+++++|+|+++
T Consensus 42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt~ 114 (398)
T 3a2b_A 42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGFQ 114 (398)
T ss_dssp TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHHH
T ss_pred CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHHH
Confidence 567899999986 24557788999998887642 233466667888899999998887655 358999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc----CccEEEEcCCCCCcc
Q 022213 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPCG 194 (301)
Q Consensus 119 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~nptG 194 (301)
++..++++++++||.|+++.|+|..+...++..|.+++.++. .|++.+++.+++ +++++++++|+||||
T Consensus 115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG 187 (398)
T 3a2b_A 115 SNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG 187 (398)
T ss_dssp HHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred HHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 999999999999999999999999999999999999998875 588999998866 678899999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCC-EEEEecCcccCCCCcceeEEEEeeCCCCcc
Q 022213 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDPNGIF 273 (301)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~-vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~ 273 (301)
.+++ +++|+++|++||+++|+||+|+.+.++.........++..++ .++++|+||.++.+| ||++++.
T Consensus 188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~----- 256 (398)
T 3a2b_A 188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA----- 256 (398)
T ss_dssp CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH-----
T ss_pred CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH-----
Confidence 9998 889999999999999999999988764221111122222234 499999999999878 9999842
Q ss_pred cchhHHHHHHhh-hc-ccCCCcccccc
Q 022213 274 QKSGIIDSIKDC-LS-IYSDIPTFIQV 298 (301)
Q Consensus 274 ~~~~~~~~~~~~-~~-~~~~~~~~~q~ 298 (301)
+++++++.. .. ...+++.+.|.
T Consensus 257 ---~~~~~l~~~~~~~~~~~~~~~~~~ 280 (398)
T 3a2b_A 257 ---DVIDFLKHNARSVMFSASMTPASV 280 (398)
T ss_dssp ---HHHHHHHHHCHHHHSSBCCCHHHH
T ss_pred ---HHHHHHHHhcccceecCCCCHHHH
Confidence 477777664 22 23345556664
No 83
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.96 E-value=1.8e-27 Score=217.33 Aligned_cols=217 Identities=14% Similarity=0.073 Sum_probs=169.2
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHh---c-CCCCCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVR---S-GKFNCYATNSGIP---PARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 44 ~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~---~-~~~~~Y~~~~g~~---~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
...++.|+|+ ++.+..+.+++.+.++ . .....|+. .|.+ ++++++++++. . +++++++|+
T Consensus 20 ~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g------~--~~~i~~~~g 86 (404)
T 1e5e_A 20 DQFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK------T--EACVATSSG 86 (404)
T ss_dssp CTTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT------C--SEEEEESSH
T ss_pred CCCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC------C--CcEEEeCCh
Confidence 3578888875 4444444444444332 2 23446777 5666 89999999982 2 478888888
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCC
Q 022213 117 KQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192 (301)
Q Consensus 117 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~np 192 (301)
++++..++++++++||+|+++.|.|.++.. .++..|++++++++. |++.+++.++++++++++++|+||
T Consensus 87 ~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Np 159 (404)
T 1e5e_A 87 MGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANP 159 (404)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTT
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCC
Confidence 999999999999999999999999998877 678899999998763 778999999888999999999999
Q ss_pred cccCCCHHHHHHHHHHHHh-CCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCccee-EEEEeeCCC
Q 022213 193 CGNVFTYHHLQEIAEMARK-LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPN 270 (301)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rv-G~~~~~~~~ 270 (301)
||.+++ +++|+++|++ +|+++|+|++|..+.+.. ++ .+ +..+++.|+||.|+++|+|+ ||+++++
T Consensus 160 tG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~-- 226 (404)
T 1e5e_A 160 TLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN----PV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA-- 226 (404)
T ss_dssp TCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--
T ss_pred CCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC----cc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH--
Confidence 999998 8999999999 999999999999877641 22 12 35699999999999999998 9999854
Q ss_pred CcccchhHHH-HHHhhhcc--cCCCccccccc
Q 022213 271 GIFQKSGIID-SIKDCLSI--YSDIPTFIQVC 299 (301)
Q Consensus 271 ~~~~~~~~~~-~~~~~~~~--~~~~~~~~q~~ 299 (301)
+++. +++..... ..+.+++.|.+
T Consensus 227 ------~~~~~~l~~~~~~~~g~~~~~~~~~~ 252 (404)
T 1e5e_A 227 ------DLLQQIRMVGIKDITGSVISPHDAWL 252 (404)
T ss_dssp ------HHHHHHHHTCCCCCCCCCCCHHHHHH
T ss_pred ------HHHHHHHHHHHHhCCCCCCCHHHHHH
Confidence 3555 77665442 33456666543
No 84
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=1.7e-27 Score=217.46 Aligned_cols=211 Identities=15% Similarity=0.228 Sum_probs=169.4
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCC-CCCCEEE
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK------FNCYAT--NSGIPPARRAIADYLSRDLPYKL-SADDVYV 112 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~ 112 (301)
+++|+|+.|.+. +.|+.+.+++.+.+.... ...|++ ..+..++|+++++++. . ++++|++
T Consensus 27 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~~ 95 (420)
T 1t3i_A 27 HPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIVY 95 (420)
T ss_dssp EECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEEE
T ss_pred CceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEEE
Confidence 458999999863 456889999988886421 223543 3567889999999983 3 5689999
Q ss_pred cCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEE
Q 022213 113 TLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (301)
Q Consensus 113 t~g~~~al~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (301)
|+|+++|+..+++++ +++||+|+++.|+|.+ +...++..|.+++.++++ .++.+|++.+++.++++++++
T Consensus 96 ~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v 173 (420)
T 1t3i_A 96 TRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKLV 173 (420)
T ss_dssp ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEEE
T ss_pred cCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceEE
Confidence 999999999999999 8999999999999998 566677889999999875 456689999999998889999
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEE
Q 022213 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (301)
Q Consensus 185 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~ 264 (301)
++++|+||||.+++ +++|.++|+++|+++|+|++|..... ...+..+ +..+++.|+||.++.+| +||+
T Consensus 174 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~---~~di~~~s~sK~~~~~g--~G~~ 241 (420)
T 1t3i_A 174 TVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLI---DCDWLVASGHKMCAPTG--IGFL 241 (420)
T ss_dssp EEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEEE
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhc---CCCEEEEehhhhcCCCc--eEEE
Confidence 99999999999999 88999999999999999999986432 1122222 24589999999888777 9999
Q ss_pred EeeCCCCcccchhHHHHHHhh
Q 022213 265 VTNDPNGIFQKSGIIDSIKDC 285 (301)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~ 285 (301)
++++ +++++++..
T Consensus 242 ~~~~--------~~~~~~~~~ 254 (420)
T 1t3i_A 242 YGKE--------EILEAMPPF 254 (420)
T ss_dssp EECH--------HHHHHSCCC
T ss_pred EEch--------HHHhhcCce
Confidence 9843 466666544
No 85
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=3e-27 Score=212.49 Aligned_cols=205 Identities=14% Similarity=0.139 Sum_probs=160.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHH-HHHHHhhhCCCCCCCCCEE
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRA-IADYLSRDLPYKLSADDVY 111 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~~-ia~~l~~~~~~~~~~~~i~ 111 (301)
.++++.|+.|.+. .++++.+.+++.+.+.... ...|.+..+..++|++ +++++. .+ +|+
T Consensus 6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~ 73 (371)
T 2e7j_A 6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR 73 (371)
T ss_dssp --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence 5678999987642 4567889999888775421 1234456788999999 999983 23 999
Q ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc-----cCccEEEE
Q 022213 112 VTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-----KNTAAMVI 186 (301)
Q Consensus 112 ~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~l 186 (301)
+|+|+++++..++++++++||+|++++|+|.++...++..|.+++.++...+.++.+|++.+++.++ ++++++++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~ 153 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALI 153 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEE
Confidence 9999999999999999999999999999999998889999999999982223346799999999887 67889999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEe
Q 022213 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (301)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~ 266 (301)
++|+||||.+++ +++|+++|++||+++|+|++|...... .++..++. .++++|+||+++.++ |+||+++
T Consensus 154 ~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~~---di~~~s~sK~~~~~~-~~G~~~~ 222 (371)
T 2e7j_A 154 TYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIGA---DFIVGSGHKSMAASG-PIGVMGM 222 (371)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHTC---SEEEEEHHHHSSCCS-SCEEEEE
T ss_pred ECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcCC---CEEEecCCcCCCCCC-CcEEEEE
Confidence 999999999999 688999999999999999999985432 22333322 389999999977654 9999998
Q ss_pred eC
Q 022213 267 ND 268 (301)
Q Consensus 267 ~~ 268 (301)
++
T Consensus 223 ~~ 224 (371)
T 2e7j_A 223 KE 224 (371)
T ss_dssp CT
T ss_pred ec
Confidence 65
No 86
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.94 E-value=3.4e-26 Score=206.87 Aligned_cols=225 Identities=13% Similarity=0.108 Sum_probs=166.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhc-CC---CCCC--CCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcC
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK---FNCY--ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~-~~---~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (301)
+..+|+|+.|++ +.+++++.+.+++.+.++. +. ...| +...+..++|+++++++ +++ + .++++
T Consensus 38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~-~i~~~ 106 (384)
T 1bs0_A 38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL------GYS-R-ALLFI 106 (384)
T ss_dssp TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH------TCS-E-EEEES
T ss_pred CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh------CCC-c-EEEeC
Confidence 567899999874 2355678899999888764 21 1123 44456789999999998 233 4 44555
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccC---ccEEEEcCCCC
Q 022213 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN---TAAMVIINPGN 191 (301)
Q Consensus 115 g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~l~~p~n 191 (301)
++++++..++++++++||.|+++.|+|..+...++..|.+++.++. .|++.+++.+++. ++++++++|+|
T Consensus 107 sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n 179 (384)
T 1bs0_A 107 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS 179 (384)
T ss_dssp CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred CcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 5589999999999999999999999999998899999999988874 5789999888653 67788899999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCC
Q 022213 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (301)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~ 271 (301)
|||.+++ +++|+++|++||+++|+|++|+.+.++.........++.. ..++++|+||.++.+| ||++++.
T Consensus 180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~di~~~s~sK~~~~~G---G~~~~~~--- 249 (384)
T 1bs0_A 180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVK-PELLVVTFGKGFGVSG---AAVLCSS--- 249 (384)
T ss_dssp TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCC-CSEEEEESSSTTSSCC---EEEEECH---
T ss_pred CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCC-CcEEEeeccchhhccC---cEEEeCH---
Confidence 9999999 8889999999999999999998765531111111222222 2399999999998777 9999842
Q ss_pred cccchhHHHHHHhhh-cc--cCCCcccccc
Q 022213 272 IFQKSGIIDSIKDCL-SI--YSDIPTFIQV 298 (301)
Q Consensus 272 ~~~~~~~~~~~~~~~-~~--~~~~~~~~q~ 298 (301)
+++++++... .. ..+.+.+.|.
T Consensus 250 -----~~~~~l~~~~~~~~~~~~~~~~~~~ 274 (384)
T 1bs0_A 250 -----TVADYLLQFARHLIYSTSMPPAQAQ 274 (384)
T ss_dssp -----HHHHHHHHHCHHHHSSBCCCHHHHH
T ss_pred -----HHHHHHHHhchhhhcCCCCCHHHHH
Confidence 4777776642 21 2235555554
No 87
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.94 E-value=2e-26 Score=209.12 Aligned_cols=214 Identities=13% Similarity=0.092 Sum_probs=159.4
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC----CCC--CCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcC
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK----FNC--YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~----~~~--Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (301)
+..+|+|+.|+|. .+..++.+.+++.+.+.... ... |+...+..++|+.+++++. .+ +.|+++
T Consensus 42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~~-~~i~~~- 110 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------TD-DTILYS- 110 (399)
T ss_dssp TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------CS-EEEEES-
T ss_pred CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------CC-cEEEEC-
Confidence 4568999999752 24567888898888876411 111 2233336788999998882 22 445555
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------CccEEEEcC
Q 022213 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIIN 188 (301)
Q Consensus 115 g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~ 188 (301)
++++++..++.+++++||.|+++.|+|..+...++..|.+++.++. .|++.+++.+++ +++++++++
T Consensus 111 sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 111 SCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred chHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 5578999999999999999999999999999999999999998875 466788887765 788999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEEecCcccCCCCcceeEEEEee
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN 267 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~SK~~~~~G~rvG~~~~~ 267 (301)
|+||||.+++ +++|+++|++||+++|+|++|+...++.........++. ....++++|+||+++ |.+.||++++
T Consensus 184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~ 258 (399)
T 3tqx_A 184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH 258 (399)
T ss_dssp EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence 9999999999 889999999999999999999743333222111222221 234599999999987 4455999974
Q ss_pred CCCCcccchhHHHHHHhh
Q 022213 268 DPNGIFQKSGIIDSIKDC 285 (301)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~ 285 (301)
. ++++.++..
T Consensus 259 ~--------~~~~~~~~~ 268 (399)
T 3tqx_A 259 K--------EIIEWLRNR 268 (399)
T ss_dssp H--------HHHHHHHHH
T ss_pred H--------HHHHHHHHh
Confidence 3 477777665
No 88
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.94 E-value=1.5e-26 Score=209.79 Aligned_cols=197 Identities=13% Similarity=0.117 Sum_probs=158.4
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-CEEEcCCHHHHHHHHHHHhcCCCCEEEEc
Q 022213 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLP 137 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~Vl~~ 137 (301)
+.++.+.+++.+.+.. .|++. ..++++++++++.+.+|. +++ +|++|+|++++++.++++++++||+|+++
T Consensus 44 ~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~ 115 (393)
T 1vjo_A 44 NAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG 115 (393)
T ss_dssp CCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence 4567777777655431 46542 457788888888776663 567 89999999999999999999999999999
Q ss_pred CCCCcc--hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 022213 138 RPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 138 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
+|+|.+ +...++..|.+++.++++. ++.+|++.|++.+++ +++++++++|+||||.+++ +++|+++|+++|+
T Consensus 116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 190 (393)
T 1vjo_A 116 VAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGT 190 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTC
T ss_pred cCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCC
Confidence 999998 8888899999999998854 456899999999987 8899999999999999998 8899999999999
Q ss_pred eEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 215 ~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
++|+|++|.. +. .+..+. ..+..+++.|+||+++.+| |+||+++++ +++++++.
T Consensus 191 ~li~Dea~~~---g~-~~~~~~---~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~ 244 (393)
T 1vjo_A 191 LLLVDTVTSL---GG-VPIFLD---AWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQR 244 (393)
T ss_dssp EEEEECTTTT---TT-SCCCTT---TTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHT
T ss_pred EEEEECCccc---cC-cCCccc---ccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhc
Confidence 9999999993 21 222222 2234589999999989888 999999843 46666643
No 89
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.94 E-value=4.5e-26 Score=205.48 Aligned_cols=200 Identities=17% Similarity=0.156 Sum_probs=157.9
Q ss_pred eeccCCCCCCCCCCCChHHHHHHHHHHHhcCC--C---C--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--F---N--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 45 i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~--~---~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
+.|+.+.. .++++.+.+++.+.+.... . . .|....+..++|+++++++ ++++++|++|+|++
T Consensus 3 ~yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t 71 (384)
T 1eg5_A 3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT 71 (384)
T ss_dssp EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred EEEecCcc-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence 55666653 2567889999998886420 0 0 0122234578999999998 35678999999999
Q ss_pred HHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---HhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCC
Q 022213 118 QAVEVILSVLA----RPGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190 (301)
Q Consensus 118 ~al~~~~~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 190 (301)
+++..+++++. ++||+|+++.|+|+++...+ +..|.+++.++++. ++.+|+++|++.++++++++++++|+
T Consensus 72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 149 (384)
T 1eg5_A 72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN 149 (384)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence 99999999998 79999999999999875555 67899999988753 45689999999998888999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCC--CeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 191 NPCGNVFTYHHLQEIAEMARKLR--VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~--~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
||||.+++ +++|.++|+++| +++|+|++|+. +. .+..+..+ +..+++.|+||.++.+| +||+++++
T Consensus 150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~-~~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~ 217 (384)
T 1eg5_A 150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GK-IPFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRK 217 (384)
T ss_dssp TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TT-SCCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc---CC-cccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcC
Confidence 99999999 788888999999 99999999983 22 12223222 34589999999988888 79999865
Q ss_pred C
Q 022213 269 P 269 (301)
Q Consensus 269 ~ 269 (301)
.
T Consensus 218 ~ 218 (384)
T 1eg5_A 218 G 218 (384)
T ss_dssp T
T ss_pred C
Confidence 3
No 90
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.94 E-value=1.5e-25 Score=205.56 Aligned_cols=212 Identities=15% Similarity=0.155 Sum_probs=171.4
Q ss_pred CCCCCee--eccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCC
Q 022213 39 NDPRPVV--PLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (301)
Q Consensus 39 ~~~~~~i--~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (301)
..+.+++ +|+.|+|. ++.|+.+.+++.+.++.. .|++ ..+..++|+++++++. .+++++|+|
T Consensus 11 ~gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~g 75 (424)
T 2po3_A 11 FGGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCN 75 (424)
T ss_dssp GTCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESC
T ss_pred hcCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCC
Confidence 3455555 68889864 677889999999888753 4776 6788999999999993 258999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCccc
Q 022213 116 CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195 (301)
Q Consensus 116 ~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~ 195 (301)
++++++.+++++. +||+|+++.|+|.++...+...|.+++.+++++ +++.+|++.+++.+++++++++++ ||||.
T Consensus 76 gt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~ 150 (424)
T 2po3_A 76 ATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGV---HLWGR 150 (424)
T ss_dssp HHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEE---CGGGC
T ss_pred HHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEE---CCCCC
Confidence 9999999999985 789999999999999999999999999999864 356789999999998788888875 48999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEccCCc-ccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCccc
Q 022213 196 VFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274 (301)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~ 274 (301)
..+ +++|+++|+++|+++|+|++|. .+.+++. ++..+. + +++.||||..+++|.|+||+++++
T Consensus 151 ~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~------ 214 (424)
T 2po3_A 151 PCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLG---D-AEVFSFHATKAVNAFEGGAVVTDD------ 214 (424)
T ss_dssp CCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS---S-EEEEECCTTSSSCCSSCEEEEESC------
T ss_pred cCC---HHHHHHHHHHcCCEEEEECccccCCeECCe---eccccc---C-EEEEeCCCCCCccCCCCeEEEeCC------
Confidence 877 8889999999999999999999 4666542 222222 2 899999977677789999999853
Q ss_pred chhHHHHHHhhhc
Q 022213 275 KSGIIDSIKDCLS 287 (301)
Q Consensus 275 ~~~~~~~~~~~~~ 287 (301)
++++++++....
T Consensus 215 -~~l~~~l~~~~~ 226 (424)
T 2po3_A 215 -ADLAARIRALHN 226 (424)
T ss_dssp -HHHHHHHHHHHB
T ss_pred -HHHHHHHHHHHh
Confidence 247777766543
No 91
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.94 E-value=1.6e-26 Score=209.93 Aligned_cols=211 Identities=17% Similarity=0.232 Sum_probs=166.6
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC--CCC------CCCCCCCHHHHHHHHHHHhhhCCCCC-CCCCEE
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNC------YATNSGIPPARRAIADYLSRDLPYKL-SADDVY 111 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~--~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~ 111 (301)
+++++.|+.+.+. +.|+.+.+++.+.+.... ... |.+..+..++|+++++++. . ++++|+
T Consensus 21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~ 89 (406)
T 1kmj_A 21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN------ARSAEELV 89 (406)
T ss_dssp TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence 3568999999864 356788999988887431 111 1234467789999999883 3 568999
Q ss_pred EcCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcch----HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccE
Q 022213 112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYY----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (301)
Q Consensus 112 ~t~g~~~al~~~~~~l----~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (301)
+|+|+++++..+++++ +++||+|+++.|+|++. ...++..|.+++.++++. ++.+|++.+++.+++++++
T Consensus 90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~ 167 (406)
T 1kmj_A 90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL 167 (406)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence 9999999999999999 89999999999998754 344667899999998753 4568999999999888999
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEE
Q 022213 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263 (301)
Q Consensus 184 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~ 263 (301)
+++++|+||||.+++ +++|+++|++||+++|+|++|..... +..+..+ +..++++|+||.++.+| +||
T Consensus 168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~~~---~~d~~~~s~~K~~g~~G--~G~ 235 (406)
T 1kmj_A 168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQAL---DCDFYVFSGHKLYGPTG--IGI 235 (406)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCccccc---CCCEEEEEchhccCCCC--cEE
Confidence 999999999999999 88999999999999999999986321 1122222 34589999999998888 899
Q ss_pred EEeeCCCCcccchhHHHHHHh
Q 022213 264 LVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~ 284 (301)
++++. +++++++.
T Consensus 236 ~~~~~--------~~~~~~~~ 248 (406)
T 1kmj_A 236 LYVKE--------ALLQEMPP 248 (406)
T ss_dssp EEECH--------HHHHHCCC
T ss_pred EEEeH--------HHHhhcCC
Confidence 99842 46666654
No 92
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.94 E-value=4.3e-26 Score=206.18 Aligned_cols=205 Identities=17% Similarity=0.103 Sum_probs=161.8
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC-C--C---CCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcC
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-F--N---CYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~-~--~---~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (301)
++++.|+.+.+ .+.|+.+.+++.+.+.... . . .|+. ..+..++|+.+++++ ++++++|++|+
T Consensus 15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~ 83 (390)
T 1elu_A 15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD 83 (390)
T ss_dssp TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence 46899998864 2456788888888776421 0 0 2433 246788999999998 35678999999
Q ss_pred CHHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHH----HHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCC
Q 022213 115 GCKQAVEVILSVL-ARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189 (301)
Q Consensus 115 g~~~al~~~~~~l-~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 189 (301)
|++++++.+++++ +++||+|+++.|+|.++... ++..|.+++.++++.++++.+|++.+++.++++++++++++|
T Consensus 84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 163 (390)
T 1elu_A 84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL 163 (390)
T ss_dssp SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence 9999999999999 79999999999999987543 466799999998754356779999999999888899999999
Q ss_pred CCCcccCCCHHHHHHHHHHHH----hCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEE
Q 022213 190 GNPCGNVFTYHHLQEIAEMAR----KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~----~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~ 265 (301)
+||||.+++ +++|.++|+ ++|+++|+|++|.... ....+. .....+++.|+||. ..+|.|+||++
T Consensus 164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~~---~~~~d~~~~s~~K~-~~~~~g~G~~~ 232 (390)
T 1elu_A 164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDFS---RLEVDYYAFTGHKW-FAGPAGVGGLY 232 (390)
T ss_dssp CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCTT---TSCCSEEEEESSST-TCCCTTCEEEE
T ss_pred ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCChh---hcCCCEEEcccccc-ccCCCceEEEE
Confidence 999999999 888899999 9999999999998522 111222 22345889999994 45667799999
Q ss_pred eeC
Q 022213 266 TND 268 (301)
Q Consensus 266 ~~~ 268 (301)
+++
T Consensus 233 ~~~ 235 (390)
T 1elu_A 233 IHG 235 (390)
T ss_dssp ECT
T ss_pred ECH
Confidence 864
No 93
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.93 E-value=2.9e-26 Score=206.61 Aligned_cols=229 Identities=14% Similarity=0.089 Sum_probs=165.4
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
++..+++|+.|.|.. .++ +++.+.+++.+.++.. ....|+. .+..++++++++++ | + +++|++|+|+
T Consensus 26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~l~~~la~~~----g--~-~~~v~~~~g~ 95 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYEN-PWQEELAHKLVKHF----W--T-EGKVFFANSG 95 (375)
T ss_dssp TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBCC-HHHHHHHHHHHHTS----S--S-CEEEEEESSH
T ss_pred CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccCC-HHHHHHHHHHHhhc----C--C-CCeEEEeCch
Confidence 467899999997631 255 6788999999888642 1235643 46788999999886 2 3 3899999999
Q ss_pred HHHHHHHHHH---hc---CCC-CEEEEcCCCCcchHHHHHhcCce-------------EEEeecCCCCCCCCCHHHHHhh
Q 022213 117 KQAVEVILSV---LA---RPG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVEAL 176 (301)
Q Consensus 117 ~~al~~~~~~---l~---~~g-d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~ 176 (301)
++++..++++ +. ++| |+|++++|+|+++...+...+.. +..++. .|+++|++.
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 168 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL 168 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence 9999999975 35 788 99999999999875544443321 222221 589999999
Q ss_pred cccCccEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCC
Q 022213 177 ADKNTAAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (301)
Q Consensus 177 ~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~ 255 (301)
++++++++++++|+||||.+ .+.+++++|+++|++||+++|+|++|.++.+.+. ...+..++...+++ ||||.++
T Consensus 169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~d~~---s~SK~~~ 244 (375)
T 2eh6_A 169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE-FYAYQHFNLKPDVI---ALAKGLG 244 (375)
T ss_dssp CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGTCCCSEE---EECGGGG
T ss_pred hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-chhhhhcCCCCCEE---EEccccc
Confidence 98888999999999999999 5688999999999999999999999997654332 22333333223444 8889988
Q ss_pred CCcceeEEEEeeCCCCcccchhHHHHHHhhh-cccCCCcccccc
Q 022213 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQV 298 (301)
Q Consensus 256 ~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~ 298 (301)
+|+|+||+++++ +++++++... ....+.+.+.|.
T Consensus 245 -~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 279 (375)
T 2eh6_A 245 -GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACR 279 (375)
T ss_dssp -TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHH
T ss_pred -CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHH
Confidence 699999999854 3555555421 122244555554
No 94
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.93 E-value=1.2e-25 Score=202.93 Aligned_cols=190 Identities=14% Similarity=0.101 Sum_probs=152.2
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC
Q 022213 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~ 138 (301)
+.++.+.+++.+.+. ..|++. ..++++++++++.+.+|.. +++++++|+|+++|+..++++++++||+|+++.
T Consensus 30 ~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~ 102 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTI 102 (386)
T ss_dssp CCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEc
Confidence 445667666654432 245442 3678888888887766654 467899999999999999999999999999999
Q ss_pred CCCcc--hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc--ccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 022213 139 PGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA--DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 139 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
|+|.+ +...++..|.+++.++++. ++.+|++.|++.+ .++++++++++|+||||.+.+ +++|+++|++||+
T Consensus 103 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 177 (386)
T 2dr1_A 103 IGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDK 177 (386)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred CCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCC
Confidence 99998 8888889999999998754 4569999999988 457899999999999999998 8999999999999
Q ss_pred eEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 215 ~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
++|+|++|+.+.+. .++.. .+..++++|+||++++++ ++||+++++
T Consensus 178 ~li~D~a~~~~~~~----~~~~~---~~~di~~~s~sK~~~~~~-g~G~~~~~~ 223 (386)
T 2dr1_A 178 LVFVDAVSAMGGAD----IKFDK---WGLDVVFSSSQKAFGVPP-GLAIGAFSE 223 (386)
T ss_dssp EEEEECTTTBTTBC----CCTTT---TTCSEEEEETTSTTCCCS-SCEEEEECH
T ss_pred eEEEEccccccCcc----ccccc---cCCcEEEEeccccccCCC-ceEEEEECH
Confidence 99999999975542 12222 234599999999988763 399999853
No 95
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.93 E-value=3.3e-25 Score=201.80 Aligned_cols=217 Identities=17% Similarity=0.170 Sum_probs=157.1
Q ss_pred eeccCCCCCCCCCCCChHHHHHHHHHHHh---c-CCCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVR---S-GKFNCYA--TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 45 i~l~~g~p~~~p~~~~~~~~~~~~~~~~~---~-~~~~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
-.++.|+|+ +..+..+.+++.+++. . .....|. +..+..++++.+++++ + . +++++++++++
T Consensus 23 ~~~~~~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~--~~~i~~~sG~~ 90 (398)
T 2rfv_A 23 STGALSTPI----FQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLE----R--G--EAGLATASGIS 90 (398)
T ss_dssp TTCCSSCCC----CCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHH----T--C--SEEEEESSHHH
T ss_pred CCCCcCCCC----cCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHh----C--C--CcEEEECCHHH
Confidence 357788765 3333333333333332 1 1222343 2234567777777777 2 2 25666666779
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcc
Q 022213 119 AVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCG 194 (301)
Q Consensus 119 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG 194 (301)
++..++++++++||+|+++.|+|.++...+ +..|.+++.++. .|++.+++.++++++++++++|+||||
T Consensus 91 a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG 163 (398)
T 2rfv_A 91 AITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA-------AKPEEIRAAMRPETKVVYIETPANPTL 163 (398)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT-------TSHHHHHHHCCTTEEEEEEESSBTTTT
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC-------CCHHHHHHhcCCCCeEEEEECCCCCCC
Confidence 999999999999999999999999887665 778999998876 289999999988899999999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCccee-EEEEeeCCCCcc
Q 022213 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIF 273 (301)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rv-G~~~~~~~~~~~ 273 (301)
.+++ +++|+++|++||+++|+|++|....+.. ++ .+ +..+++.|+||.++++|.|+ ||+++++
T Consensus 164 ~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~----- 227 (398)
T 2rfv_A 164 SLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ----- 227 (398)
T ss_dssp BCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH-----
T ss_pred cccC---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH-----
Confidence 9998 8999999999999999999999766532 12 12 24599999999999999999 9999854
Q ss_pred cchhHHH-HHHhhhc-c-cCCCccccccc
Q 022213 274 QKSGIID-SIKDCLS-I-YSDIPTFIQVC 299 (301)
Q Consensus 274 ~~~~~~~-~~~~~~~-~-~~~~~~~~q~~ 299 (301)
+++. .++.... . ..+.+.+.|.+
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (398)
T 2rfv_A 228 ---EFIDQARFVGLKDITGGCMSPFNAWL 253 (398)
T ss_dssp ---HHHHHHHHTHHHHTTCCCCCHHHHHH
T ss_pred ---HHHHHHHHHHHHhCCCCCCCHHHHHH
Confidence 3554 5554433 2 23455555543
No 96
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.93 E-value=6.2e-25 Score=201.79 Aligned_cols=205 Identities=20% Similarity=0.164 Sum_probs=158.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhc-CC-CCCCCCCCCC----HHHHHHHHHHHhhhCCCCCCCCCEEEc
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK-FNCYATNSGI----PPARRAIADYLSRDLPYKLSADDVYVT 113 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~-~~-~~~Y~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (301)
+++.+|+|+.|++ ..+..++.+.+++.+++.. +. ...|....|. .+|++.+++++ + . ++.+++
T Consensus 62 ~g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~----g--~--~~~i~~ 130 (427)
T 2w8t_A 62 RGKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY----G--T--TGAIVF 130 (427)
T ss_dssp TTEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH----T--C--SEEEEE
T ss_pred CCceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh----C--C--CceEEe
Confidence 3566899999975 2355678899999888864 21 2223333343 67888888887 2 2 356677
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc----CccEEEEcCC
Q 022213 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINP 189 (301)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p 189 (301)
+++++++..++.+++++||.|+++.|+|.++...++..|.+++.++. .|++.|++.+++ ++++|+++++
T Consensus 131 ~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~ 203 (427)
T 2w8t_A 131 STGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGV 203 (427)
T ss_dssp SCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred cCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 77788999999999999999999999999999999999999888763 689999998865 6788999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC-CCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-VPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~-~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+||||.+.+ +++|.++|++||+++|+||+|..+.++.........++.. +.+++++||||.++++| ||++++.
T Consensus 204 ~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~ 277 (427)
T 2w8t_A 204 YSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH 277 (427)
T ss_dssp ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence 999999999 8899999999999999999999987753211111112211 23699999999998777 9999854
No 97
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.93 E-value=6.2e-25 Score=201.01 Aligned_cols=204 Identities=17% Similarity=0.186 Sum_probs=158.0
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCC------------CCCHHHHHHHHHHHhhhCCCCCC
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN------------SGIPPARRAIADYLSRDLPYKLS 106 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~------------~g~~~lr~~ia~~l~~~~~~~~~ 106 (301)
..++++|.|+.+.+. ++++.+.+++.+.+.... .|+.+ ....++++.+++++ +.+
T Consensus 18 ~~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~ 84 (423)
T 3lvm_A 18 RAMKLPIYLDYSATT-----PVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GAD 84 (423)
T ss_dssp --CCSSEECBTTTCC-----CCCHHHHHHHTTSSSTTS--CCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCC
T ss_pred cccCCCEeecCCCcC-----CCCHHHHHHHHHHHhhcc--cccCCCccccchhHHHHHHHHHHHHHHHHHc------CCC
Confidence 347888999988753 457788888877765111 22221 12356777888777 457
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcC----CCCEEEEcCCCCcchHHHH---HhcCceEEEeecCCCCCCCCCHHHHHhhccc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLAR----PGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADK 179 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~----~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (301)
+++|++|+|+++|++.+++++.+ +||+|+++.|+|+++...+ ...|.+++.++++. ++.+|++.+++.+++
T Consensus 85 ~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 162 (423)
T 3lvm_A 85 PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD 162 (423)
T ss_dssp GGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred CCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC
Confidence 78999999999999999998874 7999999999999886666 45599999998754 556899999999988
Q ss_pred CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcc
Q 022213 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259 (301)
Q Consensus 180 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~ 259 (301)
+++++++++|+||||.+++ +++|+++|+++|+++|+|++|..... ...+..+ +..+++.|+||.++.+|
T Consensus 163 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~sK~~g~~g- 231 (423)
T 3lvm_A 163 DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PIDLSQL---KVDLMSFSGHKIYGPKG- 231 (423)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTS---CCSEEEEESTTTTSCSS-
T ss_pred CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcChhhc---CCCEEEechHHhcCCCC-
Confidence 8999999999999999999 88899999999999999999875221 1122222 23489999999877666
Q ss_pred eeEEEEeeCC
Q 022213 260 RFGWLVTNDP 269 (301)
Q Consensus 260 rvG~~~~~~~ 269 (301)
+||+++++.
T Consensus 232 -~G~~~~~~~ 240 (423)
T 3lvm_A 232 -IGALYVRRK 240 (423)
T ss_dssp -CEEEEECBT
T ss_pred -eEEEEEecc
Confidence 899998653
No 98
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.93 E-value=2.2e-25 Score=202.64 Aligned_cols=227 Identities=12% Similarity=0.112 Sum_probs=166.3
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhc-CCC---CCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEc
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GKF---NCYA--TNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~-~~~---~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (301)
++..+|+|+.|+|. + +..++.+.+++.+.++. ... ..|. ...+..++|+++++++ +.+ +.|+++
T Consensus 43 ~g~~~id~~~~~~~--g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i~~~ 112 (401)
T 1fc4_A 43 DGSHVINFCANNYL--G-LANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAILYS 112 (401)
T ss_dssp TSCEEEECCCSCTT--S-CTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEEEES
T ss_pred CCccEEEeeccCcc--c-ccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEEEeC
Confidence 46789999999752 1 22578899999888764 211 1221 1346788999999998 233 455555
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------CccEEEEc
Q 022213 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVII 187 (301)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~ 187 (301)
++++++..++++++++||.|+++.|+|..+...++..|.+++.++. .|++.+++.+++ ++++++++
T Consensus 113 -sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 113 -SCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp -CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred -ChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence 5578999999999999999999999998888888889999988863 578899888764 68899999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCc-cccc-CCCCCCCccccCCCCCEEEEecCcccC-CCCcceeEEE
Q 022213 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTF-GSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWL 264 (301)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~-~~~~-~~~~~~~~~~~~~~~~vi~~~s~SK~~-~~~G~rvG~~ 264 (301)
+|+||||.+++ +++|.++|+++|+++|+|++|+ ++.+ .+..+.+...+.. +..++++|+||.+ +.+| ||+
T Consensus 185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~ 257 (401)
T 1fc4_A 185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT 257 (401)
T ss_dssp SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence 99999999999 8999999999999999999996 6653 3322221112222 3459999999998 5565 999
Q ss_pred EeeCCCCcccchhHHHHHHhhhc---ccCCCccccccc
Q 022213 265 VTNDPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQVC 299 (301)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~ 299 (301)
+++. +++++++.... ...+.+.+.|.+
T Consensus 258 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a 287 (401)
T 1fc4_A 258 AARK--------EVVEWLRQRSRPYLFSNSLAPAIVAA 287 (401)
T ss_dssp EECH--------HHHHHHHHHCHHHHHSCCCCHHHHHH
T ss_pred EcCH--------HHHHHHHHhCcCceeCCCCCHHHHHH
Confidence 9832 47777766431 123455555543
No 99
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.93 E-value=7.1e-25 Score=198.60 Aligned_cols=190 Identities=21% Similarity=0.261 Sum_probs=152.7
Q ss_pred CCCC-h---HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHh-cCCC
Q 022213 57 CFRT-A---VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPG 131 (301)
Q Consensus 57 ~~~~-~---~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~g 131 (301)
+|+. | +.+.+++.++++...+ .|.+..+..++|+++++++.. + +.|++++| ++|++.+++++ +++|
T Consensus 8 ~f~~~p~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~~------~-~~i~~~sG-t~al~~~l~~l~~~~g 78 (388)
T 1b9h_A 8 EFPAWPQYDDAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHGA------A-HALAVTNG-THALELALQVMGVGPG 78 (388)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTTC------S-EEEEESCH-HHHHHHHHHHTTCCTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhCC------C-eEEEeCCH-HHHHHHHHHHcCCCCc
Confidence 4554 4 7899999999876433 466667889999999999832 2 45666665 89999999999 8999
Q ss_pred CEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 022213 132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (301)
Q Consensus 132 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~ 211 (301)
|+|+++.|+|.++...++..|.+++.++++++ ++.+|++.+++.+++++++|+ |+||||.+.+ +++|.++|++
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~ 151 (388)
T 1b9h_A 79 TEVIVPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISAD 151 (388)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHH
Confidence 99999999999999999999999999998643 467999999999987776655 9999999988 8888899999
Q ss_pred CCCeEEEccCCcc-cccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 212 LRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 212 ~~~~ii~D~~y~~-~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
+|+++|+|++|+. ..+.+. .+..+. .+.+.||||..+++|.|+||+++++.
T Consensus 152 ~~~~li~D~a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 152 TGVPLLQDAAHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp HTCCBCEECTTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred cCCEEEEecchhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCH
Confidence 9999999999986 333322 122222 48889999777777789999998653
No 100
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.93 E-value=2.8e-25 Score=205.56 Aligned_cols=245 Identities=13% Similarity=0.111 Sum_probs=170.5
Q ss_pred chhhhcCCcccHHHHHHHHHhhcccCCCCCeeeccCCCC--CCCCC---CCChHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 022213 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP--TAFPC---FRTAVEAEDAIVDAVRSGKFNCYATNSGIPP 88 (301)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p--~~~p~---~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 88 (301)
+.+++..+++.+..+...... + +..+.++++|+.|++ +.... .+.++.+.+++. .. ...|.+..+..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~~~~~~ 79 (456)
T 2ez2_A 7 PFRIKSVETVSMIPRDERLKK-M-QEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGSENFYH 79 (456)
T ss_dssp SSCCCCCCCCCCCCHHHHHHH-H-HHTTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSCHHHHH
T ss_pred CeeeeeecccCCCCHHHHHHH-H-HHCCCCcccCCcccceeeeccccCCccCCHHHHHHhh----cc-hhhcccChhHHH
Confidence 445555666644332221111 1 112556777777765 32111 133455555543 22 235877778899
Q ss_pred HHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCC-cchHHHHHhcCceEEEeecCC----C
Q 022213 89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-PYYEGIAQRKQVEVRHFDLLP----E 163 (301)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~----~ 163 (301)
||+++++++. .+++++|+|+++|+..++++++++|| +++.|+| ..+...+...|.+++.+++.. +
T Consensus 80 l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~ 149 (456)
T 2ez2_A 80 LERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAG 149 (456)
T ss_dssp HHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTT
T ss_pred HHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEeccccccccc
Confidence 9999999982 34899999999999999999999999 7888999 777788889999999998752 1
Q ss_pred C----CCCCCHHHHHhhcccCc----cEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCeEEEccCCcc----------
Q 022213 164 R----NWEVDLDAVEALADKNT----AAMVIINPGN-PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH---------- 224 (301)
Q Consensus 164 ~----~~~~~~~~l~~~~~~~~----~~v~l~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~---------- 224 (301)
. ++.+|+++|++++++++ +++++++|+| |||.+++.+++++|+++|++||+++|+|++|..
T Consensus 150 ~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~ 229 (456)
T 2ez2_A 150 LNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQE 229 (456)
T ss_dssp CCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHS
T ss_pred ccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccc
Confidence 2 36789999999887655 7888899998 999999999999999999999999999999986
Q ss_pred cccCCCCCCCcc-ccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhh
Q 022213 225 LTFGSIPYTPMG-LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC 285 (301)
Q Consensus 225 ~~~~~~~~~~~~-~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~ 285 (301)
+.+.+....++. ......+++++ |++|. +++| |.||+++++ ++++++++..
T Consensus 230 ~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~-------~~~~~~~~~~ 281 (456)
T 2ez2_A 230 QGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND-------DEMFSSAKEL 281 (456)
T ss_dssp TTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-------HHHHHHHHHH
T ss_pred cccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-------HHHHHHHHHH
Confidence 345443211110 01112345555 78887 5567 789998743 2466666554
No 101
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.93 E-value=1.4e-25 Score=204.19 Aligned_cols=230 Identities=15% Similarity=0.167 Sum_probs=160.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
.+++.+++|+.|.+..+-.+ .++.+.+++.+++..... ..|.. ....++++.+++++ ..++|++|+|+
T Consensus 36 ~~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~--------~~~~v~~~~gg 105 (406)
T 4adb_A 36 QQGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSG 105 (406)
T ss_dssp TTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSCC-HHHHHHHHHHHHHS--------SCSEEEEESSH
T ss_pred CCCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCcCC-HHHHHHHHHHHhhC--------CCCeEEEeCcH
Confidence 35778999998832111122 467889999988864211 11221 12344555555544 34599999999
Q ss_pred HHHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhcCc-------------eEEEeecCCCCCCCCCHHHHHh
Q 022213 117 KQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEVDLDAVEA 175 (301)
Q Consensus 117 ~~al~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~ 175 (301)
++|++.++++++. +| |+|++++|+|+++.......+. ++..++. .|++.|++
T Consensus 106 ~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 178 (406)
T 4adb_A 106 AEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASA 178 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHH
Confidence 9999999998875 66 9999999999987544443332 2333322 47999999
Q ss_pred hcccCccEEEEcCCCCCcccCC--CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCccc
Q 022213 176 LADKNTAAMVIINPGNPCGNVF--TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR 253 (301)
Q Consensus 176 ~~~~~~~~v~l~~p~nptG~~~--~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~ 253 (301)
.+++++++++++ |+||||.++ +.+++++|+++|++||+++|+||+|.++.+.+..+ .+..++...+++ ||||.
T Consensus 179 ~l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~ 253 (406)
T 4adb_A 179 LIDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKA 253 (406)
T ss_dssp TCSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGG
T ss_pred HhcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechh
Confidence 998788888877 999999998 99999999999999999999999999876655322 233333334555 67999
Q ss_pred CCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 254 ~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
++ +|+|+||++++. +++++++.... ...+.+++.|.+
T Consensus 254 ~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a 291 (406)
T 4adb_A 254 LG-GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAV 291 (406)
T ss_dssp GG-TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHH
T ss_pred hc-CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHH
Confidence 98 999999998743 46666665432 233556666654
No 102
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.93 E-value=5.1e-25 Score=201.07 Aligned_cols=205 Identities=13% Similarity=0.137 Sum_probs=157.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC--CC----CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEc
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FN----CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~--~~----~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (301)
+++.+++|+.+++. .++.++.+.+++.++++... .. .|+......++++++++++. .+..+++
T Consensus 57 ~g~~~ld~~s~~~l---~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~ 125 (409)
T 3kki_A 57 ASPDDIILQSNDYL---ALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FDECLLS 125 (409)
T ss_dssp CCTTSEECCCSCTT---CCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CSEEEEE
T ss_pred CCCceEEeeccCcc---CCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--------CCeEEEe
Confidence 46778999887642 46667899999999887521 11 12333446788888888872 2234556
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCC
Q 022213 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNP 192 (301)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~np 192 (301)
+++++++..++.+++++||.|+++.|+|..+...+...|.+++.++. .|++++++.+++ +++++++++|+||
T Consensus 126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~np 198 (409)
T 3kki_A 126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYST 198 (409)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTT
T ss_pred cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 66689999999999999999999999999999889999999887764 689999998875 5789999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC-CCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-VPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~-~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
||.+.+ +++|+++|++||+++|+||+|....++.........++.. ...|++.|+||+++++| ||++++.
T Consensus 199 tG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~ 269 (409)
T 3kki_A 199 LGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN 269 (409)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH
Confidence 999999 8899999999999999999999865532211111112211 23488999999998775 9998754
No 103
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.92 E-value=1.9e-25 Score=207.13 Aligned_cols=221 Identities=19% Similarity=0.167 Sum_probs=163.0
Q ss_pred CCeeeccCC-CCCCCCCCCChHHHHHHHHHH---HhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 42 RPVVPLGYG-DPTAFPCFRTAVEAEDAIVDA---VRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 42 ~~~i~l~~g-~p~~~p~~~~~~~~~~~~~~~---~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
.++|+|+.| +| +++.|+.+.++.... ........|+. .|.+ +++++++++.+.++ .+++++++|++
T Consensus 89 ~~~i~l~~g~~~----~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~-~g~~-~~~~l~~~la~~~g----~~~~i~~~sGt 158 (464)
T 1ibj_A 89 TLLVNLDNKFDP----FDAMSTPLYQTATFKQPSAIENGPYDYTR-SGNP-TRDALESLLAKLDK----ADRAFCFTSGM 158 (464)
T ss_dssp HHHTCCCCSSCT----TCCSSCCCCCCSBCCCSSSSCCCSCSBTT-TCCH-HHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred CeEEECCCCCCC----CCCCCccHHhhhhhhhhcccccCCccccC-CCCH-HHHHHHHHHHHHhC----CCeEEEECCHH
Confidence 457899987 64 355565565554422 11122345763 4655 77778887777555 24788888889
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCc
Q 022213 118 QAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (301)
Q Consensus 118 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 193 (301)
+++..++. ++++||+|+++.|.|.++... ++..|.+++.++. .|++++++.++++++++++++|+|||
T Consensus 159 ~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~-------~d~~~l~~~i~~~tk~v~l~~p~Npt 230 (464)
T 1ibj_A 159 AALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT-------TKLDEVAAAIGPQTKLVWLESPTNPR 230 (464)
T ss_dssp HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT-------TSHHHHHHHCCSSEEEEEECSSCTTT
T ss_pred HHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCC-------CCHHHHHHHhccCceEEEEeCCCCCC
Confidence 99998886 778999999999999988653 4567999998876 28899999998889999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCC-cceeEEEEeeCCCCc
Q 022213 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGI 272 (301)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~-G~rvG~~~~~~~~~~ 272 (301)
|.+++ +++|+++|++||+++|+|++|.... ...++. + +..|+++|+||.++.+ |+|+||++++++
T Consensus 231 G~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~~--- 296 (464)
T 1ibj_A 231 QQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKGE--- 296 (464)
T ss_dssp CCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECSH---
T ss_pred CEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEEChH---
Confidence 99998 8999999999999999999997522 112222 2 3469999999998765 999999998542
Q ss_pred ccchhHHHHHHhhhc-ccCCCcccccc
Q 022213 273 FQKSGIIDSIKDCLS-IYSDIPTFIQV 298 (301)
Q Consensus 273 ~~~~~~~~~~~~~~~-~~~~~~~~~q~ 298 (301)
+++++++.... ...+.+++.|.
T Consensus 297 ----~l~~~l~~~~~~~g~~~~~~~~~ 319 (464)
T 1ibj_A 297 ----KLAKEVYFLQNSEGSGLAPFDCW 319 (464)
T ss_dssp ----HHHHHHHHHHHHTTCBCCHHHHH
T ss_pred ----HHHHHHHHHHHhcCCCCCHHHHH
Confidence 46677766543 23345555554
No 104
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.92 E-value=1.3e-25 Score=205.76 Aligned_cols=239 Identities=11% Similarity=0.027 Sum_probs=165.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
+++.+++|+.|.+...-.+ +++.+.+++.++++.... ..|.+..+..+||+++++++. + . .+++|++|+|++
T Consensus 39 ~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~ 112 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS 112 (426)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred CCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence 4677899988863211112 567889999988864321 145566678899999999982 2 1 348999999999
Q ss_pred HHHHHHHH---HhcCCCCEEEEcCCCCcchH-HHHHhcCce-------------EEEeecCC---CCCCCCCHHHHHhhc
Q 022213 118 QAVEVILS---VLARPGANVLLPRPGWPYYE-GIAQRKQVE-------------VRHFDLLP---ERNWEVDLDAVEALA 177 (301)
Q Consensus 118 ~al~~~~~---~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~-------------~~~~~~~~---~~~~~~~~~~l~~~~ 177 (301)
++++.+++ .+.++| .|++++|+|+++. ..+...|.+ ++.+++.. ..++.+|++.|++.+
T Consensus 113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l 191 (426)
T 1sff_A 113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF 191 (426)
T ss_dssp HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence 99999988 677776 8999999998754 345555532 55566532 112346889999887
Q ss_pred c-----cCccEEEE-cCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecC
Q 022213 178 D-----KNTAAMVI-INPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (301)
Q Consensus 178 ~-----~~~~~v~l-~~p~nptG-~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~ 250 (301)
+ .+++++++ ++++| || .+.+.+++++|.++|++||+++|+||+|.++.+.+. ...+..++.. +.+.||
T Consensus 192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~---~di~s~ 266 (426)
T 1sff_A 192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT-LFAMEQMGVA---PDLTTF 266 (426)
T ss_dssp HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTSC---CSEEEE
T ss_pred HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc-hhhhhhcCCC---CCEEEE
Confidence 6 34455555 34577 99 788999999999999999999999999998766543 2222222222 223499
Q ss_pred cccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 251 SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
||.++. |+|+||+++++ ++++.++.... ...+.++++|.+
T Consensus 267 sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a 307 (426)
T 1sff_A 267 AKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVA 307 (426)
T ss_dssp CGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHH
T ss_pred cccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHH
Confidence 999986 99999999854 35555543222 233456666654
No 105
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.92 E-value=1.3e-24 Score=196.38 Aligned_cols=215 Identities=12% Similarity=0.040 Sum_probs=157.3
Q ss_pred CC-CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 41 PR-PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 41 ~~-~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
+. ++|+++.|.|. .++++.+.+++. .|..+ ..+++.+++++.+.+|.. +++++++++|++++
T Consensus 26 g~~~v~~~~~~~~~----~~~~~~v~~a~~---------~~~~~---~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a 88 (374)
T 2aeu_A 26 GRDALYDLSGLSGG----FLIDEKDKALLN---------TYIGS---SYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA 88 (374)
T ss_dssp CGGGCEECSSCCCC----CCCCHHHHHHHT---------STTHH---HHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred CccceeeecccCCC----CCCCHHHHHHHH---------HhcCc---hHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence 55 79999998753 567788877764 12211 345566666665544532 34789999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccE-EEEcCCCCCccc
Q 022213 120 VEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA-MVIINPGNPCGN 195 (301)
Q Consensus 120 l~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-v~l~~p~nptG~ 195 (301)
+..+++++ +||+|+++.|+|+++.. .++..|.+++.+ .|++.+++. ++++++ +++++|+||||.
T Consensus 89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~ 156 (374)
T 2aeu_A 89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI 156 (374)
T ss_dssp HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence 99999988 99999999998876433 567789988876 278999988 778899 899999999997
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccc
Q 022213 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (301)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~ 275 (301)
+..++++|+++|++||+++|+|++|+.+..+.....+...+. ..++++|+||. ++|+|+||++++.
T Consensus 157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~---~di~~~S~sK~--l~g~~~G~~~~~~------- 222 (374)
T 2aeu_A 157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKL--MEGPRGGLLAGKK------- 222 (374)
T ss_dssp --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSS--SSSCSCEEEEEEH-------
T ss_pred --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccC---CcEEEecCccc--ccCcceEEEEECH-------
Confidence 778899999999999999999999987642000001011122 24889999998 4578999998853
Q ss_pred hhHHHHHHhhhcc-cCCCccccccc
Q 022213 276 SGIIDSIKDCLSI-YSDIPTFIQVC 299 (301)
Q Consensus 276 ~~~~~~~~~~~~~-~~~~~~~~q~~ 299 (301)
+++++++..... ..+++++.|.+
T Consensus 223 -~~~~~l~~~~~~~~~~~~~~~~~a 246 (374)
T 2aeu_A 223 -ELVDKIYIEGTKFGLEAQPPLLAG 246 (374)
T ss_dssp -HHHHHHHHHHHTTTCBCCHHHHHH
T ss_pred -HHHHHHHHhhccccCCCCHHHHHH
Confidence 477777766542 33455555543
No 106
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.92 E-value=2.2e-24 Score=194.43 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=149.0
Q ss_pred CChHHHHHHHHHHHhcCC---CCCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhc---
Q 022213 59 RTAVEAEDAIVDAVRSGK---FNCYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA--- 128 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~---~~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~--- 128 (301)
++++.+.+++.+.+.... ...|.. ..+..++|+++++++ +.++++|++|+|+++|+..++.++.
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~l~~~~ 84 (382)
T 4eb5_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAMRN 84 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHHHHHHHHHHHHhhc
Confidence 467889999998886411 111332 124567888888887 3466799999999999999999998
Q ss_pred -CCCCEEEEcCCCCcchHHHHH---hcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHH
Q 022213 129 -RPGANVLLPRPGWPYYEGIAQ---RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204 (301)
Q Consensus 129 -~~gd~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 204 (301)
++||+|++++|+|+++...+. ..|.+++.++++. ++.+|++.+++.++++++++++++|+||||.+++ +++
T Consensus 85 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~ 159 (382)
T 4eb5_A 85 ARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEE 159 (382)
T ss_dssp GGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHH
T ss_pred cCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HHH
Confidence 899999999999998765554 3699999998853 4568999999999888899999999999999999 789
Q ss_pred HHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 205 i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
|+++|+++|++ |+|++|... ..+..+..+ +..++++|+||.++.+| +||+++++.
T Consensus 160 i~~l~~~~~~~-i~D~a~~~g----~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~ 214 (382)
T 4eb5_A 160 ISEVLAGKAAL-HIDATASVG----QIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKE 214 (382)
T ss_dssp HHHHHTTSSEE-EEECTTTBT----TBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETT
T ss_pred HHHHHHHCCCE-EEEcchhcC----CcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccc
Confidence 99999999999 999999841 122222222 23489999999977666 799988764
No 107
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.92 E-value=6.2e-24 Score=192.00 Aligned_cols=200 Identities=11% Similarity=0.049 Sum_probs=154.6
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCC--------
Q 022213 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP-------- 130 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~-------- 130 (301)
++++.+.+++.+.+.... ..|....+..++++++.+++.+.++ .++++|++|+|+++++..+++++.++
T Consensus 41 ~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~ 117 (397)
T 3f9t_A 41 NVLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKG 117 (397)
T ss_dssp CCCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhc
Confidence 344678888888776321 1222112445666666666666555 46789999999999999999999876
Q ss_pred -----CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHH
Q 022213 131 -----GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQE 204 (301)
Q Consensus 131 -----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~ 204 (301)
||+|+++.|+|.++...++..|.+++.++++. ++.+|++.+++.+++ +++++++++|+||||.+.+ +++
T Consensus 118 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~ 192 (397)
T 3f9t_A 118 LSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEE 192 (397)
T ss_dssp CCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHH
T ss_pred ccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHH
Confidence 99999999999999999999999999998854 466899999999988 8999999999999999998 888
Q ss_pred HHHHHHhCCCeEEEccCCcccccCCCCC--------CCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 205 IAEMARKLRVMVVADEVYGHLTFGSIPY--------TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 205 i~~~~~~~~~~ii~D~~y~~~~~~~~~~--------~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
|.++|++||+++|+|++|..+.++.... .++ .+.. ...+++.|++|. +++|.|+||+++++.
T Consensus 193 i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~ 262 (397)
T 3f9t_A 193 LSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-DFSL-GVDSITIDPHKM-GHCPIPSGGILFKDI 262 (397)
T ss_dssp HHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-SGGG-TCSEEECCTTTT-TCCCSSCEEEEESSG
T ss_pred HHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-cccc-cCCeEEEccccc-cCCCCCceEEEEeCH
Confidence 9999999999999999998765421110 011 1111 234888999997 567889999998654
No 108
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.92 E-value=2.5e-24 Score=192.33 Aligned_cols=209 Identities=13% Similarity=0.059 Sum_probs=162.6
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
.+.+|+|+.+.+. ++++.+.+++.+.+. +|....|..++++++++++.+.+| .++++|++|+|+++++
T Consensus 12 ~p~~i~l~~~~~~-----~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~ 79 (359)
T 1svv_A 12 KPKPYSFVNDYSV-----GMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN 79 (359)
T ss_dssp ---CEECSCSCSS-----CCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred CCeeEEecCCCcC-----CCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence 4678999986542 467889999988875 476667888899999998888666 5678999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHH--HHHhcCceEEEeecCCCCCCCCCHHHHHhhcccC-------ccEEEEcCCCC
Q 022213 121 EVILSVLARPGANVLLPRPGWPYYEG--IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-------TAAMVIINPGN 191 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~v~l~~p~n 191 (301)
..++++++++||+|++++|+|.++.. .++..|.+++.++.+ ++.+|++.+++.++++ ++++++++| |
T Consensus 80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ 155 (359)
T 1svv_A 80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T 155 (359)
T ss_dssp HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence 99999999999999999999998866 478889999999863 5679999999988765 788889998 7
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
|||.+++.+++++|+++|++||+++|+|++|..+.++.... ....+.- ...-++..|.+|. +.+ .++|+++++.
T Consensus 156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~ 230 (359)
T 1svv_A 156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND 230 (359)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG
T ss_pred CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc
Confidence 99999999999999999999999999999995543321111 1111000 0012778899997 443 5689998743
No 109
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=3.2e-24 Score=196.93 Aligned_cols=201 Identities=19% Similarity=0.192 Sum_probs=142.8
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCC---------CCHHHHHHHHHHHhhhCCCCCCCCCEEE
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNS---------GIPPARRAIADYLSRDLPYKLSADDVYV 112 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 112 (301)
.+++.|+.+.+. ++++.+.+++.+.+.. ...|+... ...++|+++++++ ++++++|++
T Consensus 17 ~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~ 83 (432)
T 3a9z_A 17 NRKVYMDYNATT-----PLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDIIF 83 (432)
T ss_dssp -CCEECBTTTCC-----CCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred CCcEEeeCCccC-----CCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEEE
Confidence 567889888753 5578899999888764 22343311 1258999999988 356789999
Q ss_pred cCCHHHHHHHHHHHhc--------CCCCEEEEcCCCCcch-----------------HHHHHhcCceEEEeecCCCCCCC
Q 022213 113 TLGCKQAVEVILSVLA--------RPGANVLLPRPGWPYY-----------------EGIAQRKQVEVRHFDLLPERNWE 167 (301)
Q Consensus 113 t~g~~~al~~~~~~l~--------~~gd~Vl~~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~ 167 (301)
|+|+++++..++++++ ++||+|+++.|+|..+ ....+..|.+++.++++.+ ++.
T Consensus 84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~ 162 (432)
T 3a9z_A 84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQ 162 (432)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSS
T ss_pred eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCC
Confidence 9999999999999986 5899999999999865 3334557899999987542 346
Q ss_pred CCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC----------CeEEEccCCcccccCCCCCCCccc
Q 022213 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR----------VMVVADEVYGHLTFGSIPYTPMGL 237 (301)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~ii~D~~y~~~~~~~~~~~~~~~ 237 (301)
+|++.|++.++++++++++++|+||||.+++ +++|.++|++++ +++|+|++|+... ....+..
T Consensus 163 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~ 235 (432)
T 3a9z_A 163 VEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVED 235 (432)
T ss_dssp CCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHH
T ss_pred cCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhh
Confidence 8999999999888899999999999999999 667888888998 9999999997632 2222222
Q ss_pred cCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 238 ~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
... + +++.|+||.+ |.|+||+++++.
T Consensus 236 ~~~--d-~~~~s~~K~~---g~~~G~~~~~~~ 261 (432)
T 3a9z_A 236 LGV--D-FLTIVGHKFY---GPRIGALYVRGV 261 (432)
T ss_dssp HCC--S-EEEEEGGGTT---CCSCEEEEETTB
T ss_pred cCC--C-EEEEehhHhc---CCcceEEEEccc
Confidence 222 2 6689999986 357999998653
No 110
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.92 E-value=1e-24 Score=198.35 Aligned_cols=213 Identities=16% Similarity=0.129 Sum_probs=158.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhc-CC-----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcC
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (301)
++++++|..++.. .++.++.+.+++.+++.. .. ...|+...+..++|+++++++. . +++|++++
T Consensus 45 g~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~s 114 (401)
T 2bwn_A 45 KQDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSS 114 (401)
T ss_dssp EEEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESC
T ss_pred CCcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECC
Confidence 3556888776642 244456799999888864 11 1235555578899999999982 2 46788877
Q ss_pred CHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc----cCccEEEEcC
Q 022213 115 GCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIIN 188 (301)
Q Consensus 115 g~~~al~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~ 188 (301)
|++ ++..++..+. .+||+|+++.|+|.++...++..|.+++.++.+ |++.+++.++ ++++++++++
T Consensus 115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~ 186 (401)
T 2bwn_A 115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES 186 (401)
T ss_dssp HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence 766 7777777654 589999999999999988888999999988752 6788888775 4688999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC-CCCEEEEecCcccCCCCcceeEEEEee
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN 267 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~SK~~~~~G~rvG~~~~~ 267 (301)
|+||||.+++ +++|+++|++||+++|+|++|....++......+...+. ....++++|+||.++++| ||++++
T Consensus 187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~ 260 (401)
T 2bwn_A 187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS 260 (401)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence 9999999999 889999999999999999999965554221111111111 123589999999999888 999874
Q ss_pred CCCCcccchhHHHHHHhh
Q 022213 268 DPNGIFQKSGIIDSIKDC 285 (301)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~ 285 (301)
. ++++.++..
T Consensus 261 ~--------~~~~~l~~~ 270 (401)
T 2bwn_A 261 A--------RMVDAVRSY 270 (401)
T ss_dssp H--------HHHHHHHHH
T ss_pred H--------HHHHHHHHh
Confidence 2 466666643
No 111
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.92 E-value=1.1e-24 Score=197.21 Aligned_cols=207 Identities=14% Similarity=0.047 Sum_probs=153.9
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (301)
+.+.|..+.| .++++.+.+++.+.+.. ...|....+..++|+++++++ +.++++|++|+|+++++..
T Consensus 8 ~~~yl~~~~~-----~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 8 DPVITLTAGP-----VNAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEA 74 (392)
T ss_dssp CCSEECSSSC-----CCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHH
T ss_pred CcceeecCCC-----cCCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHH
Confidence 4456666654 35567787877665542 111112234577888888887 3457899999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcch--HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc--cCccEEEEcCCCCCcccCCC
Q 022213 123 ILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 123 ~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~p~nptG~~~~ 198 (301)
++++++++||+|+++.|+|+++ ...++..|.+++.++++.+ +.+|++.+++.++ ++++++++++|+||||.+++
T Consensus 75 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 152 (392)
T 2z9v_A 75 AAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP 152 (392)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC
T ss_pred HHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc
Confidence 9999999999999999999875 3444567999999987543 4589999999884 47889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccC-CCCcceeEEEEeeCCCCcccchh
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSG 277 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~-~~~G~rvG~~~~~~~~~~~~~~~ 277 (301)
+++|.++|+++|+++|+|++|+... ....+..+ +..++++|+||++ +.+| +||+++++ +
T Consensus 153 ---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~~~g--~G~l~~~~--------~ 212 (392)
T 2z9v_A 153 ---IDAIGALVSAHGAYLIVDAVSSFGG----MKTHPEDC---KADIYVTGPNKCLGAPPG--LTMMGVSE--------R 212 (392)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTBTT----BSCCGGGG---TCSEEEECSSSTTCCCSC--CEEEEECH--------H
T ss_pred ---HHHHHHHHHHcCCeEEEEcccccCC----cccccccc---cceEEEecCcccccCCCc--eeEEEECH--------H
Confidence 7899999999999999999998421 12223222 2348899999964 3455 59999843 4
Q ss_pred HHHHHHh
Q 022213 278 IIDSIKD 284 (301)
Q Consensus 278 ~~~~~~~ 284 (301)
++++++.
T Consensus 213 ~~~~l~~ 219 (392)
T 2z9v_A 213 AWAKMKA 219 (392)
T ss_dssp HHHHHHT
T ss_pred HHHHhhh
Confidence 6666653
No 112
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.92 E-value=1.2e-24 Score=197.19 Aligned_cols=207 Identities=12% Similarity=0.084 Sum_probs=158.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCC-CEEEcCCHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK 117 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~ 117 (301)
....++++.|. +++++.+.+++.+.+.. .|.+ ..+..++|+++++++ +.+++ +|++|+|++
T Consensus 17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t 80 (393)
T 2huf_A 17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGH 80 (393)
T ss_dssp CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHH
T ss_pred CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHH
Confidence 45667777773 45677888877665432 2322 235678888888888 34554 899999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcc
Q 022213 118 QAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCG 194 (301)
Q Consensus 118 ~al~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG 194 (301)
+++..++++++++||+|+++.|+|+++ ...++..|.+++.++++. ++.+|++.+++.+++ +++++++++|+||||
T Consensus 81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 158 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG 158 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence 999999999999999999999999874 334566899999999754 346899999999987 899999999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCccc-CCCCcceeEEEEeeCCCCcc
Q 022213 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR-WLVPGWRFGWLVTNDPNGIF 273 (301)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~-~~~~G~rvG~~~~~~~~~~~ 273 (301)
.+++ +++|+++|+++|+++|+|+++.... .+..+.. .+..+++.|+||+ ++.+|+ ||+++++
T Consensus 159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~---~~~d~~~~s~sK~l~g~~G~--G~~~~~~----- 221 (393)
T 2huf_A 159 VLQG---LEGVGALCHQHNCLLIVDTVASLGG----APMFMDR---WEIDAMYTGSQKVLGAPPGI--TPVSFSH----- 221 (393)
T ss_dssp EECC---CTTHHHHHHHTTCEEEEECTTTBTT----BCCCTTT---TTCSEEECCSSSTTCCCSSC--EEEEECH-----
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCcchhh---cCccEEEECCCcccccCCCe--EEEEECH-----
Confidence 9999 8899999999999999999986421 1222222 2345889999997 456786 9999842
Q ss_pred cchhHHHHHHhh
Q 022213 274 QKSGIIDSIKDC 285 (301)
Q Consensus 274 ~~~~~~~~~~~~ 285 (301)
+++++++..
T Consensus 222 ---~~~~~~~~~ 230 (393)
T 2huf_A 222 ---RAVERYKRR 230 (393)
T ss_dssp ---HHHHHHHTC
T ss_pred ---HHHHHHhhc
Confidence 477777653
No 113
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.92 E-value=1.3e-23 Score=188.88 Aligned_cols=188 Identities=16% Similarity=0.130 Sum_probs=143.6
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCC-----CC----CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhc-
Q 022213 59 RTAVEAEDAIVDAVRSGKFNCYATN-----SG----IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA- 128 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~Y~~~-----~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~- 128 (301)
++++.+.+++.+.+... ..++.. .+ ..++++.+++++ +.++++|++|+|+++++..++++++
T Consensus 11 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~~~~ 82 (382)
T 4hvk_A 11 PVDERILEAMLPYMTES--FGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAM 82 (382)
T ss_dssp CCCHHHHHHHHHHHHTS--CCCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhh--cCCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCchHHHHHHHHHhhh
Confidence 45678999999888642 112211 11 225666666665 3467789999999999999999998
Q ss_pred ---CCCCEEEEcCCCCcchHHHHH---hcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHH
Q 022213 129 ---RPGANVLLPRPGWPYYEGIAQ---RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL 202 (301)
Q Consensus 129 ---~~gd~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l 202 (301)
++||+|+++.+.|+++...+. ..|.+++.++++. ++.+|++++++.++++++++++++|+||||.+.+ +
T Consensus 83 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~ 157 (382)
T 4hvk_A 83 RNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---V 157 (382)
T ss_dssp HHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---H
T ss_pred hhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---H
Confidence 899999999999998765444 4699999998853 4568999999999888999999999999999999 7
Q ss_pred HHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 203 ~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
++|+++|++||+ +|+|++|.... ....+..++ ..+++.|+||.++.+| +|++++++.
T Consensus 158 ~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~g~~g--~g~~~~~~~ 214 (382)
T 4hvk_A 158 EEISEVLAGKAA-LHIDATASVGQ----IEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKE 214 (382)
T ss_dssp HHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHHT---CSEEEEESGGGTSCTT--CEEEEEETT
T ss_pred HHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhcC---CCEEEEeHHHhcCCCc--eEEEEEcCc
Confidence 889999999999 99999987522 111222222 2489999999877666 677776654
No 114
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.92 E-value=1.1e-23 Score=192.85 Aligned_cols=200 Identities=18% Similarity=0.220 Sum_probs=152.6
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHh-cCCCCEEEEcC
Q 022213 60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPR 138 (301)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~ 138 (301)
.++.+.+++.++++......|++..|..++++++.+.+.+.+|. + ++++++++++++..++.++ +++||+|+++.
T Consensus 14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~--~--~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~ 89 (418)
T 2c81_A 14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV--P--YCVPTTSGSTALMLALEALGIGEGDEVIVPS 89 (418)
T ss_dssp CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC--S--EEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC--C--cEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence 46889999999887655445877667444444444444333332 2 5677778899999999999 89999999999
Q ss_pred CCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 139 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
|+|.++...++..|.+++.+++++ .++.+|++.+++.++++++++++ +||||...+ +++|.++|+++|+++|+
T Consensus 90 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~~~---~~~i~~~~~~~~~~li~ 162 (418)
T 2c81_A 90 LTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIP---VHLFGSMAN---MDEINEIAQEHNLFVIE 162 (418)
T ss_dssp SSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECC---BCCTTCCCC---HHHHHHHHHHTTCEEEE
T ss_pred CccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEE---eCCcCCccc---HHHHHHHHHHCCCEEEE
Confidence 999999999999999999998854 35679999999999877887765 458999877 88899999999999999
Q ss_pred ccCCcccc-cCCCCCCCccccCCCCCEEEEecC--cccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhh
Q 022213 219 DEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 219 D~~y~~~~-~~~~~~~~~~~~~~~~~vi~~~s~--SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
|++|..+. +++.. +..+. + +.+.|| ||.++. | |+||++++++ +++++++...
T Consensus 163 D~a~~~~~~~~~~~---~~~~~---~-~~~~s~s~~K~~~~-g-~~g~~~~~~~-------~l~~~~~~~~ 217 (418)
T 2c81_A 163 DCAQSHGSVWNNQR---AGTIG---D-IGAFSCQQGKVLTA-G-EGGIIVTKNP-------RLFELIQQLR 217 (418)
T ss_dssp ECTTCTTCEETTEE---TTSSS---S-EEEEECCTTSSSCS-S-SCEEEEESCH-------HHHHHHHHHH
T ss_pred ECcccccCccCCEe---ccccc---c-eEEEeccCCcccCC-C-CeEEEEECCH-------HHHHHHHHHH
Confidence 99999876 54322 22222 1 677777 999887 8 9999998542 4666666543
No 115
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2.7e-24 Score=195.69 Aligned_cols=200 Identities=14% Similarity=0.093 Sum_probs=155.4
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC---CCCCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCC
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK---FNCYA----TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~---~~~Y~----~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (301)
+++.|+.+.+. ++++.+.+++.+.+.... ...|. ...+..++|+++++++ +.++++|++|+|
T Consensus 26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g 94 (406)
T 3cai_A 26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD 94 (406)
T ss_dssp SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 47888888753 456789999988886421 11232 1235678899999998 356789999999
Q ss_pred HHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHH----hcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcC
Q 022213 116 CKQAVEVILSVL---ARPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188 (301)
Q Consensus 116 ~~~al~~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 188 (301)
+++++..+++++ +++||+|+++.|+|.++...+. ..|.+++.+++++ .++.+|++.|++.++++++++++++
T Consensus 95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~ 173 (406)
T 3cai_A 95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVNS 173 (406)
T ss_dssp HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEES
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEeC
Confidence 999999999988 7899999999999997644433 3699999998763 3456899999999988899999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeE-EEEee
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG-WLVTN 267 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG-~~~~~ 267 (301)
|+||||.+++ +++|.++|+++|+++|+|++|.... .+..+..++ ..+++.|+||.++ ++ +| |++++
T Consensus 174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~ 240 (406)
T 3cai_A 174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY----RLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRD 240 (406)
T ss_dssp BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT----CCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEe
Confidence 9999999999 7889999999999999999998421 112222222 3488999999864 54 99 99874
No 116
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=6e-25 Score=195.94 Aligned_cols=214 Identities=18% Similarity=0.208 Sum_probs=153.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
+..+|+|+.+... + +++.+.+++.+.... ...|.+..+..+||+++++++. .+++++++|+++++
T Consensus 2 ~~~~i~~~~~~~~----~-p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~ 66 (347)
T 1jg8_A 2 PHMMIDLRSDTVT----K-PTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGN 66 (347)
T ss_dssp ---CEECSCGGGC----C-CCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHH
T ss_pred CceEEEeccccCC----C-CCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHH
Confidence 3467899999742 3 446777777544321 1257766688899999999982 24678888999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchH---HHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------CccEEEEcCCCC
Q 022213 121 EVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGN 191 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~n 191 (301)
.+++.+++++||+|+++.|+|.... ..+...|.+++++ .. .++.+|++++++.+++ +++++++++|||
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n 143 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN 143 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence 9999999999999999999997532 2567789998887 32 2455899999998875 578899999999
Q ss_pred Cc-ccCCCHHHHHHHHHHHHhCCCeEEEccCCccc--ccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 192 PC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHL--TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 192 pt-G~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~--~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
|| |.+++.+++++|+++|+++|+++|+|++|... .+.+.....+. ...+ .++.|+||+++++ +||+++.+
T Consensus 144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~l~~~---~G~~~~~~ 216 (347)
T 1jg8_A 144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA---GYAD-SVMFCLSKGLCAP---VGSVVVGD 216 (347)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCS-EEEEESSSTTCCS---SCEEEEEC
T ss_pred ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc---cccc-EEEEecccccCCC---ceEEEEcC
Confidence 99 99999999999999999999999999987532 11121111111 1112 3345899998754 67544333
Q ss_pred CCCcccchhHHHHHHhhh
Q 022213 269 PNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~ 286 (301)
++++++++...
T Consensus 217 -------~~~~~~~~~~~ 227 (347)
T 1jg8_A 217 -------RDFIERARKAR 227 (347)
T ss_dssp -------HHHHHHHHHHH
T ss_pred -------HHHHHHHHHHH
Confidence 24666665543
No 117
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.92 E-value=2.4e-24 Score=196.06 Aligned_cols=206 Identities=19% Similarity=0.197 Sum_probs=164.7
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHH
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (301)
.++|+|+.|.|. + ++.+.+++.+.+... .|.+..+..++|+++++++.. +++++++|+++++.
T Consensus 30 ~~~id~~~~~~~----~--~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~~--------~~~v~~~~Gt~a~~ 92 (399)
T 2oga_A 30 VPFLDLKAAYEE----L--RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCET--------DHAVGVNSGMDALQ 92 (399)
T ss_dssp BCSCCHHHHHHH----T--HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTTS--------SEEEEESCHHHHHH
T ss_pred CcccccCcCCCC----C--CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHCC--------CeEEEecCHHHHHH
Confidence 578999999753 2 378889998888643 576656788999999999832 36788888899999
Q ss_pred HHHHHh-cCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHH
Q 022213 122 VILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (301)
Q Consensus 122 ~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 200 (301)
.+++++ +++||+|+++.|+|.++...++..|.+++.+++++ +++.+|++.+++.+++++++++ |+||||...+
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~-- 166 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD-- 166 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence 999999 89999999999999999999999999999998854 2467999999999987777665 6789999988
Q ss_pred HHHHHHHHHHhCCCeEEEccCCcccc-cCCCCCCCccccCCCCCEEEEecC--cccCCCCcceeEEEEeeCCCCcccchh
Q 022213 201 HLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~D~~y~~~~-~~~~~~~~~~~~~~~~~vi~~~s~--SK~~~~~G~rvG~~~~~~~~~~~~~~~ 277 (301)
+++|.++|+++|+++|+|++|..+. +++.. +..+. .+++.|+ ||.++.+| |+||++++++ +
T Consensus 167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~~-------~ 230 (399)
T 2oga_A 167 -MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGDP-------E 230 (399)
T ss_dssp -HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCTT----CEEEEECCTTSSSCCSS-CCEEEEESCH-------H
T ss_pred -HHHHHHHHHHcCCEEEEECcccccCccCCee---ccccc----CEEEEeCCCCccCCcCC-ceEEEEeCCH-------H
Confidence 8888999999999999999998753 32221 22221 2888898 79998889 9999997542 4
Q ss_pred HHHHHHhhh
Q 022213 278 IIDSIKDCL 286 (301)
Q Consensus 278 ~~~~~~~~~ 286 (301)
++++++...
T Consensus 231 ~~~~l~~~~ 239 (399)
T 2oga_A 231 LAERLRMLR 239 (399)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 767776543
No 118
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.91 E-value=3.2e-24 Score=194.91 Aligned_cols=207 Identities=14% Similarity=0.141 Sum_probs=152.3
Q ss_pred CCCCeeeccCC---CCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 40 DPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 40 ~~~~~i~l~~g---~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
++..+++|+.| +|. .+ .++.+.+++.++++.... +.. ....++++++++.+.+.++ .+++++|+|+
T Consensus 38 ~g~~~ld~~~~~~~~~l---g~-~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg 106 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVL---GH-SHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTG 106 (397)
T ss_dssp TCCEEEESSHHHHTCTT---CB-TCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSH
T ss_pred CCCEEEECCcccccccc---CC-CCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCH
Confidence 46778999887 431 12 467899999988874321 111 1112445555555544333 5799999999
Q ss_pred HHHHHHHHHHhcC------C-CCEEEEcCCCCcch-HHHHHhcCce------------EEEeecCCCCCCCCCHHHHHhh
Q 022213 117 KQAVEVILSVLAR------P-GANVLLPRPGWPYY-EGIAQRKQVE------------VRHFDLLPERNWEVDLDAVEAL 176 (301)
Q Consensus 117 ~~al~~~~~~l~~------~-gd~Vl~~~p~~~~~-~~~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~ 176 (301)
++|+..+++++.. + ++.|++++|+|++. ...+...|.+ +..++. .|++.+++.
T Consensus 107 ~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~ 179 (397)
T 2ord_A 107 TEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRK 179 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHH
Confidence 9999999998864 5 47899999999764 4466666665 555543 389999999
Q ss_pred cccCccEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCC
Q 022213 177 ADKNTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (301)
Q Consensus 177 ~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~ 255 (301)
++++++++++++|+||||. +++.+++++|+++|++||+++|+||+|.++.+.+. ..++..++...+++ ||||.++
T Consensus 180 l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~d~~---s~sK~~~ 255 (397)
T 2ord_A 180 MSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK-LFAYQKYGVVPDVL---TTAKGLG 255 (397)
T ss_dssp CCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHTCCCSEE---EECGGGG
T ss_pred hhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc-chhhhhhCCCCCee---eeccccC
Confidence 9888899999999999999 99999999999999999999999999997766543 22333333223444 7899988
Q ss_pred CCcceeEEEEeeCC
Q 022213 256 VPGWRFGWLVTNDP 269 (301)
Q Consensus 256 ~~G~rvG~~~~~~~ 269 (301)
+|+|+||+++++.
T Consensus 256 -~G~r~G~~~~~~~ 268 (397)
T 2ord_A 256 -GGVPIGAVIVNER 268 (397)
T ss_dssp -TTSCCEEEEECST
T ss_pred -CCcCeEEEEEchH
Confidence 8999999998653
No 119
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.91 E-value=3.8e-24 Score=194.05 Aligned_cols=230 Identities=15% Similarity=0.076 Sum_probs=159.8
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFN-CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
+++.+++|+.+.+... ++ .++.+.+++.+++...... .+.+.....++++.+++++ ..+++++|+|++
T Consensus 34 ~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt 103 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVN--QGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGA 103 (392)
T ss_dssp TCCEEEESSHHHHTCT--TCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred CCCEEEEcCCChhhhc--cCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHH
Confidence 5778999988743211 11 4688999999888643211 1112234567777777776 267999999999
Q ss_pred HHHHHHHHHhcCC----------CCEEEEcCCCCcchHHHHHhcCce-------------EEEeecCCCCCCCCCHHHHH
Q 022213 118 QAVEVILSVLARP----------GANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVE 174 (301)
Q Consensus 118 ~al~~~~~~l~~~----------gd~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~ 174 (301)
+|++.+++.+..+ +|+|+++.|+|+++...+...+.. +..++. .|++.++
T Consensus 104 ~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 176 (392)
T 3ruy_A 104 EAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALK 176 (392)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHH
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHH
Confidence 9999999987654 689999999998765444433221 333322 2799999
Q ss_pred hhcccCccEEEEcCCCCCcccCCCHHH-HHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCccc
Q 022213 175 ALADKNTAAMVIINPGNPCGNVFTYHH-LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR 253 (301)
Q Consensus 175 ~~~~~~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~ 253 (301)
+.++++++++++++|+||||.+++.++ +++|+++|++||+++|+||+|..+.+.+... ....++...+++ ++||.
T Consensus 177 ~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~ 252 (392)
T 3ruy_A 177 AAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKA 252 (392)
T ss_dssp HHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGG
T ss_pred HHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchh
Confidence 999888999999999999999996655 9999999999999999999998776655322 233333333444 77898
Q ss_pred CCCCc-ceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 254 WLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 254 ~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
++ +| +|+||++++. +++++++.... ...+.+.+.|.+
T Consensus 253 l~-gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a 291 (392)
T 3ruy_A 253 LG-GGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAV 291 (392)
T ss_dssp GG-TTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHH
T ss_pred hh-CChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHH
Confidence 43 36 9999999843 35555554332 233455555543
No 120
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.91 E-value=2.3e-24 Score=195.61 Aligned_cols=237 Identities=14% Similarity=0.088 Sum_probs=156.5
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
++..+++|+.|.+.. .+. .++.+.+++.++++.... ..| +.....++++.+++++ + .++++|++|+|+
T Consensus 43 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~~~gg 113 (395)
T 1vef_A 43 EGNEYIDCVGGYGVA--NLGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL----P--PELNRVFPVNSG 113 (395)
T ss_dssp TSCEEEESSHHHHTC--TTCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEEESSH
T ss_pred CCCEEEEccCccccc--cCCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc----C--CCcCEEEEcCcH
Confidence 466789998885321 133 678899999988874321 123 2223345555555554 3 467899999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCCcc-hHHHHHhcCceEEE---eecCCCCC--CCCCHHHHHhhcccCccEEEEcC
Q 022213 117 KQAVEVILSVLA--RPGANVLLPRPGWPY-YEGIAQRKQVEVRH---FDLLPERN--WEVDLDAVEALADKNTAAMVIIN 188 (301)
Q Consensus 117 ~~al~~~~~~l~--~~gd~Vl~~~p~~~~-~~~~~~~~g~~~~~---~~~~~~~~--~~~~~~~l~~~~~~~~~~v~l~~ 188 (301)
++|+..+++++. .+||.|++++|+|++ +...+...|.+... .++..+.. ...|++++++.+++++++++++.
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~ 193 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEP 193 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECS
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeC
Confidence 999999998874 578999999999975 34455556654210 11110000 01589999999987777777666
Q ss_pred CCCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEee
Q 022213 189 PGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (301)
Q Consensus 189 p~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~ 267 (301)
++||||.++ +.+++++|+++|++||+++|+|++|.++.+.+.. .++...+...+++ ||||.++. |+|+||++++
T Consensus 194 ~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~ 268 (395)
T 1vef_A 194 VQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKR-FAFEHFGIVPDIL---TLAKALGG-GVPLGVAVMR 268 (395)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCSEE---EECGGGGT-TSSCEEEEEE
T ss_pred ccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCch-hHhhhcCCCCCEE---EEcccccC-CCceEEEEeh
Confidence 688999865 6888999999999999999999999975543322 1222222223344 88999886 9999999985
Q ss_pred CCCCcccchhHHHHHHhhhc-ccCCCcccccc
Q 022213 268 DPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQV 298 (301)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 298 (301)
+ +++++++.... ...+.+.+.|.
T Consensus 269 ~--------~~~~~l~~~~~~~~~~~~~~~~~ 292 (395)
T 1vef_A 269 E--------EVARSMPKGGHGTTFGGNPLAMA 292 (395)
T ss_dssp H--------HHHHTSCTTSSCCSSTTCHHHHH
T ss_pred H--------HHHhhhccCCcCCCcCCCHHHHH
Confidence 4 35555544211 12234555553
No 121
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.91 E-value=1.7e-23 Score=190.01 Aligned_cols=202 Identities=17% Similarity=0.130 Sum_probs=149.4
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC---CCCCCCCC----CCCHHHHHHHHHHHhhhCCCCCCCCCEEEc
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---KFNCYATN----SGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~---~~~~Y~~~----~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (301)
..++|.|+.+.+. ++++.+.+++.+.+... ....|... ....++++.+++++ +.++++|++|
T Consensus 18 ~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~~ 86 (400)
T 3vax_A 18 GSHMTYLDAAATT-----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIFT 86 (400)
T ss_dssp ----CCCCCCCCS-----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEEE
T ss_pred cCCcEEecCCCCC-----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEEe
Confidence 5667888877642 56788889888877531 00012111 12345666666665 3567899999
Q ss_pred CCHHHHHHHHHHHhc----CCCC-EEEEcCCCCcchHHHHH---hcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEE
Q 022213 114 LGCKQAVEVILSVLA----RPGA-NVLLPRPGWPYYEGIAQ---RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV 185 (301)
Q Consensus 114 ~g~~~al~~~~~~l~----~~gd-~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 185 (301)
+|+++++..++++++ ++|| +|+++.+.|+++...+. ..|.+++.++++. ++.+|++++++.+++++++++
T Consensus 87 ~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~ 164 (400)
T 3vax_A 87 SGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVS 164 (400)
T ss_dssp SCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEE
T ss_pred CCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEE
Confidence 999999999999998 8999 99999999988755444 3699999998754 556899999999988899999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEE
Q 022213 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265 (301)
Q Consensus 186 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~ 265 (301)
+++|+||||.+++ +++|+++|+++|+++|+|++|+... ....+..+ ..+++.|+||.++.+| +|+++
T Consensus 165 ~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~~ 231 (400)
T 3vax_A 165 LMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGALV 231 (400)
T ss_dssp CCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEEE
T ss_pred EECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEEE
Confidence 9999999999999 7889999999999999999998522 11222222 2388999999876555 66666
Q ss_pred -eeC
Q 022213 266 -TND 268 (301)
Q Consensus 266 -~~~ 268 (301)
+++
T Consensus 232 ~~~~ 235 (400)
T 3vax_A 232 TRRR 235 (400)
T ss_dssp ECBC
T ss_pred Eecc
Confidence 655
No 122
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.91 E-value=7.6e-24 Score=194.07 Aligned_cols=219 Identities=16% Similarity=0.124 Sum_probs=149.6
Q ss_pred CCCCeeeccCCCCCCCCCCCC--hHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRT--AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~--~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
++..+++++.|.+.. .++. ++.+.+++.++++... .|++..+..+++.++++.+.+.++... +++|++|+|++
T Consensus 40 ~g~~~lD~~~~~~~~--~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ 114 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVN--NLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGT 114 (419)
T ss_dssp TSCEEEESSGGGGTT--TTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHH
T ss_pred CCCEEEEccCChhhh--ccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchH
Confidence 467799998887532 1332 6889999999886432 243323334555666666655555332 67999999999
Q ss_pred HHHHHHHHHhcC-CCCEEEEcCCCCcchHHHHH-hcC-------------ceEEEeecCCCC--CCC------------C
Q 022213 118 QAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQ-RKQ-------------VEVRHFDLLPER--NWE------------V 168 (301)
Q Consensus 118 ~al~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~~~--~~~------------~ 168 (301)
++++.+++.+.. +||+|++++|+|+++..... ..| .+++.++.+... .|+ +
T Consensus 115 ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~ 194 (419)
T 2eo5_A 115 EAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNR 194 (419)
T ss_dssp HHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHH
Confidence 999999997754 48999999999986533222 111 245666653211 112 3
Q ss_pred CHHHHH-hhccc----CccEEEEcCCC-CCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC
Q 022213 169 DLDAVE-ALADK----NTAAMVIINPG-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (301)
Q Consensus 169 ~~~~l~-~~~~~----~~~~v~l~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~ 241 (301)
|++.|+ +.+++ +..++++++|+ ||||. ..+.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++..
T Consensus 195 ~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~ 273 (419)
T 2eo5_A 195 VIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTV 273 (419)
T ss_dssp HHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCC
T ss_pred HHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCC
Confidence 578898 87763 23346667775 57896 668889999999999999999999999987665432 222223323
Q ss_pred CCEEEEecCcccCCCCc-ceeEEEEeeC
Q 022213 242 VPVITLGSISKRWLVPG-WRFGWLVTND 268 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G-~rvG~~~~~~ 268 (301)
.+++ ||||.++. | +|+||+++++
T Consensus 274 ~d~~---t~sK~~~~-G~~riG~~~~~~ 297 (419)
T 2eo5_A 274 PDVI---TLAKALGG-GIMPIGATIFRK 297 (419)
T ss_dssp CSEE---EECGGGGT-TTSCCEEEEEEG
T ss_pred CCEE---EecccccC-CccceEEEEEch
Confidence 3444 89999885 9 9999999865
No 123
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.91 E-value=1.5e-23 Score=188.77 Aligned_cols=205 Identities=15% Similarity=0.147 Sum_probs=162.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
+.++++|+.|.|. + ++ +.+++.+.+... .|.+..+..++|+++++++. .+++++++|+++++
T Consensus 5 ~~~~~~l~~~~~~----~--~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~ 66 (374)
T 3uwc_A 5 RVPYSYLERQFAD----I--EP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL 66 (374)
T ss_dssp CBCSCCHHHHTSS----C--HH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred cceeeccccCCCC----c--hH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence 4568899999864 2 33 778888877644 46666788999999999983 23889999999999
Q ss_pred HHHHHHh-cCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCH
Q 022213 121 EVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (301)
Q Consensus 121 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 199 (301)
..+++++ +++||+|+++.|+|.++...++..|.++++++++ .++.+|++.+++.+++++++++ |+||||...+
T Consensus 67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~- 140 (374)
T 3uwc_A 67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD- 140 (374)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence 9999999 8999999999999999999999999999999886 4567899999999987777665 9999999998
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCcccc-cCCCCCCCccccCCCCCEEEEecCc--ccCCCCcceeEEEEeeCCCCcccch
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKS 276 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~~~~-~~~~~~~~~~~~~~~~~vi~~~s~S--K~~~~~G~rvG~~~~~~~~~~~~~~ 276 (301)
+++|.++|+++|+++|+|++|.... +..... ..+. .+++.|+| |.++.+|. .|++++++ +
T Consensus 141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~---~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~ 203 (374)
T 3uwc_A 141 --MPALAKIAKKHNLHIVEDACQTILGRINDKFV---GSWG----QFACFSLHPLKNLNVWSD-AGVIITHS-------D 203 (374)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred --HHHHHHHHHHcCCEEEEeCCCccCceeCCeec---cccc----cEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence 8888899999999999999998643 222111 1111 27778866 99876565 88888754 2
Q ss_pred hHHHHHHhhh
Q 022213 277 GIIDSIKDCL 286 (301)
Q Consensus 277 ~~~~~~~~~~ 286 (301)
++.++++...
T Consensus 204 ~~~~~~~~~~ 213 (374)
T 3uwc_A 204 EYAEKLRLYR 213 (374)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 4666666544
No 124
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.91 E-value=5.3e-24 Score=190.13 Aligned_cols=203 Identities=13% Similarity=0.123 Sum_probs=148.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
.+.+|+|+.+.+ .++++.+.+++.+++.. ....|++.....++++.+++++ + .+++|++|+|+++++
T Consensus 6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~ 72 (356)
T 1v72_A 6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN 72 (356)
T ss_dssp CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence 568999998864 34568888988877532 1234554333455666666655 3 234599999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHH--HHhc--CceEEEeecCCCCCCCCCHHHHHh-hccc-------CccEEEEcC
Q 022213 121 EVILSVLARPGANVLLPRPGWPYYEGI--AQRK--QVEVRHFDLLPERNWEVDLDAVEA-LADK-------NTAAMVIIN 188 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~~~~~l~~-~~~~-------~~~~v~l~~ 188 (301)
..++++++++||+|+++.|+|..+... +... |.+++.++.+ ++.+|++++++ .+++ +++++++++
T Consensus 73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~ 149 (356)
T 1v72_A 73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ 149 (356)
T ss_dssp HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence 999999999999999999998875544 6666 9999888763 35789999999 8875 578889999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCccccc--CCCCCCCccccCCCCCEEEEecCcccCCCCcceeE--EE
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG--WL 264 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~--~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG--~~ 264 (301)
|+| ||.+++.+++++|+++|++||+++|+|++|..+.. .+..+..+. +....++ ++.|+||. ++ ++| |+
T Consensus 150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~d~-~~~s~sK~-g~---~~G~g~~ 222 (356)
T 1v72_A 150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMT-WKAGVDA-LSFGATKN-GV---LAAEAIV 222 (356)
T ss_dssp SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTT-GGGTCCE-EEECCGGG-TC---SSCEEEE
T ss_pred CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhh-hhhcCCE-EEEecccC-CC---cCccEEE
Confidence 987 99999999999999999999999999999986421 122221111 1112233 45699998 44 455 77
Q ss_pred Ee
Q 022213 265 VT 266 (301)
Q Consensus 265 ~~ 266 (301)
++
T Consensus 223 ~~ 224 (356)
T 1v72_A 223 LF 224 (356)
T ss_dssp ES
T ss_pred EE
Confidence 76
No 125
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.91 E-value=1.9e-23 Score=189.64 Aligned_cols=169 Identities=18% Similarity=0.151 Sum_probs=139.4
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhcCceEEEeec
Q 022213 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL 160 (301)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~ 160 (301)
...+|++.+++++. . +++++++++++|+..++++++++||+|+++.|.|.++... ++..|.++++++.
T Consensus 60 ~~~~l~~~la~~~g------~--~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 131 (389)
T 3acz_A 60 TVEQFEEMVCSIEG------A--AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT 131 (389)
T ss_dssp HHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence 45689999999982 2 3677777788999999999999999999999999976554 5778999998876
Q ss_pred CCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC
Q 022213 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (301)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~ 240 (301)
.|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+.. ++. +
T Consensus 132 -------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~----~~~-~-- 194 (389)
T 3acz_A 132 -------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK----PLE-L-- 194 (389)
T ss_dssp -------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GGG-T--
T ss_pred -------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC----ccc-c--
Confidence 4899999999888999999999999999998 8899999999999999999999765421 222 2
Q ss_pred CCCEEEEecCcccCCCCccee-EEEEeeCCCCcccchhHHHHHHhhh
Q 022213 241 IVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 241 ~~~vi~~~s~SK~~~~~G~rv-G~~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
+..+++.|+||.++++|.|+ ||+++++. +++++++...
T Consensus 195 -~~di~~~S~sK~~~~~~~~~~G~v~~~~~-------~~~~~l~~~~ 233 (389)
T 3acz_A 195 -GADIALHSVSKYINGHGDVIGGVSSAKTA-------EDIATIKFYR 233 (389)
T ss_dssp -TCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHH
T ss_pred -CCeEEEECChhhccCCCCceeEEEEECcH-------HHHHHHHHHH
Confidence 23499999999999999998 99998541 3667776654
No 126
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.91 E-value=2.3e-23 Score=188.76 Aligned_cols=203 Identities=16% Similarity=0.189 Sum_probs=159.0
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (301)
++|+|+. |. + |+.+.+++.+.++.. .|.+..+..++|+++++++. .+++++|+|+++|+..
T Consensus 9 ~~i~~~~--p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~ 69 (393)
T 1mdo_A 9 DFLPFSR--PA----M--GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI 69 (393)
T ss_dssp CCBCSCC--CC----C--CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred cccccCC--CC----C--CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence 4677765 32 3 356778888888754 24444578899999999992 2479999999999999
Q ss_pred HHHHh-cCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHH
Q 022213 123 ILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (301)
Q Consensus 123 ~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 201 (301)
+++++ +++||+|+++.|+|.++...++..|.+++.+++++ +++.+|++.+++.+++++++++++ ||||...+
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~--- 142 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD--- 142 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---
Confidence 99999 89999999999999999999999999999999864 346799999999998778877765 48999988
Q ss_pred HHHHHHHHHhCCCeEEEccCCcc-cccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHH
Q 022213 202 LQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (301)
Q Consensus 202 l~~i~~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~ 280 (301)
+++|.++|+++|+++|+|++|+. ..+.+. ++.. ..+++.|+||...++|.|+||++++++ ++++
T Consensus 143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~-----~d~~~~S~~k~K~l~~~~~g~~~~~~~-------~~~~ 207 (393)
T 1mdo_A 143 LDAIYALGERYGIPVIEDAAHATGTSYKGR---HIGA-----RGTAIFSFHAIKNITCAEGGIVVTDNP-------QFAD 207 (393)
T ss_dssp HHHHHHHHHHHTCCBCEECTTCTTCEETTE---ETTS-----SSEEEEECCTTSSSCSSSCEEEEESCH-------HHHH
T ss_pred HHHHHHHHHHcCCeEEEECccccCCeECCe---ecCC-----CCeEEEeCCCCCccccccceEEEeCCH-------HHHH
Confidence 88889999999999999999996 334321 1111 458999999444455669999998542 4777
Q ss_pred HHHhhh
Q 022213 281 SIKDCL 286 (301)
Q Consensus 281 ~~~~~~ 286 (301)
+++...
T Consensus 208 ~l~~~~ 213 (393)
T 1mdo_A 208 KLRSLK 213 (393)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 776543
No 127
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.91 E-value=7.2e-24 Score=194.72 Aligned_cols=242 Identities=12% Similarity=0.068 Sum_probs=156.9
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
.+++.+++|+.|.+.. .+. .++.+.+++.++++.. ..|....+..++++++++++.+..+ .+.++|++|+|++
T Consensus 26 ~~g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ 99 (430)
T 3i4j_A 26 DAGRRYLDGSSGALVA--NIGHGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGS 99 (430)
T ss_dssp TTSCEEEETTHHHHTC--TTCBCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHH
T ss_pred CCCCEEEECCCchhcc--ccCCCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHH
Confidence 3577899999873321 133 3788999999888753 2344444566778888888777654 4567999999999
Q ss_pred HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhcCce---------------EEEeecCCC-CCCCCCHHHH
Q 022213 118 QAVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVE---------------VRHFDLLPE-RNWEVDLDAV 173 (301)
Q Consensus 118 ~al~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~-~~~~~~~~~l 173 (301)
++++.+++.++. ++|.|++.+|+|+++.......+.. +..++.... .....|++.|
T Consensus 100 ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (430)
T 3i4j_A 100 EATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGL 179 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHH
Confidence 999999998873 4789999999999876544443321 222221100 0011255788
Q ss_pred Hhhccc---CccEEEEcCC-CC-Cccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcccc-CCCCCEEE
Q 022213 174 EALADK---NTAAMVIINP-GN-PCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVIT 246 (301)
Q Consensus 174 ~~~~~~---~~~~v~l~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~-~~~~~vi~ 246 (301)
++.+++ +..++++++| +| ++|. ..+.+++++|.++|++||+++|+||+|.++.+.+. ...+..+ +...+++
T Consensus 180 e~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~-~~~~~~~~~~~~di~- 257 (430)
T 3i4j_A 180 RALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS-PLALSRWSGVTPDIA- 257 (430)
T ss_dssp HHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTTCCCSEE-
T ss_pred HHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-hhhhhhhcCCCCcEE-
Confidence 887763 3445556666 56 7887 66788899999999999999999999998876553 2233333 3223344
Q ss_pred EecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHhh-----hcccCCCccccccc
Q 022213 247 LGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQVC 299 (301)
Q Consensus 247 ~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~ 299 (301)
+|||+++. | +|+||++++. ++++.++.. .....+.++++|.+
T Consensus 258 --t~sK~l~~-G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aa 305 (430)
T 3i4j_A 258 --VLGKGLAA-GYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAA 305 (430)
T ss_dssp --EECGGGTT-TSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHH
T ss_pred --EEcccccC-CccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHH
Confidence 68999885 9 9999999843 588888763 22234567777654
No 128
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.91 E-value=8e-24 Score=191.88 Aligned_cols=188 Identities=12% Similarity=0.118 Sum_probs=144.9
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCC-C-CCCHHHHHHHHHHHhhhCCCCCCCC-CEEEcCCHHHHHHHHHHHhcCCCCEE
Q 022213 58 FRTAVEAEDAIVDAVRSGKFNCYAT-N-SGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANV 134 (301)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~Y~~-~-~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~V 134 (301)
.++++.+.+++.+.+. ..|.+ . ....++|+++++++ +.+++ +|++|+|+++++..++++++++||+|
T Consensus 27 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~v 96 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTVL----SNFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRV 96 (396)
T ss_dssp CCCCHHHHHHTTSCCC----CTTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhccccc----cCCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence 3456677776654432 13533 1 23678999999998 34666 79999999999999999999999999
Q ss_pred EEcCCCCcchH--HHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 022213 135 LLPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (301)
Q Consensus 135 l~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~ 211 (301)
++++|+|.++. ..++..|.+++.++++. ++.+|++++++.+++ +++++++++|+||||.+++ +++|+++|++
T Consensus 97 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~ 171 (396)
T 2ch1_A 97 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ 171 (396)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHH
Confidence 99999999884 46788899999998753 456999999999887 7999999999999999999 8889999999
Q ss_pred CCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 212 ~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+|+++|+|++|... ..+..+..++ ..+++.|++|.++. +.++||+++++
T Consensus 172 ~~~~li~Dea~~~g----~~~~~~~~~~---~d~~~~s~~K~~~~-~~g~g~~~~~~ 220 (396)
T 2ch1_A 172 HDCLLIVDAVASLC----GVPFYMDKWE---IDAVYTGAQKVLGA-PPGITPISISP 220 (396)
T ss_dssp TTCEEEEECTTTBT----TBCCCTTTTT---CCEEECCCC-CCCC-CSSCEEEEECH
T ss_pred cCCEEEEEcccccc----CCccchhhcC---cCEEEEcCCccccC-CCCeEEEEECH
Confidence 99999999999832 1222232222 22667899997543 34569998843
No 129
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=4.5e-24 Score=190.31 Aligned_cols=187 Identities=18% Similarity=0.164 Sum_probs=142.0
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEc
Q 022213 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (301)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~ 137 (301)
.++++.+.+++.+.+... ..|....+..++|+++++++ +.+++++++|+|+++++..++++++++||+|+++
T Consensus 10 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 81 (352)
T 1iug_A 10 VRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP 81 (352)
T ss_dssp CCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence 456788888887665421 11111234678999999998 3456899999999999999999999999999999
Q ss_pred CCCCcchH--HHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhC--C
Q 022213 138 RPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL--R 213 (301)
Q Consensus 138 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--~ 213 (301)
.|+|+++. ..++..|.+++.++++. ++.+|++++++ ++++++++++|+||||.+++ +++|.++|+++ |
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 153 (352)
T 1iug_A 82 VYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE 153 (352)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred eCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence 99999864 44566899999998754 34578888776 56889999999999999999 78899999999 9
Q ss_pred CeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 214 ~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+++|+|++|.... ....+..+ +..++++|+||+++.+ .++||+++++
T Consensus 154 ~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~-~g~G~~~~~~ 200 (352)
T 1iug_A 154 GLVGADMVTSLLV----GEVALEAM---GVDAAASGSQKGLMCP-PGLGFVALSP 200 (352)
T ss_dssp CEEEEECTTTBTT----BCCCSGGG---TCSEEEEESSSTTCCC-SCEEEEEECH
T ss_pred CEEEEECCccccC----cceecccc---CeeEEEecCcccccCC-CceeEEEECH
Confidence 9999999997421 11122222 2348899999954433 3489999844
No 130
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.90 E-value=6.2e-24 Score=190.11 Aligned_cols=199 Identities=14% Similarity=0.153 Sum_probs=150.1
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCC-C-CCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT-N-SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~-~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
++++|+.| | ..+++.+.+++.+.+. +.|+. . .+..++|+++++++. ...+++++++|+|+++++
T Consensus 4 ~~~~~~~g-p-----~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~ 69 (366)
T 1m32_A 4 NYLLLTPG-P-----LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAV 69 (366)
T ss_dssp -CEECSSS-S-----CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHH
T ss_pred ccccccCC-C-----cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHH
Confidence 46899988 5 2456778777765321 12321 1 577899999999983 122345799999999999
Q ss_pred HHHHHHhcCCCCEEEEcC-CCCcc-hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--CccEEEEcCCCCCcccC
Q 022213 121 EVILSVLARPGANVLLPR-PGWPY-YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNV 196 (301)
Q Consensus 121 ~~~~~~l~~~gd~Vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~l~~p~nptG~~ 196 (301)
..++++++++||+|++++ ++|.. +...+...|.+++.++++. ++.+|++.+++.+++ +++++++++|+||||.+
T Consensus 70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 147 (366)
T 1m32_A 70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML 147 (366)
T ss_dssp HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence 999999999999988776 55554 5567788899999998753 455899999998875 47888899999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
++ +++|.++|++||+++|+|++|..... ...+..+ +..++++|+||+++. +.++||+++++
T Consensus 148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~~K~~~~-~~g~G~~~~~~ 208 (366)
T 1m32_A 148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAAL---HIDYLISSANKCIQG-VPGFAFVIARE 208 (366)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTT---TCSEEEEESSSTTCC-CSSEEEEEEEH
T ss_pred cC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccccc---CccEEEecCcccccC-CCceEEEEECH
Confidence 99 88999999999999999999985332 1122222 234899999998643 24579999864
No 131
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.90 E-value=6e-24 Score=191.55 Aligned_cols=189 Identities=15% Similarity=0.094 Sum_probs=142.9
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC--CCEEEcCCHHHHHHHHHHHhcCCCCEEE
Q 022213 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA--DDVYVTLGCKQAVEVILSVLARPGANVL 135 (301)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~t~g~~~al~~~~~~l~~~gd~Vl 135 (301)
.++++.+.+++.+.+... ..+.......++++.+++++ +.++ ++|++|+|+++++. ++.+++++||+|+
T Consensus 11 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~la~~~------~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi 81 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVGF--TSKEFVEALAYSLKGLRYVM------GASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL 81 (384)
T ss_dssp SCCCHHHHHHTTCCSCCT--TSHHHHHHHHHHHHHHHHHH------TCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred CCCCHHHHHHhhcccccc--ccHHHHHHHHHHHHHHHHHh------CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence 456677777765544211 01111223456777777777 2344 78999999999999 9999999999999
Q ss_pred EcCCCCcc--hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 022213 136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (301)
Q Consensus 136 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (301)
+++|+|++ +...++..|.+++.++++. ++.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 156 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY 156 (384)
T ss_dssp EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence 99999965 5566678899999998754 446899999999987 7899999999999999999 88899999999
Q ss_pred CCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 213 ~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
|+++|+|++|..... ...+..+ +..+++.|+||+++. +.++||+++++
T Consensus 157 ~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~ 204 (384)
T 3zrp_A 157 VELIVVDGVSSVGAE----EVKAEEW---NVDVYLTASQKALGS-AAGLGLLLLSP 204 (384)
T ss_dssp EEEEEEECTTTTTTS----CCCTTTT---TCSEEEEETTSTTCC-CSSEEEEEECH
T ss_pred CCEEEEECcccccCc----ccccccc---CCCEEEecCcccccC-CCceEEEEECH
Confidence 999999999885332 1122222 234899999998643 24499999843
No 132
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.90 E-value=4.1e-23 Score=187.22 Aligned_cols=208 Identities=18% Similarity=0.226 Sum_probs=155.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
-+++++|+.|.|. + ++.+.+++.+.+... .|. +..+..++|+++++++. .+++++++|+++|
T Consensus 21 ~~~~~~l~~~~p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~a 83 (391)
T 3dr4_A 21 MSDLPRISVAAPR----L--DGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTA 83 (391)
T ss_dssp -------CCCCCC----C--CSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHH
T ss_pred cCCCceeccCCCC----C--CHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHH
Confidence 3578899999864 2 256778888877654 355 55688999999999993 2378999999999
Q ss_pred HHHHHHHh-cCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCC
Q 022213 120 VEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 120 l~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 198 (301)
+..++.++ +++||+|+++.|+|.++...++..|.+++++++++ .++.+|++.+++.+++++++++ |+||||...+
T Consensus 84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~ 159 (391)
T 3dr4_A 84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQICD 159 (391)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC
T ss_pred HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChhh
Confidence 99999999 89999999999999999999999999999999864 3467999999999987777766 6789999988
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccc-cCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchh
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~-~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~ 277 (301)
+++|.++|+++|+++|+|++|+... +.+.. ...+. + +.+.||||..+++|.+.||++++++ +
T Consensus 160 ---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~-d---i~~~S~s~~K~l~~g~gg~~~~~~~-------~ 222 (391)
T 3dr4_A 160 ---MDPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLG-D---CATFSFFGNAIITTGEGGMITTNDD-------D 222 (391)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS-S---EEEEECBTTSSSCCBSCEEEEESCH-------H
T ss_pred ---HHHHHHHHHHcCCEEEEECcccccceECCee---ecccC-C---EEEEECCCCCcCCcCCeEEEEECCH-------H
Confidence 8888999999999999999998633 32221 11121 1 7777877333345567899987542 4
Q ss_pred HHHHHHhhh
Q 022213 278 IIDSIKDCL 286 (301)
Q Consensus 278 ~~~~~~~~~ 286 (301)
+.++++...
T Consensus 223 ~~~~~~~~~ 231 (391)
T 3dr4_A 223 LAAKMRLLR 231 (391)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666554
No 133
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.90 E-value=2.4e-23 Score=191.74 Aligned_cols=238 Identities=13% Similarity=0.041 Sum_probs=161.4
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CCEEEcCCH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGC 116 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~ 116 (301)
.+++.+++|+.|.+... +. .++.+.+++.++++.. ..|....|..++++++++++.+.++. .. +++++|+|+
T Consensus 40 ~~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~gg 113 (439)
T 3dxv_A 40 ENGRELIDLSGAWGAAS--LGYGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSG 113 (439)
T ss_dssp TTSCEEEESSTTTTTCT--TCBSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSH
T ss_pred CCCCEEEECCCchhhcc--CCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCH
Confidence 35778999999976421 33 6788999999988754 34654556778888888888886542 33 699999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhcCce-E--------------EEeecCCCCCCCC-----CHHHHH
Q 022213 117 KQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVE-V--------------RHFDLLPERNWEV-----DLDAVE 174 (301)
Q Consensus 117 ~~al~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----~~~~l~ 174 (301)
+++++.+++.+. .+++.|++.+|+|+++.......+.. . ..++.. ..... |++.|+
T Consensus 114 sea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le 191 (439)
T 3dxv_A 114 SDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLT 191 (439)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHH
Confidence 999999999863 36688999999997654444333221 1 122221 11111 689999
Q ss_pred hhc----ccCccEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEec
Q 022213 175 ALA----DKNTAAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (301)
Q Consensus 175 ~~~----~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s 249 (301)
+.+ .++++++++..++|++|.+.+ .+.+++|.++|++||+++|+||+|.++.+.+. ...+..++...+++ |
T Consensus 192 ~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~-~~~~~~~~~~~di~---s 267 (439)
T 3dxv_A 192 EKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR-LHCFEHEGFVPDIL---V 267 (439)
T ss_dssp HHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS-SSGGGGTTCCCSEE---E
T ss_pred HHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch-hhHHHhcCCCCCEE---E
Confidence 988 345566666666778888665 45599999999999999999999997655443 22333333333444 9
Q ss_pred CcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCcccccc
Q 022213 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQV 298 (301)
Q Consensus 250 ~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 298 (301)
|||.++ +|+|+||++++. ++++.++.... ... .++++|.
T Consensus 268 ~sK~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~ 307 (439)
T 3dxv_A 268 LGKGLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAA 307 (439)
T ss_dssp ECGGGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHH
T ss_pred Ecchhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHH
Confidence 999998 599999999853 46665554322 122 4555544
No 134
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.90 E-value=6e-24 Score=197.12 Aligned_cols=210 Identities=15% Similarity=0.122 Sum_probs=153.8
Q ss_pred CCCeeeccCCCC--CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 41 PRPVVPLGYGDP--TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 41 ~~~~i~l~~g~p--~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
+.++++|..|++ +..+.++. +.+.+++.+.+..... .|.+..+..+||+++++++. .++|++|+|+++
T Consensus 33 g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~~-~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~ 102 (467)
T 1ax4_A 33 GYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGDE-AYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRG 102 (467)
T ss_dssp TSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCCC-CSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHH
T ss_pred CcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhccc-ccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHH
Confidence 556677777654 11122222 4566666666654432 68776788999999999982 368999999999
Q ss_pred HHHHHHHHhcC----CCCE---EEEcCCCCcchHHHHHhcCceEEEeecCC---C-----CCCCCCHHHHHhhccc----
Q 022213 119 AVEVILSVLAR----PGAN---VLLPRPGWPYYEGIAQRKQVEVRHFDLLP---E-----RNWEVDLDAVEALADK---- 179 (301)
Q Consensus 119 al~~~~~~l~~----~gd~---Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~~~~~l~~~~~~---- 179 (301)
|+..++.++++ +||. |+++.+.|..+...+...|.+++.++... . .++.+|++.|++.+++
T Consensus 103 A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~ 182 (467)
T 1ax4_A 103 AENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGAD 182 (467)
T ss_dssp HHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCC
Confidence 99999999998 9998 99887777777778888898888765421 1 1346899999998864
Q ss_pred CccEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCeEEEccCCcc--c--------ccCCCCCCCccccC----CCCCE
Q 022213 180 NTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGH--L--------TFGSIPYTPMGLFG----SIVPV 244 (301)
Q Consensus 180 ~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~--~--------~~~~~~~~~~~~~~----~~~~v 244 (301)
+++++++++|+||| |.+++.+++++|+++|++||+++|+|+++.. . .+.+. ++..+. ...+
T Consensus 183 ~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d- 258 (467)
T 1ax4_A 183 NIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA---TIKEVIFDMYKYAD- 258 (467)
T ss_dssp GEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC---CHHHHHHHHGGGCS-
T ss_pred CeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC---chhhhhhhhccccc-
Confidence 57889999999999 8999999999999999999999999998653 1 12221 111111 1112
Q ss_pred EEEecCcccCCCC-cceeEEEEee
Q 022213 245 ITLGSISKRWLVP-GWRFGWLVTN 267 (301)
Q Consensus 245 i~~~s~SK~~~~~-G~rvG~~~~~ 267 (301)
+++.|+||.++++ | ||++.+
T Consensus 259 ~~~~s~sK~~g~~~G---g~~~~~ 279 (467)
T 1ax4_A 259 ALTMSAKKDPLLNIG---GLVAIR 279 (467)
T ss_dssp EEEEETTSTTCCSSC---EEEEES
T ss_pred eEEEeccccCCCCcc---eEEEeC
Confidence 5668999998776 4 667664
No 135
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.90 E-value=5e-23 Score=189.05 Aligned_cols=223 Identities=16% Similarity=0.143 Sum_probs=150.1
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCC
Q 022213 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKF---NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (301)
+++.+++++.+.+... +. .++.+.+++.++++.... ..|.. ....++++.+++++ + .++++|++|+|
T Consensus 41 ~g~~ylD~~~~~~~~~--lg~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~--~~~~~v~~~~g 111 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAI--HGYNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT----P--QPLECVFLADS 111 (429)
T ss_dssp TSCEEEESSTTTTTCT--TCBSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS----C--TTCCEEEEESS
T ss_pred CCCEEEEcCccHhhcc--CCCCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC----C--CCCCEEEEeCC
Confidence 4677899988875321 32 578899999988864321 12222 11245555555554 3 46789999999
Q ss_pred HHHHHHHHHHHhc---C----CCCEEEEcCCCCcchHHHHHhc-C-------------ceEEEeecCC---CCCC-CCCH
Q 022213 116 CKQAVEVILSVLA---R----PGANVLLPRPGWPYYEGIAQRK-Q-------------VEVRHFDLLP---ERNW-EVDL 170 (301)
Q Consensus 116 ~~~al~~~~~~l~---~----~gd~Vl~~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~~~ 170 (301)
++++++.+++++. + |||+|++.+|+|+++....... + .++..++... ...+ .+|+
T Consensus 112 gtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 191 (429)
T 1s0a_A 112 GSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDM 191 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHH
Confidence 9999999998764 2 6899999999998754322211 1 1244444421 1123 4789
Q ss_pred HHHHhhccc--CccEEEEcCC--CCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEE
Q 022213 171 DAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (301)
Q Consensus 171 ~~l~~~~~~--~~~~v~l~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi 245 (301)
+.+++.+++ ...++++++| +||||. ..+.+++++|+++|++||+++|+||+|.++.+.+.. ..+..++...+++
T Consensus 192 ~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~~ 270 (429)
T 1s0a_A 192 VGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDIL 270 (429)
T ss_dssp HHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE
T ss_pred HHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCEE
Confidence 999998863 2334556666 589996 557888999999999999999999999986554321 1222223233444
Q ss_pred EEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 246 ~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
|+||.++ +| +|+||+++++ ++++.++.
T Consensus 271 ---t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~ 298 (429)
T 1s0a_A 271 ---CLGKALT-GGTMTLSATLTTR--------EVAETISN 298 (429)
T ss_dssp ---EECGGGG-TSSSCCEEEEECH--------HHHHHHHT
T ss_pred ---Eeccccc-CCCccceEEEeCH--------HHHHHhhc
Confidence 7899977 58 9999999843 47777765
No 136
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.90 E-value=2.1e-23 Score=187.75 Aligned_cols=194 Identities=18% Similarity=0.230 Sum_probs=155.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHh-cCCCCEEEEcC
Q 022213 60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPR 138 (301)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~ 138 (301)
.++.+.+++.+.+... .|.+..+..++|+.+++++. .+++++++|+++|+..++.++ +++||+|+++.
T Consensus 14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~ 82 (367)
T 3nyt_A 14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITPG 82 (367)
T ss_dssp HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECC
Confidence 4567888888877654 45555678899999999982 248999999999999999999 89999999999
Q ss_pred CCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 139 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
++|.++...++..|.++++++++++ ++.+|++.+++.+++++++++ |+||||...+ +++|.++|+++|+++|+
T Consensus 83 ~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~ 155 (367)
T 3nyt_A 83 FTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKYGIPVIE 155 (367)
T ss_dssp SSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEE
T ss_pred CccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEEE
Confidence 9999999999999999999998653 367999999999987777766 8899998888 88888899999999999
Q ss_pred ccCCccc-ccCCCCCCCccccCCCCCEEEEecC--cccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhh
Q 022213 219 DEVYGHL-TFGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 219 D~~y~~~-~~~~~~~~~~~~~~~~~~vi~~~s~--SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
|++|+.. .+.+... ..+. .+++.|| +|.++.+|. .|+++.++ +++.++++...
T Consensus 156 D~a~~~g~~~~~~~~---~~~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~ 211 (367)
T 3nyt_A 156 DAAQSFGASYKGKRS---CNLS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIA 211 (367)
T ss_dssp ECTTTTTCEETTEET---TSSS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHT
T ss_pred ECccccCCeECCeec---cCCC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHH
Confidence 9999853 3333222 2222 2788887 899887676 88888754 34777776654
No 137
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.90 E-value=4.8e-23 Score=188.47 Aligned_cols=156 Identities=19% Similarity=0.146 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hcCceEEEeecCC
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDLLP 162 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~ 162 (301)
.+|++.+++++ + .+++++++|+++|+..++++++++||+|+++.|.|.++...+. ..|.++++++..
T Consensus 84 ~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 154 (414)
T 3ndn_A 84 SVFEERLRLIE----G----APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD- 154 (414)
T ss_dssp HHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred HHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-
Confidence 45566666655 2 3678999999999999999999999999999999998766664 489999998762
Q ss_pred CCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCC
Q 022213 163 ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV 242 (301)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~ 242 (301)
|++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .++ .++
T Consensus 155 ------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g--- 217 (414)
T 3ndn_A 155 ------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLG--- 217 (414)
T ss_dssp ------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGT---
T ss_pred ------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcC---
Confidence 889999999989999999999999999998 888999999999999999999854322 112 111
Q ss_pred CEEEEecCcccCCCCc-ceeEEEEeeC
Q 022213 243 PVITLGSISKRWLVPG-WRFGWLVTND 268 (301)
Q Consensus 243 ~vi~~~s~SK~~~~~G-~rvG~~~~~~ 268 (301)
..+++.|+||.++.+| +++||+++++
T Consensus 218 ~div~~S~sK~l~~~G~~~~G~vv~~~ 244 (414)
T 3ndn_A 218 VDVVVYSGTKHIDGQGRVLGGAILGDR 244 (414)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred CCeEeccCCccccCCCCceEEEEEECH
Confidence 2388999999999888 8999999854
No 138
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.90 E-value=4.3e-23 Score=182.93 Aligned_cols=178 Identities=16% Similarity=0.127 Sum_probs=140.6
Q ss_pred HHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEeecCCC
Q 022213 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPE 163 (301)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~ 163 (301)
+|++.+++++. .+ +.++++++++++..++.+++++||+|+++.|+|.++...+ +..|.++..++.
T Consensus 2 ~l~~~la~~~g------~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------AE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHhC------CC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 68999999982 23 4445555589999999999999999999999999876554 458999988875
Q ss_pred CCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHh-CCCeEEEccCCcccccCCCCCCCccccCCCC
Q 022213 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK-LRVMVVADEVYGHLTFGSIPYTPMGLFGSIV 242 (301)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~ 242 (301)
.|++.+++.++++++++++++|+||||.+++ +++|.++|++ +|+++|+|++|....+. .++ . .+
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~---~~ 135 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-D---LG 135 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-G---GT
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-h---cC
Confidence 4788999999888899999999999999998 8999999999 99999999999976542 122 1 23
Q ss_pred CEEEEecCcccCCCCcce-eEEEEeeCCCCcccchhHHHHHHhhhcc--cCCCcccccc
Q 022213 243 PVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLSI--YSDIPTFIQV 298 (301)
Q Consensus 243 ~vi~~~s~SK~~~~~G~r-vG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~ 298 (301)
..+++.|+||.++++|.| +||+++++ ++++++++..... ..+.+++.|.
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAW 187 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHH
Confidence 459999999999999999 79998843 1477777765443 2345555443
No 139
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.90 E-value=4.8e-23 Score=187.24 Aligned_cols=180 Identities=22% Similarity=0.170 Sum_probs=143.3
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEeec
Q 022213 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDL 160 (301)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 160 (301)
...+|++.+++++. .+++++++|+++|++.++.+++++||+|+++.|.|.++...+ +..|.++.+++.
T Consensus 67 ~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 138 (392)
T 3qhx_A 67 TRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVAL 138 (392)
T ss_dssp HHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred HHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCC
Confidence 45678888888872 247999999999999999999999999999999999776655 667999998876
Q ss_pred CCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC
Q 022213 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (301)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~ 240 (301)
.|++.++++++++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|....... ++ .+
T Consensus 139 -------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~----~~-~~-- 201 (392)
T 3qhx_A 139 -------ADLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ----PL-SL-- 201 (392)
T ss_dssp -------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GG-GG--
T ss_pred -------CCHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC----hH-Hh--
Confidence 2899999999989999999999999999998 8899999999999999999998643221 11 11
Q ss_pred CCCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccc
Q 022213 241 IVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQ 297 (301)
Q Consensus 241 ~~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q 297 (301)
+..+++.|+||.++.+| .|+||+++++. ++..+++.... ...+.+++.+
T Consensus 202 -~~di~~~S~sK~lg~~g~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~ 252 (392)
T 3qhx_A 202 -GADVVLHSTTKYIGGHSDVVGGALVTNDE-------ELDQSFAFLQNGAGAVPGPFDA 252 (392)
T ss_dssp -TCSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHH
T ss_pred -CCcEEEEcCccccCCCCCceEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHH
Confidence 22389999999999887 89999998542 46676666543 2334444443
No 140
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.90 E-value=3.4e-23 Score=189.87 Aligned_cols=210 Identities=14% Similarity=0.090 Sum_probs=150.3
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
.+++.+++|+.|.....-.+ .++.+.+++.++++... .+.. .+..++++++++.+.+..+ .++|++|+|+++
T Consensus 54 ~~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~--~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggte 125 (420)
T 2pb2_A 54 QQGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLW--HTSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTE 125 (420)
T ss_dssp TTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCC--CCCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHH
T ss_pred CCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhcc--cccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHH
Confidence 35778999988821100112 56789999999886432 2221 2234566666666666443 579999999999
Q ss_pred HHHHHHHHhcC-------CC-CEEEEcCCCCcchH-HHHHhcCce------------EEEeecCCCCCCCCCHHHHHhhc
Q 022213 119 AVEVILSVLAR-------PG-ANVLLPRPGWPYYE-GIAQRKQVE------------VRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 119 al~~~~~~l~~-------~g-d~Vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
|++.+++++.. +| ++|++++|+|+++. ..+...|.+ +..++. .|++.|++.+
T Consensus 126 A~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i 198 (420)
T 2pb2_A 126 ANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVM 198 (420)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHh
Confidence 99999998875 77 59999999998763 334444433 333332 3899999999
Q ss_pred ccCccEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCC
Q 022213 178 DKNTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV 256 (301)
Q Consensus 178 ~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~ 256 (301)
++++++++++.++|++|. +++.+++++|.++|++||+++|+||+|.++.+.+..+ .+..++...+++ ||||.++
T Consensus 199 ~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~- 273 (420)
T 2pb2_A 199 DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG- 273 (420)
T ss_dssp CTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-
T ss_pred ccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-
Confidence 888888888777888884 6999999999999999999999999998776654322 222222233444 7899988
Q ss_pred CcceeEEEEeeC
Q 022213 257 PGWRFGWLVTND 268 (301)
Q Consensus 257 ~G~rvG~~~~~~ 268 (301)
+|+|+||+++++
T Consensus 274 ~G~~iG~~~~~~ 285 (420)
T 2pb2_A 274 GGFPVSAMLTTQ 285 (420)
T ss_dssp TTSCCEEEEECH
T ss_pred CCCceEEEEEhH
Confidence 899999999853
No 141
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.90 E-value=4.7e-23 Score=188.00 Aligned_cols=185 Identities=15% Similarity=0.127 Sum_probs=142.1
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhcCce
Q 022213 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVE 154 (301)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~ 154 (301)
.|+. .+..+||+.+++++.. + +.|++++| ++|+..+++ ++++||+|+++.|.|.+.... ++..|++
T Consensus 63 r~~~-p~~~~l~~~la~~~g~------~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~ 132 (403)
T 3cog_A 63 RSGN-PTRNCLEKAVAALDGA------K-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLK 132 (403)
T ss_dssp ---C-HHHHHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCE
T ss_pred CCCC-chHHHHHHHHHHHhCC------C-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCE
Confidence 4544 3567999999999832 2 45666655 699999999 889999999999999974443 3567999
Q ss_pred EEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-CeEEEccCCcccccCCCCCC
Q 022213 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR-VMVVADEVYGHLTFGSIPYT 233 (301)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~-~~ii~D~~y~~~~~~~~~~~ 233 (301)
+++++.. |++.+++.++++++++++++|+||||.+++ +++|+++|+++| +++|+|++|..+.+..
T Consensus 133 v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~---- 198 (403)
T 3cog_A 133 ISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR---- 198 (403)
T ss_dssp EEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC----
T ss_pred EEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC----
Confidence 9988762 789999999888999999999999999998 899999999999 9999999999866431
Q ss_pred CccccCCCCCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCcccccc
Q 022213 234 PMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQV 298 (301)
Q Consensus 234 ~~~~~~~~~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 298 (301)
++. + +..++++|+||.++++| .|+||+++++ ++++++++.... ...+.+++.|.
T Consensus 199 ~~~-~---~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~ 254 (403)
T 3cog_A 199 PLA-L---GADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCY 254 (403)
T ss_dssp TTT-T---TCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred ccc-c---CCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHH
Confidence 221 2 34599999999999876 5799999854 247777766543 23345555554
No 142
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.90 E-value=9e-23 Score=185.74 Aligned_cols=159 Identities=23% Similarity=0.244 Sum_probs=131.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEee
Q 022213 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFD 159 (301)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~ 159 (301)
....++++.+++++. . ++.++++++++|+..++.+++++||+|+++.|.|.++...+ ...|.++.+++
T Consensus 65 ~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 136 (398)
T 1gc0_A 65 PTLNLLEARMASLEG------G--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD 136 (398)
T ss_dssp HHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 346678888888872 2 25666666689999999999999999999999999876655 66789988887
Q ss_pred cCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC
Q 022213 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (301)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~ 239 (301)
. .|++.+++.++++++++++++|+||||.+++ +++|+++|+++|+++|+|++|....+.. ++ .+
T Consensus 137 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~~- 200 (398)
T 1gc0_A 137 M-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-EL- 200 (398)
T ss_dssp T-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-GG-
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh-
Confidence 5 3899999999888999999999999999998 8999999999999999999999765531 12 12
Q ss_pred CCCCEEEEecCcccCCCCccee-EEEEeeC
Q 022213 240 SIVPVITLGSISKRWLVPGWRF-GWLVTND 268 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~rv-G~~~~~~ 268 (301)
+..+++.|+||.++++|.|+ ||+++++
T Consensus 201 --~~d~~~~S~sK~~~~~~~~~~G~l~~~~ 228 (398)
T 1gc0_A 201 --GADLVVHSATKYLSGHGDITAGIVVGSQ 228 (398)
T ss_dssp --TCSEEEEETTTTTTCSSSCCCEEEEECH
T ss_pred --CceEEEECCccccCCCCCCeEEEEEECh
Confidence 23489999999999999998 9998743
No 143
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.90 E-value=1.5e-22 Score=185.06 Aligned_cols=183 Identities=21% Similarity=0.208 Sum_probs=145.0
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEE
Q 022213 57 CFRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134 (301)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~V 134 (301)
.++.++.+.+++. .. ..+.|+.. ....++++.+++++. .+++++++|+++|+..++.+++++||+|
T Consensus 31 ~~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~v 98 (412)
T 2cb1_A 31 GFKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEV 98 (412)
T ss_dssp CCSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEE
T ss_pred ecCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEE
Confidence 3666777666553 22 23356643 346788899999882 2489999999999999999999999999
Q ss_pred EEcCCCCcchHHH----HHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 022213 135 LLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210 (301)
Q Consensus 135 l~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~ 210 (301)
+++.|.|.+.... ++..|.++++++. +++++++.++++++++++++|+||||.+++ +++|+++|+
T Consensus 99 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~ 167 (412)
T 2cb1_A 99 VAAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAE 167 (412)
T ss_dssp EEETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred EEeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHH
Confidence 9999999875444 3457889888864 389999999888999999999999999998 899999999
Q ss_pred hCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 211 ~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
++|+++|+|++|..+.+.. .+. . .+..+++.|+||.+++||.|+|++++.+.
T Consensus 168 ~~~~~li~D~~~~~~~~~~---~~~-~---~~~di~~~S~~K~~~~~~~~~G~~~~~~~ 219 (412)
T 2cb1_A 168 EAGVALVVDNTFGAAGALC---RPL-A---WGAHVVVESLTKWASGHGSVLGGAVLSRE 219 (412)
T ss_dssp HHTCEEEEECGGGTTTTSC---CGG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECC
T ss_pred HcCCEEEEECCCccccccC---Ccc-c---cCCeEEEECCcccccCCCCcEEEEEEecc
Confidence 9999999999998752211 111 1 12459999999999999999999988764
No 144
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.90 E-value=2.8e-22 Score=182.21 Aligned_cols=192 Identities=14% Similarity=0.195 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCC--CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHh-cCCCCEEEEcC
Q 022213 62 VEAEDAIVDAVRSGKFNCYATNSG--IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPR 138 (301)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~ 138 (301)
+.+.+++.+.+.. .|.+..| ..++|+++++++. .+++++|+|+++++..+++++ +++||+|+++.
T Consensus 12 ~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~ 79 (394)
T 1o69_A 12 GNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLASS 79 (394)
T ss_dssp CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred HHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECC
Confidence 4577788877764 3555557 8899999999982 268999999999999999999 89999999999
Q ss_pred CCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc---CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 022213 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (301)
Q Consensus 139 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (301)
|+|.++...++..|.+++.++++ .++.+|++.+++.+++ +++++++++ |||...+ +++|.++|+++|++
T Consensus 80 ~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~ 151 (394)
T 1o69_A 80 FTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKENDIV 151 (394)
T ss_dssp SSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCE
T ss_pred CccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCE
Confidence 99999999999999999999885 4567999999998876 688888875 8998877 88888999999999
Q ss_pred EEEccCCc-ccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc
Q 022213 216 VVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS 287 (301)
Q Consensus 216 ii~D~~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (301)
+|+|++|. .+.+.+.... .+. + +.+.|+||..+++|.|+||+++++ ++++++++....
T Consensus 152 li~Dea~~~g~~~~~~~~~---~~~---~-~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~ 210 (394)
T 1o69_A 152 LIEDAAEALGSFYKNKALG---TFG---E-FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYST 210 (394)
T ss_dssp EEEECTTCTTCEETTEETT---SSS---S-EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTB
T ss_pred EEEECcCcccceeCCcccc---ccc---C-cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHH
Confidence 99999999 5555432211 111 1 455566544455678999999854 247777776543
No 145
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.90 E-value=7.7e-23 Score=185.32 Aligned_cols=181 Identities=19% Similarity=0.235 Sum_probs=141.9
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhcCceEEEee
Q 022213 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFD 159 (301)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 159 (301)
.+..++++.+++++. .+ +.|++++| ++++..++++++++||+|+++.|+|.+.... ++..|.++..++
T Consensus 52 ~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 123 (386)
T 1cs1_A 52 PTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD 123 (386)
T ss_dssp HHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred ccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence 356789999999983 23 56666555 9999999999999999999999999974432 366788888887
Q ss_pred cCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC
Q 022213 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (301)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~ 239 (301)
. .|++.+++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+.. ++ .+
T Consensus 124 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~- 187 (386)
T 1cs1_A 124 Q-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----PL-AL- 187 (386)
T ss_dssp T-------TCHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG-
T ss_pred C-------CCHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc-cc-
Confidence 5 2889999999888999999999999999998 8889999999999999999999876531 12 12
Q ss_pred CCCCEEEEecCcccCCCCccee-EEEEeeCCCCcccchhHHHHHHhhhcc-cCCCccccc
Q 022213 240 SIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQ 297 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~rv-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q 297 (301)
+..+++.|+||.++.+|.|+ ||++++++ +++++++..... ..+.+.+.|
T Consensus 188 --~~di~~~s~sK~~~~~~~~~~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~ 238 (386)
T 1cs1_A 188 --GADLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDS 238 (386)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHTCBCCHHHH
T ss_pred --CceEEEEcCcccccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHH
Confidence 34599999999999999997 99998542 466777655432 223444444
No 146
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.89 E-value=1e-22 Score=183.31 Aligned_cols=208 Identities=12% Similarity=0.117 Sum_probs=149.3
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (301)
...+|+.|- .++|+.+.+++.+.+. ..|.+ +..++++++.+++.+.++...+.+.+++|+|++++++.
T Consensus 19 ~~~~~~pgp------~~~~~~v~~a~~~~~~----~~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~ 86 (376)
T 3f0h_A 19 GMLNFTVGP------VMSSEEVRAIGAEQVP----YFRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEA 86 (376)
T ss_dssp SCEECSSSS------CCCCHHHHHHHTSCCC----CCSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHH
T ss_pred CceeecCCC------CCCcHHHHHHhcCCCC----CCCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHH
Confidence 345665552 4567778777755432 12222 23355555555555544533222445669999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcchH--HHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHH
Q 022213 123 ILSVLARPGANVLLPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (301)
Q Consensus 123 ~~~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 200 (301)
++++++++||+|+++.|.|.+.. ..+...|.++..++.+. ++.+|++.+++.++++++++++++|+||||.+++
T Consensus 87 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~-- 162 (376)
T 3f0h_A 87 VVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEH--GKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD-- 162 (376)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCT--TCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC--
T ss_pred HHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHhhccCceEEEEecccCCcceecC--
Confidence 99999999999999998777643 34677899999888753 4669999999988888999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCC-CCcceeEEEEeeCCCCcccchhHH
Q 022213 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIFQKSGII 279 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~-~~G~rvG~~~~~~~~~~~~~~~~~ 279 (301)
+++|+++|++||+++|+|+++..... ...+..++ ..+++.|+||+++ .+| +|++++++ +++
T Consensus 163 -l~~i~~l~~~~~~~li~D~~~~~~~~----~~~~~~~~---~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~ 224 (376)
T 3f0h_A 163 -TMMIGEFCKKNNMFFVCDCVSAFLAD----PFNMNECG---ADVMITGSQKVLACPPG--ISVIVLAP--------RGV 224 (376)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHHT---CSEEEEETTTTTCCCSS--CEEEEECH--------HHH
T ss_pred -HHHHHHHHHHcCCEEEEEcCccccCc----cccccccC---ccEEEecCcccccCCCc--eEEEEECH--------HHH
Confidence 88999999999999999999886432 11222221 2388999999987 566 57777633 466
Q ss_pred HHHHh
Q 022213 280 DSIKD 284 (301)
Q Consensus 280 ~~~~~ 284 (301)
++++.
T Consensus 225 ~~~~~ 229 (376)
T 3f0h_A 225 ERVEK 229 (376)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 66654
No 147
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.89 E-value=1.3e-23 Score=187.15 Aligned_cols=188 Identities=15% Similarity=0.092 Sum_probs=143.6
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEE
Q 022213 58 FRTAVEAEDAIVDAVRSGKFNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLL 136 (301)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~ 136 (301)
.++++.+.+++.+.+.. +.|.. ..+..++|+++++++ +...+++++++|+|+++++..+++++++ |+|++
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 46677888887665542 12321 234678888888887 2233467899999999999999999976 89999
Q ss_pred cCCCCcch--HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 022213 137 PRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR 213 (301)
Q Consensus 137 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~ 213 (301)
+++.|+++ ...++..|.+++.++++. ++.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~ 154 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG 154 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence 99999875 455677899999999854 456899999999887 8899999999999999999 778899999999
Q ss_pred CeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCC-CCcceeEEEEeeC
Q 022213 214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTND 268 (301)
Q Consensus 214 ~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~-~~G~rvG~~~~~~ 268 (301)
+++|+|++|.... .+.++..++ ..+++.|++|+++ .+| +||+++++
T Consensus 155 ~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~g--~G~~~~~~ 201 (353)
T 2yrr_A 155 ALFFLDAVTTLGM----LPFSMRAMG---VDYAFTGSQKCLSAPPG--LAPIAASL 201 (353)
T ss_dssp CEEEEECTTTTTT----SCCCHHHHT---CSEEECCTTSTTCCCSS--CEEEEECH
T ss_pred CeEEEEcCccccc----ccccccccC---ceEEEecCcccccCCCc--eEEEEECH
Confidence 9999999996422 122333332 2388889999644 456 79999854
No 148
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.89 E-value=3.6e-23 Score=188.13 Aligned_cols=167 Identities=19% Similarity=0.146 Sum_probs=134.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCceEEEeec
Q 022213 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL 160 (301)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~ 160 (301)
+..++|+.+|+++. .+ ++++++++++|++.+++ ++++||+|+++.|.|.+... .++..|.+++++++
T Consensus 56 ~~~~lr~~la~~~g------~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 126 (393)
T 1n8p_A 56 NRENLERAVAALEN------AQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTND 126 (393)
T ss_dssp HHHHHHHHHHHHTT------CS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESS
T ss_pred hHHHHHHHHHHHhC------CC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 46789999999982 22 56666666999999999 88999999999999985444 34567889888876
Q ss_pred CCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhC----CCeEEEccCCcccccCCCCCCCcc
Q 022213 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL----RVMVVADEVYGHLTFGSIPYTPMG 236 (301)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~----~~~ii~D~~y~~~~~~~~~~~~~~ 236 (301)
+ | +++++++++++++|++++|+||||.+++ +++|+++|+++ |+++|+|++|..+.+. .+ .
T Consensus 127 ~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~~--~- 190 (393)
T 1n8p_A 127 L-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--NP--L- 190 (393)
T ss_dssp H-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--CG--G-
T ss_pred C-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--CH--H-
Confidence 2 6 8899999888999999999999999998 88889999999 9999999999987653 11 1
Q ss_pred ccCCCCCEEEEecCcccCCCCccee-EEEEeeCCCCcccchhHHHHHHhhh
Q 022213 237 LFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 237 ~~~~~~~vi~~~s~SK~~~~~G~rv-G~~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
.+ +..+++.|+||.++.+|+|+ ||+++++ ++++++++...
T Consensus 191 ~~---~~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~ 231 (393)
T 1n8p_A 191 NF---GADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQ 231 (393)
T ss_dssp GG---TCSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHH
T ss_pred Hc---CCeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHH
Confidence 22 24499999999999999999 9998743 24667766553
No 149
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.89 E-value=1e-22 Score=185.67 Aligned_cols=172 Identities=15% Similarity=0.160 Sum_probs=134.3
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCCEE-EcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHHhcCceEEEeecCC
Q 022213 86 IPPARRAIADYLSRDLPYKLSADDVY-VTLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLP 162 (301)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~-~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~ 162 (301)
..++++.+++++ + .++++++ +++|+++++..++++++++||+|++++|+|++ +...++..|.+++.++++.
T Consensus 46 ~~~l~~~la~~~----g--~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 119 (416)
T 3isl_A 46 MNETMEMLRELF----Q--TKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW 119 (416)
T ss_dssp HHHHHHHHHHHT----T--CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHh----C--CCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC
Confidence 345556666655 3 4556555 88999999999999999999999999999987 6677888999999999864
Q ss_pred CCCCCCCHHHHHhhcc-cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC
Q 022213 163 ERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (301)
Q Consensus 163 ~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~ 241 (301)
. +.+|++++++.++ .+++++++++|+||||.+.+ +++|.++|++||+++|+|++|+.... ...+..+
T Consensus 120 ~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~--- 187 (416)
T 3isl_A 120 G--TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGC----EVKVDEW--- 187 (416)
T ss_dssp T--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTS----CCCTTTT---
T ss_pred C--CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCC----Ccchhhc---
Confidence 3 4589999999997 58999999999999999999 88899999999999999999875221 1122222
Q ss_pred CCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
+..+++.|+||+++ .+.++||+++++ +++++++.
T Consensus 188 ~~d~~~~s~~K~l~-g~~g~g~~~~~~--------~~~~~~~~ 221 (416)
T 3isl_A 188 KIDAAIGGTQKCLS-VPSGMAPITYNE--------RVADVIAA 221 (416)
T ss_dssp TCSEEECCSSSTTC-CCSSEEEEEECH--------HHHHHHHT
T ss_pred CCCEEEecCccccC-CCCCeEEEEECH--------HHHHHhhc
Confidence 23489999999733 334589998743 46666653
No 150
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.89 E-value=8.6e-23 Score=185.83 Aligned_cols=197 Identities=14% Similarity=0.106 Sum_probs=147.1
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCC-EEEcCCHHHHHHHHHHHhcCCCCEE
Q 022213 58 FRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADYLSRDLPYKLSADD-VYVTLGCKQAVEVILSVLARPGANV 134 (301)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~t~g~~~al~~~~~~l~~~gd~V 134 (301)
.++++.+.+++.+.+ ...|.+. ....++++.+++++ + .+.++ +++++|+++++..++.+++++||+|
T Consensus 22 ~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~~v~~~~sgt~al~~~~~~~~~~gd~V 91 (411)
T 3nnk_A 22 INADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVF----R--TENRWTMLVDGTSRAGIEAILVSAIRPGDKV 91 (411)
T ss_dssp CCCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHH----T--CCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHh----C--CCCCcEEEECCCcHHHHHHHHHHhcCCCCEE
Confidence 455677777665432 2223221 12345666666666 2 34444 8889999999999999999999999
Q ss_pred EEcCCCCcc--hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 022213 135 LLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (301)
Q Consensus 135 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~ 211 (301)
+++.|+|++ +...++..|.+++.++++ .++.+|++.+++.+++ +++++++++|+||||.+.+ +++|+++|++
T Consensus 92 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 166 (411)
T 3nnk_A 92 LVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRR 166 (411)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHH
Confidence 999999987 888888999999999974 3456899999999976 8999999999999999999 8889999999
Q ss_pred CCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhh
Q 022213 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC 285 (301)
Q Consensus 212 ~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~ 285 (301)
||+++|+|+++.... ....+..+ +..+++.|+||+++. +.++||+++++ +++++++..
T Consensus 167 ~~~~li~Dea~~~~~----~~~~~~~~---~~d~~~~s~~K~l~~-~~g~g~~~~~~--------~~~~~~~~~ 224 (411)
T 3nnk_A 167 YDALFYTDATASLGG----NPLETDVW---GLDAVSAGMQKCLGG-PSGTSPITLSA--------RMEEAIRRR 224 (411)
T ss_dssp HTCEEEEECTTTBTT----BCCCTTTT---TCSEEECCSTTTTCC-CSSEEEEEECH--------HHHHHHHTT
T ss_pred cCCEEEEECCcccCC----cccchhcc---CCcEEEecCccccCC-CCceEEEEECH--------HHHHHHhhc
Confidence 999999999987522 11122222 234899999998433 34689999843 477777654
No 151
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.89 E-value=2.2e-22 Score=182.65 Aligned_cols=232 Identities=13% Similarity=0.101 Sum_probs=158.5
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
.+++.++||+.|.+.. .++ .++.+.+++.++++... |....+..++++++++++.+..+ .++|++|+|++
T Consensus 33 ~~g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ 103 (395)
T 3nx3_A 33 DKAKKYLDFSSGIGVC--ALGYNHAKFNAKIKAQVDKLL---HTSNLYYNENIAAAAKNLAKASA----LERVFFTNSGT 103 (395)
T ss_dssp TTCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHTTCS---CCCTTSBCHHHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred CCCCEEEECCCcHHhc--cCCCCCHHHHHHHHHHHHhcc---ccccccCCHHHHHHHHHHHHhcC----CCeEEEeCCHH
Confidence 3578899999884321 132 56889999998886432 21122334556666666655433 57999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEEcCCCCcchHHHHHhcC-------------ceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 118 QAVEVILSVLA-------RPGANVLLPRPGWPYYEGIAQRKQ-------------VEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 118 ~al~~~~~~l~-------~~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
+|++.+++.+. .++|+|++.+|+|+++.......+ .++..++. .|++.|++.+
T Consensus 104 ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 176 (395)
T 3nx3_A 104 ESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLV 176 (395)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhc
Confidence 99999998876 357999999999987643333322 23333332 3799999999
Q ss_pred ccCccEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCC
Q 022213 178 DKNTAAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV 256 (301)
Q Consensus 178 ~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~ 256 (301)
+++++++++..++|++|.. .+.+++++|.++|++||+++|+||+|.++.+.+. ......++...+ +.++||.++.
T Consensus 177 ~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~~~~d---~~t~sK~~~~ 252 (395)
T 3nx3_A 177 NEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK-FFAYEHAQILPD---IMTSAKALGC 252 (395)
T ss_dssp CTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGTCCCS---EEEECGGGTT
T ss_pred cCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc-chhHHhcCCCCC---EEEecccccC
Confidence 8777888777777777776 6788899999999999999999999998755443 222222322223 3378999875
Q ss_pred CcceeEEEEeeCCCCcccchhH-HHHHHhhhc-ccCCCccccccc
Q 022213 257 PGWRFGWLVTNDPNGIFQKSGI-IDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 257 ~G~rvG~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
|+|+||+++++ ++ ++.++.... ...+.++++|.+
T Consensus 253 -G~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a 288 (395)
T 3nx3_A 253 -GLSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAG 288 (395)
T ss_dssp -TSCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHH
T ss_pred -CCceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHH
Confidence 99999999843 45 666655432 233455565543
No 152
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.89 E-value=2.3e-22 Score=189.00 Aligned_cols=183 Identities=15% Similarity=0.127 Sum_probs=149.1
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCE--EEcCCHHHHHHHHHHHhcCCC--------CEEEEcCCCCcchHHHH
Q 022213 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDV--YVTLGCKQAVEVILSVLARPG--------ANVLLPRPGWPYYEGIA 148 (301)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i--~~t~g~~~al~~~~~~l~~~g--------d~Vl~~~p~~~~~~~~~ 148 (301)
.|....+..++++++++++.+.+|...+++++ ++|+|+++++..+++++.++| |+|+++.|+|.++...+
T Consensus 130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence 44444456788888888888877765555788 999999999999999998776 99999999999999999
Q ss_pred HhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccC
Q 022213 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG 228 (301)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~ 228 (301)
+..|++++.++++. ++.+|++.|+++++++++++++++|+||||.+.+ +++|.++|++||+++|+|++|..+.+.
T Consensus 210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~ 284 (514)
T 3mad_A 210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP 284 (514)
T ss_dssp HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence 99999999998854 5679999999999988999999999999999999 788999999999999999999987541
Q ss_pred -----CCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 229 -----SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 229 -----~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+....++.. ...+-.+++.|++|. +.+|.++||+++++
T Consensus 285 ~~~~~g~~~~~~~~-~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~ 327 (514)
T 3mad_A 285 WAERLGYPVPPFDF-RLEGVTSVSADTHKY-GYGAKGTSVILYRR 327 (514)
T ss_dssp HHHHTTCCCCCCST-TSTTCCEEEECTTTT-TCCCSSCEEEEESS
T ss_pred hHHhcCCCCCcccc-cCCCCcEEEECchhc-cCCCCCeEEEEEeC
Confidence 111112211 111224888999998 56778999999865
No 153
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.89 E-value=8.9e-23 Score=188.90 Aligned_cols=242 Identities=14% Similarity=0.058 Sum_probs=163.1
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
+++.+|||..|.+.. .+. .++.+.+++.++++.. ..|....+..+.+.++++++.+..+.. ..++|++|+|+++
T Consensus 62 ~G~~ylD~~~~~~~~--~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGse 136 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVT--TVGASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAE 136 (453)
T ss_dssp TSCEEEESSHHHHTC--TTCTTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHH
T ss_pred CCCEEEEcCCCcccC--cCCCCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHH
Confidence 467788888773221 122 4788999999988754 245544566778888888887755421 3579999999999
Q ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCc--------------eEEEeecCC--CCCCCCC--------HHH
Q 022213 119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLP--ERNWEVD--------LDA 172 (301)
Q Consensus 119 al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~~--------~~~ 172 (301)
|++.+++.+.. .+++|++.+++|+++.......+. .+..++... .+.++.+ ++.
T Consensus 137 A~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 216 (453)
T 4ffc_A 137 AVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISR 216 (453)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHH
Confidence 99999987753 458999999999976544433321 344444421 1112233 355
Q ss_pred HHhhcccCccEEEEcCCCCCcc--cCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecC
Q 022213 173 VEALADKNTAAMVIINPGNPCG--NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (301)
Q Consensus 173 l~~~~~~~~~~v~l~~p~nptG--~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~ 250 (301)
|++.+..+..+++++.|+|++| ...+.+.+++|.++|++||+++|+||+|..+.+.+. ......++...+ +.+|
T Consensus 217 l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~-~~a~~~~~~~pd---i~t~ 292 (453)
T 4ffc_A 217 IETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA-WFASEHEGIVPD---IVTM 292 (453)
T ss_dssp HHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHTCCCS---EEEE
T ss_pred HHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc-cchhhhcCCCcc---hHhh
Confidence 6666655667788889988877 455778899999999999999999999998765543 222222222223 3478
Q ss_pred cccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 251 SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
||.++. |+|+||++++. ++++.++.... ...+.++++|.+
T Consensus 293 sK~~~~-G~~~G~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aa 333 (453)
T 4ffc_A 293 AKGIAG-GMPLSAVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAA 333 (453)
T ss_dssp CGGGGT-TSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHH
T ss_pred hhhhcC-CcCeEEEEECH--------HHHhhhcccCcCCCCCcCHHHHHH
Confidence 999876 99999998843 46666654432 234566676654
No 154
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.89 E-value=2.8e-22 Score=185.39 Aligned_cols=224 Identities=11% Similarity=0.037 Sum_probs=151.6
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
.+++.+|||..|.+.. +--..++.+.+++.++++.... ....+..+.+.++++++.+..+ .+.+ |++|+|+++
T Consensus 46 ~~g~~~lD~~~~~~~~-~lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggse 118 (452)
T 3n5m_A 46 IQGKRYLDGMSGLWCV-NSGYGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSE 118 (452)
T ss_dssp TTCCEEEETTHHHHTC-TTCBCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHH
T ss_pred CCCCEEEECCcchhhc-cCCCCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHH
Confidence 4578899999883221 1122468899999998874321 2223445666666666666443 2344 999999999
Q ss_pred HHHHHHHHhc-----C---CCCEEEEcCCCCcchHHHHHhcCce-------------EEEeecCCCCCCCC-C-------
Q 022213 119 AVEVILSVLA-----R---PGANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEV-D------- 169 (301)
Q Consensus 119 al~~~~~~l~-----~---~gd~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-~------- 169 (301)
|++.+++.++ . ++|+|++.+|+|+++.......+.. ...++......+.. |
T Consensus 119 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (452)
T 3n5m_A 119 ANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV 198 (452)
T ss_dssp HHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence 9999999987 5 7899999999999875444443321 22333211111111 1
Q ss_pred --HHHHHhhcc----cCccEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC
Q 022213 170 --LDAVEALAD----KNTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (301)
Q Consensus 170 --~~~l~~~~~----~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~ 241 (301)
++.|++.++ ++++++++..+ +| ||.++ +.+++++|.++|++||+++|+||+|..+.+.+.. .....++..
T Consensus 199 ~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~~~~~~~~~ 276 (452)
T 3n5m_A 199 ECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKA-FGFMNYDVK 276 (452)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccccc-chhhhcCCC
Confidence 788998886 34555666666 79 99766 8888999999999999999999999987665532 223333323
Q ss_pred CCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHH
Q 022213 242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIK 283 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~ 283 (301)
.+++ +|||.++. | +|+||++++. ++++.++
T Consensus 277 ~di~---t~sK~l~~-G~~~ig~~~~~~--------~i~~~~~ 307 (452)
T 3n5m_A 277 PDII---TMAKGITS-AYLPLSATAVKR--------EIYEAFK 307 (452)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEEEH--------HHHGGGC
T ss_pred CCEE---eecccccC-CCcceEEEEECH--------HHHHHHh
Confidence 3333 78999876 9 9999999843 4666664
No 155
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.89 E-value=1.2e-22 Score=186.65 Aligned_cols=240 Identities=14% Similarity=0.084 Sum_probs=156.0
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
+++.+++|..|.+.. .+. .++.+.+++.++++.... +. ..+..+++.++++.+.+.++ .+.++|++|+|+++
T Consensus 41 ~g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~e 113 (433)
T 1zod_A 41 DGRAILDFTSGQMSA--VLGHCHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANITP--PGLDRALLLSTGAE 113 (433)
T ss_dssp TCCEEEETTHHHHTC--TTCBTCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHH
T ss_pred CCCEEEEcccchhcc--ccCCCCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence 467788997775421 122 467899999988874321 11 12334556666666655544 35689999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhc------------CceEEEeecCC--CCCCC--------CCHHHHH
Q 022213 119 AVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRK------------QVEVRHFDLLP--ERNWE--------VDLDAVE 174 (301)
Q Consensus 119 al~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~------------g~~~~~~~~~~--~~~~~--------~~~~~l~ 174 (301)
|++.+++.+. ..+|+|++.+|+|+++....... ...+..++... ...+. +|++.|+
T Consensus 114 a~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le 193 (433)
T 1zod_A 114 SNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAF 193 (433)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHH
Confidence 9999998764 24589999999998754332211 01233333311 11121 3588999
Q ss_pred hhccc---CccEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEec
Q 022213 175 ALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (301)
Q Consensus 175 ~~~~~---~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s 249 (301)
+.+++ +..++++++| +||||. ..+.+++++|.++|++||+++|+||+|.++.+.+. ...+..++...++ .|
T Consensus 194 ~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~-~~~~~~~~~~~di---~s 269 (433)
T 1zod_A 194 DLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT-MFACQRDGVTPDI---LT 269 (433)
T ss_dssp HHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHTCCCSE---EE
T ss_pred HHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch-HhHHhhcCCCCCE---EE
Confidence 88863 2344556677 588996 57889999999999999999999999998765443 2222222222233 38
Q ss_pred CcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc---ccCCCccccccc
Q 022213 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQVC 299 (301)
Q Consensus 250 ~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~ 299 (301)
+||.++. |+|+||+++++ ++++.++.... ...+.++++|.+
T Consensus 270 ~sK~~~~-G~~ig~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a 313 (433)
T 1zod_A 270 LSKTLGA-GLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAV 313 (433)
T ss_dssp ECHHHHT-TSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHH
T ss_pred ecccccC-CCCeeEEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHH
Confidence 9999986 99999999853 47777765221 223456666643
No 156
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.88 E-value=5.6e-22 Score=185.49 Aligned_cols=204 Identities=14% Similarity=0.114 Sum_probs=161.3
Q ss_pred CChHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcC-----C
Q 022213 59 RTAVEAEDAIVDAVRSG---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-----P 130 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-----~ 130 (301)
..++.+.+++.+++... ....|....|..++++++++++.+.+|...+++++++|+|+++++..+++++++ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 44567778777777642 223455555677899999999988888666678999999999999999999865 5
Q ss_pred C---CEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHH
Q 022213 131 G---ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207 (301)
Q Consensus 131 g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~ 207 (301)
| |+|+++.++|..+...++..|++++.++++. +++.+|++.|+++++++++++++++|+||||.+.+ +++|.+
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence 6 8999999999999999999999999999854 35679999999999988999999999999999998 888899
Q ss_pred HHHhCCCeEEEccCCcccccC-----CCC-CCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 208 MARKLRVMVVADEVYGHLTFG-----SIP-YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 208 ~~~~~~~~ii~D~~y~~~~~~-----~~~-~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+|+++|+++|+|++|..+... +.. .+++. +...+-.+++.|++|. +.+|.++||+++++
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~ 295 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FRVPGVTSISCDTHKY-GFAPKGSSVIMYRN 295 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TTSTTCCEEEEETTTT-TCCCSSCEEEECSS
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-ccCCCCcEEEECchhh-cCCCCCceeEEecC
Confidence 999999999999999864321 100 10111 1111223788899998 56788999999855
No 157
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.88 E-value=8.4e-23 Score=184.22 Aligned_cols=202 Identities=11% Similarity=0.036 Sum_probs=147.4
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
++.+.|+.|- .++++.+.+++.+... ..|.+. ....++++++++++.... ++++++|++|+|++++
T Consensus 4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~~~g~t~a 71 (385)
T 2bkw_A 4 SVDTLLIPGP------IILSGAVQKALDVPSL----GHTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVLAGSGTLG 71 (385)
T ss_dssp CCCEECSSSS------CCCCHHHHHTTSCCCC----CTTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEEESCTTHH
T ss_pred ccceeecCCC------cCchHHHHHHHhcccc----ccCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEEcCchHHH
Confidence 4556776663 3445666666544332 122221 134567888888886532 2456899999999999
Q ss_pred HHHHHHHhc---CCCCEEEEc-CCCCcch-HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCc
Q 022213 120 VEVILSVLA---RPGANVLLP-RPGWPYY-EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPC 193 (301)
Q Consensus 120 l~~~~~~l~---~~gd~Vl~~-~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~npt 193 (301)
+..+++++. ++||+|+++ .+.|..+ ...++..|.+++.+++. +.++.+|++.+++.+++ +++++++++|+|||
T Consensus 72 l~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 150 (385)
T 2bkw_A 72 WDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTST 150 (385)
T ss_dssp HHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred HHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence 999999998 899999888 5566655 36677889999999872 23456899999999876 78999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhC--CCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCC-CCcceeEEEEeeC
Q 022213 194 GNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTND 268 (301)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~--~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~-~~G~rvG~~~~~~ 268 (301)
|.+++ +++|+++|+++ |+++|+|++|.... .+..+..+ +..+++.|+||+++ .+| +||+++++
T Consensus 151 G~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~~G--~G~~~~~~ 216 (385)
T 2bkw_A 151 AVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDEW---GVDFALTASQKAIGAPAG--LSISLCSS 216 (385)
T ss_dssp TEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTTT---TCSEEEEESSSTTCCCSC--EEEEEECH
T ss_pred CeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----cccccccc---CceEEEecCccccccCCc--ceEEEEcH
Confidence 99999 78899999999 99999999997422 11223222 23488999999754 466 59999854
No 158
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.88 E-value=8.8e-23 Score=187.67 Aligned_cols=237 Identities=13% Similarity=0.059 Sum_probs=152.3
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
.+++.++|+..|.... .++ .++.+.+++.+++.......|+. ....+|++.+++++ + +.++|++|+|++
T Consensus 52 ~~g~~ylD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~---~~~~v~~~~sGs 121 (434)
T 3l44_A 52 VDGNKYIDYLAAYGPI--ITGHAHPHITKAITTAAENGVLYGTPT-ALEVKFAKMLKEAM----P---ALDKVRFVNSGT 121 (434)
T ss_dssp TTCCEEEECCGGGTTC--SSCBTCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHC----T---TCSEEEEESSHH
T ss_pred CCCCEEEECCCchhcc--ccCCCCHHHHHHHHHHHHhCcCCCCCC-HHHHHHHHHHHHhC----C---CCCEEEEeCchH
Confidence 3578899998885421 133 57889999999887543323433 33456666666664 2 578999999999
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCc-eEEEeecCCCCCC------------CCCHHHHHhhccc--C
Q 022213 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV-EVRHFDLLPERNW------------EVDLDAVEALADK--N 180 (301)
Q Consensus 118 ~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~------------~~~~~~l~~~~~~--~ 180 (301)
++++.+++.+.. ++++|++.+|+|+++.......+. ...........+. ..|++.+++++++ .
T Consensus 122 ea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 201 (434)
T 3l44_A 122 EAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGH 201 (434)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCC
Confidence 999999998865 779999999999876543333221 1111111000110 0178999988863 2
Q ss_pred ccEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCc
Q 022213 181 TAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (301)
Q Consensus 181 ~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G 258 (301)
..++++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+. ...+..++...+ +.+|||.++ +|
T Consensus 202 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~-~~~~~~~~~~~d---i~t~sK~~~-~G 275 (434)
T 3l44_A 202 EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY-GGAQDLLGVTPD---LTALGKVIG-GG 275 (434)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS-SCHHHHHTCCCS---EEEEEGGGG-TT
T ss_pred CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc-cHHHHHcCCCCC---eeehhhhhc-CC
Confidence 344555666 45556555 8889999999999999999999999987 4432 222222222223 348899987 89
Q ss_pred ceeEEEEeeCCCCcccchhHHHHHHhh----hcccCCCccccccc
Q 022213 259 WRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQVC 299 (301)
Q Consensus 259 ~rvG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~ 299 (301)
+|+||++++. ++++.+... .....+.++++|.+
T Consensus 276 ~~iG~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aa 312 (434)
T 3l44_A 276 LPIGAYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMAS 312 (434)
T ss_dssp SSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHH
T ss_pred cCeeeEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHH
Confidence 9999998743 466666542 11123455555543
No 159
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.88 E-value=8.6e-22 Score=177.08 Aligned_cols=194 Identities=13% Similarity=0.137 Sum_probs=152.0
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHh---cCCCCEEE
Q 022213 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL---ARPGANVL 135 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l---~~~gd~Vl 135 (301)
++++.+.+++.+.+... .|.+.....++|+.+++++. . +++++|+|+++|+..+++++ +++||+|+
T Consensus 10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl 78 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFSADRNEII 78 (375)
T ss_dssp CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence 34678899999888643 23444467899999999982 2 38999999999999999999 88999999
Q ss_pred EcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 022213 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (301)
Q Consensus 136 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (301)
++.|+|.++...+...|.+++.++++++. .+|++.+++.++++++++++++| ||.+.+ +++|.++|+++|++
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~ 150 (375)
T 2fnu_A 79 TTPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLS 150 (375)
T ss_dssp ECSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred ECCCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence 99999999999999999999999886532 58999999999888888887776 999998 78889999999999
Q ss_pred EEEccCCcccccCCCCCCCccccCCCCCEEEEecCc--ccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhh
Q 022213 216 VVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 216 ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~S--K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
+|+|++|....... ...+..+. .+.+.|+| |.++. | +|++++.+. ++++++++...
T Consensus 151 li~D~a~~~~~~~~--~~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~~ 208 (375)
T 2fnu_A 151 FLSDSSHALGSEYQ--NKKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLFR 208 (375)
T ss_dssp EEEECTTCTTCEET--TEETTSSS----SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHHT
T ss_pred EEEECccccCCeEC--CeeccccC----CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHHH
Confidence 99999998654321 11122221 27788888 99755 6 788887532 24667666543
No 160
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.88 E-value=5.5e-22 Score=177.28 Aligned_cols=209 Identities=11% Similarity=0.050 Sum_probs=147.9
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (301)
++++|+-|- .++|+.+.+++.+.+.+.....+.......++.+.+.+.+.+.++.. ++++|++|+|+++++..
T Consensus 4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~ 76 (362)
T 3ffr_A 4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER 76 (362)
T ss_dssp CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence 456776552 34566788888777765431111111223355555555555555532 56789999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCc-chHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHH
Q 022213 123 ILSVLARPGANVLLPRPGWP-YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (301)
Q Consensus 123 ~~~~l~~~gd~Vl~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 201 (301)
+++++.++ +.+++..+.|. .+...++..|.+++.++.+ .++.+|+++++ ++++++++++++|+||||.+++
T Consensus 77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~--- 148 (362)
T 3ffr_A 77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP--- 148 (362)
T ss_dssp HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence 99999988 55556666665 2345677889999999874 34568999998 6778999999999999999999
Q ss_pred HHHHHHHHHhC-CCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCC-CCcceeEEEEeeCCCCcccchhHH
Q 022213 202 LQEIAEMARKL-RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIFQKSGII 279 (301)
Q Consensus 202 l~~i~~~~~~~-~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~-~~G~rvG~~~~~~~~~~~~~~~~~ 279 (301)
+++|+++|++| |+++|+|++|...... ..+.. ..+++.|+||+++ .+| +|++++++ +++
T Consensus 149 l~~i~~la~~~p~~~li~D~a~~~~~~~----~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~~--------~~~ 209 (362)
T 3ffr_A 149 VEDINTFRDKNKDALIFVDAVSSLPYPK----FDWTK-----IDSVFFSVQKCFGLPAG--LGVWILND--------RVI 209 (362)
T ss_dssp HHHHTTSGGGSTTSEEEEECTTTTTSSC----CCTTS-----CSEEEEETTSTTCCCSC--CEEEEEEH--------HHH
T ss_pred HHHHHHHHHhCCCCEEEEecccccCCcc----cChhH-----CcEEEEecccccCCCCc--eEEEEECH--------HHH
Confidence 88888999999 9999999999864321 11111 2288899999988 677 46676643 466
Q ss_pred HHHHhh
Q 022213 280 DSIKDC 285 (301)
Q Consensus 280 ~~~~~~ 285 (301)
++++..
T Consensus 210 ~~~~~~ 215 (362)
T 3ffr_A 210 EKSKAL 215 (362)
T ss_dssp HHHHHH
T ss_pred HHhhhc
Confidence 666554
No 161
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.88 E-value=4.3e-22 Score=179.37 Aligned_cols=206 Identities=17% Similarity=0.159 Sum_probs=157.6
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (301)
++++++.+.| ..++.+.+++.+.+... .|.+..+..++|+.+++++. .+++++++|+++|+..
T Consensus 4 ~~~~l~~~~~------~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~ 66 (373)
T 3frk_A 4 SFASFKPMHD------EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHL 66 (373)
T ss_dssp CSCCCHHHHH------HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHH
T ss_pred cccCCCcccC------CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHH
Confidence 3455555542 23567788888877654 36666678999999999983 2489999999999999
Q ss_pred HHHHh-cCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHH
Q 022213 123 ILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (301)
Q Consensus 123 ~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~ 201 (301)
++.++ +++||+|+++.++|.++...++..|.+++++++++ +++.+|++.+++.+++++++++ |+||||...+
T Consensus 67 ~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~--- 139 (373)
T 3frk_A 67 ILKGYDIGFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD--- 139 (373)
T ss_dssp HHHHTTCCTTCEEEEETTSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---
T ss_pred HHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---
Confidence 99999 89999999999999999999999999999998864 3467899999999988777776 7889999988
Q ss_pred HHHHHHHHHhCCCeEEEccCCcccc-cCCCCCCCccccCCCCCEEEEecCc--ccCCCCcceeEEEEeeCCCCcccchhH
Q 022213 202 LQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (301)
Q Consensus 202 l~~i~~~~~~~~~~ii~D~~y~~~~-~~~~~~~~~~~~~~~~~vi~~~s~S--K~~~~~G~rvG~~~~~~~~~~~~~~~~ 278 (301)
+++|.++|+++|+++|+|++|+... +++.. ...+. -+.+.||| |.++.+|. .|++++++ +++
T Consensus 140 l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~----d~~~~S~~~~K~l~~~g~-gg~~~~~~-------~~~ 204 (373)
T 3frk_A 140 MDEIKRIAKKYNLKLIEDAAQAHGSLYKGMK---VGSLG----DAAGFSFYPAKNLGSLGD-GGAVVTND-------KDL 204 (373)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSSS-CEEEEESC-------HHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccCCEECCEe---ccccc----cEEEEeCcCCCccCccce-eEEEEeCC-------HHH
Confidence 7888889999999999999998633 22221 11111 17788877 88654353 78888754 246
Q ss_pred HHHHHhhhc
Q 022213 279 IDSIKDCLS 287 (301)
Q Consensus 279 ~~~~~~~~~ 287 (301)
.++++....
T Consensus 205 ~~~~~~~~~ 213 (373)
T 3frk_A 205 AEKIKALSN 213 (373)
T ss_dssp HHHHHHHHB
T ss_pred HHHHHHHHh
Confidence 666665543
No 162
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.88 E-value=8.9e-23 Score=185.63 Aligned_cols=212 Identities=16% Similarity=0.152 Sum_probs=150.5
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCC---CCHH--HHH-----HHHHHHhhhCCCCCCCCCEE
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNS---GIPP--ARR-----AIADYLSRDLPYKLSADDVY 111 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~~~--lr~-----~ia~~l~~~~~~~~~~~~i~ 111 (301)
.++|+|..|.+. + ++.+.+++.+.+.+.....|+... |.+. +++ .+++++ + .++++|+
T Consensus 23 ~~~i~~~~~~~~----~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~----g--~~~~~i~ 90 (407)
T 2dkj_A 23 REGLELIASENF----V--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALF----G--AAWANVQ 90 (407)
T ss_dssp HTSEECCTTCCC----C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEECC
T ss_pred hcceeeccCCCC----C--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHh----C--CCcceEE
Confidence 578999999742 3 688999998887642233465432 4443 344 455555 3 3455566
Q ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch---HHHHHhcCc--eEEEeecCCCCCCCCCHHHHHhhccc-CccEEE
Q 022213 112 VTLGCKQAVEVILSVLARPGANVLLPRPGWPYY---EGIAQRKQV--EVRHFDLLPERNWEVDLDAVEALADK-NTAAMV 185 (301)
Q Consensus 112 ~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~---~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 185 (301)
+++| ++++..++++++++||+|+++.|+|..+ ...++..|. ..+.++++ .+++.+|++.+++.+++ ++++++
T Consensus 91 ~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~v~ 168 (407)
T 2dkj_A 91 PHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVR-PDTELIDLEEVRRLALEHRPKVIV 168 (407)
T ss_dssp CSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCC-TTTSSCCHHHHHHHHHHHCCSEEE
T ss_pred ecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCC-cccCccCHHHHHHHHhhcCCeEEE
Confidence 6666 5699999999999999999999999887 344445555 34444332 23567999999999874 789999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcc-cccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEE
Q 022213 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (301)
Q Consensus 186 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~ 264 (301)
+++|+|| ...+ +++|.++|++||+++|+|++|.. +.+.+.....+. ...++++|+||. ++|.|+||+
T Consensus 169 ~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~--l~g~~~G~~ 236 (407)
T 2dkj_A 169 AGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-----YAHVVTSTTHKT--LRGPRGGLI 236 (407)
T ss_dssp ECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-----TCSEEEEESSGG--GCCCSCEEE
T ss_pred EeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCccc-----cccEEEEecccc--CCCCCceEE
Confidence 8999998 5666 88999999999999999999997 554443222111 135889999996 468899999
Q ss_pred EeeCCCCcccchhHHHHHHhhh
Q 022213 265 VTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
++++ ++++++++...
T Consensus 237 ~~~~-------~~~~~~l~~~~ 251 (407)
T 2dkj_A 237 LSND-------PELGKRIDKLI 251 (407)
T ss_dssp EESC-------HHHHHHHHHHH
T ss_pred EECC-------HHHHHHHHhhh
Confidence 9853 24777776654
No 163
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.88 E-value=8.3e-22 Score=179.62 Aligned_cols=195 Identities=18% Similarity=0.196 Sum_probs=148.9
Q ss_pred HHHHHHHHHHhc------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEE---cCCHHHHHHHHHHHhcCCCCE
Q 022213 63 EAEDAIVDAVRS------GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGAN 133 (301)
Q Consensus 63 ~~~~~~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd~ 133 (301)
.+.+++.+.... ...+.|+.. |...|++.+|+++. .+..++ ++|+++|+..++.+++++||+
T Consensus 33 ~vl~a~~~~~~~~~~~~~~~~~~y~~~-~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~GD~ 103 (409)
T 3jzl_A 33 KVLDAFQENKVSDFHFHPSTGYGYDDE-GRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPDDE 103 (409)
T ss_dssp HHHHHHHHTTCCGGGGCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHhhhhhhccCCCcCCCCChh-HHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCCCE
Confidence 455666654311 123345553 56789999999882 344555 899999999999999999999
Q ss_pred EEEcC-CCCcchHH----------HHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcC----CCCCcccCCC
Q 022213 134 VLLPR-PGWPYYEG----------IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN----PGNPCGNVFT 198 (301)
Q Consensus 134 Vl~~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~----p~nptG~~~~ 198 (301)
|+++. |.|..+.. .++..|+++++++++. ++.+|++.++++++++++++++++ |+||||.+.+
T Consensus 104 Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~ 181 (409)
T 3jzl_A 104 LLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEK 181 (409)
T ss_dssp EEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHH
T ss_pred EEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcccc
Confidence 99998 99998874 3456789999888754 456999999999998899999999 9999998755
Q ss_pred HHHHHHHHHHHHh--CCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccc
Q 022213 199 YHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQK 275 (301)
Q Consensus 199 ~~~l~~i~~~~~~--~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~ 275 (301)
+++|+++|++ +|+++++|++|..+.+... +.. ++ ..++++|+||.++.+| .+.||++++
T Consensus 182 ---l~~I~~la~~~~~~~~livD~a~~~~~~~~~-p~~---~g---~Div~~S~sK~lgg~~~~~GG~v~~~-------- 243 (409)
T 3jzl_A 182 ---IKEMIVFVKNINPEVIVFVDNCYGEFVEYQE-PPE---VG---ADIIAGSLIKNPGGGLAKTGGYIAGK-------- 243 (409)
T ss_dssp ---HHHHHHHHHHHCTTCEEEEECTTCTTTSSCC-SGG---GT---CSEEEEETTSGGGTTTCSSCEEEEEC--------
T ss_pred ---HHHHHHHHHhhCCCCEEEEeCCcccccccCC-ccc---cC---CeEEEECccccCCccCCceEEEEEeC--------
Confidence 8999999999 9999999999998664321 111 11 2389999999988776 446888874
Q ss_pred hhHHHHHHhhh
Q 022213 276 SGIIDSIKDCL 286 (301)
Q Consensus 276 ~~~~~~~~~~~ 286 (301)
++++++++...
T Consensus 244 ~~li~~l~~~~ 254 (409)
T 3jzl_A 244 EALVDLCGYRL 254 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 35888887743
No 164
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.88 E-value=1.6e-21 Score=178.25 Aligned_cols=157 Identities=15% Similarity=0.169 Sum_probs=129.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEeecC
Q 022213 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLL 161 (301)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 161 (301)
..++++.+|+++. .+++++++|+++|+..++.+++++||+|+++.+.|.+....+ +..|+++.+++.
T Consensus 84 ~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~- 154 (415)
T 2fq6_A 84 HFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP- 154 (415)
T ss_dssp HHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT-
T ss_pred HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC-
Confidence 4679999999882 246778889999999999999999999999999999766443 457899988865
Q ss_pred CCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHh--CCCeEEEccCCcccccCCCCCCCccccC
Q 022213 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (301)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~--~~~~ii~D~~y~~~~~~~~~~~~~~~~~ 239 (301)
.|++++++++++++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|+...+. .++. ++
T Consensus 155 ------~d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~~-~g 220 (415)
T 2fq6_A 155 ------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KALD-FG 220 (415)
T ss_dssp ------TCGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGGG-GT
T ss_pred ------CCHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Cccc-cC
Confidence 2789999999888999999999999999999 8899999999 99999999999864322 1221 22
Q ss_pred CCCCEEEEecCcccCCCCcce-eEEEEeeC
Q 022213 240 SIVPVITLGSISKRWLVPGWR-FGWLVTND 268 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~r-vG~~~~~~ 268 (301)
..+++.|+||.++.+|.+ +||+++++
T Consensus 221 ---~Div~~S~sK~lg~~g~~~~G~l~~~~ 247 (415)
T 2fq6_A 221 ---IDVSIQAATKYLVGHSDAMIGTAVCNA 247 (415)
T ss_dssp ---CSEEEEETTTTTTCSSSCCCEEEEECT
T ss_pred ---CeEEEEeCccccCCCCCceEEEEEeCH
Confidence 238999999999998865 58888744
No 165
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.88 E-value=1.6e-22 Score=182.74 Aligned_cols=197 Identities=16% Similarity=0.056 Sum_probs=144.4
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEE
Q 022213 58 FRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL 135 (301)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl 135 (301)
.++++.+.+++.+.+. ..|.+ .....++++.+++++ +.. .+++|++|+|+++++..++++++++||+|+
T Consensus 32 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~gg~~al~~~~~~~~~~gd~vl 102 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRMI----GHMQKEMLQIMEEIKQGIQYVF----QTR-NPLTLVVSGSGHCAMETALFNLLEPGDSFL 102 (393)
T ss_dssp CCCCHHHHHHTTCCCC----CTTSHHHHHHHHHHHHHHHHHH----TCC-CSEEEEESCCTTTHHHHHHHHHCCTTCEEE
T ss_pred CCCCHHHHHHhccccc----CcccHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEeCCcHHHHHHHHHhcCCCCCEEE
Confidence 4566777776654321 12222 122346667777766 211 233699999999999999999999999999
Q ss_pred EcCCCCcc--hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 022213 136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (301)
Q Consensus 136 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (301)
++.++|.+ +...++..|.+++.++++.. +.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|++|
T Consensus 103 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 177 (393)
T 3kgw_A 103 TGTNGIWGMRAAEIADRIGARVHQMIKKPG--EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRY 177 (393)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred EEeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHc
Confidence 99988863 35677889999999988543 35899999999987 8999999999999999999 88899999999
Q ss_pred CCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 213 ~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
|+++|+|++|.... ....+..+ +..+++.|+||+++. +.++||+++++ +++++++.
T Consensus 178 ~~~li~De~~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~-~~g~g~~~~~~--------~~~~~~~~ 233 (393)
T 3kgw_A 178 QCLLLVDSVASLGG----VPIYMDQQ---GIDIMYSSSQKVLNA-PPGISLISFND--------KAKYKVYS 233 (393)
T ss_dssp TCEEEEECTTTTTT----SCCCTTTT---TCCEEEEESSSTTCC-CSSCEEEEECH--------HHHHHHHT
T ss_pred CCEEEEECCccccC----cccchhhc---CCCEEEecCcccccC-CCceeEEEECH--------HHHHHHhc
Confidence 99999999987421 11112122 234888899997632 23489998843 47777754
No 166
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.88 E-value=6.5e-22 Score=183.38 Aligned_cols=244 Identities=14% Similarity=0.070 Sum_probs=163.4
Q ss_pred cCCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 38 KNDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 38 ~~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
..+++.++||..|.+.. .+. .++.+.+++.++++.... .|....+..++++++++++.+..+ .+.++|++|+|+
T Consensus 46 d~~g~~ylD~~~~~~~~--~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gg 120 (459)
T 4a6r_A 46 DSEGNKIIDGMAGLWCV--NVGYGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSG 120 (459)
T ss_dssp ETTCCEEEETTHHHHTC--TTCBCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSH
T ss_pred ECCCCEEEECCCchhcc--cCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCch
Confidence 34578899998883221 122 468899999998875332 344434556788888888877654 456799999999
Q ss_pred HHHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhcCc-------------eEEEeecCC--C-CCCCCC---
Q 022213 117 KQAVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLP--E-RNWEVD--- 169 (301)
Q Consensus 117 ~~al~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~~--- 169 (301)
++|++.+++.+++ ++++|++.+|+|+++.......+. ....++... . ..+ .|
T Consensus 121 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~ 199 (459)
T 4a6r_A 121 SESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDE 199 (459)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHH
Confidence 9999999999976 579999999999987554443322 223333211 0 111 34
Q ss_pred -----HHHHHhhccc---CccEEEEcCCCC-Cccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccC
Q 022213 170 -----LDAVEALADK---NTAAMVIINPGN-PCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (301)
Q Consensus 170 -----~~~l~~~~~~---~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~ 239 (301)
++.|++.+.+ +..++++++|+| ++|. ..+.+++++|.++|++||+++|+||+|..+.+.+..+ ....++
T Consensus 200 ~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~ 278 (459)
T 4a6r_A 200 FGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFG 278 (459)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcC
Confidence 6788887753 344556666654 4555 5588999999999999999999999999876655322 222333
Q ss_pred CCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHH---hhh-cccCCCccccccc
Q 022213 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK---DCL-SIYSDIPTFIQVC 299 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~q~~ 299 (301)
...+++ +|||+++..|+|+||++++. ++++.+. ... ....+.++++|.+
T Consensus 279 ~~pdi~---t~sK~l~gg~~~lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aa 331 (459)
T 4a6r_A 279 FQPDLF---TAAKGLSSGYLPIGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAV 331 (459)
T ss_dssp CCCSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHH
T ss_pred CCCCee---ehhhhhcCCCCCccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHH
Confidence 333344 68999776669999999843 5777776 222 1233556666654
No 167
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.88 E-value=5.1e-21 Score=176.96 Aligned_cols=199 Identities=13% Similarity=0.029 Sum_probs=154.2
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC---CCEEEcCCHHHHHHHHHHHhcC-------
Q 022213 60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA---DDVYVTLGCKQAVEVILSVLAR------- 129 (301)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~------- 129 (301)
.++.+.+++.+++.... .+|....+..++++++.+++.+.+|...+. ..+++|+|+++++..++.++.+
T Consensus 54 ~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~ 132 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME 132 (452)
T ss_dssp CCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34678888887775332 346555577788888888888877743221 1499999999999999988864
Q ss_pred -CC-----CEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHH
Q 022213 130 -PG-----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ 203 (301)
Q Consensus 130 -~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~ 203 (301)
+| ++|++++ +|..+...++..|++++.+++++ +++.+|+++|++.+++++++|++++|+||||.+.+ ++
T Consensus 133 ~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~ 207 (452)
T 2dgk_A 133 AAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF---PQ 207 (452)
T ss_dssp HTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---HH
T ss_pred hcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HH
Confidence 55 5999999 99999999999999999998854 35789999999999888999999999999999988 88
Q ss_pred HHHHHHHhC------CCeEEEccCCccccc---CCCCCCCccccCCCCC-EEEEecCcccCCCCcceeEEEEeeCC
Q 022213 204 EIAEMARKL------RVMVVADEVYGHLTF---GSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 204 ~i~~~~~~~------~~~ii~D~~y~~~~~---~~~~~~~~~~~~~~~~-vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
+|+++|+++ ++++++|++|+.+.. .+.....+ . ..+ .++..|++|. ++.|.|+||+++.+.
T Consensus 208 ~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~-~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~ 278 (452)
T 2dgk_A 208 PLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF---R-LPRVKSISASGHKF-GLAPLGCGWVIWRDE 278 (452)
T ss_dssp HHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---T-STTEEEEEEETTTT-TCCCSSCEEEEESSG
T ss_pred HHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc---C-CCCCcEEEECcccc-cCCCCCeEEEEEcCH
Confidence 888888884 999999999998653 22111111 1 112 2567788995 789999999998653
No 168
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.88 E-value=1.4e-21 Score=178.73 Aligned_cols=178 Identities=15% Similarity=0.137 Sum_probs=140.4
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEE---cCCHHHHHHHHHHHhcCCCCEEEEcC-CCCcchHH--------
Q 022213 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGANVLLPR-PGWPYYEG-------- 146 (301)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd~Vl~~~-p~~~~~~~-------- 146 (301)
.|+. .|...|++.+|+++. .+..++ ++|+++|+..++.+++++||+|++++ |.|.++..
T Consensus 69 ~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~ 139 (427)
T 3i16_A 69 GYGD-IGRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENS 139 (427)
T ss_dssp CTTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCC
T ss_pred CCCH-HHHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccc
Confidence 3444 356789999999982 233455 88899999999999999999999999 99998763
Q ss_pred ---HHHhcCceEEEeecCCCCCCCCCHHHHHhhcc--cCccEEEEcC----CCCCcccCCCHHHHHHHHHHHHh--CCCe
Q 022213 147 ---IAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIIN----PGNPCGNVFTYHHLQEIAEMARK--LRVM 215 (301)
Q Consensus 147 ---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~----p~nptG~~~~~~~l~~i~~~~~~--~~~~ 215 (301)
.++..|++++.++++. ++.+|++.++++++ +++++|++++ |+||||.+. ++++|+++|++ +|++
T Consensus 140 ~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~---dl~~i~~la~~~~~g~~ 214 (427)
T 3i16_A 140 NMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIE---DIKSIVDCVKNIRKDII 214 (427)
T ss_dssp SSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHH---HHHHHHHHHHHHCTTSE
T ss_pred hHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHH---HHHHHHHHHHHhCCCCE
Confidence 3456789999888754 34689999999998 7889999998 999998774 59999999999 9999
Q ss_pred EEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHhh
Q 022213 216 VVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC 285 (301)
Q Consensus 216 ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~~ 285 (301)
+++|++|..+.+... + + .++ ..|+++|+||.++.+| .+.||++++ ++++++++..
T Consensus 215 livD~a~~~~~~~~~-p--~-~~g---aDiv~~S~sK~lgg~g~~~gG~i~~~--------~~li~~l~~~ 270 (427)
T 3i16_A 215 CFVDNCYGEFMDTKE-P--T-DVG---ADLIAGSLIKNIGGGIAPTGGYLAGT--------KDCIEKTSYR 270 (427)
T ss_dssp EEEECTTTTTSSSSC-G--G-GGT---CSEEEEETTSGGGTTTCCSCEEEEEC--------HHHHHHHHHH
T ss_pred EEEECCCccccccCC-c--c-ccC---CeEEEecCcccCCCCCCceEEEEEEC--------HHHHHHHHHh
Confidence 999999998764321 1 1 111 2389999999988776 678999874 3588888774
No 169
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.88 E-value=4.3e-22 Score=183.94 Aligned_cols=226 Identities=16% Similarity=0.156 Sum_probs=151.5
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
++..+++++.|.+...-.+. ++.+.+++.++++... |... .+..++++++++.+.+..+ .+.++|++|+|+++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse 121 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE 121 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred CCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence 46778999877532111222 6889999998886432 2221 3445666777777766443 46789999999999
Q ss_pred HHHHHHHHhcC--------CCCEEEEcCCCCcchH-HHHHhcCc------------eEEEeecCC--CCCC-CCC-----
Q 022213 119 AVEVILSVLAR--------PGANVLLPRPGWPYYE-GIAQRKQV------------EVRHFDLLP--ERNW-EVD----- 169 (301)
Q Consensus 119 al~~~~~~l~~--------~gd~Vl~~~p~~~~~~-~~~~~~g~------------~~~~~~~~~--~~~~-~~~----- 169 (301)
|++.+++++.. +||+|++.+|+|+++. ..+...|. .+..++... ..++ ++|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 201 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG 201 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence 99999998864 6799999999998753 33443331 234444321 1111 245
Q ss_pred ---HHHHHhhccc---CccEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC
Q 022213 170 ---LDAVEALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (301)
Q Consensus 170 ---~~~l~~~~~~---~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~ 241 (301)
++.|++.+++ ...++++++| +|+||. ..+.+++++|.++|++||+++|+||+|..+.+.+. ...+..++..
T Consensus 202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~~~ 280 (449)
T 3a8u_X 202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS-MFGADSFGVT 280 (449)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc-chhhhhcCCC
Confidence 8999988863 2234556666 467997 55789999999999999999999999987654442 1122223222
Q ss_pred CCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
.+++ |+||.++. | +|+||+++++ ++++.++.
T Consensus 281 ~di~---s~sK~l~~-G~~~~G~~~~~~--------~~~~~l~~ 312 (449)
T 3a8u_X 281 PDLM---CIAKQVTN-GAIPMGAVIAST--------EIYQTFMN 312 (449)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEEEH--------HHHHHHHT
T ss_pred CCEE---EEcccccC-CCCceEEEEECH--------HHHHHhhc
Confidence 3333 88999874 7 9999998853 47777765
No 170
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.87 E-value=2.9e-22 Score=182.83 Aligned_cols=215 Identities=14% Similarity=0.117 Sum_probs=141.4
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCC
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (301)
...|+|..++. +.++.+.+++.+.+.......|+ ...+..++++.+.+.+.+.++ .++++|++++|
T Consensus 25 ~~~i~l~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG 96 (417)
T 3n0l_A 25 CEGLEMIASEN------FTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG 96 (417)
T ss_dssp HHSEECCTTCC------CCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH
T ss_pred hcCeeeecccC------CCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH
Confidence 35688866542 23678889888777432111222 222234555544444444333 45667888777
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhcC--ceEEEeecCCCCCCCCCHHHHHhhcc-cCccEEEEcCC
Q 022213 116 CKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQ--VEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINP 189 (301)
Q Consensus 116 ~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p 189 (301)
++++..++.+++++||+|+++.|+|.++.. .+...| ..++.++++ .++.+|++.+++.++ .+++++++++|
T Consensus 97 -t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~ 173 (417)
T 3n0l_A 97 -SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGAS 173 (417)
T ss_dssp -HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCS
T ss_pred -HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCc
Confidence 799999999999999999999999987543 333333 445555543 566799999999987 58899988888
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCc-ccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+| |...+ +++|.++|++||+++|+|+++. ...+.+..+..+. ...+++.|+||++ +|.|+||+++++
T Consensus 174 ~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~ 241 (417)
T 3n0l_A 174 AY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND 241 (417)
T ss_dssp SC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC
T ss_pred cc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC
Confidence 86 88888 8899999999999999999964 4444433232222 1238899999985 788999999854
Q ss_pred CCCcccchhHHHHHHhhh
Q 022213 269 PNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~ 286 (301)
++++++++...
T Consensus 242 -------~~~~~~~~~~~ 252 (417)
T 3n0l_A 242 -------EELAKKINSAI 252 (417)
T ss_dssp -------HHHHHHHHHHH
T ss_pred -------HHHHHHHhhhh
Confidence 24777776654
No 171
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.87 E-value=4.8e-22 Score=182.98 Aligned_cols=206 Identities=16% Similarity=0.144 Sum_probs=134.9
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcC
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (301)
.+++.+|||..|.+. ..++ .++.+.+++.++++... .|.. .....++++.+++++ ..++|++++
T Consensus 62 ~~G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~ 129 (433)
T 1z7d_A 62 VNDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLT--ICSRAFFSVPLGICERYLTNLL--------GYDKVLMMN 129 (433)
T ss_dssp TTCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCS--CCCTTSEEHHHHHHHHHHHHHH--------TCSEEEEES
T ss_pred CCCCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCC--CccCCcCCHHHHHHHHHHHhhc--------CCCeEEEeC
Confidence 346778999887432 1255 77899999999987432 1211 112234555555554 257999999
Q ss_pred CHHHHHHHHHHHhc---------CCC-CEEEEcCCCCcchHH-HHHhcC------------ceEEEeecCCCCCCCCCHH
Q 022213 115 GCKQAVEVILSVLA---------RPG-ANVLLPRPGWPYYEG-IAQRKQ------------VEVRHFDLLPERNWEVDLD 171 (301)
Q Consensus 115 g~~~al~~~~~~l~---------~~g-d~Vl~~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~~ 171 (301)
|+++|++.+++.+. .+| |+|++++|+|+++.. .+...+ .++..++. .|++
T Consensus 130 sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~ 202 (433)
T 1z7d_A 130 TGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLE 202 (433)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHH
T ss_pred CHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHH
Confidence 99999999998864 367 999999999987543 222223 23333332 3899
Q ss_pred HHHhhc-ccCccEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEec
Q 022213 172 AVEALA-DKNTAAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (301)
Q Consensus 172 ~l~~~~-~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s 249 (301)
.+++.+ +++++++++...+|++|.+ ++.+.+++|.++|++||+++|+||+|..+.+.+. ...+..++...+++ |
T Consensus 203 ~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~-~~~~~~~~~~~di~---t 278 (433)
T 1z7d_A 203 ALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK-LLCVHHYNVKPDVI---L 278 (433)
T ss_dssp HHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGTCCCSEE---E
T ss_pred HHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc-chhhHhcCCCCCEE---E
Confidence 999988 4555555444335678975 6888999999999999999999999987655442 22222222223343 8
Q ss_pred CcccCCCCc-ceeEEEEeeC
Q 022213 250 ISKRWLVPG-WRFGWLVTND 268 (301)
Q Consensus 250 ~SK~~~~~G-~rvG~~~~~~ 268 (301)
+||.++ +| +|+||+++++
T Consensus 279 ~sK~l~-~G~~~~G~v~~~~ 297 (433)
T 1z7d_A 279 LGKALS-GGHYPISAVLAND 297 (433)
T ss_dssp ECGGGG-TTSSCCEEEEECH
T ss_pred ECcccc-CCCCCeEEEEECH
Confidence 999987 79 9999999843
No 172
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=9.4e-22 Score=177.83 Aligned_cols=200 Identities=18% Similarity=0.191 Sum_probs=153.0
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH-HHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHh-cCCCCE
Q 022213 56 PCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI-ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGAN 133 (301)
Q Consensus 56 p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i-a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~ 133 (301)
|++++++.+.+++.+.++++.+..|++ ...+|++++ |+++. ..+++++++|+++|+..++.++ +++||+
T Consensus 10 p~~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~ 80 (377)
T 3ju7_A 10 ASTVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKY 80 (377)
T ss_dssp CCCCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCE
T ss_pred CCCCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCE
Confidence 457888899999999888654322333 468999999 99972 1567999999999999999998 899999
Q ss_pred EEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc-ccC--ccEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 022213 134 VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA-DKN--TAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210 (301)
Q Consensus 134 Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~~~~ 210 (301)
|+++.|+|..+...+...|.+++++++++ +++.+|++.+++++ +++ +++++ |+||+|...+ +++|.++|+
T Consensus 81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~ 153 (377)
T 3ju7_A 81 ALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK 153 (377)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh
Confidence 99999999999999999999999999864 46789999999988 555 77665 7889999998 788888899
Q ss_pred hCCCeEEEccCCcccccCCCCCCCc-cccCCCCCEEEEec--CcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc
Q 022213 211 KLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITLGS--ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS 287 (301)
Q Consensus 211 ~~~~~ii~D~~y~~~~~~~~~~~~~-~~~~~~~~vi~~~s--~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (301)
+|+++|+|++|+....... ..+ ..+. + +.+.| .+|.++. | +.|+++.++ +++.++++....
T Consensus 154 -~~~~vi~D~a~a~g~~~~~--~~~g~~~~---d-~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~ 217 (377)
T 3ju7_A 154 -KGVPVVVDAAPGFGLMNGG--MHYGQDFS---G-MIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGN 217 (377)
T ss_dssp -TTCCBEEECTTCTTCEETT--EETTTTCS---S-EEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTB
T ss_pred -cCCEEEEECCCccCCeECC--EeccCCCC---c-EEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHh
Confidence 9999999999986432111 111 1111 1 44555 4698775 5 678887754 357777776654
No 173
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.87 E-value=5.3e-22 Score=183.55 Aligned_cols=206 Identities=17% Similarity=0.148 Sum_probs=138.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
++..+|+|+.|.+...-.+ .++.+.+++.++++... .| .+..++++++++++.+.++ +.++|++|+|+++|
T Consensus 55 ~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA 125 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP---SIRKLRFTGSGTET 125 (453)
T ss_dssp TCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHH
T ss_pred CCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHH
Confidence 4677899998864322122 67889999999887532 23 2456899999999988654 56899999999999
Q ss_pred HHHHHHH---hcCCCCEEEEcCCCCcchHHHHHh-----------cCce------EEEeecCCCCCCCCCHHHHHhhccc
Q 022213 120 VEVILSV---LARPGANVLLPRPGWPYYEGIAQR-----------KQVE------VRHFDLLPERNWEVDLDAVEALADK 179 (301)
Q Consensus 120 l~~~~~~---l~~~gd~Vl~~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (301)
++.+++. +.+ ++.|++.+|+|+++...+.. .|+. +..++. .|++.+++.+++
T Consensus 126 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~ 197 (453)
T 2cy8_A 126 TLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFAN 197 (453)
T ss_dssp HHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHh
Confidence 9999998 654 46888888999875432221 1221 222221 488999988863
Q ss_pred --CccEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCC
Q 022213 180 --NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (301)
Q Consensus 180 --~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~ 255 (301)
...++++++| +|+||.+. +.+++++|.++|++||+++|+||+|.++ +.+. ...+..++...+++ |+||.++
T Consensus 198 ~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~di~---s~sK~l~ 272 (453)
T 2cy8_A 198 HGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPDLT---CLAKASA 272 (453)
T ss_dssp HGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCSEE---EEEGGGG
T ss_pred cCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCcEE---EEChhhh
Confidence 1234455666 47799765 7999999999999999999999999987 4332 11222222222333 8999987
Q ss_pred CCcceeEEEEeeC
Q 022213 256 VPGWRFGWLVTND 268 (301)
Q Consensus 256 ~~G~rvG~~~~~~ 268 (301)
. |+|+||+++++
T Consensus 273 ~-G~~~G~v~~~~ 284 (453)
T 2cy8_A 273 G-GLPGGILGGRE 284 (453)
T ss_dssp T-TSSCEEEEECH
T ss_pred C-CcceEEEechH
Confidence 5 99999999853
No 174
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.87 E-value=1.4e-21 Score=178.80 Aligned_cols=195 Identities=17% Similarity=0.164 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEE---cCCHHHHHHHHHHHhcCCCC
Q 022213 62 VEAEDAIVDAVRS------GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGA 132 (301)
Q Consensus 62 ~~~~~~~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd 132 (301)
+.+.+++.+.... .....|+.. |...|++.+|+++ ..+..++ ++|+++|+..++.++++|||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~--------g~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIF--------NTESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHH--------TCSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHh--------CCCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 4566666654221 122345553 6778999999988 2344566 88999999999999999999
Q ss_pred EEEEcC-CCCcchH-----------HHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc--cCccEEEEcC----CCCCcc
Q 022213 133 NVLLPR-PGWPYYE-----------GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIIN----PGNPCG 194 (301)
Q Consensus 133 ~Vl~~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~l~~----p~nptG 194 (301)
+|++++ |.|.++. ..++..|++++.++. +++.+|+++++++++ +++++|++++ |+||||
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg 194 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL 194 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence 999999 9998876 334567999998886 345799999999998 7899999998 999998
Q ss_pred cCCCHHHHHHHHHHHHh--CCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCc-ceeEEEEeeCCCC
Q 022213 195 NVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNG 271 (301)
Q Consensus 195 ~~~~~~~l~~i~~~~~~--~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~ 271 (301)
.+. ++++|+++|++ +|+++++|++|..+.+... + +. ++ ..|+++|+||+++.+| .+.||++++
T Consensus 195 ~v~---dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~-p--~~-~g---aDiv~~S~sK~lgg~g~~~GG~i~~~---- 260 (427)
T 3hvy_A 195 RIA---EIAEIIKSIREVNENVIVFVDNCYGEFVEEKE-P--TD-VG---ADIIAGSLIKNIGGGIATTGGYIAGK---- 260 (427)
T ss_dssp CHH---HHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC-G--GG-GT---CSEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred cHH---HHHHHHHHHHHhCCCCEEEEECCccccccCCC-C--cc-cC---CeEEEECCcccccccccceEEEEEEC----
Confidence 765 59999999999 8999999999988764321 1 11 11 2389999999987766 566888873
Q ss_pred cccchhHHHHHHhhh
Q 022213 272 IFQKSGIIDSIKDCL 286 (301)
Q Consensus 272 ~~~~~~~~~~~~~~~ 286 (301)
++++++++...
T Consensus 261 ----~~li~~l~~~~ 271 (427)
T 3hvy_A 261 ----EEYVTQATFRV 271 (427)
T ss_dssp ----HHHHHHHHHHH
T ss_pred ----HHHHHHHHHHh
Confidence 35888887753
No 175
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.87 E-value=3.8e-22 Score=184.59 Aligned_cols=242 Identities=16% Similarity=0.055 Sum_probs=160.1
Q ss_pred CCCCeeeccCCCCCCCCCC-CChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 40 DPRPVVPLGYGDPTAFPCF-RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
+++.+|||..|.+.. .+ ..++.+.+++.++++.. ..|....+..+.+.++++++.+..+. ...++|++|+|+++
T Consensus 59 ~g~~ylD~~~~~~~~--~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGse 133 (451)
T 3oks_A 59 DGNRLIDLGSGIAVT--TVGNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSE 133 (451)
T ss_dssp TSCEEEESSHHHHTC--TTCTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHH
T ss_pred CCCEEEEcCCCcccc--ccCCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHH
Confidence 467788888773321 12 24788999999998743 34555456678888888888776542 13578999999999
Q ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCc--------------eEEEeecCCC--C---C---CC---CCHH
Q 022213 119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPE--R---N---WE---VDLD 171 (301)
Q Consensus 119 al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~--~---~---~~---~~~~ 171 (301)
|++.+++.+.. .+++|++.+++|+++.......+. .+..++.... . + .. .+++
T Consensus 134 A~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 213 (451)
T 3oks_A 134 AVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAK 213 (451)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHH
Confidence 99999988764 458999999999977544433321 3444444210 0 0 00 1233
Q ss_pred HHHhhc----ccCccEEEEcCCCCCcc--cCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEE
Q 022213 172 AVEALA----DKNTAAMVIINPGNPCG--NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (301)
Q Consensus 172 ~l~~~~----~~~~~~v~l~~p~nptG--~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi 245 (301)
.+++.+ ..+..+++++.|.|++| ...+.+.+++|.++|++||+++|+||+|..+.+.+. ...+..++...+++
T Consensus 214 ~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~~~pdi~ 292 (451)
T 3oks_A 214 RAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA-MFACEHEGIDPDLI 292 (451)
T ss_dssp HHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGTCCCSEE
T ss_pred HHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc-chhhhhcCCCCCee
Confidence 333333 33456777888877666 344677899999999999999999999998766553 22333333333344
Q ss_pred EEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhhc-ccCCCccccccc
Q 022213 246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQVC 299 (301)
Q Consensus 246 ~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 299 (301)
||||.++. |+|+||++++. ++++.++.... ...+.++++|.+
T Consensus 293 ---t~sK~l~~-G~~iG~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aa 335 (451)
T 3oks_A 293 ---VTAKGIAG-GLPLSAVTGRA--------EIMDSPHVSGLGGTYGGNPIACAA 335 (451)
T ss_dssp ---EECGGGGT-TSSCEEEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHH
T ss_pred ---eehhhhhC-CcceEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHH
Confidence 88999876 99999998843 46666654332 234566676654
No 176
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.87 E-value=2.2e-21 Score=178.88 Aligned_cols=205 Identities=14% Similarity=0.105 Sum_probs=144.7
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFN--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 40 ~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
+++.+|||..|.+.. .++ .++.+.+++.++++..... .|. .....++++.+++++ ..++|++++|+
T Consensus 74 ~g~~ylD~~sg~~~~--~lgh~~p~v~~Ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sG 142 (439)
T 2oat_A 74 EGRKYFDFLSSYSAV--NQGHCHPKIVNALKSQVDKLTLTSRAFY-NNVLGEYEEYITKLF--------NYHKVLPMNTG 142 (439)
T ss_dssp TCCEEEESSGGGGTT--TTCBTCHHHHHHHHHHHTTCSCCCTTSE-ESSHHHHHHHHHHHH--------TCSEEEEESSH
T ss_pred CCCEEEEccCCcccc--cCCCCCHHHHHHHHHHHHhcCcccCccC-CHHHHHHHHHHHHhc--------CCCEEEEeCCH
Confidence 466789998875431 255 7789999999998753211 122 223466777777776 25789999999
Q ss_pred HHHHHHHHHHhc---------CCC-CEEEEcCCCCcchH-HHHHhcC------------ceEEEeecCCCCCCCCCHHHH
Q 022213 117 KQAVEVILSVLA---------RPG-ANVLLPRPGWPYYE-GIAQRKQ------------VEVRHFDLLPERNWEVDLDAV 173 (301)
Q Consensus 117 ~~al~~~~~~l~---------~~g-d~Vl~~~p~~~~~~-~~~~~~g------------~~~~~~~~~~~~~~~~~~~~l 173 (301)
++|++.+++.+. .+| |+|++.+|+|+++. ..+...+ .++..++. .|++.+
T Consensus 143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 215 (439)
T 2oat_A 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL 215 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHH
Confidence 999999999875 357 89999999998753 3333333 34444443 389999
Q ss_pred Hhhcc-cCccEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecC
Q 022213 174 EALAD-KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (301)
Q Consensus 174 ~~~~~-~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~ 250 (301)
++.++ ++++++ +++| +|++|. ..+.+.+++|.++|++||+++|+||+|.++.+.+.. ..+..++...+++ |+
T Consensus 216 e~~l~~~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~-~~~~~~~~~~Di~---t~ 290 (439)
T 2oat_A 216 ERALQDPNVAAF-MVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRW-LAVDYENVRPDIV---LL 290 (439)
T ss_dssp HHHTTSTTEEEE-EECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EE
T ss_pred HHHhCCCCEEEE-EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcc-hhHHHhCCCCcEE---Ee
Confidence 99884 445444 4555 567896 568889999999999999999999999876554432 2222233223343 89
Q ss_pred cccCCCCc-ceeEEEEeeC
Q 022213 251 SKRWLVPG-WRFGWLVTND 268 (301)
Q Consensus 251 SK~~~~~G-~rvG~~~~~~ 268 (301)
||.++ +| +|+||+++++
T Consensus 291 sK~l~-~G~~~~G~v~~~~ 308 (439)
T 2oat_A 291 GKALS-GGLYPVSAVLCDD 308 (439)
T ss_dssp CGGGG-TTSSCCEEEEECH
T ss_pred ccccc-CCCCCeEEEEECH
Confidence 99987 58 9999999853
No 177
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.87 E-value=2e-21 Score=180.16 Aligned_cols=245 Identities=16% Similarity=0.073 Sum_probs=160.5
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
.+++.+|||..|.... +.-..++.+.+++.++++.... .|....+..++++++++++.+..+ .+.++|++|+|+++
T Consensus 48 ~~G~~~lD~~~~~~~~-~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGse 123 (460)
T 3gju_A 48 NNGRKSIDAFAGLYCV-NVGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSD 123 (460)
T ss_dssp TTCCEEEETTHHHHTC-TTCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred CCCCEEEECCcchhhc-cCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHH
Confidence 4578899999883211 1122468899999888874322 344444556778888888877543 46679999999999
Q ss_pred HHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhcCc-------------eEEEeecCCC---CCCCCC-----
Q 022213 119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPE---RNWEVD----- 169 (301)
Q Consensus 119 al~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~---~~~~~~----- 169 (301)
|++.+++.+.. ++++|++.+++|+++.......+. .+..++.... ++++.+
T Consensus 124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 203 (460)
T 3gju_A 124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS 203 (460)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence 99999999874 469999999999987544433321 2344442110 111233
Q ss_pred ---HHHHHhhccc---CccEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC
Q 022213 170 ---LDAVEALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (301)
Q Consensus 170 ---~~~l~~~~~~---~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~ 241 (301)
++.|++.+.+ +..++++++| +|++|. +.+.+.+++|.++|++||+++|+||+|..+.+.+..+ ....++..
T Consensus 204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~ 282 (460)
T 3gju_A 204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIK 282 (460)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCC
Confidence 5788887752 2334444555 666776 7788899999999999999999999999876554322 22233333
Q ss_pred CCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhh-------h-cccCCCccccccc
Q 022213 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------L-SIYSDIPTFIQVC 299 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~q~~ 299 (301)
.+++ +|||+++..++|+||++++. ++++.+... . ....+.++++|.+
T Consensus 283 pdi~---t~sK~l~gG~~~lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aa 337 (460)
T 3gju_A 283 PDLI---TIAKGLTSAYAPLSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAA 337 (460)
T ss_dssp CSEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHH
T ss_pred CCee---eeehhhcCCCCCeEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHH
Confidence 3333 78999754338999999854 577777531 1 1233556666654
No 178
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.87 E-value=2.2e-21 Score=176.95 Aligned_cols=196 Identities=14% Similarity=0.089 Sum_probs=142.0
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEc
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--------NSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (301)
++++.|+.+.+. +.|+.+.+++.+++... ...+.. .....++++.+++++ +.++++|++|
T Consensus 27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~ 94 (416)
T 1qz9_A 27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVT 94 (416)
T ss_dssp TTCEECCTTTSC-----CCBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEEC
T ss_pred CCeEeecCCCcC-----CCcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEe
Confidence 567888888643 45667889998888642 111110 122356666666665 3467899999
Q ss_pred CCHHHHHHHHHHHhc------CCCCEEE-EcCCCCcchHHH----HHhc--CceEEEeecCCCCCCCCCHHHHHhhcccC
Q 022213 114 LGCKQAVEVILSVLA------RPGANVL-LPRPGWPYYEGI----AQRK--QVEVRHFDLLPERNWEVDLDAVEALADKN 180 (301)
Q Consensus 114 ~g~~~al~~~~~~l~------~~gd~Vl-~~~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 180 (301)
+|+++++..++.+++ ++||+|+ ++.++|..+... .+.. |.+++.+++ ++++++.++++
T Consensus 95 ~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~ 165 (416)
T 1qz9_A 95 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQD 165 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTT
T ss_pred CChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCC
Confidence 999999999998886 8999754 555677754332 2233 888888764 68899888888
Q ss_pred ccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcce
Q 022213 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (301)
Q Consensus 181 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~r 260 (301)
++++++++|+||||.+++ +++|.++|+++|+++|+|++|... .....+..++ ..+++.|+||.+ .+|.|
T Consensus 166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~---~d~~~~s~~K~l-~~g~~ 234 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAG----AVPVDLHQAG---ADYAIGCTYKYL-NGGPG 234 (416)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCHHHHT---CSEEEECSSSTT-CCCTT
T ss_pred ceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEcccccc----CcCCChhhcC---CCEEEecCcccC-CCCCC
Confidence 899999999999999999 888999999999999999999842 1222232222 238889999995 46777
Q ss_pred e-EEEEeeCC
Q 022213 261 F-GWLVTNDP 269 (301)
Q Consensus 261 v-G~~~~~~~ 269 (301)
+ ||+++++.
T Consensus 235 ~~g~l~~~~~ 244 (416)
T 1qz9_A 235 SQAFVWVSPQ 244 (416)
T ss_dssp CCCEEEECTT
T ss_pred CeEEEEECHH
Confidence 7 99998653
No 179
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.87 E-value=1.8e-21 Score=178.62 Aligned_cols=157 Identities=19% Similarity=0.154 Sum_probs=129.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCceEEEeec
Q 022213 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL 160 (301)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~ 160 (301)
...+|++.+++++. .+..++++++++|+..++++++++||+|+++.|.|.++.. .+...|+++++++.
T Consensus 83 ~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~ 154 (430)
T 3ri6_A 83 TVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDV 154 (430)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence 45788888888872 2346777777899999999999999999999999998766 66788999999876
Q ss_pred CCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC
Q 022213 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (301)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~ 240 (301)
. |++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .+. .++
T Consensus 155 ~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~~-~~g- 218 (430)
T 3ri6_A 155 M-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EAK-RLG- 218 (430)
T ss_dssp T-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CGG-GGT-
T ss_pred C-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----ChH-HcC-
Confidence 2 899999999989999999999999999998 888899999999999999999864431 111 121
Q ss_pred CCCEEEEecCcccCCCCcceeEEEEee
Q 022213 241 IVPVITLGSISKRWLVPGWRFGWLVTN 267 (301)
Q Consensus 241 ~~~vi~~~s~SK~~~~~G~rvG~~~~~ 267 (301)
..+++.|+||.++.+|..+|.+++.
T Consensus 219 --~div~~S~sK~l~g~g~~~gG~vv~ 243 (430)
T 3ri6_A 219 --VDIEVLSSTKFISGGGTSVGGVLID 243 (430)
T ss_dssp --CSEEEEECCCEEETTEEECCEEEEE
T ss_pred --CEEEEECCcccccCCCCceEEEEEE
Confidence 2389999999999888777777763
No 180
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.87 E-value=4.9e-22 Score=184.26 Aligned_cols=211 Identities=18% Similarity=0.186 Sum_probs=146.7
Q ss_pred CCCeeeccCCCC--CCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 41 PRPVVPLGYGDP--TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 41 ~~~~i~l~~g~p--~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
+..+++|..|++ +..+..++ +.+.+++.+++..+. ..|++..+..+||+++++++. .+++++|+|+++
T Consensus 31 g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~ 100 (467)
T 2oqx_A 31 GMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRG 100 (467)
T ss_dssp TSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CC
T ss_pred CCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHH
Confidence 556677777654 11122333 566777777775433 368777788899999999982 368999999999
Q ss_pred HHHHHHHHhcCC-----C----CEEEEcCCCCcchHHHHHhcCceEEEeecC----CC----CCCCCCHHHHHhhccc--
Q 022213 119 AVEVILSVLARP-----G----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLL----PE----RNWEVDLDAVEALADK-- 179 (301)
Q Consensus 119 al~~~~~~l~~~-----g----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~----~~----~~~~~~~~~l~~~~~~-- 179 (301)
|+..++++++++ | |+|++..+.|..+.......+..+...... .. .++.+|++.|++.+++
T Consensus 101 A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~ 180 (467)
T 2oqx_A 101 AEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG 180 (467)
T ss_dssp SHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC
Confidence 999999999888 8 998877444444555555566665543211 11 2345899999999873
Q ss_pred --CccEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCeEEEccCCcc----------cccCCCCCCCccccC----CCC
Q 022213 180 --NTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGH----------LTFGSIPYTPMGLFG----SIV 242 (301)
Q Consensus 180 --~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~----------~~~~~~~~~~~~~~~----~~~ 242 (301)
+++++++++|+||+ |.+++.+++++|+++|++||+++|+|+++.. ..+.+.. ...+. ...
T Consensus 181 ~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~---~~~~~~~~~~~~ 257 (467)
T 2oqx_A 181 PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWT---IEQITRETYKYA 257 (467)
T ss_dssp GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSC---HHHHHHHHGGGC
T ss_pred CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCcc---HHHHhhhhhccC
Confidence 68899999999998 8999999999999999999999999966543 1232221 21211 111
Q ss_pred CEEEEecCcccCCCC-cceeEEEEeeC
Q 022213 243 PVITLGSISKRWLVP-GWRFGWLVTND 268 (301)
Q Consensus 243 ~vi~~~s~SK~~~~~-G~rvG~~~~~~ 268 (301)
+ +++.|+||.+++| | ||+++++
T Consensus 258 d-~~~~s~sK~~g~~~G---g~~~~~~ 280 (467)
T 2oqx_A 258 D-MLAMSAKKDAMVPMG---GLLCMKD 280 (467)
T ss_dssp S-EEEEESSSTTCCSSC---EEEEECS
T ss_pred C-eEEEecccccCCCCc---eEEEecC
Confidence 2 4578999998877 5 7777643
No 181
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.87 E-value=6.5e-21 Score=174.99 Aligned_cols=180 Identities=19% Similarity=0.203 Sum_probs=136.8
Q ss_pred HHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC-CCCcchHHHH----------HhcCceEEE
Q 022213 89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR-PGWPYYEGIA----------QRKQVEVRH 157 (301)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~-p~~~~~~~~~----------~~~g~~~~~ 157 (301)
.++++.+.+.+.++......+++++ ++++|+..++.+++++||+|+++. |.|..+...+ +..|.+++.
T Consensus 66 ~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~ 144 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA 144 (431)
T ss_dssp HHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred hHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence 3555555555544433222233355 678999999999999999999998 9999887544 457899999
Q ss_pred eecCCCCCCCCCHHHHHhhcccCccEEEEc-CCCCCcccCCCHHHHHHHHHHHHh--CCCeEEEccCCcccccCCCCCCC
Q 022213 158 FDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTP 234 (301)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~--~~~~ii~D~~y~~~~~~~~~~~~ 234 (301)
++++. ++.+|++.+++++++++++|+++ +|+||+|.+.+.+++++|+++|++ +|+++|+|++|..+.+... +..
T Consensus 145 v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~-~~~ 221 (431)
T 3ht4_A 145 VPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQE-PCH 221 (431)
T ss_dssp CCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCC-GGG
T ss_pred eCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCC-ccc
Confidence 98754 36799999999999889999998 599999999999999999999999 9999999999999876432 111
Q ss_pred ccccCCCCCEEEEecCcccCCC-CcceeEEEEeeCCCCcccchhHHHHHHhhh
Q 022213 235 MGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 235 ~~~~~~~~~vi~~~s~SK~~~~-~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
+.. .++++|+||+++. .+...||++++ ++++++++...
T Consensus 222 ---~g~---Di~~~S~sK~lgg~~~~~GG~v~~~--------~~li~~l~~~~ 260 (431)
T 3ht4_A 222 ---VGA---DLMAGSLIKNPGGGIVKTGGYIVGK--------EQYVEACAYRL 260 (431)
T ss_dssp ---TTC---SEEEEETTSGGGTTTCSSCEEEEEC--------HHHHHHHHHHH
T ss_pred ---cCC---eEEEcCccccCCCCCCCceEEEEec--------HHHHHHHHHHh
Confidence 121 2899999999553 22333999974 25788887643
No 182
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.86 E-value=1.4e-21 Score=180.45 Aligned_cols=226 Identities=14% Similarity=0.056 Sum_probs=144.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
.+++.+|||..|.+...-. ..++.+.+++.++++.. ..|....+..+.+.++++++.+..+ .+.++|++|+|+++
T Consensus 41 ~~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse 115 (448)
T 3dod_A 41 INGKEYYDGFSSVWLNVHG-HRKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAE 115 (448)
T ss_dssp TTSCEEEETTHHHHTCSSC-BSCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence 4578899998874321111 24688999999988743 2333334556788888888877654 34579999999999
Q ss_pred HHHHHHHHhcC----CC----CEEEEcCCCCcchHHHHHhcCc-------------eEEEeecCCCCCCCC---------
Q 022213 119 AVEVILSVLAR----PG----ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEV--------- 168 (301)
Q Consensus 119 al~~~~~~l~~----~g----d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------- 168 (301)
|++.+++.+.. +| |+|++.+|+|+++.......+. ....++. ...+..
T Consensus 116 A~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 193 (448)
T 3dod_A 116 AMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECR 193 (448)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhh
Confidence 99999999875 44 9999999999876543333221 1222222 111111
Q ss_pred --CHHHHHhhcc---cCccEEEEcCCC-CCcc-cCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC
Q 022213 169 --DLDAVEALAD---KNTAAMVIINPG-NPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (301)
Q Consensus 169 --~~~~l~~~~~---~~~~~v~l~~p~-nptG-~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~ 241 (301)
|++.|++.++ ++++++++..++ |++| .+.+.+.+++|.++|++||+++|+||+|..+.+.+..+ ....++-.
T Consensus 194 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~ 272 (448)
T 3dod_A 194 DQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQ 272 (448)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCC
Confidence 3788888876 233444444445 7777 45677889999999999999999999999876655432 22333323
Q ss_pred CCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
.+++ +|||.++. | +|+||++++. ++++.++.
T Consensus 273 ~di~---t~sK~l~~-G~~~ig~v~~~~--------~~~~~~~~ 304 (448)
T 3dod_A 273 PDLM---AAGKGITG-GYLPIAVTFATE--------DIYKAFYD 304 (448)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEEEH--------HHHHTTCS
T ss_pred CCEE---EecccccC-CcCceEEEEECH--------HHHHHhhh
Confidence 3333 78999865 8 5999999853 47777765
No 183
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.86 E-value=1.2e-20 Score=173.74 Aligned_cols=167 Identities=13% Similarity=0.145 Sum_probs=131.7
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhcCceEEEeecC
Q 022213 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDLL 161 (301)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 161 (301)
..++|+.+++++. .+ +.++++ ++++++..++++++++||+|+++.+.|.++... ++..|+++++++.
T Consensus 116 ~~~l~~~lA~l~g------~~-~~v~~~-sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~- 186 (445)
T 1qgn_A 116 TVVLEEKISALEG------AE-STLLMA-SGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP- 186 (445)
T ss_dssp HHHHHHHHHHHHT------CS-EEEEES-CHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS-
T ss_pred HHHHHHHHHHHhC------CC-cEEEeC-CHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC-
Confidence 4588999999872 22 445554 555999999999999999999999999986653 4567999998875
Q ss_pred CCCCCCCCHHHHHhhcccCc-cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC
Q 022213 162 PERNWEVDLDAVEALADKNT-AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (301)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~-~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~ 240 (301)
.|++.+++.+++++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .++ .++
T Consensus 187 ------~d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~-~~g- 251 (445)
T 1qgn_A 187 ------ADVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-ALG- 251 (445)
T ss_dssp ------SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TTT-
T ss_pred ------CCHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-ccC-
Confidence 28999999998888 99999999999999999 889999999999999999999864322 111 122
Q ss_pred CCCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHhhh
Q 022213 241 IVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 241 ~~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
..++++|+||.++.+| .++||+++++ +++++++...
T Consensus 252 --~Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~ 288 (445)
T 1qgn_A 252 --ADLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLH 288 (445)
T ss_dssp --CSEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHH
T ss_pred --CEEEEECCcccccccccceEEEEEECH--------HHHHHHHHHH
Confidence 2389999999988665 5799999843 4667666544
No 184
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.86 E-value=4.7e-22 Score=177.98 Aligned_cols=213 Identities=16% Similarity=0.116 Sum_probs=149.1
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
....+.++.|.. .+++++.+.+++.+.+. ...|++..+..+|++++++++. . +..++++|+++++
T Consensus 12 ~~~~~~~~~~~~----~~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~~g~~a~ 76 (359)
T 3pj0_A 12 KTPYKLGGNGPR----NVGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG------K--QSAVFFPSGTMAQ 76 (359)
T ss_dssp TCSEESSSSSCC----BHHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHH
T ss_pred hcchhhcCCCcc----ccCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC------C--CcEEEeCCHHHHH
Confidence 345555655542 24566777777766432 2357766678899999999982 2 2335568889999
Q ss_pred HHHHHHhcCCCCE--EEEcCCCCcchH---HHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCc-c
Q 022213 121 EVILSVLARPGAN--VLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC-G 194 (301)
Q Consensus 121 ~~~~~~l~~~gd~--Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt-G 194 (301)
..++++++++||+ |+++.++|.... ......|.+++.++. +++.+|++++++. .++++++++++|+||+ |
T Consensus 77 ~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G 152 (359)
T 3pj0_A 77 QIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGG 152 (359)
T ss_dssp HHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTS
T ss_pred HHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCc
Confidence 9999999988886 555555544321 222456889888875 3457999999998 6789999999999998 7
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEccCCccccc--CCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCc
Q 022213 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI 272 (301)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~--~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~ 272 (301)
.+++.+++++|+++|++||+++|+|++|..... .+.....+. ...+ +++.|+||+++.++ + ||++.+
T Consensus 153 ~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~-g-g~~~~~----- 221 (359)
T 3pj0_A 153 QLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIA-G-AILAGN----- 221 (359)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSS-C-EEEEEC-----
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcc-e-EEEECC-----
Confidence 999999999999999999999999999875432 111111111 1122 45569999987763 2 677653
Q ss_pred ccchhHHHHHHhhh
Q 022213 273 FQKSGIIDSIKDCL 286 (301)
Q Consensus 273 ~~~~~~~~~~~~~~ 286 (301)
++++++++...
T Consensus 222 ---~~l~~~~~~~~ 232 (359)
T 3pj0_A 222 ---DDFVQEAKIWK 232 (359)
T ss_dssp ---HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHH
Confidence 35777777643
No 185
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.86 E-value=6.5e-21 Score=177.37 Aligned_cols=204 Identities=19% Similarity=0.206 Sum_probs=151.4
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (301)
.++.|+ |... ...+.+.+++.+.+. .++.|.+ .+|..++++++++++.+..|.+ . .+++++|++++
T Consensus 67 ~~~~lg-~~~~-----~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~-~~~~~~ggt~a 135 (474)
T 1wyu_B 67 TFYPLG-SCTM-----KYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMD--A-ITLEPAAGAHG 135 (474)
T ss_dssp SCCCBT-TTCC-----CCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS--E-EECCCSSHHHH
T ss_pred Cccccc-cccc-----cCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCC--c-eeecChHHHHH
Confidence 578887 5421 222344555544321 2233443 4566788888888887766643 2 36788999999
Q ss_pred HHHHHHHh----cCCCC-----EEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCC
Q 022213 120 VEVILSVL----ARPGA-----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190 (301)
Q Consensus 120 l~~~~~~l----~~~gd-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 190 (301)
+..++.++ .++|| +|+++.|+|..+...++..|.+++.++++. ++.+|+++|++.++++++++++++|
T Consensus 136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~~t~~v~~~~p- 212 (474)
T 1wyu_B 136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGPHVAALMLTNP- 212 (474)
T ss_dssp HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCCCceEEEEECC-
Confidence 98866655 35888 999999999999999999999999998753 4679999999999888899999998
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCC-c---ceeEEEEe
Q 022213 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-G---WRFGWLVT 266 (301)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~-G---~rvG~~~~ 266 (301)
||||.+. +.+++|+++|+++|+++|+|++|....++. .....++ ..+++.|+||+|++| | .|+||+++
T Consensus 213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~g---~di~~~s~~K~~~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDMG---FDVVHLNLHKTFTVPHGGGGPGSGPVGV 284 (474)
T ss_dssp CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHHT---CSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC---CCcccCC---CcEEEEeCccccccCCCCCCCCeEEEEE
Confidence 6899883 238999999999999999999998766431 1222222 348888999999877 4 59999998
Q ss_pred eC
Q 022213 267 ND 268 (301)
Q Consensus 267 ~~ 268 (301)
++
T Consensus 285 ~~ 286 (474)
T 1wyu_B 285 KA 286 (474)
T ss_dssp CG
T ss_pred cH
Confidence 65
No 186
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.86 E-value=3e-21 Score=176.94 Aligned_cols=214 Identities=14% Similarity=0.136 Sum_probs=146.5
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
.++..+|+|..|.+...-.+ .++.+.+++.++++... .|+ +..++++++++.+.+.++ +.++|++++|+++
T Consensus 49 ~~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~e 119 (424)
T 2e7u_A 49 ADGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGL--TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTE 119 (424)
T ss_dssp TTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCS--CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHH
T ss_pred CCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHH
Confidence 35778999998854321122 57889999999987532 232 234666777777766543 5689999999999
Q ss_pred HHHHHHHH---hcCCCCEEEEcCCCCcchHHHHH-h-------------cCc------eEEEeecCCCCCCCCCHHHHHh
Q 022213 119 AVEVILSV---LARPGANVLLPRPGWPYYEGIAQ-R-------------KQV------EVRHFDLLPERNWEVDLDAVEA 175 (301)
Q Consensus 119 al~~~~~~---l~~~gd~Vl~~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~~~~~l~~ 175 (301)
|++.+++. +. +++.|++.+|+|+++...+. . .|+ .+..++. .|++.|++
T Consensus 120 a~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~ 191 (424)
T 2e7u_A 120 ATMSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLRE 191 (424)
T ss_dssp HHHHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHH
Confidence 99999986 44 45889999999987543221 1 121 2333332 47899998
Q ss_pred hccc--CccEEEEcCCCCC-cccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCc
Q 022213 176 LADK--NTAAMVIINPGNP-CGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS 251 (301)
Q Consensus 176 ~~~~--~~~~v~l~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~S 251 (301)
.+++ +..++++++|+|+ ||.+. +.+++++|.++ ++||+++|+||+|.++ ..+.. .....++...+++ |||
T Consensus 192 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di~---s~s 265 (424)
T 2e7u_A 192 VLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDLV---TLG 265 (424)
T ss_dssp HHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSEE---EEC
T ss_pred HHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcchh---hhh
Confidence 8863 2345667788665 89765 78999999999 9999999999999987 33321 1122222223333 999
Q ss_pred ccCCCCcceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
|.++ +|+|+||+++++ ++++.++.
T Consensus 266 K~l~-~G~~~G~~~~~~--------~~~~~~~~ 289 (424)
T 2e7u_A 266 KILG-GGLPAAAYAGRR--------EIMEKVAP 289 (424)
T ss_dssp GGGG-TTSSCEEEEECH--------HHHTTBTT
T ss_pred hhhh-CCcceEEEEEcH--------HHHhhhcc
Confidence 9988 499999999843 46666554
No 187
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.86 E-value=8.1e-22 Score=181.08 Aligned_cols=237 Identities=14% Similarity=0.050 Sum_probs=152.1
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
.+++.++||..|.... .++ .++.+.+++.+++.......|+. ....+|++.+++++ + ..++|++|+|++
T Consensus 50 ~~g~~ylD~~~~~~~~--~lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~---~~~~v~~~~~Gs 119 (429)
T 3k28_A 50 IDGNEYIDYVLSWGPL--IHGHANDRVVEALKAVAERGTSFGAPT-EIENKLAKLVIERV----P---SIEIVRMVNSGT 119 (429)
T ss_dssp TTCCEEEESCGGGTTC--TTCBSCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHS----T---TCSEEEEESSHH
T ss_pred CCCCEEEECCCChhhc--ccCCCCHHHHHHHHHHHhhCcCcCCCC-HHHHHHHHHHHHhC----C---CCCEEEEeCChH
Confidence 4578899999885421 133 57899999999887644323333 34567777777765 2 468999999999
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHh-cCceEEEeecCCCCCCC------------CCHHHHHhhccc--C
Q 022213 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWE------------VDLDAVEALADK--N 180 (301)
Q Consensus 118 ~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~------------~~~~~l~~~~~~--~ 180 (301)
++++.+++.+.. ++++|++.+|+|+++...... .|.....+......++. .|++.+++.+++ .
T Consensus 120 ea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 199 (429)
T 3k28_A 120 EATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD 199 (429)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC
Confidence 999999988864 678999999999865433222 22221111111111110 178899988863 2
Q ss_pred ccEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCc
Q 022213 181 TAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (301)
Q Consensus 181 ~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G 258 (301)
..++++++| +|++|.+. +.+++++|.++|++||+++|+||+|.++ +.+. ......++...++ .+|||.+++ |
T Consensus 200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~-~~~~~~~~~~~di---~t~sK~~~~-G 273 (429)
T 3k28_A 200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAY-NCGQGYYGVTPDL---TCLGKVIGG-G 273 (429)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSST-THHHHHHTCCCSE---EEECGGGGT-T
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc-chHHHHhCCCCce---ehhhhhhcC-C
Confidence 344555566 44556555 6788999999999999999999999987 5432 1112222222233 378999874 9
Q ss_pred ceeEEEEeeCCCCcccchhHHHHHHhhh----cccCCCccccccc
Q 022213 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL----SIYSDIPTFIQVC 299 (301)
Q Consensus 259 ~rvG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~q~~ 299 (301)
+|+||++++. ++++.++... ....+.++++|.+
T Consensus 274 ~~iG~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aa 310 (429)
T 3k28_A 274 LPVGAYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAA 310 (429)
T ss_dssp SCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHH
T ss_pred CCeEEEEEcH--------HHHhhhccCCCccccCCCCCChHHHHH
Confidence 9999998843 4666664421 1123455565543
No 188
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.86 E-value=4.4e-22 Score=178.14 Aligned_cols=194 Identities=11% Similarity=0.065 Sum_probs=138.1
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC---CCCCCCC---CCC----CHHHHHHHHHHHhhhCCCCCCCCCEE
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---KFNCYAT---NSG----IPPARRAIADYLSRDLPYKLSADDVY 111 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~---~~~~Y~~---~~g----~~~lr~~ia~~l~~~~~~~~~~~~i~ 111 (301)
+.+++++.|. .++|+.+.+++.+.+... ....|.. ..+ ..++++.+++++ +.. ++++|+
T Consensus 2 ~~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~v~ 70 (360)
T 1w23_A 2 KQVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL----QIP-NDYQIL 70 (360)
T ss_dssp CCCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH----TCC-TTEEEE
T ss_pred CceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEE
Confidence 3578888885 256788999988877531 0111211 122 234555555555 432 357999
Q ss_pred EcCCH-HHHHHHHHHHhcCC---CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHh-hcccCccEEEE
Q 022213 112 VTLGC-KQAVEVILSVLARP---GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVI 186 (301)
Q Consensus 112 ~t~g~-~~al~~~~~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~l 186 (301)
+|+|+ ++++..++.+++.+ ||.|+++.++|..+ ..++..| +++.+++++++++ +|++++++ .++++++++++
T Consensus 71 ~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~~-~d~~~l~~~~i~~~~k~v~~ 147 (360)
T 1w23_A 71 FLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANSY-QSIPDFSEFQLNENDAYLHI 147 (360)
T ss_dssp EESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGTS-CSCCCGGGCCCCTTEEEEEE
T ss_pred EECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccCc-CCccchHhhccCCCCCEEEE
Confidence 99999 99999999999865 56677776666543 3456789 9999998643333 78889988 88778999999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEe
Q 022213 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (301)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~ 266 (301)
++|+||||.+++ ++. ++||+++|+|++|+.+.. +.++..+ .++++|+||.++.+| +||+++
T Consensus 148 ~~~~nptG~~~~--~i~------~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~ 208 (360)
T 1w23_A 148 TSNNTIYGTQYQ--NFP------EINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIV 208 (360)
T ss_dssp ESEETTTTEECS--SCC------CCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEE
T ss_pred eCCCCCcceecc--ccc------ccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEE
Confidence 999999999987 222 389999999999987442 2233333 188999999998666 999998
Q ss_pred eC
Q 022213 267 ND 268 (301)
Q Consensus 267 ~~ 268 (301)
++
T Consensus 209 ~~ 210 (360)
T 1w23_A 209 KK 210 (360)
T ss_dssp EH
T ss_pred cH
Confidence 64
No 189
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.85 E-value=2.7e-21 Score=177.38 Aligned_cols=215 Identities=16% Similarity=0.111 Sum_probs=145.6
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
.+++.++||..|.+.. + +. .++.+.+++.++++... .|.. ..+++.++++++.+.++ ++++|++|+|++
T Consensus 49 ~~g~~~lD~~~~~~~~-~-lG~~~p~v~~a~~~~~~~~~--~~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggs 118 (427)
T 3fq8_A 49 VDGNRYIDYVGTWGPA-I-CGHAHPEVIEALKVAMEKGT--SFGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGT 118 (427)
T ss_dssp TTSCEEEESSGGGTTC-T-TCBTCHHHHHHHHHHHTTCS--CCSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHH
T ss_pred CCCCEEEECCCchhhh-c-cCCCCHHHHHHHHHHHHhCC--CcCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHH
Confidence 3578899999885432 1 32 57899999999887543 2332 34677777777776554 578999999999
Q ss_pred HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhc-Cce-------------------EEEeecCCCCCCCCCHHHHHh
Q 022213 118 QAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRK-QVE-------------------VRHFDLLPERNWEVDLDAVEA 175 (301)
Q Consensus 118 ~al~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~~-------------------~~~~~~~~~~~~~~~~~~l~~ 175 (301)
++++.+++... ..+++|++.+|+|+++....... +.. +..++. .|++.|++
T Consensus 119 ea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 191 (427)
T 3fq8_A 119 EACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKA 191 (427)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHH
Confidence 99999995442 24589999999998653322221 111 122221 18899999
Q ss_pred hccc---CccEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCc
Q 022213 176 LADK---NTAAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS 251 (301)
Q Consensus 176 ~~~~---~~~~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~S 251 (301)
.+++ +++++++..++|++|.+.+ .+.+++|.++|++||+++|+||+|.++ +.+.. .....++...+ +.|+|
T Consensus 192 ~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~s 266 (427)
T 3fq8_A 192 LFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPD---LTTLG 266 (427)
T ss_dssp HHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCS---EEEEC
T ss_pred HHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCC---hhhhh
Confidence 8865 4455555555677787666 566999999999999999999999987 44322 11222222223 34889
Q ss_pred ccCCCCcceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
|.++ +|+|+||++++. ++++.++.
T Consensus 267 K~~~-~G~~~G~~~~~~--------~~~~~~~~ 290 (427)
T 3fq8_A 267 KIIG-GGLPVGAYGGKR--------EIMQLVAP 290 (427)
T ss_dssp GGGG-TTSSCEEEEECH--------HHHTTBTT
T ss_pred hhhh-CCcceEEEEEcH--------HHHHhhcc
Confidence 9988 799999998733 46666654
No 190
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.85 E-value=2.9e-21 Score=177.58 Aligned_cols=206 Identities=14% Similarity=0.077 Sum_probs=139.0
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
.+++.+|+|+.|.+.....+ .++.+.+++.++++......| ..++++++++.+.+..+ ..++|++|+|+++
T Consensus 53 ~~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~la~~~~---~~~~v~~~~sgse 123 (434)
T 2epj_A 53 VDGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGA-----PGEAEVLLAEKILGYVK---RGGMIRFVNSGTE 123 (434)
T ss_dssp TTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHHC---TTCEEEEESSHHH
T ss_pred CCCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHH
Confidence 35778999998864321122 578899999999875322222 23445555555544332 4689999999999
Q ss_pred HHHHHHHH---hcCCCCEEEEcCCCCcchHHHHH--------------hcCc------eEEEeecCCCCCCCCCHHHHHh
Q 022213 119 AVEVILSV---LARPGANVLLPRPGWPYYEGIAQ--------------RKQV------EVRHFDLLPERNWEVDLDAVEA 175 (301)
Q Consensus 119 al~~~~~~---l~~~gd~Vl~~~p~~~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~~~~~l~~ 175 (301)
|++.+++. +. +++.|++.+|+|+++...+. ..|+ .+..++. .|++.|++
T Consensus 124 A~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~ 195 (434)
T 2epj_A 124 ATMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALER 195 (434)
T ss_dssp HHHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHH
T ss_pred HHHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHH
Confidence 99999987 44 46788888999987533221 1122 2333432 37899998
Q ss_pred hccc--CccEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCc
Q 022213 176 LADK--NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS 251 (301)
Q Consensus 176 ~~~~--~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~S 251 (301)
.+++ ...++++++| +|+||.+. +.+.+++|.++|++||+++|+||+|..+ ..+. ...+..++...++ .|||
T Consensus 196 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~di---~s~s 270 (434)
T 2epj_A 196 VFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL-EGAQGYFNIEGDI---IVLG 270 (434)
T ss_dssp HHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST-THHHHHHTCCCSE---EEEE
T ss_pred HHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc-chhhHHhCCCCCe---eeec
Confidence 8864 2334555666 56799876 6999999999999999999999999976 3232 1112222222233 3899
Q ss_pred ccCCCCcceeEEEEee
Q 022213 252 KRWLVPGWRFGWLVTN 267 (301)
Q Consensus 252 K~~~~~G~rvG~~~~~ 267 (301)
|.++. |+|+||++++
T Consensus 271 K~l~~-G~~~G~v~~~ 285 (434)
T 2epj_A 271 KIIGG-GFPVGAVAGS 285 (434)
T ss_dssp GGGGT-TSSCEEEEEC
T ss_pred chhcC-Ccceeeeeec
Confidence 99886 9999999984
No 191
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.85 E-value=2.1e-20 Score=172.03 Aligned_cols=195 Identities=21% Similarity=0.223 Sum_probs=150.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
++++|+|+..+ ..+.+.+++.+++... .|.+..+..++|+++++++.. +++++++++++++
T Consensus 30 ~~~~i~~~~~~--------~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~g~--------~~~i~~~sGt~a~ 90 (437)
T 3bb8_A 30 GKSVVPPSGKV--------IGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYLGV--------PYVLTTTSGSSAN 90 (437)
T ss_dssp TTSCBCSCCCC--------CCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHHTC--------SEEEEESCHHHHH
T ss_pred CCccccCCCCC--------CCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHHCC--------CcEEEeCCHHHHH
Confidence 44466764332 2357778888877642 355556789999999999932 2678888889999
Q ss_pred HHHHHHh---------cCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCC
Q 022213 121 EVILSVL---------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGN 191 (301)
Q Consensus 121 ~~~~~~l---------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~n 191 (301)
..++.++ +++||+|+++.|+|.++...++..|.+++.++++++ ++.+|++.+++.++++++++++++
T Consensus 91 ~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~--- 166 (437)
T 3bb8_A 91 LLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIP-TYNVNASLIEAAVSDKTKAIMIAH--- 166 (437)
T ss_dssp HHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETT-TTEECGGGHHHHCCTTEEEEEEEC---
T ss_pred HHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCc-cCCcCHHHHHHhcCCCCeEEEEeC---
Confidence 9999998 789999999999999999999999999999987542 567899999999988888888874
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccc-cCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~-~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
++|...+ +++|.++|+++|+++|+|++|.... ++.. .+..+ .+ +++.||+|.++++|.|.|++++++
T Consensus 167 ~~g~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~---~d-~~~~s~~~~k~l~~g~gg~~~~~~ 234 (437)
T 3bb8_A 167 TLGNLFD---LAEVRRVADKYNLWLIEDCCDALGSTYDGK---MAGTF---GD-IGTVSFYPAKHITMGEGGAVFTQS 234 (437)
T ss_dssp GGGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSS---SS-EEEEECSTTSSSCCSSCEEEEESC
T ss_pred CCCChhc---HHHHHHHHHHcCCEEEEECccccCceECCe---ecccc---cC-EEEEECcCCcCCCCCCeEEEEeCC
Confidence 2344455 8889999999999999999998532 2211 11111 12 777899998889999999999854
No 192
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.85 E-value=2.4e-21 Score=179.49 Aligned_cols=226 Identities=16% Similarity=0.100 Sum_probs=150.5
Q ss_pred CCC--CeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 40 DPR--PVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 40 ~~~--~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
+++ .+|||..|.... .++ .++.+.+++.++++... .+....+..+.+.++++.+.+..+ .+.++|++|+|+
T Consensus 71 dG~~~~ylD~~s~~~~~--~lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~L~e~la~~~~--~~~~~v~~~~sG 144 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTA--IHGHGHPALDQALTTQLRVMN--HVMFGGLTHEPAARLAKLLVDITP--AGLDTVFFSDSG 144 (457)
T ss_dssp TTEEEEEEETTHHHHTC--TTCBTCHHHHHHHHHHHHHCS--CCCSSSEECHHHHHHHHHHHHHSS--TTEEEEEEESSH
T ss_pred CCCeeEEEECCCcHhhh--ccCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCcH
Confidence 577 889998873211 122 56889999998887532 121111223444445555444333 456799999999
Q ss_pred HHHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhcC--------------ceEEEeecCCCCCCCCCHHHHH
Q 022213 117 KQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQ--------------VEVRHFDLLPERNWEVDLDAVE 174 (301)
Q Consensus 117 ~~al~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~~~~~~~l~ 174 (301)
++|++.+++.+.. +| ++|++.+++|+++.......+ .....++.........|++.|+
T Consensus 145 seA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le 224 (457)
T 3tfu_A 145 SVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFE 224 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHH
Confidence 9999999998875 55 589999999987644443331 1233333322211124788898
Q ss_pred hhcc---cCccEEEEcC-CCCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEec
Q 022213 175 ALAD---KNTAAMVIIN-PGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (301)
Q Consensus 175 ~~~~---~~~~~v~l~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s 249 (301)
+.++ ++++++++.. ++|++|.++ +.+.+++|.++|++||+++|+||+|.++.+.+.. ..+..++...+++ |
T Consensus 225 ~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~-~a~~~~~~~pdii---t 300 (457)
T 3tfu_A 225 AQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGAL-FAADHAGVSPDIM---C 300 (457)
T ss_dssp HHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCSEE---E
T ss_pred HHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccch-hHhHhcCCCceEE---E
Confidence 8886 4556666666 689999876 7788999999999999999999999987665532 2333333334445 8
Q ss_pred CcccCCCCcceeEEEEeeCCCCcccchhHHHHHH
Q 022213 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK 283 (301)
Q Consensus 250 ~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~ 283 (301)
|||.++...+|+||++++. ++++.+.
T Consensus 301 ~sK~l~gG~~~lG~v~~~~--------~i~~~~~ 326 (457)
T 3tfu_A 301 VGKALTGGYLSLAATLCTA--------DVAHTIS 326 (457)
T ss_dssp ECGGGGTTSSCCEEEEEEH--------HHHHHHH
T ss_pred EChhhhCCCcceEEEEEcH--------HHHHHhh
Confidence 9998654337999999853 5777775
No 193
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.85 E-value=1.5e-20 Score=174.47 Aligned_cols=206 Identities=8% Similarity=0.022 Sum_probs=144.0
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhc----CC---CCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEc
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----GK---FNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~----~~---~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (301)
+++|.|+.+... +.|+.+.+++.+.+.. +. ...|.+ ..-...+++.+++++ +.++++|++|
T Consensus 66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t 134 (465)
T 3e9k_A 66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALM 134 (465)
T ss_dssp CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEEC
T ss_pred CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEE
Confidence 467888777543 2233444444443321 11 111211 123366888888887 4568899999
Q ss_pred CCHHHHHHHHHHHhcCCCC---EEEEcCCCCcch----HHHHHhcCceEEE--eecC-CCCCCCCCHHHHHhhcc---cC
Q 022213 114 LGCKQAVEVILSVLARPGA---NVLLPRPGWPYY----EGIAQRKQVEVRH--FDLL-PERNWEVDLDAVEALAD---KN 180 (301)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd---~Vl~~~p~~~~~----~~~~~~~g~~~~~--~~~~-~~~~~~~~~~~l~~~~~---~~ 180 (301)
+|++++++.++.++.++|| +|+++.|+|++. ...++..|.++.. +.+. .++++.+|++++++.++ ++
T Consensus 135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~ 214 (465)
T 3e9k_A 135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS 214 (465)
T ss_dssp SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence 9999999999999987655 599999999874 3366678887532 1111 23456689999999986 56
Q ss_pred ccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcce
Q 022213 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (301)
Q Consensus 181 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~r 260 (301)
++++++++|+||||.+++ +++|.++|+++|+++|+|++++... .+..+..++. .++++|++|.++....+
T Consensus 215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~----~~~~~~~~~~---D~~~~s~~K~l~~gp~~ 284 (465)
T 3e9k_A 215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGN----VELYLHDWGV---DFACWCSYKYLNAGAGG 284 (465)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHHTC---CEEEECSSSTTCCCTTC
T ss_pred eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCC----cCCchhhcCC---CEEEECcccccccCCCc
Confidence 888999999999999999 7888899999999999999988522 2222322222 38899999997433337
Q ss_pred eEEEEeeC
Q 022213 261 FGWLVTND 268 (301)
Q Consensus 261 vG~~~~~~ 268 (301)
+|+++++.
T Consensus 285 ~g~l~~~~ 292 (465)
T 3e9k_A 285 IAGAFIHE 292 (465)
T ss_dssp CCEEEECG
T ss_pred eEEEEEcH
Confidence 89998754
No 194
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.85 E-value=2.7e-21 Score=173.01 Aligned_cols=182 Identities=15% Similarity=0.126 Sum_probs=132.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCC--EEEEcCCCCcchHH---HHHhcC
Q 022213 78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYEG---IAQRKQ 152 (301)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd--~Vl~~~p~~~~~~~---~~~~~g 152 (301)
..|++..+..+|++++++++. . +..++++|+++++..++++++++|| .|+++.++|..... .....|
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~------~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g 112 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG------M--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP 112 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred ccccCChHHHHHHHHHHHHhC------C--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence 357776688999999999983 2 3345557888999999999998888 67776666553322 345668
Q ss_pred ceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCeEEEccCCccc--ccCC
Q 022213 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHL--TFGS 229 (301)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~--~~~~ 229 (301)
.+++.++. +++.+|++++++.. +++++++++|+||| |.+++.+++++|+++|++||+++|+|++|... .+.+
T Consensus 113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 88887763 34569999999874 38899999999998 99999999999999999999999999998721 1112
Q ss_pred CCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhhh
Q 022213 230 IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 230 ~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
.....+. ...+ +++.|+||+++.++. ||++++ ++++++++...
T Consensus 188 ~~~~~~~---~~~d-~~~~s~sK~~~~~~g--g~~~~~--------~~~~~~~~~~~ 230 (357)
T 3lws_A 188 KTAAEIA---GLFD-SIYISFYKGLGGIAG--AILAGP--------AAFCQTARIWK 230 (357)
T ss_dssp CCHHHHH---TTSS-EEEEESSSTTCCSSC--EEEEEC--------HHHHHHHHHHH
T ss_pred CChHHHH---hcCC-EEEEeccccCCCCce--EEEEcC--------HHHHHHHHHHH
Confidence 1111111 1112 447899999844432 998873 25777776543
No 195
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.85 E-value=8e-21 Score=176.84 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=155.8
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
.+++.+|||..|.... .++ .++.+.+++.++++... .|....+..+.+.++++++.+..+ .+.++|++++|++
T Consensus 51 ~~G~~ylD~~s~~~~~--~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGs 124 (476)
T 3i5t_A 51 EDGRRLIDGPAGMWCA--QVGYGRREIVDAMAHQAMVLP--YASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGS 124 (476)
T ss_dssp TTCCEEEETTHHHHTC--TTCBCCHHHHHHHHHHHHHCC--CCCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHH
T ss_pred CCCCEEEECCCchhhc--cCCCCCHHHHHHHHHHHHhcc--CcccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchH
Confidence 4578899998883211 122 47889999999887532 122224567889999999988654 3456999999999
Q ss_pred HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhcCce-------------EEEeecCCC-CCCCCC------
Q 022213 118 QAVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPE-RNWEVD------ 169 (301)
Q Consensus 118 ~al~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~-~~~~~~------ 169 (301)
+|++.+++.+.. .+++|++.+|+|+++.......+.. ...++.... ..+..+
T Consensus 125 eA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (476)
T 3i5t_A 125 TAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLD 204 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHH
Confidence 999999999863 3579999999999875544433221 222221110 001122
Q ss_pred --HHHHHhhcc----cCccEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcc-ccCCC
Q 022213 170 --LDAVEALAD----KNTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-LFGSI 241 (301)
Q Consensus 170 --~~~l~~~~~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~-~~~~~ 241 (301)
++.|++.++ +++.++++..++|++|. +.+.+.+++|.++|++||+++|+||+|..+.+.+.. ..+. .++-.
T Consensus 205 ~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~-~~~~~~~~v~ 283 (476)
T 3i5t_A 205 DLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEW-FASEKVFGVV 283 (476)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCc-eeeecccCCC
Confidence 678888775 23455555556777885 788899999999999999999999999987665542 2233 33333
Q ss_pred CCEEEEecCcccCCCCc-ceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G-~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
.+++ ++||.++. | +|+|+++++. ++++.+..
T Consensus 284 pdi~---t~sK~l~~-G~~plg~v~~~~--------~i~~~~~~ 315 (476)
T 3i5t_A 284 PDII---TFAKGVTS-GYVPLGGLAISE--------AVLARISG 315 (476)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEECH--------HHHHTTSG
T ss_pred cchh---hhhhhhcC-CCcCeEEEEECH--------HHHHHHhc
Confidence 3444 68999774 8 9999999843 47777765
No 196
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.85 E-value=2.9e-20 Score=170.48 Aligned_cols=157 Identities=20% Similarity=0.195 Sum_probs=128.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEe-ec
Q 022213 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHF-DL 160 (301)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~-~~ 160 (301)
..++++.+++++.. + ..++++++++|+..++.+++++||+|+++.+.|.++...+ +..|++++++ +.
T Consensus 60 ~~~l~~~la~~~g~------~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 131 (421)
T 2ctz_A 60 VDVLEKRLAALEGG------K--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE 131 (421)
T ss_dssp HHHHHHHHHHHHTC------S--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred HHHHHHHHHHHhCC------C--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 47899999999832 2 3455555699999999999999999999999999876554 6789999888 65
Q ss_pred CCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCC-cccccCCCCCCCccccC
Q 022213 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY-GHLTFGSIPYTPMGLFG 239 (301)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y-~~~~~~~~~~~~~~~~~ 239 (301)
.|++++++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++| +.. +... ++ .+.
T Consensus 132 -------~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~~ 196 (421)
T 2ctz_A 132 -------ERPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AWG 196 (421)
T ss_dssp -------CCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GGT
T ss_pred -------CCHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-ccC
Confidence 2789999999888999999999999999999 889999999999999999999 542 2221 12 122
Q ss_pred CCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 240 SIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
..+++.|+||.++.+|.|+|++++.+
T Consensus 197 ---~Di~~~s~~K~l~~~g~~~G~~~~~~ 222 (421)
T 2ctz_A 197 ---AALVTHSLTKWVGGHGAVIAGAIVDG 222 (421)
T ss_dssp ---CSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred ---CeEEEECCcccccCCCCcEEEEEEec
Confidence 23899999999999999999998863
No 197
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.85 E-value=1.3e-20 Score=171.57 Aligned_cols=169 Identities=17% Similarity=0.164 Sum_probs=131.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-----HhcCceEEEeec
Q 022213 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA-----QRKQVEVRHFDL 160 (301)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~~~~ 160 (301)
..+|++.++++. ..+++++++++++|+.. +..++++||+|+++.|.|.+....+ ...|+++++++.
T Consensus 69 ~~~l~~~la~l~--------g~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 139 (400)
T 3nmy_A 69 RFAYERCVAALE--------GGTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDL 139 (400)
T ss_dssp HHHHHHHHHHHH--------TCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECT
T ss_pred HHHHHHHHHHHh--------CCCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECC
Confidence 456778888876 23467778888999998 5678899999999999999655443 345999998876
Q ss_pred CCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC
Q 022213 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (301)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~ 240 (301)
.|++.++++++++++++++++|+||||.+.+ +++|+++|++||+++|+|++|....+.. ++. +
T Consensus 140 -------~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~~-~-- 202 (400)
T 3nmy_A 140 -------TDPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR----PLS-L-- 202 (400)
T ss_dssp -------TSHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----GGG-G--
T ss_pred -------CCHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC----hhh-c--
Confidence 2889999999888999999999999999998 8899999999999999999998644321 111 1
Q ss_pred CCCEEEEecCcccCCCCcceeEE-EEeeCCCCcccchhHHHHHHhhhc
Q 022213 241 IVPVITLGSISKRWLVPGWRFGW-LVTNDPNGIFQKSGIIDSIKDCLS 287 (301)
Q Consensus 241 ~~~vi~~~s~SK~~~~~G~rvG~-~~~~~~~~~~~~~~~~~~~~~~~~ 287 (301)
+..+++.|+||.++.+|.++|+ +++... ++++++++....
T Consensus 203 -g~div~~S~sK~l~g~g~~~gG~~vv~~~------~~~~~~l~~~~~ 243 (400)
T 3nmy_A 203 -GADLVVHSATKYLNGHSDMVGGIAVVGDN------AELAEQMAFLQN 243 (400)
T ss_dssp -TCSEEEEETTTTTTCSSSCCCEEEEECSC------HHHHHHHHHHHH
T ss_pred -CCcEEEecCccccCCCCCcceeEEEEeCC------HHHHHHHHHHHH
Confidence 2238999999999999999877 444332 357777766543
No 198
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.85 E-value=1.9e-21 Score=181.30 Aligned_cols=208 Identities=12% Similarity=0.047 Sum_probs=148.4
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCC--CCEEEc
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIADYLSRDLPYKLSA--DDVYVT 113 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~t 113 (301)
.+.|+|..+++ ++++.+.+++.+.+.+.-... |+...+..++++.+.+++.+.+|...+. .+|+++
T Consensus 44 ~~~i~L~a~e~------~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~ 117 (483)
T 1rv3_A 44 RVGLELIASEN------FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY 117 (483)
T ss_dssp HSSEECCTTCC------CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred hcCeEEEcCCC------CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence 46899977752 357888899888776421111 2222334677877777777777654221 248888
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcC--ceEEEeecCCCCCCCCCHHHHHhhcc-cCcc
Q 022213 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEG--------IAQRKQ--VEVRHFDLLPERNWEVDLDAVEALAD-KNTA 182 (301)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 182 (301)
+|+ +++..++.++++|||+|+++++.|.++.. .+...| ...+.+++++ .++.+|+++|++.++ .+++
T Consensus 118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk 195 (483)
T 1rv3_A 118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK 195 (483)
T ss_dssp SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence 887 89988899999999999999998886642 122333 3444444443 357799999999998 6899
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCc-ccccCCCCCCCccccCCCCCEEEEecCcccCCCCccee
Q 022213 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF 261 (301)
Q Consensus 183 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rv 261 (301)
+|++ +++|++ .+++ +++|.++|+++|+++|+|++|. .+.+.+....++. . ..+++.|+||++ .|.|.
T Consensus 196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~---~div~~s~~K~l--~Gprg 263 (483)
T 1rv3_A 196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H---CHVVTTTTHKTL--RGCRA 263 (483)
T ss_dssp EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T---CSEEEEESSGGG--CCCSC
T ss_pred EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C---CcEEEecCcccC--CCCCc
Confidence 9888 999988 8888 8888999999999999999986 3333333333332 1 128889999985 68889
Q ss_pred EEEEeeCC
Q 022213 262 GWLVTNDP 269 (301)
Q Consensus 262 G~~~~~~~ 269 (301)
||+++++.
T Consensus 264 G~i~~~~~ 271 (483)
T 1rv3_A 264 GMIFYRRG 271 (483)
T ss_dssp EEEEEECS
T ss_pred eEEEEcch
Confidence 99998764
No 199
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.85 E-value=4e-21 Score=172.24 Aligned_cols=194 Identities=10% Similarity=0.028 Sum_probs=137.2
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-C-EEE
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRAIADYLSRDLPYKLSAD-D-VYV 112 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~-i~~ 112 (301)
.++.++.|. .++|+.+.+++.+.+.+.. ..+|.+ +..++++++.+.+.+.+|. +++ + +++
T Consensus 4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~~i~~ 73 (362)
T 2c0r_A 4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGN--PTGYKVLFI 73 (362)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence 467776663 5678899999988775310 111211 2345667777777666663 443 5 578
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhcCceEEEeecCCC--CCCCCCHHHHHhhcccCccEEEEcC
Q 022213 113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPE--RNWEVDLDAVEALADKNTAAMVIIN 188 (301)
Q Consensus 113 t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~l~~ 188 (301)
|+|+++++..++.+++++||+|+++.+.+... ...++..| +++.+++..+ .+..++.++++ ++++++++++++
T Consensus 74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~ 150 (362)
T 2c0r_A 74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS 150 (362)
T ss_dssp SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence 89999999999999999999999887765442 35667789 9999987532 23334665553 566889999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
|+||||..++ ++++| +|+++|+|++|..... +..+..+ .+++.|+||+++.+| +||++++.
T Consensus 151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~----~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~ 211 (362)
T 2c0r_A 151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR----PFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE 211 (362)
T ss_dssp EETTTTEECS--SCCCC------TTSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred CcCccceecc--ccccc------CCCEEEEEChhhccCC----ccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence 9999999744 25554 7999999999986432 2223322 277889999999888 99999865
No 200
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.84 E-value=1.8e-20 Score=174.27 Aligned_cols=245 Identities=13% Similarity=0.054 Sum_probs=160.1
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 38 ~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
..+++.+|||..|.... +--..++.+.+++.++++.... .|....+..+.+.++++.+.+..+ .+.++|++++|++
T Consensus 51 d~~G~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGs 126 (472)
T 3hmu_A 51 DSEGEEILDAMAGLWCV-NIGYGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGS 126 (472)
T ss_dssp ETTCCEEECTTHHHHTC-TTCBCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHH
T ss_pred ECCCCEEEECCCchhhc-cCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHH
Confidence 34578899998872211 1112468899999998875332 233333445667777777766543 3567999999999
Q ss_pred HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhcCc------------eEEEeecCC--C-CCCCCC-----
Q 022213 118 QAVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV------------EVRHFDLLP--E-RNWEVD----- 169 (301)
Q Consensus 118 ~al~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~~----- 169 (301)
+|++.+++.+.. ++++|++.+++|+++.......+. .+..++... . ..+ .+
T Consensus 127 eA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~ 205 (472)
T 3hmu_A 127 EANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFG 205 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHH
Confidence 999999999875 468999999999987544443332 233444211 0 111 23
Q ss_pred ---HHHHHhhccc---CccEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCC
Q 022213 170 ---LDAVEALADK---NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (301)
Q Consensus 170 ---~~~l~~~~~~---~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~ 241 (301)
++.|++.+++ ...+++++.| ++++|.+. +.+.+++|.++|++||+++|+||+|..+.+.+.. .....++..
T Consensus 206 ~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~-~a~~~~~v~ 284 (472)
T 3hmu_A 206 LARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNW-FGTQTMGIR 284 (472)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCcc-chhHHhCCC
Confidence 6778877752 2334455555 66677655 8889999999999999999999999987665532 222333333
Q ss_pred CCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhh--hc-ccCCCccccccc
Q 022213 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--LS-IYSDIPTFIQVC 299 (301)
Q Consensus 242 ~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~q~~ 299 (301)
.+++ +|||+++..|+|+||++++. ++++.+... .. ...+.++++|.|
T Consensus 285 pdi~---t~sK~l~gg~~plG~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aA 334 (472)
T 3hmu_A 285 PHIM---TIAKGLSSGYAPIGGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAV 334 (472)
T ss_dssp CSEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHH
T ss_pred Ccee---eechhhhcCCcceEEEEECH--------HHHHhcccCCccccCCCCCCHHHHHH
Confidence 3444 68999877779999999843 577777321 11 123455666554
No 201
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.84 E-value=1.6e-20 Score=171.53 Aligned_cols=215 Identities=17% Similarity=0.135 Sum_probs=132.9
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCC-----CCCCCHHHHHHHH-HHHhhhCCCCCCCCCEEEcCCH
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA-----TNSGIPPARRAIA-DYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~-----~~~g~~~lr~~ia-~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
+.++|..+.. +.++.+.+++.+++...-...|+ ......+.+++++ +.+.+..+ .+. ..++++|+
T Consensus 33 ~~i~l~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~-~~v~~~~G 103 (425)
T 3ecd_A 33 SQVELIASEN------IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN--AGH-ANVQPHSG 103 (425)
T ss_dssp HSEECCTTCC------CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT--CSE-EECCCSSH
T ss_pred cceeeecccC------CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC--CCC-ceeecCch
Confidence 5688866642 12788889988877432111121 1111111333333 33333222 222 23458889
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcc---hHHHHHhcCc--eEEEeecCCCCCCCCCHHHHHhhcc-cCccEEEEcCCC
Q 022213 117 KQAVEVILSVLARPGANVLLPRPGWPY---YEGIAQRKQV--EVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPG 190 (301)
Q Consensus 117 ~~al~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~ 190 (301)
++++..++.+++++||+|+++.|+|.+ +.......|. +.+.++..+ +++.+|++.+++.++ .+++++++++|+
T Consensus 104 s~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 182 (425)
T 3ecd_A 104 AQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGFSA 182 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEECSC
T ss_pred HHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEcccc
Confidence 999999999999999999999999987 3322223444 445555432 356799999999986 478999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEccCCc-ccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
||+ ..+ +++|.++|++||+++|+|++|. .+.+.+..+..+... .+++.|+||++ +|.|+||++++++
T Consensus 183 ~~~--~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~-----di~~~s~sK~l--~g~~~g~~~~~~~ 250 (425)
T 3ecd_A 183 YPR--KLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHA-----HVVTSTTHKTL--RGPRGGFVLTNDE 250 (425)
T ss_dssp CCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC-----SEEEEESSGGG--CCCSCEEEEESCH
T ss_pred CCC--cCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcC-----cEEEecCCccc--CCCCcEEEEeCCH
Confidence 964 444 7899999999999999999954 334444333333221 18899999996 6789999998542
Q ss_pred CCcccchhHHHHHHhhh
Q 022213 270 NGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 270 ~~~~~~~~~~~~~~~~~ 286 (301)
++...++...
T Consensus 251 -------~~~~~~~~~~ 260 (425)
T 3ecd_A 251 -------EIAKKINSAV 260 (425)
T ss_dssp -------HHHHHHHHHH
T ss_pred -------HHHHHHHhhh
Confidence 3666665543
No 202
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.84 E-value=7.6e-21 Score=174.53 Aligned_cols=223 Identities=12% Similarity=0.073 Sum_probs=138.8
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
.+++.++||..|.... +.-..++.+.+++.++++......|+. +.+.++++.+.+..+ ..++|++|+|+++
T Consensus 50 ~~g~~ylD~~~~~~~~-~lG~~~p~v~~A~~~~~~~~~~~~~~~-----~~~~~la~~l~~~~~---~~~~v~~~~sGse 120 (429)
T 4e77_A 50 VDGKAYIDYVGSWGPM-ILGHNHPAIRQAVIEAVERGLSFGAPT-----EMEVKMAQLVTDLVP---TMDMVRMVNSGTE 120 (429)
T ss_dssp TTCCEEEESSGGGTTC-TTCBTCHHHHHHHHHHHTTCSCCSSCC-----HHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred CCCCEEEECCCchhcc-ccCCCCHHHHHHHHHHHHhCcccCCCC-----HHHHHHHHHHHhhCC---CCCEEEEeCcHHH
Confidence 3578899998885421 111257889999999987543222322 444445555444333 4789999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHH-hcCceEEEeecCCCCCC------------CCCHHHHHhhccc--Cc
Q 022213 119 AVEVILSVLA--RPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNW------------EVDLDAVEALADK--NT 181 (301)
Q Consensus 119 al~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~------------~~~~~~l~~~~~~--~~ 181 (301)
+++.+++... ..++.|++.+++|+++..... ..+.....+......+. ..|++.+++.+++ ..
T Consensus 121 a~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (429)
T 4e77_A 121 ATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQE 200 (429)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCC
Confidence 9999998654 356899999999987643211 11111000000000000 0278999988864 34
Q ss_pred cEEEEcCCCCCcccCC--CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcc
Q 022213 182 AAMVIINPGNPCGNVF--TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259 (301)
Q Consensus 182 ~~v~l~~p~nptG~~~--~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~ 259 (301)
.++++++|+|++|... +.+.+++|.++|++||+++|+||+|.++ ..+. ......++...++ .|+||.++ +|+
T Consensus 201 ~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~-~~~~~~~~~~pdi---~t~sK~~~-~G~ 274 (429)
T 4e77_A 201 VACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL-AGAQDYYHVIPDL---TCLGKIIG-GGM 274 (429)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT-TCHHHHTTCCCSE---EEEEGGGG-TTS
T ss_pred EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc-chHHHhcCCCCCe---eeeccccc-CCC
Confidence 4567788876655333 3556999999999999999999999987 4432 2222233322333 38999987 799
Q ss_pred eeEEEEeeCCCCcccchhHHHHHHh
Q 022213 260 RFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 260 rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
|+||++++. ++++.++.
T Consensus 275 ~~G~~~~~~--------~~~~~l~~ 291 (429)
T 4e77_A 275 PVGAFGGRR--------EVMNALAP 291 (429)
T ss_dssp CCEEEEECH--------HHHTTBTT
T ss_pred CeEEEEECH--------HHHHHhcc
Confidence 999998743 46666654
No 203
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.83 E-value=2.7e-19 Score=167.56 Aligned_cols=202 Identities=13% Similarity=0.086 Sum_probs=154.2
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEE---EcCCHHHHHHHHHHHhcCC-----
Q 022213 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVY---VTLGCKQAVEVILSVLARP----- 130 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~---~t~g~~~al~~~~~~l~~~----- 130 (301)
.+++.+.+++.+.+.... ..|....+..++++.+.+++.+.+|...++++++ +|+|+++++..++.++..+
T Consensus 67 ~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~ 145 (502)
T 3hbx_A 67 WMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (502)
T ss_dssp CCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence 345678888887765422 2343334567788888888888777654455554 4999999999999888655
Q ss_pred ---CC-----EEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHH
Q 022213 131 ---GA-----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL 202 (301)
Q Consensus 131 ---gd-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l 202 (301)
|| .|+++.++|..+...++..|++++.++++. +++.+|++++++++++++++|++++|+||||.+.+ +
T Consensus 146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l 221 (502)
T 3hbx_A 146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDENTICVAAILGSTLNGEFED---V 221 (502)
T ss_dssp HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---H
T ss_pred HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC---H
Confidence 77 999999999999999999999999998754 34779999999999988999999999999999999 7
Q ss_pred HHHHHHHHhC------CCeEEEccCCccccc---CCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 203 QEIAEMARKL------RVMVVADEVYGHLTF---GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 203 ~~i~~~~~~~------~~~ii~D~~y~~~~~---~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
++|.++|+++ |+++++|++|+.+.. .+.....+. ...-.++..|.+|. ++.+.++||+++.+.
T Consensus 222 ~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~ 293 (502)
T 3hbx_A 222 KLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKY-GLVYAGIGWVIWRNK 293 (502)
T ss_dssp HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTT-TCCCSSCEEEEESSG
T ss_pred HHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC---CCCceEEEECcccc-cCCCCCeEEEEEeCH
Confidence 7888888888 999999999986541 222111111 11112667789997 667788999988654
No 204
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.83 E-value=5.6e-19 Score=165.51 Aligned_cols=195 Identities=9% Similarity=-0.017 Sum_probs=147.2
Q ss_pred HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcC--------CC-----C
Q 022213 66 DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--------PG-----A 132 (301)
Q Consensus 66 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--------~g-----d 132 (301)
+.+...+. .....|....+..++++++.+++.+.+|.+.+.+++++|+|+|+++..++.++.+ +| +
T Consensus 111 ~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~ 189 (504)
T 2okj_A 111 EWLTSTAN-TNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK 189 (504)
T ss_dssp HHHHHHHC-CBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred HHHHHhhc-cCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence 44444443 2223566555566778888777777666443367899999999999999998853 56 6
Q ss_pred -EEEEcCCCCcchHHHHHhcCc---eEEEeecCCCCCCCCCHHHHHhhccc------CccEEEEcCCCCCcccCCCHHHH
Q 022213 133 -NVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHL 202 (301)
Q Consensus 133 -~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l 202 (301)
.|+++.+.|.++...++..|. +++.++++ .++.+|++.|++.+++ ++++|++++|+||||.+.+ +
T Consensus 190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l 264 (504)
T 2okj_A 190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---I 264 (504)
T ss_dssp EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---H
T ss_pred eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---H
Confidence 788999999999888888877 78888874 3577999999998865 4788999999999999988 8
Q ss_pred HHHHHHHHhCCCeEEEccCCcccccCCCCC-CCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 203 QEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 203 ~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~-~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
++|+++|++||+++++|++|+.+.+..... ..+.... ..+ +++.|++|.++.| .++|+++++++
T Consensus 265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~-~~D-~i~~~~hK~~~~p-~~~g~l~~~~~ 329 (504)
T 2okj_A 265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE-RAN-SVTWNPHKMMGVL-LQCSAILVKEK 329 (504)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG-GCS-EEEECTTSTTCCC-SCCEEEEESST
T ss_pred HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc-cCC-EEEECchhhcCCC-cceEEEEEECH
Confidence 889999999999999999999876532221 1222111 112 6677999998766 68999998664
No 205
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.82 E-value=6.8e-19 Score=165.15 Aligned_cols=199 Identities=10% Similarity=-0.022 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcC------------
Q 022213 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR------------ 129 (301)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~------------ 129 (301)
..+.+.+...+... ...|....+..++++++++|+.+.+|...+.+.+++|+|+|+++..++.++.+
T Consensus 110 ~~~~e~l~~~~~~~-~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 110 GLAGEWLTSTANTN-MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHHHHHCCC-SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred HHHHHHHHHHhccC-CCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence 34456666666533 34687777888999999999998888665567899999999999998888764
Q ss_pred --CCCEEEEcCCCCcchHHHHHhcCc---eEEEeecCCCCCCCCCHHHHHhhcccC------ccEEEEcCCCCCcccCCC
Q 022213 130 --PGANVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINPGNPCGNVFT 198 (301)
Q Consensus 130 --~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~ 198 (301)
+++.|+++.+.|.++...++..|+ +++.++.+. ++.+|++.|++.+++. ++++++++++||||.+-+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~ 266 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP 266 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence 567899999999999999999998 888888753 4679999999998654 778899999999999977
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCC-CCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~-~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
+++|+++|++||+++++|++|+......+.. ..+.... .. -+++.+++|+++.| ..+|++++++.
T Consensus 267 ---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~-~a-Dsv~~~~hK~l~~p-~g~g~l~~~~~ 332 (511)
T 3vp6_A 267 ---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE-RA-NSVTWNPHKMMGVL-LQCSAILVKEK 332 (511)
T ss_dssp ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG-GC-SEEEECTTSTTCCC-SCCEEEEESST
T ss_pred ---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc-cC-CEEEECcccccCCC-cCeEEEEEeCH
Confidence 8999999999999999999999765422111 1111111 11 15667999998776 77899988764
No 206
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.82 E-value=1.9e-19 Score=167.95 Aligned_cols=200 Identities=12% Similarity=0.089 Sum_probs=151.0
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-------CCCEEEcCCHHHHHHHHHHHhcCC---
Q 022213 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-------ADDVYVTLGCKQAVEVILSVLARP--- 130 (301)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~t~g~~~al~~~~~~l~~~--- 130 (301)
+..+.+.+...+.. ....|....+..++++++++++.+.+|.+.+ ...+++|+|+|+|+..++.++.++
T Consensus 87 ~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 87 PAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 44567777777643 3335665556789999999999887775432 246899999999999988776431
Q ss_pred ------CC--------E--EEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCcc------EEEEcC
Q 022213 131 ------GA--------N--VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA------AMVIIN 188 (301)
Q Consensus 131 ------gd--------~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~v~l~~ 188 (301)
|| . |+++.+.|.++...++..|++++.++++ .++.+|++.|++.++++++ ++++++
T Consensus 166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~ 243 (486)
T 1js3_A 166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATL 243 (486)
T ss_dssp HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence 43 3 7789999999999999999999999874 4677999999999976543 788899
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCC-ccccCCCCCEEEEecCcccCCCCcceeEEEEee
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~-~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~ 267 (301)
|+||||.+-+ +++|+++|++||+++++|++|+.+.+..+.... +..+. ..+ .+..+++|.+++| +++||++++
T Consensus 244 ~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~-~ad-si~~~~hK~~~~p-~~~G~l~~~ 317 (486)
T 1js3_A 244 GTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE-FAD-SFNFNPHKWLLVN-FDCSAMWVK 317 (486)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGG-GCS-EEEECHHHHSSCC-SSCEEEEES
T ss_pred CCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcc-ccC-eeEEchhhhcCCC-cceEEEEEe
Confidence 9999999977 999999999999999999999976542211111 11111 123 4457899997776 899999986
Q ss_pred CC
Q 022213 268 DP 269 (301)
Q Consensus 268 ~~ 269 (301)
++
T Consensus 318 ~~ 319 (486)
T 1js3_A 318 RR 319 (486)
T ss_dssp CH
T ss_pred CH
Confidence 53
No 207
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.81 E-value=1.9e-18 Score=156.54 Aligned_cols=157 Identities=13% Similarity=0.205 Sum_probs=127.5
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHH
Q 022213 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI 123 (301)
Q Consensus 44 ~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~ 123 (301)
+|++..+.| ..++.+.+++.+++... .|.+..+..++|+++++++. . +++++++++++++..+
T Consensus 3 ~~~~~~~~~------~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~~i~~~sGt~a~~~a 65 (390)
T 3b8x_A 3 MINYPLASS------TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG------S--KYAVMVSSGSTANLLM 65 (390)
T ss_dssp --CBCSCCC------CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHH
T ss_pred ceeccCCCC------CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC------C--CcEEEECCHHHHHHHH
Confidence 455555543 34567888888888643 35555678999999999983 2 2678888888999999
Q ss_pred HHHh-------cCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccC
Q 022213 124 LSVL-------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV 196 (301)
Q Consensus 124 ~~~l-------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~ 196 (301)
+.++ .++||+|+++.++|.++...++..|.++++++++++ ++.+|++.+++.++++++++++++ ++|..
T Consensus 66 l~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~ 141 (390)
T 3b8x_A 66 IAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP 141 (390)
T ss_dssp HHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC
T ss_pred HHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh
Confidence 9999 789999999999999999999999999999998653 467999999999988888888874 56666
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEccCCcc
Q 022213 197 FTYHHLQEIAEMARKLRVMVVADEVYGH 224 (301)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~ii~D~~y~~ 224 (301)
.+ +++|.++|+++|+++|+|++|+.
T Consensus 142 ~~---~~~i~~l~~~~~~~li~D~a~~~ 166 (390)
T 3b8x_A 142 NN---FDEINKIIGGRDIILLEDNCESM 166 (390)
T ss_dssp CC---HHHHHHHHTTSCCEEEEECTTCT
T ss_pred hh---HHHHHHHHHHcCCEEEEECcCcc
Confidence 66 88999999999999999999995
No 208
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.81 E-value=1e-19 Score=168.09 Aligned_cols=212 Identities=15% Similarity=0.087 Sum_probs=142.2
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCC---CCCHHHH--HHHH-HHHhhhCCCCCCCCCEEE-cCC
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN---SGIPPAR--RAIA-DYLSRDLPYKLSADDVYV-TLG 115 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g~~~lr--~~ia-~~l~~~~~~~~~~~~i~~-t~g 115 (301)
+.|+|..+. + +.++.+.+++.+.+.+.-...|+.. .|...++ ++++ +++.+.++ .+ .+.+ ++|
T Consensus 46 ~~i~l~~~~-~-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g--~~--~~~v~~~s 115 (447)
T 3h7f_A 46 DTLEMIASE-N-----FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG--AE--FANVQPHS 115 (447)
T ss_dssp HSEECCTTC-C-----CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CS--EEECCCSS
T ss_pred CceeEecCC-C-----CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcC--CC--ceEEEeCC
Confidence 678885543 2 2378888988877753211123221 2444444 4444 55544333 22 2444 788
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCcch-H--HH--HHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCC
Q 022213 116 CKQAVEVILSVLARPGANVLLPRPGWPYY-E--GI--AQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINP 189 (301)
Q Consensus 116 ~~~al~~~~~~l~~~gd~Vl~~~p~~~~~-~--~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p 189 (301)
+++++..++.+++++||+|+++.|+|.++ . .. ....+...+++++++ .++.+|++++++.++. +++++++++|
T Consensus 116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~ 194 (447)
T 3h7f_A 116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS 194 (447)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence 89999999999999999999999998762 1 11 122344556666543 3456999999998853 6888888899
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCc-ccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+||++. + +++|.++|+++|+++|+|++|. .+.+.+..+.++.. . -+++.|+||++ +|+|.||++++.
T Consensus 195 ~~~~~~--~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~----~-di~~~s~sK~l--~G~~gG~i~~~~ 262 (447)
T 3h7f_A 195 AYPRVL--D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPH----A-DVVSTTVHKTL--GGGRSGLIVGKQ 262 (447)
T ss_dssp SCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTT----C-SEEEEESSGGG--CCCSCEEEEECG
T ss_pred CCCCcc--C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCC----C-cEEEecCCcCC--CCCCeEEEEECH
Confidence 999887 3 8999999999999999999974 34444432222211 1 17799999986 488999999743
Q ss_pred CCCcccchhHHHHHHhh
Q 022213 269 PNGIFQKSGIIDSIKDC 285 (301)
Q Consensus 269 ~~~~~~~~~~~~~~~~~ 285 (301)
+++++++..
T Consensus 263 --------~~~~~l~~~ 271 (447)
T 3h7f_A 263 --------QYAKAINSA 271 (447)
T ss_dssp --------GGHHHHHHH
T ss_pred --------HHHHHHhhh
Confidence 366666554
No 209
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.81 E-value=1.3e-18 Score=162.77 Aligned_cols=201 Identities=15% Similarity=0.114 Sum_probs=148.4
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHh----c------
Q 022213 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL----A------ 128 (301)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l----~------ 128 (301)
+.++.+.+++.....+.....|.......++++++.+++.+.+|.+ ..+++++|+|+++++..++.++ +
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~ 189 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH 189 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence 4566776666555444334456554456788888778777766643 2378999999999999998874 2
Q ss_pred ---CC------CC-EEEEcCCCCcchHHHHHhcCc---eEEEeecCCCCCCCCCHHHHHhhcccC----cc--EEEEcCC
Q 022213 129 ---RP------GA-NVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADKN----TA--AMVIINP 189 (301)
Q Consensus 129 ---~~------gd-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~--~v~l~~p 189 (301)
++ || .|+++.+.|.++...+...|. +++.++++ .++.+|+++|++.++++ ++ +++++++
T Consensus 190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~ 267 (497)
T 2qma_A 190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG 267 (497)
T ss_dssp CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence 12 46 799999999998888888876 78888874 35679999999988653 33 7788899
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCC-CccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~-~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+||||.+.+ +++|+++|++||+++++|++|+.+.+... .. .+..+. ..+ +++.|++|+++.| .++|++++++
T Consensus 268 ~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~-~~D-~i~~s~hK~l~~p-~~~G~l~~~~ 340 (497)
T 2qma_A 268 TTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVE-RAH-SISVDFHKLFYQT-ISCGALLVND 340 (497)
T ss_dssp CTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGG-GCS-EEEEETTTTTCCC-SSCEEEEESC
T ss_pred CCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcc-cCC-EEEEcchhccCCC-cceEEEEEeC
Confidence 999999988 88999999999999999999998765322 11 111121 112 6677999997777 6999999866
Q ss_pred C
Q 022213 269 P 269 (301)
Q Consensus 269 ~ 269 (301)
+
T Consensus 341 ~ 341 (497)
T 2qma_A 341 K 341 (497)
T ss_dssp G
T ss_pred H
Confidence 4
No 210
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.81 E-value=4.9e-20 Score=170.16 Aligned_cols=168 Identities=13% Similarity=0.127 Sum_probs=124.8
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecC
Q 022213 82 TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (301)
Q Consensus 82 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (301)
+.....++++.+++ + + .+ +++++|+|+++++..++++++++||+|+++.|+|.++...+...|.++++++..
T Consensus 55 ~~~~~~~~~~~la~-~----g--~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-H----S--DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETH 126 (446)
T ss_dssp CSSHHHHHHHHHCS-C----T--TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEE
T ss_pred cchHHHHHHHHHHh-c----C--CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCe
Confidence 33345677777776 5 2 33 689999999999999999999999999999999999988888999999998873
Q ss_pred CCCC----CCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcc-cccCCCCCCCcc
Q 022213 162 PERN----WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMG 236 (301)
Q Consensus 162 ~~~~----~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~ 236 (301)
.+.+ +.+|++.+ +..+++++++++ +|++|.+.+ +++|+++|++||+++|+|++|+. +.|.+. +.+..
T Consensus 127 ~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~ 198 (446)
T 2x3l_A 127 QSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTL 198 (446)
T ss_dssp ECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGG
T ss_pred eccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChH
Confidence 2222 45677777 445788999998 556999999 88999999999999999999996 435443 22332
Q ss_pred ccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 237 ~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
.++.+ +++.|+||.++ ++.++||+++++.
T Consensus 199 ~~g~D---i~~~S~~K~l~-~~~g~g~l~~~~~ 227 (446)
T 2x3l_A 199 NYQAD---YVVQSFHKTLP-ALTMGSVLYIHKN 227 (446)
T ss_dssp GGTCS---EEEECHHHHSS-SCTTCEEEEEETT
T ss_pred HcCCC---EEEECCccccc-cccccEEEEEcCC
Confidence 33322 89999999633 3345899998664
No 211
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.81 E-value=1e-19 Score=165.88 Aligned_cols=204 Identities=13% Similarity=0.080 Sum_probs=128.6
Q ss_pred ChHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCE
Q 022213 60 TAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN 133 (301)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~ 133 (301)
.++.+.+++.+++.+..... |........+++...+++.+.++ .++++|++++| ++++..++.+++++||+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~ 118 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT 118 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence 46889999988774321111 22222333444433344444333 45566666665 88999999999999999
Q ss_pred EEEcCCCCcchH---HHHHhcC--ceEEEeecCCCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHHHHH
Q 022213 134 VLLPRPGWPYYE---GIAQRKQ--VEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAE 207 (301)
Q Consensus 134 Vl~~~p~~~~~~---~~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~ 207 (301)
|+++.|+|..+. ......| ...+.++.+ .++.+|++.+++.+++ +++++++++|+||+ ..+ +++|.+
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~ 191 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMRE 191 (420)
T ss_dssp EEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHH
T ss_pred EEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHH
Confidence 999999997632 2222233 344444443 4567999999999876 58999998999874 566 889999
Q ss_pred HHHhCCCeEEEccCCcccc-cCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHhh
Q 022213 208 MARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC 285 (301)
Q Consensus 208 ~~~~~~~~ii~D~~y~~~~-~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~~ 285 (301)
+|++||+++|+||+|.... +.+..+..+.. ..|++.|+||+++ |.+.||+++++.- +++...++..
T Consensus 192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~-----~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~ 258 (420)
T 3gbx_A 192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVPH-----AHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSA 258 (420)
T ss_dssp HHHHTTCEEEEECTTTHHHHHTTSSCCSTTT-----SSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHH
T ss_pred HHHHcCCEEEEECCcchhceecccCCccccc-----CCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhh
Confidence 9999999999999976433 33322222211 2388999999975 5556999985421 1366666554
No 212
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.80 E-value=2.2e-19 Score=165.95 Aligned_cols=215 Identities=13% Similarity=0.069 Sum_probs=137.6
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHH-H-HHHH---HHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEE
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAE-D-AIVD---AVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV 112 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~-~-~~~~---~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 112 (301)
.+++.++||..|.+.. .+. .++.+. + ++.+ ++.... .|.+ .+..+.+.++++.+.+..+ ..+.++|++
T Consensus 51 ~~g~~ylD~~~~~~~~--~lG~~~p~v~~~~A~~~~~~~~~~~~--~~~~-~~~~~~~~~la~~la~~~~-~~~~~~v~~ 124 (449)
T 2cjg_A 51 ITGRRYLDMFTFVASS--ALGMNPPALVDDREFHAELMQAALNK--PSNS-DVYSVAMARFVETFARVLG-DPALPHLFF 124 (449)
T ss_dssp TTCCEEEESSHHHHTC--SSCBSCHHHHTCHHHHHHHHHHHTCC--CCTT-TCCCHHHHHHHHHHHHHHC-CTTCCEEEE
T ss_pred CCCcEEEEccCCcccc--CCCCCCHHHHHHHHHHHHHHHHHhcC--CCCc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEE
Confidence 3466788887775321 132 367888 8 9988 776432 2332 2333444444444444333 245789999
Q ss_pred cCCHHHHHHHHHHHhc---C----------C-CCEEEEcCCCCcchHHHHHh-c--------Cc-----eEEEeecCCCC
Q 022213 113 TLGCKQAVEVILSVLA---R----------P-GANVLLPRPGWPYYEGIAQR-K--------QV-----EVRHFDLLPER 164 (301)
Q Consensus 113 t~g~~~al~~~~~~l~---~----------~-gd~Vl~~~p~~~~~~~~~~~-~--------g~-----~~~~~~~~~~~ 164 (301)
|+|+++|++.+++.+. . + ||+|++.+|+|+++...... . +. ++..++.+...
T Consensus 125 ~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 204 (449)
T 2cjg_A 125 VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPG 204 (449)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTT
T ss_pred eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCch
Confidence 9999999999998653 2 2 89999999999875432211 1 22 34444442100
Q ss_pred CC--------CCCHHHHHhhcc---cCccEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCC
Q 022213 165 NW--------EVDLDAVEALAD---KNTAAMVIINPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (301)
Q Consensus 165 ~~--------~~~~~~l~~~~~---~~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~ 232 (301)
.. ..+++.|++.++ ++++++++..++||+| ...+.+++++|.++|++||+++|+||+|..+.+.+. .
T Consensus 205 ~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~ 283 (449)
T 2cjg_A 205 LDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT-A 283 (449)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-S
T ss_pred hhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc-c
Confidence 11 134566888774 3455554444468999 589999999999999999999999999998766553 2
Q ss_pred CCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 233 ~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
..+..++...+++ ++||.+ |+||+++++
T Consensus 284 ~~~~~~~~~~di~---t~sK~l-----~iG~~~~~~ 311 (449)
T 2cjg_A 284 WAYQQLDVAPDIV---AFGKKT-----QVCGVMAGR 311 (449)
T ss_dssp STHHHHTCCCSEE---EECGGG-----SSEEEEECG
T ss_pred eeecccCCCceEE---EecCcc-----cEEEEEECH
Confidence 2222222223333 789996 799999854
No 213
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.80 E-value=3.2e-18 Score=160.75 Aligned_cols=181 Identities=11% Similarity=0.006 Sum_probs=138.9
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhc-------C-CCC------EEEEcCCCCcch
Q 022213 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-------R-PGA------NVLLPRPGWPYY 144 (301)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-------~-~gd------~Vl~~~p~~~~~ 144 (301)
.|....+..++++++.+++.+..| .+.+++++|+|+|+|+..++.++. + +|| +|+++.+.|+++
T Consensus 139 ~~~~s~~~~~le~~~~~~la~l~g--~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~ 216 (515)
T 2jis_A 139 TYEIAPVFVLMEEEVLRKLRALVG--WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSI 216 (515)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHT--CSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred chhhchHHHHHHHHHHHHHHHHhC--CCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHH
Confidence 566555656666666666655545 346789999999999999888874 2 576 899999999999
Q ss_pred HHHHHhcCc---eEEEeecCCCCCCCCCHHHHHhhccc------CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 022213 145 EGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (301)
Q Consensus 145 ~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (301)
...++..|. +++.++++ .++.+|++.|++.+++ ++++|++++|+|+||.+.+ +++|+++|+++|++
T Consensus 217 ~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~~ 291 (515)
T 2jis_A 217 QKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGLW 291 (515)
T ss_dssp HHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCE
T ss_pred HHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCCe
Confidence 888888888 88888874 3567999999998865 4788999999999999998 88999999999999
Q ss_pred EEEccCCcccccCCCCCC-CccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 216 VVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 216 ii~D~~y~~~~~~~~~~~-~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
+++|++|+.+.+....+. .+..+. .-.+++.|++|+++.| .++|++++++.
T Consensus 292 l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~ 343 (515)
T 2jis_A 292 LHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDT 343 (515)
T ss_dssp EEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCC
T ss_pred EEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeCh
Confidence 999999998776432221 122111 1127888999997755 57999998664
No 214
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.79 E-value=7.4e-19 Score=159.58 Aligned_cols=209 Identities=11% Similarity=0.069 Sum_probs=138.1
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCC------CCCCHHHH----HHHHHHHhhhCCCCCCCCCEE
Q 022213 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT------NSGIPPAR----RAIADYLSRDLPYKLSADDVY 111 (301)
Q Consensus 42 ~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr----~~ia~~l~~~~~~~~~~~~i~ 111 (301)
..+++++.++| + ++.+.+++.+++.+.....|+. .....+++ +.+++++ + .+++.++
T Consensus 24 ~~~~~~~~~~~-----~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~----g--~~~~~i~ 90 (405)
T 2vi8_A 24 AKIELIASENF-----V--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF----G--AEHANVQ 90 (405)
T ss_dssp HSEECCTTCCC-----C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEECC
T ss_pred cceeeccCccc-----C--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceEEE
Confidence 45777765553 2 6888899888774221111211 11123454 4666666 2 3444444
Q ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH-H--HHhcC--ceEEEeecCCCCCCCCCHHHHHhhccc-CccEEE
Q 022213 112 VTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG-I--AQRKQ--VEVRHFDLLPERNWEVDLDAVEALADK-NTAAMV 185 (301)
Q Consensus 112 ~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 185 (301)
+++| ++++..++.+++++||+|+++.|+|..+.. . +...| .+++.+++++ .++.+|++.+++.+++ ++++++
T Consensus 91 ~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~ 168 (405)
T 2vi8_A 91 PHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIV 168 (405)
T ss_dssp CSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEE
T ss_pred ecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEE
Confidence 5555 999999999999999999999999987643 1 12333 3677776542 3567999999999876 788777
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCccccc-CCCCCCCccccCCCCCEEEEecCcccCC-CCcceeEE
Q 022213 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF-GSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGW 263 (301)
Q Consensus 186 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~-~~~~~~~~~~~~~~~~vi~~~s~SK~~~-~~G~rvG~ 263 (301)
+ +|+|. |...+ +++|.++|++||+++|+|++|..... .+..... +. ..+ ++++|+||+++ .+| ||
T Consensus 169 ~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~-~~d-i~~~s~sK~~~g~~g---G~ 235 (405)
T 2vi8_A 169 A-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---VP-YAH-FVTTTTHKTLRGPRG---GM 235 (405)
T ss_dssp E-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---TT-TCS-EEEEESSSTTCCCSC---EE
T ss_pred E-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCc---cc-cCC-EEEEeccccCCCCCC---eE
Confidence 6 55553 45556 88999999999999999999995332 2211111 11 112 88999999987 556 99
Q ss_pred EEeeCCCCcccchhHHHHHHhhh
Q 022213 264 LVTNDPNGIFQKSGIIDSIKDCL 286 (301)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~ 286 (301)
++++. +++++++...
T Consensus 236 ~~~~~--------~~~~~l~~~~ 250 (405)
T 2vi8_A 236 ILCQE--------QFAKQIDKAI 250 (405)
T ss_dssp EEECH--------HHHHHHHHHH
T ss_pred EEEcH--------HHHHHHHhhh
Confidence 99842 4777776653
No 215
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.76 E-value=1.4e-18 Score=157.81 Aligned_cols=195 Identities=9% Similarity=0.002 Sum_probs=122.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEE-cCCHHH
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV-TLGCKQ 118 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~-t~g~~~ 118 (301)
.+.+++|+.|. .++|+.+.+++.+..... ....+.+ ...++.+++.+.+.+.+|.. ++++|++ |+|+++
T Consensus 38 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~ 108 (398)
T 2fyf_A 38 KPRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATA 108 (398)
T ss_dssp SCSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHH
T ss_pred ccCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhH
Confidence 34567777553 356678888776521110 1112222 11223344444444434433 3468998 999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHHhc--CceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCccc
Q 022213 119 AVEVILSVLARPGANVLLPRPGWPY-YEGIAQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195 (301)
Q Consensus 119 al~~~~~~l~~~gd~Vl~~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~ 195 (301)
+++.++++++++| .+.+..+.|.. ....+... |.+++.++++ .++..+. .+++++++|++++|+||||.
T Consensus 109 al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~ 180 (398)
T 2fyf_A 109 FWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGV 180 (398)
T ss_dssp HHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTE
T ss_pred HHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcce
Confidence 9999999999887 22233333321 12234555 7888888875 2333332 24567899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+++.+++.++ +|+++|+|++|..+.. +..+.. ..+++.|+||.++.+| ++||+++++
T Consensus 181 ~~~~~~i~~~------~~~~vivD~a~~~~~~----~~~~~~-----~di~~~s~sK~~~~~g-g~g~l~~~~ 237 (398)
T 2fyf_A 181 AVAVRRPEGS------DDALVVIDATSGAGGL----PVDIAE-----TDAYYFAPQKNFASDG-GLWLAIMSP 237 (398)
T ss_dssp ECCCCCCTTC------C-CEEEEECTTTTTTS----CCCGGG-----CSEEEECTTSTTCSCS-SEEEEEECH
T ss_pred ecchHHhhhh------cCCeEEEEeccccCCc----ccCccc-----CcEEEEecCcccCCCC-ceEEEEECH
Confidence 9996555544 7999999999987442 112221 2278999999998886 699998843
No 216
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.63 E-value=3.6e-20 Score=171.14 Aligned_cols=230 Identities=16% Similarity=0.046 Sum_probs=151.0
Q ss_pred cCCCCCeeeccCCCCCCCCCC-CChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 38 KNDPRPVVPLGYGDPTAFPCF-RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 38 ~~~~~~~i~l~~g~p~~~p~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
..+++.+|||..|.... .+ ..++.+.+++.+++.......|.. ....+|.+.+++++ + ..+.+++++|+
T Consensus 96 D~dG~~yiD~~~~~~~~--~lGh~~p~V~~Av~~q~~~~~~~~~~~-~~~~~Lae~L~~~~------p-~~~~v~~~nSG 165 (465)
T 2yky_A 96 DVDGHAYVNFLGEYTAG--LFGHSHPVIRAAVERALAVGLNLSTQT-ENEALFAEAVCDRF------P-SIDLVRFTNSG 165 (465)
Confidence 34688899998885321 12 246788899988887543323433 33456666666665 1 35789999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHH----hcCc--eEEEeecCCCCCCCCCHHHHHhhcc---cCccEEE
Q 022213 117 KQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQ----RKQV--EVRHFDLLPERNWEVDLDAVEALAD---KNTAAMV 185 (301)
Q Consensus 117 ~~al~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~ 185 (301)
++|++.+++... ..+|+|++.+++|+++..... ..|+ .+..++. .|++.|++.++ +++++++
T Consensus 166 seA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi 238 (465)
T 2yky_A 166 TEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAIL 238 (465)
Confidence 999999998764 345999999999987643322 1222 1222221 37888888887 4566666
Q ss_pred EcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEE
Q 022213 186 IINPGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (301)
Q Consensus 186 l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~ 264 (301)
+...++++|.+. +.+.+++|.++|++||+++|+||+|. +..+ . ......++.. .-+.+|||.++. |+|+||+
T Consensus 239 ~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~-~~a~~~~gv~---pDi~t~sK~lg~-G~piG~v 311 (465)
T 2yky_A 239 VEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-G-GGAQEMLGIS---ADLTTLGKYIGG-GMSFGAF 311 (465)
Confidence 544356699655 57889999999999999999999999 6332 1 1122222211 234489999886 9999999
Q ss_pred EeeCCCCcccchhHHHHHHh-----h-hcccCCCccccccc
Q 022213 265 VTNDPNGIFQKSGIIDSIKD-----C-LSIYSDIPTFIQVC 299 (301)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~q~~ 299 (301)
+++. ++++.+.. . .....+.++++|.+
T Consensus 312 ~~~~--------~i~~~l~~~~~g~~~~~~T~~~npla~aA 344 (465)
T 2yky_A 312 GGRR--------DLMERFDPARDGAFAHAGTFNNNILTMSA 344 (465)
Confidence 9854 36666554 1 11233556666654
No 217
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.76 E-value=1e-18 Score=161.74 Aligned_cols=173 Identities=13% Similarity=0.065 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH-HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCceEEEeecCC-
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCK-QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP- 162 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~-~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~- 162 (301)
.++.+++.+++.+.+|. +++ +++|+|+| .++..++.++.. +|+.|+++.+.|..+...++..|++++.+++.+
T Consensus 132 ~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~ 208 (456)
T 2z67_A 132 YALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLD 208 (456)
T ss_dssp HHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEecc
Confidence 44555556666555553 344 99999999 456556666544 678899999999999999999999999988643
Q ss_pred CCCCCCCHHHHHhhc-c----cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccc
Q 022213 163 ERNWEVDLDAVEALA-D----KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (301)
Q Consensus 163 ~~~~~~~~~~l~~~~-~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~ 237 (301)
++++.+|+++|++.+ + .++.++++++|+||||.+.+ +++|+++|+++|+++++|++|+.+.++. .+.....
T Consensus 209 ~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~-~~~~~~~ 284 (456)
T 2z67_A 209 GDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYY-LEKLKKA 284 (456)
T ss_dssp TTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH-HHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHh-hHHHHHh
Confidence 345679999999988 4 35666778999999999998 8888899999999999999998765421 0001111
Q ss_pred cCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 238 ~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+....+ +++.|++|.+ +.+.++||+++++
T Consensus 285 ~~~~~D-~~~~s~hK~~-~~p~g~G~l~~~~ 313 (456)
T 2z67_A 285 FKYRVD-AVVSSSDKNL-LTPIGGGLVYSTD 313 (456)
T ss_dssp HTSCCS-EEEEEHHHHH-CCCSSCEEEEESC
T ss_pred hCCCCC-EEEEcCCCCc-CCCCCeEEEEEcC
Confidence 111112 6778999974 4568999999844
No 218
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.73 E-value=1e-16 Score=149.27 Aligned_cols=199 Identities=11% Similarity=0.060 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC--------CCEEEcCCHHHHHHHHHHHhcC---
Q 022213 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA--------DDVYVTLGCKQAVEVILSVLAR--- 129 (301)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--------~~i~~t~g~~~al~~~~~~l~~--- 129 (301)
|..+.+.+...++. ....|....+..++++++++|+.+.+|.+... ...++|+|+|+++..++.+..+
T Consensus 92 ~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 92 PSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence 44556666666654 34468777788999999999998876654221 3679999999999888887643
Q ss_pred ----------------CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccC------ccEEEEc
Q 022213 130 ----------------PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------TAAMVII 187 (301)
Q Consensus 130 ----------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~ 187 (301)
+++.|+++.+.|.++...+...|.+++.++++ .++.+|++.|++++++. +..++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~ 248 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCAT 248 (481)
T ss_dssp HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 56799999999999988888889999999874 45679999999998653 5667888
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCc-cccCCCCCEEEEecCcccCCCCcceeEEEEe
Q 022213 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (301)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~-~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~ 266 (301)
.++|+||.+-+ +++|+++|++||+++++|++|+...+........ ..+. ..+ .+..+++|+++.| ..+|++++
T Consensus 249 ~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~-~aD-si~~~~hK~l~~p-~g~g~l~~ 322 (481)
T 4e1o_A 249 LGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIE-YAD-SFTFNPSKWMMVH-FDCTGFWV 322 (481)
T ss_dssp BSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGG-GCS-EEEECHHHHSSCC-SSCEEEEE
T ss_pred cCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcc-cCC-EEEEChHHhcCCC-CceEEEEE
Confidence 99999999987 8899999999999999999998764322111111 1111 112 5567999997776 56788877
Q ss_pred eC
Q 022213 267 ND 268 (301)
Q Consensus 267 ~~ 268 (301)
.+
T Consensus 323 ~~ 324 (481)
T 4e1o_A 323 KD 324 (481)
T ss_dssp SB
T ss_pred eC
Confidence 55
No 219
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.73 E-value=7.9e-17 Score=157.16 Aligned_cols=170 Identities=12% Similarity=0.058 Sum_probs=129.4
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCC
Q 022213 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165 (301)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 165 (301)
+.++++.+++++. .+ +.+++++|+++++..++.+++++||+|+++.++|.++...+...|+++++++...+ .
T Consensus 207 v~~~ee~la~l~G------~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~ 278 (755)
T 2vyc_A 207 FGESEKYAARVFG------AD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-R 278 (755)
T ss_dssp HHHHHHHHHHHHT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-T
T ss_pred HHHHHHHHHHHhC------CC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-c
Confidence 4577788887772 22 45888999999999999999999999999999999988888889999999887532 2
Q ss_pred CC----C-----CHHHHHhhccc--Ccc--------EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCccc-
Q 022213 166 WE----V-----DLDAVEALADK--NTA--------AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL- 225 (301)
Q Consensus 166 ~~----~-----~~~~l~~~~~~--~~~--------~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~- 225 (301)
++ + |++.+++++++ +++ ++++++| ||+|.+.+ +++|+++|++|++++++|++|...
T Consensus 279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhc
Confidence 32 4 89999998854 333 8888998 79999998 889999999999999999999854
Q ss_pred ccCCC--CCCCccc--cC-CCCCEEEEecCcccCCCCcce-eEEEEeeCC
Q 022213 226 TFGSI--PYTPMGL--FG-SIVPVITLGSISKRWLVPGWR-FGWLVTNDP 269 (301)
Q Consensus 226 ~~~~~--~~~~~~~--~~-~~~~vi~~~s~SK~~~~~G~r-vG~~~~~~~ 269 (301)
.+.+. ...++.. .+ ...++|++.|+||+ ++|.+ .|++++++.
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREG 402 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECC
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCc
Confidence 23321 1222211 12 23467899999998 45666 566666553
No 220
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.72 E-value=1.3e-17 Score=161.58 Aligned_cols=170 Identities=16% Similarity=0.126 Sum_probs=128.6
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HHhcCceEEEeecCCC
Q 022213 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI-AQRKQVEVRHFDLLPE 163 (301)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~ 163 (301)
-+.++++.+|+++. .+ ..+++++|+++++..++.+++++||+|+++.++|.++... +...|+++++++....
T Consensus 174 ~i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~ 246 (730)
T 1c4k_A 174 PAVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRN 246 (730)
T ss_dssp HHHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEEC
T ss_pred HHHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCcc
Confidence 35789999999882 33 3488899999999999999999999999999999988777 7888999988876432
Q ss_pred CCCC----CCHHHH-----HhhcccC------c----cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcc
Q 022213 164 RNWE----VDLDAV-----EALADKN------T----AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224 (301)
Q Consensus 164 ~~~~----~~~~~l-----~~~~~~~------~----~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~ 224 (301)
.|+ +|++.| +++++++ + +++++++| ||+|.+.+ +++|+++|+++++++++|++|..
T Consensus 247 -~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~ 321 (730)
T 1c4k_A 247 -PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVG 321 (730)
T ss_dssp -TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCC
T ss_pred -ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEccccc
Confidence 233 678887 8888765 4 78899998 58999998 88999999999999999999975
Q ss_pred c-ccCCCC--CCCcc--ccCC-CCCEEEEecCcccCCCCcceeE-EEEeeC
Q 022213 225 L-TFGSIP--YTPMG--LFGS-IVPVITLGSISKRWLVPGWRFG-WLVTND 268 (301)
Q Consensus 225 ~-~~~~~~--~~~~~--~~~~-~~~vi~~~s~SK~~~~~G~rvG-~~~~~~ 268 (301)
. .|.+.. ..++. .++. +.++++++|+||+ ++|.+.| ++++++
T Consensus 322 ~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~--L~g~~~gg~I~v~~ 370 (730)
T 1c4k_A 322 YEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQ--QAGFSQTSQIHKKD 370 (730)
T ss_dssp GGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHH--SSCCTTCEEEEEEC
T ss_pred ccccCcccCCcCcccccccCCCCCCEEEEECCCCC--CCCCCCEEEEEecc
Confidence 3 343211 11221 1122 3467999999998 4566654 554544
No 221
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.71 E-value=1.5e-16 Score=143.59 Aligned_cols=168 Identities=14% Similarity=0.181 Sum_probs=122.6
Q ss_pred HHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH--HHHHhcCc--eEEEeecCCC
Q 022213 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE--GIAQRKQV--EVRHFDLLPE 163 (301)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~--~~~~~~~~~~ 163 (301)
++++++++.+.+.++ .+ +.+++|+|+|++++.++..+ ++||+|++++++|+++. ..++..|. +++.++....
T Consensus 35 ~~~~~~~~~l~~~~~--~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 110 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYN--AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT 110 (379)
T ss_dssp HHHHHHHHHHHHHHT--CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred HHHHHHHHHHHHHhC--CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence 344444444444333 23 68899999999999988655 69999999999998643 34555564 6777765321
Q ss_pred ------CC-CCCCHHHHHhhcc-cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCc
Q 022213 164 ------RN-WEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM 235 (301)
Q Consensus 164 ------~~-~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~ 235 (301)
.. ..+|++++++.++ .+++++++++++||||.+++.+++++|.++|++||+++|+|+++. . . .+..+
T Consensus 111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~~ 185 (379)
T 3ke3_A 111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLDM 185 (379)
T ss_dssp SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCCH
T ss_pred ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-ccccc
Confidence 11 1489999999885 478999999999999999999999999999999999999999975 1 1 22223
Q ss_pred cccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 236 GLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 236 ~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
..++- .+++.|++|+++.+ .++|+++++.
T Consensus 186 ~~~~~---d~~~~s~~K~l~~~-~g~g~~~~~~ 214 (379)
T 3ke3_A 186 KELGI---DVLISAPQKGWSST-PCAGLVMLSA 214 (379)
T ss_dssp HHHTC---SEEEECTTTTTCSC-CCEEEEEECH
T ss_pred cccCC---CEEEecchhhcCCC-CceEEEEECH
Confidence 22222 27888999987653 4589998743
No 222
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.71 E-value=9.1e-17 Score=149.24 Aligned_cols=206 Identities=11% Similarity=0.043 Sum_probs=124.4
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCCCC---EEEc
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT------NSGIPPARRAIADYLSRDLPYKLSADD---VYVT 113 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~l~~~~~~~~~~~~---i~~t 113 (301)
..|.|-.++ + .+++.|.+++.+.+.+.-...|+. .....++++...+.+.+.+| .+.+. .+++
T Consensus 55 ~~i~lias~-n-----~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~ 126 (490)
T 2a7v_A 55 RGLELIASE-N-----FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQP 126 (490)
T ss_dssp HSEECCTTC-C-----CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCC
T ss_pred cCceEECCC-C-----CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeC
Confidence 567776543 2 257889999888775422112221 11234666333344444344 34432 3556
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH---H-----HHHhcCceE--EEeecCCCCCCCCCHHHHHhhccc-Ccc
Q 022213 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYE---G-----IAQRKQVEV--RHFDLLPERNWEVDLDAVEALADK-NTA 182 (301)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~---~-----~~~~~g~~~--~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 182 (301)
+++++|+..++.++++|||+|+++.+.|.++. . .+...|..+ +.+++++ .++.+|++++++.+.+ +++
T Consensus 127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k 205 (490)
T 2a7v_A 127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR 205 (490)
T ss_dssp SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence 68899999999999999999999999886532 1 223445433 3444433 3467999999998863 688
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCc-ccccCCCCCCCccccCCCCCEEEEecCcccCCCCccee
Q 022213 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF 261 (301)
Q Consensus 183 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rv 261 (301)
+++++.++||+ ..+ +++|.++|++||+++++|+++. .+.+.+..+.++. . - -+++.|+||++ .|.|.
T Consensus 206 lIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-~-a---Div~~S~hK~l--~Gp~G 273 (490)
T 2a7v_A 206 LIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-H-A---DIVTTTTHKTL--RGARS 273 (490)
T ss_dssp EEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-T-C---SEEEEESSGGG--CSCSC
T ss_pred EEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-C-C---CEEEECCcccC--ccccc
Confidence 88888888875 455 8899999999999999999965 4444443333332 1 1 18889999986 46678
Q ss_pred EEEEeeCC
Q 022213 262 GWLVTNDP 269 (301)
Q Consensus 262 G~~~~~~~ 269 (301)
|++++++.
T Consensus 274 G~i~~~~~ 281 (490)
T 2a7v_A 274 GLIFYRKG 281 (490)
T ss_dssp EEEEEECS
T ss_pred hheeeccc
Confidence 99998763
No 223
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.70 E-value=3e-16 Score=144.37 Aligned_cols=191 Identities=22% Similarity=0.286 Sum_probs=124.0
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHH--HHHHhcCCCCCCCC--CCCC----HHHHHHHHHHHhhhCCCCCCCCCEEEcCC
Q 022213 44 VVPLGYGDPTAFPCFRTAVEAEDAI--VDAVRSGKFNCYAT--NSGI----PPARRAIADYLSRDLPYKLSADDVYVTLG 115 (301)
Q Consensus 44 ~i~l~~g~p~~~p~~~~~~~~~~~~--~~~~~~~~~~~Y~~--~~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (301)
+..++.|.|+ ...|+.+.+.+ ..... .+..|.+ .+|. .++++.+++++ | .+++++++++|
T Consensus 66 ~~~~~~g~~~----~~~p~~v~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~la~~~----g--~~~~~i~~~~g 133 (438)
T 1wyu_A 66 KAFLGGGVRS----HHVPPVVQALAARGEFLT--AYTPYQPEVSQGVLQATFEYQTMIAELA----G--LEIANASMYDG 133 (438)
T ss_dssp TCCCCSSCCC----CCCCHHHHHHHTSHHHHH--CCSCCSGGGCHHHHHHHHHHHHHHHHHH----T--SSEECSCBSSH
T ss_pred ccccCCCccC----CcCcHHHHHHHhcchhhh--cCCCCcchhhhhHHHHHHHHHHHHHHHh----C--CCccceEEeCc
Confidence 4566677653 45566664443 22222 1122321 3343 35555566655 3 46678999999
Q ss_pred HHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHHH----HhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCC
Q 022213 116 CKQAVEVILSVL-ARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190 (301)
Q Consensus 116 ~~~al~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 190 (301)
++.+.+.+..++ .++||+|+++.+.|+.+...+ +..|++++.++. .++.+|+++ +++++++|++++|
T Consensus 134 ~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~---~~~~~d~~~----i~~~t~~v~i~~p- 205 (438)
T 1wyu_A 134 ATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL---EGGRTPLPE----VGEEVGAVVVQNP- 205 (438)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC---BTTBCCCCC----CCTTEEEEEEESS-
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC---cCCccCHHH----hCCCeEEEEEECC-
Confidence 994444443332 478999999999999886544 458999999986 234577665 5667899999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEccC---CcccccCCCCCCCccccCCCCCEEEEecCcccCC----CCcceeEE
Q 022213 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEV---YGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL----VPGWRFGW 263 (301)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~---y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~----~~G~rvG~ 263 (301)
||||.+.+ +++|+++|+++|+++|+|.. +..+ ..+ ..++. + +++.| +|.|+ +.|.|+||
T Consensus 206 n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~------~~~-~~~g~--D-~~~~s-~kk~~~~~~~~Gp~~G~ 271 (438)
T 1wyu_A 206 NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVL------KPP-GAYGA--D-IAVGD-GQSLGLPMGFGGPHFGF 271 (438)
T ss_dssp CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTB------CCH-HHHTC--S-EEEEE-CTTTTCCCGGGCSCCEE
T ss_pred CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCc------CCC-ccCCC--C-EEEEC-CcccCCCccCCCCCeeE
Confidence 99999998 88999999999999996632 3221 111 22222 2 55666 66554 45679999
Q ss_pred EEeeC
Q 022213 264 LVTND 268 (301)
Q Consensus 264 ~~~~~ 268 (301)
++++.
T Consensus 272 l~~~~ 276 (438)
T 1wyu_A 272 LATKK 276 (438)
T ss_dssp EEECG
T ss_pred EEEcH
Confidence 99854
No 224
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.69 E-value=5e-16 Score=144.40 Aligned_cols=198 Identities=13% Similarity=0.034 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-------CCEEEcCCHHHHHHHHHHHhcC-----
Q 022213 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-------DDVYVTLGCKQAVEVILSVLAR----- 129 (301)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-------~~i~~t~g~~~al~~~~~~l~~----- 129 (301)
..+.+.+...++. ....|....+..++++++.+|+.+.+|.+... ...++|+|+|+++..++.+..+
T Consensus 88 ~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 88 AIVADMLSGAIAC-IGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHCC-CSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCc-cccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 4455556665543 33467776788899999999999877754221 3689999999999888877632
Q ss_pred --------------CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccC------ccEEEEcCC
Q 022213 130 --------------PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINP 189 (301)
Q Consensus 130 --------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p 189 (301)
+++.|+++...|.++...++..|++++.++++ .++ +|+++|++.+++. +..++++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~ 243 (475)
T 3k40_A 167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLG 243 (475)
T ss_dssp HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEec
Confidence 34689999999999999999999999999875 345 9999999998653 456788899
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCC-ccccCCCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~-~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
+|+||.+.+ +++|+++|++||+++++|++|+...+....... +..+. .. -.+..+++|+++.| ..+|++++.+
T Consensus 244 ~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~-~~-Ds~~~~~hK~l~~p-~g~g~l~~~~ 317 (475)
T 3k40_A 244 TTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE-SA-DSFNFNPHKWMLVN-FDCSAMWLKD 317 (475)
T ss_dssp CTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGG-GC-SEEEECHHHHSSCC-SSCEEEEESS
T ss_pred CCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcc-cC-CEEEECchhccCCC-CceEEEEEeC
Confidence 999999988 889999999999999999999875432111111 11111 11 16678999986655 5688888866
Q ss_pred C
Q 022213 269 P 269 (301)
Q Consensus 269 ~ 269 (301)
.
T Consensus 318 ~ 318 (475)
T 3k40_A 318 P 318 (475)
T ss_dssp G
T ss_pred H
Confidence 4
No 225
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.68 E-value=5e-16 Score=144.29 Aligned_cols=214 Identities=12% Similarity=0.047 Sum_probs=141.3
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcC
Q 022213 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSG---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~-~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (301)
.+++.+|||..|..... ++ .++.+.+++.+++... ....|+. ....++++.+++.+.+..+ ...++|++++
T Consensus 60 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~ 134 (472)
T 1ohv_A 60 VDGNRMLDLYSQISSIP--IGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMA 134 (472)
T ss_dssp TTSCEEEESSHHHHTCS--SCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEES
T ss_pred CCCCEEEECCCCHhhcc--cCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence 45778999988864321 22 4788889988765321 1123443 2457899999997766443 2567999999
Q ss_pred CHHHHHHHHHHHhc-------C------------------CC---CEEEEcCCCCcchHHHHH-hcCce--------E--
Q 022213 115 GCKQAVEVILSVLA-------R------------------PG---ANVLLPRPGWPYYEGIAQ-RKQVE--------V-- 155 (301)
Q Consensus 115 g~~~al~~~~~~l~-------~------------------~g---d~Vl~~~p~~~~~~~~~~-~~g~~--------~-- 155 (301)
|+++|++.+++.+. . +| ++|++.+++|+++..... ..|.. .
T Consensus 135 sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~ 214 (472)
T 1ohv_A 135 CGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFD 214 (472)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCC
T ss_pred CchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCC
Confidence 99999999998873 1 46 899999999998644332 22221 0
Q ss_pred -EEeecCCCC-----C--C-----CCCHHHHHhhccc------CccEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCe
Q 022213 156 -RHFDLLPER-----N--W-----EVDLDAVEALADK------NTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVM 215 (301)
Q Consensus 156 -~~~~~~~~~-----~--~-----~~~~~~l~~~~~~------~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~ 215 (301)
..+++.... . + ..|++.|++.+++ ++++|++...+|++|. ..+.+.+++|.++|++||++
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~l 294 (472)
T 1ohv_A 215 WPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCA 294 (472)
T ss_dssp CCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCE
T ss_pred CcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCE
Confidence 111221000 0 0 1257888888865 5666766666888997 56799999999999999999
Q ss_pred EEEccCCcccccCCCCCCCccccCCC--CCEEEEecCcccCCCCcceeEEEE
Q 022213 216 VVADEVYGHLTFGSIPYTPMGLFGSI--VPVITLGSISKRWLVPGWRFGWLV 265 (301)
Q Consensus 216 ii~D~~y~~~~~~~~~~~~~~~~~~~--~~vi~~~s~SK~~~~~G~rvG~~~ 265 (301)
+|+||+|..+.+.+. ...+..++-. .+ +.||||.+ +.| ||++
T Consensus 295 li~DEv~~g~g~~g~-~~~~~~~gv~~~~D---i~t~sK~~-l~G---G~~~ 338 (472)
T 1ohv_A 295 FLVDEVQTGGGSTGK-FWAHEHWGLDDPAD---VMTFSKKM-MTG---GFFH 338 (472)
T ss_dssp EEEECTTTTTTTTSS-SSGGGGGCCSSCCS---EEEECGGG-SSE---EEEE
T ss_pred EEEeCcccCCCCCCC-chhccccCCCCCCC---EEEEcccc-ccC---CccC
Confidence 999999987655442 2233333211 22 34899995 445 7776
No 226
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.67 E-value=6.8e-16 Score=148.59 Aligned_cols=167 Identities=14% Similarity=0.115 Sum_probs=125.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCC
Q 022213 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165 (301)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 165 (301)
+.++++.+|+++.. ...+++++|++.|+..++.+++++||+|+++.++|.++...+...|+++++++... +.
T Consensus 197 i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~-~~ 268 (715)
T 3n75_A 197 HKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTR-NA 268 (715)
T ss_dssp HHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCB-CT
T ss_pred HHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEeccc-cc
Confidence 57899999999832 23567788888999999999999999999999999999999999999999998653 23
Q ss_pred CCC---------CHHHHHhhcccC--cc---EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccc-cCCC
Q 022213 166 WEV---------DLDAVEALADKN--TA---AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSI 230 (301)
Q Consensus 166 ~~~---------~~~~l~~~~~~~--~~---~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~-~~~~ 230 (301)
+++ |++.++++++++ ++ ++++++| |++|.+.+ +++|+++|++++ +++|++|+... |.+
T Consensus 269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~~- 341 (715)
T 3n75_A 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSP- 341 (715)
T ss_dssp TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGSG-
T ss_pred cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccccCC-
Confidence 443 899999988642 33 7899999 99999999 677777777663 79999998653 432
Q ss_pred CCCCccccCC---CCC-EEEEecCcccCCCCcc-eeEEEEeeCC
Q 022213 231 PYTPMGLFGS---IVP-VITLGSISKRWLVPGW-RFGWLVTNDP 269 (301)
Q Consensus 231 ~~~~~~~~~~---~~~-vi~~~s~SK~~~~~G~-rvG~~~~~~~ 269 (301)
.......... .+. +++++|+||+++ |+ ..|++.+++.
T Consensus 342 ~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~ 383 (715)
T 3n75_A 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGD 383 (715)
T ss_dssp GGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESC
T ss_pred ccccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCch
Confidence 1111111111 122 367999999954 44 3588888664
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.50 E-value=3.3e-14 Score=128.34 Aligned_cols=194 Identities=12% Similarity=0.016 Sum_probs=132.3
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC--------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC-CCEE
Q 022213 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYAT--NSGIPPARRAIADYLSRDLPYKLSA-DDVY 111 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~--------~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~ 111 (301)
+++.++.| | -+.|+.|.+++.+.+.+.. ....+. ..-+.+.|+.+++++ +++. ++|+
T Consensus 27 ~~yl~~ag-p-----t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll------~~~~~~evi 94 (386)
T 3qm2_A 27 QVFNFSSG-P-----AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL------NIPSNYKVL 94 (386)
T ss_dssp CCEECCSS-S-----CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH------TCCTTEEEE
T ss_pred cCccccCC-C-----CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEE
Confidence 45555544 3 3567888888876553210 111111 235788999999999 4433 4688
Q ss_pred E-cCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHHhcCceEEEeecC-CCCCCCCCHHHHHhhcccCccEEEEc
Q 022213 112 V-TLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALADKNTAAMVII 187 (301)
Q Consensus 112 ~-t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~l~ 187 (301)
+ |+|+|+++++++..+.++||+|++..-++.+ +...++..| ++..++.+ ...+..++++.++..+++++++|.++
T Consensus 95 f~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~ 173 (386)
T 3qm2_A 95 FCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYC 173 (386)
T ss_dssp EEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEEC
T ss_pred EEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEE
Confidence 8 6899999999999999999998755444433 334456678 88888764 12333367778888888889999889
Q ss_pred CCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEe
Q 022213 188 NPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (301)
Q Consensus 188 ~p~nptG~~-~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~ 266 (301)
+..|.||+. .+ +++|. +|+++++|.+++. +..+..+..++ +.+.|..|.+|-+| +|++++
T Consensus 174 h~et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v 234 (386)
T 3qm2_A 174 PNETIDGIAIDE---TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIV 234 (386)
T ss_dssp SEETTTTEECCC---CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEE
T ss_pred CCcCCcCEecCc---hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEE
Confidence 888999996 77 55553 7999999999986 33444455443 46689999987666 788877
Q ss_pred eC
Q 022213 267 ND 268 (301)
Q Consensus 267 ~~ 268 (301)
+.
T Consensus 235 ~~ 236 (386)
T 3qm2_A 235 RE 236 (386)
T ss_dssp EG
T ss_pred CH
Confidence 65
No 228
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.49 E-value=7.9e-14 Score=125.33 Aligned_cols=186 Identities=11% Similarity=-0.004 Sum_probs=131.2
Q ss_pred CCCChHHHHHHHHHHHhcCC-----C---CCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC-CCEEE-cCCHHHHHHHHH
Q 022213 57 CFRTAVEAEDAIVDAVRSGK-----F---NCYAT--NSGIPPARRAIADYLSRDLPYKLSA-DDVYV-TLGCKQAVEVIL 124 (301)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~-----~---~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~-t~g~~~al~~~~ 124 (301)
..+.|+.|.+++.+.+.+.. . ...++ ..-+.+.|+.+++++ ++++ ++|++ |.|+|+++++++
T Consensus 21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL------AVPDNYKVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEEEESSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEEEEcCchHHHHHHHH
Confidence 46788999999988775210 0 00110 011356777888888 3443 56888 589999999999
Q ss_pred HHhcCC--CCEEEEcCCCCcc--hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHH
Q 022213 125 SVLARP--GANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (301)
Q Consensus 125 ~~l~~~--gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 200 (301)
..+..+ ||+|++..-++.+ +...++..|..++.++.+. ++..+++.++..++++++.|.+++..|.||+.++.
T Consensus 95 ~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~--~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi- 171 (377)
T 3e77_A 95 LNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLG--SYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF- 171 (377)
T ss_dssp HHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCS--SSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-
T ss_pred HhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCC--CcCCCCChHHhccCCCccEEEEeCccCchheEchh-
Confidence 999865 9999877665553 3345566787777666532 34466777777788889999999889999999994
Q ss_pred HHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEeeCC
Q 022213 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~~~~ 269 (301)
+|+++|+++++|.+.+. +..+..+..++ +++.|..|++|-+| +|+++++..
T Consensus 172 -------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~ 222 (377)
T 3e77_A 172 -------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDD 222 (377)
T ss_dssp -------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETT
T ss_pred -------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHH
Confidence 36789999999999986 33344444443 47789999997677 677777653
No 229
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.43 E-value=6.7e-13 Score=118.74 Aligned_cols=192 Identities=12% Similarity=0.091 Sum_probs=129.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCC---CCCC--CC-----CCCCHHHHHHHHHHHhhhCCCCCC-CCC
Q 022213 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK---FNCY--AT-----NSGIPPARRAIADYLSRDLPYKLS-ADD 109 (301)
Q Consensus 41 ~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~---~~~Y--~~-----~~g~~~lr~~ia~~l~~~~~~~~~-~~~ 109 (301)
.+++++|+.|- -+.|+.|.+++.+.+.... ..-| .. ..-+.+.|+.+++++ +++ +++
T Consensus 3 ~~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll------~~~~~~~ 70 (361)
T 3m5u_A 3 AMRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY------ELNDDYE 70 (361)
T ss_dssp -CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH------TCCTTEE
T ss_pred ccceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh------CCCCCce
Confidence 45778888773 3567899999988764210 0001 11 012456777888887 344 457
Q ss_pred EEE-cCCHHHHHHHHHHHhcCCCCEEE-EcCCCCc-chHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEE
Q 022213 110 VYV-TLGCKQAVEVILSVLARPGANVL-LPRPGWP-YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (301)
Q Consensus 110 i~~-t~g~~~al~~~~~~l~~~gd~Vl-~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 186 (301)
|++ |+|+|+++++++..+. +||+++ +..-.|. .+...++..|.++..++.+....+..+++. + ++++++.|.+
T Consensus 71 v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~ 146 (361)
T 3m5u_A 71 VLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYI 146 (361)
T ss_dssp EEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEE
T ss_pred EEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEE
Confidence 887 9999999999999998 888763 2222332 234455678999999988654332234555 3 7788999999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEEEEe
Q 022213 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (301)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~~~~ 266 (301)
++..|.||..++. +++ +|+++++|.+.+.. ..+..+..++ +++.|..|.+|-+| +|++++
T Consensus 147 ~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g----~~~id~~~~d-----~~~~s~~K~~gp~G--~g~l~~ 206 (361)
T 3m5u_A 147 CSNNTIYGTQYQN--------YPK-TKTPLIVDASSDFF----SRKVDFSNIA-----LFYGGVQKNAGISG--LSCIFI 206 (361)
T ss_dssp ESEETTTTEECSS--------CCC-CSSCEEEECGGGTT----SSCCCCTTEE-----EEEEETTTTSSCTT--CEEEEE
T ss_pred eCCCCCcceeCCc--------ccc-cCCEEEEEcccccC----CCCCCcccCC-----EEEEechhccCCCc--cEEEEE
Confidence 9888999998772 233 49999999999862 2333333321 78889999997666 777777
Q ss_pred eC
Q 022213 267 ND 268 (301)
Q Consensus 267 ~~ 268 (301)
+.
T Consensus 207 ~~ 208 (361)
T 3m5u_A 207 RK 208 (361)
T ss_dssp EH
T ss_pred cH
Confidence 43
No 230
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.22 E-value=1.9e-11 Score=111.43 Aligned_cols=175 Identities=12% Similarity=0.035 Sum_probs=118.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCC----CCEEEEcCCCCcchHHHHHhcCceEEEeecC
Q 022213 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP----GANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (301)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (301)
...+.+.+..++.+..|.+ +....++++|+|.+..+++.+.+++ ++.|+++.-+|.+....+...|+++++++..
T Consensus 96 ~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~ 174 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV 174 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEee
Confidence 4456666666666655532 2234588888885555555555443 8999999999999999999999999998763
Q ss_pred C-CCCCCCCHHHHHhhccc---CccEEEEcCCC-CCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcc
Q 022213 162 P-ERNWEVDLDAVEALADK---NTAAMVIINPG-NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236 (301)
Q Consensus 162 ~-~~~~~~~~~~l~~~~~~---~~~~v~l~~p~-nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~ 236 (301)
+ ++...+|++.+++++++ ..+++++.+|+ +.+|.+-+ +++|+++|++||+++++|++|+.........+ -.
T Consensus 175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~-~~ 250 (450)
T 3bc8_A 175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLI-QQ 250 (450)
T ss_dssp EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHH-HH
T ss_pred ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhHH-HH
Confidence 2 23567999999999965 24566666774 45677877 99999999999999999999996432110000 01
Q ss_pred ccC-CCCCEEEEecCcccCCCCcceeEEEEee
Q 022213 237 LFG-SIVPVITLGSISKRWLVPGWRFGWLVTN 267 (301)
Q Consensus 237 ~~~-~~~~vi~~~s~SK~~~~~G~rvG~~~~~ 267 (301)
.+. ...+ .++.|++|++.. -...+++.+.
T Consensus 251 a~~~~~AD-~~v~S~HK~l~a-~~~~~~l~~r 280 (450)
T 3bc8_A 251 GARVGRID-AFVQSLDKNFMV-PVGGAIIAGF 280 (450)
T ss_dssp HHHHSCCC-EEEEEHHHHHSC-CSSCEEEEES
T ss_pred HhcccCCC-EEEECCccCCCc-hhccEEEEec
Confidence 110 0111 677899999544 3445666654
No 231
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.21 E-value=1.9e-11 Score=110.59 Aligned_cols=175 Identities=14% Similarity=0.093 Sum_probs=119.2
Q ss_pred HHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCC----CCEEEEcCCCCcchHHHHHhcCceEEEeecCC-CCCCCC
Q 022213 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP----GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEV 168 (301)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 168 (301)
.+|++. .|++ .....++++|+|.++.+++.+.+++ ||+|+++.-+|.+....+...|+++++++... .+...+
T Consensus 123 ld~L~~-~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~i 200 (501)
T 3hl2_A 123 LDIIKL-AGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRT 200 (501)
T ss_dssp HHHHHH-TTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEE
T ss_pred HHHHHH-cCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCC
Confidence 345544 4544 2346899999998887777777763 49999999999999999999999999997632 234678
Q ss_pred CHHHHHhhcccC---ccEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccc-cCCCCCCCccccC-CCC
Q 022213 169 DLDAVEALADKN---TAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFG-SIV 242 (301)
Q Consensus 169 ~~~~l~~~~~~~---~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~-~~~~~~~~~~~~~-~~~ 242 (301)
|++.+++++++. ..++++.++ .|..+.+-+ +++|+++|++||+++++|++|+... +....+.....++ -+
T Consensus 201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD- 276 (501)
T 3hl2_A 201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID- 276 (501)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC-
T ss_pred CHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc-
Confidence 999999998752 334444444 454456666 9999999999999999999998744 1111111111222 12
Q ss_pred CEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 243 ~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
+++.|..|.+.+| +. |.++.... +++++++..
T Consensus 277 --~vVqS~HK~llvp-IG-G~ii~~~d------~e~l~~~~~ 308 (501)
T 3hl2_A 277 --AFVQSLDKNFMVP-VG-GAIIAGFN------DSFIQEISK 308 (501)
T ss_dssp --EEEEEHHHHHCCC-SS-CEEEEESC------HHHHHHHHH
T ss_pred --EEEecccccceee-cC-ceEEEeCC------HHHHHHHHH
Confidence 6888999997766 11 44443222 346666544
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.18 E-value=3.3e-10 Score=104.01 Aligned_cols=205 Identities=17% Similarity=0.134 Sum_probs=129.5
Q ss_pred cCCCCCeeeccCCC-CCCCCCCCChHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCC
Q 022213 38 KNDPRPVVPLGYGD-PTAFPCFRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (301)
Q Consensus 38 ~~~~~~~i~l~~g~-p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (301)
..+++.+||+..|. +... -..++.+.+++.++++... .+. +.....+|.+.+++++ + ..+.++++++
T Consensus 83 D~dG~~ylD~~~g~~~~~l--GH~hp~v~~Av~~q~~~~~--~~~~~~~~~~~lae~l~~~~----p---~~~~v~f~~S 151 (454)
T 4ao9_A 83 DADGHRYADFIAEYTAGVY--GHSAPEIRDAVIEAMQGGI--NLTGHNLLEGRLARLICERF----P---QIEQLRFTNS 151 (454)
T ss_dssp ETTCCEEEESSGGGGTTTT--CSCCHHHHHHHHHHHHTCS--CCCSEESSHHHHHHHHHHHS----T---TCSEEEEESS
T ss_pred ECCCCEEEEccccHHhhcc--cCCCHHHHHHHHHHHhcCC--CccCCcHHHHHHHHHHHHhC----C---CCCEEEEeCc
Confidence 44688899997762 2211 1246789999999987543 222 2222345555555554 2 4578999999
Q ss_pred HHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHh----cC--ceEEEeecCCCCCCCCCHHHHHhhcccC--ccEEE
Q 022213 116 CKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQR----KQ--VEVRHFDLLPERNWEVDLDAVEALADKN--TAAMV 185 (301)
Q Consensus 116 ~~~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~----~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~ 185 (301)
+++|.+.+++.... ..++|+...-+|++....... .. .....+|. .|.+.+++.+++. ..+.+
T Consensus 152 GsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAav 224 (454)
T 4ao9_A 152 GTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVV 224 (454)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEE
T ss_pred hHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEE
Confidence 99999999987753 347899888888864321110 01 11222221 4788888877542 23444
Q ss_pred EcCC-CCCcccC-CCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCcceeEE
Q 022213 186 IINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263 (301)
Q Consensus 186 l~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~rvG~ 263 (301)
+.-| ....|.+ .+.+.+++|.++|++||+++|.||+... ..+..+ ....++-..+++ +++|.++ .|+.+|.
T Consensus 225 IvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~-a~e~~gv~PDi~---t~gK~lg-gG~Piga 297 (454)
T 4ao9_A 225 LVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHG-LANKLGIRSDLT---TLGKYIG-GGMSFGA 297 (454)
T ss_dssp EECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTC-HHHHHTCCCSEE---EEEGGGG-TTSSCEE
T ss_pred EeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcccc-chhccCCCCcEE---EeccccC-CCCccee
Confidence 5555 4456654 5678899999999999999999999963 212111 112233333455 7789954 6789999
Q ss_pred EEee
Q 022213 264 LVTN 267 (301)
Q Consensus 264 ~~~~ 267 (301)
+++.
T Consensus 298 ~~~~ 301 (454)
T 4ao9_A 298 FGGR 301 (454)
T ss_dssp EEEC
T ss_pred eeeH
Confidence 9874
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.05 E-value=8.2e-09 Score=94.97 Aligned_cols=221 Identities=16% Similarity=0.147 Sum_probs=129.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHH
Q 022213 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (301)
Q Consensus 39 ~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (301)
.+++.+||+..|.-.. .--..++.+.+++.+++..-....+.. ...+...++++.+.+..+ .-..+.+++++++++
T Consensus 61 ~dG~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p-~~~~~~v~f~~sGsE 136 (456)
T 4atq_A 61 VDGNSFIDLGSGIAVT-SVGASDPAVVAAVQEAAAHFTHTCFMV--TPYEGYVAVTEQLNRLTP-GDHAKRTVLFNSGAE 136 (456)
T ss_dssp TTSCEEEESSHHHHTC-TTCTTCHHHHHHHHHHHHHCSCCTTTT--SCCHHHHHHHHHHHHHSS-CSSCEEEEEESSHHH
T ss_pred CCCCEEEEccccHHHH-hcCCCCHHHHHHHHHHHhhccCcccCc--cCcHHHHHHHHHHHHhCC-CCCCcEEEEeCChHH
Confidence 4577788887661110 011245788899998887532111111 112333345555544221 112457999999999
Q ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHh-cC-------------ceEEEeecCCC----CCCCCCHHHHHh---
Q 022213 119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQR-KQ-------------VEVRHFDLLPE----RNWEVDLDAVEA--- 175 (301)
Q Consensus 119 al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~-~g-------------~~~~~~~~~~~----~~~~~~~~~l~~--- 175 (301)
|.+.+++.... ...+|+...-+|++....... .+ ..+..+|.... .....+.+.++.
T Consensus 137 A~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 216 (456)
T 4atq_A 137 AVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAIT 216 (456)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHH
Confidence 99999987642 447899888899875332221 11 12333333210 001112222222
Q ss_pred ----hcccCccEEEEcCC-CCCcccC-CCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEec
Q 022213 176 ----LADKNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (301)
Q Consensus 176 ----~~~~~~~~v~l~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s 249 (301)
.+..+..+.++.-| ..-.|.+ .+.+.+++|.++|++||+++|.||+...+...+. ......++-..+++ +
T Consensus 217 ~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~-~~a~e~~gv~PDiv---t 292 (456)
T 4atq_A 217 MIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE-WFAVDHEGVVPDII---T 292 (456)
T ss_dssp HHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTCCCSEE---E
T ss_pred HHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc-cccccccCCCCchh---h
Confidence 22233445555556 4445654 5668999999999999999999999998765553 33344444445566 6
Q ss_pred CcccCCCCcceeEEEEeeC
Q 022213 250 ISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 250 ~SK~~~~~G~rvG~~~~~~ 268 (301)
++|.+ ..|+.+|.+++..
T Consensus 293 ~gK~l-ggg~P~~av~~~~ 310 (456)
T 4atq_A 293 MAKGI-AGGLPLSAITGRA 310 (456)
T ss_dssp ECGGG-GTTSSCEEEEEEH
T ss_pred hhhcc-cCcCCceeeEecH
Confidence 68995 5789999998853
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.04 E-value=9.7e-09 Score=94.87 Aligned_cols=230 Identities=14% Similarity=0.082 Sum_probs=137.7
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCC-CHHHHHHHHHHHhhhCCCCCCCCCEEEcCCH
Q 022213 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSG-IPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (301)
Q Consensus 38 ~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (301)
..+++.+||+..|.-... --...+.+.+++.++++.-. .|....+ ..+....+|+.|.+..+ .+.+.|++++++
T Consensus 63 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sG 137 (473)
T 4e3q_A 63 DVNGRRYLDANSGLWNMV-AGFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSG 137 (473)
T ss_dssp ETTCCEEEETTTTTTTCT-TCSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSH
T ss_pred eCCCCEEEEcccCHHHhh-ccCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCch
Confidence 456889999988732211 11245788899998887432 2222111 23445556666655332 235689999999
Q ss_pred HHHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHH-HhcCc-----------eEEEeecCCC---CCCCCC----
Q 022213 117 KQAVEVILSVLA-------RPG-ANVLLPRPGWPYYEGIA-QRKQV-----------EVRHFDLLPE---RNWEVD---- 169 (301)
Q Consensus 117 ~~al~~~~~~l~-------~~g-d~Vl~~~p~~~~~~~~~-~~~g~-----------~~~~~~~~~~---~~~~~~---- 169 (301)
++|.+.+++... +++ .+|+...-+|++..... ...+. ....++.... ......
T Consensus 138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 217 (473)
T 4e3q_A 138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF 217 (473)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence 999999998753 133 57888888888642222 11111 1222221100 000011
Q ss_pred ----HHHHHhhccc---CccEEEEcCC-CCCcccC-CCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCC
Q 022213 170 ----LDAVEALADK---NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (301)
Q Consensus 170 ----~~~l~~~~~~---~~~~v~l~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~ 240 (301)
.+++++.+.. +..+.++.-| ..-.|.+ .+.+.+++|.++|++||+++|.||+...|...+.- .....++-
T Consensus 218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~-fa~e~~gv 296 (473)
T 4e3q_A 218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNT-WGCVTYDF 296 (473)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSS-CHHHHTTC
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccch-hHHHhcCC
Confidence 2234443322 3345556656 4445654 55679999999999999999999999998655532 23333444
Q ss_pred CCCEEEEecCcccCCCCcceeEEEEeeCCCCcccchhHHHHHHh
Q 022213 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (301)
Q Consensus 241 ~~~vi~~~s~SK~~~~~G~rvG~~~~~~~~~~~~~~~~~~~~~~ 284 (301)
..+++ +++|.++..++.+|.+++++ ++.+.+..
T Consensus 297 ~PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~ 329 (473)
T 4e3q_A 297 TPDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLET 329 (473)
T ss_dssp CCSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHH
T ss_pred CCChH---HhcccccCCCCCcccccccH--------HHHHHhcc
Confidence 44566 67999765559999999843 46666644
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.03 E-value=4.5e-09 Score=103.44 Aligned_cols=215 Identities=13% Similarity=0.072 Sum_probs=126.8
Q ss_pred CeeeccCCCCCCCCCCC-C-hHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHH
Q 022213 43 PVVPLGYGDPTAFPCFR-T-AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (301)
Q Consensus 43 ~~i~l~~g~p~~~p~~~-~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (301)
.++|+..|.-.. .++ . .+.+.+++.++++.-. .+.......+...++++.|.+..+.+ ..+.+++++++++|+
T Consensus 381 ~ylD~~sg~~~~--~lGh~~~p~i~~Ai~~Q~~~l~--h~~~~~~~~~~~~~Lae~L~~~~p~~-~l~~vff~~SGSeA~ 455 (831)
T 4a0g_A 381 QQFDACASWWTQ--GPDPTFQAELAREMGYTAARFG--HVMFPENVYEPALKCAELLLDGVGKG-WASRVYFSDNGSTAI 455 (831)
T ss_dssp EEEETTHHHHTC--CCCHHHHHHHHHHHHHHHHHHS--SCCCTTEECHHHHHHHHHHHHTTTTT-TCCEEEEESSHHHHH
T ss_pred heeeecccHhhc--CCCCCCCHHHHHHHHHHHhhcc--cccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCChhHHH
Confidence 567776651110 122 2 5788999998887421 11111112344446666665532200 146899999999999
Q ss_pred HHHHHHhc-----CCC------------CEEEEcCCCCcch-HHHHHhcCce---------------E------------
Q 022213 121 EVILSVLA-----RPG------------ANVLLPRPGWPYY-EGIAQRKQVE---------------V------------ 155 (301)
Q Consensus 121 ~~~~~~l~-----~~g------------d~Vl~~~p~~~~~-~~~~~~~g~~---------------~------------ 155 (301)
+.+++... ..| .+|+...-+|++- ...+...|.. +
T Consensus 456 E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 535 (831)
T 4a0g_A 456 EIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNG 535 (831)
T ss_dssp HHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETT
T ss_pred HHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCC
Confidence 99998762 122 3688888888753 2222222210 0
Q ss_pred -EEeecCCC-C-------CCCCC------------------HHHHHhhccc-------CccEEEEcCC--CCCcccCC-C
Q 022213 156 -RHFDLLPE-R-------NWEVD------------------LDAVEALADK-------NTAAMVIINP--GNPCGNVF-T 198 (301)
Q Consensus 156 -~~~~~~~~-~-------~~~~~------------------~~~l~~~~~~-------~~~~v~l~~p--~nptG~~~-~ 198 (301)
..++.... . .+ .+ .+.+++.+.+ ...+.++.-| ++..|... +
T Consensus 536 ~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~ 614 (831)
T 4a0g_A 536 SWNISLPESFSEIAPEYGTF-TSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD 614 (831)
T ss_dssp EEEEECCTTSCCCCSSTTEE-SCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred ceEecCCccccccccccccc-cchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence 01111100 0 00 01 2456666642 2334455555 57777754 7
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecCcccCCCCc-ceeEEEEeeC
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTND 268 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G-~rvG~~~~~~ 268 (301)
.+.+++|.++|++||+++|+||++..+...+..+ ....++-..+++ ++||.++. | +++|+++++.
T Consensus 615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~ 680 (831)
T 4a0g_A 615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD 680 (831)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH
Confidence 8899999999999999999999999886666544 333333334444 79999765 6 8999999854
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.67 E-value=2.8e-07 Score=83.26 Aligned_cols=220 Identities=11% Similarity=0.058 Sum_probs=124.3
Q ss_pred cccHHHHHHHHHhhcccCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHH
Q 022213 22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPARRAIAD 95 (301)
Q Consensus 22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~ 95 (301)
..+|.++++...+. ...-|+|=..+. .+.+.+.+++...+.+.=.-.|+ --+.+.++..-..+
T Consensus 39 Dpei~~~i~~E~~R-----Q~~~ieLIASEN------~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~ 107 (490)
T 3ou5_A 39 DPEMWELLQREKDR-----QCRGLELIASEN------FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQR 107 (490)
T ss_dssp CHHHHHHHHHHHHH-----HHHSEECCTTCC------CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-----HHcCceEecCCC------cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHH
Confidence 44566666544332 245577744442 34567878777666532111222 11123344443334
Q ss_pred HHhhhCCCCCCCC----CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCc--eEEEeecC
Q 022213 96 YLSRDLPYKLSAD----DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG--------IAQRKQV--EVRHFDLL 161 (301)
Q Consensus 96 ~l~~~~~~~~~~~----~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~ 161 (301)
...+-++. +.. ||-. .++++|...++.+|++|||+|+-.+..+.++.. .+...|. +...++++
T Consensus 108 rak~lF~a--~~A~w~VNVQP-~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd 184 (490)
T 3ou5_A 108 RALEAFDL--DPAQWGVNVQP-YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 184 (490)
T ss_dssp HHHHHTTC--CTTTEEEECCC-SSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEE
T ss_pred HHHHHhCC--CccccCCCCCc-CCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccC
Confidence 44444442 322 3333 456799999999999999999988776665421 1112222 34444444
Q ss_pred CCCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcc-cccCCCCCCCccccC
Q 022213 162 PERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFG 239 (301)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~~~~ 239 (301)
++ +..+|.|++++...+ +++.|++..-.+| ..++ ++++.++|.+-|.++++|-++.. ++-++..+.|+.. .
T Consensus 185 ~~-t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-A 257 (490)
T 3ou5_A 185 PK-TGLIDYNQLALTARLFRPRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-A 257 (490)
T ss_dssp TT-TTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-C
T ss_pred CC-CCcccHHHHHHHHhhcCCCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-c
Confidence 43 446999999987765 7887776544444 3456 56666666688999999999873 4444555555543 2
Q ss_pred CCCCEEEEecCcccCCCCcceeEEEEeeC
Q 022213 240 SIVPVITLGSISKRWLVPGWRFGWLVTND 268 (301)
Q Consensus 240 ~~~~vi~~~s~SK~~~~~G~rvG~~~~~~ 268 (301)
. |+..|++|+ ++|-|-|.|...+
T Consensus 258 D----vVTtTTHKT--LrGPrGG~Il~~~ 280 (490)
T 3ou5_A 258 D----IVTTTTHKT--LRGARSGLIFYRK 280 (490)
T ss_dssp S----EEEEESSST--TCSCSCEEEEEEC
T ss_pred e----EEecccccc--ccCCCceEEEecc
Confidence 1 889999999 5788889988765
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=82.86 E-value=5.8 Score=36.63 Aligned_cols=112 Identities=16% Similarity=0.284 Sum_probs=62.5
Q ss_pred CCCCCCCCEEEcCCHHHHHHHHHHHhcC---C---------C-C-----EEEEcCCCCcc-------------------h
Q 022213 102 PYKLSADDVYVTLGCKQAVEVILSVLAR---P---------G-A-----NVLLPRPGWPY-------------------Y 144 (301)
Q Consensus 102 ~~~~~~~~i~~t~g~~~al~~~~~~l~~---~---------g-d-----~Vl~~~p~~~~-------------------~ 144 (301)
...++++.|.++.++..++...+++|.+ . | . ..+...|.|.- +
T Consensus 125 ~L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~ 204 (525)
T 3gh5_A 125 DLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQ 204 (525)
T ss_dssp EEEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHH
T ss_pred EEEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHH
Confidence 3345667788888887787777777742 1 1 1 13455666641 1
Q ss_pred HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
......+++....+.+..+.+|.+..+.+.++-..... .......|..++.+++++|++.|+++++-||
T Consensus 205 id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VI 273 (525)
T 3gh5_A 205 IDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVI 273 (525)
T ss_dssp HHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 22333445555555554444444333322221110000 0011234678999999999999999999876
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=80.38 E-value=8.6 Score=32.19 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=59.6
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (301)
+..-+++|.+++..=..+.+.|.+.|-+|++..-.-.......+..|.+...+..+- -|.+.+++.+++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS-----ANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 444566666666555777788889999988876554455556666676666665533 355565554432
Q ss_pred CccEEEEcCC-CCCccc--CCCHHHHHHHHHHH
Q 022213 180 NTAAMVIINP-GNPCGN--VFTYHHLQEIAEMA 209 (301)
Q Consensus 180 ~~~~v~l~~p-~nptG~--~~~~~~l~~i~~~~ 209 (301)
+.. ++++|. .++.+. -++.++|+++.++-
T Consensus 103 ~iD-iLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 103 RID-VLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp CEE-EEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 233 445554 222222 46788998888753
No 239
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=74.21 E-value=9.2 Score=35.22 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=22.9
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 194 GNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
|..++.+++++|++.|+++++-||-
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6789999999999999999998874
No 240
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=71.95 E-value=23 Score=28.60 Aligned_cols=97 Identities=19% Similarity=0.115 Sum_probs=53.7
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.+++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 344566776665555677778888898888876554444445555565666554432 355555555432
Q ss_pred CccEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 022213 180 NTAAMVIINPGNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ~~~~v~l~~p~nptG--~~~~~~~l~~i~~ 207 (301)
+...++-+--..+.+ ...+.+++++..+
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 345544332222222 2456676665544
No 241
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=71.83 E-value=9.4 Score=35.10 Aligned_cols=27 Identities=30% Similarity=0.509 Sum_probs=23.4
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 192 PCGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
|.|..++.+++++|++.|+++++-||-
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 346679999999999999999998873
No 242
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=70.72 E-value=22 Score=29.13 Aligned_cols=65 Identities=11% Similarity=-0.057 Sum_probs=38.5
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-......+...+......++ -|.+.+++++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv-------~~~~~v~~~~ 90 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDF-------SCETGIMAFI 90 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCT-------TSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCC-------CCHHHHHHHH
Confidence 4456777777766556777788888877776644433334444555655554444 3455555544
No 243
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=69.96 E-value=31 Score=28.49 Aligned_cols=97 Identities=15% Similarity=0.092 Sum_probs=53.4
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-----
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 179 (301)
+....+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.++++++.
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 3444566666665555677778888898888765444444444455555555555432 355565554432
Q ss_pred -CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 180 -NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 -~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
+...++ .+. ....+ ...+.++++++.+
T Consensus 100 g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 100 GRVDVLV-NNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp SCCCEEE-ECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 344444 433 22222 2356677765443
No 244
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=66.09 E-value=36 Score=27.86 Aligned_cols=65 Identities=12% Similarity=0.027 Sum_probs=39.3
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
..+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++++
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~ 70 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVA 70 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHH
Confidence 4566666665555667777888898888776555555555555555555554432 3455555544
No 245
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=65.88 E-value=33 Score=27.75 Aligned_cols=68 Identities=21% Similarity=0.032 Sum_probs=33.4
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 73 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALA 73 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHH
Confidence 344566666665555677777888898888765444333344444444455544432 34555555543
No 246
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=65.85 E-value=40 Score=27.06 Aligned_cols=64 Identities=17% Similarity=0.079 Sum_probs=35.3
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
..+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+......++ -|.+.++++++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~ 69 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDV-------ADPASVERGFA 69 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCT-------TCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecC-------CCHHHHHHHHH
Confidence 45667766655556677777788988877643322233333334544444433 34555555443
No 247
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=64.51 E-value=36 Score=27.57 Aligned_cols=95 Identities=12% Similarity=0.040 Sum_probs=51.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-..........+.+...+..+- -|.+.+++.+++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 344577777766555677778888898888765544444444444454455554432 355555554432
Q ss_pred CccEEEEcCC-CCCcc--cCCCHHHHHHHH
Q 022213 180 NTAAMVIINP-GNPCG--NVFTYHHLQEIA 206 (301)
Q Consensus 180 ~~~~v~l~~p-~nptG--~~~~~~~l~~i~ 206 (301)
+...++ ++. ..+.+ ...+.+++++..
T Consensus 82 ~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~ 110 (259)
T 4e6p_A 82 GLDILV-NNAALFDLAPIVEITRESYEKLF 110 (259)
T ss_dssp SCCEEE-ECCCCCCCBCGGGCCHHHHHHHH
T ss_pred CCCEEE-ECCCcCCCCCcccCCHHHHHHHH
Confidence 344444 433 22222 234666666433
No 248
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=64.27 E-value=31 Score=28.53 Aligned_cols=96 Identities=14% Similarity=0.015 Sum_probs=50.8
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 334566666665555667777888898888765443444444444455555554432 355555554432
Q ss_pred CccEEEEcCCCCCccc--CCCHHHHHHHH
Q 022213 180 NTAAMVIINPGNPCGN--VFTYHHLQEIA 206 (301)
Q Consensus 180 ~~~~v~l~~p~nptG~--~~~~~~l~~i~ 206 (301)
+...++-+--..+.+. ..+.++++++.
T Consensus 103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 131 (277)
T 3gvc_A 103 GVDKLVANAGVVHLASLIDTTVEDFDRVI 131 (277)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 3454443322222222 34666766553
No 249
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=64.20 E-value=22 Score=28.25 Aligned_cols=93 Identities=11% Similarity=0.016 Sum_probs=50.4
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc---CccEEE
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMV 185 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~ 185 (301)
.+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+. -+.+.+++.+++ ....+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~l- 76 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPSTV- 76 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSEE-
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCEE-
Confidence 467777776665677777878888887765544444444444444444444322 355666665543 23444
Q ss_pred EcCC-CCCccc--CCCHHHHHHHHH
Q 022213 186 IINP-GNPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 186 l~~p-~nptG~--~~~~~~l~~i~~ 207 (301)
+.+. ..+.+. ..+.+++++..+
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EEeCCcCCCCccccCCHHHHHHHHH
Confidence 3433 222222 356666665443
No 250
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=64.03 E-value=15 Score=33.73 Aligned_cols=24 Identities=25% Similarity=0.369 Sum_probs=22.1
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 194 GNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
|..++.+++++|++.|+++++-||
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VI 237 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVL 237 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 667999999999999999999887
No 251
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=63.96 E-value=24 Score=25.37 Aligned_cols=81 Identities=10% Similarity=-0.000 Sum_probs=49.9
Q ss_pred CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHH
Q 022213 130 PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209 (301)
Q Consensus 130 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~ 209 (301)
.+..|+...|.+..+...+...|+....+-.....+-.-.+..+|++++......++.-+. .++..+.+++--.|
T Consensus 32 ~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl~-----~l~~~~~RRLqlAA 106 (119)
T 1ofu_X 32 DARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLE-----PLSRAARKQLSRAA 106 (119)
T ss_dssp SSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCS-----SCCHHHHHHHHHHH
T ss_pred cCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECCC-----cCChHHHHHHHHHH
Confidence 4456777777777888888888875333322222221123456777887766666666533 26677788887777
Q ss_pred HhCCCe
Q 022213 210 RKLRVM 215 (301)
Q Consensus 210 ~~~~~~ 215 (301)
++.+.+
T Consensus 107 ~~g~~~ 112 (119)
T 1ofu_X 107 QLGQAQ 112 (119)
T ss_dssp HHHTCE
T ss_pred HhCCCe
Confidence 766544
No 252
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=63.23 E-value=35 Score=27.90 Aligned_cols=69 Identities=23% Similarity=0.133 Sum_probs=41.9
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.++++++
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 93 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLAE 93 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHHH
Confidence 3445567776666555677778888898888765444444455555566666665533 35555555443
No 253
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=62.70 E-value=49 Score=25.19 Aligned_cols=81 Identities=10% Similarity=-0.000 Sum_probs=51.4
Q ss_pred CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHH
Q 022213 130 PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209 (301)
Q Consensus 130 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~ 209 (301)
.+..|+...|-+..+...+...|+....+-.....+-.-.+..+|++++......++.-+. .++..+.+++--.|
T Consensus 74 ~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~~~aVl~Wl~-----~l~~~~~RRLqlAA 148 (161)
T 1oft_A 74 DARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLE-----PLSRAARKQLSRAA 148 (161)
T ss_dssp SSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTCEEEEEECCS-----SCCHHHHHHHHHHH
T ss_pred cCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCCccEEEECCC-----cCChHHHHHHHHHH
Confidence 4456777777777888888889876333332222222234567788888777666666433 26777888887777
Q ss_pred HhCCCe
Q 022213 210 RKLRVM 215 (301)
Q Consensus 210 ~~~~~~ 215 (301)
++.+.+
T Consensus 149 e~g~~~ 154 (161)
T 1oft_A 149 QLGQAQ 154 (161)
T ss_dssp HHTTCE
T ss_pred HhCCCe
Confidence 766654
No 254
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=62.51 E-value=53 Score=26.92 Aligned_cols=97 Identities=20% Similarity=0.124 Sum_probs=55.6
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
++...+++|.|++..=..+.+.|.+.|-+|++..-.-.... ..+...|.+...+..+- -|.+.+++.+++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDV-----TDELAIEAAFSKLD 81 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 44555667766666557777888899999988754433222 23344566776665533 245555554432
Q ss_pred ----CccEEEEcCC-CCCccc--CCCHHHHHHHHH
Q 022213 180 ----NTAAMVIINP-GNPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 ----~~~~v~l~~p-~nptG~--~~~~~~l~~i~~ 207 (301)
+.. ++++|. .++.+. -++.++|+++.+
T Consensus 82 ~~~G~iD-iLVNNAG~~~~~~~~~~~~e~~~~~~~ 115 (255)
T 4g81_D 82 AEGIHVD-ILINNAGIQYRKPMVELELENWQKVID 115 (255)
T ss_dssp HTTCCCC-EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHCCCCc-EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 233 445554 222222 467788877665
No 255
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=61.96 E-value=59 Score=26.52 Aligned_cols=68 Identities=25% Similarity=0.146 Sum_probs=40.9
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.+...+..+- -|.+.++++++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 77 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALID 77 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHHH
Confidence 444566776665555677778888898888776555555555555555555554432 34555555543
No 256
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=61.20 E-value=19 Score=29.96 Aligned_cols=70 Identities=26% Similarity=0.180 Sum_probs=42.9
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++++++
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~ 83 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDL-----QDLSSVRRFADG 83 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCT-----TCHHHHHHHHHT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCC-----CCHHHHHHHHHh
Confidence 3444577777766555777778888898888765443334444455555666665532 356667666543
No 257
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=60.87 E-value=26 Score=28.79 Aligned_cols=66 Identities=15% Similarity=0.054 Sum_probs=39.3
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++++
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~ 95 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNV-----TSEDSVLAAI 95 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHH
Confidence 34567776666555677778888898888765444444444555555555555433 2445555443
No 258
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=60.63 E-value=60 Score=26.61 Aligned_cols=99 Identities=15% Similarity=0.015 Sum_probs=53.3
Q ss_pred CCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
+++...+++|.|++..=..+...|.+.|-.|++..-.-.. ....+...+.+...+..+- -|.+.+++.+++
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVEL-----QDDAQCRDAVAQTI 78 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeec-----CCHHHHHHHHHHHH
Confidence 3444455666665554466677888888777765432222 2223344555666665533 245555544432
Q ss_pred ----CccEEEEcCC--CCCcccCCCHHHHHHHHHH
Q 022213 180 ----NTAAMVIINP--GNPCGNVFTYHHLQEIAEM 208 (301)
Q Consensus 180 ----~~~~v~l~~p--~nptG~~~~~~~l~~i~~~ 208 (301)
+.. ++++|. +.+...-.+.++|+++.++
T Consensus 79 ~~~G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 79 ATFGRLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHSCCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHhCCCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 334 345554 2334445677888776654
No 259
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=59.64 E-value=56 Score=26.26 Aligned_cols=68 Identities=16% Similarity=0.005 Sum_probs=40.2
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
+....+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 74 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADI-----SKEADVDAAV 74 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TSHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHH
Confidence 3444566776665555667777778898888775544444445555555555555433 2455555544
No 260
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=59.18 E-value=46 Score=27.22 Aligned_cols=99 Identities=16% Similarity=0.054 Sum_probs=56.1
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCC-cchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccE
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (301)
++...+++|.|++..=..+.+.|.+.|-+|++..-.- ......++..|.+...+..+-. |.+..+..++....=
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFD 81 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCC
Confidence 4445566666666555777788888998887664322 2334556677777777765433 223333333332222
Q ss_pred EEEcCCC-CCc--ccCCCHHHHHHHHHH
Q 022213 184 MVIINPG-NPC--GNVFTYHHLQEIAEM 208 (301)
Q Consensus 184 v~l~~p~-npt--G~~~~~~~l~~i~~~ 208 (301)
++++|.. .+. -.-++.++|+++.++
T Consensus 82 iLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 82 ILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 4555542 222 235678888887764
No 261
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=59.16 E-value=45 Score=26.99 Aligned_cols=96 Identities=17% Similarity=0.131 Sum_probs=53.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (301)
....+++|.+++..=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI-----ADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC-----CCHHHHHHHHHHHHHHhC
Confidence 345677777766655777778888898888775544444444444455555555432 355555544432
Q ss_pred CccEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 022213 180 NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ~~~~v~l~~p~-nptG--~~~~~~~l~~i~~ 207 (301)
+.. +++++.. .+.+ ...+.+++++..+
T Consensus 82 ~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 82 AID-LLHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp SEE-EEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 233 3444432 2222 2346677766554
No 262
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=59.12 E-value=69 Score=25.78 Aligned_cols=96 Identities=18% Similarity=0.052 Sum_probs=51.6
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhccc---
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (301)
....+++|.+++..=..+.+.|.+.|.+|++..-.-...... ++..+.++..+..+- -|.+.++++++.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDA-----RNEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcC-----CCHHHHHHHHHHHHh
Confidence 344567777666655777778888898888765444333322 333466666666543 345555554432
Q ss_pred --CccEEEEcCCC-CCccc--CCCHHHHHHHHH
Q 022213 180 --NTAAMVIINPG-NPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 --~~~~v~l~~p~-nptG~--~~~~~~l~~i~~ 207 (301)
+.. +++.+.. ...+. ..+.+++++..+
T Consensus 81 ~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 81 HAPLE-VTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp HSCEE-EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCce-EEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 233 3444442 22221 356666665443
No 263
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=58.90 E-value=51 Score=26.51 Aligned_cols=96 Identities=17% Similarity=0.102 Sum_probs=50.4
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-.......+..+.+...+..+- -|.+.+++++++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 444567777666555677778888898888765443333333343333344444322 355666555432
Q ss_pred CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 180 NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
+...++ ++. ..+.+ ...+.+++++..+
T Consensus 83 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 83 GVDILV-NNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 345444 433 22222 2346677765443
No 264
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=58.70 E-value=78 Score=26.27 Aligned_cols=97 Identities=26% Similarity=0.192 Sum_probs=50.8
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh---cC-ceEEEeecCCCCCCCCCHHHHHhhccc-
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR---KQ-VEVRHFDLLPERNWEVDLDAVEALADK- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~---~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-.-.......+. .+ .++..+..+- -|.+.++++++.
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 113 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTV 113 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHH
Confidence 3444566666665555677778888898888765444443333332 22 3444444432 355555554432
Q ss_pred -----CccEEEEcCC-CCCccc--CCCHHHHHHHHH
Q 022213 180 -----NTAAMVIINP-GNPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 -----~~~~v~l~~p-~nptG~--~~~~~~l~~i~~ 207 (301)
+...++ .+. ..+.+. ..+.++++++.+
T Consensus 114 ~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 114 VDAFGALDVVC-ANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444 433 222222 346677665554
No 265
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=58.03 E-value=35 Score=28.01 Aligned_cols=97 Identities=15% Similarity=0.046 Sum_probs=51.5
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCC------------cc---hHHHHHhcCceEEEeecCCCCCCCCCH
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW------------PY---YEGIAQRKQVEVRHFDLLPERNWEVDL 170 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~------------~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.. .. ....+...+.++..+..+- -|.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV-----RDR 83 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC-----CCH
Confidence 344566776665555677778888898887753321 01 1122334465666665533 355
Q ss_pred HHHHhhccc------CccEEEEcCCCCCcccCCCHHHHHHHHH
Q 022213 171 DAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAE 207 (301)
Q Consensus 171 ~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~ 207 (301)
+.+++.+++ +...++-+--..+.+...+.+++++..+
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 555554432 3454443322233333467777776654
No 266
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=57.83 E-value=49 Score=25.78 Aligned_cols=95 Identities=13% Similarity=0.116 Sum_probs=53.1
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCC-HHHHHhhcccCccEEEEc
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVD-LDAVEALADKNTAAMVII 187 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~v~l~ 187 (301)
+|++|.++...=..+++.|.+.|..|.+..-.-.... ...+++.+..++ .| .+.++++++ +..+|+.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~~D~-------~d~~~~~~~~~~-~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP---QYNNVKAVHFDV-------DWTPEEMAKQLH-GMDAIINV 70 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---CCTTEEEEECCT-------TSCHHHHHTTTT-TCSEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh---hcCCceEEEecc-------cCCHHHHHHHHc-CCCEEEEC
Confidence 3667765555556677777778877775532221111 113444444333 35 778888776 46666554
Q ss_pred CC-CCCcccCCCHHHHHHHHHHHHhCCC
Q 022213 188 NP-GNPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 188 ~p-~nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
.. ..+.-.-.+..-...+++.|++.++
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKAEV 98 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHTTC
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHhCC
Confidence 33 2233333344556788888888774
No 267
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=57.45 E-value=46 Score=26.55 Aligned_cols=94 Identities=12% Similarity=0.028 Sum_probs=47.4
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------Ccc
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTA 182 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~ 182 (301)
.+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++. +..
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC-----CCHHHHHHHHHHHHHhcCCCc
Confidence 466666665555667777778898888765444333333333333444444432 245555554432 344
Q ss_pred EEEEcCCCCCccc--CCCHHHHHHHHH
Q 022213 183 AMVIINPGNPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 183 ~v~l~~p~nptG~--~~~~~~l~~i~~ 207 (301)
.++-+--..+.+. ..+.+++++..+
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 4443322222222 346666665543
No 268
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=56.86 E-value=80 Score=25.84 Aligned_cols=98 Identities=13% Similarity=0.029 Sum_probs=51.5
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -|.+.+++++++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDV-----TQPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 4445677777766555677778888898888765443333222 233454555554432 355566555432
Q ss_pred ----CccEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 022213 180 ----NTAAMVIINPGNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ----~~~~v~l~~p~nptG--~~~~~~~l~~i~~ 207 (301)
+...++-+--....+ ...+.++++++.+
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 445544332222211 2346677754433
No 269
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=56.30 E-value=76 Score=25.41 Aligned_cols=68 Identities=13% Similarity=-0.078 Sum_probs=38.4
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.++++++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV-----TSEKDVQTALA 78 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHH
Confidence 344567776665555677777778888877654433334444444454555554432 34556655543
No 270
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=56.03 E-value=32 Score=28.72 Aligned_cols=17 Identities=6% Similarity=-0.162 Sum_probs=10.9
Q ss_pred HHHHHhcCceEEEeecC
Q 022213 145 EGIAQRKQVEVRHFDLL 161 (301)
Q Consensus 145 ~~~~~~~g~~~~~~~~~ 161 (301)
...++..|+..+.+++.
T Consensus 38 ~~~lk~~G~N~VRi~~~ 54 (302)
T 1bqc_A 38 FADIKSHGANTVRVVLS 54 (302)
T ss_dssp HHHHHHTTCSEEEEEEC
T ss_pred HHHHHHcCCCEEEEEcc
Confidence 44556677777777764
No 271
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=54.79 E-value=78 Score=25.84 Aligned_cols=97 Identities=12% Similarity=0.071 Sum_probs=52.1
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---HhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-.-....... +..+.++..+..+- -|.+.+++.++.
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLD 98 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34456677776665557777788888999888764433332222 33455665554432 355566555432
Q ss_pred ----CccEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 022213 180 ----NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ----~~~~v~l~~p~-nptG--~~~~~~~l~~i~~ 207 (301)
+...++ ++.. ...+ ...+.+++++..+
T Consensus 99 ~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 99 EQGIDVDILV-NNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp HHTCCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHCCCCCEEE-ECCCCCCCCCchhCCHHHHHHHHH
Confidence 344444 4332 1112 2356666665443
No 272
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=54.70 E-value=77 Score=26.66 Aligned_cols=101 Identities=13% Similarity=0.001 Sum_probs=53.1
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch---HHHHHh-------cCceEEEeecCCCCCCCCCHHHHHh
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY---EGIAQR-------KQVEVRHFDLLPERNWEVDLDAVEA 175 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~---~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~l~~ 175 (301)
....|++|.++.-.-..++..|.+.|..|....-.-... ...+.. .+++++..++ .|.+.+++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-------RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-------TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-------CCHHHHHH
Confidence 345788877654444566667777787776543221111 111111 3455554443 46788888
Q ss_pred hcccCccEEEEcCC-CCCcccCCCH--------HHHHHHHHHHHhCCC
Q 022213 176 LADKNTAAMVIINP-GNPCGNVFTY--------HHLQEIAEMARKLRV 214 (301)
Q Consensus 176 ~~~~~~~~v~l~~p-~nptG~~~~~--------~~l~~i~~~~~~~~~ 214 (301)
+++ +...|+-+.. .++.....+. .....+++.|++.++
T Consensus 97 ~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 97 VMK-GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp HTT-TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred Hhc-CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 776 5666554432 2221111111 123458888888874
No 273
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=54.24 E-value=35 Score=31.83 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=21.8
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 194 GNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
|..++.+++++|++.|+++++-||
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCcee
Confidence 568999999999999999998776
No 274
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=53.65 E-value=9.5 Score=34.31 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
=+.++++++++.|+++|+-||+|-++-...
T Consensus 74 Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 357899999999999999999999998754
No 275
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=53.34 E-value=81 Score=25.32 Aligned_cols=67 Identities=15% Similarity=-0.023 Sum_probs=36.3
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.++++++
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 71 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV-----TIEEDWQRVVA 71 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHH
Confidence 34566776665555677777778898887654332222333333344444444432 24555555443
No 276
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=53.03 E-value=26 Score=34.44 Aligned_cols=26 Identities=19% Similarity=0.367 Sum_probs=23.3
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 192 PCGNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
+.|..++.+++++|++.|+++++-||
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VI 417 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVI 417 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 45678999999999999999999876
No 277
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=51.84 E-value=61 Score=26.54 Aligned_cols=97 Identities=12% Similarity=-0.021 Sum_probs=56.2
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc---
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (301)
+...+++|.|++..=..+.+.|.+.|-+|++.+-.-.... ..++..|.+...+..+- -|.+.+++.+++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv-----t~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADV-----SKKKDVEEFVRRTFE 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3445566666555556677777888988887654433332 23345677777766543 355666555432
Q ss_pred ---CccEEEEcCCC--CCcc--cCCCHHHHHHHHHH
Q 022213 180 ---NTAAMVIINPG--NPCG--NVFTYHHLQEIAEM 208 (301)
Q Consensus 180 ---~~~~v~l~~p~--nptG--~~~~~~~l~~i~~~ 208 (301)
+.. ++++|.. .+.+ .-++.++|+++.++
T Consensus 81 ~~G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 81 TYSRID-VLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHSCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HcCCCC-EEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 334 4456552 2333 34688888877664
No 278
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=51.78 E-value=92 Score=25.03 Aligned_cols=34 Identities=29% Similarity=0.299 Sum_probs=22.6
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
....+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADL 44 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 3345677766655556777777788988876543
No 279
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=50.87 E-value=94 Score=24.86 Aligned_cols=66 Identities=12% Similarity=-0.038 Sum_probs=36.2
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++++
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 71 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVM 71 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHH
Confidence 34566666655555667777778898888765433333333333344455444322 3555555544
No 280
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=50.66 E-value=92 Score=24.68 Aligned_cols=67 Identities=18% Similarity=0.131 Sum_probs=38.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-.... ..++..+.++..+..+- -|.+.+++.+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 73 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFF 73 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHH
Confidence 3445677776655556677777788988887654433222 22334465666655433 3455555544
No 281
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=50.65 E-value=22 Score=28.22 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=26.4
Q ss_pred cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 179 KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 179 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
-.+.+++..-..|+.|.... +.++.+++++||+.+|.
T Consensus 158 l~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 158 LQPAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SCSBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 35666655455589999999 55666677799987764
No 282
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=50.64 E-value=99 Score=25.06 Aligned_cols=99 Identities=12% Similarity=0.074 Sum_probs=57.7
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEE-E--cCC------C-----CcchHHHHHhcCceEEEeecCCCCCCCCCHHHHH
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVL-L--PRP------G-----WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl-~--~~p------~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 174 (301)
-+++.+|+..+..++..+. +.|-.|. + ..+ . .......++..|++...+++...+. --.+.+.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~--~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKE--KEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCch--HHHHHHH
Confidence 4677888888887777655 4454443 2 111 1 1123567778899988887643211 2356666
Q ss_pred hhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 175 ALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 175 ~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
++++. ...+++ +|.+.+..++..+-++|.+.|+..+
T Consensus 84 ~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 84 RVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 66654 344444 6777777777888888888887655
No 283
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=50.59 E-value=77 Score=27.05 Aligned_cols=37 Identities=22% Similarity=0.138 Sum_probs=32.0
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCccc
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL 225 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~ 225 (301)
-++|.|...+.+++.++++.|+++|+-+++|--|++.
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~ 85 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDT 85 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 4778888899999999999999999999999766543
No 284
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=50.29 E-value=79 Score=25.83 Aligned_cols=94 Identities=18% Similarity=0.143 Sum_probs=49.2
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------Cc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NT 181 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~ 181 (301)
..+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.++++++. +.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDV-----TDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555555444666777778898888765444444444455454555554432 355555555432 34
Q ss_pred cEEEEcCCC--CCcc--cCCCHHHHHHHHH
Q 022213 182 AAMVIINPG--NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 182 ~~v~l~~p~--nptG--~~~~~~~l~~i~~ 207 (301)
..+ +++.. .+.+ ...+.++++++.+
T Consensus 104 D~l-VnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 104 DVL-FNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp CEE-EECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred CEE-EECCCCCCCCCChhhCCHHHHHHHHH
Confidence 544 44432 2212 2346666665443
No 285
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=49.85 E-value=1e+02 Score=24.97 Aligned_cols=96 Identities=18% Similarity=0.136 Sum_probs=48.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-....... +..+.++..+..+- -|.+.++++++.
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLLEAVK 94 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3345666666655556777778888988877644322222222 22355555554432 345566555432
Q ss_pred ----CccEEEEcCCCCCcc--cCCCHHHHHHHH
Q 022213 180 ----NTAAMVIINPGNPCG--NVFTYHHLQEIA 206 (301)
Q Consensus 180 ----~~~~v~l~~p~nptG--~~~~~~~l~~i~ 206 (301)
+...++-+--....+ ...+.++++++.
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 127 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVI 127 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHH
Confidence 345544332222112 234566665544
No 286
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=49.60 E-value=14 Score=33.23 Aligned_cols=28 Identities=21% Similarity=0.427 Sum_probs=24.8
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
+++.|..++.+++++|++.|+++++-||
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VI 112 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLI 112 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeee
Confidence 3466789999999999999999999887
No 287
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=49.36 E-value=36 Score=28.65 Aligned_cols=52 Identities=21% Similarity=0.239 Sum_probs=36.5
Q ss_pred CHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 169 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
..+.++++++...+.+++... |. +.++.+++.+.|+++++.++-.++...+.
T Consensus 83 ~~~~v~ea~~~Gi~~vVi~t~----G~--~~~~~~~l~~~A~~~gi~viGPNc~Gii~ 134 (294)
T 2yv1_A 83 AKDAVFEAIDAGIELIVVITE----HI--PVHDTMEFVNYAEDVGVKIIGPNTPGIAS 134 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCS----CC--CHHHHHHHHHHHHHHTCEEECSSCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEEcCCCceeec
Confidence 456667777777786554332 32 45678899999999999888888776544
No 288
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=49.25 E-value=93 Score=25.01 Aligned_cols=97 Identities=16% Similarity=0.098 Sum_probs=51.6
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
+....+++|.++...=..+.+.|.+.|.+|++..-.-..... .++..+.++..+..+- -|.+.+++.+++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAAL 84 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 344456677666655567777787889888876543332222 2233455666665433 355555554432
Q ss_pred ----CccEEEEcCC--CCCcccCCCHHHHHHHHH
Q 022213 180 ----NTAAMVIINP--GNPCGNVFTYHHLQEIAE 207 (301)
Q Consensus 180 ----~~~~v~l~~p--~nptG~~~~~~~l~~i~~ 207 (301)
+...++ ++. ..+.....+.+++++..+
T Consensus 85 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 85 DQFGKITVLV-NNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHSCCCEEE-ECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCCCCCHHHHHHHHH
Confidence 344444 443 122222466677765443
No 289
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=49.19 E-value=71 Score=26.05 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=22.2
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~ 137 (301)
....+++|.+++..=..+.+.|.+.|.+|++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence 34456666666555567777888889888865
No 290
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=49.15 E-value=66 Score=25.62 Aligned_cols=75 Identities=12% Similarity=0.091 Sum_probs=41.9
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--CccE
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAA 183 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~ 183 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-.......+....+...+..+. -+.+.+++.+++ +...
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHHhcCCCCE
Confidence 444567776665555667777888898888765544444444444333444333322 355666666543 3444
Q ss_pred EE
Q 022213 184 MV 185 (301)
Q Consensus 184 v~ 185 (301)
++
T Consensus 88 li 89 (249)
T 3f9i_A 88 LV 89 (249)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 291
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=49.03 E-value=1.1e+02 Score=24.98 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=50.0
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEeecCCCCCCCCCHHHHHhhccc---
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (301)
...+++|.|+...=..+.+.|.+.|.+|++..-.-....... ...+.++..+..+- -|.+.+++++++
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-----RAPPAVMAAVDQALK 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 345666666655556777788888988887654433322222 22355666655433 345555554432
Q ss_pred ---CccEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 022213 180 ---NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ---~~~~v~l~~p~-nptG--~~~~~~~l~~i~~ 207 (301)
+...++ ++.. ...+ ...+.+++++..+
T Consensus 102 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 102 EFGRIDILI-NCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCcCCCCCCcccCCHHHHHHHHH
Confidence 344443 4432 1111 2356677766544
No 292
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=48.42 E-value=1.4e+02 Score=26.30 Aligned_cols=89 Identities=15% Similarity=0.048 Sum_probs=44.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcC-CCCEEEEcCCCCcc---------------hHHH
Q 022213 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPY---------------YEGI 147 (301)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~Vl~~~p~~~~---------------~~~~ 147 (301)
.|+..-.+.--+|.+....+.-....+++|.+++.-=..+...|.. .|..|++..-.-.. ....
T Consensus 24 ~gc~~~v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~ 103 (405)
T 3zu3_A 24 TGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKF 103 (405)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHH
Confidence 3444433333345555433333344556666555444556667777 78887754211110 1223
Q ss_pred HHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 148 AQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 148 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
++..|.+...+..+- .|.+.+++++
T Consensus 104 ~~~~G~~a~~i~~Dv-----td~~~v~~~v 128 (405)
T 3zu3_A 104 AAQKGLYAKSINGDA-----FSDEIKQLTI 128 (405)
T ss_dssp HHHTTCCEEEEESCT-----TSHHHHHHHH
T ss_pred HHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 455677766665533 3555555544
No 293
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=48.36 E-value=47 Score=26.66 Aligned_cols=106 Identities=10% Similarity=0.115 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcc---hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCc
Q 022213 117 KQAVEVILSVLARPGANVLLPRPGWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (301)
Q Consensus 117 ~~al~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 193 (301)
++++..+ ..+...|.++++..|.-.. -..+....|.....+++. +.+++.+.+..+...|++.-.+.
T Consensus 43 T~Llr~~-~r~~~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~-------~~~di~~~i~~~~dvV~IDEaQF-- 112 (219)
T 3e2i_A 43 EELIRRL-RRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINIS-------KASEIMTHDLTNVDVIGIDEVQF-- 112 (219)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEEEC-----------CBTTBCCEEEEES-------SGGGGGGSCCTTCSEEEECCGGG--
T ss_pred HHHHHHH-HHHHHcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeC-------CHHHHHHHHhcCCCEEEEechhc--
Confidence 4455555 4444567788888776542 234556667666655542 22334443445667777776655
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcccc
Q 022213 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (301)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~ 238 (301)
++.+.++.+.+++ ..|+.||+=.--.+ |.++.|..+..+
T Consensus 113 ---f~~~~v~~l~~la-~~gi~Vi~~GLd~D--F~~~~F~~~~~L 151 (219)
T 3e2i_A 113 ---FDDEIVSIVEKLS-ADGHRVIVAGLDMD--FRGEPFEPMPKL 151 (219)
T ss_dssp ---SCTHHHHHHHHHH-HTTCEEEEEEESBC--TTSCBCTTHHHH
T ss_pred ---CCHHHHHHHHHHH-HCCCEEEEeecccc--cccCCCccHHHH
Confidence 4556677777777 67999987555444 335566554433
No 294
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=48.16 E-value=79 Score=23.23 Aligned_cols=107 Identities=12% Similarity=0.130 Sum_probs=61.9
Q ss_pred CCCCCEEEcCCH--HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCcc
Q 022213 105 LSADDVYVTLGC--KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182 (301)
Q Consensus 105 ~~~~~i~~t~g~--~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 182 (301)
++...++++.+. .+.+.-..+.+.+-|=+++.+. +....++..|+++..+.-..+.+...+...+.+.++++..
T Consensus 22 lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~----GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i 97 (143)
T 2yvq_A 22 IPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATE----ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSI 97 (143)
T ss_dssp CCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEH----HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSC
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECc----hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCc
Confidence 333347776665 5555556667766676666553 3345667788888777532222100000235555555555
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 183 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
.++++.|.. ...+..+-..|-+.|-+|++.++.
T Consensus 98 ~lVInt~~~---~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 98 DLVINLPNN---NTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp CEEEECCCC---CGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred eEEEECCCC---CCcCCccHHHHHHHHHHhCCCeEc
Confidence 566666643 123366778888889999998874
No 295
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=47.78 E-value=71 Score=26.17 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=22.9
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~ 137 (301)
+....+++|.+++..=..+.+.|.+.|.+|++.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE
Confidence 344456777666655567777888889888765
No 296
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=47.77 E-value=1e+02 Score=24.50 Aligned_cols=66 Identities=18% Similarity=0.072 Sum_probs=36.6
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCC-cchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.- ......++..+.++..+..+- -|.+.+++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 73 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-----SQPGDVEAFG 73 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHH
Confidence 34566776665555677777878898887654332 222223344455555555432 2455555544
No 297
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=47.32 E-value=79 Score=25.74 Aligned_cols=97 Identities=18% Similarity=0.009 Sum_probs=50.5
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC-CCcc---hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP-GWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p-~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (301)
+....+++|.|++..=..+.+.|.+.|.+|++..- .-.. ....+...+.++..+..+- -|.+.+++++++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-----SQESEVEALFAAV 100 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 34445677766665556777788888988876433 2111 1223334455666655433 355555554432
Q ss_pred -----CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 180 -----NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 -----~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
+...++ ++. ..+.+ ...+.++++++.+
T Consensus 101 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 101 IERWGRLDVLV-NNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444 443 22222 2356677665544
No 298
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=47.28 E-value=93 Score=25.79 Aligned_cols=96 Identities=19% Similarity=0.176 Sum_probs=50.5
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhccc---
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (301)
....+++|.+++..=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -|.+.++++++.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-----RHLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 344567776665555667777778898888765443333222 233455555555433 355566555432
Q ss_pred ---CccEEEEcCCC-CCccc--CCCHHHHHHHHH
Q 022213 180 ---NTAAMVIINPG-NPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 ---~~~~v~l~~p~-nptG~--~~~~~~l~~i~~ 207 (301)
+...++ ++.. ...+. ..+.+++++..+
T Consensus 105 ~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 105 LLGGVDVVF-SNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHSSCSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 344444 4432 22222 356666665443
No 299
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=46.93 E-value=1e+02 Score=25.79 Aligned_cols=95 Identities=15% Similarity=0.011 Sum_probs=49.6
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCC----------Ccc---hHHHHHhcCceEEEeecCCCCCCCCCHHHH
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG----------WPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~----------~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (301)
...+++|.|++..=..+.+.|.+.|.+|++..-. -.. ....+...+.++..+..+- -|.+.+
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v 101 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV-----ADWDQA 101 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT-----TSHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHH
Confidence 3456666666555566777788889888876432 111 2223344566666655432 355666
Q ss_pred Hhhccc------CccEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 022213 174 EALADK------NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 174 ~~~~~~------~~~~v~l~~p~-nptG--~~~~~~~l~~i~~ 207 (301)
+++++. +...+ +.+.. ...+ ...+.+++++..+
T Consensus 102 ~~~~~~~~~~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVL-VNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHHHHSCCCEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 555432 34444 44432 2222 2356666665443
No 300
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=46.78 E-value=41 Score=31.13 Aligned_cols=78 Identities=10% Similarity=0.043 Sum_probs=46.8
Q ss_pred CCCCEEEEcCCCCcch-------HHHHHhcCceEEEeecCC-CCCCCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCH
Q 022213 129 RPGANVLLPRPGWPYY-------EGIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTY 199 (301)
Q Consensus 129 ~~gd~Vl~~~p~~~~~-------~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~ 199 (301)
+++|.|++.....++. .......|++++...... .-....|.++|...++. +++-++..|-. .
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe--------~ 408 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGE--------V 408 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBC--------H
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCC--------H
Confidence 6899999998777764 233445677766432100 01112567777776643 57777766633 2
Q ss_pred HHHHHHHHHHHhCCC
Q 022213 200 HHLQEIAEMARKLRV 214 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~ 214 (301)
..+.+.++++++.|+
T Consensus 409 ~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 RHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHcCC
Confidence 236677777777664
No 301
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.56 E-value=85 Score=25.61 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=22.3
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
...+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 345667766655556777777788988876543
No 302
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=46.53 E-value=68 Score=26.12 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=22.5
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~ 138 (301)
....+++|.++...=..+.+.|.+.|.+|++..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 344566776665555677778888898887653
No 303
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=46.46 E-value=1e+02 Score=25.01 Aligned_cols=93 Identities=14% Similarity=0.098 Sum_probs=52.2
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc------Ccc
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTA 182 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~ 182 (301)
.+++|.|++..=..+.+.|.+.|-+|++.+-.-...... ...+.+...+..+- -|.+.+++.+++ +..
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~-~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF-AKERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HTTCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 467777766666777788888999988775443332222 33344555554432 345555554432 334
Q ss_pred EEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 022213 183 AMVIINP-GNPCG--NVFTYHHLQEIAEM 208 (301)
Q Consensus 183 ~v~l~~p-~nptG--~~~~~~~l~~i~~~ 208 (301)
. +++|. .++.+ .-++.++|+++.++
T Consensus 78 i-LVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 V-LVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp E-EEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred E-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4 44544 22222 24577888777664
No 304
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=46.43 E-value=1.3e+02 Score=25.33 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=22.5
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcC--CCCEEEEcC
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLAR--PGANVLLPR 138 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~--~gd~Vl~~~ 138 (301)
.....|++|.|+.-.-..++..|.+ .|..|.+..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~ 43 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLD 43 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEE
Confidence 3445688887665555666677777 788777553
No 305
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.34 E-value=86 Score=25.98 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=23.0
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
....+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3345677766655556777778888988877643
No 306
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=46.34 E-value=30 Score=29.02 Aligned_cols=76 Identities=9% Similarity=0.069 Sum_probs=46.6
Q ss_pred CcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 022213 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (301)
Q Consensus 141 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~ 220 (301)
|..+..+.+.....+..+-+.+ ....+.++++++...+.+++... |. +.++.+++.+.|+++++.++-.+
T Consensus 53 y~sl~el~~~~~~D~viI~tP~----~~~~~~~~ea~~~Gi~~iVi~t~----G~--~~~~~~~l~~~A~~~gv~liGPN 122 (288)
T 2nu8_A 53 FNTVREAVAATGATASVIYVPA----PFCKDSILEAIDAGIKLIITITE----GI--PTLDMLTVKVKLDEAGVRMIGPN 122 (288)
T ss_dssp ESSHHHHHHHHCCCEEEECCCG----GGHHHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHHHHTCEEECSS
T ss_pred cCCHHHHhhcCCCCEEEEecCH----HHHHHHHHHHHHCCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEEecC
Confidence 4444555543344444333222 14567777777777776554333 32 55678899999999999888777
Q ss_pred CCcccc
Q 022213 221 VYGHLT 226 (301)
Q Consensus 221 ~y~~~~ 226 (301)
+...+.
T Consensus 123 c~Gi~~ 128 (288)
T 2nu8_A 123 TPGVIT 128 (288)
T ss_dssp CCEEEE
T ss_pred Ccceec
Confidence 755433
No 307
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=46.19 E-value=1.1e+02 Score=24.50 Aligned_cols=67 Identities=15% Similarity=0.028 Sum_probs=34.9
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 73 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVD 73 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecC-----CCHHHHHHHHH
Confidence 34566666665555667777778898887654332222222233322233343322 35566665543
No 308
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=46.11 E-value=73 Score=25.89 Aligned_cols=96 Identities=14% Similarity=0.072 Sum_probs=50.2
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC-CCcc---hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRP-GWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p-~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
....+++|.+++..=..+.+.|.+.|.+|++..- .-.. ....++..+.++..+..+- -|.+.+++++++
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI-----RQVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3445666666655556777778888988876422 2111 1223344566666665533 355566555432
Q ss_pred ----CccEEEEcCCC-CCccc--CCCHHHHHHHHH
Q 022213 180 ----NTAAMVIINPG-NPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 ----~~~~v~l~~p~-nptG~--~~~~~~l~~i~~ 207 (301)
+...+ +.+.. .+.+. ..+.+++++..+
T Consensus 92 ~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 92 AHFGHLDIA-VSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHHSCCCEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 34444 44432 22222 346677766554
No 309
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=45.71 E-value=72 Score=26.90 Aligned_cols=98 Identities=10% Similarity=0.051 Sum_probs=54.0
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEE-EcCCC--CcchH---HHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVL-LPRPG--WPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK- 179 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl-~~~p~--~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (301)
...|++|.++-..-..++..|.+.|..|. +.... ...-. ..+...+++++..++ .|.+.+.+++++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl-------~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI-------NEQEAMEKILKEH 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT-------TCHHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec-------CCHHHHHHHHhhC
Confidence 34788877744444455566666665554 33322 11111 122345777666554 367888887763
Q ss_pred CccEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCC-CeEEE
Q 022213 180 NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLR-VMVVA 218 (301)
Q Consensus 180 ~~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~-~~ii~ 218 (301)
+...|+-+.. .|..| -..+++.|++.+ +-.++
T Consensus 83 ~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 83 EIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp TCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEe
Confidence 4566555433 34333 467888888887 54333
No 310
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=45.70 E-value=1.2e+02 Score=24.61 Aligned_cols=93 Identities=19% Similarity=0.121 Sum_probs=48.2
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhccc------
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (301)
.+++|.+++..=..+.+.|.+.|.+|++..-.-...... ++..+.+...+..+- -|.+.++++++.
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV-----TDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 456666655544666777778898888765433322222 233466666655432 345555554432
Q ss_pred CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 180 NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
+...++ ++. ..+.+ ...+.+++++..+
T Consensus 81 ~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 81 RIDVLV-NNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp CCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444 443 22222 2346666665444
No 311
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=45.64 E-value=14 Score=33.27 Aligned_cols=27 Identities=19% Similarity=0.426 Sum_probs=24.2
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 191 NPCGNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
+|.|..++.+++++|++.|+++++-||
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VI 109 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLI 109 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 456789999999999999999999887
No 312
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=45.44 E-value=1.2e+02 Score=24.51 Aligned_cols=99 Identities=10% Similarity=0.019 Sum_probs=51.7
Q ss_pred CCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc
Q 022213 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK 179 (301)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (301)
.+....+++|.|+...=..+.+.|.+.|.+|++..-.-.. ....++..+.++..+..+- -|.+.+++.+++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~ 100 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA-----ASESDFIEAIQT 100 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHH
Confidence 3455567777776665567777888889887765432221 1223344566666665533 345555554432
Q ss_pred ------CccEEEEcCCCCCc--ccCCCHHHHHHHHH
Q 022213 180 ------NTAAMVIINPGNPC--GNVFTYHHLQEIAE 207 (301)
Q Consensus 180 ------~~~~v~l~~p~npt--G~~~~~~~l~~i~~ 207 (301)
+...++-+--.... -...+.+++++..+
T Consensus 101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 34444433222221 22356666655433
No 313
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=45.24 E-value=1.2e+02 Score=24.36 Aligned_cols=68 Identities=19% Similarity=0.146 Sum_probs=36.5
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh---c-CceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR---K-QVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~---~-g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-.......+. . +.++..+..+- -|.+.++++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 77 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVE 77 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHH
Confidence 344567777665555677777778898887654332222222211 1 54555554432 34566655543
No 314
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=45.12 E-value=1.1e+02 Score=23.97 Aligned_cols=94 Identities=23% Similarity=0.178 Sum_probs=50.2
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCceEEEeecCCCCCCCCCHHHHHhhccc-----
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADK----- 179 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 179 (301)
.+++|.|+...=..+.+.|.+.|.+|++..-.-....... ...+.++..+..+- -|.+.+++++++
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 4667766655556677777788888887654433322222 23455666665432 366777776653
Q ss_pred -CccEEEEcCCCCCccc--CCCHHHHHHHHH
Q 022213 180 -NTAAMVIINPGNPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 -~~~~v~l~~p~nptG~--~~~~~~l~~i~~ 207 (301)
+...++-+--..+.+. ..+.+++++..+
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 3455443322222222 236666655433
No 315
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=45.05 E-value=1.1e+02 Score=25.47 Aligned_cols=52 Identities=13% Similarity=0.109 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccC
Q 022213 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEV 221 (301)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~ 221 (301)
++|..|...+.++......++++... .++.++++++.+.|++.|+-++++-.
T Consensus 126 Kdfi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvevh 177 (272)
T 3tsm_A 126 KDFLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEVH 177 (272)
T ss_dssp ESCCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 45667887887776666777665543 35678899999999999988777653
No 316
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=45.03 E-value=62 Score=26.35 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=51.3
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--CccEEE
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMV 185 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~ 185 (301)
..+++|.+++.-=..+.+.|.+.|-+|++.+-.-... .+..+.+...+..+- -|.+.+++.+++ +.. ++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iD-iL 82 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---HAPRHPRIRREELDI-----TDSQRLQRLFEALPRLD-VL 82 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEECCT-----TCHHHHHHHHHHCSCCS-EE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEecC-----CCHHHHHHHHHhcCCCC-EE
Confidence 4556666665555777778888998888765332221 122233444444432 355666666654 333 34
Q ss_pred EcCC-CCCcccCCCHHHHHHHHHH
Q 022213 186 IINP-GNPCGNVFTYHHLQEIAEM 208 (301)
Q Consensus 186 l~~p-~nptG~~~~~~~l~~i~~~ 208 (301)
++|. -+.....++.++|+++.++
T Consensus 83 VNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 83 VNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp EECCCCCCGGGGGSHHHHHHHHHH
T ss_pred EECCCCCCCcccCCHHHHHHHHHH
Confidence 5554 2333456777888776654
No 317
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=44.88 E-value=1.3e+02 Score=24.79 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=51.1
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCC------------Ccch---HHHHHhcCceEEEeecCCCCCCCCC
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG------------WPYY---EGIAQRKQVEVRHFDLLPERNWEVD 169 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~------------~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~ 169 (301)
+....+++|.+++..=..+.+.|.+.|.+|++..-. -... ...++..+.++..+..+- -|
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~ 100 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV-----RD 100 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC-----CC
Confidence 344456777666655567777788889888765322 0111 122334566666665533 35
Q ss_pred HHHHHhhccc------CccEEEEcCC-CCCcc---cCCCHHHHHHHHH
Q 022213 170 LDAVEALADK------NTAAMVIINP-GNPCG---NVFTYHHLQEIAE 207 (301)
Q Consensus 170 ~~~l~~~~~~------~~~~v~l~~p-~nptG---~~~~~~~l~~i~~ 207 (301)
.+.+++++++ +...++ ++. ....+ ...+.+++++..+
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVL-ANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEE-ECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEE-ECCCCCCCCCchhhCCHHHHHHHHH
Confidence 5566555432 345444 443 22222 2346777766554
No 318
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=44.56 E-value=15 Score=32.97 Aligned_cols=30 Identities=10% Similarity=0.192 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
+.++++++++.|+++|+-||.|-++-....
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 378999999999999999999999986554
No 319
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=44.28 E-value=1.2e+02 Score=24.73 Aligned_cols=94 Identities=13% Similarity=0.016 Sum_probs=48.5
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhccc-----
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK----- 179 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 179 (301)
..+++|.|+...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -|.+.+++++++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAVAAAVERF 99 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 3466666665555667777888898888765433322222 233455665555432 355555554432
Q ss_pred -CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 180 -NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 -~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
+...+ +++. ..+.+ ...+.++++++.+
T Consensus 100 g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 100 GPIGIL-VNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp CSCCEE-EECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCcEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 34444 4443 22222 2356666654433
No 320
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=44.17 E-value=24 Score=29.05 Aligned_cols=52 Identities=21% Similarity=0.325 Sum_probs=35.5
Q ss_pred CCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccC
Q 022213 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEV 221 (301)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~ 221 (301)
++|.+|.-++.++......++.+... .++.++++++++.|++.|..+++|-.
T Consensus 107 KDfi~~~~qi~ea~~~GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 107 KDFYIDTVQVKLASSVGADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp ECCCCSTHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred eeCCCCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 34666766666655455666555432 36667899999999999888887754
No 321
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=44.14 E-value=1.2e+02 Score=24.13 Aligned_cols=67 Identities=18% Similarity=0.141 Sum_probs=36.7
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---HhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.-....... ...+.++..+..+- -|.+.++++++
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~~~~~~~ 76 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV-----ADRQGVDAAVA 76 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHH
Confidence 345777776665556777778888988876543322222222 22354555555432 34556655443
No 322
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=43.90 E-value=1.2e+02 Score=24.26 Aligned_cols=95 Identities=16% Similarity=0.042 Sum_probs=49.3
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhccc----
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK---- 179 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 179 (301)
...+++|.|+...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -+.+.++++++.
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDL-----SHSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHHHHHHh
Confidence 34566666665555666777778898888765443332222 233455666655432 345555554432
Q ss_pred --CccEEEEcCCC-CCcc--cCCCHHHHHHHH
Q 022213 180 --NTAAMVIINPG-NPCG--NVFTYHHLQEIA 206 (301)
Q Consensus 180 --~~~~v~l~~p~-nptG--~~~~~~~l~~i~ 206 (301)
+...++-+.-. .+.+ ...+.+++++..
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 135 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALI 135 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHH
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHH
Confidence 34555433222 2222 235666665543
No 323
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=43.79 E-value=1.2e+02 Score=24.23 Aligned_cols=96 Identities=11% Similarity=0.124 Sum_probs=49.1
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH---hcCceEEEeecCCCCCCCCCHHHHHhhccc---
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ---RKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+- -|.+.+++++++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMIEQIDE 79 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 33456666665555566777788889888876544333322222 2344555555432 345555554432
Q ss_pred ---CccEEEEcCCC-CCc--ccCCCHHHHHHHHH
Q 022213 180 ---NTAAMVIINPG-NPC--GNVFTYHHLQEIAE 207 (301)
Q Consensus 180 ---~~~~v~l~~p~-npt--G~~~~~~~l~~i~~ 207 (301)
+...++ ++.. ... -...+.+++++..+
T Consensus 80 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3imf_A 80 KFGRIDILI-NNAAGNFICPAEDLSVNGWNSVIN 112 (257)
T ss_dssp HHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 344444 4332 111 12456666665544
No 324
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=43.50 E-value=93 Score=25.34 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=22.6
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~ 138 (301)
....+++|.++...=..+.+.|.+.|.+|++..
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 344566776665555677778888898888753
No 325
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=43.45 E-value=74 Score=21.52 Aligned_cols=91 Identities=15% Similarity=0.084 Sum_probs=51.2
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEE
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 186 (301)
.+|+++.++.-+.. ++..+.+.| ..|.+.+..-... ..+...+......++ .+.+.+++.++ +...++.
T Consensus 6 ~~v~I~G~G~iG~~-~~~~l~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~d~-------~~~~~~~~~~~-~~d~vi~ 75 (118)
T 3ic5_A 6 WNICVVGAGKIGQM-IAALLKTSSNYSVTVADHDLAAL-AVLNRMGVATKQVDA-------KDEAGLAKALG-GFDAVIS 75 (118)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHCSSEEEEEEESCHHHH-HHHHTTTCEEEECCT-------TCHHHHHHHTT-TCSEEEE
T ss_pred CeEEEECCCHHHHH-HHHHHHhCCCceEEEEeCCHHHH-HHHHhCCCcEEEecC-------CCHHHHHHHHc-CCCEEEE
Confidence 35766666555544 444555567 5666665443322 222344555544433 35677777764 5677776
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
+.|... -..+++.|.+.++..+
T Consensus 76 ~~~~~~---------~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 76 AAPFFL---------TPIIAKAAKAAGAHYF 97 (118)
T ss_dssp CSCGGG---------HHHHHHHHHHTTCEEE
T ss_pred CCCchh---------hHHHHHHHHHhCCCEE
Confidence 664321 3677788888887654
No 326
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=43.09 E-value=1.2e+02 Score=23.99 Aligned_cols=68 Identities=19% Similarity=0.078 Sum_probs=38.6
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -|.+.+++.++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 78 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDV-----SDPESAKAMAD 78 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHH
Confidence 444566776665555677777888898888765443332222 233455666665533 34555555443
No 327
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=43.09 E-value=95 Score=22.67 Aligned_cols=90 Identities=7% Similarity=-0.028 Sum_probs=46.2
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hcCceEEEeecCCCCCCCCCHHHHHhhcccCccE
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (301)
....+|++..++.-+...+ ..|...|-.|.+.+..-... ..++ ..|......+ . .+.+.+.+.--.+...
T Consensus 17 ~~~~~v~IiG~G~iG~~la-~~L~~~g~~V~vid~~~~~~-~~~~~~~g~~~~~~d--~-----~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIA-NLASSSGHSVVVVDKNEYAF-HRLNSEFSGFTVVGD--A-----AEFETLKECGMEKADM 87 (155)
T ss_dssp CCCCEEEEECCSHHHHHHH-HHHHHTTCEEEEEESCGGGG-GGSCTTCCSEEEESC--T-----TSHHHHHTTTGGGCSE
T ss_pred cCCCcEEEECCCHHHHHHH-HHHHhCCCeEEEEECCHHHH-HHHHhcCCCcEEEec--C-----CCHHHHHHcCcccCCE
Confidence 3455777776666666444 34445676776665443322 2222 3454433211 1 3455565541234677
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 022213 184 MVIINPGNPCGNVFTYHHLQEIAEMARK 211 (301)
Q Consensus 184 v~l~~p~nptG~~~~~~~l~~i~~~~~~ 211 (301)
++++.++. +....++..+++
T Consensus 88 Vi~~~~~~--------~~~~~~~~~~~~ 107 (155)
T 2g1u_A 88 VFAFTNDD--------STNFFISMNARY 107 (155)
T ss_dssp EEECSSCH--------HHHHHHHHHHHH
T ss_pred EEEEeCCc--------HHHHHHHHHHHH
Confidence 77776642 235566666665
No 328
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=43.06 E-value=1.3e+02 Score=24.21 Aligned_cols=98 Identities=23% Similarity=0.160 Sum_probs=49.5
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---HhcC-ceEEEeecCCCCCCCCCHHHHHhhccc-
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA---QRKQ-VEVRHFDLLPERNWEVDLDAVEALADK- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-.-....... +..+ .++..+..+- -|.+.++++++.
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV-----SDRAQCDALAGRA 82 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC-----CCHHHHHHHHHHH
Confidence 34456777777665556777778888988887654433322222 2223 3455554432 345555554432
Q ss_pred -----CccEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 022213 180 -----NTAAMVIINPGNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 -----~~~~v~l~~p~nptG--~~~~~~~l~~i~~ 207 (301)
+...++-+--..+.+ ...+.+++++..+
T Consensus 83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 345544332222222 2346666655443
No 329
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=43.05 E-value=90 Score=25.00 Aligned_cols=36 Identities=22% Similarity=0.088 Sum_probs=23.3
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
...+++|.|++..=..+.+.|.+.|.+|++..-.-.
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 42 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQ 42 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 345666666655556677777778888887654433
No 330
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=43.02 E-value=1.2e+02 Score=24.60 Aligned_cols=67 Identities=19% Similarity=0.104 Sum_probs=36.4
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.++++++
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 72 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVFA 72 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHH
Confidence 34566776665555677777778898887764332233333333333444444332 34555555443
No 331
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=43.01 E-value=1e+02 Score=24.86 Aligned_cols=96 Identities=15% Similarity=0.108 Sum_probs=50.9
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhccc---
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -|.+.+++.+++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDI-----TDDAQVAHLVDETMK 84 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 344567777666555677777888898888765443332222 233455666665433 345555554432
Q ss_pred ---CccEEEEcCC-C-CCcc--cCCCHHHHHHHHH
Q 022213 180 ---NTAAMVIINP-G-NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ---~~~~v~l~~p-~-nptG--~~~~~~~l~~i~~ 207 (301)
+...++ ++. . .+.+ ...+.+++++..+
T Consensus 85 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 85 AYGRVDVVI-NNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp HTSCCSEEE-ECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCcEEE-ECCCCCCCCCCchhCCHHHHHHHHH
Confidence 344444 333 1 1222 2456666666543
No 332
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=42.92 E-value=1.1e+02 Score=28.88 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=58.4
Q ss_pred CCCCCCEEEcCCHHHHHHHHHHHhcC---CC--CEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 104 KLSADDVYVTLGCKQAVEVILSVLAR---PG--ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~---~g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
.++++.|.++.++..++...+++|.+ .+ ...+...|.|.. +-..+++ ..+--+..+.+++.++
T Consensus 42 ~i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~~----------RG~mlD~--sR~~f~~~~~ik~~id 109 (627)
T 2epl_X 42 EGRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYED----------LAYMADC--SRNAVLNLSSAKKMIE 109 (627)
T ss_dssp EEETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCSE----------EEEEEEC--SSSCCBCHHHHHHHHH
T ss_pred EEeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCCc----------cceEEec--CCCCCCCHHHHHHHHH
Confidence 34566788876666666666655532 22 245556666642 2233443 1220156666666554
Q ss_pred c------CccEEEEc----CCCCC----cccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 179 K------NTAAMVII----NPGNP----CGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 179 ~------~~~~v~l~----~p~np----tG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
. +.--+-++ .+..| .|..++.+++++|++.|+++++-||-
T Consensus 110 ~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 110 VLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 2 11111111 11222 46689999999999999999998863
No 333
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=42.82 E-value=28 Score=29.84 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=31.8
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCccc
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL 225 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~ 225 (301)
-+||.+...+.++..++++.|+++|+-+++|--|++.
T Consensus 49 ~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~ 85 (334)
T 1fob_A 49 WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDT 85 (334)
T ss_dssp CSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred EECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 3678888899999999999999999999999777653
No 334
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=42.45 E-value=84 Score=24.38 Aligned_cols=97 Identities=15% Similarity=0.049 Sum_probs=52.6
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 187 (301)
..|++|.++.-.=..+++.|.+.|.+|.+..-.-...... ..++++...++ .|.+.++++++ +..+|+.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl-------~d~~~~~~~~~-~~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--NEHLKVKKADV-------SSLDEVCEVCK-GADAVISA 74 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--CTTEEEECCCT-------TCHHHHHHHHT-TCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--cCceEEEEecC-------CCHHHHHHHhc-CCCEEEEe
Confidence 3577777655555677777777888877654332211000 02333333222 46788888776 46665544
Q ss_pred CCC---CCcccCCCHHHHHHHHHHHHhCCC
Q 022213 188 NPG---NPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 188 ~p~---nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
... ++.-...+......+++.|++.++
T Consensus 75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 104 (227)
T 3dhn_A 75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGV 104 (227)
T ss_dssp CCC------CCSHHHHHHHHHHHHHHHTTC
T ss_pred CcCCCCChhHHHHHHHHHHHHHHHHHHhCC
Confidence 321 111111133456788888888875
No 335
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=42.43 E-value=1.4e+02 Score=24.29 Aligned_cols=96 Identities=22% Similarity=0.140 Sum_probs=49.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhcCceEEEeecCCCCCCCCCHHHHHhhccc---
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-..... .+...+.+...+..+- -|.+.+++.+++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVESTLK 101 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 34456666666555567777788889888876543332222 2233444444444422 355555554432
Q ss_pred ---CccEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 022213 180 ---NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ---~~~~v~l~~p~-nptG--~~~~~~~l~~i~~ 207 (301)
+...+ +.+.. ...+ ...+.+++++..+
T Consensus 102 ~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 102 EFGALNVL-VNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp HHSCCCEE-EECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 34444 44432 2222 2356676665443
No 336
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=42.43 E-value=1.5e+02 Score=24.73 Aligned_cols=94 Identities=13% Similarity=-0.037 Sum_probs=49.5
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEE
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV 185 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 185 (301)
....|++|.++.-.=..++..|.+.|..|+...-.-.. .++..+..++ .|.+.+++++. +...|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl-------~d~~~~~~~~~-~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSL-------EDGQALSDAIM-GVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCT-------TCHHHHHHHHT-TCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCc-------CCHHHHHHHHh-CCCEEE
Confidence 34578888775555556666777777666654222111 3444444443 46777887776 466655
Q ss_pred EcCC-CCCcccCC------CHHHHHHHHHHHHhCCC
Q 022213 186 IINP-GNPCGNVF------TYHHLQEIAEMARKLRV 214 (301)
Q Consensus 186 l~~p-~nptG~~~------~~~~l~~i~~~~~~~~~ 214 (301)
-+.. ..++.... +..-...+++.|++.++
T Consensus 83 h~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 118 (347)
T 4id9_A 83 HLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGV 118 (347)
T ss_dssp ECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4432 22221110 01123668888888775
No 337
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=42.35 E-value=1.3e+02 Score=24.06 Aligned_cols=66 Identities=24% Similarity=0.100 Sum_probs=35.8
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHHh---c-CceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY-YEGIAQR---K-QVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~-~~~~~~~---~-g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
..+++|.++...=..+.+.|.+.|.+|++..-.-.. .....+. . +.++..+..+- -|.+.++++++
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 75 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVD 75 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHH
Confidence 346666666555567777777889888876543332 2222221 1 54555554432 35566655543
No 338
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=42.33 E-value=83 Score=26.26 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhhCCCCCCCCCEEEcCCH---HHHHHHHHHHhcCCC-CEEEEcCCCCc
Q 022213 88 PARRAIADYLSRDLPYKLSADDVYVTLGC---KQAVEVILSVLARPG-ANVLLPRPGWP 142 (301)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~---~~al~~~~~~l~~~g-d~Vl~~~p~~~ 142 (301)
+=|+++.+...+..+ ..-.|+++.|+ .++++.+-++- +-| |.|++..|.|.
T Consensus 54 ~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~ 108 (292)
T 2ojp_A 54 DEHADVVMMTLDLAD---GRIPVIAGTGANATAEAISLTQRFN-DSGIVGCLTVTPYYN 108 (292)
T ss_dssp HHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHTT-TSSCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHhC---CCCcEEEecCCccHHHHHHHHHHHH-hcCCCEEEECCCCCC
Confidence 445555555443211 12247776554 56666555443 344 99999999886
No 339
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=42.12 E-value=44 Score=28.11 Aligned_cols=53 Identities=23% Similarity=0.325 Sum_probs=37.8
Q ss_pred CCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
...+.++++++...+.+++... | ++.++.+++.+.|+++++.++-.++...+.
T Consensus 83 ~~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~gi~viGPNc~Gii~ 135 (297)
T 2yv2_A 83 FAPDAVYEAVDAGIRLVVVITE----G--IPVHDTMRFVNYARQKGATIIGPNCPGAIT 135 (297)
T ss_dssp GHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECSSSCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEcCCCCeeEc
Confidence 4567777777777886555332 3 245678899999999999888788776544
No 340
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=42.08 E-value=1.2e+02 Score=23.74 Aligned_cols=68 Identities=13% Similarity=0.146 Sum_probs=36.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----cCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.++...-..+.+.|.+.|.+|++..-.-.......+. .+.++..+..+- -|.+.++++++
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 77 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFE 77 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHH
Confidence 344567776665555667777777888887654332222222111 344555554432 35566666553
No 341
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=41.81 E-value=1.3e+02 Score=24.00 Aligned_cols=34 Identities=29% Similarity=0.157 Sum_probs=22.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
....+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSR 39 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 3345666666655556777777788888876543
No 342
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=41.70 E-value=19 Score=32.53 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 37899999999999999999999987653
No 343
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=41.70 E-value=1e+02 Score=24.75 Aligned_cols=97 Identities=13% Similarity=-0.012 Sum_probs=46.8
Q ss_pred CCCCEEEcCCH-HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----cCceEEEeecCCCCCCCCCHHHHHhhccc-
Q 022213 106 SADDVYVTLGC-KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDLLPERNWEVDLDAVEALADK- 179 (301)
Q Consensus 106 ~~~~i~~t~g~-~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (301)
....+++|.++ +..=..+.+.|.+.|.+|++..-.-.......+. .+.++..+..+- -|.+.+++.+++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV-----TSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC-----CCHHHHHHHHHHH
Confidence 34457777764 4333555666777888888765443332222222 223455554432 245555554432
Q ss_pred -----CccEEEEcCCCCCccc--CCCHHHHHHHHH
Q 022213 180 -----NTAAMVIINPGNPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 -----~~~~v~l~~p~nptG~--~~~~~~l~~i~~ 207 (301)
+...++-+--..+.+. ..+.+++++..+
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLN 130 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3444443322222222 346666655443
No 344
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=41.60 E-value=1e+02 Score=25.73 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=50.0
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCC-------Cc-----ch---HHHHHhcCceEEEeecCCCCCCCCCH
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG-------WP-----YY---EGIAQRKQVEVRHFDLLPERNWEVDL 170 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~-------~~-----~~---~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (301)
....+++|.++...=..+.+.|.+.|.+|++.+-. +. .. ...+...+.++..+..+- -|.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~ 119 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV-----RDL 119 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-----CCH
Confidence 33456666666555567777888889888765322 11 11 122334566666665533 355
Q ss_pred HHHHhhccc------CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 171 DAVEALADK------NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 171 ~~l~~~~~~------~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
+.+++++++ +..+++ ++. ....+ ...+.++++++.+
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lV-nnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILV-SNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 565555432 345444 443 22222 2446677765544
No 345
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=41.57 E-value=68 Score=25.59 Aligned_cols=106 Identities=9% Similarity=0.161 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcc-h--HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCc
Q 022213 117 KQAVEVILSVLARPGANVLLPRPGWPY-Y--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (301)
Q Consensus 117 ~~al~~~~~~l~~~gd~Vl~~~p~~~~-~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~npt 193 (301)
++++..+.+. ...|.+|++..|.-.. | ..+....|.....++... .+++.+.+..+...|++.-.+.
T Consensus 43 T~lL~~a~r~-~~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~~-------~~~~~~~~~~~~dvViIDEaQF-- 112 (214)
T 2j9r_A 43 EELIRRVRRT-QFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA-------SKDIFKHITEEMDVIAIDEVQF-- 112 (214)
T ss_dssp HHHHHHHHHH-HHTTCCEEEEECC-----------------CCEEECSS-------GGGGGGGCCSSCCEEEECCGGG--
T ss_pred HHHHHHHHHH-HHCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecCC-------HHHHHHHHhcCCCEEEEECccc--
Confidence 4555555555 4567888888776542 2 234455566555444421 1233333333456777766655
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCcccc
Q 022213 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (301)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~ 238 (301)
++.+.++.+.+++. .++.||+=.--.+ |.++.|.+...+
T Consensus 113 ---~~~~~V~~l~~l~~-~~~~Vi~~Gl~~D--F~~~~F~~~~~L 151 (214)
T 2j9r_A 113 ---FDGDIVEVVQVLAN-RGYRVIVAGLDQD--FRGLPFGQVPQL 151 (214)
T ss_dssp ---SCTTHHHHHHHHHH-TTCEEEEEECSBC--TTSCBCTTHHHH
T ss_pred ---CCHHHHHHHHHHhh-CCCEEEEEecccc--cccCccccHHHH
Confidence 55566755555554 4888886444333 334555554433
No 346
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=41.47 E-value=1.3e+02 Score=23.77 Aligned_cols=67 Identities=21% Similarity=0.061 Sum_probs=35.8
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceE-EEeecCCCCCCCCCHHHHHhhc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEV-RHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
....+++|.++...-..+.+.|.+.|.+|++..-.-.......+..+.+. ..+..+- -|.+.+++++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAA 77 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHH
Confidence 34456777666555567777777888888766433222223333333333 3343322 3556666554
No 347
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=41.35 E-value=1.3e+02 Score=24.19 Aligned_cols=97 Identities=12% Similarity=0.050 Sum_probs=51.9
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCC-c--ch---HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-P--YY---EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~-~--~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
+....+++|.|++..=..+.+.|.+.|.+|++..-.- . .. ...++..+.++..+..+- -|.+.+++.++
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 83 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL-----SNEEEVAKLFD 83 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCC-----CSHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHH
Confidence 3445577777766655777788888898888743211 1 11 122233466666666543 35566655543
Q ss_pred c------CccEEEEcCCC-CCccc--CCCHHHHHHHHH
Q 022213 179 K------NTAAMVIINPG-NPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 179 ~------~~~~v~l~~p~-nptG~--~~~~~~l~~i~~ 207 (301)
+ +.. +++++.. ...+. ..+.++++++.+
T Consensus 84 ~~~~~~g~iD-~lvnnAg~~~~~~~~~~~~~~~~~~~~ 120 (262)
T 3ksu_A 84 FAEKEFGKVD-IAINTVGKVLKKPIVETSEAEFDAMDT 120 (262)
T ss_dssp HHHHHHCSEE-EEEECCCCCCSSCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCC-EEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2 233 3444442 22222 356777776554
No 348
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=41.15 E-value=19 Score=32.90 Aligned_cols=28 Identities=25% Similarity=0.380 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHL 225 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~ 225 (301)
+.++++++++.|+++|+-||.|-++-..
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 4688999999999999999999998754
No 349
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=41.13 E-value=90 Score=25.34 Aligned_cols=95 Identities=13% Similarity=0.060 Sum_probs=49.2
Q ss_pred CEEEcCCHHHHHHHHHHHhcCC-CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEc
Q 022213 109 DVYVTLGCKQAVEVILSVLARP-GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 187 (301)
.|++|.++...=..++..|.+. |..|.+..-.-... ..+...+++++..++ .|.+.++++++ ....|+.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~~v~~~~~D~-------~d~~~l~~~~~-~~d~vi~~ 72 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-PDDWRGKVSVRQLDY-------FNQESMVEAFK-GMDTVVFI 72 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-CGGGBTTBEEEECCT-------TCHHHHHHHTT-TCSEEEEC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-HHhhhCCCEEEEcCC-------CCHHHHHHHHh-CCCEEEEe
Confidence 3666665433333444446654 76655432211111 111234555555443 46788888776 45666554
Q ss_pred CC-CCCcccCCCHHHHHHHHHHHHhCCC
Q 022213 188 NP-GNPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 188 ~p-~nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
.. .++.. .+....+.+++.|++.++
T Consensus 73 a~~~~~~~--~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 73 PSIIHPSF--KRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CCCCCSHH--HHHHHHHHHHHHHHHTTC
T ss_pred CCCCccch--hhHHHHHHHHHHHHHcCC
Confidence 33 22211 123456788999988875
No 350
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=41.13 E-value=1.3e+02 Score=24.72 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=49.1
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcC
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 188 (301)
+|++|.++.-.-..++..|.+.|..|....-. ..... +. +++++..++ . .+.++++++ +...|+-+.
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~-~~--~~~~~~~Dl-------~-~~~~~~~~~-~~d~Vih~a 70 (311)
T 3m2p_A 4 KIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA-IN--DYEYRVSDY-------T-LEDLINQLN-DVDAVVHLA 70 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC--------CCEEEECCC-------C-HHHHHHHTT-TCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc-CC--ceEEEEccc-------c-HHHHHHhhc-CCCEEEEcc
Confidence 57777655444456666777778777755433 32222 22 555544332 2 577777776 566665443
Q ss_pred C-CCCc---cc-CCCHHHHHHHHHHHHhCCC
Q 022213 189 P-GNPC---GN-VFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 189 p-~npt---G~-~~~~~~l~~i~~~~~~~~~ 214 (301)
. .++. -. ..+......+++.|++.++
T Consensus 71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~ 101 (311)
T 3m2p_A 71 ATRGSQGKISEFHDNEILTQNLYDACYENNI 101 (311)
T ss_dssp CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2 2111 11 1122345788888888874
No 351
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=41.07 E-value=20 Score=31.99 Aligned_cols=29 Identities=21% Similarity=0.187 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 37899999999999999999999987644
No 352
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=40.99 E-value=1.3e+02 Score=23.69 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=21.6
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
...+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 345666666555556677777778888776543
No 353
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=40.94 E-value=20 Score=31.56 Aligned_cols=30 Identities=20% Similarity=0.151 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
+.++++++++.|+++|+-||.|-++-....
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 96 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRCA 96 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcccC
Confidence 478999999999999999999999886543
No 354
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=40.80 E-value=20 Score=32.42 Aligned_cols=29 Identities=28% Similarity=0.233 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 37899999999999999999999987654
No 355
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=40.61 E-value=65 Score=27.66 Aligned_cols=103 Identities=12% Similarity=0.150 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhcC-CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHH-H----hh--ccc-CccEEEEc
Q 022213 117 KQAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV-E----AL--ADK-NTAAMVII 187 (301)
Q Consensus 117 ~~al~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l-~----~~--~~~-~~~~v~l~ 187 (301)
+-++..+..+..+ +|.+++..+.........++..|+....+-+... .+.+++ . .+ +.+ +++.+++.
T Consensus 43 tL~Lq~~~~~~~~g~g~~vlyId~E~s~~~~ra~~lGvd~d~llv~~~----~~~E~~~l~i~~~l~~i~~~~~~lvVID 118 (333)
T 3io5_A 43 NFGLTMVSSYMRQYPDAVCLFYDSEFGITPAYLRSMGVDPERVIHTPV----QSLEQLRIDMVNQLDAIERGEKVVVFID 118 (333)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEESSCCCCHHHHHHTTCCGGGEEEEEC----SBHHHHHHHHHHHHHTCCTTCCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCceEEEEeccchhhHHHHHHhCCCHHHeEEEcC----CCHHHHHHHHHHHHHHhhccCceEEEEe
Confidence 3345554444433 4677776655544333456777765322222111 133333 2 12 333 56777876
Q ss_pred CCCCCc------cc--------CCC----HHHHHHHHHHHHhCCCeE-EEccCCc
Q 022213 188 NPGNPC------GN--------VFT----YHHLQEIAEMARKLRVMV-VADEVYG 223 (301)
Q Consensus 188 ~p~npt------G~--------~~~----~~~l~~i~~~~~~~~~~i-i~D~~y~ 223 (301)
+...-. |. +.- .+.+++|..+++++|+.+ ++..++.
T Consensus 119 SI~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~tNQV~k 173 (333)
T 3io5_A 119 SLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHTYE 173 (333)
T ss_dssp CSTTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTCEEEEEEEC--
T ss_pred cccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECCeee
Confidence 664432 11 111 123566777899999865 4444443
No 356
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=40.44 E-value=1.4e+02 Score=23.97 Aligned_cols=96 Identities=16% Similarity=0.143 Sum_probs=47.9
Q ss_pred CEEEcCCHHHHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEE
Q 022213 109 DVYVTLGCKQAVEVILSVLARP--GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 186 (301)
.|++|.++...-..++..|.+. |..|....-.-.... .+...+++++..++ .|.+.+.++++ +...++-
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~D~-------~d~~~l~~~~~-~~d~vi~ 72 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLADQGVEVRHGDY-------NQPESLQKAFA-GVSKLLF 72 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEE
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHhhcCCeEEEecc-------CCHHHHHHHHh-cCCEEEE
Confidence 4667666444445566666665 755554322111111 12234555554443 35677777765 3555554
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 022213 187 INPGNPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
+....+. ...+......+++.|++.++
T Consensus 73 ~a~~~~~-~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 73 ISGPHYD-NTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CCCCCSC-HHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCcC-chHHHHHHHHHHHHHHHcCC
Confidence 4332221 11123345677788877764
No 357
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=40.32 E-value=18 Score=34.72 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
.++++++++.|+++|+-||.|-+|-...
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 6899999999999999999999987543
No 358
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=40.32 E-value=20 Score=32.74 Aligned_cols=29 Identities=24% Similarity=0.234 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 47899999999999999999999987654
No 359
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=40.10 E-value=21 Score=31.84 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 47899999999999999999999987654
No 360
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=39.99 E-value=1.5e+02 Score=24.06 Aligned_cols=67 Identities=18% Similarity=0.060 Sum_probs=35.5
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.-...... ++..+.++..+..+- -|.+.++++++
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 91 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV-----RSVPEIEALVA 91 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHH
Confidence 34566666665555667777778888877654332222222 222355555554432 34555555443
No 361
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=39.91 E-value=28 Score=31.95 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccccC
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFG 228 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~ 228 (301)
+.++++++++.|+++|+-||.|-++-....+
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~ 121 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMNRG 121 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcCCC
Confidence 3789999999999999999999999875543
No 362
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=39.68 E-value=1.5e+02 Score=23.88 Aligned_cols=97 Identities=16% Similarity=0.032 Sum_probs=49.6
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----cC-ceEEEeecCCCCCCCCCHHHHHhhccc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----KQ-VEVRHFDLLPERNWEVDLDAVEALADK 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (301)
+....+++|.+++..=..+.+.|.+.|.+|++..-.-.......+. .+ .++..+..+- -|.+.+++.++.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEA 80 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHH
Confidence 3444567777666555677778888898888765443322222221 22 2355554432 345555554432
Q ss_pred ------CccEEEEcCC-CCCccc--CCCHHHHHHHHH
Q 022213 180 ------NTAAMVIINP-GNPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 ------~~~~v~l~~p-~nptG~--~~~~~~l~~i~~ 207 (301)
+...+ +++. ..+.+. ..+.+++++..+
T Consensus 81 ~~~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 116 (265)
T 3lf2_A 81 CERTLGCASIL-VNNAGQGRVSTFAETTDEAWSEELQ 116 (265)
T ss_dssp HHHHHCSCSEE-EECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 34444 3443 222222 356677665544
No 363
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=39.52 E-value=22 Score=32.22 Aligned_cols=29 Identities=24% Similarity=0.216 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 37899999999999999999999987653
No 364
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=39.43 E-value=27 Score=29.58 Aligned_cols=100 Identities=21% Similarity=0.096 Sum_probs=56.9
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEee--cCCCCCCCCCHHHHHhhcccCccEEEE
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD--LLPERNWEVDLDAVEALADKNTAAMVI 186 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~v~l 186 (301)
+++.|++ .++..+- .+ ++++|++-.-.+.++. +.+..|.+++.++ ..-..-..+.++++.......+.+.++
T Consensus 121 D~v~TSs--na~~~v~-~~--~~~~iif~pD~~Lg~~-l~~~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~~~P~a~v~ 194 (300)
T 1wzu_A 121 DVTVTSA--NAVEVVK-KL--DSDVVIFGPDKNLAHY-VAKMTGKKIIPVPSKGHCYVHQKFTLDDVERAKKLHPNAKLM 194 (300)
T ss_dssp SEEECTT--THHHHHH-TC--SCSEEEEESCHHHHHH-HHHHHCCEEEEC-----------CCHHHHHHHHHHCTTCEEE
T ss_pred CEEEchH--HHHHHHH-hC--CCCeEEEECChhHHHH-HHHHcCCeEEECCCCCcCCCcccCCHHHHHHHHHHCCCCEEE
Confidence 4555544 3444443 33 6777776655555442 3334477776655 111111247889999988888999999
Q ss_pred cCCCCCccc------CCCHHHHHHHHHHHHhCCCeEE
Q 022213 187 INPGNPCGN------VFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 187 ~~p~nptG~------~~~~~~l~~i~~~~~~~~~~ii 217 (301)
.||-.|.-+ +-| =..|++.+++..-++|
T Consensus 195 ~HPEc~~~v~~~aD~vgS---T~~ii~~~~~~~~~iv 228 (300)
T 1wzu_A 195 IHPECIPEVQEKADIIAS---TGGMIKRACEWDEWVV 228 (300)
T ss_dssp ECTTSCHHHHHTCSEECC---HHHHHHHGGGCSEEEE
T ss_pred ECCCCCHHHHhhccccCC---HHHHHHHHHhCCCEEE
Confidence 999776321 223 3566777766653444
No 365
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=39.20 E-value=1e+02 Score=25.12 Aligned_cols=35 Identities=23% Similarity=0.220 Sum_probs=22.9
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG 140 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~ 140 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 33456666665555566777777889888876543
No 366
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=39.09 E-value=24 Score=32.00 Aligned_cols=29 Identities=21% Similarity=0.326 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 37899999999999999999999987644
No 367
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=38.88 E-value=22 Score=31.96 Aligned_cols=29 Identities=28% Similarity=0.379 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 36899999999999999999999987644
No 368
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=38.79 E-value=1.4e+02 Score=23.45 Aligned_cols=65 Identities=17% Similarity=-0.034 Sum_probs=33.6
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----cCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
.+++|.++...-..+.+.|.+.|.+|++..-.-.......+. .+.++..+..+- -|.+.++++++
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 72 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIA 72 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHH
Confidence 356666555444666677777888877664332222222221 233444444422 35566665553
No 369
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=38.78 E-value=70 Score=27.38 Aligned_cols=24 Identities=21% Similarity=0.187 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCc
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYG 223 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~ 223 (301)
+.++++++.|.++|+.+|+|--+.
T Consensus 83 ~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 83 KRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp HHHHHHHHHHHTTTCEEEECCCSC
T ss_pred HHHHHHHHHHHHCCCEEEEecCCc
Confidence 566777777777777777775544
No 370
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=38.71 E-value=20 Score=23.98 Aligned_cols=25 Identities=16% Similarity=0.157 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCCCeEEEccCCcccc
Q 022213 202 LQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 202 l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
-++|.++++++|+.++.|..-....
T Consensus 29 A~~I~~~A~e~~VPi~e~~~LAr~L 53 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPLARSL 53 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHHHHH
Confidence 5788888999999999998765433
No 371
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=38.65 E-value=1.5e+02 Score=23.84 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=43.3
Q ss_pred EEEcCCHHHHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEc
Q 022213 110 VYVTLGCKQAVEVILSVLARP--GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187 (301)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 187 (301)
|++|.++...-..+++.|.+. |..|....-.-..... +...+++++..++ .|.+.++++++ ....++.+
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~-------~d~~~~~~~~~-~~d~vi~~ 72 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LAAQGITVRQADY-------GDEAALTSALQ-GVEKLLLI 72 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEEC
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hhcCCCeEEEcCC-------CCHHHHHHHHh-CCCEEEEe
Confidence 566665444445556666655 7655543221111111 2234555544433 35677777665 34555443
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCC
Q 022213 188 NPGNPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
....+. ......+.+++.|++.++
T Consensus 73 a~~~~~---~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 73 SSSEVG---QRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp C-----------CHHHHHHHHHHHHTC
T ss_pred CCCCch---HHHHHHHHHHHHHHHcCC
Confidence 322221 122335677777776654
No 372
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=38.60 E-value=23 Score=31.97 Aligned_cols=30 Identities=17% Similarity=0.329 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
+.++++++++.|+++|+-||.|-++-....
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVANHMGY 125 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccCCC
Confidence 378999999999999999999999986543
No 373
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=38.32 E-value=23 Score=32.04 Aligned_cols=29 Identities=14% Similarity=0.320 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
.++++++++.|+++|+-||.|-++-....
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 68999999999999999999999986554
No 374
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=38.00 E-value=1.5e+02 Score=23.57 Aligned_cols=65 Identities=15% Similarity=0.014 Sum_probs=34.2
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
.+++|.++...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -|.+.++++++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 71 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV-----SDRDQVFAAVE 71 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHH
Confidence 356666555545666777778888887654332222222 222354555554432 34556655543
No 375
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=37.90 E-value=1.4e+02 Score=23.70 Aligned_cols=93 Identities=18% Similarity=0.102 Sum_probs=48.3
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCC-cch---HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc----
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-PYY---EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---- 179 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~-~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 179 (301)
..+++|.|+...=..+.+.|.+.|.+|++..-.- ... ...++..+.+...+..+- -|.+.+++.+++
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV-----ADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 3466776666555677778888898887643222 211 223334566666665432 355566555432
Q ss_pred --CccEEEEcCC-CCCcc--cCCCHHHHHHHH
Q 022213 180 --NTAAMVIINP-GNPCG--NVFTYHHLQEIA 206 (301)
Q Consensus 180 --~~~~v~l~~p-~nptG--~~~~~~~l~~i~ 206 (301)
+...++ .+. ..+.+ ...+.+++++..
T Consensus 80 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~ 110 (246)
T 3osu_A 80 FGSLDVLV-NNAGITRDNLLMRMKEQEWDDVI 110 (246)
T ss_dssp HSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCcccCCHHHHHHHH
Confidence 345444 333 22222 234666665543
No 376
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=37.90 E-value=20 Score=32.36 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
+.++++++++.|+++|+-||.|-++-....
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 378999999999999999999999876544
No 377
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=37.67 E-value=1.6e+02 Score=23.80 Aligned_cols=96 Identities=11% Similarity=0.066 Sum_probs=50.1
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCC------------cc---hHHHHHhcCceEEEeecCCCCCCCCCH
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW------------PY---YEGIAQRKQVEVRHFDLLPERNWEVDL 170 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~------------~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.- .. ....+...+.++..+..+- -|.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~ 83 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV-----KDR 83 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCC-----CCH
Confidence 344566666665555677778888898887654321 01 1122334566666665533 355
Q ss_pred HHHHhhccc------CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 171 DAVEALADK------NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 171 ~~l~~~~~~------~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
+.+++.+++ +...++ ++. ..+.+ ...+.+++++..+
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 84 AALESFVAEAEDTLGGIDIAI-TNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCEEE-ECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 555555432 345444 433 22222 2356667665443
No 378
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=37.66 E-value=52 Score=28.68 Aligned_cols=28 Identities=11% Similarity=0.233 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEccCCcc
Q 022213 197 FTYHHLQEIAEMARKLRVMVVADEVYGH 224 (301)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~ii~D~~y~~ 224 (301)
++.++.++++++|+++|+.+.+..-|..
T Consensus 103 l~~~ea~~l~~~A~~~g~~~~v~~~yr~ 130 (372)
T 4gmf_A 103 LHPDDISSLQTLAQEQGCCYWINTFYPH 130 (372)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSGGG
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcCcccC
Confidence 3678999999999999999999877754
No 379
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=37.59 E-value=1.6e+02 Score=23.63 Aligned_cols=33 Identities=21% Similarity=0.218 Sum_probs=22.2
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
...+++|.++...-..+.+.|.+.|.+|++..-
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 345777766655556777777778888776643
No 380
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=37.54 E-value=1.6e+02 Score=23.72 Aligned_cols=68 Identities=12% Similarity=0.013 Sum_probs=36.6
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
+....+++|.++...-..+.+.|.+.|..|++..-.-...... ++..+.++..+..+- -|.+.+++++
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~ 99 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-----SNREDIYSSA 99 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC-----CCHHHHHHHH
Confidence 3444567776665555677777778888887654332222222 222344555554432 3455555544
No 381
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=37.42 E-value=37 Score=29.86 Aligned_cols=80 Identities=15% Similarity=0.052 Sum_probs=42.0
Q ss_pred HHHhhcccCccEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEccCCcccccCCCCCCCccccCCCCCEEEEecC
Q 022213 172 AVEALADKNTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (301)
Q Consensus 172 ~l~~~~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~ 250 (301)
.++.+.+..-+.||.+ -+.|-+. ..-.+++++|+++|+++|+-+|+|-.=..+..-+.....+ ++
T Consensus 46 Yi~~a~~~Gf~~IFTS-L~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~dl-------------~~ 111 (385)
T 1x7f_A 46 YISAAARHGFSRIFTC-LLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSDL-------------SF 111 (385)
T ss_dssp HHHHHHTTTEEEEEEE-ECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCCT-------------HH
T ss_pred HHHHHHHCCCCEEEcc-CCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHH-------------HH
Confidence 3444444444455443 2233322 2335789999999999999999998755433211111111 23
Q ss_pred cccCCCCcceeEEEE
Q 022213 251 SKRWLVPGWRFGWLV 265 (301)
Q Consensus 251 SK~~~~~G~rvG~~~ 265 (301)
=|.+|+.|+|+=+-.
T Consensus 112 f~~lGi~gLRLD~Gf 126 (385)
T 1x7f_A 112 FAELGADGIRLDVGF 126 (385)
T ss_dssp HHHHTCSEEEESSCC
T ss_pred HHHcCCCEEEEcCCC
Confidence 344577788876654
No 382
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=37.31 E-value=1.7e+02 Score=23.88 Aligned_cols=98 Identities=17% Similarity=0.057 Sum_probs=52.6
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCc----------chHHHHHhcCceEEEeecCCCCCCCCCHHHHH
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP----------YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 174 (301)
+....+++|.+++..=..+.+.|.+.|.+|++..-.-. .....+...+.++..+..+- -|.+.++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~ 81 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDI-----RDGDAVA 81 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCT-----TSHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHH
Confidence 34445677776665556777788888988876543322 11223344566776666533 3455555
Q ss_pred hhccc------CccEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 022213 175 ALADK------NTAAMVIINPGNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 175 ~~~~~------~~~~v~l~~p~nptG--~~~~~~~l~~i~~ 207 (301)
+++++ +...++-+--....+ ...+.++++++.+
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 54432 345444332222222 2356777776554
No 383
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=37.16 E-value=1.6e+02 Score=23.66 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=32.5
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hcCceEEEeecCC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDLLP 162 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~ 162 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-.......+ ..+.++..+..+-
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv 79 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDL 79 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC
Confidence 34456666666555567777788889888876544333222222 1455566555543
No 384
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=37.12 E-value=38 Score=28.71 Aligned_cols=52 Identities=12% Similarity=0.199 Sum_probs=37.3
Q ss_pred CHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCeEEEccCCcccc
Q 022213 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL-RVMVVADEVYGHLT 226 (301)
Q Consensus 169 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~ii~D~~y~~~~ 226 (301)
-.+.++++++...+.+++..+. . +.++.+++.+.|+++ ++.+|-+.+.....
T Consensus 84 ~~~~~~e~i~~Gi~~iv~~t~G----~--~~~~~~~l~~~a~~~~gi~liGPnc~Gii~ 136 (305)
T 2fp4_A 84 AAAAINEAIDAEVPLVVCITEG----I--PQQDMVRVKHRLLRQGKTRLIGPNCPGVIN 136 (305)
T ss_dssp HHHHHHHHHHTTCSEEEECCCC----C--CHHHHHHHHHHHTTCSSCEEECSSSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECCC----C--ChHHHHHHHHHHHhcCCcEEEeCCCCeEec
Confidence 3556666777777876655553 2 345567899999999 99999888877654
No 385
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=37.08 E-value=1.7e+02 Score=23.97 Aligned_cols=34 Identities=21% Similarity=0.116 Sum_probs=22.8
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
....+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 66 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGATIVFNDI 66 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3445677766655556777778788988876543
No 386
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.02 E-value=1.2e+02 Score=24.60 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=21.1
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
..+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 34666666555456677777788988876543
No 387
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=36.92 E-value=68 Score=29.22 Aligned_cols=24 Identities=21% Similarity=0.187 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhCCCeEEEccCCc
Q 022213 200 HHLQEIAEMARKLRVMVVADEVYG 223 (301)
Q Consensus 200 ~~l~~i~~~~~~~~~~ii~D~~y~ 223 (301)
+.++++++.|+++|+.+|+|--+.
T Consensus 86 ~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 86 KRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHHHHHHHCCCEEEEecCCC
Confidence 466777777777777777776444
No 388
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=36.89 E-value=78 Score=27.18 Aligned_cols=79 Identities=14% Similarity=0.164 Sum_probs=47.7
Q ss_pred CCCCcchHHHHHhc-CceEEEeecCCCCCCCCCHHHHHhhcc-cCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 022213 138 RPGWPYYEGIAQRK-QVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (301)
Q Consensus 138 ~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (301)
-|.|.....+.... +..+..+-+.+. .-.+.+.+++. ...+.+++..-.-| .++.+++.++|+++++.
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G~~------e~~~~~l~~~a~~~g~r 133 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGIP------EALTRKLIKKADQKGVT 133 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCCC------HHHHHHHHHHHHHHTCE
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHcCCE
Confidence 35666666655543 344443322221 23456666666 56777666443333 36778899999999999
Q ss_pred EEEccCCcccc
Q 022213 216 VVADEVYGHLT 226 (301)
Q Consensus 216 ii~D~~y~~~~ 226 (301)
+|==++...+.
T Consensus 134 liGPNc~Gii~ 144 (334)
T 3mwd_B 134 IIGPATVGGIK 144 (334)
T ss_dssp EECSSCCCEEE
T ss_pred EEccCCccccC
Confidence 98777776543
No 389
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=36.47 E-value=1.7e+02 Score=23.78 Aligned_cols=96 Identities=17% Similarity=0.132 Sum_probs=49.2
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCc-chHHHHH---h-cCceEEEeecCCCCCCCCCHHHHHhhccc-
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-YYEGIAQ---R-KQVEVRHFDLLPERNWEVDLDAVEALADK- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~-~~~~~~~---~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-. ......+ . .+.++..+..+- -|.+.+++++++
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMV 98 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHH
Confidence 3445777777666556777788888988887654222 2222221 1 244555554432 355566555432
Q ss_pred -----CccEEEEcCC-CCCccc--CCCHHHHHHHHH
Q 022213 180 -----NTAAMVIINP-GNPCGN--VFTYHHLQEIAE 207 (301)
Q Consensus 180 -----~~~~v~l~~p-~nptG~--~~~~~~l~~i~~ 207 (301)
+...++ ++. ..+.+. ..+.++++++.+
T Consensus 99 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 99 ADRFGGADILV-NNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HHHTSSCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHCCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444 433 222222 346666665443
No 390
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=36.43 E-value=30 Score=30.65 Aligned_cols=30 Identities=30% Similarity=0.491 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
+.++++++++.|+++|+-||.|-++.....
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTF 102 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 478999999999999999999999987554
No 391
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=36.42 E-value=1.6e+02 Score=23.35 Aligned_cols=32 Identities=22% Similarity=0.093 Sum_probs=22.0
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPG 140 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~ 140 (301)
.+++|.|+...=..+.+.|.+.|.+|++..-.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46666666555567777788889888876543
No 392
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=36.25 E-value=1.5e+02 Score=26.46 Aligned_cols=95 Identities=16% Similarity=0.139 Sum_probs=55.2
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH-HHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccE
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (301)
+...+|++..|+..|...+ +.|.+.|-.|.+.+|....-. ......+++... .. +..+.+. +..
T Consensus 10 l~~~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~------~~--~~~~~l~-----~~~- 74 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQFTVWANEGMLTLVE------GP--FDETLLD-----SCW- 74 (457)
T ss_dssp CBTCEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEE------SS--CCGGGGT-----TCS-
T ss_pred CCCCEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEE------CC--CCccccC-----Ccc-
Confidence 4456788888888777555 566677888888777655322 222223343332 11 2223332 233
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeE-EEccC
Q 022213 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMV-VADEV 221 (301)
Q Consensus 184 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~i-i~D~~ 221 (301)
+++..|++|. .=..+++.|+++++++ ++|+.
T Consensus 75 lVi~at~~~~-------~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 75 LAIAATDDDT-------VNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp EEEECCSCHH-------HHHHHHHHHHHTTCEEEETTCT
T ss_pred EEEEcCCCHH-------HHHHHHHHHHHcCCEEEECCCc
Confidence 4455666552 2467888899999986 56665
No 393
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=35.85 E-value=1.6e+02 Score=23.08 Aligned_cols=74 Identities=23% Similarity=0.138 Sum_probs=41.5
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-cCceEEEeecCCCCCCCCCHHHHHhhccc--Cc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADK--NT 181 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~ 181 (301)
+....+++|.++...=..+.+.|.+.|.+|++..-.-.......+. .+.+....++ -|.+.+++.++. +.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL-------GDWDATEKALGGIGPV 77 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTTCCCC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecC-------CCHHHHHHHHHHcCCC
Confidence 3444677777665555677777778888887664432222222222 2455443333 366777777653 24
Q ss_pred cEEE
Q 022213 182 AAMV 185 (301)
Q Consensus 182 ~~v~ 185 (301)
..++
T Consensus 78 d~vi 81 (244)
T 1cyd_A 78 DLLV 81 (244)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 5444
No 394
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=35.67 E-value=1.9e+02 Score=23.99 Aligned_cols=52 Identities=10% Similarity=0.103 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhhCCCCCCCCCEEEcCCH---HHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 88 PARRAIADYLSRDLPYKLSADDVYVTLGC---KQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~---~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
+=|+++.+...+..+ ..-.|+++.|+ .++++.+-++-.-.-|.|++..|.|.
T Consensus 54 ~Er~~v~~~~~~~~~---gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (291)
T 3a5f_A 54 TERKETIKFVIDKVN---KRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYN 108 (291)
T ss_dssp HHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHhC---CCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 445555555443211 12247776554 66666665554333399999999886
No 395
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=35.63 E-value=29 Score=30.81 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++....
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 37889999999999999999999987654
No 396
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=35.53 E-value=48 Score=27.74 Aligned_cols=52 Identities=17% Similarity=0.235 Sum_probs=36.6
Q ss_pred CHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 169 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
..+.++++++.+.+.+++... | ++.++.+++.+.++++++.++-.++...+.
T Consensus 77 ~~~~~~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~gi~vigPNc~Gii~ 128 (288)
T 1oi7_A 77 AADAALEAAHAGIPLIVLITE----G--IPTLDMVRAVEEIKALGSRLIGGNCPGIIS 128 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHHTCEEEESSSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEeCCCCeEEc
Confidence 456666677777786555432 3 245668899999999999999888776544
No 397
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=35.43 E-value=1.3e+02 Score=25.02 Aligned_cols=25 Identities=24% Similarity=0.072 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhCCCe---EEEccCCc
Q 022213 199 YHHLQEIAEMARKLRVM---VVADEVYG 223 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~---ii~D~~y~ 223 (301)
.+.+++.++.|.++|+- ||.|--..
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDPg~G 181 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDPGLG 181 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred HHHHHHHHHHHHHcCCChhhEEEECCCC
Confidence 56788899999999997 99998543
No 398
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=35.36 E-value=1.7e+02 Score=23.32 Aligned_cols=65 Identities=15% Similarity=0.039 Sum_probs=33.6
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~--~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
.+++|.++...=..+.+.|.+.|.+|++..-.-.. .... ++..+.++..+..+- -|.+.++++++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 73 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV-----TDKANFDSAID 73 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHH
Confidence 35666655554466667777778887765432222 2222 222354555555432 34555555443
No 399
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=35.26 E-value=28 Score=31.07 Aligned_cols=29 Identities=28% Similarity=0.472 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 57899999999999999999999986543
No 400
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=35.23 E-value=1.9e+02 Score=23.86 Aligned_cols=72 Identities=13% Similarity=0.152 Sum_probs=40.4
Q ss_pred CcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 022213 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (301)
Q Consensus 141 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~ 220 (301)
|..+..++. .+.++.+-..+ ....+....+++.. +-|++.-|- ..+.++.+++.+.|+++|+.+.+..
T Consensus 57 ~~~~~~ll~--~~D~V~i~tp~----~~h~~~~~~al~~g-k~vl~EKP~-----~~~~~~~~~l~~~a~~~g~~~~v~~ 124 (308)
T 3uuw_A 57 FDSIESLAK--KCDCIFLHSST----ETHYEIIKILLNLG-VHVYVDKPL-----ASTVSQGEELIELSTKKNLNLMVGF 124 (308)
T ss_dssp CSCHHHHHT--TCSEEEECCCG----GGHHHHHHHHHHTT-CEEEECSSS-----SSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred cCCHHHHHh--cCCEEEEeCCc----HhHHHHHHHHHHCC-CcEEEcCCC-----CCCHHHHHHHHHHHHHcCCEEEEee
Confidence 444444444 44555443311 13344444444433 334443342 3567889999999999998888776
Q ss_pred CCcc
Q 022213 221 VYGH 224 (301)
Q Consensus 221 ~y~~ 224 (301)
.+.+
T Consensus 125 ~~r~ 128 (308)
T 3uuw_A 125 NRRF 128 (308)
T ss_dssp GGGG
T ss_pred cccc
Confidence 6654
No 401
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=35.23 E-value=1.6e+02 Score=23.87 Aligned_cols=69 Identities=16% Similarity=0.069 Sum_probs=37.7
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCc---eEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQV---EVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-.-...... ++..+. ++..+..+- -|.+.++++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 83 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI-----TNEDETARAVD 83 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCT-----TSHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCC-----CCHHHHHHHHH
Confidence 3444567776665555677777888898888765433322222 222333 555554432 35555555543
No 402
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=35.05 E-value=1.8e+02 Score=23.65 Aligned_cols=97 Identities=10% Similarity=0.060 Sum_probs=50.3
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEc-CCCC---cchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhcccC
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLP-RPGW---PYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~-~p~~---~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 180 (301)
..|++|.++...-..+++.|.+.|..|.+. ...- ..-... +...+++++..++ -|.+.+.++++ .
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~d~~~l~~~~~-~ 76 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL-------DDHQRLVDALK-Q 76 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCS-------SCHHHHHHHHT-T
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCC-------CCHHHHHHHHh-C
Confidence 467777654333345556666667665543 2221 111111 1234566554443 46778888776 4
Q ss_pred ccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-C
Q 022213 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR-V 214 (301)
Q Consensus 181 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~-~ 214 (301)
...|+.+......+. +...-+.+++.|++.+ +
T Consensus 77 ~d~vi~~a~~~~~~~--~~~~~~~l~~aa~~~g~v 109 (313)
T 1qyd_A 77 VDVVISALAGGVLSH--HILEQLKLVEAIKEAGNI 109 (313)
T ss_dssp CSEEEECCCCSSSST--TTTTHHHHHHHHHHSCCC
T ss_pred CCEEEECCccccchh--hHHHHHHHHHHHHhcCCC
Confidence 666655433221111 1223577888888887 5
No 403
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=35.04 E-value=96 Score=24.90 Aligned_cols=125 Identities=6% Similarity=0.050 Sum_probs=58.6
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCC--CEEEEcCCCCcchHHHHHh-----cCceE
Q 022213 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG--ANVLLPRPGWPYYEGIAQR-----KQVEV 155 (301)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g--d~Vl~~~p~~~~~~~~~~~-----~g~~~ 155 (301)
..++.+..+.+..++......++++++|+++.-++.+......++..+. ..|+......+........ .+. +
T Consensus 107 ~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~~~~~~~~~~~~-P 185 (246)
T 4f21_A 107 VEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNFKGKITSINKGL-P 185 (246)
T ss_dssp CC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHHSTTCCGGGTTC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccccccccccccCC-c
Confidence 3567777777777765533335788999987655555544443443332 3444443333222211111 112 2
Q ss_pred EEeecCCCCCCCCCHHHHH---hhccc-CccEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 022213 156 RHFDLLPERNWEVDLDAVE---ALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (301)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~---~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~ 211 (301)
+.+-.- ..+..+..+.-+ +.+++ ....-+...|+ .|-.++.++++.+.++.+|
T Consensus 186 vl~~HG-~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g--~gH~i~~~~l~~~~~fL~k 242 (246)
T 4f21_A 186 ILVCHG-TDDQVLPEVLGHDLSDKLKVSGFANEYKHYVG--MQHSVCMEEIKDISNFIAK 242 (246)
T ss_dssp EEEEEE-TTCSSSCHHHHHHHHHHHHTTTCCEEEEEESS--CCSSCCHHHHHHHHHHHHH
T ss_pred hhhccc-CCCCccCHHHHHHHHHHHHHCCCCeEEEEECC--CCCccCHHHHHHHHHHHHH
Confidence 222211 222234444332 23332 22332333232 3445678888888888765
No 404
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=34.98 E-value=1.7e+02 Score=23.17 Aligned_cols=68 Identities=15% Similarity=0.097 Sum_probs=36.8
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-..... .++..+.++..+..+- -|.+.++++++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~ 82 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDV-----TNTESVQNAVR 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHH
Confidence 34457777666555566777777788888766433222211 2223354555554432 35566665543
No 405
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=34.92 E-value=1.8e+02 Score=23.37 Aligned_cols=34 Identities=24% Similarity=0.124 Sum_probs=22.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
....+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3345666666655556777777788988776543
No 406
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=34.44 E-value=31 Score=31.90 Aligned_cols=116 Identities=17% Similarity=0.328 Sum_probs=64.2
Q ss_pred CCCCCCCCCEEEcCCHHHHHHHHHHHhcC--C-----------CC------EEEEcCCCCcc------------------
Q 022213 101 LPYKLSADDVYVTLGCKQAVEVILSVLAR--P-----------GA------NVLLPRPGWPY------------------ 143 (301)
Q Consensus 101 ~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~-----------gd------~Vl~~~p~~~~------------------ 143 (301)
|...+ ++.|.++.++..+++..+++|.+ + |. ..+...|.|.-
T Consensus 80 Y~L~v-~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ik 158 (543)
T 3rcn_A 80 YRLEV-SDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDNVL 158 (543)
T ss_dssp EEEEE-SSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHHHH
T ss_pred eEEEE-CCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHHHH
Confidence 33456 67899988887777777776642 1 21 12344666641
Q ss_pred -hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc-----ccCccEEEE-c--CCCCCcccCCCHHHHHHHHHHHHhCCC
Q 022213 144 -YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA-----DKNTAAMVI-I--NPGNPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 144 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~v~l-~--~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
+......+++....+.+..+.+|.+..+.+.++- +..+..--. . .-..|.|..++.+++++|++.|+++++
T Consensus 159 ~~ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI 238 (543)
T 3rcn_A 159 RFIEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHI 238 (543)
T ss_dssp HHHHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCC
Confidence 1233345566666665544444444333222211 101100000 0 012355788999999999999999999
Q ss_pred eEE
Q 022213 215 MVV 217 (301)
Q Consensus 215 ~ii 217 (301)
-||
T Consensus 239 ~VI 241 (543)
T 3rcn_A 239 TVI 241 (543)
T ss_dssp EEE
T ss_pred EEe
Confidence 877
No 407
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=34.42 E-value=1.9e+02 Score=23.52 Aligned_cols=57 Identities=18% Similarity=0.003 Sum_probs=33.8
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhcCceEEEeecC
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLL 161 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~ 161 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-.-..... .+...+.++..+..+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 90 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEec
Confidence 344567777776665577777888889888866443332222 223345566665554
No 408
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=34.29 E-value=55 Score=26.90 Aligned_cols=67 Identities=10% Similarity=-0.004 Sum_probs=41.1
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+- -+.+.+++.+
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 70 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDV-----RSLQDQKRAA 70 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 344567777766655777778888898888776554444455555565666555432 3455555544
No 409
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=34.17 E-value=49 Score=30.77 Aligned_cols=29 Identities=17% Similarity=0.392 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++....
T Consensus 217 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 217 DKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 47899999999999999999999987654
No 410
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=34.13 E-value=1.5e+02 Score=24.71 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=22.3
Q ss_pred CEEEcCC---HHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 022213 109 DVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWPY 143 (301)
Q Consensus 109 ~i~~t~g---~~~al~~~~~~l~~~gd~Vl~~~p~~~~ 143 (301)
.|+++.| ..++++.+-++-.-.-|.|++..|.|..
T Consensus 73 pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 110 (292)
T 3daq_A 73 PVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNK 110 (292)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred cEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 4666544 5666666655543233899999998863
No 411
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=34.01 E-value=1.7e+02 Score=22.91 Aligned_cols=73 Identities=21% Similarity=0.162 Sum_probs=40.4
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-cCceEEEeecCCCCCCCCCHHHHHhhccc--Ccc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADK--NTA 182 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~ 182 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-.......+. .+.+....++ -|.+.+++.++. +..
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~id 78 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL-------GDWEATERALGSVGPVD 78 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTTCCCCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeC-------CCHHHHHHHHHHcCCCC
Confidence 444577776665555667777777888877654332222222222 2445443333 366777777653 244
Q ss_pred EEE
Q 022213 183 AMV 185 (301)
Q Consensus 183 ~v~ 185 (301)
.++
T Consensus 79 ~vi 81 (244)
T 3d3w_A 79 LLV 81 (244)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 412
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=33.66 E-value=1.8e+02 Score=23.01 Aligned_cols=66 Identities=15% Similarity=0.068 Sum_probs=35.2
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC-CCcchHH---HHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRP-GWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p-~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
..+++|.++...=..+.+.|.+.|.+|++..- .-..... .++..+.++..+..+- -|.+.+++.++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 74 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADV-----ANAEDVTNMVK 74 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHH
Confidence 34666666655556677777788988776533 2222222 2223354555554432 35566665543
No 413
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=33.43 E-value=39 Score=31.47 Aligned_cols=29 Identities=17% Similarity=0.321 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++....
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 36899999999999999999999987654
No 414
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=33.25 E-value=93 Score=24.94 Aligned_cols=63 Identities=19% Similarity=0.021 Sum_probs=35.6
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
...+++|.+++..=..+.+.|.+.|.+|++..-. .....+..+.++..+..+- -|.+.+++++
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 71 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADV-----TDEAAVASAL 71 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHHHHHHTCTTEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHHHHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 3456666665555566777777888887765432 2344455565566555433 3455555544
No 415
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=33.22 E-value=1.7e+02 Score=24.41 Aligned_cols=53 Identities=11% Similarity=0.146 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCH---HHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGC---KQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~---~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
.+=|+++.+...+..+ ..-.|+++.|+ .++++.+-.+-.-.-|.|++..|.|.
T Consensus 63 ~eEr~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 118 (303)
T 2wkj_A 63 LSEREQVLEIVAEEAK---GKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYY 118 (303)
T ss_dssp HHHHHHHHHHHHHHHT---TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCC
Confidence 3445555555443211 12246665554 66666665554323489999999886
No 416
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=33.09 E-value=2e+02 Score=23.44 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=35.1
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----cCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
..+++|.++...=..+.+.|.+.|.+|++..-.-.......+. .+.++..+..+- -|.+.+++++
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~ 95 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTV 95 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHH
Confidence 4567776665555677777778888887764432222222221 144555554432 3555555544
No 417
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=32.95 E-value=1.6e+02 Score=23.28 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=21.4
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~ 138 (301)
...+++|.++...=..+.+.|.+.|.+|++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATD 37 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 34566666655555667777778898887664
No 418
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=32.87 E-value=30 Score=31.25 Aligned_cols=28 Identities=25% Similarity=0.441 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
.++++++++.|+++|+-||.|-++-...
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 5889999999999999999999987643
No 419
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=32.79 E-value=1.2e+02 Score=22.62 Aligned_cols=60 Identities=22% Similarity=0.206 Sum_probs=39.0
Q ss_pred CCCCHHHHHhhccc-CccEEEEcCCCCCcccCCCH-HHHHHHH-HHHHhCCC-eEEEccCCccc
Q 022213 166 WEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTY-HHLQEIA-EMARKLRV-MVVADEVYGHL 225 (301)
Q Consensus 166 ~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~-~~l~~i~-~~~~~~~~-~ii~D~~y~~~ 225 (301)
...+.+.|.+.+++ ++..+++-.|-|..|..-.. +..+.++ .++++.++ ++++||.|...
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~ 103 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTM 103 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHH
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHH
Confidence 44678999998877 56778888897666655322 2335555 33444566 45779998763
No 420
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=32.77 E-value=28 Score=23.84 Aligned_cols=24 Identities=13% Similarity=0.127 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCCCeEEEccCCccc
Q 022213 202 LQEIAEMARKLRVMVVADEVYGHL 225 (301)
Q Consensus 202 l~~i~~~~~~~~~~ii~D~~y~~~ 225 (301)
-++|.++++++|+.++.|..-...
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LAr~ 52 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKLARK 52 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHHHHH
T ss_pred HHHHHHHHHHcCCCEEECHHHHHH
Confidence 578888899999999999876543
No 421
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=32.77 E-value=2e+02 Score=23.32 Aligned_cols=56 Identities=18% Similarity=-0.010 Sum_probs=32.8
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecC
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLL 161 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~ 161 (301)
+....+++|.|+...=..+.+.|.+.|.+|++..-. ...... +...+.++..+..+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~D 87 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVAD 87 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEec
Confidence 444556777766655567777888889888776522 222222 23345566666553
No 422
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=32.76 E-value=1.9e+02 Score=23.28 Aligned_cols=32 Identities=16% Similarity=0.017 Sum_probs=21.1
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
..+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 45666666555446667777778888876543
No 423
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=32.70 E-value=2e+02 Score=23.41 Aligned_cols=68 Identities=12% Similarity=-0.067 Sum_probs=38.7
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH---hcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ---RKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-.......+ ..+.++..+..+- -|.+.++++++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 97 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVR 97 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHH
Confidence 34456677666655567777788889888876544333333322 2345555555433 35555555543
No 424
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=32.68 E-value=32 Score=30.00 Aligned_cols=24 Identities=17% Similarity=0.415 Sum_probs=21.8
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEE
Q 022213 194 GNVFTYHHLQEIAEMARKLRVMVV 217 (301)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~ii 217 (301)
+..++.+++++|++.|+++++-||
T Consensus 89 ~g~YT~~di~eiv~YA~~rgI~VI 112 (367)
T 1yht_A 89 KPFLSYRQLDDIKAYAKAKGIELI 112 (367)
T ss_dssp CEEBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEE
Confidence 457999999999999999999887
No 425
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=32.66 E-value=1.9e+02 Score=23.17 Aligned_cols=97 Identities=11% Similarity=-0.041 Sum_probs=48.6
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH---hc--CceEEEeecCCCCCCCCCHHHHHhhccc
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ---RK--QVEVRHFDLLPERNWEVDLDAVEALADK 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~---~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (301)
+....+++|.++...=..+.+.|.+.|.+|++..-.-.......+ .. +..+..+..+. -+.+.+++.+++
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 82 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL-----GTEQGCQDVIEK 82 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-----TSHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-----CCHHHHHHHHHh
Confidence 344556777766555566777788889888876544332222222 11 34444444322 245566665543
Q ss_pred --CccEEEEcCCCCCc--ccCCCHHHHHHHH
Q 022213 180 --NTAAMVIINPGNPC--GNVFTYHHLQEIA 206 (301)
Q Consensus 180 --~~~~v~l~~p~npt--G~~~~~~~l~~i~ 206 (301)
+...++-+--.... -...+.+++++..
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 113 (267)
T 3t4x_A 83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLF 113 (267)
T ss_dssp CCCCSEEEECCCCCCCCCGGGSCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHH
Confidence 34444433221111 1234566655443
No 426
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=32.56 E-value=1.9e+02 Score=23.11 Aligned_cols=68 Identities=16% Similarity=0.083 Sum_probs=36.2
Q ss_pred CCCCCEEEcCCH--HHHHHHHHHHhcCCCCEEEEcCCCCcch-----HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 105 LSADDVYVTLGC--KQAVEVILSVLARPGANVLLPRPGWPYY-----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 105 ~~~~~i~~t~g~--~~al~~~~~~l~~~gd~Vl~~~p~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
+....+++|.++ ...=..+.+.|.+.|.+|++..-.-... ..+.+..+.++..+..+- -|.+.+++++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~ 92 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV-----DSYESCEKLV 92 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT-----TCHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC-----CCHHHHHHHH
Confidence 344567777665 3444556667777888887764333221 222233466666555432 3555555544
No 427
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=32.49 E-value=1.3e+02 Score=25.21 Aligned_cols=116 Identities=10% Similarity=0.011 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHH------hcCce
Q 022213 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQ------RKQVE 154 (301)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~------~~g~~ 154 (301)
|..+..+.+.+-+.. ....|++|.++.-.-..++..|.+.|..|.+..-.-.. ...... ..++.
T Consensus 11 ~~~~~~~~~~~~~~~------~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (352)
T 1sb8_A 11 GMMSRYEELRKELPA------QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 84 (352)
T ss_dssp -CCCHHHHHHHHHHH------SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEE
T ss_pred HHHHHHHhhchhcCc------cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceE
Confidence 555666666666532 34467777765444456666676778777754322111 111111 13444
Q ss_pred EEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCccc-CCCH--------HHHHHHHHHHHhCCC
Q 022213 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN-VFTY--------HHLQEIAEMARKLRV 214 (301)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~-~~~~--------~~l~~i~~~~~~~~~ 214 (301)
.+..++ .|.+.++++++ +...|+-+......+. .-+. .....+++.|++.++
T Consensus 85 ~~~~Dl-------~d~~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 145 (352)
T 1sb8_A 85 FIQGDI-------RNLDDCNNACA-GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 145 (352)
T ss_dssp EEECCT-------TSHHHHHHHHT-TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EEECCC-------CCHHHHHHHhc-CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 443333 35677777775 4566554432211110 0111 123567888887764
No 428
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=32.39 E-value=1.7e+02 Score=23.20 Aligned_cols=65 Identities=18% Similarity=0.075 Sum_probs=34.9
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC-CCCcc---hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPR-PGWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~-p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
..+++|.|+...=..+.+.|.+.|.+|++.. ..-.. ....+...+.++..+..+- -|.+.+++.+
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 82 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAF 82 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHH
Confidence 3566666655555667777778898777643 22222 2233334455555554432 3555555544
No 429
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=32.25 E-value=32 Score=34.50 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
.++++++++.|+++|+-||.|-+|....
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 6899999999999999999999996543
No 430
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=32.19 E-value=1.1e+02 Score=23.37 Aligned_cols=92 Identities=11% Similarity=-0.006 Sum_probs=48.3
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCC
Q 022213 110 VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189 (301)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 189 (301)
|++|.++...=..+++.|.+.|..|.+..-.-..... +. .+++++..++... + . +.+ ....+++.+..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~-~~~~~~~~D~~d~-----~--~--~~~-~~~d~vi~~ag 70 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ-TH-KDINILQKDIFDL-----T--L--SDL-SDQNVVVDAYG 70 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH-HC-SSSEEEECCGGGC-----C--H--HHH-TTCSEEEECCC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh-cc-CCCeEEeccccCh-----h--h--hhh-cCCCEEEECCc
Confidence 6666654444456666677778777765433222111 11 4566665554221 1 1 222 24566655443
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCC
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLR 213 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~ 213 (301)
..+........-.+.+++.|++.+
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~ 94 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTV 94 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCC
T ss_pred CCccccchHHHHHHHHHHHHHhcC
Confidence 333333345556788999998874
No 431
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=32.18 E-value=1.7e+02 Score=24.36 Aligned_cols=36 Identities=17% Similarity=0.153 Sum_probs=23.3
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
...+++|.++...-..+.+.|.+.|.+|++..-.-.
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~ 43 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQD 43 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 345666666555556677777788988887654433
No 432
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=31.90 E-value=2.1e+02 Score=23.38 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=51.5
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-.. .....+..+.++..+..+- -|.+.+++++++
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDL-----SDEQHCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34456777666655567777888889888765433321 1223344566666665533 345555554432
Q ss_pred ----CccEEEEcCCC--CCcc--cCCCHHHHHHHHH
Q 022213 180 ----NTAAMVIINPG--NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ----~~~~v~l~~p~--nptG--~~~~~~~l~~i~~ 207 (301)
+...++ .+.. .+.+ ...+.++++++.+
T Consensus 121 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3ijr_A 121 RQLGSLNILV-NNVAQQYPQQGLEYITAEQLEKTFR 155 (291)
T ss_dssp HHHSSCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHH
Confidence 344443 4331 1222 2246677776555
No 433
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=31.73 E-value=2.1e+02 Score=23.23 Aligned_cols=65 Identities=11% Similarity=0.014 Sum_probs=35.1
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
..+++|.++...-..+.+.|.+.|.+|++..-.-...... ++..+.++..+..+- -|.+.+++++
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~d~~~v~~~~ 112 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-----SKKEEISEVI 112 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC-----CCHHHHHHHH
Confidence 4566666655555677778888898887743221222222 222355555555432 3556666554
No 434
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=31.70 E-value=1.3e+02 Score=26.09 Aligned_cols=18 Identities=11% Similarity=0.215 Sum_probs=12.5
Q ss_pred HHHHHHHHHHhCCCeEEE
Q 022213 201 HLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 201 ~l~~i~~~~~~~~~~ii~ 218 (301)
.++++..+++++++.+|+
T Consensus 189 ~lr~L~~~a~~~~~~VI~ 206 (366)
T 1xp8_A 189 ALRKLTAILSKTGTAAIF 206 (366)
T ss_dssp HHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHcCCEEEE
Confidence 456666778899976654
No 435
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=31.68 E-value=46 Score=30.97 Aligned_cols=29 Identities=14% Similarity=0.376 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++....
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 47899999999999999999999887644
No 436
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=31.63 E-value=2e+02 Score=23.00 Aligned_cols=96 Identities=11% Similarity=0.041 Sum_probs=50.1
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEc-CCCCcchH---HHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc--
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLP-RPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~-~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (301)
....+++|.+++..=..+.+.|.+.|.+|++. ...-.... ..++..+.++..+..+- -|.+.+++++++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADL-----TNAAEVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34456677666555567777888889888765 33333222 22233455555555432 355566555432
Q ss_pred ----CccEEEEcCCC-C-Ccc--cCCCHHHHHHHHH
Q 022213 180 ----NTAAMVIINPG-N-PCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 ----~~~~v~l~~p~-n-ptG--~~~~~~~l~~i~~ 207 (301)
+... ++++.. . +.+ ...+.+++++..+
T Consensus 82 ~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 82 DKFGEIHG-LVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HHHCSEEE-EEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCE-EEECCCccCCCCChhhCCHHHHHHHHH
Confidence 2333 444432 1 222 2456677766554
No 437
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=31.47 E-value=34 Score=32.31 Aligned_cols=30 Identities=13% Similarity=0.269 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEccCCccc
Q 022213 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHL 225 (301)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~ii~D~~y~~~ 225 (301)
.=+.++++++++.|+++|+-||.|-++...
T Consensus 282 ~Gt~~df~~LV~~aH~~GI~VIlD~V~NHt 311 (645)
T 4aef_A 282 LGGDRAFVDLLSELKRFDIKVILDGVFHHT 311 (645)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred cCCHHHHHHHHHHhhhcCCEEEEEeccccc
Confidence 346789999999999999999999998764
No 438
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=31.32 E-value=2.1e+02 Score=23.30 Aligned_cols=153 Identities=15% Similarity=0.159 Sum_probs=85.4
Q ss_pred CCCCeeeccCC--CCCCCCCCCChHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCCEEEcCCHH
Q 022213 40 DPRPVVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (301)
Q Consensus 40 ~~~~~i~l~~g--~p~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (301)
.+-++|.|++. ||... =+.++++..+++.++. ....+-+.+.++- . . --+++.+=.-
T Consensus 40 ~GaD~iElGiPfSDP~aD-----GpvIq~a~~rAL~~g~--------~~~~~~~~~~~~r----~-~---~Pivlm~Y~N 98 (252)
T 3tha_A 40 SPIDILELGVAYSDPIAD-----GEIIADAAKIALDQGV--------DIHSVFELLARIK----T-K---KALVFMVYYN 98 (252)
T ss_dssp SSCSEEEEECCCSCCCSC-----CCHHHHHHHHHHHTTC--------CHHHHHHHHHHCC----C-S---SEEEEECCHH
T ss_pred cCCCEEEECCCCCCCCCC-----cHHHHHHHHHHHHCCC--------CHHHHHHHHHHHh----c-C---CCEEEEeccC
Confidence 47899999887 54322 2467777888887432 1234444443331 1 1 1244433222
Q ss_pred ----HHHHHHHHHhcCCC-CEEEEcCCCCc---chHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCC
Q 022213 118 ----QAVEVILSVLARPG-ANVLLPRPGWP---YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189 (301)
Q Consensus 118 ----~al~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 189 (301)
-+++..+..+.+.| |.+++++--+. .+...++.+|++.+++-. +. -+.+.++...+....-+++.+-
T Consensus 99 ~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lva-P~----t~~eRi~~ia~~a~gFiY~Vs~ 173 (252)
T 3tha_A 99 LIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVS-VT----TPKERVKKLVKHAKGFIYLLAS 173 (252)
T ss_dssp HHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEE-TT----SCHHHHHHHHTTCCSCEEEECC
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-CC----CcHHHHHHHHHhCCCeEEEEec
Confidence 23455555555566 89998876554 456777889998766532 11 2356677665543333444443
Q ss_pred CCCcccCCCH-HHHHHHHHHHHhC-CCeEEE
Q 022213 190 GNPCGNVFTY-HHLQEIAEMARKL-RVMVVA 218 (301)
Q Consensus 190 ~nptG~~~~~-~~l~~i~~~~~~~-~~~ii~ 218 (301)
.--||..... +++.++++.++++ ++.+++
T Consensus 174 ~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 174 IGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp SCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 3457765432 3567777777765 455553
No 439
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=31.20 E-value=35 Score=31.53 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 78 t~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 37899999999999999999999987644
No 440
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=31.02 E-value=35 Score=31.63 Aligned_cols=29 Identities=17% Similarity=0.289 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 47899999999999999999999987643
No 441
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=30.89 E-value=35 Score=31.88 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 225 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVLSHIG 225 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECCcccC
Confidence 46889999999999999999999987644
No 442
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=30.81 E-value=1.8e+02 Score=24.11 Aligned_cols=52 Identities=12% Similarity=0.172 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhhCCCCCCCCCEEEcCCH---HHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 88 PARRAIADYLSRDLPYKLSADDVYVTLGC---KQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~---~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
+=|+++.+...+..+ ..-.|+++.|+ .++++.+-++-.-.-|.|++..|.|.
T Consensus 53 ~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 107 (292)
T 2vc6_A 53 SEHEQVVEITIKTAN---GRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYN 107 (292)
T ss_dssp HHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHhC---CCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 445555555443211 12246665554 66676666554333499999999885
No 443
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=30.75 E-value=2.4e+02 Score=23.74 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCC---HHHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
.+=|.++.+...+..+ ..-.|+++.| ..++++.+-++-.-.-|.|++..|.|.
T Consensus 63 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 63 REERAQLIATARKAVG---PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHHHHHHHHHHHHC---TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 3444555555443211 1224666544 466666665554333499999999664
No 444
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=30.75 E-value=1.6e+02 Score=23.67 Aligned_cols=32 Identities=9% Similarity=-0.001 Sum_probs=22.1
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~ 138 (301)
...+++|.++...=..+.+.|.+.|.+|++..
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 59 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATS 59 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34566776665555677778888898887654
No 445
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=30.65 E-value=1.2e+02 Score=23.42 Aligned_cols=92 Identities=8% Similarity=0.003 Sum_probs=49.0
Q ss_pred CEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCCCc-chHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEE
Q 022213 109 DVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWP-YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l 186 (301)
.|++|.++...=..+.+.|. +.|.+|.+..-.-. ....+. ..+.++..+..+- .|.+.++++++ +..+++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~-----~d~~~~~~~~~-~~d~vv~ 79 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSF-----QNPGXLEQAVT-NAEVVFV 79 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCT-----TCHHHHHHHHT-TCSEEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCC-----CCHHHHHHHHc-CCCEEEE
Confidence 37777655444456666777 68888776533211 111111 1233333333321 46788888775 4566554
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 022213 187 INPGNPCGNVFTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (301)
+.... +.+ .+.+++.+++.+.
T Consensus 80 ~ag~~------n~~-~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 80 GAMES------GSD-MASIVKALSRXNI 100 (221)
T ss_dssp SCCCC------HHH-HHHHHHHHHHTTC
T ss_pred cCCCC------Chh-HHHHHHHHHhcCC
Confidence 43221 222 7788888887764
No 446
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=30.61 E-value=1.4e+02 Score=25.32 Aligned_cols=41 Identities=20% Similarity=0.294 Sum_probs=22.1
Q ss_pred CEEEEcCCCCcchH--HHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 132 ANVLLPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 132 d~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
|-|++..|....+. ..+...|..+. + ++....+.++.++++
T Consensus 69 D~V~i~tp~~~H~~~~~~al~aGkhV~-~----EKPla~~~~e~~~l~ 111 (352)
T 3kux_A 69 DLIVIPTPNDTHFPLAQSALAAGKHVV-V----DKPFTVTLSQANALK 111 (352)
T ss_dssp CEEEECSCTTTHHHHHHHHHHTTCEEE-E----CSSCCSCHHHHHHHH
T ss_pred CEEEEeCChHHHHHHHHHHHHCCCcEE-E----ECCCcCCHHHHHHHH
Confidence 88888877765443 33344564432 2 233446666655543
No 447
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=30.55 E-value=36 Score=31.42 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLVVNHTS 105 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 47899999999999999999999987543
No 448
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=30.42 E-value=36 Score=31.83 Aligned_cols=29 Identities=21% Similarity=0.194 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 207 t~~dfk~Lv~~aH~~GI~VilD~V~NH~~ 235 (599)
T 3bc9_A 207 TKGELENAIDALHNNDIKVYFDAVLNHRM 235 (599)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCCC
Confidence 46899999999999999999999987653
No 449
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=30.41 E-value=2.2e+02 Score=23.05 Aligned_cols=97 Identities=18% Similarity=0.125 Sum_probs=51.4
Q ss_pred CCCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEc-CCCCcch---HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-
Q 022213 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLP-RPGWPYY---EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK- 179 (301)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~-~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (301)
+....+++|.++...=..+.+.|.+.|.+|++. ...-... ...++..+.++..+..+- -|.+.+++.+++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN-----RDAEAIEQAIRET 103 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 444556777766655567777888889888765 2221211 223334466666665533 355666555432
Q ss_pred -----CccEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 022213 180 -----NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 -----~~~~v~l~~p~-nptG--~~~~~~~l~~i~~ 207 (301)
+...+ +.+.. ...+ ...+.+++++..+
T Consensus 104 ~~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 104 VEALGGLDIL-VNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HHHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCcEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 34444 44432 1111 2346677766554
No 450
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=30.41 E-value=2.1e+02 Score=22.81 Aligned_cols=67 Identities=18% Similarity=-0.002 Sum_probs=36.9
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -|.+.+++++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-----SSRSERQELM 77 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 344577777766555677777878898887654332222222 222355555555432 3555555544
No 451
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=30.33 E-value=53 Score=22.56 Aligned_cols=57 Identities=18% Similarity=0.146 Sum_probs=36.2
Q ss_pred CCCHHHHHhhccc-CccEEEEcCCCCCcccCCCH-HHHHHHHHHHHhCCC-eEEEccCCc
Q 022213 167 EVDLDAVEALADK-NTAAMVIINPGNPCGNVFTY-HHLQEIAEMARKLRV-MVVADEVYG 223 (301)
Q Consensus 167 ~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~-~~l~~i~~~~~~~~~-~ii~D~~y~ 223 (301)
..+.+.+++.+++ ++..+++-.|-|..|..-+. +..++.++..++.++ +..+||-+.
T Consensus 37 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 37 EEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3567788887766 67888899997776665432 234444444333365 457788765
No 452
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=30.26 E-value=52 Score=26.80 Aligned_cols=53 Identities=11% Similarity=0.143 Sum_probs=32.1
Q ss_pred HHHHHhhcccCccEEEEcCCCCC---cccCCCHHH----HHHHHHHHHhCCCeEEEccCC
Q 022213 170 LDAVEALADKNTAAMVIINPGNP---CGNVFTYHH----LQEIAEMARKLRVMVVADEVY 222 (301)
Q Consensus 170 ~~~l~~~~~~~~~~v~l~~p~np---tG~~~~~~~----l~~i~~~~~~~~~~ii~D~~y 222 (301)
.+.++++++.....+-+=.++.+ -+..++.++ .+++.++|+++++.+|+++-+
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESCH
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCHH
Confidence 45566666666666666665532 001123322 367888899999988886543
No 453
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=30.16 E-value=1.5e+02 Score=21.13 Aligned_cols=75 Identities=4% Similarity=-0.038 Sum_probs=42.4
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 187 (301)
++|++...+.-+...+ +.|.+.|-.|++.+..-... ..++..|..+..-+. .+.+.++++--++.+.++++
T Consensus 8 ~~viIiG~G~~G~~la-~~L~~~g~~v~vid~~~~~~-~~~~~~g~~~i~gd~-------~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLG-EKLLASDIPLVVIETSRTRV-DELRERGVRAVLGNA-------ANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp SCEEEECCSHHHHHHH-HHHHHTTCCEEEEESCHHHH-HHHHHTTCEEEESCT-------TSHHHHHHTTGGGCSEEEEC
T ss_pred CCEEEECcCHHHHHHH-HHHHHCCCCEEEEECCHHHH-HHHHHcCCCEEECCC-------CCHHHHHhcCcccCCEEEEE
Confidence 4677776666666444 45555676666555544333 334456776554322 45666666433356777777
Q ss_pred CCCC
Q 022213 188 NPGN 191 (301)
Q Consensus 188 ~p~n 191 (301)
.++.
T Consensus 79 ~~~~ 82 (140)
T 3fwz_A 79 IPNG 82 (140)
T ss_dssp CSCH
T ss_pred CCCh
Confidence 7653
No 454
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=30.15 E-value=36 Score=32.37 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
.++++++++.|+++|+-||.|-++-....
T Consensus 116 ~~dfk~Lv~~aH~~GikVilD~V~NHts~ 144 (683)
T 3bmv_A 116 FTDFQNLINTAHAHNIKVIIDFAPNHTSP 144 (683)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccccccc
Confidence 78999999999999999999999876543
No 455
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=30.14 E-value=36 Score=32.39 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
.++++++++.|+++|+-||.|-++-....
T Consensus 115 ~~dfk~Lv~~aH~~GI~VilD~V~NHts~ 143 (686)
T 1d3c_A 115 IADFQNLIAAAHAKNIKVIIDFAPNHTSP 143 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCcCcccc
Confidence 78999999999999999999999876543
No 456
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=30.11 E-value=36 Score=32.34 Aligned_cols=29 Identities=17% Similarity=0.205 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
.++++++++.|+++|+-||.|-++-....
T Consensus 111 ~~df~~Lv~~aH~~GIkVilD~V~NHts~ 139 (680)
T 1cyg_A 111 LSDFQRLVDAAHAKGIKVIIDFAPNHTSP 139 (680)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCCc
Confidence 78999999999999999999999876543
No 457
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=29.97 E-value=2.2e+02 Score=23.61 Aligned_cols=42 Identities=14% Similarity=0.291 Sum_probs=27.2
Q ss_pred CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 130 PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 130 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
++..+++..+.|. .+++.+|++...+.- .+..+.+..+.+++
T Consensus 189 ~~~~~v~~H~af~---Yf~~~yGl~~~~~~~---~~~eps~~~l~~l~ 230 (291)
T 1pq4_A 189 PQRKFIVFHPSWA---YFARDYNLVQIPIEV---EGQEPSAQELKQLI 230 (291)
T ss_dssp SCCEEEESSCCCH---HHHHHTTCEEEESCB---TTBCCCHHHHHHHH
T ss_pred CCCEEEEECCchH---HHHHHCCCEEeeccc---CCCCCCHHHHHHHH
Confidence 5678888887765 566889998765532 12346666666544
No 458
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=29.97 E-value=1.1e+02 Score=24.83 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=21.3
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~ 138 (301)
...+++|.++...=..+.+.|.+.|.+|++..
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLA 47 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 34566666665555667777878887777654
No 459
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=29.95 E-value=1.5e+02 Score=24.53 Aligned_cols=53 Identities=13% Similarity=0.136 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCH---HHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGC---KQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~---~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
.+=|+++.+...+..+ ..-.|+++.|+ .++++.+-++-.-.-|.|++..|.|.
T Consensus 52 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 107 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVN---GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYN 107 (289)
T ss_dssp HHHHHHHHHHHHHHHT---TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 3445555555443211 12236665554 66676665554323489999999886
No 460
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=29.86 E-value=2.6e+02 Score=23.74 Aligned_cols=96 Identities=14% Similarity=0.035 Sum_probs=50.0
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCc----------chHHHHHhcCceEEEeecCCCCCCCCCHHHHHh
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP----------YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA 175 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 175 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-. .....++..+.++..+..+- -|.+.+++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv-----~d~~~v~~ 118 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDV-----RDEQQISA 118 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHH
Confidence 3344666666555456677777888988776533222 12233445566776665533 35566555
Q ss_pred hccc------CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 176 LADK------NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 176 ~~~~------~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
++++ +...++ ++. ....+ ...+.++++++.+
T Consensus 119 ~~~~~~~~~g~iDilV-nnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILV-NNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 5432 344444 433 22111 2355666655443
No 461
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=29.83 E-value=2e+02 Score=22.54 Aligned_cols=68 Identities=16% Similarity=-0.001 Sum_probs=36.4
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-..... .++..+.++..+..+- -|.+.++++++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 80 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALAD 80 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHH
Confidence 34456777665555567777788888887765433222211 1222344555444422 35566666553
No 462
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=29.76 E-value=2e+02 Score=22.36 Aligned_cols=31 Identities=23% Similarity=0.129 Sum_probs=20.7
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
.+++|.|+...-..+.+.|.+.|..|++..-
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 4666666555556667777778888776543
No 463
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=29.69 E-value=37 Score=32.30 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
.++++++++.|+++|+-||.|-++-...
T Consensus 107 ~~df~~Lv~~aH~~GikVilD~V~NHts 134 (686)
T 1qho_A 107 WTTFDTLVNDAHQNGIKVIVDFVPNHST 134 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 7899999999999999999999987644
No 464
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=29.65 E-value=38 Score=31.16 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLVVNHTS 105 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 47899999999999999999999986543
No 465
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=29.47 E-value=2.2e+02 Score=22.89 Aligned_cols=67 Identities=19% Similarity=0.043 Sum_probs=36.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HHhcCceEEEeecCCCCCCCCCHHHHHhhc
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (301)
....+++|.++...=..+.+.|.+.|.+|++..-.-...... +...+.++..+..+- -|.+.+++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 89 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-----LSRTERDKLM 89 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 344567776665555677777878898887654332222222 222355555554432 3455555544
No 466
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=29.32 E-value=1.8e+02 Score=24.01 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=50.5
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-CccE
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAA 183 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 183 (301)
.|++|.++.-.=..+++.|.+.|..|++..-.-..... .....+..+..+..+- -|.+.++++++. +...
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDV-----SDERALARIFDAHPITA 81 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT-----TCHHHHHHHHHHSCCCE
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeec-----CCHHHHHHHHhccCCcE
Confidence 56777665544466677777788887765432222111 1111233333333221 467778877754 4555
Q ss_pred EEEcCCCCCcccC-C--------CHHHHHHHHHHHHhCCC
Q 022213 184 MVIINPGNPCGNV-F--------TYHHLQEIAEMARKLRV 214 (301)
Q Consensus 184 v~l~~p~nptG~~-~--------~~~~l~~i~~~~~~~~~ 214 (301)
++-+......+.. - +..-...+++.|++.++
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5443322221111 0 11223567788887763
No 467
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=29.24 E-value=2.3e+02 Score=22.98 Aligned_cols=33 Identities=21% Similarity=0.160 Sum_probs=21.7
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPG 140 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~ 140 (301)
..+++|.++...=..+.+.|.+.|.+|++..-.
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~ 56 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHN 56 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 456666666555567777777788887765433
No 468
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=29.04 E-value=94 Score=26.40 Aligned_cols=73 Identities=8% Similarity=-0.035 Sum_probs=37.7
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCC-CCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEE
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARP-GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV 185 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 185 (301)
...|++|.++.-.=..++..|.+. |..|.+..-.-..........+++++..++. -|.+.++++++ +...|+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~------~d~~~~~~~~~-~~d~Vi 96 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDIT------INKEWVEYHVK-KCDVIL 96 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTT------TCHHHHHHHHH-HCSEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccC------CCHHHHHHHhc-cCCEEE
Confidence 346888776444444555666554 7776655433222222222345555544431 15677777665 355555
Q ss_pred E
Q 022213 186 I 186 (301)
Q Consensus 186 l 186 (301)
-
T Consensus 97 h 97 (372)
T 3slg_A 97 P 97 (372)
T ss_dssp E
T ss_pred E
Confidence 3
No 469
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=28.97 E-value=96 Score=24.60 Aligned_cols=35 Identities=11% Similarity=0.173 Sum_probs=24.7
Q ss_pred CccEEEEcCC--CCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 180 NTAAMVIINP--GNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 180 ~~~~v~l~~p--~nptG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
.+.+++ |-- -|..|.... +.++.+++++||+.+|.
T Consensus 158 ~Pa~vi-cEiv~~~~dG~mar---~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAI-CEIVSQKDEGSMAH---TDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEE-EEBBCSSSTTSBCC---HHHHHHHHHHHTCEEEE
T ss_pred CceEEE-EEEeeeCCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 455554 444 678899999 56666677799998874
No 470
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=28.95 E-value=27 Score=24.12 Aligned_cols=24 Identities=21% Similarity=0.216 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCCCeEEEccCCccc
Q 022213 202 LQEIAEMARKLRVMVVADEVYGHL 225 (301)
Q Consensus 202 l~~i~~~~~~~~~~ii~D~~y~~~ 225 (301)
-++|.++++++|+.++.|..-...
T Consensus 44 A~~I~~~A~e~gVPi~e~~~LAr~ 67 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPLAHQ 67 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHHHHH
T ss_pred HHHHHHHHHHcCCeEEECHHHHHH
Confidence 578888899999999999876543
No 471
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=28.86 E-value=1.5e+02 Score=26.50 Aligned_cols=95 Identities=12% Similarity=0.034 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCc----chHHHHHhcC-ceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCC
Q 022213 116 CKQAVEVILSVLARPGANVLLPRPGWP----YYEGIAQRKQ-VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190 (301)
Q Consensus 116 ~~~al~~~~~~l~~~gd~Vl~~~p~~~----~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 190 (301)
+.++++.....+ ++-+.+.+++|... +|..+.+..+ +.+. -++-+..+++.+++.++.+..-+++.-++
T Consensus 281 ~~elid~y~~ll-e~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~Iv-----GDEl~vTn~~~i~~~Ie~~a~n~IlIKvn 354 (441)
T 3qtp_A 281 VDGLIAEYVDYG-KHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIV-----GDDLLVTNPARVQMAMDKNACNSVLIKVN 354 (441)
T ss_dssp HHHHHHHHHHHH-HHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEE-----ESTTTTTCHHHHHHHHHHTCCSEEEECGG
T ss_pred HHHHHHHHHHHh-hhcceeeecCCCChHHHHHHHHHHHhcCCceEE-----eccccccCHHHHHHHHHcCCCCEEEeccc
Confidence 466666555444 33457889888754 5666666666 3322 12223457889988887654444555555
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 022213 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (301)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~ii~D~ 220 (301)
.-.|.+ +..+++++|+++|+.+++=.
T Consensus 355 qiGGIT----Ealkaa~lA~~~G~~vmvsH 380 (441)
T 3qtp_A 355 QIGTLT----ETFKTIKMAQEKGWGVMASH 380 (441)
T ss_dssp GTCCHH----HHHHHHHHHHHTTCEEEEEC
T ss_pred ccccHH----HHHHHHHHHHHcCCeEEEeC
Confidence 544433 58899999999998776533
No 472
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=28.80 E-value=1.2e+02 Score=22.76 Aligned_cols=69 Identities=17% Similarity=0.176 Sum_probs=39.2
Q ss_pred HHHHh-cCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEc
Q 022213 146 GIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (301)
Q Consensus 146 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~D 219 (301)
..++. .|+++..+.-.++. -+. .+.+.+.++..-+++..| .|.|......+...|.+.|-.|++.++.-
T Consensus 50 ~~L~e~~Gl~v~~v~k~~eG---G~p-~I~d~I~~geIdlVInt~-~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 50 NLISRATGMNVNAMLSGPMG---GDQ-QVGALISEGKIDVLIFFW-DPLNAVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp HHHHHHHCCCCEEECCGGGT---HHH-HHHHHHHTTCCCEEEEEC-CTTSCCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred HHHHHHhCceeEEEEecCCC---CCc-hHHHHHHCCCccEEEEcC-CcccCCcccccHHHHHHHHHHcCCCEEeC
Confidence 44444 67776665321211 122 455555554443444444 34453232788999999999999987743
No 473
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=28.66 E-value=41 Score=31.38 Aligned_cols=29 Identities=24% Similarity=0.282 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 86 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 114 (589)
T 3aj7_A 86 TNEDCFALIEKTHKLGMKFITDLVINHCS 114 (589)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 46899999999999999999999987654
No 474
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=28.41 E-value=2.2e+02 Score=22.57 Aligned_cols=32 Identities=34% Similarity=0.332 Sum_probs=21.7
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcC
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~ 138 (301)
...+++|.++...=..+.+.|.+.|.+|++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCD 37 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34567776665555677777878888877654
No 475
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=28.40 E-value=2.2e+02 Score=23.59 Aligned_cols=100 Identities=13% Similarity=0.019 Sum_probs=47.6
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-cCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEE
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMV 185 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 185 (301)
..|++|.++...=..+++.|.+.|..|++..-.-......... .++..+..++ .|.+.+++++++ +..+|+
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl-------~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSV-------TDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCT-------TCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeC-------CCHHHHHHHHhhcCCCEEE
Confidence 3577776654444566677777787776543211111111111 2333333332 356777776653 456655
Q ss_pred EcCCCCCcccC------CCHHHHHHHHHHHHhCCC
Q 022213 186 IINPGNPCGNV------FTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 186 l~~p~nptG~~------~~~~~l~~i~~~~~~~~~ 214 (301)
-+......+.. .+..-...+++.|.+.++
T Consensus 94 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 128 (330)
T 2pzm_A 94 HSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGV 128 (330)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTC
T ss_pred ECCccCCCccccChhHHHHHHHHHHHHHHHHHcCC
Confidence 44322211100 011123567777776654
No 476
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=28.33 E-value=41 Score=32.09 Aligned_cols=29 Identities=14% Similarity=0.309 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 310 t~~df~~Lv~~aH~~GikVilD~V~NHts 338 (696)
T 4aee_A 310 TMEDFEKLVQVLHSRKIKIVLDITMHHTN 338 (696)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccC
Confidence 57899999999999999999999987543
No 477
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=28.32 E-value=38 Score=31.26 Aligned_cols=29 Identities=24% Similarity=0.342 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 77 t~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 105 (555)
T 2ze0_A 77 TMDDFDELLAQAHRRGLKVILDLVINHTS 105 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 37899999999999999999999886543
No 478
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=28.22 E-value=41 Score=27.90 Aligned_cols=24 Identities=17% Similarity=0.357 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccC
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEV 221 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~ 221 (301)
..+.++++++.|.++|+.+|+|--
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 467899999999999999999854
No 479
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=28.14 E-value=2.2e+02 Score=22.51 Aligned_cols=64 Identities=16% Similarity=0.057 Sum_probs=33.3
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 110 VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
+++|.++...-..+.+.|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 66 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDV-----RNRAAIEEMLA 66 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHH
Confidence 55665554444666677777888887754332222333333333444444322 35566665543
No 480
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=28.11 E-value=62 Score=25.95 Aligned_cols=92 Identities=12% Similarity=0.060 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-----CccEEEEcCC
Q 022213 117 KQAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----NTAAMVIINP 189 (301)
Q Consensus 117 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~l~~p 189 (301)
|.++...+..+...|.+|++..|....- ..++.+.|+....+++ ...+++.+.+.+ +...|++...
T Consensus 26 TT~ll~~~~r~~~~g~kVli~~~~~d~r~~~~i~srlG~~~~~~~~-------~~~~~i~~~i~~~~~~~~~dvViIDEa 98 (223)
T 2b8t_A 26 TAELIRRLHRLEYADVKYLVFKPKIDTRSIRNIQSRTGTSLPSVEV-------ESAPEILNYIMSNSFNDETKVIGIDEV 98 (223)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCGGGCSSCCCCCCCSSCCEEE-------SSTHHHHHHHHSTTSCTTCCEEEECSG
T ss_pred HHHHHHHHHHHHhcCCEEEEEEeccCchHHHHHHHhcCCCcccccc-------CCHHHHHHHHHHHhhCCCCCEEEEecC
Confidence 4444444444445677888776665421 1233334433222222 122333333322 3567777766
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEccC
Q 022213 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEV 221 (301)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~ii~D~~ 221 (301)
+. ++.+.++.+..++. .++.+|.=.-
T Consensus 99 Q~-----l~~~~ve~l~~L~~-~gi~Vil~Gl 124 (223)
T 2b8t_A 99 QF-----FDDRICEVANILAE-NGFVVIISGL 124 (223)
T ss_dssp GG-----SCTHHHHHHHHHHH-TTCEEEEECC
T ss_pred cc-----CcHHHHHHHHHHHh-CCCeEEEEec
Confidence 54 45566666666565 4887776444
No 481
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=27.88 E-value=2e+02 Score=23.45 Aligned_cols=34 Identities=21% Similarity=0.132 Sum_probs=21.8
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG 140 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~ 140 (301)
...+++|.++...=..+.+.|.+.|.+|++..-.
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 66 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR 66 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3456666665544466677777889888876544
No 482
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=27.86 E-value=29 Score=24.02 Aligned_cols=26 Identities=23% Similarity=0.244 Sum_probs=20.7
Q ss_pred HHHHHHHHHhCCCeEEEccCCccccc
Q 022213 202 LQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 202 l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
-++|.++++++|+.++.|..-.-..|
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LAr~Ly 54 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKLARSLF 54 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeecCHHHHHHHH
Confidence 57888889999999999987664333
No 483
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=27.82 E-value=2.2e+02 Score=23.10 Aligned_cols=32 Identities=28% Similarity=0.234 Sum_probs=21.3
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 139 (301)
..+++|.++...-..+.+.|.+.|.+|++..-
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 45677766555556666777778888877643
No 484
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=27.65 E-value=1.2e+02 Score=24.24 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=24.0
Q ss_pred CccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 180 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
.+.+++ |---|..|.... +.++.+++++|++.+|.
T Consensus 167 ~Pa~vi-cEi~~~dG~mar---~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVL-CELTNDDGTMAR---APECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEE-EEBBCTTSSBCC---HHHHHHHHHHTTCEEEE
T ss_pred CceEEE-EEEeCCCCCccC---HHHHHHHHHHcCCCEEE
Confidence 455554 433467899988 56666677799988764
No 485
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=27.43 E-value=77 Score=29.69 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
-+.++++++++.|+++|+-||.|-++....
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 231 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILDWVPGHFP 231 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECTTSCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 457999999999999999999999998763
No 486
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=27.38 E-value=2.1e+02 Score=22.05 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=46.9
Q ss_pred CEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcC
Q 022213 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188 (301)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 188 (301)
+|++..++.-+... .+.|.+.|..|.+.+........+.+..+..+..-+. .+.+.++++--++.+.++++.
T Consensus 2 ~iiIiG~G~~G~~l-a~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~-------~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 2 KVIIIGGETTAYYL-ARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDG-------SHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CEEEECCHHHHHHH-HHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCT-------TSHHHHHHHTCCTTCEEEECC
T ss_pred EEEEECCCHHHHHH-HHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCC-------CCHHHHHhcCcccCCEEEEec
Confidence 36666666655544 4455556766665554443333344445665543221 466777765334567777766
Q ss_pred CCCCcccCCCHHHHHHHHHHHHh
Q 022213 189 PGNPCGNVFTYHHLQEIAEMARK 211 (301)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~ 211 (301)
++. +.-..++..+++
T Consensus 74 ~~d--------~~n~~~~~~a~~ 88 (218)
T 3l4b_C 74 PRD--------EVNLFIAQLVMK 88 (218)
T ss_dssp SCH--------HHHHHHHHHHHH
T ss_pred CCc--------HHHHHHHHHHHH
Confidence 542 223445555655
No 487
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=27.33 E-value=1e+02 Score=25.64 Aligned_cols=74 Identities=16% Similarity=0.097 Sum_probs=45.3
Q ss_pred CCCEEEEcCCCCcchHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcccCccEEEEcCC--CCCcccCCCHHHHHHHHH
Q 022213 130 PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP--GNPCGNVFTYHHLQEIAE 207 (301)
Q Consensus 130 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p--~nptG~~~~~~~l~~i~~ 207 (301)
.|++|.+-- |.++...+...+.++..++.++..+. ...+.-+..+ ++...++++.- -|-| +..|++
T Consensus 140 ~g~kV~vIG--~fP~i~~~~~~~~~l~V~E~~p~~g~-~p~~~~~~~l-p~~D~viiTgstlvN~T--------l~~lL~ 207 (270)
T 3l5o_A 140 KGKKVGVVG--HFPHLESLLEPICDLSILEWSPEEGD-YPLPASEFIL-PECDYVYITCASVVDKT--------LPRLLE 207 (270)
T ss_dssp TTSEEEEES--CCTTHHHHHTTTSEEEEEESSCCTTC-EEGGGHHHHG-GGCSEEEEETHHHHHTC--------HHHHHH
T ss_pred CCCEEEEEC--CchhHHHHHhcCCCEEEEECCCCCCC-CChhHHHHhh-ccCCEEEEEeehhhcCC--------HHHHHh
Confidence 578888875 33555555666788888888775442 2222223333 35677776533 3445 999999
Q ss_pred HHHhCCCe
Q 022213 208 MARKLRVM 215 (301)
Q Consensus 208 ~~~~~~~~ 215 (301)
+|++....
T Consensus 208 ~~~~a~~v 215 (270)
T 3l5o_A 208 LSRNARRI 215 (270)
T ss_dssp HTTTSSEE
T ss_pred hCCCCCEE
Confidence 99754433
No 488
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=27.30 E-value=1.4e+02 Score=24.86 Aligned_cols=100 Identities=16% Similarity=0.061 Sum_probs=48.2
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-cCceEEEeecCCCCCCCCCHHHHHhhccc-CccEEE
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMV 185 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 185 (301)
..|++|.++.-.-..++..|.+.|..|.+..-.-......+.. .++..+..++ .|.+.++++++. +...|+
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl-------~d~~~~~~~~~~~~~D~vi 94 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSI-------ADHALVNQLIGDLQPDAVV 94 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCT-------TCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeC-------CCHHHHHHHHhccCCcEEE
Confidence 4577776654444566666777787776543221111111111 2333333332 356677776653 356555
Q ss_pred EcCCCCCcccC------CCHHHHHHHHHHHHhCCC
Q 022213 186 IINPGNPCGNV------FTYHHLQEIAEMARKLRV 214 (301)
Q Consensus 186 l~~p~nptG~~------~~~~~l~~i~~~~~~~~~ 214 (301)
-+......+.. .+......+++.|.+.++
T Consensus 95 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 129 (333)
T 2q1w_A 95 HTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNV 129 (333)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ECceecCCCccCChHHHHHHHHHHHHHHHHHHhCC
Confidence 44322211100 011224577888887764
No 489
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=27.28 E-value=2.5e+02 Score=22.80 Aligned_cols=95 Identities=17% Similarity=0.095 Sum_probs=49.6
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH---hcCceEEEeecCCCCCCCCCHHHHHhhccc----
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ---RKQVEVRHFDLLPERNWEVDLDAVEALADK---- 179 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 179 (301)
...+++|.+++..=..+.+.|.+.|.+|++..-.-.......+ ..+.++..+..+- -|.+.++++++.
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDV-----GDEALHEALVELAVRR 82 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3456666666555567777788889888877544333333332 2355555554432 345555554432
Q ss_pred --CccEEEEcCCC--CCcc--cCCCHHHHHHHHH
Q 022213 180 --NTAAMVIINPG--NPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 --~~~~v~l~~p~--nptG--~~~~~~~l~~i~~ 207 (301)
+...+ +++.. .+.+ ...+.+++++..+
T Consensus 83 ~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 83 FGGLDTA-FNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp HSCCCEE-EECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCCChhhCCHHHHHHHHH
Confidence 34444 34432 1222 2356666665544
No 490
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=27.24 E-value=83 Score=24.66 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=27.6
Q ss_pred CHHHHHhhcccCccEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 022213 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (301)
Q Consensus 169 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ii~ 218 (301)
+.+.|+++++.....+|+.. |.+.+ ++++++.+++++-.+++
T Consensus 18 ~~~~l~~al~s~~~~ifll~-----g~i~~---l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILELDLTYMVMLE-----THVAQ---LKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTTSSCCEEEECS-----EETTT---HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcCCCCEEEEec-----CcHHH---HHHHHHHHHHcCCeEEE
Confidence 56778887776666666644 33344 77888888888755443
No 491
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=27.14 E-value=1.3e+02 Score=25.39 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCC---HHHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
.+=|+++.+...+..+ ..-.|+++.| ..++++.+-++-.-.-|.|++..|.|.
T Consensus 74 ~~Er~~v~~~~v~~~~---grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~ 129 (315)
T 3si9_A 74 HEEHKRIIELCVEQVA---KRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYN 129 (315)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 3445555555443211 1234666544 566666665554333499999999886
No 492
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=26.92 E-value=2.6e+02 Score=22.85 Aligned_cols=97 Identities=14% Similarity=0.058 Sum_probs=52.3
Q ss_pred CCCCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCc-----chHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc-
Q 022213 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-----YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK- 179 (301)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (301)
....+++|.|+...=..+.+.|.+.|.+|++..-.-. ......+..+.++..+..+- -|.+.++++++.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDL-----SDESFARSLVHKA 122 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecC-----CCHHHHHHHHHHH
Confidence 3445677776665557777788888988887543311 11223344566666655432 345555554432
Q ss_pred -----CccEEEEcCCC--CCcc--cCCCHHHHHHHHHH
Q 022213 180 -----NTAAMVIINPG--NPCG--NVFTYHHLQEIAEM 208 (301)
Q Consensus 180 -----~~~~v~l~~p~--nptG--~~~~~~~l~~i~~~ 208 (301)
+...++ ++.. .+.+ ...+.+++++..+.
T Consensus 123 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 123 REALGGLDILA-LVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHTCCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 345444 4332 1122 24577777776653
No 493
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=26.87 E-value=2.8e+02 Score=23.17 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCEEEcCCH---HHHHHHHHHHhcCCCCEEEEcCCCCc
Q 022213 87 PPARRAIADYLSRDLPYKLSADDVYVTLGC---KQAVEVILSVLARPGANVLLPRPGWP 142 (301)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~---~~al~~~~~~l~~~gd~Vl~~~p~~~ 142 (301)
.+=|+++.+...+..+ ..-.|+++.|+ .++++.+-.+-.-.-|.|++..|.|.
T Consensus 64 ~eEr~~vi~~~~~~~~---grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~ 119 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVD---GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYN 119 (306)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 3445555555443211 12247776554 66776665554323489999999885
No 494
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=26.85 E-value=2.4e+02 Score=22.36 Aligned_cols=66 Identities=30% Similarity=0.217 Sum_probs=35.6
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCc-chHHHHHhcCceEEEeecCCCCCCCCCHHHHHhhcc
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (301)
..+++|.++...=..+.+.|.+.|.+|++..-.-. .....+...+.++..+..+- -|.+.++++++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~ 71 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFA 71 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHH
Confidence 35666666655556777777788988876533221 11222233355555554432 35566665553
No 495
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=26.57 E-value=77 Score=30.34 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEccCCccccc
Q 022213 199 YHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (301)
Q Consensus 199 ~~~l~~i~~~~~~~~~~ii~D~~y~~~~~ 227 (301)
.++++++++.|+++|+-||.|-+|.....
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~NH~~~ 294 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYNHTAE 294 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 68999999999999999999999986553
No 496
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=26.52 E-value=2.5e+02 Score=22.49 Aligned_cols=31 Identities=19% Similarity=0.075 Sum_probs=21.6
Q ss_pred CCCEEEcCCHHHHHHHHHHHhcCCCCEEEEc
Q 022213 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (301)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~ 137 (301)
...+++|.++...-..+.+.|.+.|.+|++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 38 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDL 38 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 3457777766655567777788888887764
No 497
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=26.40 E-value=47 Score=31.38 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCcccc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~~~~ 226 (301)
+.++++++++.|+++|+-||.|-++-...
T Consensus 154 t~~df~~Lv~~aH~~GI~VilD~V~NH~s 182 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLCADFVLNHTA 182 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 47899999999999999999999986543
No 498
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=26.35 E-value=2.5e+02 Score=22.42 Aligned_cols=94 Identities=13% Similarity=0.029 Sum_probs=47.1
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEc-CCCCcchH---HHHHhcCceEEEeecCCCCCCCCCHHHHHhhccc----
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLP-RPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---- 179 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~-~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 179 (301)
..+++|.|+...=..+.+.|.+.|.+|++. ...-.... ..+...+.++..+..+- -|.+.+++.++.
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDV-----ANREQCREVLEHEIAQ 101 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 456666666555567777788889887553 22222222 22233455555555432 355555554432
Q ss_pred --CccEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 022213 180 --NTAAMVIINP-GNPCG--NVFTYHHLQEIAE 207 (301)
Q Consensus 180 --~~~~v~l~~p-~nptG--~~~~~~~l~~i~~ 207 (301)
+...++ .+. ....+ ...+.+++++..+
T Consensus 102 ~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 102 HGAWYGVV-SNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp HCCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCccEEE-ECCCCCCCCccccCCHHHHHHHHH
Confidence 344444 333 22112 1346666665443
No 499
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=26.34 E-value=2.9e+02 Score=23.26 Aligned_cols=95 Identities=14% Similarity=0.094 Sum_probs=47.7
Q ss_pred CCEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHHh-cCceEEEee-cCCCCCCCCCHHHHHhhcccCccEE
Q 022213 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY-EGIAQR-KQVEVRHFD-LLPERNWEVDLDAVEALADKNTAAM 184 (301)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~v 184 (301)
..|++|.++...=..+++.|.+.|..|....-.-... ...+.. .+++++..+ + -|.+.+.++++ ....+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l-------~d~~~l~~~~~-~~d~V 77 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLL-------NNVPLMDTLFE-GAHLA 77 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCT-------TCHHHHHHHHT-TCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCcc-------CCHHHHHHHHh-cCCEE
Confidence 4677776654444556666666776665432111111 111221 244444333 2 36677777765 35666
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 022213 185 VIINPGNPCGNVFTYHHLQEIAEMARKLR 213 (301)
Q Consensus 185 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~ 213 (301)
+.+..... .. .. ..-+.+++.|++.+
T Consensus 78 i~~a~~~~-~~-~~-~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 78 FINTTSQA-GD-EI-AIGKDLADAAKRAG 103 (352)
T ss_dssp EECCCSTT-SC-HH-HHHHHHHHHHHHHS
T ss_pred EEcCCCCC-cH-HH-HHHHHHHHHHHHcC
Confidence 54433211 11 11 22377888888776
No 500
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=26.21 E-value=47 Score=28.67 Aligned_cols=26 Identities=15% Similarity=0.287 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccCCc
Q 022213 198 TYHHLQEIAEMARKLRVMVVADEVYG 223 (301)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~ii~D~~y~ 223 (301)
..+.+.++++.|.++|+.+|+|--..
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 47889999999999999999987543
Done!