BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022215
(301 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AYB3|ISY1_RAT Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus GN=Isy1
PE=2 SV=1
Length = 284
Score = 245 bits (626), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/299 (50%), Positives = 198/299 (66%), Gaps = 17/299 (5%)
Query: 1 MARNEEKAQSMLNRYIALQAEEKKKPKERRPYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EKA + L R+ Q EE K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1 MARNAEKAMTALARFRQAQLEEGKV-KERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN GLGE R+RDLNDEINKL+REKGHWE RI ELGGP+Y K KM D EG V P
Sbjct: 60 IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 115
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180
R GY+YFGAAK LPGVRELFEK P R+TR ++ K ID YYGY D++DGV+ +
Sbjct: 116 GNR--GYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 173
Query: 181 EGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASVMGQVN-EILKEGEEDVVLEERM 239
E E+ +RA+ V++W+ ++EA EE ++N + E E D EE
Sbjct: 174 EQEYEKRLRAELVEKWK----AEREARLARGEKEEEEEEEEINIYAVTEEESD---EEGS 226
Query: 240 REMEIERKEKEREFVVHVPLPDDKEIEKMVIERKKMELLKKYATEEFVEEQNEAKAMLN 298
+E E + +++F+ HVP+P +EIE+ ++ RKKMELL+KYA+E + EAK +L
Sbjct: 227 QEKAGE--DGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLG 283
>sp|Q69ZQ2|ISY1_MOUSE Pre-mRNA-splicing factor ISY1 homolog OS=Mus musculus GN=Isy1 PE=1
SV=2
Length = 285
Score = 244 bits (624), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/298 (48%), Positives = 197/298 (66%), Gaps = 14/298 (4%)
Query: 1 MARNEEKAQSMLNRYIALQAEEKKKPKERRPYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EKA + L R+ Q EE K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1 MARNAEKAMTALARFRQAQLEEGKV-KERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN GLGE R+RDLNDEINKL+REKGHWE RI ELGGP+Y K KM D EG V P
Sbjct: 60 IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 115
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180
R GY+YFGAAK LPGVRELFEK P R+TR ++ K ID YYGY D++DGV+ +
Sbjct: 116 GNR--GYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 173
Query: 181 EGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASVMGQVNEILKEGEEDVVLEERMR 240
E E+++RA+ V++W+ E + A + EE + + +E ++ +E+
Sbjct: 174 EQEYEKKLRAELVEKWKAEREARL-ARGEKEEEEEEEEEINIYAVTEEESDEEGNQEKAG 232
Query: 241 EMEIERKEKEREFVVHVPLPDDKEIEKMVIERKKMELLKKYATEEFVEEQNEAKAMLN 298
E + +++F+ HVP+P +EIE+ ++ RKKMELL+KYA+E + EAK +L
Sbjct: 233 E------DGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAKRLLG 284
>sp|Q9ULR0|ISY1_HUMAN Pre-mRNA-splicing factor ISY1 homolog OS=Homo sapiens GN=ISY1 PE=1
SV=3
Length = 285
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/301 (49%), Positives = 195/301 (64%), Gaps = 20/301 (6%)
Query: 1 MARNEEKAQSMLNRYIALQAEEKKKPKERRPYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARN EKA + L R+ Q EE K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+
Sbjct: 1 MARNAEKAMTALARFRQAQLEEGKV-KERRPFLASECTELPKAEKWRRQIIGEISKKVAQ 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN GLGE R+RDLNDEINKL+REKGHWE RI ELGGP+Y K KM D EG V P
Sbjct: 60 IQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEV----P 115
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180
R GY+YFGAAK LPGVRELFEK P R+TR ++ K ID YYGY D++DGV+ +
Sbjct: 116 GNR--GYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPL 173
Query: 181 EGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASVMGQVNEILKEGEEDVVLEERMR 240
E E+++RA+ V++W K E + GE+ + EI V EE
Sbjct: 174 EQEYEKKLRAELVEKW------KAEREARLARGEKEEEEEEEEEI----NIYAVTEEESD 223
Query: 241 EMEIERK---EKEREFVVHVPLPDDKEIEKMVIERKKMELLKKYATEEFVEEQNEAKAML 297
E + K + +++F+ HVP+P +EIE+ ++ RKKMELL+KYA+E + EA+ +L
Sbjct: 224 EEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLL 283
Query: 298 N 298
Sbjct: 284 G 284
>sp|Q54N41|ISY1_DICDI Pre-mRNA-splicing factor ISY1 homolog OS=Dictyostelium discoideum
GN=isy1 PE=3 SV=1
Length = 299
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 144/201 (71%), Gaps = 10/201 (4%)
Query: 1 MARNEEKAQSMLNRYIALQAEEKKKPKERRPYLASECRDLSEADKWRQQIMREIGRKVAE 60
MARNEEKA+SMLNRY+ L+ E K+ +ERRPYL++EC L +A+KWR+QI++EI R + E
Sbjct: 1 MARNEEKAKSMLNRYLQLKGTESKQ-EERRPYLSNECDSLVDAEKWRRQILKEITRGITE 59
Query: 61 IQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNP 120
IQN L E+++RDLND INKL+REKGHWERRI +LGGPN+ K+ D +G P
Sbjct: 60 IQNSALDEYKIRDLNDHINKLVREKGHWERRILQLGGPNHRALAPKLFDADGK-----EP 114
Query: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPEL---RKRRTRYDIYKRIDASYYGYRDDEDGVL 177
G G YRY+G AK LPGV ELFEKP + +++TR D+YK ID+ YYGYRDDEDG L
Sbjct: 115 LGTGT-YRYYGEAKNLPGVAELFEKPEQTLHGTEKKTRQDLYKYIDSDYYGYRDDEDGKL 173
Query: 178 ERVEGPAEREMRAKAVQEWRR 198
E +E E+ + V+ W++
Sbjct: 174 EEIEREYEKYAIEQNVENWKK 194
>sp|Q4PEZ0|ISY1_USTMA Pre-mRNA-splicing factor ISY1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=ISY1 PE=3 SV=1
Length = 351
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 118/182 (64%), Gaps = 13/182 (7%)
Query: 1 MARNEEKAQSMLNRYIALQAEE---KKKPKERRPYLASECRDLSEADKWRQQIMREIGRK 57
MARN+EKAQSML R+ QA KP RRP LAS L E ++WR ++REI RK
Sbjct: 1 MARNQEKAQSMLYRFREAQATSLGVSTKPA-RRPRLASSVSSLKECERWRSDVIREISRK 59
Query: 58 VAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDV 117
V++IQ+ GL ++ +RDLNDEINKL+REKGHWE +I LGG NY + M + +V
Sbjct: 60 VSKIQDFGLNDYEVRDLNDEINKLLREKGHWENQIVALGGANYKRGVPSMLGDDKGVV-- 117
Query: 118 PNPSGRGPGYRYFGAAKKLPGVRELF--EKPPELRKRRTRYDIYKRIDASYYGYRDDEDG 175
GRG GY+YFG AK LPGV+ELF +K E + RY+ ++ + SYYG D++DG
Sbjct: 118 ----GRG-GYKYFGRAKDLPGVKELFTSQKADEAGRSEERYERFRNLPPSYYGDEDEDDG 172
Query: 176 VL 177
+L
Sbjct: 173 LL 174
>sp|P0CO36|ISY1_CRYNJ Pre-mRNA-splicing factor ISY1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ISY1 PE=3 SV=1
Length = 348
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 14/182 (7%)
Query: 1 MARNEEKAQSMLNRYIALQAEE----KKKPKERRPYLASECRDLSEADKWRQQIMREIGR 56
MARN EKAQSML R+ QA + ++ +RRP +AS C L EA++WR I+R+I R
Sbjct: 1 MARNSEKAQSMLYRFREQQAIDMGIGTRQKGDRRPRMASSCTSLREAERWRGDILRDISR 60
Query: 57 KVAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVD 116
KV++IQ+ L ++++RDLNDEIN+L REK WE +I LGG NY + MTD EG V
Sbjct: 61 KVSKIQDVALTDYQVRDLNDEINQLFREKRAWENQIINLGGANYRRAAGVMTDDEGREV- 119
Query: 117 VPNPSGRGPGYRYFGAAKKLPGVRELF----EKPPELRKRRTRYDIYKRIDASYYGYRDD 172
P R GY+YFG AK+LPGV+ELF ++ E R + +++ YYG D+
Sbjct: 120 ---PGTR--GYKYFGRAKELPGVKELFTRSTQQATEESARTASFQMFRHQGPDYYGDEDE 174
Query: 173 ED 174
D
Sbjct: 175 LD 176
>sp|P0CO37|ISY1_CRYNB Pre-mRNA-splicing factor ISY1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ISY1 PE=3 SV=1
Length = 348
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 14/182 (7%)
Query: 1 MARNEEKAQSMLNRYIALQAEE----KKKPKERRPYLASECRDLSEADKWRQQIMREIGR 56
MARN EKAQSML R+ QA + ++ +RRP +AS C L EA++WR I+R+I R
Sbjct: 1 MARNSEKAQSMLYRFREQQAIDMGIGTRQKGDRRPRMASSCTSLREAERWRGDILRDISR 60
Query: 57 KVAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVD 116
KV++IQ+ L ++++RDLNDEIN+L REK WE +I LGG NY + MTD EG V
Sbjct: 61 KVSKIQDVALTDYQVRDLNDEINQLFREKRAWENQIINLGGANYRRAAGVMTDDEGREV- 119
Query: 117 VPNPSGRGPGYRYFGAAKKLPGVRELF----EKPPELRKRRTRYDIYKRIDASYYGYRDD 172
P R GY+YFG AK+LPGV+ELF ++ E R + +++ YYG D+
Sbjct: 120 ---PGTR--GYKYFGRAKELPGVKELFTRSTQQATEESARTASFQMFRHQGPDYYGDEDE 174
Query: 173 ED 174
D
Sbjct: 175 LD 176
>sp|Q7SHY8|ISY1_NEUCR Pre-mRNA-splicing factor isy-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=isy-1 PE=3 SV=1
Length = 239
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 117/182 (64%), Gaps = 13/182 (7%)
Query: 1 MARNEEKAQSMLNRYIALQAEEK---KKPKERRPYLASECRDLSEADKWRQQIMREIGRK 57
MARN EKAQSML R+ QA + + RRP +E + +KWR Q+++EI RK
Sbjct: 1 MARNSEKAQSMLFRFREAQAADLGIIDAGRTRRPRSITEQDSIPACEKWRGQVLKEISRK 60
Query: 58 VAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDV 117
V+ IQ+ L ++++RDLNDEINKL+REK WE +I LGGPNY + K+ D G ++
Sbjct: 61 VSRIQDPALSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYMRSGGKVYDEAGR--EI 118
Query: 118 PNPSGRGPGYRYFGAAKKLPGVRELFE-----KPPELRKRRTRYDIYKRIDASYYGYRDD 172
P G G GY+YFG A++LPGV+ELFE K + + TR D+ K++DA+YYGY D
Sbjct: 119 P---GGGRGYKYFGRARELPGVKELFEAAARAKQDDEKPLETRDDLRKQVDAAYYGYAPD 175
Query: 173 ED 174
E+
Sbjct: 176 EE 177
>sp|Q51LS1|ISY1_MAGO7 Pre-mRNA-splicing factor ISY1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ISY1 PE=3 SV=1
Length = 246
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 115/182 (63%), Gaps = 13/182 (7%)
Query: 1 MARNEEKAQSMLNRYIALQAEEK---KKPKERRPYLASECRDLSEADKWRQQIMREIGRK 57
MARN EKAQSML R+ QA + + RRP +E + +KWR Q++++I RK
Sbjct: 1 MARNSEKAQSMLFRFREAQAADLGIIDAGRTRRPRAITEQDSIPACEKWRGQVLKDISRK 60
Query: 58 VAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKH-FAKMTDLEGNIVD 116
V+ IQ L ++++RDLNDEINKL+REK WE +I LGGPNYT+ AK+ D G +
Sbjct: 61 VSRIQESSLSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYTRAGGAKVYDEAGKEI- 119
Query: 117 VPNPSGRGPGYRYFGAAKKLPGVRELFE----KPPELRKRRTRYDIYKRIDASYYGYRDD 172
G G GYRYFG AK+LPGV+ELFE K + + R D+ K++DA+YYGY D
Sbjct: 120 ----GGAGRGYRYFGRAKELPGVKELFEAARAKKGDEKPLEARDDLRKQVDAAYYGYSPD 175
Query: 173 ED 174
E+
Sbjct: 176 EE 177
>sp|Q5B423|ISY1_EMENI Pre-mRNA-splicing factor isy1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=isy1
PE=3 SV=1
Length = 256
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 117/198 (59%), Gaps = 30/198 (15%)
Query: 1 MARNEEKAQSMLNRYIALQAEEK---KKPKERRPYLASECRDLSEADKWRQQIMREIGRK 57
MARN EKAQSML R+ A QA + + RRP + + +KWR Q+++EI RK
Sbjct: 1 MARNSEKAQSMLFRFRAQQAADLGIIDIGRTRRPKAITSVDSIPACEKWRGQVLKEISRK 60
Query: 58 VAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDV 117
V+ IQ L +H++RDLNDEINKL+REK WE +I +GGPNY + ++ D EG ++
Sbjct: 61 VSRIQEPSLSDHQIRDLNDEINKLMREKWAWEMQIRNMGGPNYMRGSGRVYDDEGR--EI 118
Query: 118 PNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTR----------------YDI-YK 160
P G G GYRYFG A++LPGV+E+ E RR R DI K
Sbjct: 119 P---GGGKGYRYFGRARELPGVKEMLEAA----ARRGRGPAEEEEDDGKTVGRGGDIATK 171
Query: 161 RIDASYYGYR-DDEDGVL 177
++DA+Y+GY D+EDG L
Sbjct: 172 KVDANYFGYGLDEEDGTL 189
>sp|Q4WUJ6|ISY1_ASPFU Pre-mRNA-splicing factor isy1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=isy1 PE=3
SV=1
Length = 243
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 108/183 (59%), Gaps = 21/183 (11%)
Query: 11 MLNRYIALQAEEK---KKPKERRPYLASECRDLSEADKWRQQIMREIGRKVAEIQNEGLG 67
ML R+ A QA + + RRP + + +KWR Q+++EI RKV+ IQ L
Sbjct: 1 MLFRFRAQQAADLGIIDIGRTRRPKAITSVDSIPSCEKWRGQVLKEISRKVSRIQEPSLS 60
Query: 68 EHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNPSGRGPGY 127
++++RDLNDEINKL+REK WE +I LGGPNY + ++ D EG ++P G G GY
Sbjct: 61 DYQIRDLNDEINKLMREKWAWEMQIRNLGGPNYMRGSGRVYDDEGR--EIP---GGGKGY 115
Query: 128 RYFGAAKKLPGVRELFEKPP-----------ELRKRRTRYDI-YKRIDASYYGYR-DDED 174
RYFG A++LPGV+E+FE E + DI K++DA+Y+GY D+ED
Sbjct: 116 RYFGRARELPGVKEMFEAAARRGRRPPEEEEEEEGKGRGGDIATKKVDANYFGYGLDEED 175
Query: 175 GVL 177
G L
Sbjct: 176 GSL 178
>sp|Q6BU51|ISY1_DEBHA Pre-mRNA-splicing factor ISY1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ISY1 PE=3 SV=2
Length = 298
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 152/307 (49%), Gaps = 45/307 (14%)
Query: 1 MARNEEKAQSMLNRYIALQAEE----KKKPKERRPYLASECRDLSEADKWRQQIMREIGR 56
M+RN EKAQS LNR+ AL+ +E + P R Y+ S L +A+KWR I+ EI
Sbjct: 1 MSRNTEKAQSSLNRFQALKNKEAGVLESNPNFRPKYVQS-VDSLPQAEKWRSTIIGEISV 59
Query: 57 KVAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVD 116
K+ +IQ+ L E+++RD+ND +NKL EK WE I LGG +Y HF K + G +
Sbjct: 60 KLTKIQDPALNEYQIRDINDSLNKLFNEKRSWEYHIKNLGGADYM-HFNKDFNNAGKLSQ 118
Query: 117 VPNPSGRGPGYRYFGAAKKLPGVRELF------------EKPPELRKRRTRYDIYKRIDA 164
+ + GYRYFG AK+LP V+E+ + EL + R + +RI A
Sbjct: 119 LDSSGSHIKGYRYFGRAKELPDVKEVLMLQQKKGHANKSKHAKELEQNRLLNEQDQRIKA 178
Query: 165 SYYGYRDDEDGVLERVEGPAEREMRAKAVQEWRRLDEI-KKEAMKTVKSGEEASVMGQVN 223
YYG D+ + + + ER++ +++E+ E +K V E V +
Sbjct: 179 DYYGVYDEINDGNDDIIASNERDI-------INQVNEVLGDEIIKPVDDINEYYVAHKA- 230
Query: 224 EILKEGEEDVVLEERMREMEIERKEKERE------------FVVHVPLPDDKEIEKMVIE 271
+G ++++ E+ R ++ RK K + F VP D E+ K ++
Sbjct: 231 ----QGVDNLIEFEKNRGKKLFRKFKNNQHNDEADSNVITNFEKEVPTSD--EVTKWIVN 284
Query: 272 RKKMELL 278
+K+ EL+
Sbjct: 285 KKRAELI 291
>sp|Q6C9I7|ISY1_YARLI Pre-mRNA-splicing factor ISY1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=ISY1 PE=3 SV=1
Length = 220
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 23/184 (12%)
Query: 1 MARNEEKAQSMLNRYIALQAEEK---KKPKERRPYLASECRDLSEADKWRQQIMREIGRK 57
M+RN EK SML+R+ QA + RP S L +A+KWR Q+M+EI RK
Sbjct: 1 MSRNSEKQGSMLHRFQQQQANAAGLLDVGRTVRPTYISGVESLPQAEKWRSQVMKEISRK 60
Query: 58 VAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDV 117
V +IQ+ L + +LRDLNDEINKL+ E+ W+ +I LGGPNY
Sbjct: 61 VTKIQDPALSDFQLRDLNDEINKLMSERHRWDLQIRSLGGPNYASF-------------- 106
Query: 118 PNPSGRGPGYRYFGAAKKLPGVRELF--EKPPELRKRRTRYDIYKRIDASYYGYRDDE-D 174
G+ GY+Y+G A++LPGV E+ +K + +K Y K ++ Y+GY DD
Sbjct: 107 ---GGKKRGYQYYGRARELPGVSEMLQSQKKDDTKKSGDFYIPPKNLNMVYFGYADDNVT 163
Query: 175 GVLE 178
G++E
Sbjct: 164 GLME 167
>sp|O74370|ISY1_SCHPO Pre-mRNA-splicing factor cwf12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf12 PE=1 SV=1
Length = 217
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 90/148 (60%), Gaps = 10/148 (6%)
Query: 25 KPKERRPYLASECRDLSEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIRE 84
KP E+RP + + +K R ++++I RK++ IQ+ L E+++RDLND IN+L+RE
Sbjct: 11 KPTEKRPKDIKSIKSVPICEKHRASVVKDISRKISRIQSATLPEYQIRDLNDAINRLMRE 70
Query: 85 KGHWERRIFELGGPNYTKHFAKMTDLEG-NIVDVPNPSGRGPGYRYFGAAKKLPGVRELF 143
K WE +I +LGG NY + AK+ + EG I D+ + YRY+G A++LPGV+ELF
Sbjct: 71 KHEWEVQIRDLGGINYLYNKAKLFEDEGEQISDIDD-------YRYYGRARELPGVKELF 123
Query: 144 EKPPELRKRRTRYDIY--KRIDASYYGY 169
E R R +R+DA Y+GY
Sbjct: 124 EADMSFIPERQRKQEMQKRRLDAWYFGY 151
>sp|Q59R35|ISY1_CANAL Pre-mRNA-splicing factor ISY1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=ISY1 PE=3 SV=1
Length = 266
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 22/190 (11%)
Query: 1 MARNEEKAQSMLNRYIALQAEEK-KKPKERRPYLASECRDLSEADKWRQQIMREIGRKVA 59
M+RN+EKAQS LNR+ Q+ +RP LS+A+ WR+ I+ EI +++
Sbjct: 1 MSRNKEKAQSSLNRFYQSQSSAPINYHYHQRPKNIHSITQLSQAEGWRRSIIGEISKQLT 60
Query: 60 EIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFE-LGGPNYTKHFAKM-TDLEGNIVDV 117
EI + + + ++R+LND++N+L EK WE I + L G +Y +H DL + V
Sbjct: 61 EINDFEISDIKVRELNDQLNELFNEKRRWEYHIRDKLHGNDYIRHNGNTKNDLINTGIRV 120
Query: 118 PNPSGRGPGYRYFGAAKKLPGVRELFEKPPELR--------------KRRTRYDIYK--- 160
N S +G YRYFG AK LP V+ + E+ + R KRR + D YK
Sbjct: 121 -NNSDKGKYYRYFGRAKDLPEVKLMIEENKKNRKNHKRDDIDDSDQSKRRRKVDQYKSTD 179
Query: 161 -RIDASYYGY 169
ID +YYG+
Sbjct: 180 NSIDMNYYGF 189
>sp|Q6CJQ3|ISY1_KLULA Pre-mRNA-splicing factor ISY1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=ISY1 PE=3 SV=1
Length = 237
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 15/157 (9%)
Query: 1 MARNEEKAQSMLNRYIALQAEEKKKPKE----RRPYLASECRDLSEADKWRQQIMREIGR 56
M+RN KA S+L RY LQA E ++ +RP ++ L EA +WR ++++EIG+
Sbjct: 1 MSRNVNKANSVLVRYQELQAAETGGYQDFSRLKRPTRINKVTKLDEALRWRNELVKEIGQ 60
Query: 57 KVAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRI-FELGGPNYTKHFAKMTDLEGNIV 115
+V +I + L E ++ ++NDE+NKL +EKG W+ I +L GP+ K ++ G ++
Sbjct: 61 RVTQIHDPSLNESQITEINDELNKLFQEKGRWDFHIRNKLKGPDLKKR-KQLNTTGGTLI 119
Query: 116 DVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKR 152
D G RYFG A +LP V++L + E R++
Sbjct: 120 D---------GKRYFGRALELPEVQKLLRESKEQREK 147
>sp|Q753F1|ISY1_ASHGO Pre-mRNA-splicing factor ISY1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ISY1 PE=3
SV=1
Length = 240
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 14/142 (9%)
Query: 1 MARNEEKAQSMLNRYIALQAEEKKKPKE----RRPYLASECRDLSEADKWRQQIMREIGR 56
M+RN +KA S+L RY L AE K+ +RP +L EA +WR +++++IG
Sbjct: 1 MSRNVDKANSVLARYQELVAENTSGYKDYSRFKRPTAVHRISNLEEAQRWRAEVVKDIGN 60
Query: 57 KVAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRI-FELGGPNYTKHFAKMTDLEGNIV 115
KV +I + L E ++ D+N+E+N+L +EK WE I L GP+Y + + G ++
Sbjct: 61 KVTQIHDPSLNEMQIEDINNELNRLFQEKMRWESHIRRNLRGPDYRRMKQGLNTTGGTVI 120
Query: 116 DVPNPSGRGPGYRYFGAAKKLP 137
+ G RYFG A +LP
Sbjct: 121 N---------GTRYFGRALELP 133
>sp|P21374|ISY1_YEAST Pre-mRNA-splicing factor ISY1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ISY1 PE=1 SV=2
Length = 235
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 1 MARNEEKAQSMLNRYIALQAEE----KKKPKERRPYLASECRDLSEADKWRQQIMREIGR 56
M+RN +KA S+L R+ QAE K + +RP S+ + + EA++W++Q+ +EI +
Sbjct: 1 MSRNVDKANSVLVRFQEQQAESAGGYKDYSRYQRPRNVSKVKSIKEANEWKRQVSKEIKQ 60
Query: 57 KVAEIQNEGLGEHRLRDLNDEINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVD 116
K I + L E ++ +LNDE+N L +E W+ I TK LE + V
Sbjct: 61 KSTRIYDPSLNEMQIAELNDELNNLFKEWKRWQWHIDHTLMEKKTKR----KRLEDSHV- 115
Query: 117 VPNPSGRGPGYRYFGAAKKLPGVRELFEKP 146
+ N G RYFG A +LP V+E ++
Sbjct: 116 LMNSGKLINGKRYFGRALELPEVKEWLKQS 145
>sp|Q6FR30|ISY1_CANGA Pre-mRNA-splicing factor ISY1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ISY1 PE=3 SV=1
Length = 203
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 1 MARNEEKAQSMLNRYIALQAEEKKK-PKERRPYLASECRDLSEADKWRQQIMREIGRKVA 59
M+RN +K+Q++L Y +AE ++ + +RP + S RD +EA +W +Q +RE+G
Sbjct: 1 MSRNVDKSQTVLALYQEHKAESRRDYNRYKRPRVES-VRDPAEAREWYKQTLREVGECTN 59
Query: 60 EIQNEGLGEHRLRDLNDEINKLIREKGHWERRI 92
+ + L E ++R+ N +N+LI+E W R +
Sbjct: 60 RLYDPLLSEEQVRECNARVNQLIQESQRWSRHL 92
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 35.8 bits (81), Expect = 0.40, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 112 GNIVDVPNPSGRGPGYRYFGAAK-KLPGVR-ELFEKPPELRKRRTRYDIYKRIDASYYGY 169
GN+ VP P G G K + PG L L+K + I + +D G
Sbjct: 1380 GNVPCVPLPCGGALCTGRKGHRKCRGPGCHGSLTLSTNALQKAQEAKSIIRNLDKQVRGL 1439
Query: 170 RDDEDGVLERVEGPAEREMRAKAVQEWRRLDEIKKEAMKTVKSGEEASVMGQVNEILKEG 229
++ + + E+ E + A+Q +L I+ ++ S EE +N +K+
Sbjct: 1440 KNQIESISEQAE-----VSKNNALQLREKLGNIRNQS----DSEEE-----NINLFIKK- 1484
Query: 230 EEDVVLEERMREMEIERKEKEREFVVHVPLPDDKEIEKMVIERKKMELLKKYATEE--FV 287
++ +LEE + +IE K +H+P+P +++V +K M+L + Y T+E
Sbjct: 1485 VKNFLLEENVPPEDIE-KVANGVLDIHLPIPSQNLTDELVKIQKHMQLCEDYRTDENRLN 1543
Query: 288 EEQNEAKAML 297
EE + A+ +L
Sbjct: 1544 EEADGAQKLL 1553
>sp|Q6C370|END3_YARLI Actin cytoskeleton-regulatory complex protein END3 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=END3 PE=3 SV=1
Length = 400
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 195 EWRRLDEIKKEAMKTVKSGEEASVMGQVNEILKEGEEDV-VLEERMREMEIERKEKEREF 253
E +L + K+E ++ KSG ASV G+ N LKE EE+V +LE ++ E+E+ ++ K++E
Sbjct: 332 ELEQLLDYKEEQLRKAKSGAPASV-GETN--LKESEEEVNLLEMQVNELEVHQQRKQQEL 388
>sp|P30141|MRP4_STRPY Fibrinogen- and Ig-binding protein OS=Streptococcus pyogenes
GN=mrp4 PE=4 SV=1
Length = 388
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 37/181 (20%)
Query: 16 IALQAEEKKKPKERRPYLASECRDLSEADKWRQQIMREIGRKVAEIQNEG--LGEHRLRD 73
+ LQ +E K E R L + RDL + Q + E RK+A +++E + L
Sbjct: 52 VLLQGKEANKVFEERKALEKQARDLGDTINHMSQTISEQSRKIAALKSEAELKNQQALEA 111
Query: 74 LND---EINKLIREKGHWERRIFELGGPNYTKHFAKMTDLEGNIVDVPNPSGRGPGYRYF 130
LN+ +I+ L E + I EG + + N S R
Sbjct: 112 LNNKNKQISDLTNENAQLKEAI------------------EGYVQTIQNAS------REI 147
Query: 131 GAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYY---GYRDDEDGVLERVEGPAERE 187
A + +EL +L + + K+ DAS E LE + G A+RE
Sbjct: 148 AAKQ-----QELAAAKSQLEAKNAEIEALKQQDASKTEEIAKLQSEAATLENLLGSAKRE 202
Query: 188 M 188
+
Sbjct: 203 L 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,048,603
Number of Sequences: 539616
Number of extensions: 5578948
Number of successful extensions: 22828
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 550
Number of HSP's that attempted gapping in prelim test: 21101
Number of HSP's gapped (non-prelim): 1703
length of query: 301
length of database: 191,569,459
effective HSP length: 117
effective length of query: 184
effective length of database: 128,434,387
effective search space: 23631927208
effective search space used: 23631927208
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)