Query 022216
Match_columns 301
No_of_seqs 202 out of 1786
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 08:54:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022216.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022216hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 100.0 7E-36 1.5E-40 251.1 18.3 227 67-300 1-269 (329)
2 PRK15181 Vi polysaccharide bio 100.0 1.5E-33 3.2E-38 254.0 21.0 233 62-300 11-280 (348)
3 PLN00141 Tic62-NAD(P)-related 100.0 2.8E-32 6.1E-37 234.9 27.3 235 65-301 16-251 (251)
4 KOG1502 Flavonol reductase/cin 100.0 5.6E-32 1.2E-36 233.4 22.5 228 65-300 5-269 (327)
5 PF01073 3Beta_HSD: 3-beta hyd 100.0 2.8E-32 6E-37 237.6 18.8 226 70-300 1-266 (280)
6 PRK11908 NAD-dependent epimera 100.0 1.1E-31 2.4E-36 241.9 22.9 228 67-300 2-269 (347)
7 PLN02427 UDP-apiose/xylose syn 100.0 9.1E-32 2E-36 245.8 22.1 232 64-300 12-304 (386)
8 PLN02572 UDP-sulfoquinovose sy 100.0 4.9E-32 1.1E-36 250.5 19.4 232 63-300 44-355 (442)
9 PLN02214 cinnamoyl-CoA reducta 100.0 2E-31 4.3E-36 239.6 22.4 228 65-300 9-266 (342)
10 TIGR02622 CDP_4_6_dhtase CDP-g 100.0 4.9E-31 1.1E-35 237.8 19.9 233 64-300 2-274 (349)
11 PLN02662 cinnamyl-alcohol dehy 100.0 1.8E-30 4E-35 231.5 22.0 229 65-300 3-266 (322)
12 CHL00194 ycf39 Ycf39; Provisio 100.0 2.9E-30 6.3E-35 229.8 22.6 211 67-300 1-219 (317)
13 PLN02695 GDP-D-mannose-3',5'-e 100.0 2.4E-30 5.2E-35 234.7 22.2 226 65-300 20-279 (370)
14 PLN02986 cinnamyl-alcohol dehy 100.0 2.4E-30 5.1E-35 230.9 21.3 229 65-300 4-267 (322)
15 PRK08125 bifunctional UDP-gluc 100.0 2E-30 4.3E-35 251.3 22.0 230 64-300 313-583 (660)
16 PLN02989 cinnamyl-alcohol dehy 100.0 4.3E-30 9.2E-35 229.5 21.8 229 65-300 4-268 (325)
17 PLN02650 dihydroflavonol-4-red 100.0 7.6E-30 1.7E-34 230.3 22.9 229 65-300 4-269 (351)
18 PRK10217 dTDP-glucose 4,6-dehy 100.0 6.8E-30 1.5E-34 230.9 22.2 228 67-300 2-268 (355)
19 TIGR01472 gmd GDP-mannose 4,6- 100.0 3.8E-30 8.2E-35 231.5 20.4 227 67-300 1-267 (343)
20 PLN00198 anthocyanidin reducta 100.0 1.7E-29 3.7E-34 226.8 22.0 229 65-300 8-281 (338)
21 PLN02166 dTDP-glucose 4,6-dehy 100.0 6.6E-30 1.4E-34 235.4 19.2 224 64-300 118-372 (436)
22 PLN02583 cinnamoyl-CoA reducta 100.0 3.2E-29 7E-34 221.1 22.4 231 64-300 4-261 (297)
23 PLN02896 cinnamyl-alcohol dehy 100.0 4E-29 8.7E-34 225.7 21.9 229 65-300 9-289 (353)
24 PLN02653 GDP-mannose 4,6-dehyd 100.0 3.2E-29 6.9E-34 225.3 21.0 229 64-300 4-273 (340)
25 PLN02206 UDP-glucuronate decar 100.0 2E-29 4.4E-34 232.6 19.8 224 64-300 117-371 (442)
26 TIGR01214 rmlD dTDP-4-dehydror 100.0 2.6E-29 5.5E-34 220.6 18.8 209 68-300 1-226 (287)
27 PRK09987 dTDP-4-dehydrorhamnos 100.0 2.3E-29 5E-34 222.1 18.2 212 67-300 1-232 (299)
28 PLN02240 UDP-glucose 4-epimera 100.0 5.9E-29 1.3E-33 224.5 21.3 233 63-300 2-287 (352)
29 PRK10675 UDP-galactose-4-epime 100.0 4.6E-29 1E-33 223.9 20.4 230 67-300 1-278 (338)
30 PLN02686 cinnamoyl-CoA reducta 100.0 7.1E-29 1.5E-33 224.9 21.6 231 62-300 49-321 (367)
31 COG1088 RfbB dTDP-D-glucose 4, 100.0 8E-29 1.7E-33 207.7 19.4 227 67-300 1-260 (340)
32 PLN02657 3,8-divinyl protochlo 100.0 3.2E-28 6.9E-33 221.9 24.1 218 64-300 58-294 (390)
33 PLN03209 translocon at the inn 100.0 3.5E-28 7.7E-33 225.3 24.0 228 63-298 77-323 (576)
34 COG0451 WcaG Nucleoside-diphos 100.0 1.1E-28 2.5E-33 218.8 19.9 222 68-300 2-254 (314)
35 PRK10084 dTDP-glucose 4,6 dehy 100.0 1.9E-28 4.2E-33 221.2 21.6 229 67-300 1-275 (352)
36 PF01370 Epimerase: NAD depend 100.0 3E-29 6.4E-34 213.6 14.9 209 69-281 1-236 (236)
37 PLN02260 probable rhamnose bio 100.0 1.3E-28 2.8E-33 239.6 20.8 230 65-300 5-267 (668)
38 TIGR03589 PseB UDP-N-acetylglu 100.0 1.9E-28 4.1E-33 218.7 19.2 214 64-300 2-242 (324)
39 TIGR01181 dTDP_gluc_dehyt dTDP 100.0 2.7E-28 5.9E-33 216.6 20.2 226 68-300 1-258 (317)
40 PRK11150 rfaD ADP-L-glycero-D- 100.0 1.1E-28 2.3E-33 218.9 17.5 217 69-300 2-252 (308)
41 TIGR03466 HpnA hopanoid-associ 100.0 3.7E-28 8E-33 216.9 20.9 224 67-300 1-245 (328)
42 PLN02725 GDP-4-keto-6-deoxyman 100.0 6.7E-28 1.4E-32 213.4 18.4 209 70-300 1-247 (306)
43 PLN00016 RNA-binding protein; 100.0 3E-27 6.4E-32 215.4 21.6 213 65-300 51-289 (378)
44 KOG1371 UDP-glucose 4-epimeras 100.0 1.7E-27 3.6E-32 202.5 18.0 231 66-300 2-281 (343)
45 PRK07201 short chain dehydroge 100.0 2.2E-27 4.8E-32 231.0 20.8 229 67-300 1-265 (657)
46 PLN02996 fatty acyl-CoA reduct 100.0 1.8E-27 4E-32 222.3 18.6 235 64-300 9-355 (491)
47 TIGR01179 galE UDP-glucose-4-e 100.0 1E-26 2.2E-31 207.4 22.0 228 68-300 1-273 (328)
48 COG4221 Short-chain alcohol de 100.0 1.2E-27 2.5E-32 197.2 14.1 196 64-273 4-231 (246)
49 COG1091 RfbD dTDP-4-dehydrorha 100.0 7.7E-27 1.7E-31 198.7 18.2 208 67-300 1-224 (281)
50 PF04321 RmlD_sub_bind: RmlD s 100.0 3.1E-28 6.8E-33 213.2 10.0 210 67-300 1-229 (286)
51 TIGR02197 heptose_epim ADP-L-g 100.0 6.8E-27 1.5E-31 207.7 18.7 219 69-300 1-257 (314)
52 TIGR01746 Thioester-redct thio 99.9 1.8E-26 3.8E-31 208.8 20.5 229 68-300 1-277 (367)
53 KOG1429 dTDP-glucose 4-6-dehyd 99.9 3E-26 6.5E-31 190.7 18.4 225 63-300 24-279 (350)
54 PF13460 NAD_binding_10: NADH( 99.9 6.8E-26 1.5E-30 185.8 19.9 183 69-270 1-183 (183)
55 PRK05865 hypothetical protein; 99.9 1.1E-25 2.4E-30 218.6 21.3 192 67-300 1-200 (854)
56 PRK08263 short chain dehydroge 99.9 7.7E-26 1.7E-30 197.4 16.7 220 65-300 2-260 (275)
57 KOG1430 C-3 sterol dehydrogena 99.9 4.5E-25 9.8E-30 194.2 20.2 223 65-294 3-259 (361)
58 KOG0747 Putative NAD+-dependen 99.9 1.7E-25 3.7E-30 186.2 14.9 230 66-300 6-265 (331)
59 PRK06482 short chain dehydroge 99.9 1.7E-25 3.8E-30 195.2 15.8 217 66-299 2-259 (276)
60 COG1086 Predicted nucleoside-d 99.9 4.8E-25 1.1E-29 200.3 18.1 217 63-299 247-492 (588)
61 PLN02778 3,5-epimerase/4-reduc 99.9 3.9E-25 8.4E-30 194.9 16.9 206 66-300 9-235 (298)
62 TIGR01777 yfcH conserved hypot 99.9 1.8E-24 3.8E-29 190.1 19.3 217 69-300 1-239 (292)
63 PF02719 Polysacc_synt_2: Poly 99.9 8.1E-26 1.8E-30 193.6 10.2 212 69-300 1-245 (293)
64 PRK07806 short chain dehydroge 99.9 5.5E-24 1.2E-28 182.8 20.7 212 64-283 4-242 (248)
65 COG0300 DltE Short-chain dehyd 99.9 7.5E-25 1.6E-29 185.6 14.6 195 64-272 4-228 (265)
66 PRK05875 short chain dehydroge 99.9 1.8E-24 4E-29 188.7 17.2 221 63-299 4-267 (276)
67 PRK08339 short chain dehydroge 99.9 5.4E-25 1.2E-29 190.9 12.9 205 63-281 5-255 (263)
68 PRK13394 3-hydroxybutyrate deh 99.9 1.4E-24 3E-29 187.9 15.3 207 64-283 5-258 (262)
69 PRK06180 short chain dehydroge 99.9 3E-24 6.5E-29 187.6 17.1 196 65-273 3-240 (277)
70 PRK12481 2-deoxy-D-gluconate 3 99.9 2.5E-24 5.5E-29 185.4 16.4 194 63-269 5-231 (251)
71 PRK12429 3-hydroxybutyrate deh 99.9 2.9E-24 6.3E-29 185.3 15.9 207 64-283 2-254 (258)
72 PRK07067 sorbitol dehydrogenas 99.9 1.3E-24 2.8E-29 187.8 13.6 207 64-283 4-253 (257)
73 PRK05717 oxidoreductase; Valid 99.9 3.8E-24 8.3E-29 184.6 16.4 208 62-282 6-245 (255)
74 PRK07523 gluconate 5-dehydroge 99.9 1.2E-24 2.6E-29 187.8 13.2 208 63-283 7-250 (255)
75 PRK06128 oxidoreductase; Provi 99.9 4.5E-24 9.8E-29 188.6 16.7 208 63-283 52-296 (300)
76 KOG1200 Mitochondrial/plastidi 99.9 1.2E-24 2.5E-29 171.7 11.4 213 63-282 11-252 (256)
77 PRK08265 short chain dehydroge 99.9 3.7E-24 7.9E-29 185.4 15.4 206 64-282 4-242 (261)
78 PRK07063 short chain dehydroge 99.9 4.6E-24 1E-28 184.6 15.9 194 63-269 4-237 (260)
79 PRK05876 short chain dehydroge 99.9 1.2E-23 2.6E-28 183.5 18.5 195 64-271 4-240 (275)
80 PLN02253 xanthoxin dehydrogena 99.9 6.9E-24 1.5E-28 185.5 16.6 207 63-282 15-267 (280)
81 TIGR03649 ergot_EASG ergot alk 99.9 4.1E-23 8.8E-28 181.2 21.0 195 68-300 1-211 (285)
82 PRK07825 short chain dehydroge 99.9 6.7E-24 1.5E-28 184.9 15.8 191 63-272 2-217 (273)
83 PLN02503 fatty acyl-CoA reduct 99.9 1.1E-23 2.4E-28 198.8 18.3 235 64-300 117-470 (605)
84 PRK12825 fabG 3-ketoacyl-(acyl 99.9 2.2E-23 4.8E-28 178.5 18.8 207 64-283 4-245 (249)
85 TIGR01832 kduD 2-deoxy-D-gluco 99.9 1.4E-23 3.1E-28 180.2 17.1 206 63-281 2-242 (248)
86 PRK07985 oxidoreductase; Provi 99.9 8.4E-24 1.8E-28 186.3 15.7 206 63-282 46-289 (294)
87 PRK06914 short chain dehydroge 99.9 6.7E-24 1.4E-28 185.6 14.9 204 65-283 2-254 (280)
88 PRK06114 short chain dehydroge 99.9 1.7E-23 3.7E-28 180.5 17.2 209 62-282 4-249 (254)
89 PRK05867 short chain dehydroge 99.9 1.1E-23 2.5E-28 181.4 15.7 208 63-282 6-248 (253)
90 PRK07231 fabG 3-ketoacyl-(acyl 99.9 3.2E-23 6.9E-28 178.1 18.3 206 64-282 3-246 (251)
91 PRK06196 oxidoreductase; Provi 99.9 2.2E-23 4.9E-28 185.4 17.8 209 62-272 22-262 (315)
92 PF07993 NAD_binding_4: Male s 99.9 3.2E-24 7E-29 184.5 11.9 169 71-240 1-205 (249)
93 PRK06182 short chain dehydroge 99.9 4.1E-23 8.9E-28 180.0 18.8 201 65-282 2-247 (273)
94 TIGR03325 BphB_TodD cis-2,3-di 99.9 2.6E-23 5.6E-28 180.2 17.1 205 64-281 3-252 (262)
95 PRK06200 2,3-dihydroxy-2,3-dih 99.9 4.2E-23 9.1E-28 178.9 18.3 193 64-269 4-239 (263)
96 PRK07074 short chain dehydroge 99.9 3.6E-23 7.7E-28 178.7 17.8 218 66-300 2-254 (257)
97 PRK07774 short chain dehydroge 99.9 2.3E-23 5E-28 179.0 16.5 204 64-283 4-245 (250)
98 PRK09186 flagellin modificatio 99.9 8E-24 1.7E-28 182.5 13.6 216 64-282 2-252 (256)
99 PRK07775 short chain dehydroge 99.9 2.6E-23 5.6E-28 181.4 16.9 205 64-282 8-250 (274)
100 PRK06179 short chain dehydroge 99.9 3.5E-23 7.6E-28 180.1 17.6 196 65-279 3-238 (270)
101 PRK12746 short chain dehydroge 99.9 2.2E-23 4.7E-28 179.7 16.1 206 64-282 4-250 (254)
102 PRK12823 benD 1,6-dihydroxycyc 99.9 1.3E-23 2.8E-28 181.7 14.2 205 63-283 5-257 (260)
103 PRK07478 short chain dehydroge 99.9 2.2E-23 4.7E-28 179.8 15.5 207 63-281 3-246 (254)
104 TIGR01963 PHB_DH 3-hydroxybuty 99.9 2.1E-23 4.5E-28 179.7 15.4 204 66-283 1-251 (255)
105 PRK08628 short chain dehydroge 99.9 1.1E-23 2.5E-28 181.9 13.7 207 62-282 3-248 (258)
106 PRK12826 3-ketoacyl-(acyl-carr 99.9 4.1E-23 8.9E-28 177.4 17.0 208 64-283 4-246 (251)
107 PRK06523 short chain dehydroge 99.9 2.1E-23 4.5E-28 180.4 15.2 202 62-282 5-254 (260)
108 PRK06138 short chain dehydroge 99.9 1.2E-22 2.6E-27 174.8 19.8 206 64-282 3-247 (252)
109 PRK08063 enoyl-(acyl carrier p 99.9 7.2E-23 1.6E-27 176.0 18.3 207 64-283 2-245 (250)
110 PRK06398 aldose dehydrogenase; 99.9 3.7E-23 8E-28 178.9 16.5 199 63-282 3-242 (258)
111 PRK08589 short chain dehydroge 99.9 5.1E-23 1.1E-27 179.4 17.5 204 64-282 4-250 (272)
112 PRK06079 enoyl-(acyl carrier p 99.9 2.6E-23 5.6E-28 179.2 15.4 192 63-269 4-232 (252)
113 PRK08085 gluconate 5-dehydroge 99.9 1.9E-23 4.1E-28 180.1 14.1 195 62-269 5-233 (254)
114 PRK06841 short chain dehydroge 99.9 6.4E-23 1.4E-27 176.8 17.1 208 62-282 11-250 (255)
115 PRK06139 short chain dehydroge 99.9 7E-23 1.5E-27 182.8 17.5 196 63-272 4-230 (330)
116 TIGR03206 benzo_BadH 2-hydroxy 99.9 5.1E-23 1.1E-27 176.8 16.0 205 65-282 2-246 (250)
117 PRK06463 fabG 3-ketoacyl-(acyl 99.9 9.1E-23 2E-27 176.0 17.6 206 63-282 4-245 (255)
118 PRK07454 short chain dehydroge 99.9 1.1E-22 2.5E-27 173.9 18.0 193 65-272 5-225 (241)
119 PRK12828 short chain dehydroge 99.9 7.3E-23 1.6E-27 174.4 16.8 204 63-283 4-235 (239)
120 PRK06935 2-deoxy-D-gluconate 3 99.9 5.4E-23 1.2E-27 177.8 16.2 206 62-282 11-253 (258)
121 PRK07024 short chain dehydroge 99.9 4.3E-23 9.2E-28 178.3 15.5 188 66-272 2-217 (257)
122 KOG2865 NADH:ubiquinone oxidor 99.9 1.3E-22 2.7E-27 169.2 17.5 219 62-299 57-290 (391)
123 PRK07060 short chain dehydroge 99.9 4.5E-23 9.7E-28 176.7 15.5 206 62-282 5-240 (245)
124 PRK12747 short chain dehydroge 99.9 6E-23 1.3E-27 176.8 16.3 204 65-282 3-248 (252)
125 PRK10538 malonic semialdehyde 99.9 5.1E-23 1.1E-27 176.9 15.6 192 67-272 1-224 (248)
126 PRK06077 fabG 3-ketoacyl-(acyl 99.9 8.2E-23 1.8E-27 175.8 16.8 207 64-283 4-244 (252)
127 PRK08277 D-mannonate oxidoredu 99.9 1.3E-22 2.8E-27 177.3 17.9 206 63-282 7-270 (278)
128 PRK09135 pteridine reductase; 99.9 1.7E-22 3.7E-27 173.3 18.3 206 65-283 5-244 (249)
129 PRK05993 short chain dehydroge 99.9 1.4E-22 3.1E-27 177.0 17.8 191 66-272 4-243 (277)
130 PRK12936 3-ketoacyl-(acyl-carr 99.9 9.7E-23 2.1E-27 174.5 16.1 206 64-283 4-241 (245)
131 PRK07890 short chain dehydroge 99.9 5.1E-23 1.1E-27 177.7 14.4 205 64-282 3-253 (258)
132 PRK08219 short chain dehydroge 99.9 1.2E-22 2.7E-27 171.8 16.5 200 66-282 3-222 (227)
133 PRK08415 enoyl-(acyl carrier p 99.9 6.2E-23 1.4E-27 178.9 15.0 205 64-282 3-247 (274)
134 PRK05866 short chain dehydroge 99.9 2.7E-22 5.9E-27 176.6 19.0 193 62-271 36-258 (293)
135 PRK09134 short chain dehydroge 99.9 1.2E-22 2.7E-27 175.5 16.6 206 65-283 8-243 (258)
136 PRK06701 short chain dehydroge 99.9 1.8E-22 4E-27 177.4 17.7 208 62-282 42-284 (290)
137 PRK08220 2,3-dihydroxybenzoate 99.9 1.2E-22 2.5E-27 174.9 16.0 188 63-269 5-231 (252)
138 PRK12320 hypothetical protein; 99.9 2.3E-22 5E-27 191.9 19.3 194 67-300 1-201 (699)
139 PRK07856 short chain dehydroge 99.9 1.1E-22 2.4E-27 175.2 15.4 202 63-282 3-237 (252)
140 PRK12827 short chain dehydroge 99.9 2.5E-22 5.4E-27 172.3 17.5 206 64-282 4-246 (249)
141 PRK06113 7-alpha-hydroxysteroi 99.9 1.3E-22 2.8E-27 175.1 15.7 209 62-283 7-249 (255)
142 PRK12742 oxidoreductase; Provi 99.9 9.7E-23 2.1E-27 173.8 14.8 204 64-281 4-232 (237)
143 PRK08642 fabG 3-ketoacyl-(acyl 99.9 1.1E-22 2.3E-27 175.2 15.2 206 64-282 3-248 (253)
144 PRK07370 enoyl-(acyl carrier p 99.9 9.5E-23 2.1E-27 176.3 14.8 198 63-275 3-241 (258)
145 PRK05872 short chain dehydroge 99.9 1E-22 2.3E-27 179.5 15.3 196 63-271 6-235 (296)
146 PRK08993 2-deoxy-D-gluconate 3 99.9 1.3E-22 2.7E-27 175.0 15.5 206 62-280 6-246 (253)
147 PRK12829 short chain dehydroge 99.9 9.9E-23 2.1E-27 176.4 14.8 208 63-283 8-260 (264)
148 PRK07109 short chain dehydroge 99.9 1.1E-22 2.5E-27 182.1 15.6 196 63-271 5-231 (334)
149 PRK12935 acetoacetyl-CoA reduc 99.9 2.1E-22 4.6E-27 172.8 16.5 207 64-283 4-244 (247)
150 PRK07666 fabG 3-ketoacyl-(acyl 99.9 2E-22 4.4E-27 172.1 16.3 192 64-271 5-224 (239)
151 PRK06505 enoyl-(acyl carrier p 99.9 1.7E-22 3.6E-27 176.0 15.9 205 63-282 4-249 (271)
152 PRK07035 short chain dehydroge 99.9 1.1E-22 2.4E-27 175.1 14.6 208 62-282 4-248 (252)
153 PRK12745 3-ketoacyl-(acyl-carr 99.9 3E-22 6.6E-27 172.7 17.2 205 66-283 2-250 (256)
154 KOG1205 Predicted dehydrogenas 99.9 2.5E-22 5.4E-27 171.5 16.2 196 62-272 8-238 (282)
155 PRK08213 gluconate 5-dehydroge 99.9 2E-22 4.3E-27 174.3 15.8 211 63-282 9-254 (259)
156 PRK08643 acetoin reductase; Va 99.9 1.3E-22 2.9E-27 175.0 14.8 204 66-282 2-251 (256)
157 PRK07062 short chain dehydroge 99.9 1.4E-22 3E-27 175.8 14.9 205 63-282 5-259 (265)
158 PRK12939 short chain dehydroge 99.9 2.7E-22 5.8E-27 172.3 16.5 207 64-283 5-246 (250)
159 PRK06171 sorbitol-6-phosphate 99.9 1.7E-22 3.8E-27 175.3 15.3 201 62-282 5-258 (266)
160 PRK09242 tropinone reductase; 99.9 2.3E-22 4.9E-27 173.7 15.8 207 62-282 5-250 (257)
161 PRK06101 short chain dehydroge 99.9 3.4E-22 7.5E-27 170.9 16.7 187 66-272 1-207 (240)
162 PRK06124 gluconate 5-dehydroge 99.9 4E-22 8.6E-27 172.1 16.9 208 62-282 7-250 (256)
163 COG3320 Putative dehydrogenase 99.9 1.4E-22 3E-27 176.6 13.9 174 67-241 1-205 (382)
164 PRK06500 short chain dehydroge 99.9 2.2E-22 4.7E-27 172.8 15.0 192 64-270 4-230 (249)
165 PRK06172 short chain dehydroge 99.9 2.7E-22 5.9E-27 172.8 15.5 207 63-282 4-248 (253)
166 PRK07097 gluconate 5-dehydroge 99.9 3.2E-22 7E-27 173.6 16.1 208 62-282 6-255 (265)
167 PRK07533 enoyl-(acyl carrier p 99.9 2.2E-22 4.8E-27 174.0 14.9 194 62-269 6-237 (258)
168 PRK05653 fabG 3-ketoacyl-(acyl 99.9 4.3E-22 9.3E-27 170.3 16.4 207 64-283 3-243 (246)
169 PRK05854 short chain dehydroge 99.9 5.4E-22 1.2E-26 176.3 17.5 209 63-273 11-262 (313)
170 PRK06181 short chain dehydroge 99.9 1.2E-21 2.6E-26 169.7 19.3 193 66-271 1-226 (263)
171 PRK07814 short chain dehydroge 99.9 3.9E-22 8.5E-27 172.9 16.1 207 63-282 7-249 (263)
172 PRK06484 short chain dehydroge 99.9 2.5E-22 5.3E-27 190.5 16.1 207 63-282 266-505 (520)
173 PRK06194 hypothetical protein; 99.9 4.2E-22 9.1E-27 174.8 16.4 195 64-271 4-253 (287)
174 PRK08340 glucose-1-dehydrogena 99.9 2.4E-22 5.3E-27 173.8 14.6 207 67-287 1-253 (259)
175 PRK05557 fabG 3-ketoacyl-(acyl 99.9 1.1E-21 2.3E-26 168.1 18.0 207 63-282 2-243 (248)
176 PRK07791 short chain dehydroge 99.9 2.1E-22 4.6E-27 176.7 13.6 205 64-282 4-255 (286)
177 PRK12384 sorbitol-6-phosphate 99.9 5.8E-22 1.3E-26 171.3 16.1 204 66-283 2-255 (259)
178 PRK07577 short chain dehydroge 99.9 1.1E-21 2.5E-26 166.8 17.6 196 65-282 2-230 (234)
179 PRK08594 enoyl-(acyl carrier p 99.9 4E-22 8.7E-27 172.3 14.9 194 63-269 4-236 (257)
180 PRK08267 short chain dehydroge 99.9 4.1E-22 8.8E-27 172.4 14.8 193 66-271 1-222 (260)
181 PRK08690 enoyl-(acyl carrier p 99.9 6.3E-22 1.4E-26 171.5 15.9 205 64-283 4-248 (261)
182 PRK09291 short chain dehydroge 99.9 4.3E-22 9.4E-27 171.8 14.8 194 66-272 2-230 (257)
183 PRK08159 enoyl-(acyl carrier p 99.9 4.2E-22 9.1E-27 173.5 14.8 193 63-269 7-237 (272)
184 PRK06550 fabG 3-ketoacyl-(acyl 99.9 7.6E-22 1.7E-26 168.1 16.0 199 64-282 3-230 (235)
185 PRK08416 7-alpha-hydroxysteroi 99.9 2.8E-22 6E-27 173.5 13.2 207 63-282 5-255 (260)
186 PRK12937 short chain dehydroge 99.9 8.9E-22 1.9E-26 168.6 16.1 206 64-282 3-242 (245)
187 PRK06949 short chain dehydroge 99.9 1.3E-21 2.7E-26 169.0 17.1 207 62-281 5-254 (258)
188 PRK06483 dihydromonapterin red 99.9 7.7E-22 1.7E-26 168.2 15.5 202 66-282 2-231 (236)
189 PRK05650 short chain dehydroge 99.9 9.2E-22 2E-26 171.2 16.3 192 67-271 1-226 (270)
190 PRK07792 fabG 3-ketoacyl-(acyl 99.9 1.4E-21 3E-26 173.2 17.6 224 62-300 8-285 (306)
191 PRK12748 3-ketoacyl-(acyl-carr 99.9 1.2E-21 2.5E-26 169.2 16.7 207 63-282 2-252 (256)
192 PRK06603 enoyl-(acyl carrier p 99.9 3.9E-22 8.5E-27 172.6 13.6 193 63-269 5-235 (260)
193 PRK08264 short chain dehydroge 99.9 1.5E-21 3.3E-26 166.6 17.0 183 63-271 3-208 (238)
194 PLN02260 probable rhamnose bio 99.9 1E-21 2.2E-26 191.4 18.0 207 65-300 379-606 (668)
195 PRK07041 short chain dehydroge 99.9 5.2E-22 1.1E-26 168.5 14.0 201 70-283 1-226 (230)
196 PRK06057 short chain dehydroge 99.9 1.8E-21 3.8E-26 168.0 17.3 204 64-282 5-245 (255)
197 KOG1201 Hydroxysteroid 17-beta 99.9 8.4E-22 1.8E-26 166.9 14.8 194 62-272 34-257 (300)
198 PRK07023 short chain dehydroge 99.9 1E-21 2.2E-26 168.3 15.6 193 66-273 1-232 (243)
199 PRK06125 short chain dehydroge 99.9 7E-22 1.5E-26 170.9 14.6 206 63-282 4-251 (259)
200 PRK12938 acetyacetyl-CoA reduc 99.9 9E-22 1.9E-26 168.8 14.9 206 64-282 1-241 (246)
201 PRK08217 fabG 3-ketoacyl-(acyl 99.9 1.8E-21 3.8E-26 167.4 16.7 206 64-283 3-250 (253)
202 PRK07984 enoyl-(acyl carrier p 99.9 8.2E-22 1.8E-26 170.7 14.7 193 64-270 4-235 (262)
203 PRK07102 short chain dehydroge 99.9 9.3E-22 2E-26 168.5 14.9 187 66-271 1-213 (243)
204 PRK08278 short chain dehydroge 99.9 2E-21 4.4E-26 169.4 17.2 195 63-271 3-233 (273)
205 PRK07326 short chain dehydroge 99.9 4.3E-21 9.3E-26 163.6 18.8 201 64-282 4-231 (237)
206 PRK05884 short chain dehydroge 99.9 7E-22 1.5E-26 167.2 13.7 176 67-269 1-201 (223)
207 PF05368 NmrA: NmrA-like famil 99.9 2.5E-21 5.4E-26 164.9 16.8 206 69-300 1-223 (233)
208 PRK07904 short chain dehydroge 99.9 5.6E-21 1.2E-25 164.8 19.0 188 65-272 7-224 (253)
209 PRK08226 short chain dehydroge 99.9 1.3E-21 2.8E-26 169.5 15.1 207 64-282 4-251 (263)
210 PRK06997 enoyl-(acyl carrier p 99.9 1.2E-21 2.6E-26 169.6 14.5 193 64-270 4-235 (260)
211 PRK06197 short chain dehydroge 99.9 1.8E-21 3.9E-26 172.5 15.9 216 63-279 13-263 (306)
212 PRK08936 glucose-1-dehydrogena 99.9 2.2E-21 4.9E-26 167.9 16.1 195 63-270 4-234 (261)
213 PRK12743 oxidoreductase; Provi 99.9 1.7E-21 3.6E-26 168.3 15.0 204 66-282 2-241 (256)
214 PRK09072 short chain dehydroge 99.9 2.7E-21 5.8E-26 167.6 16.3 195 64-272 3-223 (263)
215 PRK05693 short chain dehydroge 99.9 2.8E-21 6E-26 168.5 16.4 191 66-272 1-234 (274)
216 PRK05565 fabG 3-ketoacyl-(acyl 99.9 3.6E-21 7.8E-26 164.9 16.8 206 64-283 3-244 (247)
217 PRK07677 short chain dehydroge 99.9 3.1E-21 6.7E-26 166.2 16.4 203 66-282 1-243 (252)
218 PRK08251 short chain dehydroge 99.9 4.6E-21 9.9E-26 164.6 17.3 187 66-271 2-218 (248)
219 PRK12744 short chain dehydroge 99.9 2.8E-21 6.1E-26 166.9 16.0 207 63-282 5-252 (257)
220 PRK07889 enoyl-(acyl carrier p 99.9 9.9E-22 2.1E-26 169.8 13.1 204 64-281 5-248 (256)
221 PRK07831 short chain dehydroge 99.9 1.7E-21 3.6E-26 168.8 14.5 194 63-269 14-244 (262)
222 PRK12824 acetoacetyl-CoA reduc 99.9 4.4E-21 9.5E-26 164.2 16.6 204 67-283 3-241 (245)
223 PRK07576 short chain dehydroge 99.9 3E-21 6.5E-26 167.5 15.7 208 63-283 6-249 (264)
224 TIGR03443 alpha_am_amid L-amin 99.9 6.1E-21 1.3E-25 199.8 21.0 231 66-300 971-1261(1389)
225 PRK12859 3-ketoacyl-(acyl-carr 99.9 2.6E-21 5.5E-26 167.2 15.0 205 64-281 4-252 (256)
226 KOG0725 Reductases with broad 99.9 4.2E-21 9.1E-26 165.9 16.3 202 62-277 4-251 (270)
227 PRK06123 short chain dehydroge 99.9 2.4E-21 5.1E-26 166.3 14.5 205 66-282 2-246 (248)
228 PRK06940 short chain dehydroge 99.9 3.4E-21 7.4E-26 168.1 15.7 212 66-281 2-260 (275)
229 PLN02780 ketoreductase/ oxidor 99.9 3.2E-21 7E-26 171.5 15.3 189 65-270 52-271 (320)
230 PRK08324 short chain dehydroge 99.9 4.1E-21 8.9E-26 187.0 17.2 208 63-283 419-674 (681)
231 PRK05855 short chain dehydroge 99.9 4E-21 8.6E-26 184.4 16.6 197 63-272 312-549 (582)
232 PRK08703 short chain dehydroge 99.9 6.7E-21 1.4E-25 162.8 16.1 198 63-278 3-234 (239)
233 PRK06924 short chain dehydroge 99.9 4.2E-21 9.1E-26 165.1 14.8 200 67-279 2-246 (251)
234 PRK07453 protochlorophyllide o 99.9 2.7E-21 5.9E-26 172.5 14.0 173 64-237 4-232 (322)
235 PRK09730 putative NAD(P)-bindi 99.9 4E-21 8.8E-26 164.6 14.4 204 67-282 2-245 (247)
236 PRK08017 oxidoreductase; Provi 99.9 9.4E-21 2E-25 163.4 16.1 191 67-273 3-225 (256)
237 PRK08303 short chain dehydroge 99.9 7.6E-21 1.7E-25 168.1 15.5 199 63-271 5-254 (305)
238 PRK08945 putative oxoacyl-(acy 99.9 8E-21 1.7E-25 163.1 15.2 190 63-269 9-230 (247)
239 PRK06198 short chain dehydroge 99.9 7.2E-21 1.6E-25 164.5 15.0 206 64-282 4-252 (260)
240 KOG4169 15-hydroxyprostaglandi 99.9 2.3E-21 4.9E-26 157.1 10.6 215 63-283 2-243 (261)
241 PRK06947 glucose-1-dehydrogena 99.9 6.2E-21 1.4E-25 163.8 13.8 204 66-281 2-245 (248)
242 PRK07201 short chain dehydroge 99.9 9.9E-21 2.1E-25 184.4 16.9 191 63-271 368-588 (657)
243 PRK07832 short chain dehydroge 99.9 1.2E-20 2.6E-25 164.4 15.6 192 67-271 1-232 (272)
244 PLN02730 enoyl-[acyl-carrier-p 99.9 1E-20 2.2E-25 166.3 15.1 207 62-281 5-283 (303)
245 PRK12367 short chain dehydroge 99.9 2E-20 4.3E-25 160.4 16.2 182 62-272 10-213 (245)
246 PRK07069 short chain dehydroge 99.9 1.6E-20 3.5E-25 161.4 15.7 190 68-270 1-232 (251)
247 PRK07578 short chain dehydroge 99.9 1.4E-20 3.1E-25 156.3 14.6 180 67-280 1-198 (199)
248 COG1090 Predicted nucleoside-d 99.9 3.5E-20 7.5E-25 154.8 16.7 214 69-300 1-237 (297)
249 TIGR02415 23BDH acetoin reduct 99.9 1.8E-20 4E-25 161.4 15.6 192 67-271 1-236 (254)
250 PRK05786 fabG 3-ketoacyl-(acyl 99.9 4.4E-20 9.5E-25 157.5 17.5 205 64-281 3-232 (238)
251 PRK06484 short chain dehydroge 99.8 1.1E-20 2.4E-25 179.3 14.5 193 65-270 4-231 (520)
252 TIGR01830 3oxo_ACP_reduc 3-oxo 99.8 3.6E-20 7.7E-25 157.9 15.9 201 69-282 1-236 (239)
253 TIGR01829 AcAcCoA_reduct aceto 99.8 3.1E-20 6.7E-25 158.7 15.4 204 67-283 1-239 (242)
254 TIGR02632 RhaD_aldol-ADH rhamn 99.8 2.8E-20 6.2E-25 180.3 16.7 208 63-283 411-669 (676)
255 TIGR01831 fabG_rel 3-oxoacyl-( 99.8 2.2E-20 4.7E-25 159.5 13.9 189 69-270 1-222 (239)
256 PRK06953 short chain dehydroge 99.8 6.9E-20 1.5E-24 154.8 16.7 181 66-271 1-204 (222)
257 PRK05599 hypothetical protein; 99.8 3.7E-20 8E-25 159.0 14.9 185 67-272 1-215 (246)
258 TIGR02685 pter_reduc_Leis pter 99.8 2.4E-20 5.3E-25 162.0 13.3 202 67-282 2-260 (267)
259 PRK07424 bifunctional sterol d 99.8 1.1E-19 2.4E-24 165.0 16.8 183 62-272 174-373 (406)
260 TIGR01500 sepiapter_red sepiap 99.8 2.4E-20 5.3E-25 161.0 11.8 189 68-269 2-242 (256)
261 PRK08177 short chain dehydroge 99.8 2.5E-19 5.4E-24 151.7 17.7 183 66-271 1-207 (225)
262 TIGR01289 LPOR light-dependent 99.8 5.4E-20 1.2E-24 163.5 14.2 205 66-271 3-268 (314)
263 KOG1203 Predicted dehydrogenas 99.8 1.4E-18 3.1E-23 154.8 22.4 232 62-299 75-319 (411)
264 PRK08261 fabG 3-ketoacyl-(acyl 99.8 5.8E-20 1.3E-24 171.3 14.0 204 63-282 207-444 (450)
265 KOG1431 GDP-L-fucose synthetas 99.8 1.3E-19 2.9E-24 146.4 13.9 215 66-300 1-255 (315)
266 KOG1207 Diacetyl reductase/L-x 99.8 3.7E-20 8E-25 143.8 10.2 196 63-271 4-227 (245)
267 PRK09009 C factor cell-cell si 99.8 3.2E-19 6.9E-24 151.9 16.7 194 67-280 1-228 (235)
268 KOG1208 Dehydrogenases with di 99.8 4.3E-19 9.2E-24 155.8 16.0 210 62-273 31-272 (314)
269 PRK08862 short chain dehydroge 99.8 5E-19 1.1E-23 150.0 13.7 180 63-269 2-214 (227)
270 PLN00015 protochlorophyllide r 99.8 7.2E-19 1.6E-23 155.9 13.4 201 70-271 1-264 (308)
271 KOG1611 Predicted short chain- 99.8 1.4E-18 3.1E-23 140.8 13.3 183 65-268 2-228 (249)
272 COG1089 Gmd GDP-D-mannose dehy 99.8 2.8E-17 6.2E-22 137.5 19.9 226 66-298 2-264 (345)
273 KOG1221 Acyl-CoA reductase [Li 99.8 1E-17 2.2E-22 151.7 17.6 235 64-300 10-329 (467)
274 KOG1209 1-Acyl dihydroxyaceton 99.8 1.6E-18 3.4E-23 139.1 10.7 160 66-240 7-192 (289)
275 PF13561 adh_short_C2: Enoyl-( 99.8 1.7E-19 3.7E-24 154.4 5.4 189 73-278 1-231 (241)
276 COG0702 Predicted nucleoside-d 99.8 4.8E-17 1E-21 141.5 19.8 207 67-300 1-216 (275)
277 PRK06300 enoyl-(acyl carrier p 99.8 3.1E-18 6.6E-23 150.5 12.0 209 62-282 4-283 (299)
278 COG3967 DltE Short-chain dehyd 99.8 5.4E-18 1.2E-22 135.4 11.6 166 64-236 3-188 (245)
279 PRK12428 3-alpha-hydroxysteroi 99.8 8.2E-18 1.8E-22 144.0 12.6 179 82-269 1-213 (241)
280 KOG2774 NAD dependent epimeras 99.8 3.7E-17 8.1E-22 133.1 15.1 227 65-301 43-298 (366)
281 KOG1610 Corticosteroid 11-beta 99.8 1.5E-17 3.3E-22 141.6 13.3 163 63-239 26-217 (322)
282 KOG1199 Short-chain alcohol de 99.8 1.7E-18 3.6E-23 134.5 6.7 206 64-282 7-254 (260)
283 COG2910 Putative NADH-flavin r 99.7 1.9E-16 4.1E-21 124.5 17.0 202 67-281 1-210 (211)
284 smart00822 PKS_KR This enzymat 99.7 5.2E-17 1.1E-21 131.4 13.6 156 67-235 1-180 (180)
285 COG1028 FabG Dehydrogenases wi 99.7 6.2E-17 1.3E-21 139.1 12.8 190 64-266 3-229 (251)
286 PF00106 adh_short: short chai 99.7 1.4E-17 3.1E-22 134.1 8.3 140 67-219 1-160 (167)
287 KOG1210 Predicted 3-ketosphing 99.7 2.1E-15 4.6E-20 128.4 14.5 193 67-272 34-261 (331)
288 KOG1014 17 beta-hydroxysteroid 99.6 3.6E-15 7.8E-20 127.2 13.2 164 66-241 49-241 (312)
289 TIGR02813 omega_3_PfaA polyket 99.6 5.9E-15 1.3E-19 157.8 13.6 162 65-239 1996-2226(2582)
290 KOG4039 Serine/threonine kinas 99.6 2.9E-14 6.3E-19 111.4 12.6 159 61-239 13-175 (238)
291 KOG4288 Predicted oxidoreducta 99.5 4.2E-14 9.1E-19 115.0 9.0 194 64-275 50-267 (283)
292 KOG1372 GDP-mannose 4,6 dehydr 99.5 1.8E-12 3.9E-17 106.7 16.3 223 66-297 28-292 (376)
293 PF08659 KR: KR domain; Inter 99.5 1.9E-13 4.2E-18 111.7 10.8 153 68-233 2-178 (181)
294 KOG1204 Predicted dehydrogenas 99.5 4.3E-14 9.4E-19 115.0 5.6 193 66-271 6-238 (253)
295 PRK06720 hypothetical protein; 99.4 1.4E-12 2.9E-17 105.2 10.9 122 62-185 12-160 (169)
296 COG0623 FabI Enoyl-[acyl-carri 99.4 7.1E-12 1.5E-16 102.3 11.5 209 63-287 3-250 (259)
297 KOG1478 3-keto sterol reductas 99.3 6.1E-12 1.3E-16 104.0 8.2 170 66-239 3-236 (341)
298 PRK08309 short chain dehydroge 99.3 1.1E-10 2.5E-15 94.6 13.7 156 67-274 1-168 (177)
299 PRK13656 trans-2-enoyl-CoA red 99.2 1E-09 2.2E-14 98.1 16.3 160 65-236 40-276 (398)
300 PTZ00325 malate dehydrogenase; 99.0 2.1E-09 4.6E-14 95.0 9.2 168 65-239 7-186 (321)
301 COG1748 LYS9 Saccharopine dehy 99.0 3.6E-09 7.9E-14 94.9 10.3 97 66-180 1-98 (389)
302 PLN00106 malate dehydrogenase 98.9 8.1E-09 1.8E-13 91.4 9.2 115 66-183 18-136 (323)
303 PRK09620 hypothetical protein; 98.8 1.4E-08 3E-13 85.7 8.3 185 64-270 1-221 (229)
304 PRK06732 phosphopantothenate-- 98.8 2.8E-07 6E-12 78.0 16.3 75 68-147 17-93 (229)
305 cd01336 MDH_cytoplasmic_cytoso 98.8 2.8E-08 6E-13 88.5 9.4 115 66-182 2-129 (325)
306 KOG3019 Predicted nucleoside-d 98.8 3.4E-08 7.3E-13 80.8 8.9 214 66-300 12-256 (315)
307 PRK05579 bifunctional phosphop 98.7 6.3E-07 1.4E-11 81.7 17.0 176 63-269 185-394 (399)
308 PF03435 Saccharop_dh: Sacchar 98.7 1.3E-07 2.9E-12 86.6 10.4 93 69-179 1-96 (386)
309 cd01078 NAD_bind_H4MPT_DH NADP 98.6 1.2E-07 2.6E-12 78.4 7.7 80 63-144 25-106 (194)
310 TIGR00521 coaBC_dfp phosphopan 98.6 2.4E-06 5.2E-11 77.7 16.6 175 63-268 182-389 (390)
311 PRK05086 malate dehydrogenase; 98.6 3.9E-07 8.4E-12 80.7 9.7 113 67-183 1-119 (312)
312 TIGR02114 coaB_strep phosphopa 98.5 3.7E-06 8E-11 71.1 13.5 68 68-146 16-91 (227)
313 TIGR00715 precor6x_red precorr 98.4 2.1E-06 4.6E-11 73.6 10.2 74 67-145 1-75 (256)
314 PRK12548 shikimate 5-dehydroge 98.4 9E-07 2E-11 77.7 7.8 79 63-144 123-208 (289)
315 KOG2733 Uncharacterized membra 98.3 1.4E-06 3.1E-11 76.0 7.0 77 68-146 7-94 (423)
316 PRK14982 acyl-ACP reductase; P 98.3 1.9E-06 4.1E-11 76.6 7.1 73 63-146 152-226 (340)
317 cd00704 MDH Malate dehydrogena 98.3 5.6E-06 1.2E-10 73.6 9.5 103 68-182 2-127 (323)
318 cd01338 MDH_choloroplast_like 98.3 1.8E-06 3.9E-11 76.8 6.2 163 66-239 2-187 (322)
319 TIGR01758 MDH_euk_cyt malate d 98.2 5.8E-06 1.3E-10 73.6 9.2 105 68-182 1-126 (324)
320 PF01488 Shikimate_DH: Shikima 98.2 2.9E-06 6.4E-11 65.8 4.8 76 63-146 9-86 (135)
321 COG0569 TrkA K+ transport syst 98.1 2.6E-05 5.6E-10 65.9 10.4 99 67-182 1-101 (225)
322 PF00056 Ldh_1_N: lactate/mala 98.1 1.2E-05 2.6E-10 62.8 6.8 107 67-182 1-119 (141)
323 KOG4022 Dihydropteridine reduc 98.1 0.0014 3.1E-08 51.3 17.9 196 66-283 3-226 (236)
324 PF04127 DFP: DNA / pantothena 98.1 1.7E-05 3.7E-10 64.6 7.7 99 65-170 2-128 (185)
325 PRK12475 thiamine/molybdopteri 98.0 8.8E-05 1.9E-09 66.5 11.6 108 62-187 20-154 (338)
326 PRK07688 thiamine/molybdopteri 97.9 0.00014 3E-09 65.2 11.8 108 62-187 20-154 (339)
327 PRK14106 murD UDP-N-acetylmura 97.9 4.6E-05 1E-09 71.3 8.8 76 64-147 3-80 (450)
328 PF00899 ThiF: ThiF family; I 97.9 0.00049 1.1E-08 53.2 12.3 104 66-187 2-130 (135)
329 cd05291 HicDH_like L-2-hydroxy 97.8 4.2E-05 9E-10 67.8 6.2 106 67-182 1-118 (306)
330 TIGR02356 adenyl_thiF thiazole 97.8 0.0003 6.6E-09 58.4 10.8 107 62-186 17-148 (202)
331 COG4982 3-oxoacyl-[acyl-carrie 97.8 0.00042 9E-09 65.0 12.2 222 63-297 393-671 (866)
332 PLN02819 lysine-ketoglutarate 97.8 0.00038 8.2E-09 70.5 12.7 77 65-145 568-658 (1042)
333 cd05294 LDH-like_MDH_nadp A la 97.8 9.1E-05 2E-09 65.7 7.5 111 67-183 1-123 (309)
334 PRK14874 aspartate-semialdehyd 97.7 0.00037 7.9E-09 62.5 10.9 93 66-183 1-96 (334)
335 TIGR01759 MalateDH-SF1 malate 97.7 0.00014 3.1E-09 64.7 8.1 115 66-182 3-130 (323)
336 PRK09496 trkA potassium transp 97.7 0.00029 6.4E-09 65.9 10.6 73 67-144 1-74 (453)
337 COG3268 Uncharacterized conser 97.7 6.9E-05 1.5E-09 65.1 5.8 76 67-146 7-82 (382)
338 PLN02968 Probable N-acetyl-gam 97.7 0.00019 4.1E-09 65.3 8.8 100 66-186 38-139 (381)
339 cd01337 MDH_glyoxysomal_mitoch 97.7 0.00015 3.2E-09 64.1 7.8 112 67-184 1-120 (310)
340 PRK00066 ldh L-lactate dehydro 97.7 0.00011 2.5E-09 65.2 7.0 108 65-182 5-123 (315)
341 PF02254 TrkA_N: TrkA-N domain 97.6 0.00099 2.1E-08 49.9 10.3 92 69-179 1-94 (116)
342 cd00757 ThiF_MoeB_HesA_family 97.6 0.001 2.2E-08 56.4 11.0 105 62-184 17-146 (228)
343 TIGR02355 moeB molybdopterin s 97.6 0.0014 3E-08 55.9 11.8 107 62-186 20-151 (240)
344 PRK05442 malate dehydrogenase; 97.6 0.0005 1.1E-08 61.3 9.2 113 66-182 4-131 (326)
345 cd01065 NAD_bind_Shikimate_DH 97.5 0.0002 4.2E-09 56.7 5.9 75 64-146 17-92 (155)
346 PRK00258 aroE shikimate 5-dehy 97.5 0.00021 4.6E-09 62.4 6.4 75 63-145 120-195 (278)
347 PRK08223 hypothetical protein; 97.5 0.0017 3.7E-08 56.4 11.8 107 62-184 23-154 (287)
348 TIGR01772 MDH_euk_gproteo mala 97.5 0.00061 1.3E-08 60.3 9.1 112 68-183 1-118 (312)
349 PRK09496 trkA potassium transp 97.5 0.0012 2.7E-08 61.7 11.7 104 64-183 229-332 (453)
350 PF01118 Semialdhyde_dh: Semia 97.5 0.003 6.4E-08 47.8 11.6 94 68-183 1-99 (121)
351 PRK05690 molybdopterin biosynt 97.5 0.0019 4.1E-08 55.3 11.7 104 62-183 28-156 (245)
352 PRK08328 hypothetical protein; 97.5 0.0022 4.7E-08 54.4 12.0 109 62-188 23-157 (231)
353 COG0039 Mdh Malate/lactate deh 97.5 0.00041 8.8E-09 60.9 7.6 112 67-182 1-118 (313)
354 PRK08762 molybdopterin biosynt 97.5 0.0014 3E-08 59.9 11.2 104 63-184 132-260 (376)
355 PRK08644 thiamine biosynthesis 97.5 0.002 4.3E-08 53.9 11.1 105 62-184 24-153 (212)
356 cd01485 E1-1_like Ubiquitin ac 97.4 0.0031 6.7E-08 52.2 12.1 110 63-188 16-152 (198)
357 PRK05597 molybdopterin biosynt 97.4 0.0018 4E-08 58.5 11.5 105 62-184 24-153 (355)
358 PRK04148 hypothetical protein; 97.4 0.00098 2.1E-08 51.1 8.2 94 65-180 16-109 (134)
359 TIGR02853 spore_dpaA dipicolin 97.4 0.00066 1.4E-08 59.5 8.0 72 62-144 147-218 (287)
360 KOG1202 Animal-type fatty acid 97.4 0.00035 7.5E-09 69.8 6.2 158 64-234 1766-1948(2376)
361 cd08295 double_bond_reductase_ 97.4 0.0017 3.7E-08 58.2 10.4 100 65-183 151-253 (338)
362 PRK00436 argC N-acetyl-gamma-g 97.3 0.0011 2.3E-08 59.8 8.8 100 66-185 2-103 (343)
363 TIGR02825 B4_12hDH leukotriene 97.3 0.0018 3.8E-08 57.8 10.3 100 65-184 138-240 (325)
364 COG0604 Qor NADPH:quinone redu 97.3 0.0016 3.4E-08 58.3 9.6 99 66-184 143-244 (326)
365 TIGR00507 aroE shikimate 5-deh 97.3 0.00047 1E-08 60.0 6.0 73 64-146 115-189 (270)
366 TIGR02354 thiF_fam2 thiamine b 97.3 0.0041 9E-08 51.5 11.3 76 63-142 18-117 (200)
367 PRK02472 murD UDP-N-acetylmura 97.3 0.0011 2.5E-08 61.9 9.0 78 64-148 3-81 (447)
368 PLN00112 malate dehydrogenase 97.3 0.00047 1E-08 63.6 5.8 108 66-182 100-227 (444)
369 cd01483 E1_enzyme_family Super 97.3 0.0069 1.5E-07 47.2 11.7 99 68-184 1-124 (143)
370 TIGR00518 alaDH alanine dehydr 97.3 0.0014 3E-08 59.7 8.6 76 65-146 166-241 (370)
371 TIGR01850 argC N-acetyl-gamma- 97.3 0.0016 3.5E-08 58.7 9.0 99 67-184 1-102 (346)
372 cd01075 NAD_bind_Leu_Phe_Val_D 97.3 0.00047 1E-08 57.1 5.1 71 62-144 24-94 (200)
373 PRK07878 molybdopterin biosynt 97.3 0.0032 6.9E-08 57.8 10.9 108 62-187 38-170 (392)
374 TIGR01809 Shik-DH-AROM shikima 97.2 0.00076 1.6E-08 59.0 6.5 77 64-145 123-200 (282)
375 cd05292 LDH_2 A subgroup of L- 97.2 0.0012 2.6E-08 58.5 7.8 105 67-181 1-116 (308)
376 COG1064 AdhP Zn-dependent alco 97.2 0.0031 6.8E-08 56.0 10.1 96 65-183 166-261 (339)
377 cd00650 LDH_MDH_like NAD-depen 97.2 0.00058 1.3E-08 59.2 5.5 112 69-182 1-120 (263)
378 PRK12549 shikimate 5-dehydroge 97.2 0.00055 1.2E-08 59.9 5.3 73 63-143 124-200 (284)
379 PRK05671 aspartate-semialdehyd 97.2 0.0028 6.1E-08 56.7 9.9 94 66-184 4-100 (336)
380 PRK15116 sulfur acceptor prote 97.2 0.0071 1.5E-07 52.3 11.9 104 63-183 27-155 (268)
381 cd08259 Zn_ADH5 Alcohol dehydr 97.2 0.0036 7.8E-08 55.6 10.6 98 65-184 162-259 (332)
382 cd01080 NAD_bind_m-THF_DH_Cycl 97.2 0.0016 3.4E-08 52.3 7.3 57 63-145 41-97 (168)
383 PRK05600 thiamine biosynthesis 97.2 0.0051 1.1E-07 55.9 11.5 104 62-183 37-165 (370)
384 TIGR01296 asd_B aspartate-semi 97.2 0.0032 6.9E-08 56.6 10.0 91 68-183 1-94 (339)
385 cd00755 YgdL_like Family of ac 97.2 0.013 2.7E-07 49.7 13.0 103 63-182 8-135 (231)
386 PRK13940 glutamyl-tRNA reducta 97.2 0.0011 2.3E-08 61.1 7.1 75 63-146 178-253 (414)
387 cd08266 Zn_ADH_like1 Alcohol d 97.2 0.0042 9.1E-08 55.2 10.8 100 65-184 166-268 (342)
388 PRK06129 3-hydroxyacyl-CoA deh 97.2 0.0012 2.5E-08 58.7 7.0 37 67-104 3-39 (308)
389 TIGR01470 cysG_Nterm siroheme 97.2 0.0074 1.6E-07 50.2 11.2 73 62-144 5-78 (205)
390 cd01489 Uba2_SUMO Ubiquitin ac 97.2 0.0068 1.5E-07 53.6 11.5 103 68-187 1-128 (312)
391 COG1179 Dinucleotide-utilizing 97.1 0.0093 2E-07 50.0 11.5 105 63-185 27-155 (263)
392 cd01492 Aos1_SUMO Ubiquitin ac 97.1 0.01 2.3E-07 49.0 11.9 108 62-188 17-149 (197)
393 cd05290 LDH_3 A subgroup of L- 97.1 0.0026 5.7E-08 56.2 8.8 105 68-182 1-120 (307)
394 PRK08306 dipicolinate synthase 97.1 0.0021 4.5E-08 56.7 8.1 71 63-144 149-219 (296)
395 PLN02520 bifunctional 3-dehydr 97.1 0.0009 2E-08 63.7 6.2 44 63-107 376-419 (529)
396 cd01484 E1-2_like Ubiquitin ac 97.1 0.0079 1.7E-07 51.0 11.3 102 68-186 1-128 (234)
397 PRK09424 pntA NAD(P) transhydr 97.1 0.0038 8.3E-08 58.8 10.1 104 65-182 164-286 (509)
398 TIGR01915 npdG NADPH-dependent 97.1 0.00067 1.5E-08 57.1 4.6 40 67-106 1-40 (219)
399 PTZ00117 malate dehydrogenase; 97.1 0.0018 3.9E-08 57.7 7.5 115 65-183 4-124 (319)
400 PF01113 DapB_N: Dihydrodipico 97.1 0.0063 1.4E-07 46.3 9.4 92 67-182 1-99 (124)
401 PRK07411 hypothetical protein; 97.1 0.0066 1.4E-07 55.7 11.1 106 62-185 34-164 (390)
402 PRK06223 malate dehydrogenase; 97.1 0.0022 4.7E-08 56.9 7.8 113 66-182 2-120 (307)
403 KOG1198 Zinc-binding oxidoredu 97.1 0.0026 5.7E-08 57.2 8.2 77 65-146 157-236 (347)
404 PRK14027 quinate/shikimate deh 97.1 0.0012 2.5E-08 57.8 5.7 76 64-144 125-203 (283)
405 cd08293 PTGR2 Prostaglandin re 97.0 0.0024 5.3E-08 57.3 7.8 98 67-183 156-256 (345)
406 PRK08655 prephenate dehydrogen 97.0 0.0064 1.4E-07 56.6 10.6 67 67-144 1-67 (437)
407 PRK14192 bifunctional 5,10-met 97.0 0.0027 5.8E-08 55.4 7.6 57 62-144 155-211 (283)
408 PF03721 UDPG_MGDP_dh_N: UDP-g 97.0 0.0011 2.3E-08 54.3 4.8 108 67-183 1-121 (185)
409 cd01487 E1_ThiF_like E1_ThiF_l 97.0 0.012 2.5E-07 47.7 10.7 98 68-183 1-123 (174)
410 KOG1494 NAD-dependent malate d 97.0 0.0041 8.9E-08 53.1 8.1 113 65-182 27-146 (345)
411 PLN03154 putative allyl alcoho 97.0 0.0026 5.7E-08 57.4 7.6 100 65-183 158-260 (348)
412 PLN02602 lactate dehydrogenase 97.0 0.0019 4.1E-08 58.1 6.5 107 67-182 38-155 (350)
413 cd05293 LDH_1 A subgroup of L- 97.0 0.0015 3.2E-08 58.0 5.8 108 66-182 3-121 (312)
414 PRK11064 wecC UDP-N-acetyl-D-m 97.0 0.004 8.6E-08 57.6 8.6 42 65-107 2-43 (415)
415 cd05295 MDH_like Malate dehydr 97.0 0.0007 1.5E-08 62.5 3.6 108 66-182 123-250 (452)
416 PTZ00082 L-lactate dehydrogena 96.9 0.0019 4.1E-08 57.5 6.2 110 65-183 5-130 (321)
417 PRK13982 bifunctional SbtC-lik 96.9 0.0039 8.4E-08 58.1 8.3 76 63-147 253-346 (475)
418 PRK08261 fabG 3-ketoacyl-(acyl 96.9 0.036 7.8E-07 51.8 15.0 31 71-101 43-73 (450)
419 PRK08664 aspartate-semialdehyd 96.9 0.0086 1.9E-07 54.1 10.0 37 66-102 3-40 (349)
420 PF03446 NAD_binding_2: NAD bi 96.9 0.0066 1.4E-07 48.5 8.3 65 66-143 1-65 (163)
421 PRK06718 precorrin-2 dehydroge 96.9 0.0057 1.2E-07 50.7 8.0 73 62-144 6-79 (202)
422 PRK12749 quinate/shikimate deh 96.9 0.0046 9.9E-08 54.2 7.8 79 63-144 121-205 (288)
423 cd08294 leukotriene_B4_DH_like 96.9 0.0044 9.5E-08 55.1 7.9 100 65-184 143-244 (329)
424 PRK14851 hypothetical protein; 96.8 0.012 2.6E-07 57.5 11.3 104 62-181 39-167 (679)
425 cd00300 LDH_like L-lactate deh 96.8 0.0041 8.8E-08 55.0 7.5 105 69-182 1-116 (300)
426 COG0169 AroE Shikimate 5-dehyd 96.8 0.0021 4.5E-08 55.9 5.4 105 64-175 124-244 (283)
427 KOG0023 Alcohol dehydrogenase, 96.8 0.007 1.5E-07 52.8 8.5 102 65-184 181-282 (360)
428 PF13241 NAD_binding_7: Putati 96.8 0.013 2.8E-07 43.0 8.9 91 62-183 3-93 (103)
429 PRK00045 hemA glutamyl-tRNA re 96.8 0.0036 7.7E-08 58.1 7.3 73 64-146 180-253 (423)
430 PRK03659 glutathione-regulated 96.8 0.0093 2E-07 57.9 10.3 90 66-174 400-490 (601)
431 PRK10669 putative cation:proto 96.8 0.0088 1.9E-07 57.6 10.0 72 67-143 418-489 (558)
432 PLN02383 aspartate semialdehyd 96.8 0.021 4.4E-07 51.4 11.7 94 66-184 7-103 (344)
433 cd08253 zeta_crystallin Zeta-c 96.8 0.005 1.1E-07 54.2 7.8 76 65-144 144-222 (325)
434 TIGR01763 MalateDH_bact malate 96.8 0.0059 1.3E-07 54.1 8.2 113 67-183 2-120 (305)
435 PLN00203 glutamyl-tRNA reducta 96.8 0.0036 7.9E-08 59.2 7.1 75 64-145 264-339 (519)
436 PF00670 AdoHcyase_NAD: S-aden 96.8 0.0034 7.4E-08 49.7 5.7 71 62-146 19-89 (162)
437 COG1004 Ugd Predicted UDP-gluc 96.8 0.0098 2.1E-07 53.5 9.0 110 67-182 1-120 (414)
438 cd05213 NAD_bind_Glutamyl_tRNA 96.8 0.0045 9.7E-08 55.0 7.0 73 64-146 176-249 (311)
439 PF02826 2-Hacid_dh_C: D-isome 96.7 0.0036 7.7E-08 50.9 5.8 70 62-145 32-101 (178)
440 PRK06719 precorrin-2 dehydroge 96.7 0.0085 1.8E-07 47.6 7.8 70 62-143 9-78 (157)
441 COG0373 HemA Glutamyl-tRNA red 96.7 0.0043 9.2E-08 56.6 6.7 74 63-146 175-249 (414)
442 cd05188 MDR Medium chain reduc 96.7 0.012 2.7E-07 50.3 9.5 99 65-184 134-235 (271)
443 COG2130 Putative NADP-dependen 96.7 0.015 3.3E-07 50.4 9.6 105 65-189 150-257 (340)
444 PRK00048 dihydrodipicolinate r 96.7 0.018 3.9E-07 49.7 10.3 66 67-144 2-69 (257)
445 cd05276 p53_inducible_oxidored 96.7 0.0054 1.2E-07 53.9 7.3 77 65-145 139-218 (323)
446 PRK14175 bifunctional 5,10-met 96.7 0.0075 1.6E-07 52.5 7.8 58 63-146 155-212 (286)
447 cd08289 MDR_yhfp_like Yhfp put 96.7 0.017 3.7E-07 51.2 10.5 98 66-183 147-245 (326)
448 TIGR01035 hemA glutamyl-tRNA r 96.7 0.0053 1.2E-07 56.8 7.3 74 63-146 177-251 (417)
449 PRK06849 hypothetical protein; 96.7 0.0058 1.3E-07 56.1 7.6 79 65-144 3-85 (389)
450 PLN02586 probable cinnamyl alc 96.7 0.023 5.1E-07 51.5 11.4 97 65-182 183-279 (360)
451 TIGR01757 Malate-DH_plant mala 96.7 0.0025 5.3E-08 58.0 4.9 108 66-182 44-171 (387)
452 PRK09310 aroDE bifunctional 3- 96.7 0.0023 4.9E-08 60.2 4.8 72 63-145 329-400 (477)
453 PRK14852 hypothetical protein; 96.7 0.02 4.3E-07 57.6 11.4 107 62-184 328-459 (989)
454 TIGR03451 mycoS_dep_FDH mycoth 96.7 0.018 4E-07 52.1 10.5 99 65-183 176-278 (358)
455 PRK09880 L-idonate 5-dehydroge 96.7 0.018 4E-07 51.7 10.5 96 65-182 169-267 (343)
456 cd08250 Mgc45594_like Mgc45594 96.6 0.02 4.3E-07 50.9 10.5 102 65-184 139-240 (329)
457 cd00401 AdoHcyase S-adenosyl-L 96.6 0.0088 1.9E-07 54.9 8.1 69 63-145 199-267 (413)
458 KOG2018 Predicted dinucleotide 96.6 0.024 5.2E-07 49.2 10.0 105 63-184 71-198 (430)
459 PRK03562 glutathione-regulated 96.6 0.017 3.7E-07 56.2 10.3 72 66-143 400-472 (621)
460 PRK05476 S-adenosyl-L-homocyst 96.6 0.0087 1.9E-07 55.1 7.7 68 63-144 209-276 (425)
461 cd05288 PGDH Prostaglandin deh 96.5 0.0091 2E-07 53.0 7.6 101 65-184 145-247 (329)
462 PLN02178 cinnamyl-alcohol dehy 96.5 0.033 7.2E-07 50.8 11.4 97 65-182 178-274 (375)
463 PRK04308 murD UDP-N-acetylmura 96.5 0.026 5.6E-07 52.8 10.8 76 64-148 3-80 (445)
464 cd08268 MDR2 Medium chain dehy 96.5 0.01 2.3E-07 52.3 7.8 101 65-183 144-245 (328)
465 TIGR03026 NDP-sugDHase nucleot 96.5 0.0083 1.8E-07 55.5 7.3 77 67-146 1-87 (411)
466 COG2085 Predicted dinucleotide 96.5 0.0067 1.5E-07 49.9 5.8 66 67-143 2-68 (211)
467 cd08281 liver_ADH_like1 Zinc-d 96.5 0.027 5.8E-07 51.3 10.3 99 65-183 191-292 (371)
468 TIGR03366 HpnZ_proposed putati 96.4 0.029 6.2E-07 48.9 10.0 99 65-183 120-220 (280)
469 PLN02353 probable UDP-glucose 96.4 0.021 4.5E-07 53.6 9.5 113 66-183 1-128 (473)
470 cd01491 Ube1_repeat1 Ubiquitin 96.4 0.051 1.1E-06 47.5 11.2 104 63-188 16-144 (286)
471 PRK07877 hypothetical protein; 96.4 0.03 6.6E-07 55.1 10.8 102 62-182 103-229 (722)
472 cd08239 THR_DH_like L-threonin 96.4 0.033 7.2E-07 49.8 10.4 99 65-183 163-264 (339)
473 PRK01438 murD UDP-N-acetylmura 96.4 0.077 1.7E-06 50.1 13.2 77 63-148 13-91 (480)
474 TIGR00561 pntA NAD(P) transhyd 96.4 0.024 5.3E-07 53.4 9.4 105 65-183 163-286 (511)
475 TIGR02824 quinone_pig3 putativ 96.3 0.013 2.9E-07 51.5 7.5 99 65-183 139-240 (325)
476 cd08292 ETR_like_2 2-enoyl thi 96.3 0.016 3.5E-07 51.3 7.8 99 65-183 139-240 (324)
477 PRK08057 cobalt-precorrin-6x r 96.3 0.086 1.9E-06 45.1 11.6 92 66-175 2-94 (248)
478 PF02882 THF_DHG_CYH_C: Tetrah 96.3 0.02 4.4E-07 45.5 7.2 59 62-146 32-90 (160)
479 cd05211 NAD_bind_Glu_Leu_Phe_V 96.3 0.011 2.4E-07 49.5 6.1 38 63-101 20-57 (217)
480 cd08244 MDR_enoyl_red Possible 96.3 0.019 4.1E-07 50.8 8.0 99 65-183 142-243 (324)
481 TIGR00978 asd_EA aspartate-sem 96.2 0.061 1.3E-06 48.4 11.1 34 67-100 1-35 (341)
482 PLN02494 adenosylhomocysteinas 96.2 0.018 4E-07 53.4 7.7 69 63-145 251-319 (477)
483 cd01339 LDH-like_MDH L-lactate 96.2 0.0096 2.1E-07 52.6 5.8 105 69-182 1-116 (300)
484 PF02571 CbiJ: Precorrin-6x re 96.2 0.078 1.7E-06 45.4 11.0 73 67-143 1-74 (249)
485 cd05212 NAD_bind_m-THF_DH_Cycl 96.2 0.021 4.6E-07 44.3 6.9 59 62-146 24-82 (140)
486 PRK07066 3-hydroxybutyryl-CoA 96.2 0.026 5.7E-07 50.2 8.4 75 66-143 7-91 (321)
487 cd01490 Ube1_repeat2 Ubiquitin 96.2 0.069 1.5E-06 49.4 11.3 102 68-185 1-134 (435)
488 TIGR03201 dearomat_had 6-hydro 96.2 0.046 1E-06 49.3 10.2 99 65-183 166-274 (349)
489 cd01079 NAD_bind_m-THF_DH NAD 96.2 0.032 6.8E-07 45.6 8.0 80 62-146 58-137 (197)
490 TIGR02818 adh_III_F_hyde S-(hy 96.2 0.045 9.8E-07 49.8 10.2 100 65-183 185-289 (368)
491 TIGR01771 L-LDH-NAD L-lactate 96.2 0.0071 1.5E-07 53.4 4.7 103 71-183 1-115 (299)
492 PRK11199 tyrA bifunctional cho 96.2 0.014 3.1E-07 53.2 6.8 35 65-99 97-131 (374)
493 PTZ00075 Adenosylhomocysteinas 96.2 0.023 5.1E-07 52.8 8.1 69 62-144 250-318 (476)
494 PRK15057 UDP-glucose 6-dehydro 96.2 0.034 7.3E-07 51.0 9.1 111 67-184 1-120 (388)
495 KOG1196 Predicted NAD-dependen 96.1 0.088 1.9E-06 45.7 10.8 110 65-190 153-262 (343)
496 cd08243 quinone_oxidoreductase 96.1 0.023 5E-07 50.0 7.8 99 65-183 142-240 (320)
497 PRK09288 purT phosphoribosylgl 96.1 0.028 6E-07 51.6 8.5 71 65-142 11-82 (395)
498 PRK10309 galactitol-1-phosphat 96.1 0.067 1.4E-06 48.1 10.8 100 65-183 160-262 (347)
499 PRK06019 phosphoribosylaminoim 96.1 0.025 5.4E-07 51.6 8.1 68 66-141 2-69 (372)
500 PRK06153 hypothetical protein; 96.1 0.065 1.4E-06 48.5 10.2 101 63-182 173-299 (393)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=7e-36 Score=251.11 Aligned_cols=227 Identities=23% Similarity=0.259 Sum_probs=183.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag~ 145 (301)
|+||||||+|+||+|++.+|+++|++|++++.-...-.+... .....++++|+.| .+.+.+.|.+ ++|.|||+||.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~--~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL--KLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh--hccCceEEecccc-HHHHHHHHHhcCCCEEEECccc
Confidence 689999999999999999999999999999876554444332 1117999999999 8999999987 89999999996
Q ss_pred CC----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHH-
Q 022216 146 QP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK- 220 (301)
Q Consensus 146 ~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~- 220 (301)
.. -+++..+|+.|+.||.+|+++|++.++++|||.||+++||.....|..++. +..|.+.||+||++.|++++.
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~-~~~p~NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETS-PLAPINPYGRSKLMSEEILRDA 156 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCC-CCCCCCcchhHHHHHHHHHHHH
Confidence 53 257888999999999999999999999999999999999988877766654 445889999999999998864
Q ss_pred ---cCCcEEEEecCcccCCCCCCce-------------------------eec------cccccccCCCCHHHHHHHHHH
Q 022216 221 ---SGINYTIIRPGGLRNEPPTGNI-------------------------IME------TEDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 221 ---~~i~~~~irpg~v~~~~~~~~~-------------------------~~~------~~~~~~~~~v~~~Dva~~~~~ 266 (301)
.+++++++|.+++.|....+.+ .+- .+..-.+++||+.|+|++++.
T Consensus 157 ~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~ 236 (329)
T COG1087 157 AKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVL 236 (329)
T ss_pred HHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHH
Confidence 6899999999999987433321 111 112233468999999999998
Q ss_pred HhcCCCC--CCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 267 ALLHPES--SYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 267 ~l~~~~~--~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+|+.-.. ...+||++++ ...|..|+++.+++
T Consensus 237 Al~~L~~~g~~~~~NLG~G---~G~SV~evi~a~~~ 269 (329)
T COG1087 237 ALKYLKEGGSNNIFNLGSG---NGFSVLEVIEAAKK 269 (329)
T ss_pred HHHHHHhCCceeEEEccCC---CceeHHHHHHHHHH
Confidence 8753221 2258999996 99999999998875
No 2
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=100.00 E-value=1.5e-33 Score=254.02 Aligned_cols=233 Identities=15% Similarity=0.124 Sum_probs=180.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh----cccc----CCCCeEEEEccCCCChHhHHHHhc
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSK----DNPSLQIVKADVTEGSAKLSEAIG 133 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~----~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~ 133 (301)
..+++|+||||||+||||++++++|+++|++|++++|....... .... ...++.++.+|++| .+.+.+++.
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~l~~~~~ 89 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK-FTDCQKACK 89 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC-HHHHHHHhh
Confidence 45678999999999999999999999999999999986543211 1100 11368899999999 888999999
Q ss_pred CCCCEEEEccCCCC----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHH
Q 022216 134 DDSEAVVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (301)
Q Consensus 134 ~~~d~Vi~~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~ 209 (301)
+ +|+|||+|+... ..++...+++|+.|+.+++++|++.++++|||+||..+||.....+..++ .+..|.+.|+.
T Consensus 90 ~-~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-~~~~p~~~Y~~ 167 (348)
T PRK15181 90 N-VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-RIGRPLSPYAV 167 (348)
T ss_pred C-CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-CCCCCCChhhH
Confidence 8 999999998543 13455678999999999999999999999999999999986544333332 23356678999
Q ss_pred HHHHHHHHHH----HcCCcEEEEecCcccCCCCCCc-------------------eeeccccccccCCCCHHHHHHHHHH
Q 022216 210 AKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN-------------------IIMETEDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 210 sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~-------------------~~~~~~~~~~~~~v~~~Dva~~~~~ 266 (301)
+|.++|++++ +++++++++||++++||..... +...+......+++|++|+|++++.
T Consensus 168 sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~ 247 (348)
T PRK15181 168 TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLL 247 (348)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHH
Confidence 9999998764 4689999999999999854211 0111222333468999999999987
Q ss_pred HhcCCC--CCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 267 ALLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 267 ~l~~~~--~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++..+. ..+++||++++ +.++++|+++.+.+
T Consensus 248 ~~~~~~~~~~~~~yni~~g---~~~s~~e~~~~i~~ 280 (348)
T PRK15181 248 SATTNDLASKNKVYNVAVG---DRTSLNELYYLIRD 280 (348)
T ss_pred HHhcccccCCCCEEEecCC---CcEeHHHHHHHHHH
Confidence 775432 35689999986 89999999999864
No 3
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=234.91 Aligned_cols=235 Identities=83% Similarity=1.256 Sum_probs=192.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHh-cCCCCEEEEcc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI-GDDSEAVVCAT 143 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~~~d~Vi~~A 143 (301)
.+|+||||||+|+||++++++|+++|++|+++.|++++...... ...++.++.+|++|..+.+.+.+ .+ +|+||+++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~-~d~vi~~~ 93 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-QDPSLQIVRADVTEGSDKLVEAIGDD-SDAVICAT 93 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-cCCceEEEEeeCCCCHHHHHHHhhcC-CCEEEECC
Confidence 57899999999999999999999999999999999877654433 23478999999998336777777 57 99999999
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcCC
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGI 223 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i 223 (301)
|.....+....+++|..++.++++++++.++++||++||.++|+...+.+..+.|...+++..|...|..+|+++++.++
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi 173 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGI 173 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 87543344456789999999999999999989999999999998654444444455556666777889999999988999
Q ss_pred cEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhcC
Q 022216 224 NYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR 301 (301)
Q Consensus 224 ~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~~ 301 (301)
++++||||+++++...+.+........+.++++++|+|++++.++.++...+.++++.+.+++...+++|+...++++
T Consensus 174 ~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (251)
T PLN00141 174 NYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQK 251 (251)
T ss_pred cEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhcC
Confidence 999999999998765555544333334456899999999999999888777889999998777889999999999874
No 4
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=100.00 E-value=5.6e-32 Score=233.38 Aligned_cols=228 Identities=23% Similarity=0.274 Sum_probs=177.1
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh-----ccccCCCCeEEEEccCCCChHhHHHHhcCCCCEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 139 (301)
.+++|+||||+||||+++++.|+++||+|+++.|+++..+. .+.....+...+.+||+| .+++.+++.+ +|+|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d-~~sf~~ai~g-cdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLD-EGSFDKAIDG-CDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccc-cchHHHHHhC-CCEE
Confidence 47899999999999999999999999999999999987332 112245569999999999 8999999999 9999
Q ss_pred EEccCCCCCCC--CC-CceeeehHHHHHHHHHHHHcC-CCEEEEeccccccccc---CC--C------CCCcchhhcchh
Q 022216 140 VCATGFQPGWD--LF-APWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAA---MG--Q------ILNPAYIFLNVF 204 (301)
Q Consensus 140 i~~Ag~~~~~~--~~-~~~~~N~~g~~~l~~a~~~~~-~~~iV~~SS~~~~~~~---~~--~------~~~~~~~~~~~~ 204 (301)
||+|.+..... ++ +.++.++.|+.|++++|++.. ++|||++||+++-... .+ . +.+.+++..+ -
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~-~ 161 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCK-K 161 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhh-H
Confidence 99998654322 23 688999999999999999987 9999999999865332 11 1 1122222222 2
Q ss_pred hHHHHHHHHHHHHH----HHcCCcEEEEecCcccCCCCCCcee-------------eccccccccCCCCHHHHHHHHHHH
Q 022216 205 GLTLIAKLQAEQYI----RKSGINYTIIRPGGLRNEPPTGNII-------------METEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 205 ~~y~~sK~~~e~~~----~~~~i~~~~irpg~v~~~~~~~~~~-------------~~~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
.+|..+|..+|+.+ .+.+++.+.|.|+.|.||.....+. .....+.+..++|++|+|++++.+
T Consensus 162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a 241 (327)
T KOG1502|consen 162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLA 241 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHH
Confidence 68999999999654 4578999999999999997655211 112233344589999999999999
Q ss_pred hcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 268 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 268 l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++.+.+. +.|.+.+ +...+.|+++.+.+
T Consensus 242 ~E~~~a~-GRyic~~----~~~~~~ei~~~l~~ 269 (327)
T KOG1502|consen 242 LEKPSAK-GRYICVG----EVVSIKEIADILRE 269 (327)
T ss_pred HcCcccC-ceEEEec----CcccHHHHHHHHHH
Confidence 9999865 5677776 56669999998865
No 5
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=100.00 E-value=2.8e-32 Score=237.62 Aligned_cols=226 Identities=22% Similarity=0.244 Sum_probs=170.4
Q ss_pred EEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCCC
Q 022216 70 FVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQP 147 (301)
Q Consensus 70 lVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~ 147 (301)
|||||+||||++++++|+++| ++|+++++.+..............+++++|++| .+++.+++++ +|+|||+|+...
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~l~~a~~g-~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITD-PESLEEALEG-VDVVFHTAAPVP 78 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEecccc-HHHHHHHhcC-CceEEEeCcccc
Confidence 699999999999999999999 799999887654331111122333499999999 8999999999 999999998654
Q ss_pred CC---CCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccC-CCCC---Ccchh-hcchhhHHHHHHHHHHHHHH
Q 022216 148 GW---DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAM-GQIL---NPAYI-FLNVFGLTLIAKLQAEQYIR 219 (301)
Q Consensus 148 ~~---~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~-~~~~---~~~~~-~~~~~~~y~~sK~~~e~~~~ 219 (301)
.. ..+.++++|+.||.+++++|++.+++|+||+||.++++... +.+. ++..+ +..+...|..||..+|+++.
T Consensus 79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~ 158 (280)
T PF01073_consen 79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL 158 (280)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence 32 35568899999999999999999999999999999987621 2111 12211 22356789999999999875
Q ss_pred Hc---------CCcEEEEecCcccCCCCCCc-------------eeeccccccccCCCCHHHHHHHHHHHhc---C----
Q 022216 220 KS---------GINYTIIRPGGLRNEPPTGN-------------IIMETEDTLYEGTISRDQVAEVAVEALL---H---- 270 (301)
Q Consensus 220 ~~---------~i~~~~irpg~v~~~~~~~~-------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~---~---- 270 (301)
+. .+++++|||..|+||..... ....+......++++++|+|++++.++. +
T Consensus 159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~ 238 (280)
T PF01073_consen 159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKP 238 (280)
T ss_pred hhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccccc
Confidence 41 28899999999999964221 1112223334568999999999987653 2
Q ss_pred CCCCCcEEEeecCCCCCCcC-HHHHHHHhhc
Q 022216 271 PESSYKVVEIISRVDAPKRS-YEDLFGSIKQ 300 (301)
Q Consensus 271 ~~~~~~~~~v~~~~~~~~~s-~~e~~~~i~~ 300 (301)
....|+.|++.++ +++. +.|+...+.+
T Consensus 239 ~~~~G~~y~itd~---~p~~~~~~f~~~~~~ 266 (280)
T PF01073_consen 239 ERVAGQAYFITDG---EPVPSFWDFMRPLWE 266 (280)
T ss_pred ccCCCcEEEEECC---CccCcHHHHHHHHHH
Confidence 3468999999996 8888 8888866643
No 6
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=100.00 E-value=1.1e-31 Score=241.87 Aligned_cols=228 Identities=14% Similarity=0.204 Sum_probs=175.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF 145 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~ 145 (301)
|+||||||+||||++++++|+++ |++|++++|+......+. ...+++++.+|++++.+.+.+++++ +|+|||+|+.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-~d~ViH~aa~ 78 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV--NHPRMHFFEGDITINKEWIEYHVKK-CDVILPLVAI 78 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc--cCCCeEEEeCCCCCCHHHHHHHHcC-CCEEEECccc
Confidence 68999999999999999999987 699999998765443333 2246899999998426778888888 9999999985
Q ss_pred CC----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhh------cchhhHHHHHHHHHH
Q 022216 146 QP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF------LNVFGLTLIAKLQAE 215 (301)
Q Consensus 146 ~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~------~~~~~~y~~sK~~~e 215 (301)
.. ..++...+++|+.++.+++++|++.+ +++||+||..+||...+.+..++..+ .++.+.|+.+|.++|
T Consensus 79 ~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e 157 (347)
T PRK11908 79 ATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMD 157 (347)
T ss_pred CChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHH
Confidence 43 24566778999999999999999887 79999999999986544333333221 245568999999999
Q ss_pred HHHH----HcCCcEEEEecCcccCCCCCC---------c--------------eeeccccccccCCCCHHHHHHHHHHHh
Q 022216 216 QYIR----KSGINYTIIRPGGLRNEPPTG---------N--------------IIMETEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 216 ~~~~----~~~i~~~~irpg~v~~~~~~~---------~--------------~~~~~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
++++ +++++++++||+.++||.... . +...........++|++|++++++.++
T Consensus 158 ~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~ 237 (347)
T PRK11908 158 RVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKII 237 (347)
T ss_pred HHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHH
Confidence 8775 468999999999999986321 0 011111223346999999999999988
Q ss_pred cCCC--CCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 269 LHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
..+. ..+++||++++ ...+|++|+++.|.+
T Consensus 238 ~~~~~~~~g~~yni~~~--~~~~s~~e~~~~i~~ 269 (347)
T PRK11908 238 ENKDGVASGKIYNIGNP--KNNHSVRELANKMLE 269 (347)
T ss_pred hCccccCCCCeEEeCCC--CCCcCHHHHHHHHHH
Confidence 8753 45789999873 247999999999864
No 7
>PLN02427 UDP-apiose/xylose synthase
Probab=100.00 E-value=9.1e-32 Score=245.77 Aligned_cols=232 Identities=16% Similarity=0.161 Sum_probs=173.7
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEeCCchhhhcccc----CCCCeEEEEccCCCChHhHHHHhcCCCCE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGDDSEA 138 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 138 (301)
.+.|+||||||+||||++++++|+++ |++|++++|+.++...+... ...+++++.+|++| .+.+.+++.+ +|+
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~-~d~ 89 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLEGLIKM-ADL 89 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHHHHhhc-CCE
Confidence 35689999999999999999999998 59999999876654433211 12479999999999 7899999999 999
Q ss_pred EEEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcch---------------h
Q 022216 139 VVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY---------------I 199 (301)
Q Consensus 139 Vi~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~---------------~ 199 (301)
|||+|+.... .+....+..|+.++.+++++|++.+ ++||++||..+||...+.+..++. .
T Consensus 90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence 9999986432 2233456789999999999999887 799999999999864322111110 0
Q ss_pred h------cchhhHHHHHHHHHHHHHHH----cCCcEEEEecCcccCCCCCC---------c-----------------ee
Q 022216 200 F------LNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTG---------N-----------------II 243 (301)
Q Consensus 200 ~------~~~~~~y~~sK~~~e~~~~~----~~i~~~~irpg~v~~~~~~~---------~-----------------~~ 243 (301)
+ .++.+.|+.+|.++|+++.. ++++++++||++++||.... . +.
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK 248 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence 0 12335799999999988753 68999999999999986320 0 00
Q ss_pred eccccccccCCCCHHHHHHHHHHHhcCCC-CCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 244 METEDTLYEGTISRDQVAEVAVEALLHPE-SSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 244 ~~~~~~~~~~~v~~~Dva~~~~~~l~~~~-~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
..+.......++|++|+|++++.++..+. ..+++||++++ .+.++++|+++.+.+
T Consensus 249 ~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~--~~~~s~~el~~~i~~ 304 (386)
T PLN02427 249 LVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNP--NNEVTVRQLAEMMTE 304 (386)
T ss_pred EECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCC--CCCccHHHHHHHHHH
Confidence 11111222368999999999998888764 35679999973 148999999998864
No 8
>PLN02572 UDP-sulfoquinovose synthase
Probab=100.00 E-value=4.9e-32 Score=250.47 Aligned_cols=232 Identities=16% Similarity=0.153 Sum_probs=170.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchh-------h----------h---ccccCCCCeEEEEccCC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-------K----------T---TLSKDNPSLQIVKADVT 122 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~-------~----------~---~~~~~~~~~~~~~~Dl~ 122 (301)
.+++|+||||||+||||++++++|+++|++|++++|..... . . .......+++++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 45789999999999999999999999999999987532110 0 0 00001246889999999
Q ss_pred CChHhHHHHhcC-CCCEEEEccCCCCC----C---CCCCceeeehHHHHHHHHHHHHcCCC-EEEEecccccccccCCCC
Q 022216 123 EGSAKLSEAIGD-DSEAVVCATGFQPG----W---DLFAPWKVDNFGTVNLVEACRKRGVN-RFILISSILVNGAAMGQI 193 (301)
Q Consensus 123 ~~~~~~~~~~~~-~~d~Vi~~Ag~~~~----~---~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS~~~~~~~~~~~ 193 (301)
| .+.+.+++++ ++|+|||+|+.... . ++...+++|+.|+.+++++|++.+++ +||++||..+||.... +
T Consensus 124 d-~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~-~ 201 (442)
T PLN02572 124 D-FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI-D 201 (442)
T ss_pred C-HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC-C
Confidence 9 8889998875 48999999975321 1 12344689999999999999998875 8999999999985421 1
Q ss_pred CCc-----------ch--hhcchhhHHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCc---------------
Q 022216 194 LNP-----------AY--IFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN--------------- 241 (301)
Q Consensus 194 ~~~-----------~~--~~~~~~~~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~--------------- 241 (301)
..+ +. .+..+.+.|+.+|.++|.+++ ++|++++++||+++|||.....
T Consensus 202 ~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~ 281 (442)
T PLN02572 202 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGV 281 (442)
T ss_pred CcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccc
Confidence 111 11 134556789999999998764 4699999999999999963210
Q ss_pred -----------------eeeccccccccCCCCHHHHHHHHHHHhcCCCCCC--cEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 242 -----------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSY--KVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 242 -----------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~--~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+...+......+|++++|++++++.++..+...+ .+||+++ ..++++|+++.|++
T Consensus 282 ~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs----~~~si~el~~~i~~ 355 (442)
T PLN02572 282 FGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT----EQFSVNELAKLVTK 355 (442)
T ss_pred hhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC----CceeHHHHHHHHHH
Confidence 1111122333479999999999998887653223 5788754 57999999999875
No 9
>PLN02214 cinnamoyl-CoA reductase
Probab=100.00 E-value=2e-31 Score=239.57 Aligned_cols=228 Identities=21% Similarity=0.244 Sum_probs=175.1
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh----ccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
++|+||||||+||||++++++|+++|++|+++.|+.+.... .......+++++.+|++| .+.+.+++.+ +|+||
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~Vi 86 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKAAIDG-CDGVF 86 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHHHHhc-CCEEE
Confidence 57899999999999999999999999999999998654221 111112468899999999 8899999999 99999
Q ss_pred EccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc-ccccccCCC---CCCcch-----hhcchhhHHHHHH
Q 022216 141 CATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI-LVNGAAMGQ---ILNPAY-----IFLNVFGLTLIAK 211 (301)
Q Consensus 141 ~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~-~~~~~~~~~---~~~~~~-----~~~~~~~~y~~sK 211 (301)
|+|+... .++...+++|+.|+.+++++|++.++++||++||. ++|+..... +..++. .+.++.+.|+.+|
T Consensus 87 h~A~~~~-~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK 165 (342)
T PLN02214 87 HTASPVT-DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGK 165 (342)
T ss_pred EecCCCC-CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHH
Confidence 9998653 45667789999999999999999999999999996 578743221 223331 1233567899999
Q ss_pred HHHHHHHH----HcCCcEEEEecCcccCCCCCCce----------eecc---ccccccCCCCHHHHHHHHHHHhcCCCCC
Q 022216 212 LQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI----------IMET---EDTLYEGTISRDQVAEVAVEALLHPESS 274 (301)
Q Consensus 212 ~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~----------~~~~---~~~~~~~~v~~~Dva~~~~~~l~~~~~~ 274 (301)
.++|+++. ++|++++++||++++||...... .... .......|++++|+|++++.+++.+..
T Consensus 166 ~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~- 244 (342)
T PLN02214 166 MVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSA- 244 (342)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCccc-
Confidence 99998774 35999999999999999643210 0000 011224689999999999999987653
Q ss_pred CcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 275 YKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 275 ~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++.||+++ ...+++|+++.|++
T Consensus 245 ~g~yn~~~----~~~~~~el~~~i~~ 266 (342)
T PLN02214 245 SGRYLLAE----SARHRGEVVEILAK 266 (342)
T ss_pred CCcEEEec----CCCCHHHHHHHHHH
Confidence 45899876 46799999999875
No 10
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.98 E-value=4.9e-31 Score=237.84 Aligned_cols=233 Identities=19% Similarity=0.098 Sum_probs=174.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc--cCCCCeEEEEccCCCChHhHHHHhcC-CCCEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV 140 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi 140 (301)
+++|+||||||+||||++++++|+++|++|++++|+......... ....++.++.+|++| .+.+.+.+++ ++|+||
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~vi 80 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-AAKLRKAIAEFKPEIVF 80 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-HHHHHHHHhhcCCCEEE
Confidence 357999999999999999999999999999999988764332211 122467789999999 8889888886 479999
Q ss_pred EccCCCC----CCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEecccccccccCCC-CCCcchhhcchhhHHHHHHHHH
Q 022216 141 CATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKLQA 214 (301)
Q Consensus 141 ~~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~-~~~~~~~~~~~~~~y~~sK~~~ 214 (301)
|+||... ..++...+++|+.++.++++++++.+ +++||++||..+|+..... +..+ ..+..+.+.|+.+|.++
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e-~~~~~p~~~Y~~sK~~~ 159 (349)
T TIGR02622 81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRE-TDPLGGHDPYSSSKACA 159 (349)
T ss_pred ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCcc-CCCCCCCCcchhHHHHH
Confidence 9998532 23456678999999999999998876 7899999999999764221 2222 22345567899999999
Q ss_pred HHHHHH-----------cCCcEEEEecCcccCCCCC--Cc--------------eeeccccccccCCCCHHHHHHHHHHH
Q 022216 215 EQYIRK-----------SGINYTIIRPGGLRNEPPT--GN--------------IIMETEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 215 e~~~~~-----------~~i~~~~irpg~v~~~~~~--~~--------------~~~~~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
|.+++. .+++++++||++++||... +. +... .......|+|++|++++++.+
T Consensus 160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~-~g~~~rd~i~v~D~a~a~~~~ 238 (349)
T TIGR02622 160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIR-NPDATRPWQHVLEPLSGYLLL 238 (349)
T ss_pred HHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEEC-CCCcccceeeHHHHHHHHHHH
Confidence 987753 2899999999999998531 11 1122 233345789999999999877
Q ss_pred hcCC----CCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 268 LLHP----ESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 268 l~~~----~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+... ...+++||++++++ +.+++.|+++.+.+
T Consensus 239 ~~~~~~~~~~~~~~yni~s~~~-~~~s~~~~~~~i~~ 274 (349)
T TIGR02622 239 AEKLFTGQAEFAGAWNFGPRAS-DNARVVELVVDALE 274 (349)
T ss_pred HHHHhhcCccccceeeeCCCcc-cCcCHHHHHHHHHH
Confidence 6531 12357999987422 68999999987754
No 11
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.97 E-value=1.8e-30 Score=231.46 Aligned_cols=229 Identities=20% Similarity=0.255 Sum_probs=170.4
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh---ccc--cCCCCeEEEEccCCCChHhHHHHhcCCCCEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~---~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 139 (301)
++|+||||||+||||++++++|+++|++|+++.|+...... +.. ....+++++.+|++| .+.+.+++++ +|+|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~V 80 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLE-EGSFDSVVDG-CEGV 80 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccC-cchHHHHHcC-CCEE
Confidence 36899999999999999999999999999999988654221 111 113478999999999 7889999999 9999
Q ss_pred EEccCCCCC--CCCC-CceeeehHHHHHHHHHHHHc-CCCEEEEeccccc--ccccC---CCCCCcchhhc-----chhh
Q 022216 140 VCATGFQPG--WDLF-APWKVDNFGTVNLVEACRKR-GVNRFILISSILV--NGAAM---GQILNPAYIFL-----NVFG 205 (301)
Q Consensus 140 i~~Ag~~~~--~~~~-~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~~--~~~~~---~~~~~~~~~~~-----~~~~ 205 (301)
||+|+.... .+.. .++++|+.|+.++++++++. ++++||++||.++ |+... +.+..++.+.. ...+
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~ 160 (322)
T PLN02662 81 FHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKL 160 (322)
T ss_pred EEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccc
Confidence 999986432 2332 57789999999999999887 7899999999864 65321 11222322111 1125
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCce--e-------ecc---ccccccCCCCHHHHHHHHHHHhc
Q 022216 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI--I-------MET---EDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 206 ~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~--~-------~~~---~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
.|+.+|..+|++++ +++++++++||++++||...... . ... .......|+|++|+|++++.++.
T Consensus 161 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 240 (322)
T PLN02662 161 WYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFE 240 (322)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhc
Confidence 79999999998764 46999999999999998643210 0 000 11223468999999999999998
Q ss_pred CCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 270 HPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 270 ~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
.+... ..|++.+ ..++++|+++.+.+
T Consensus 241 ~~~~~-~~~~~~g----~~~s~~e~~~~i~~ 266 (322)
T PLN02662 241 IPSAS-GRYCLVE----RVVHYSEVVKILHE 266 (322)
T ss_pred CcCcC-CcEEEeC----CCCCHHHHHHHHHH
Confidence 76543 4688864 67999999999875
No 12
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.97 E-value=2.9e-30 Score=229.77 Aligned_cols=211 Identities=26% Similarity=0.365 Sum_probs=168.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~ 146 (301)
|+||||||||+||++++++|+++|++|+++.|+.++...+. ..+++++.+|++| .+++.+++.+ +|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~---~~~v~~v~~Dl~d-~~~l~~al~g-~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK---EWGAELVYGDLSL-PETLPPSFKG-VTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh---hcCCEEEECCCCC-HHHHHHHHCC-CCEEEECCCCC
Confidence 58999999999999999999999999999999876543322 2478999999999 8999999999 99999998643
Q ss_pred CCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEE
Q 022216 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (301)
Q Consensus 147 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~ 226 (301)
..+...++++|+.++.+++++|++.+++|||++||..++. + +...|..+|..+|+++++.+++++
T Consensus 76 -~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~----------~----~~~~~~~~K~~~e~~l~~~~l~~t 140 (317)
T CHL00194 76 -PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ----------Y----PYIPLMKLKSDIEQKLKKSGIPYT 140 (317)
T ss_pred -CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc----------c----CCChHHHHHHHHHHHHHHcCCCeE
Confidence 2344567789999999999999999999999999964211 0 013467899999999999999999
Q ss_pred EEecCcccCCCCCC--------ceeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHh
Q 022216 227 IIRPGGLRNEPPTG--------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSI 298 (301)
Q Consensus 227 ~irpg~v~~~~~~~--------~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i 298 (301)
++||+.+++..... ............++++++|+|++++.++..+...+++||++++ +.+|++|+++.+
T Consensus 141 ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~---~~~s~~el~~~~ 217 (317)
T CHL00194 141 IFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGP---KSWNSSEIISLC 217 (317)
T ss_pred EEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCC---CccCHHHHHHHH
Confidence 99999887652111 1111111222346899999999999999877767899999995 899999999998
Q ss_pred hc
Q 022216 299 KQ 300 (301)
Q Consensus 299 ~~ 300 (301)
.+
T Consensus 218 ~~ 219 (317)
T CHL00194 218 EQ 219 (317)
T ss_pred HH
Confidence 75
No 13
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.97 E-value=2.4e-30 Score=234.71 Aligned_cols=226 Identities=18% Similarity=0.083 Sum_probs=172.6
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
++|+||||||+||||+++++.|+++|++|++++|...... ........++.+|++| .+.+.+.+.+ +|+|||+|+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---SEDMFCHEFHLVDLRV-MENCLKVTKG-VDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---ccccccceEEECCCCC-HHHHHHHHhC-CCEEEEccc
Confidence 5789999999999999999999999999999998643211 1011236788999999 7888888888 999999997
Q ss_pred CCCC-----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCC----CCCcch-hhcchhhHHHHHHHHH
Q 022216 145 FQPG-----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQ----ILNPAY-IFLNVFGLTLIAKLQA 214 (301)
Q Consensus 145 ~~~~-----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~----~~~~~~-~~~~~~~~y~~sK~~~ 214 (301)
.... .++...++.|+.++.+++++|++.++++|||+||..+|+..... +..++. .+..+.+.|+.+|.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~ 174 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 174 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHH
Confidence 5421 23344567899999999999999999999999999999865321 122221 1445677899999999
Q ss_pred HHHHH----HcCCcEEEEecCcccCCCCCC--------------------ceeeccccccccCCCCHHHHHHHHHHHhcC
Q 022216 215 EQYIR----KSGINYTIIRPGGLRNEPPTG--------------------NIIMETEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 215 e~~~~----~~~i~~~~irpg~v~~~~~~~--------------------~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
|++++ ++|++++++||++++||.... .+.+.+......+++|++|++++++.++..
T Consensus 175 E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~ 254 (370)
T PLN02695 175 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKS 254 (370)
T ss_pred HHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence 98764 469999999999999985321 001111222234689999999999887776
Q ss_pred CCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 271 PESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 271 ~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+ .+++||++++ +.++++|+++.+.+
T Consensus 255 ~--~~~~~nv~~~---~~~s~~el~~~i~~ 279 (370)
T PLN02695 255 D--FREPVNIGSD---EMVSMNEMAEIALS 279 (370)
T ss_pred c--CCCceEecCC---CceeHHHHHHHHHH
Confidence 4 3578999986 89999999998864
No 14
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.97 E-value=2.4e-30 Score=230.91 Aligned_cols=229 Identities=24% Similarity=0.326 Sum_probs=170.7
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh---ccc--cCCCCeEEEEccCCCChHhHHHHhcCCCCEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~---~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 139 (301)
.+|+||||||+||||++++++|+++|++|+++.|+....+. ... ....+++++.+|++| .+.+.+++++ +|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~v 81 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE-ESSFEQAIEG-CDAV 81 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCC-cchHHHHHhC-CCEE
Confidence 47899999999999999999999999999999998764332 111 123478999999999 7889999999 9999
Q ss_pred EEccCCCCC--CCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEecccccc--cccC---CCCCCcchhh-----cchhh
Q 022216 140 VCATGFQPG--WDL-FAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVN--GAAM---GQILNPAYIF-----LNVFG 205 (301)
Q Consensus 140 i~~Ag~~~~--~~~-~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~~~--~~~~---~~~~~~~~~~-----~~~~~ 205 (301)
||+|+.... .+. ...+++|+.|+.++++++++. +++|||++||.++| +... +.+..++... ..+.+
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 161 (322)
T PLN02986 82 FHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN 161 (322)
T ss_pred EEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence 999986432 222 346789999999999999885 68899999998764 3211 1112222111 12346
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCce------e---eccc---cccccCCCCHHHHHHHHHHHhc
Q 022216 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI------I---METE---DTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 206 ~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~------~---~~~~---~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
.|+.+|..+|++++ +++++++++||++++||...... . .... ......+++++|+|++++.++.
T Consensus 162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~ 241 (322)
T PLN02986 162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALE 241 (322)
T ss_pred chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhc
Confidence 79999999997654 46999999999999998643210 0 0111 1122468999999999999998
Q ss_pred CCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 270 HPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 270 ~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
.+... +.||+.+ +.++++|+++.|++
T Consensus 242 ~~~~~-~~yni~~----~~~s~~e~~~~i~~ 267 (322)
T PLN02986 242 TPSAN-GRYIIDG----PIMSVNDIIDILRE 267 (322)
T ss_pred CcccC-CcEEEec----CCCCHHHHHHHHHH
Confidence 87644 4899843 67999999999875
No 15
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.97 E-value=2e-30 Score=251.32 Aligned_cols=230 Identities=15% Similarity=0.196 Sum_probs=176.0
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+++|+||||||+||||++++++|+++ |++|++++|......... ...+++++.+|++|..+.+.+++.+ +|+|||+
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~--~~~~~~~~~gDl~d~~~~l~~~l~~-~D~ViHl 389 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL--GHPRFHFVEGDISIHSEWIEYHIKK-CDVVLPL 389 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc--CCCceEEEeccccCcHHHHHHHhcC-CCEEEEC
Confidence 46789999999999999999999986 799999999775443332 2347899999999833346778888 9999999
Q ss_pred cCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchh-----h-cchhhHHHHHHH
Q 022216 143 TGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI-----F-LNVFGLTLIAKL 212 (301)
Q Consensus 143 Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~-----~-~~~~~~y~~sK~ 212 (301)
|+.... .++...+++|+.++.+++++|++.+ ++|||+||.++||.....+..++.+ + .++.+.|+.+|.
T Consensus 390 Aa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~ 468 (660)
T PRK08125 390 VAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ 468 (660)
T ss_pred ccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence 986442 2344567899999999999999988 7999999999998654334344332 1 134467999999
Q ss_pred HHHHHHH----HcCCcEEEEecCcccCCCCCC-----------------------ceeeccccccccCCCCHHHHHHHHH
Q 022216 213 QAEQYIR----KSGINYTIIRPGGLRNEPPTG-----------------------NIIMETEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 213 ~~e~~~~----~~~i~~~~irpg~v~~~~~~~-----------------------~~~~~~~~~~~~~~v~~~Dva~~~~ 265 (301)
++|++++ .++++++++||++++||.... .+...+......++++++|++++++
T Consensus 469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~ 548 (660)
T PRK08125 469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF 548 (660)
T ss_pred HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence 9998874 468999999999999986421 0111122233456999999999998
Q ss_pred HHhcCCC--CCCcEEEeecCCCCC-CcCHHHHHHHhhc
Q 022216 266 EALLHPE--SSYKVVEIISRVDAP-KRSYEDLFGSIKQ 300 (301)
Q Consensus 266 ~~l~~~~--~~~~~~~v~~~~~~~-~~s~~e~~~~i~~ 300 (301)
.++.++. ..+++||++++ + .++++|+++.+.+
T Consensus 549 ~~l~~~~~~~~g~iyni~~~---~~~~s~~el~~~i~~ 583 (660)
T PRK08125 549 RIIENKDNRCDGQIINIGNP---DNEASIRELAEMLLA 583 (660)
T ss_pred HHHhccccccCCeEEEcCCC---CCceeHHHHHHHHHH
Confidence 8887653 34779999984 5 6999999999865
No 16
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.97 E-value=4.3e-30 Score=229.52 Aligned_cols=229 Identities=24% Similarity=0.279 Sum_probs=171.4
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhc---cc--cCCCCeEEEEccCCCChHhHHHHhcCCCCEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~---~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 139 (301)
++|+||||||+||||++++++|+++|++|+++.|+....... .. ....++.++.+|++| .+.+.+++++ +|+|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~-~d~v 81 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD-EGSFELAIDG-CETV 81 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCC-chHHHHHHcC-CCEE
Confidence 378999999999999999999999999999988887643321 11 112468899999999 7889999998 9999
Q ss_pred EEccCCCCC----CCCCCceeeehHHHHHHHHHHHHc-CCCEEEEecccccccccC-----CCCCCcchhhc-----chh
Q 022216 140 VCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAAM-----GQILNPAYIFL-----NVF 204 (301)
Q Consensus 140 i~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~-----~~~~~~~~~~~-----~~~ 204 (301)
|||||.... .++...+++|+.|+.++++++.+. +.++||++||.++|+... ..+..++.+.. .+.
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~ 161 (325)
T PLN02989 82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERK 161 (325)
T ss_pred EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccc
Confidence 999985421 234567799999999999999875 568999999998875432 11222322211 123
Q ss_pred hHHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCc--ee-------ecccc---ccccCCCCHHHHHHHHHHHh
Q 022216 205 GLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN--II-------METED---TLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~--~~-------~~~~~---~~~~~~v~~~Dva~~~~~~l 268 (301)
+.|+.+|.++|+++. +++++++++||++++||..... +. ..... .....|++++|+|++++.++
T Consensus 162 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l 241 (325)
T PLN02989 162 QWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKAL 241 (325)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHh
Confidence 579999999998764 4699999999999999875431 10 01111 11236899999999999998
Q ss_pred cCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 269 LHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 269 ~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
..+.. ++.||+.+ ..++++|+++.|.+
T Consensus 242 ~~~~~-~~~~ni~~----~~~s~~ei~~~i~~ 268 (325)
T PLN02989 242 ETPSA-NGRYIIDG----PVVTIKDIENVLRE 268 (325)
T ss_pred cCccc-CceEEEec----CCCCHHHHHHHHHH
Confidence 87653 45899843 57999999999875
No 17
>PLN02650 dihydroflavonol-4-reductase
Probab=99.97 E-value=7.6e-30 Score=230.27 Aligned_cols=229 Identities=20% Similarity=0.225 Sum_probs=169.7
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc-----cCCCCeEEEEccCCCChHhHHHHhcCCCCEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 139 (301)
+.|+||||||+||||++++++|+++|++|++++|+.+....... ....++.++.+|++| .+.+.+++.+ +|+|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~~~-~d~V 81 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAV-EGSFDDAIRG-CTGV 81 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCC-hhhHHHHHhC-CCEE
Confidence 36899999999999999999999999999999998755432111 012358899999999 7889999999 9999
Q ss_pred EEccCCCCC--CCC-CCceeeehHHHHHHHHHHHHcC-CCEEEEecccccccccCC-CC-CCcch--------hhcchhh
Q 022216 140 VCATGFQPG--WDL-FAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMG-QI-LNPAY--------IFLNVFG 205 (301)
Q Consensus 140 i~~Ag~~~~--~~~-~~~~~~N~~g~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~-~~-~~~~~--------~~~~~~~ 205 (301)
||+|+.... .++ ...+++|+.|+.++++++++.+ +++|||+||.++|+.... .+ ..+.. ....+.+
T Consensus 82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (351)
T PLN02650 82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW 161 (351)
T ss_pred EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence 999985432 122 3678999999999999999876 789999999977754321 12 12221 0112335
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCcee---------ecccc-----ccccCCCCHHHHHHHHHHH
Q 022216 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNII---------METED-----TLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 206 ~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~~---------~~~~~-----~~~~~~v~~~Dva~~~~~~ 267 (301)
.|+.+|.++|++++ ++|++++++||++++||....... ..... ....+|++++|+|++++.+
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~ 241 (351)
T PLN02650 162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFL 241 (351)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHH
Confidence 79999999998664 469999999999999996432110 00000 0113689999999999998
Q ss_pred hcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 268 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 268 l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+..+... ..| ++++ ..+++.|+++.|++
T Consensus 242 l~~~~~~-~~~-i~~~---~~~s~~el~~~i~~ 269 (351)
T PLN02650 242 FEHPAAE-GRY-ICSS---HDATIHDLAKMLRE 269 (351)
T ss_pred hcCcCcC-ceE-EecC---CCcCHHHHHHHHHH
Confidence 8876543 467 4443 77999999999875
No 18
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.97 E-value=6.8e-30 Score=230.91 Aligned_cols=228 Identities=16% Similarity=0.125 Sum_probs=170.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhh---hccc-cCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLS-KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~---~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~ 141 (301)
|+||||||+||||++++++|+++|++++++.++..... .... ....++.++.+|++| .+++.+++.+ ++|+|||
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD-RAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcC-hHHHHHHHhhcCCCEEEE
Confidence 68999999999999999999999988665544332211 1111 012367889999999 7889888875 4999999
Q ss_pred ccCCCCC----CCCCCceeeehHHHHHHHHHHHHc---------CCCEEEEecccccccccCC--CCCCcchhhcchhhH
Q 022216 142 ATGFQPG----WDLFAPWKVDNFGTVNLVEACRKR---------GVNRFILISSILVNGAAMG--QILNPAYIFLNVFGL 206 (301)
Q Consensus 142 ~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iV~~SS~~~~~~~~~--~~~~~~~~~~~~~~~ 206 (301)
|||.... .++..++++|+.|+.++++++++. ++++||++||.++|+...+ .+..+. .+..+.+.
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-~~~~p~s~ 159 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-TPYAPSSP 159 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-CCCCCCCh
Confidence 9986432 245678899999999999999762 4579999999999985422 222232 23445678
Q ss_pred HHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCc---------------eeeccccccccCCCCHHHHHHHHHHH
Q 022216 207 TLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 207 y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~---------------~~~~~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
|+.+|.++|.+++ +.+++++++||++++||..... +...+......+++|++|+++++..+
T Consensus 160 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~ 239 (355)
T PRK10217 160 YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCV 239 (355)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHH
Confidence 9999999997764 4689999999999999874211 11112223345799999999999888
Q ss_pred hcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 268 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 268 l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+..+. .+++||++++ +.+++.|+++.+.+
T Consensus 240 ~~~~~-~~~~yni~~~---~~~s~~~~~~~i~~ 268 (355)
T PRK10217 240 ATTGK-VGETYNIGGH---NERKNLDVVETICE 268 (355)
T ss_pred HhcCC-CCCeEEeCCC---CcccHHHHHHHHHH
Confidence 87654 4689999996 89999999998764
No 19
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.97 E-value=3.8e-30 Score=231.55 Aligned_cols=227 Identities=18% Similarity=0.109 Sum_probs=173.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-----hhhcccc----CCCCeEEEEccCCCChHhHHHHhcC-CC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD-DS 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-----~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~-~~ 136 (301)
|+||||||+||||++++++|+++|++|++++|+.+. ...+... ...+++++.+|++| .+.+.+++.+ ++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~~~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTD-SSNLRRIIDEIKP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCC-HHHHHHHHHhCCC
Confidence 589999999999999999999999999999988642 1111100 12468999999999 8889999886 47
Q ss_pred CEEEEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCC---EEEEecccccccccCCCCCCcchhhcchhhHHHH
Q 022216 137 EAVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVN---RFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (301)
Q Consensus 137 d~Vi~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~---~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~ 209 (301)
|+|||+|+.... .+....+++|+.|+.+++++|++.+++ +||++||.++||.....+..++ .+..+.+.|+.
T Consensus 80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-~~~~p~~~Y~~ 158 (343)
T TIGR01472 80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-TPFYPRSPYAA 158 (343)
T ss_pred CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-CCCCCCChhHH
Confidence 999999986432 223445678999999999999988753 8999999999986544443333 23456788999
Q ss_pred HHHHHHHHHH----HcCCcEEEEecCcccCCCCCCce-------------------eeccccccccCCCCHHHHHHHHHH
Q 022216 210 AKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 210 sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~-------------------~~~~~~~~~~~~v~~~Dva~~~~~ 266 (301)
+|.++|.+++ ++++++...|+.+++||...... ...+......+|+|++|+|++++.
T Consensus 159 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~ 238 (343)
T TIGR01472 159 AKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWL 238 (343)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHH
Confidence 9999998774 35888888899888887532110 111222334578999999999988
Q ss_pred HhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 267 ALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 267 ~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++..+. ...||++++ +.+|++|+++.+.+
T Consensus 239 ~~~~~~--~~~yni~~g---~~~s~~e~~~~i~~ 267 (343)
T TIGR01472 239 MLQQDK--PDDYVIATG---ETHSVREFVEVSFE 267 (343)
T ss_pred HHhcCC--CccEEecCC---CceeHHHHHHHHHH
Confidence 887653 358999986 89999999998864
No 20
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.97 E-value=1.7e-29 Score=226.83 Aligned_cols=229 Identities=21% Similarity=0.187 Sum_probs=168.1
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc---c-cCCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---S-KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~---~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
.+|+||||||+||||++++++|+++|++|+++.|+........ . ....++.++.+|++| .+.+.+.+++ +|+||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~vi 85 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTD-EESFEAPIAG-CDLVF 85 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCC-hHHHHHHHhc-CCEEE
Confidence 4789999999999999999999999999998888865432110 0 011368899999999 7889999998 99999
Q ss_pred EccCCCCC--CCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEecccccccccC----CCCCCcch--------hhcchh
Q 022216 141 CATGFQPG--WDL-FAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAAM----GQILNPAY--------IFLNVF 204 (301)
Q Consensus 141 ~~Ag~~~~--~~~-~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~----~~~~~~~~--------~~~~~~ 204 (301)
|+|+.... .+. ..++++|+.|+.++++++.+. ++++||++||.++|+... +.+..+.. ....+.
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~ 165 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT 165 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence 99985432 122 235689999999999999876 578999999999997432 11212211 112356
Q ss_pred hHHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCce----------------eecc--cccc---ccCCCCHHH
Q 022216 205 GLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI----------------IMET--EDTL---YEGTISRDQ 259 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~----------------~~~~--~~~~---~~~~v~~~D 259 (301)
+.|+.+|.++|++++ +++++++++||++++||...... ...+ ..+. ..+++|++|
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D 245 (338)
T PLN00198 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVED 245 (338)
T ss_pred chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHH
Confidence 679999999997664 46999999999999999643210 0000 0111 136899999
Q ss_pred HHHHHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 260 VAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 260 va~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++++++.++..+.. ++.| ++++ ..++++|+++.+.+
T Consensus 246 ~a~a~~~~~~~~~~-~~~~-~~~~---~~~s~~el~~~i~~ 281 (338)
T PLN00198 246 VCRAHIFLAEKESA-SGRY-ICCA---ANTSVPELAKFLIK 281 (338)
T ss_pred HHHHHHHHhhCcCc-CCcE-EEec---CCCCHHHHHHHHHH
Confidence 99999888877643 3457 4443 67899999999865
No 21
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.97 E-value=6.6e-30 Score=235.42 Aligned_cols=224 Identities=17% Similarity=0.197 Sum_probs=169.1
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh-ccc-cCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-TLS-KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~-~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
-+.|+||||||+||||++++++|+++|++|++++|....... ... ....+++++.+|+.+ . .+.+ +|+|||
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~-~-----~~~~-~D~ViH 190 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVE-P-----ILLE-VDQIYH 190 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccc-c-----cccC-CCEEEE
Confidence 356899999999999999999999999999999876432111 100 012467888999987 2 2456 999999
Q ss_pred ccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcch----hhcchhhHHHHHHHH
Q 022216 142 ATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKLQ 213 (301)
Q Consensus 142 ~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~----~~~~~~~~y~~sK~~ 213 (301)
+|+.... .+...++++|+.|+.+++++|++.++ ++|++||.++||.....+..+++ .+..+.+.|+.+|..
T Consensus 191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~ 269 (436)
T PLN02166 191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRT 269 (436)
T ss_pred CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHH
Confidence 9985432 24456688999999999999999885 99999999999875544444432 234455779999999
Q ss_pred HHHHHH----HcCCcEEEEecCcccCCCCC---Cc--------------eeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 214 AEQYIR----KSGINYTIIRPGGLRNEPPT---GN--------------IIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 214 ~e~~~~----~~~i~~~~irpg~v~~~~~~---~~--------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
+|++++ .++++++++||+++||+... +. +...+.......|++++|++++++.+++.+.
T Consensus 270 aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~ 349 (436)
T PLN02166 270 AETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH 349 (436)
T ss_pred HHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence 998774 35899999999999998632 11 1111222334568999999999988887543
Q ss_pred CCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 273 SSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 273 ~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
.++||++++ +.++++|+++.|++
T Consensus 350 --~giyNIgs~---~~~Si~ela~~I~~ 372 (436)
T PLN02166 350 --VGPFNLGNP---GEFTMLELAEVVKE 372 (436)
T ss_pred --CceEEeCCC---CcEeHHHHHHHHHH
Confidence 458999986 89999999999875
No 22
>PLN02583 cinnamoyl-CoA reductase
Probab=99.97 E-value=3.2e-29 Score=221.06 Aligned_cols=231 Identities=16% Similarity=0.157 Sum_probs=167.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhh--hccc---cCCCCeEEEEccCCCChHhHHHHhcCCCCE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLS---KDNPSLQIVKADVTEGSAKLSEAIGDDSEA 138 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~--~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 138 (301)
-++|+||||||+|+||++++++|+++|++|+++.|+..... +... ....++.++.+|++| .+.+.+++.+ +|.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~~~~~l~~-~d~ 81 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLD-YHSILDALKG-CSG 81 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCC-HHHHHHHHcC-CCE
Confidence 35789999999999999999999999999999998643211 1111 113468899999999 8899999999 999
Q ss_pred EEEccCCCCC--CCCCCceeeehHHHHHHHHHHHHc-CCCEEEEeccccccccc---C--CCCCCcchhh-----cchhh
Q 022216 139 VVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAA---M--GQILNPAYIF-----LNVFG 205 (301)
Q Consensus 139 Vi~~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~~~~~~---~--~~~~~~~~~~-----~~~~~ 205 (301)
|+|.++.... .++..++++|+.|+.++++++.+. +++|||++||.+++... . ..+.++..+. .....
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 161 (297)
T PLN02583 82 LFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL 161 (297)
T ss_pred EEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence 9998764332 234567899999999999999876 57899999998765311 1 1122222110 01123
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCce-eecc----ccccccCCCCHHHHHHHHHHHhcCCCCCCc
Q 022216 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI-IMET----EDTLYEGTISRDQVAEVAVEALLHPESSYK 276 (301)
Q Consensus 206 ~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~-~~~~----~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~ 276 (301)
.|+.+|..+|+++. +.++++++|||++++||...... .... .......+++++|+|++++.+|+.+...+
T Consensus 162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~- 240 (297)
T PLN02583 162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYG- 240 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCC-
Confidence 69999999998773 46999999999999998653211 1111 01112358999999999999999776544
Q ss_pred EEEeecCCCCCCcCHHHHHHHhhc
Q 022216 277 VVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 277 ~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
.|.+++. ....+.++++++.+
T Consensus 241 r~~~~~~---~~~~~~~~~~~~~~ 261 (297)
T PLN02583 241 RYLCFNH---IVNTEEDAVKLAQM 261 (297)
T ss_pred cEEEecC---CCccHHHHHHHHHH
Confidence 7888873 44556778887765
No 23
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.97 E-value=4e-29 Score=225.71 Aligned_cols=229 Identities=19% Similarity=0.228 Sum_probs=167.8
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.+|+||||||+||||++++++|+++|++|++++|+..+...+... ...+++++.+|++| .+.+.+++.+ +|+|||+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~Vih~ 86 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEAVKG-CDGVFHV 86 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHHHcC-CCEEEEC
Confidence 578999999999999999999999999999999886654432211 13568899999999 8889999998 9999999
Q ss_pred cCCCCC------CCCCCc-----eeeehHHHHHHHHHHHHcC-CCEEEEecccccccccCC-----CCCCcch-hh----
Q 022216 143 TGFQPG------WDLFAP-----WKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMG-----QILNPAY-IF---- 200 (301)
Q Consensus 143 Ag~~~~------~~~~~~-----~~~N~~g~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~-----~~~~~~~-~~---- 200 (301)
|+.... .++... ++.|+.|+.+++++|++.+ +++||++||.++|+.... .+..+.. .+
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~ 166 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV 166 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence 986432 123333 3445699999999998875 789999999999985321 1222221 11
Q ss_pred ---cchhhHHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCcee------e---ccccc---------c---cc
Q 022216 201 ---LNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNII------M---ETEDT---------L---YE 252 (301)
Q Consensus 201 ---~~~~~~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~~------~---~~~~~---------~---~~ 252 (301)
..+...|+.+|.++|+++. .++++++++||++++||.....+. . .+... . ..
T Consensus 167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 246 (353)
T PLN02896 167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI 246 (353)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence 1233479999999998664 469999999999999996543211 0 01000 0 12
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 253 GTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 253 ~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
.|++++|+|++++.++..+.. +..|++ ++ ..++++|+++.+++
T Consensus 247 dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~---~~~s~~el~~~i~~ 289 (353)
T PLN02896 247 ALVHIEDICDAHIFLMEQTKA-EGRYIC-CV---DSYDMSELINHLSK 289 (353)
T ss_pred eEEeHHHHHHHHHHHHhCCCc-CccEEe-cC---CCCCHHHHHHHHHH
Confidence 589999999999999876543 346754 43 78999999999875
No 24
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.97 E-value=3.2e-29 Score=225.29 Aligned_cols=229 Identities=15% Similarity=0.101 Sum_probs=174.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-----hhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-----~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~- 134 (301)
+++|+||||||+||||++++++|+++|++|++++|+... .+.+.. ....++.++.+|++| .+.+.+++.+
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~ 82 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSD-ASSLRRWLDDI 82 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCC-HHHHHHHHHHc
Confidence 457999999999999999999999999999999987542 111110 012468899999999 8888888875
Q ss_pred CCCEEEEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCC-----EEEEecccccccccCCCCCCcchhhcchhh
Q 022216 135 DSEAVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVN-----RFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~-----~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
++|+|||||+.... .++...+++|+.|+.++++++++.+++ +||++||.++||.... +..++. +..+.+
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~-~~~p~~ 160 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETT-PFHPRS 160 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCC-CCCCCC
Confidence 47999999996432 244556789999999999999988764 8999999999987543 333332 345678
Q ss_pred HHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCce-------------------eeccccccccCCCCHHHHHH
Q 022216 206 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAE 262 (301)
Q Consensus 206 ~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~-------------------~~~~~~~~~~~~v~~~Dva~ 262 (301)
.|+.+|.++|.+++ ++++++...|+.+.++|...... ...+.......+++++|+|+
T Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~ 240 (340)
T PLN02653 161 PYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVE 240 (340)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHH
Confidence 89999999998774 46888888888888887432211 11122233457899999999
Q ss_pred HHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 263 VAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 263 ~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+++.++..+. +..||++++ +.++++|+++.+.+
T Consensus 241 a~~~~~~~~~--~~~yni~~g---~~~s~~e~~~~i~~ 273 (340)
T PLN02653 241 AMWLMLQQEK--PDDYVVATE---ESHTVEEFLEEAFG 273 (340)
T ss_pred HHHHHHhcCC--CCcEEecCC---CceeHHHHHHHHHH
Confidence 9998887653 467999986 89999999998864
No 25
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.97 E-value=2e-29 Score=232.56 Aligned_cols=224 Identities=17% Similarity=0.190 Sum_probs=168.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc-c-cCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL-S-KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~-~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.++|+||||||+||||++++++|+++|++|++++|......+.. . ....+++++.+|+.+ . .+.+ +|+|||
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~-~-----~l~~-~D~ViH 189 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVE-P-----ILLE-VDQIYH 189 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccC-h-----hhcC-CCEEEE
Confidence 36799999999999999999999999999999887543221111 0 023568889999987 3 2356 999999
Q ss_pred ccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcch----hhcchhhHHHHHHHH
Q 022216 142 ATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKLQ 213 (301)
Q Consensus 142 ~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~----~~~~~~~~y~~sK~~ 213 (301)
+|+.... .++...+++|+.|+.+++++|++.++ ++|++||..+|+.....+..+++ .+.++.+.|+.+|.+
T Consensus 190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~ 268 (442)
T PLN02206 190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRT 268 (442)
T ss_pred eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHH
Confidence 9985432 24556778999999999999999886 99999999999865444433332 233445789999999
Q ss_pred HHHHHH----HcCCcEEEEecCcccCCCCC---Cce--------------eeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 214 AEQYIR----KSGINYTIIRPGGLRNEPPT---GNI--------------IMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 214 ~e~~~~----~~~i~~~~irpg~v~~~~~~---~~~--------------~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
+|+++. +++++++++||++++||... +.+ ...+......++++++|+|++++.+++.+.
T Consensus 269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~ 348 (442)
T PLN02206 269 AETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH 348 (442)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC
Confidence 998774 36899999999999998631 111 111222233468999999999988887553
Q ss_pred CCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 273 SSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 273 ~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
..+||++++ +.++++|+++.+++
T Consensus 349 --~g~yNIgs~---~~~sl~Elae~i~~ 371 (442)
T PLN02206 349 --VGPFNLGNP---GEFTMLELAKVVQE 371 (442)
T ss_pred --CceEEEcCC---CceeHHHHHHHHHH
Confidence 458999996 89999999998875
No 26
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.97 E-value=2.6e-29 Score=220.56 Aligned_cols=209 Identities=22% Similarity=0.251 Sum_probs=167.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccCCC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQ 146 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag~~ 146 (301)
+||||||+|+||++++++|+++|++|+++.|. .+|+.| .+.+.+++.+ ++|+|||+|+..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~~~-~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDLTD-PEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCCCC-HHHHHHHHHhCCCCEEEECCccc
Confidence 48999999999999999999999999998874 479999 8899999887 469999999864
Q ss_pred CCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcC
Q 022216 147 PGW----DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG 222 (301)
Q Consensus 147 ~~~----~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~ 222 (301)
... .+...+++|+.++.++++++++.+. ++|++||.++|+.....+..++.+ ..+.+.|+.+|..+|++++..+
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~-~~~~~~Y~~~K~~~E~~~~~~~ 139 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDA-TNPLNVYGQSKLAGEQAIRAAG 139 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCC-CCCcchhhHHHHHHHHHHHHhC
Confidence 321 2344678999999999999998875 899999999997654444444432 3456789999999999998889
Q ss_pred CcEEEEecCcccCCCCCCcee-------ecc-----ccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcC
Q 022216 223 INYTIIRPGGLRNEPPTGNII-------MET-----EDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS 290 (301)
Q Consensus 223 i~~~~irpg~v~~~~~~~~~~-------~~~-----~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s 290 (301)
.+++++||++++|+.....+. ... ....+..+++++|+|+++..++..+...+++||++++ +.++
T Consensus 140 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~---~~~s 216 (287)
T TIGR01214 140 PNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANS---GQCS 216 (287)
T ss_pred CCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECC---CCcC
Confidence 999999999999986422110 000 0112346899999999999999876456789999995 8999
Q ss_pred HHHHHHHhhc
Q 022216 291 YEDLFGSIKQ 300 (301)
Q Consensus 291 ~~e~~~~i~~ 300 (301)
+.|+++.+.+
T Consensus 217 ~~e~~~~i~~ 226 (287)
T TIGR01214 217 WYEFAQAIFE 226 (287)
T ss_pred HHHHHHHHHH
Confidence 9999999865
No 27
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.97 E-value=2.3e-29 Score=222.12 Aligned_cols=212 Identities=13% Similarity=0.081 Sum_probs=159.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag~ 145 (301)
|+||||||+||||++++++|+++| +|++++|... .+.+|++| .+.+.+.+.+ ++|+|||||+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------~~~~Dl~d-~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------DYCGDFSN-PEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------cccCCCCC-HHHHHHHHHhcCCCEEEECCcc
Confidence 579999999999999999999999 7888877521 24589999 8889888875 48999999986
Q ss_pred CCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHc
Q 022216 146 QPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS 221 (301)
Q Consensus 146 ~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~ 221 (301)
... .++...+++|+.++.+++++|++.++ ++|++||..+|+.....|..++. +..|.+.|+.+|.++|++++.+
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~-~~~P~~~Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETD-ATAPLNVYGETKLAGEKALQEH 142 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCC-CCCCCCHHHHHHHHHHHHHHHh
Confidence 543 23345568999999999999999985 89999999999876555544443 3466788999999999999887
Q ss_pred CCcEEEEecCcccCCCCCCce-------------eeccc--cccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCC
Q 022216 222 GINYTIIRPGGLRNEPPTGNI-------------IMETE--DTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDA 286 (301)
Q Consensus 222 ~i~~~~irpg~v~~~~~~~~~-------------~~~~~--~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~ 286 (301)
..+++++||+++|||...+.+ ..... ......+...||+++++..++..+. .+++||++++
T Consensus 143 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-~~giyni~~~--- 218 (299)
T PRK09987 143 CAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-VAGLYHLVAS--- 218 (299)
T ss_pred CCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-CCCeEEeeCC---
Confidence 778999999999998643211 00000 0000011234556777766665443 3469999996
Q ss_pred CCcCHHHHHHHhhc
Q 022216 287 PKRSYEDLFGSIKQ 300 (301)
Q Consensus 287 ~~~s~~e~~~~i~~ 300 (301)
+.+|+.|+++.|.+
T Consensus 219 ~~~s~~e~~~~i~~ 232 (299)
T PRK09987 219 GTTTWHDYAALVFE 232 (299)
T ss_pred CCccHHHHHHHHHH
Confidence 88999999998743
No 28
>PLN02240 UDP-glucose 4-epimerase
Probab=99.97 E-value=5.9e-29 Score=224.48 Aligned_cols=233 Identities=19% Similarity=0.206 Sum_probs=174.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhh----hcc---ccCCCCeEEEEccCCCChHhHHHHhcC-
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK----TTL---SKDNPSLQIVKADVTEGSAKLSEAIGD- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~----~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~- 134 (301)
++++|+||||||+|+||++++++|+++|++|++++|...... ... .....++.++.+|++| .+.+.+++.+
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~l~~~~~~~ 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRD-KEALEKVFAST 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCC-HHHHHHHHHhC
Confidence 456899999999999999999999999999999987543211 111 1123468899999999 7888888763
Q ss_pred CCCEEEEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHH
Q 022216 135 DSEAVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s 210 (301)
++|+|||+|+.... .++...+++|+.++.++++++++.++++||++||..+|+...+.+..++ .+..+...|+.+
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-~~~~~~~~Y~~s 159 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-FPLSATNPYGRT 159 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-CCCCCCCHHHHH
Confidence 49999999986431 2445578999999999999999988899999999999986544443333 344566789999
Q ss_pred HHHHHHHHHH-----cCCcEEEEecCcccCCCCC-------Cc-------------------eeec------cccccccC
Q 022216 211 KLQAEQYIRK-----SGINYTIIRPGGLRNEPPT-------GN-------------------IIME------TEDTLYEG 253 (301)
Q Consensus 211 K~~~e~~~~~-----~~i~~~~irpg~v~~~~~~-------~~-------------------~~~~------~~~~~~~~ 253 (301)
|.++|++++. .+++++++|+++++|+... +. +... ........
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 239 (352)
T PLN02240 160 KLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRD 239 (352)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEe
Confidence 9999988752 4688999999988885311 00 0000 01223346
Q ss_pred CCCHHHHHHHHHHHhcC----CCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 254 TISRDQVAEVAVEALLH----PESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 254 ~v~~~Dva~~~~~~l~~----~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+++++|+|++++.++.. +...+++||++++ +.++++|+++.+.+
T Consensus 240 ~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~---~~~s~~el~~~i~~ 287 (352)
T PLN02240 240 YIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTG---KGTSVLEMVAAFEK 287 (352)
T ss_pred eEEHHHHHHHHHHHHhhhhhccCCCCceEEccCC---CcEeHHHHHHHHHH
Confidence 89999999998887753 2334679999986 99999999999864
No 29
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.97 E-value=4.6e-29 Score=223.94 Aligned_cols=230 Identities=18% Similarity=0.180 Sum_probs=171.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhc----cccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT----LSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~ 141 (301)
|+||||||+|+||++++++|+++|++|+++.|........ ......++.++.+|++| .+.+.+++.. ++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-EALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCC-HHHHHHHHhcCCCCEEEE
Confidence 5799999999999999999999999999987653322211 11012457788999999 7888888864 4999999
Q ss_pred ccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHH
Q 022216 142 ATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY 217 (301)
Q Consensus 142 ~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 217 (301)
+|+.... .+....+++|+.++.++++++++.++++||++||..+|+.....+..+..+...+...|+.+|.++|++
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~ 159 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQI 159 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHH
Confidence 9986432 233456789999999999999999999999999999998654444444433335578899999999988
Q ss_pred HHH-----cCCcEEEEecCcccCCCCC-----------Cce---------------eecc------ccccccCCCCHHHH
Q 022216 218 IRK-----SGINYTIIRPGGLRNEPPT-----------GNI---------------IMET------EDTLYEGTISRDQV 260 (301)
Q Consensus 218 ~~~-----~~i~~~~irpg~v~~~~~~-----------~~~---------------~~~~------~~~~~~~~v~~~Dv 260 (301)
++. .+++++++|++.++|+... ..+ ...+ ......++++++|+
T Consensus 160 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (338)
T PRK10675 160 LTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239 (338)
T ss_pred HHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence 753 3789999999888876311 000 0000 11223468999999
Q ss_pred HHHHHHHhcCC--CCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 261 AEVAVEALLHP--ESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 261 a~~~~~~l~~~--~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
|++++.++... ...+++||++++ +.++++|+++.+.+
T Consensus 240 a~~~~~~~~~~~~~~~~~~~ni~~~---~~~s~~e~~~~i~~ 278 (338)
T PRK10675 240 ADGHVAAMEKLANKPGVHIYNLGAG---VGSSVLDVVNAFSK 278 (338)
T ss_pred HHHHHHHHHhhhccCCCceEEecCC---CceeHHHHHHHHHH
Confidence 99998888752 234579999985 89999999998865
No 30
>PLN02686 cinnamoyl-CoA reductase
Probab=99.97 E-value=7.1e-29 Score=224.87 Aligned_cols=231 Identities=20% Similarity=0.215 Sum_probs=171.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--------CCCCeEEEEccCCCChHhHHHHhc
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--------DNPSLQIVKADVTEGSAKLSEAIG 133 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~ 133 (301)
..+++|+||||||+||||++++++|+++|++|+++.|+.+..+.+... ...++.++.+|++| .+.+.+++.
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTE-PESLHEAFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCC-HHHHHHHHH
Confidence 345689999999999999999999999999999988876544332110 01357899999999 888999999
Q ss_pred CCCCEEEEccCCCCCC----CCCCceeeehHHHHHHHHHHHHc-CCCEEEEeccc--cccccc--CC--CCCCcch----
Q 022216 134 DDSEAVVCATGFQPGW----DLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSI--LVNGAA--MG--QILNPAY---- 198 (301)
Q Consensus 134 ~~~d~Vi~~Ag~~~~~----~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~--~~~~~~--~~--~~~~~~~---- 198 (301)
+ +|+|||+|+..... .+....++|+.++.++++++++. +++|||++||. .+|+.. .. .+..+..
T Consensus 128 ~-~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~ 206 (367)
T PLN02686 128 G-CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE 206 (367)
T ss_pred h-ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence 9 99999999864322 12355688999999999999886 79999999996 467642 11 1122211
Q ss_pred -hhcchhhHHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCce------------eeccccccccCCCCHHHHH
Q 022216 199 -IFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI------------IMETEDTLYEGTISRDQVA 261 (301)
Q Consensus 199 -~~~~~~~~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~~------------~~~~~~~~~~~~v~~~Dva 261 (301)
.+..+...|+.+|.++|++++ ++|+++++|||++++||...... ...+ ... ..+++++|+|
T Consensus 207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g-~g~-~~~v~V~Dva 284 (367)
T PLN02686 207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLA-DGL-LATADVERLA 284 (367)
T ss_pred hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCC-CCC-cCeEEHHHHH
Confidence 123345679999999998774 46999999999999999642210 0001 111 2489999999
Q ss_pred HHHHHHhcCC--CCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 262 EVAVEALLHP--ESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 262 ~~~~~~l~~~--~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++++.+++.+ ...+++| ++++ +.++++|+++.|.+
T Consensus 285 ~A~~~al~~~~~~~~~~~y-i~~g---~~~s~~e~~~~i~~ 321 (367)
T PLN02686 285 EAHVCVYEAMGNKTAFGRY-ICFD---HVVSREDEAEELAR 321 (367)
T ss_pred HHHHHHHhccCCCCCCCcE-EEeC---CCccHHHHHHHHHH
Confidence 9999998753 2345677 7775 88999999999875
No 31
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=8e-29 Score=207.66 Aligned_cols=227 Identities=18% Similarity=0.098 Sum_probs=179.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCC-----chhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDL-----DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEA 138 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~ 138 (301)
|++|||||+||||+++++.++++.. +|++++.-. +.+..+. ..++..++++|+.| .+.+.+.+++ ++|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~--~~~~~~fv~~DI~D-~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE--DSPRYRFVQGDICD-RELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh--cCCCceEEeccccC-HHHHHHHHHhcCCCe
Confidence 5899999999999999999999864 466665431 2222222 45799999999999 8999999985 5999
Q ss_pred EEEccCCCC----CCCCCCceeeehHHHHHHHHHHHHcCCC-EEEEecccccccccCCC-CCCcchhhcchhhHHHHHHH
Q 022216 139 VVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKL 212 (301)
Q Consensus 139 Vi~~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS~~~~~~~~~~-~~~~~~~~~~~~~~y~~sK~ 212 (301)
|+|.|+=.+ -.++..++++|+.||++|++++++...+ ||+++|+--|||+.... +.-.+..+.+|.++|.+||+
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKA 157 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKA 157 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhh
Confidence 999998443 2467788999999999999999998754 99999999999987653 22334455667788889999
Q ss_pred HHHHHHH----HcCCcEEEEecCcccCCCCCCc---------------eeeccccccccCCCCHHHHHHHHHHHhcCCCC
Q 022216 213 QAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHPES 273 (301)
Q Consensus 213 ~~e~~~~----~~~i~~~~irpg~v~~~~~~~~---------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~ 273 (301)
.++.+++ .+|+++++.|+.+-|||..... +.+-+.......|++++|-++++...|.....
T Consensus 158 asD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~ 237 (340)
T COG1088 158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI 237 (340)
T ss_pred hHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC
Confidence 9987665 5899999999999999954322 22334445556799999999999888887764
Q ss_pred CCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 274 SYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 274 ~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
|++|||+++ ...+-.|+++.|++
T Consensus 238 -GE~YNIgg~---~E~~Nlevv~~i~~ 260 (340)
T COG1088 238 -GETYNIGGG---NERTNLEVVKTICE 260 (340)
T ss_pred -CceEEeCCC---ccchHHHHHHHHHH
Confidence 999999996 77788888888765
No 32
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.96 E-value=3.2e-28 Score=221.92 Aligned_cols=218 Identities=25% Similarity=0.335 Sum_probs=169.2
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhc-----cccCCCCeEEEEccCCCChHhHHHHhcC---C
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-----LSKDNPSLQIVKADVTEGSAKLSEAIGD---D 135 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~ 135 (301)
.++++||||||+|+||++++++|+++|++|+++.|+..+.... ......+++++.+|++| .+.+.+++.+ +
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~~~~ 136 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHhCCC
Confidence 4578999999999999999999999999999999987543210 00123578999999999 8889888873 3
Q ss_pred CCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHH
Q 022216 136 SEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE 215 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e 215 (301)
+|+||||++.... .....+++|+.++.++++++++.++++||++||.++|+ +...|..+|...|
T Consensus 137 ~D~Vi~~aa~~~~-~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~---------------p~~~~~~sK~~~E 200 (390)
T PLN02657 137 VDVVVSCLASRTG-GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK---------------PLLEFQRAKLKFE 200 (390)
T ss_pred CcEEEECCccCCC-CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC---------------cchHHHHHHHHHH
Confidence 9999999985332 23456789999999999999999999999999987652 1244678999999
Q ss_pred HHHHH--cCCcEEEEecCcccCCCC-------CCc-eeeccccc-cccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCC
Q 022216 216 QYIRK--SGINYTIIRPGGLRNEPP-------TGN-IIMETEDT-LYEGTISRDQVAEVAVEALLHPESSYKVVEIISRV 284 (301)
Q Consensus 216 ~~~~~--~~i~~~~irpg~v~~~~~-------~~~-~~~~~~~~-~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~ 284 (301)
+.++. .++++++|||+.++++.. .+. +.+.+... ....+++++|+|++++.++.++...+++||++++
T Consensus 201 ~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp- 279 (390)
T PLN02657 201 AELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGP- 279 (390)
T ss_pred HHHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCC-
Confidence 88875 899999999999987532 111 11222222 2234699999999999988777666789999873
Q ss_pred CCCCcCHHHHHHHhhc
Q 022216 285 DAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 285 ~~~~~s~~e~~~~i~~ 300 (301)
++.+|++|+++.+.+
T Consensus 280 -~~~~S~~Eia~~l~~ 294 (390)
T PLN02657 280 -GKALTPLEQGEMLFR 294 (390)
T ss_pred -CcccCHHHHHHHHHH
Confidence 268999999999865
No 33
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.96 E-value=3.5e-28 Score=225.35 Aligned_cols=228 Identities=36% Similarity=0.574 Sum_probs=175.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc------------CCCCeEEEEccCCCChHhHHH
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK------------DNPSLQIVKADVTEGSAKLSE 130 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~------------~~~~~~~~~~Dl~~~~~~~~~ 130 (301)
...+++||||||+|+||++++++|+++|++|++++|+.++...+... ...++.++.+|++| .+.+.+
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-~esI~~ 155 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-PDQIGP 155 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-HHHHHH
Confidence 34689999999999999999999999999999999998776543210 11358899999999 889999
Q ss_pred HhcCCCCEEEEccCCCCC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHH
Q 022216 131 AIGDDSEAVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (301)
Q Consensus 131 ~~~~~~d~Vi~~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~ 208 (301)
++++ +|+||||+|.... .++...+++|+.|+.++++++++.+++|||++||.+++.. +.+.. . ......|.
T Consensus 156 aLgg-iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~--g~p~~-~---~~sk~~~~ 228 (576)
T PLN03209 156 ALGN-ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKV--GFPAA-I---LNLFWGVL 228 (576)
T ss_pred HhcC-CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhccc--Ccccc-c---hhhHHHHH
Confidence 9999 9999999986532 2455667899999999999999999999999999875311 11111 1 12345577
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCcccCCCCC----CceeeccccccccCCCCHHHHHHHHHHHhcCCC-CCCcEEEeecC
Q 022216 209 IAKLQAEQYIRKSGINYTIIRPGGLRNEPPT----GNIIMETEDTLYEGTISRDQVAEVAVEALLHPE-SSYKVVEIISR 283 (301)
Q Consensus 209 ~sK~~~e~~~~~~~i~~~~irpg~v~~~~~~----~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~-~~~~~~~v~~~ 283 (301)
..|..+|+++++.|++|++||||++.+++.. +.+.....+....+.+.++|||++++.++.++. ..++++++..+
T Consensus 229 ~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~ 308 (576)
T PLN03209 229 CWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE 308 (576)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC
Confidence 8899999999999999999999999887432 222222222333457899999999988787564 56789999998
Q ss_pred CCCCCcCHHHHHHHh
Q 022216 284 VDAPKRSYEDLFGSI 298 (301)
Q Consensus 284 ~~~~~~s~~e~~~~i 298 (301)
+......+.|+++.|
T Consensus 309 ~~~p~~~~~~~~~~i 323 (576)
T PLN03209 309 TTAPLTPMEELLAKI 323 (576)
T ss_pred CCCCCCCHHHHHHhc
Confidence 666668888887765
No 34
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.1e-28 Score=218.80 Aligned_cols=222 Identities=26% Similarity=0.305 Sum_probs=173.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCC-CEEEEccCCC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDS-EAVVCATGFQ 146 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-d~Vi~~Ag~~ 146 (301)
.||||||+||||++++++|+++|++|++++|...+..... .++.++.+|++| .+.+.+...+ . |+|||+|+..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~-~~~~~~~~~~-~~d~vih~aa~~ 75 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----SGVEFVVLDLTD-RDLVDELAKG-VPDAVIHLAAQS 75 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----cccceeeecccc-hHHHHHHHhc-CCCEEEEccccC
Confidence 4999999999999999999999999999999876654322 578899999999 6778788877 7 9999999865
Q ss_pred CCCCC-----CCceeeehHHHHHHHHHHHHcCCCEEEEeccccccccc-CCCCCCcchhhcchhhHHHHHHHHHHHHHHH
Q 022216 147 PGWDL-----FAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAA-MGQILNPAYIFLNVFGLTLIAKLQAEQYIRK 220 (301)
Q Consensus 147 ~~~~~-----~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~-~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~ 220 (301)
..... ..++++|+.++.+++++|++.++++|||.||.++|+.. .+.+..++..+..+.+.|+.+|.++|++++.
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~ 155 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRA 155 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 53222 23789999999999999999889999998888877654 2223333323445555899999999998764
Q ss_pred ----cCCcEEEEecCcccCCCCCCc----ee------ec-cc--------cccccCCCCHHHHHHHHHHHhcCCCCCCcE
Q 022216 221 ----SGINYTIIRPGGLRNEPPTGN----II------ME-TE--------DTLYEGTISRDQVAEVAVEALLHPESSYKV 277 (301)
Q Consensus 221 ----~~i~~~~irpg~v~~~~~~~~----~~------~~-~~--------~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~ 277 (301)
.+++++++||++++||..... .. .. .. ......+++++|++++++.+++.+... .
T Consensus 156 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~ 233 (314)
T COG0451 156 YARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG--V 233 (314)
T ss_pred HHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc--E
Confidence 469999999999999875543 11 01 11 111124789999999999999887654 8
Q ss_pred EEeecCCCCC-CcCHHHHHHHhhc
Q 022216 278 VEIISRVDAP-KRSYEDLFGSIKQ 300 (301)
Q Consensus 278 ~~v~~~~~~~-~~s~~e~~~~i~~ 300 (301)
||+.++ . ..+++|+++.+.+
T Consensus 234 ~ni~~~---~~~~~~~e~~~~~~~ 254 (314)
T COG0451 234 FNIGSG---TAEITVRELAEAVAE 254 (314)
T ss_pred EEeCCC---CCcEEHHHHHHHHHH
Confidence 999985 5 8999999998864
No 35
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.96 E-value=1.9e-28 Score=221.16 Aligned_cols=229 Identities=16% Similarity=0.101 Sum_probs=168.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEeCC--chhhhccc-cCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDL--DKAKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~-V~~~~r~~--~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~ 141 (301)
|+||||||+||||++++++|+++|++ |+++++.. ........ ....+++++.+|++| .+++.+++.+ ++|+|||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICD-RAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCC-HHHHHHHHHhcCCCEEEE
Confidence 57999999999999999999999976 44444432 11111111 013467889999999 8889888864 4999999
Q ss_pred ccCCCC----CCCCCCceeeehHHHHHHHHHHHHc---------CCCEEEEecccccccccCC---------CCCCcchh
Q 022216 142 ATGFQP----GWDLFAPWKVDNFGTVNLVEACRKR---------GVNRFILISSILVNGAAMG---------QILNPAYI 199 (301)
Q Consensus 142 ~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iV~~SS~~~~~~~~~---------~~~~~~~~ 199 (301)
+||... ..++...+++|+.|+.+++++|++. +++++|++||.++|+.... .+...+..
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 998643 2345778999999999999999864 4569999999999985321 01111122
Q ss_pred hcchhhHHHHHHHHHHHHHH----HcCCcEEEEecCcccCCCCCCc---------------eeeccccccccCCCCHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQV 260 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~---------------~~~~~~~~~~~~~v~~~Dv 260 (301)
+..+.+.|+.+|.++|++++ .++++++++||+.++||..... +...+......++++++|+
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence 34567889999999998764 4689999999999999864211 1111222334568999999
Q ss_pred HHHHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 261 AEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 261 a~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
|+++..++..+. .+++||++++ +.+++.|+++.+++
T Consensus 240 a~a~~~~l~~~~-~~~~yni~~~---~~~s~~~~~~~i~~ 275 (352)
T PRK10084 240 ARALYKVVTEGK-AGETYNIGGH---NEKKNLDVVLTICD 275 (352)
T ss_pred HHHHHHHHhcCC-CCceEEeCCC---CcCcHHHHHHHHHH
Confidence 999988887643 5789999986 88999999887754
No 36
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.96 E-value=3e-29 Score=213.62 Aligned_cols=209 Identities=28% Similarity=0.359 Sum_probs=169.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccCCCC
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQP 147 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag~~~ 147 (301)
||||||+|+||++++++|+++|+.|+.+.|+......... ..++.++.+|+.| .+.+.+++.. ++|+|||+|+...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~dl~~-~~~~~~~~~~~~~d~vi~~a~~~~ 77 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK--KLNVEFVIGDLTD-KEQLEKLLEKANIDVVIHLAAFSS 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH--HTTEEEEESETTS-HHHHHHHHHHHTESEEEEEBSSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc--cceEEEEEeeccc-cccccccccccCceEEEEeecccc
Confidence 7999999999999999999999999988888765433221 1289999999999 8999998887 4699999998752
Q ss_pred ----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHH---
Q 022216 148 ----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK--- 220 (301)
Q Consensus 148 ----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~--- 220 (301)
..+....++.|+.++.++++++++.+++++|++||..+|+.....+..++... .+.+.|+.+|...|++++.
T Consensus 78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~-~~~~~Y~~~K~~~e~~~~~~~~ 156 (236)
T PF01370_consen 78 NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPI-NPLSPYGASKRAAEELLRDYAK 156 (236)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGC-CHSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccc
Confidence 12445677899999999999999999899999999999998855554554444 7778899999999987753
Q ss_pred -cCCcEEEEecCcccCCC----CCCc--------------eeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEee
Q 022216 221 -SGINYTIIRPGGLRNEP----PTGN--------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEII 281 (301)
Q Consensus 221 -~~i~~~~irpg~v~~~~----~~~~--------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~ 281 (301)
.+++++++||+.++|+. .... +..........++++++|+|++++.++.++...+++|||+
T Consensus 157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 58999999999999998 1111 1222233345578999999999999999887778999985
No 37
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.96 E-value=1.3e-28 Score=239.60 Aligned_cols=230 Identities=19% Similarity=0.203 Sum_probs=173.6
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEeCC--chhhhccc-cCCCCeEEEEccCCCChHhHHHHh--cCCCC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDL--DKAKTTLS-KDNPSLQIVKADVTEGSAKLSEAI--GDDSE 137 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~--G~~V~~~~r~~--~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~d 137 (301)
++|+||||||+||||++++++|+++ |++|++++|.. +....+.. ....+++++.+|++| .+.+...+ .+ +|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~~-~D 82 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS-ADLVNYLLITEG-ID 82 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCC-hHHHHHHHhhcC-CC
Confidence 4789999999999999999999998 68999888753 22222111 123578999999999 77777665 45 99
Q ss_pred EEEEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcC-CCEEEEecccccccccCCCCC--CcchhhcchhhHHHHH
Q 022216 138 AVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMGQIL--NPAYIFLNVFGLTLIA 210 (301)
Q Consensus 138 ~Vi~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~--~~~~~~~~~~~~y~~s 210 (301)
+|||+|+.... .+...++++|+.|+.++++++++.+ +++||++||..+||.....+. ..+..+..+.+.|+.+
T Consensus 83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s 162 (668)
T PLN02260 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT 162 (668)
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence 99999996542 2234567899999999999999987 789999999999986543321 1122233456789999
Q ss_pred HHHHHHHHH----HcCCcEEEEecCcccCCCCCCc---------------eeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 211 KLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 211 K~~~e~~~~----~~~i~~~~irpg~v~~~~~~~~---------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
|.++|++++ +++++++++||+++||+..... +...+......+++|++|+|+++..++..+
T Consensus 163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~ 242 (668)
T PLN02260 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242 (668)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC
Confidence 999998875 3689999999999999864321 111122233346899999999998888655
Q ss_pred CCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 272 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 272 ~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
. .+++||++++ +.+++.|+++.+++
T Consensus 243 ~-~~~vyni~~~---~~~s~~el~~~i~~ 267 (668)
T PLN02260 243 E-VGHVYNIGTK---KERRVIDVAKDICK 267 (668)
T ss_pred C-CCCEEEECCC---CeeEHHHHHHHHHH
Confidence 3 4679999985 89999999998875
No 38
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.96 E-value=1.9e-28 Score=218.67 Aligned_cols=214 Identities=21% Similarity=0.299 Sum_probs=163.9
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhcccc-CCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
+++|+||||||+||||++++++|+++| ++|++++|+......+... ...++.++.+|++| .+.+.+++++ +|+||
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~~~~-iD~Vi 79 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD-KERLTRALRG-VDYVV 79 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHhc-CCEEE
Confidence 357999999999999999999999986 7899988876543322111 12468899999999 8999999999 99999
Q ss_pred EccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHH
Q 022216 141 CATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQ 216 (301)
Q Consensus 141 ~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~ 216 (301)
|+||.... .++..++++|+.|+.++++++++.++++||++||...+ .|.+.|+.+|.++|+
T Consensus 80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~---------------~p~~~Y~~sK~~~E~ 144 (324)
T TIGR03589 80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA---------------NPINLYGATKLASDK 144 (324)
T ss_pred ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC---------------CCCCHHHHHHHHHHH
Confidence 99986431 23346789999999999999999988999999996311 224679999999998
Q ss_pred HHH-------HcCCcEEEEecCcccCCCCC-----------Cc--eeeccccccccCCCCHHHHHHHHHHHhcCCCCCCc
Q 022216 217 YIR-------KSGINYTIIRPGGLRNEPPT-----------GN--IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYK 276 (301)
Q Consensus 217 ~~~-------~~~i~~~~irpg~v~~~~~~-----------~~--~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~ 276 (301)
+++ ..|++++++|||+++|+... +. +... .......|++++|++++++.++.... .++
T Consensus 145 l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~~~~-~~~ 222 (324)
T TIGR03589 145 LFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLERML-GGE 222 (324)
T ss_pred HHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHhhCC-CCC
Confidence 763 36899999999999997421 10 1111 12223458999999999999987643 456
Q ss_pred EEEeecCCCCCCcCHHHHHHHhhc
Q 022216 277 VVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 277 ~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+| +..+ ..+++.|+++.+.+
T Consensus 223 ~~-~~~~---~~~sv~el~~~i~~ 242 (324)
T TIGR03589 223 IF-VPKI---PSMKITDLAEAMAP 242 (324)
T ss_pred EE-ccCC---CcEEHHHHHHHHHh
Confidence 66 3442 67999999998865
No 39
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.96 E-value=2.7e-28 Score=216.60 Aligned_cols=226 Identities=19% Similarity=0.113 Sum_probs=170.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCc--h---hhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEE
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLD--K---AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAV 139 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~--~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~V 139 (301)
+||||||+|+||++++++|+++| ++|++++|... . .+... ...++.++.+|++| .+++.+++++ ++|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE--DNPRYRFVKGDIGD-RELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc--cCCCcEEEEcCCcC-HHHHHHHHhhcCCCEE
Confidence 58999999999999999999987 78988876421 1 11111 12468899999999 8888888876 58999
Q ss_pred EEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCC-EEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHH
Q 022216 140 VCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 214 (301)
Q Consensus 140 i~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 214 (301)
||+|+.... .++..++++|+.++.++++++++.+.+ ++|++||..+|+.........+..+..+...|+.+|..+
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~ 157 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAAS 157 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHH
Confidence 999986432 345567899999999999999887543 899999999998654321112223345567899999999
Q ss_pred HHHHH----HcCCcEEEEecCcccCCCCCCc---------------eeeccccccccCCCCHHHHHHHHHHHhcCCCCCC
Q 022216 215 EQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSY 275 (301)
Q Consensus 215 e~~~~----~~~i~~~~irpg~v~~~~~~~~---------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~ 275 (301)
|.+++ +.+++++++||+.++|+..... +..........+++|++|+|+++..++.+.. .+
T Consensus 158 e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~~ 236 (317)
T TIGR01181 158 DHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-VG 236 (317)
T ss_pred HHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-CC
Confidence 98764 4689999999999999864211 1111122233468999999999988887653 56
Q ss_pred cEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 276 KVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 276 ~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++||++++ +.+++.|+++.|.+
T Consensus 237 ~~~~~~~~---~~~s~~~~~~~i~~ 258 (317)
T TIGR01181 237 ETYNIGGG---NERTNLEVVETILE 258 (317)
T ss_pred ceEEeCCC---CceeHHHHHHHHHH
Confidence 89999985 88999999999875
No 40
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.96 E-value=1.1e-28 Score=218.86 Aligned_cols=217 Identities=17% Similarity=0.219 Sum_probs=157.4
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC--hHh-HHHHhc-----CCCCEEE
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAK-LSEAIG-----DDSEAVV 140 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~-~~~~~~-----~~~d~Vi 140 (301)
||||||+||||++++++|+++|++++++.|+....... ..+..+|+.|. .+. +.+.+. + +|+||
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~d~Vi 73 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VNLVDLDIADYMDKEDFLAQIMAGDDFGD-IEAIF 73 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------HhhhhhhhhhhhhHHHHHHHHhcccccCC-ccEEE
Confidence 79999999999999999999999877777665432110 11234566551 223 333332 4 99999
Q ss_pred EccCCCCC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHH
Q 022216 141 CATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI 218 (301)
Q Consensus 141 ~~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~ 218 (301)
|+||.... .+....+++|+.++.+++++|++.++ ++|++||.++|+.....+..+ ..+.+|.+.|+.+|.++|+++
T Consensus 74 h~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E-~~~~~p~~~Y~~sK~~~E~~~ 151 (308)
T PRK11150 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEE-REYEKPLNVYGYSKFLFDEYV 151 (308)
T ss_pred ECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCcc-CCCCCCCCHHHHHHHHHHHHH
Confidence 99985332 23334678999999999999999887 799999999998754433322 234456678999999999877
Q ss_pred HH----cCCcEEEEecCcccCCCCCCc--e------------------eeccccccccCCCCHHHHHHHHHHHhcCCCCC
Q 022216 219 RK----SGINYTIIRPGGLRNEPPTGN--I------------------IMETEDTLYEGTISRDQVAEVAVEALLHPESS 274 (301)
Q Consensus 219 ~~----~~i~~~~irpg~v~~~~~~~~--~------------------~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~ 274 (301)
+. .+++++++||++++|+..... + ...+.......++|++|+|++++.++..+.
T Consensus 152 ~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~-- 229 (308)
T PRK11150 152 RQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV-- 229 (308)
T ss_pred HHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC--
Confidence 53 589999999999999864221 0 001111223468999999999988887653
Q ss_pred CcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 275 YKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 275 ~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+++||++++ +.+++.|+++.+.+
T Consensus 230 ~~~yni~~~---~~~s~~el~~~i~~ 252 (308)
T PRK11150 230 SGIFNCGTG---RAESFQAVADAVLA 252 (308)
T ss_pred CCeEEcCCC---CceeHHHHHHHHHH
Confidence 469999996 88999999999875
No 41
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.96 E-value=3.7e-28 Score=216.92 Aligned_cols=224 Identities=22% Similarity=0.224 Sum_probs=172.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~ 146 (301)
|+||||||+|+||++++++|+++|++|++++|+++...... ..+++++.+|++| .+++.+++.+ +|+|||+|+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~-~~~l~~~~~~-~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE---GLDVEIVEGDLRD-PASLRKAVAG-CRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc---cCCceEEEeeCCC-HHHHHHHHhC-CCEEEEeceec
Confidence 57999999999999999999999999999999876543322 2468899999999 8899999999 99999999754
Q ss_pred C--CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccccccc-CCCCCCcchhh--cchhhHHHHHHHHHHHHHHH-
Q 022216 147 P--GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAA-MGQILNPAYIF--LNVFGLTLIAKLQAEQYIRK- 220 (301)
Q Consensus 147 ~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~-~~~~~~~~~~~--~~~~~~y~~sK~~~e~~~~~- 220 (301)
. ..++...+++|+.++.++++++++.++++||++||..+|+.. .+.+..++.+. ....+.|+.+|.++|+++++
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 155 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEM 155 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHH
Confidence 2 234556788999999999999999988999999999999853 23333333221 12246799999999987754
Q ss_pred ---cCCcEEEEecCcccCCCCCCc-----eee-------ccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCC
Q 022216 221 ---SGINYTIIRPGGLRNEPPTGN-----IIM-------ETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVD 285 (301)
Q Consensus 221 ---~~i~~~~irpg~v~~~~~~~~-----~~~-------~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~ 285 (301)
.+++++++||+.++|+..... +.. .........+++++|+|++++.++..+. .+..|++.+
T Consensus 156 ~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~~~~--- 231 (328)
T TIGR03466 156 AAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGR-IGERYILGG--- 231 (328)
T ss_pred HHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCC-CCceEEecC---
Confidence 589999999999999864321 000 0000112357899999999998887754 566787743
Q ss_pred CCCcCHHHHHHHhhc
Q 022216 286 APKRSYEDLFGSIKQ 300 (301)
Q Consensus 286 ~~~~s~~e~~~~i~~ 300 (301)
+.+++.|+++.+.+
T Consensus 232 -~~~s~~e~~~~i~~ 245 (328)
T TIGR03466 232 -ENLTLKQILDKLAE 245 (328)
T ss_pred -CCcCHHHHHHHHHH
Confidence 78999999998864
No 42
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.96 E-value=6.7e-28 Score=213.36 Aligned_cols=209 Identities=17% Similarity=0.134 Sum_probs=160.8
Q ss_pred EEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccCCCC-
Q 022216 70 FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQP- 147 (301)
Q Consensus 70 lVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag~~~- 147 (301)
|||||+||||+++++.|+++|++|+++.+. ..+|++| .+.+.+.+.. ++|+|||||+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------~~~Dl~~-~~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------KELDLTR-QADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------ccCCCCC-HHHHHHHHhccCCCEEEEeeeeecc
Confidence 699999999999999999999988765322 1489999 7888888875 4899999998632
Q ss_pred ----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchh---hcchh-hHHHHHHHHHHHHHH
Q 022216 148 ----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI---FLNVF-GLTLIAKLQAEQYIR 219 (301)
Q Consensus 148 ----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~---~~~~~-~~y~~sK~~~e~~~~ 219 (301)
..++...+++|+.++.+++++|++.+++++|++||..+|+.....+..++.. +..+. ..|+.+|.++|++++
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~ 142 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQ 142 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHH
Confidence 1345567889999999999999999999999999999998765555554431 22333 359999999997653
Q ss_pred ----HcCCcEEEEecCcccCCCCCC-----ce------------------ee-ccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 220 ----KSGINYTIIRPGGLRNEPPTG-----NI------------------IM-ETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 220 ----~~~i~~~~irpg~v~~~~~~~-----~~------------------~~-~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
..+++++++||+.++|+.... .+ .. .........++|++|++++++.++..+
T Consensus 143 ~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~ 222 (306)
T PLN02725 143 AYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRY 222 (306)
T ss_pred HHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcc
Confidence 468999999999999986321 00 01 111233346899999999998888765
Q ss_pred CCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 272 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 272 ~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
. ..+.||++++ +.+++.|+++.+++
T Consensus 223 ~-~~~~~ni~~~---~~~s~~e~~~~i~~ 247 (306)
T PLN02725 223 S-GAEHVNVGSG---DEVTIKELAELVKE 247 (306)
T ss_pred c-cCcceEeCCC---CcccHHHHHHHHHH
Confidence 3 3457888875 89999999999875
No 43
>PLN00016 RNA-binding protein; Provisional
Probab=99.96 E-value=3e-27 Score=215.35 Aligned_cols=213 Identities=15% Similarity=0.192 Sum_probs=161.4
Q ss_pred cCCeEEEE----cCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc-------c-CCCCeEEEEccCCCChHhHHHHh
Q 022216 65 KQKKIFVA----GATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-------K-DNPSLQIVKADVTEGSAKLSEAI 132 (301)
Q Consensus 65 ~~~~vlVt----GatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~-------~-~~~~~~~~~~Dl~~~~~~~~~~~ 132 (301)
.+++|||| ||+|+||++++++|+++|++|+++.|+......... + ...+++++.+|+.| .+.+. ..
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-~~~~~-~~ 128 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD-VKSKV-AG 128 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH-HHhhh-cc
Confidence 35789999 999999999999999999999999998764322110 0 12358899999987 33332 22
Q ss_pred cCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHH
Q 022216 133 GDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKL 212 (301)
Q Consensus 133 ~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~ 212 (301)
.+ +|+|||+++. +..++.+++++|++.|+++||++||..+|+.....+..+.. +.++.. +|.
T Consensus 129 ~~-~d~Vi~~~~~------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~-~~~p~~----sK~ 190 (378)
T PLN00016 129 AG-FDVVYDNNGK------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGD-AVKPKA----GHL 190 (378)
T ss_pred CC-ccEEEeCCCC------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCC-cCCCcc----hHH
Confidence 35 9999999752 25678999999999999999999999999865444433321 122222 799
Q ss_pred HHHHHHHHcCCcEEEEecCcccCCCCCCc--------------eeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEE
Q 022216 213 QAEQYIRKSGINYTIIRPGGLRNEPPTGN--------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVV 278 (301)
Q Consensus 213 ~~e~~~~~~~i~~~~irpg~v~~~~~~~~--------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~ 278 (301)
.+|+++++.+++++++||++++|+..... +..........+++|++|+|++++.++.++...+++|
T Consensus 191 ~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~y 270 (378)
T PLN00016 191 EVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIF 270 (378)
T ss_pred HHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEE
Confidence 99999999999999999999999854321 1111222333468999999999999998876567899
Q ss_pred EeecCCCCCCcCHHHHHHHhhc
Q 022216 279 EIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 279 ~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
|++++ +.+++.|+++.|.+
T Consensus 271 ni~~~---~~~s~~el~~~i~~ 289 (378)
T PLN00016 271 NIVSD---RAVTFDGMAKACAK 289 (378)
T ss_pred EecCC---CccCHHHHHHHHHH
Confidence 99985 89999999999875
No 44
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.96 E-value=1.7e-27 Score=202.53 Aligned_cols=231 Identities=19% Similarity=0.202 Sum_probs=183.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc----hhhhccc--cCCCCeEEEEccCCCChHhHHHHhcC-CCCE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----KAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DSEA 138 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~----~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~ 138 (301)
+++||||||+||||+|++.+|+++|+.|++++.-.. .+..... .....+.++++|++| .+.+++.|+. ++|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D-~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLND-AEALEKLFSEVKFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCC-HHHHHHHHhhcCCce
Confidence 579999999999999999999999999999875332 2221111 134789999999999 8999999988 8999
Q ss_pred EEEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHH
Q 022216 139 VVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 214 (301)
Q Consensus 139 Vi~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 214 (301)
|+|.|+.... +++..++.+|+.|+.++++++++++++.+||.||+.+||.....|..+..+...|.+.|+.+|..+
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~i 160 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAI 160 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHH
Confidence 9999986542 567889999999999999999999999999999999999988877776665556889999999999
Q ss_pred HHHHHH----cCCcEEEEecCcccCCCCCCcee----------e----------------------ccccccccCCCCHH
Q 022216 215 EQYIRK----SGINYTIIRPGGLRNEPPTGNII----------M----------------------ETEDTLYEGTISRD 258 (301)
Q Consensus 215 e~~~~~----~~i~~~~irpg~v~~~~~~~~~~----------~----------------------~~~~~~~~~~v~~~ 258 (301)
|+.... .+..+..+|.++++|....+.+. . ..+.....+.+++-
T Consensus 161 E~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~ 240 (343)
T KOG1371|consen 161 EEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVL 240 (343)
T ss_pred HHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeE
Confidence 998864 46888999999998832111110 0 00112234578889
Q ss_pred HHHHHHHHHhcCCC--CCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 259 QVAEVAVEALLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 259 Dva~~~~~~l~~~~--~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
|.|+.++.++.... ....+||++++ ...+..||+..+++
T Consensus 241 Dla~~h~~al~k~~~~~~~~i~Nlgtg---~g~~V~~lv~a~~k 281 (343)
T KOG1371|consen 241 DLADGHVAALGKLRGAAEFGVYNLGTG---KGSSVLELVTAFEK 281 (343)
T ss_pred ehHHHHHHHhhccccchheeeEeecCC---CCccHHHHHHHHHH
Confidence 99999999997654 34458999886 88999999998875
No 45
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.95 E-value=2.2e-27 Score=230.95 Aligned_cols=229 Identities=22% Similarity=0.269 Sum_probs=169.7
Q ss_pred CeEEEEcCCchHHHHHHHHHH--HCCCeEEEEEeCCchh--hhcccc-CCCCeEEEEccCCCCh-----HhHHHHhcCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLL--AKGFAVKAGVRDLDKA--KTTLSK-DNPSLQIVKADVTEGS-----AKLSEAIGDDS 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~--~~G~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~-----~~~~~~~~~~~ 136 (301)
|+|||||||||||++++++|+ +.|++|++++|+.... ..+... ...+++++.+|++|+. +.+.+. .+ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~-~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD-I 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC-C
Confidence 589999999999999999999 5799999999965331 111111 1257899999999831 334444 67 9
Q ss_pred CEEEEccCCCC-CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcch-hhcchhhHHHHHHHHH
Q 022216 137 EAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY-IFLNVFGLTLIAKLQA 214 (301)
Q Consensus 137 d~Vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~-~~~~~~~~y~~sK~~~ 214 (301)
|+||||||... ..+....+++|+.|+.+++++|++.++++||++||..+||...+...++.. ....+.+.|+.+|..+
T Consensus 79 D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~ 158 (657)
T PRK07201 79 DHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEA 158 (657)
T ss_pred CEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHH
Confidence 99999998643 223445678999999999999999988999999999999765432211111 1223346799999999
Q ss_pred HHHHH-HcCCcEEEEecCcccCCCCCCcee-----------------------eccccccccCCCCHHHHHHHHHHHhcC
Q 022216 215 EQYIR-KSGINYTIIRPGGLRNEPPTGNII-----------------------METEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 215 e~~~~-~~~i~~~~irpg~v~~~~~~~~~~-----------------------~~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
|++++ ..+++++++||++++|+...+... ..........+++++|+++++..++..
T Consensus 159 E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~ 238 (657)
T PRK07201 159 EKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHK 238 (657)
T ss_pred HHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcC
Confidence 99887 478999999999999975432110 000111123578999999999888876
Q ss_pred CCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 271 PESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 271 ~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+...+++||++++ +.+++.|+++.+.+
T Consensus 239 ~~~~g~~~ni~~~---~~~s~~el~~~i~~ 265 (657)
T PRK07201 239 DGRDGQTFHLTDP---KPQRVGDIYNAFAR 265 (657)
T ss_pred cCCCCCEEEeCCC---CCCcHHHHHHHHHH
Confidence 6667889999985 89999999998865
No 46
>PLN02996 fatty acyl-CoA reductase
Probab=99.95 E-value=1.8e-27 Score=222.34 Aligned_cols=235 Identities=18% Similarity=0.193 Sum_probs=169.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCC---CeEEEEEeCCchh------h-hccc---------c--------CCCCeEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKA------K-TTLS---------K--------DNPSLQI 116 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G---~~V~~~~r~~~~~------~-~~~~---------~--------~~~~~~~ 116 (301)
+++|+|||||||||||+++++.|++.+ .+|+++.|..... . ++.. . ...++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 468999999999999999999999865 3689999976421 1 1100 0 0157899
Q ss_pred EEccCCCC------hHhHHHHhcCCCCEEEEccCCCC-CCCCCCceeeehHHHHHHHHHHHHc-CCCEEEEecccccccc
Q 022216 117 VKADVTEG------SAKLSEAIGDDSEAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGA 188 (301)
Q Consensus 117 ~~~Dl~~~------~~~~~~~~~~~~d~Vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~~~~~ 188 (301)
+.+|++++ .+.+.+++.+ +|+|||+|+... ..++...+++|+.|+.+++++|++. ++++||++||.++||.
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~-vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~ 167 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKE-IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE 167 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhC-CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence 99999842 3446677788 999999998654 3345567899999999999999986 6789999999999986
Q ss_pred cCCCCCCcchh--------------------------------------------------hcchhhHHHHHHHHHHHHH
Q 022216 189 AMGQILNPAYI--------------------------------------------------FLNVFGLTLIAKLQAEQYI 218 (301)
Q Consensus 189 ~~~~~~~~~~~--------------------------------------------------~~~~~~~y~~sK~~~e~~~ 218 (301)
..+...+..++ .....+.|+.+|.++|+++
T Consensus 168 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv 247 (491)
T PLN02996 168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLL 247 (491)
T ss_pred CCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHH
Confidence 44210000000 0112256999999999988
Q ss_pred HH--cCCcEEEEecCcccCCCCCCce----------------------eeccccccccCCCCHHHHHHHHHHHhcCC--C
Q 022216 219 RK--SGINYTIIRPGGLRNEPPTGNI----------------------IMETEDTLYEGTISRDQVAEVAVEALLHP--E 272 (301)
Q Consensus 219 ~~--~~i~~~~irpg~v~~~~~~~~~----------------------~~~~~~~~~~~~v~~~Dva~~~~~~l~~~--~ 272 (301)
++ .+++++++||++++|+...... ...+......+++++||++++++.++... .
T Consensus 248 ~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~ 327 (491)
T PLN02996 248 GNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGG 327 (491)
T ss_pred HHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhcc
Confidence 75 4899999999999997543210 01112233456899999999998888653 1
Q ss_pred -CCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 273 -SSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 273 -~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
..+.+||++++. ..++++.|+++.+.+
T Consensus 328 ~~~~~vYNi~s~~-~~~~s~~ei~~~~~~ 355 (491)
T PLN02996 328 QGSEIIYHVGSSL-KNPVKFSNLHDFAYR 355 (491)
T ss_pred CCCCcEEEecCCC-CCcccHHHHHHHHHH
Confidence 246789999831 268999999998754
No 47
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.95 E-value=1e-26 Score=207.36 Aligned_cols=228 Identities=23% Similarity=0.285 Sum_probs=169.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG 144 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag 144 (301)
+||||||+|+||++++++|+++|++|+++.|........... ...+++.+.+|+++ .+++.+++.. ++|+||||||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vv~~ag 79 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRD-RELLDRLFEEHKIDAVIHFAG 79 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCC-HHHHHHHHHhCCCcEEEECcc
Confidence 589999999999999999999999999876543221111110 11257889999999 8888888863 4999999998
Q ss_pred CCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHH
Q 022216 145 FQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK 220 (301)
Q Consensus 145 ~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~ 220 (301)
.... .++...++.|+.++.++++++++.+++++|++||..+|+.....+..++. +..+...|+.+|..+|++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~-~~~~~~~y~~sK~~~e~~~~~ 158 (328)
T TIGR01179 80 LIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDS-PLGPINPYGRSKLMSERILRD 158 (328)
T ss_pred ccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccC-CCCCCCchHHHHHHHHHHHHH
Confidence 6422 24556788999999999999999888899999999999765443333332 334567899999999987753
Q ss_pred -----cCCcEEEEecCcccCCCCCCce-------------------------eecc------ccccccCCCCHHHHHHHH
Q 022216 221 -----SGINYTIIRPGGLRNEPPTGNI-------------------------IMET------EDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 221 -----~~i~~~~irpg~v~~~~~~~~~-------------------------~~~~------~~~~~~~~v~~~Dva~~~ 264 (301)
.+++++++||+.++|+...+.+ ...+ .......+++++|+|+++
T Consensus 159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~ 238 (328)
T TIGR01179 159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH 238 (328)
T ss_pred HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence 6899999999999997432100 0000 111223589999999999
Q ss_pred HHHhcCC--CCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 265 VEALLHP--ESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 265 ~~~l~~~--~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+.++... ...+++||+.++ +.++++|+++.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~n~~~~---~~~s~~ei~~~~~~ 273 (328)
T TIGR01179 239 LAALEYLLNGGESHVYNLGYG---QGFSVLEVIEAFKK 273 (328)
T ss_pred HHHHhhhhcCCCcceEEcCCC---CcccHHHHHHHHHH
Confidence 8888642 235689999885 89999999999875
No 48
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.95 E-value=1.2e-27 Score=197.18 Aligned_cols=196 Identities=19% Similarity=0.195 Sum_probs=150.4
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCC-CCeEEEEccCCCChHhH-------HHHhcCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN-PSLQIVKADVTEGSAKL-------SEAIGDD 135 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~-------~~~~~~~ 135 (301)
+++|+++||||++|||.+++++|+++|++|++..|+.++++++..+.. ..+..+..|++| .+++ .+.+++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~- 81 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGR- 81 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCc-
Confidence 357999999999999999999999999999999999999998876555 578999999999 6553 344455
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|++|||||.... ++|+.++++|+.|.++..++. .+++.++||++||++.. . ++..
T Consensus 82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~---~---------~y~~ 149 (246)
T COG4221 82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR---Y---------PYPG 149 (246)
T ss_pred ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc---c---------cCCC
Confidence 9999999997542 478899999999999998887 45566799999999621 1 1122
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec---cccc--cccCCCCHHHHHHHHHHHhcCC
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME---TEDT--LYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~---~~~~--~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.+.|+.+|+...++.. ..+||++.|.||.+.+.......... ..+. .....+.++|+|+++.+++..|
T Consensus 150 ~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P 229 (246)
T COG4221 150 GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQP 229 (246)
T ss_pred CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence 4678899998876542 36899999999999665322221111 0111 1234789999999999999988
Q ss_pred CC
Q 022216 272 ES 273 (301)
Q Consensus 272 ~~ 273 (301)
..
T Consensus 230 ~~ 231 (246)
T COG4221 230 QH 231 (246)
T ss_pred Cc
Confidence 74
No 49
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=7.7e-27 Score=198.74 Aligned_cols=208 Identities=22% Similarity=0.272 Sum_probs=171.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag~ 145 (301)
|+|||||++|.+|.++++.|. .+++|+.++|.. .|++| .+.+.+.+.+ ++|+|||+|++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------~Ditd-~~~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE------------------LDITD-PDAVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------ccccC-hHHHHHHHHhhCCCEEEECccc
Confidence 359999999999999999998 678999987752 89999 8999999987 69999999997
Q ss_pred CC----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHc
Q 022216 146 QP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS 221 (301)
Q Consensus 146 ~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~ 221 (301)
.. +.+++..|.+|..|+.+++++|++.|. ++|++||-+||.+..+.+..++.. ..|.+.||.||+++|+.+++.
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~-~~P~nvYG~sKl~GE~~v~~~ 138 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDT-PNPLNVYGRSKLAGEEAVRAA 138 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCC-CCChhhhhHHHHHHHHHHHHh
Confidence 65 235567789999999999999999995 999999999998777666655543 467899999999999999999
Q ss_pred CCcEEEEecCcccCCCCCCce-----------eeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcC
Q 022216 222 GINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS 290 (301)
Q Consensus 222 ~i~~~~irpg~v~~~~~~~~~-----------~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s 290 (301)
+-+..+||.+++++....+.+ ........+..+++..|+|+++..++.... .+.+||+.+. ...|
T Consensus 139 ~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~-~~~~yH~~~~---g~~S 214 (281)
T COG1091 139 GPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK-EGGVYHLVNS---GECS 214 (281)
T ss_pred CCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc-cCcEEEEeCC---Cccc
Confidence 899999999999998653322 111123334568999999999988887765 3449999995 6689
Q ss_pred HHHHHHHhhc
Q 022216 291 YEDLFGSIKQ 300 (301)
Q Consensus 291 ~~e~~~~i~~ 300 (301)
|.|+++.|.+
T Consensus 215 wydfa~~I~~ 224 (281)
T COG1091 215 WYEFAKAIFE 224 (281)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 50
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.95 E-value=3.1e-28 Score=213.21 Aligned_cols=210 Identities=21% Similarity=0.288 Sum_probs=152.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag~ 145 (301)
|+|||||++|+||+++.+.|.+.|++|+.+.|. ..|++| .+.+.+.+.. ++|+||||||.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------~~dl~d-~~~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------DLDLTD-PEAVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------CS-TTS-HHHHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------hcCCCC-HHHHHHHHHHhCCCeEecccee
Confidence 689999999999999999999999999988654 589999 8888888876 69999999997
Q ss_pred CCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHc
Q 022216 146 QPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS 221 (301)
Q Consensus 146 ~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~ 221 (301)
... .+++..+++|+.++.+|+++|++.+. ++||+||..||++..+.+..++.. .+|.+.||.+|+++|+.+++.
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~-~~P~~~YG~~K~~~E~~v~~~ 139 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDP-PNPLNVYGRSKLEGEQAVRAA 139 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS-----SSHHHHHHHHHHHHHHHH
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCC-CCCCCHHHHHHHHHHHHHHHh
Confidence 642 35667889999999999999999985 999999999998776665555443 467899999999999999875
Q ss_pred CCcEEEEecCcccCCCCCCce-----------eeccccccccCCCCHHHHHHHHHHHhcCCC---CCCcEEEeecCCCCC
Q 022216 222 GINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALLHPE---SSYKVVEIISRVDAP 287 (301)
Q Consensus 222 ~i~~~~irpg~v~~~~~~~~~-----------~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~---~~~~~~~v~~~~~~~ 287 (301)
.-++.++|+++++|+...+.+ .+......+..+++++|+|+++..++++.. ..+++||+++. +
T Consensus 140 ~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~---~ 216 (286)
T PF04321_consen 140 CPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGP---E 216 (286)
T ss_dssp -SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---B---S
T ss_pred cCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecC---c
Confidence 559999999999998433221 111122334467899999999999887654 24689999996 8
Q ss_pred CcCHHHHHHHhhc
Q 022216 288 KRSYEDLFGSIKQ 300 (301)
Q Consensus 288 ~~s~~e~~~~i~~ 300 (301)
.+|+.|+++.+.+
T Consensus 217 ~~S~~e~~~~i~~ 229 (286)
T PF04321_consen 217 RVSRYEFAEAIAK 229 (286)
T ss_dssp -EEHHHHHHHHHH
T ss_pred ccCHHHHHHHHHH
Confidence 9999999998865
No 51
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.95 E-value=6.8e-27 Score=207.65 Aligned_cols=219 Identities=16% Similarity=0.145 Sum_probs=161.5
Q ss_pred EEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhc----CCCCEEEEcc
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG----DDSEAVVCAT 143 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~d~Vi~~A 143 (301)
||||||+|+||+++++.|+++|+ +|+++.|..... .+.. .....+..|+++ .+.+..... + +|+|||||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~---~~~~~~~~d~~~-~~~~~~~~~~~~~~-~D~vvh~A 74 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLN---LADLVIADYIDK-EDFLDRLEKGAFGK-IEAIFHQG 74 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhh---hhheeeeccCcc-hhHHHHHHhhccCC-CCEEEECc
Confidence 69999999999999999999997 788877654321 1110 112356678887 566655543 5 99999999
Q ss_pred CCCC--CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHH-
Q 022216 144 GFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK- 220 (301)
Q Consensus 144 g~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~- 220 (301)
+... ..++...+++|+.++.+++++|++.++ +||++||..+|+.... +..++..+..+.+.|+.+|..+|+++++
T Consensus 75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~ 152 (314)
T TIGR02197 75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVRRR 152 (314)
T ss_pred cccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHHHH
Confidence 8643 235556778999999999999998886 8999999999986533 2233333334677899999999988753
Q ss_pred -----cCCcEEEEecCcccCCCCCC--c-----------------eeec------cccccccCCCCHHHHHHHHHHHhcC
Q 022216 221 -----SGINYTIIRPGGLRNEPPTG--N-----------------IIME------TEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 221 -----~~i~~~~irpg~v~~~~~~~--~-----------------~~~~------~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
.+++++++||+.++|+.... . +.+. +......+++|++|++++++.++..
T Consensus 153 ~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~ 232 (314)
T TIGR02197 153 VLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN 232 (314)
T ss_pred hHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc
Confidence 35789999999999986421 0 0010 0112224689999999999988877
Q ss_pred CCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 271 PESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 271 ~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
. .+++||++++ ++++++|+++.|.+
T Consensus 233 -~-~~~~yni~~~---~~~s~~e~~~~i~~ 257 (314)
T TIGR02197 233 -G-VSGIFNLGTG---RARSFNDLADAVFK 257 (314)
T ss_pred -c-cCceEEcCCC---CCccHHHHHHHHHH
Confidence 2 4669999996 89999999999875
No 52
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.95 E-value=1.8e-26 Score=208.83 Aligned_cols=229 Identities=20% Similarity=0.248 Sum_probs=167.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchh------hhcccc-------CC-CCeEEEEccCCCC-----hH
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKA------KTTLSK-------DN-PSLQIVKADVTEG-----SA 126 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~------~~~~~~-------~~-~~~~~~~~Dl~~~-----~~ 126 (301)
+|||||||||||++++++|+++| ++|+++.|+.+.. .+.... .. .++.++.+|++++ .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 6899999987632 111100 01 5799999999863 24
Q ss_pred hHHHHhcCCCCEEEEccCCCCC-CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcch----hhc
Q 022216 127 KLSEAIGDDSEAVVCATGFQPG-WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFL 201 (301)
Q Consensus 127 ~~~~~~~~~~d~Vi~~Ag~~~~-~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~----~~~ 201 (301)
.+.+...+ +|+|||||+.... ..+...+++|+.++.++++++.+.+.++||++||.++|+.....+..+.. ...
T Consensus 81 ~~~~~~~~-~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~ 159 (367)
T TIGR01746 81 EWERLAEN-VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPP 159 (367)
T ss_pred HHHHHHhh-CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccccc
Confidence 56666677 9999999986442 23345567999999999999999888889999999998764322111111 111
Q ss_pred chhhHHHHHHHHHHHHHHH---cCCcEEEEecCcccCCCCCCce-----------------eeccccccccCCCCHHHHH
Q 022216 202 NVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGNI-----------------IMETEDTLYEGTISRDQVA 261 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~---~~i~~~~irpg~v~~~~~~~~~-----------------~~~~~~~~~~~~v~~~Dva 261 (301)
.+.+.|+.+|+.+|++++. .|++++++|||.++|+...+.. ..+........+++++|+|
T Consensus 160 ~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva 239 (367)
T TIGR01746 160 GLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVA 239 (367)
T ss_pred ccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHH
Confidence 2345799999999988754 4999999999999997433211 0111111234589999999
Q ss_pred HHHHHHhcCCCC--CCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 262 EVAVEALLHPES--SYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 262 ~~~~~~l~~~~~--~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++++.++..+.. .+++||+.++ +.++++|+++.+.+
T Consensus 240 ~ai~~~~~~~~~~~~~~~~~v~~~---~~~s~~e~~~~i~~ 277 (367)
T TIGR01746 240 RAIVALSSQPAASAGGPVFHVVNP---EPVSLDEFLEWLER 277 (367)
T ss_pred HHHHHHHhCCCcccCCceEEecCC---CCCCHHHHHHHHHH
Confidence 999888876653 2789999985 89999999998864
No 53
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.95 E-value=3e-26 Score=190.66 Aligned_cols=225 Identities=18% Similarity=0.222 Sum_probs=178.8
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc--cCCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
...+++|+||||.||||+|+|++|..+|++|++++.--.+...... ....+++.+.-|+..+ .+.+ +|.|+
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p------l~~e-vD~Iy 96 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP------LLKE-VDQIY 96 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH------HHHH-hhhhh
Confidence 4467999999999999999999999999999998765444332221 1456788888887762 6677 99999
Q ss_pred EccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchh----hcchhhHHHHHHH
Q 022216 141 CATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI----FLNVFGLTLIAKL 212 (301)
Q Consensus 141 ~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~----~~~~~~~y~~sK~ 212 (301)
|.|+...+ ..+..++.+|..++.+.+-.|++.+ +||++.||..|||+....|..+.|+ +..+...|...|.
T Consensus 97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr 175 (350)
T KOG1429|consen 97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKR 175 (350)
T ss_pred hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHH
Confidence 99986554 3567889999999999999999988 7999999999999977666555554 3456788999999
Q ss_pred HHHHHH----HHcCCcEEEEecCcccCCCC---CCc--------------eeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 213 QAEQYI----RKSGINYTIIRPGGLRNEPP---TGN--------------IIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 213 ~~e~~~----~~~~i~~~~irpg~v~~~~~---~~~--------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.+|.+. ++.|+.+.|.|+.+.|||.. .++ +.+.+.......|++++|+.+.++.+++++
T Consensus 176 ~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~ 255 (350)
T KOG1429|consen 176 VAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESD 255 (350)
T ss_pred HHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCC
Confidence 999876 45799999999999999942 222 223333334457999999999999999988
Q ss_pred CCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 272 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 272 ~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
.... +|++++ +.+|+.|+++.+.+
T Consensus 256 ~~~p--vNiGnp---~e~Tm~elAemv~~ 279 (350)
T KOG1429|consen 256 YRGP--VNIGNP---GEFTMLELAEMVKE 279 (350)
T ss_pred CcCC--cccCCc---cceeHHHHHHHHHH
Confidence 6544 999996 89999999998864
No 54
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.95 E-value=6.8e-26 Score=185.79 Aligned_cols=183 Identities=33% Similarity=0.467 Sum_probs=151.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCCCC
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG 148 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~ 148 (301)
|+|+||||++|+.++++|+++|++|+++.|++++.++ ..+++++.+|+.| .+.+.+++++ +|+||+++|....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d-~~~~~~al~~-~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDLFD-PDSVKAALKG-ADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCTTC-HHHHHHHHTT-SSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeeehh-hhhhhhhhhh-cchhhhhhhhhcc
Confidence 7999999999999999999999999999999988775 4899999999999 8999999999 9999999975433
Q ss_pred CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEEEE
Q 022216 149 WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTII 228 (301)
Q Consensus 149 ~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~i 228 (301)
+...+.++++++++.+++++|++|+..+|....... .......+..|...|..+|+++++.+++|+++
T Consensus 74 ---------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~iv 141 (183)
T PF13460_consen 74 ---------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLF---SDEDKPIFPEYARDKREAEEALRESGLNWTIV 141 (183)
T ss_dssp ---------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEE---EGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEE
T ss_pred ---------cccccccccccccccccccceeeeccccCCCCCccc---ccccccchhhhHHHHHHHHHHHHhcCCCEEEE
Confidence 278889999999999999999999999887544321 11112223677889999999999999999999
Q ss_pred ecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcC
Q 022216 229 RPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 229 rpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
||++++++.................+++++|+|++++.+|++
T Consensus 142 rp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 142 RPGWIYGNPSRSYRLIKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp EESEEEBTTSSSEEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred ECcEeEeCCCcceeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 999999987554433333333344789999999999988753
No 55
>PRK05865 hypothetical protein; Provisional
Probab=99.94 E-value=1.1e-25 Score=218.60 Aligned_cols=192 Identities=18% Similarity=0.263 Sum_probs=157.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~ 146 (301)
|+|+||||+|+||++++++|+++|++|++++|+.... ...++.++.+|++| .+.+.+++++ +|+|||||+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~~~v~~v~gDL~D-~~~l~~al~~-vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WPSSADFIAADIRD-ATAVESAMTG-ADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cccCceEEEeeCCC-HHHHHHHHhC-CCEEEECCCcc
Confidence 5799999999999999999999999999999875321 12368899999999 8899999998 99999999854
Q ss_pred CCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEE
Q 022216 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (301)
Q Consensus 147 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~ 226 (301)
.. .+++|+.++.++++++++.++++||++||.. |.++|+++++++++++
T Consensus 73 ~~-----~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------------K~aaE~ll~~~gl~~v 121 (854)
T PRK05865 73 GR-----NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------------QPRVEQMLADCGLEWV 121 (854)
T ss_pred cc-----hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------------HHHHHHHHHHcCCCEE
Confidence 32 4689999999999999999999999999952 7888998888999999
Q ss_pred EEecCcccCCCCCCce-------eec-cccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHh
Q 022216 227 IIRPGGLRNEPPTGNI-------IME-TEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSI 298 (301)
Q Consensus 227 ~irpg~v~~~~~~~~~-------~~~-~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i 298 (301)
++||+++||+.....+ ... +......+++|++|+|++++.++..+...+++||++++ +.++++|+++.+
T Consensus 122 ILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg---~~~Si~EIae~l 198 (854)
T PRK05865 122 AVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAP---GELTFRRIAAAL 198 (854)
T ss_pred EEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECC---CcccHHHHHHHH
Confidence 9999999998532211 111 11222236899999999998888665445679999996 889999999988
Q ss_pred hc
Q 022216 299 KQ 300 (301)
Q Consensus 299 ~~ 300 (301)
++
T Consensus 199 ~~ 200 (854)
T PRK05865 199 GR 200 (854)
T ss_pred hh
Confidence 64
No 56
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.94 E-value=7.7e-26 Score=197.40 Aligned_cols=220 Identities=20% Similarity=0.181 Sum_probs=160.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
.+|+||||||+|+||++++++|+++|++|++++|+.+.+++........+.++++|++| .+++.+.+.+ ++|+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999998877655443334568889999999 6666554432 3899
Q ss_pred EEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 139 Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
||||||.... +++...+++|+.++.++++++ ++.+.+++|++||...+... .....
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~~ 148 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF------------PMSGI 148 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC------------CCccH
Confidence 9999997542 245567899999998888886 45567899999998755322 12356
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec----cc---------cccccCC-CCHHHHHHHHH
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME----TE---------DTLYEGT-ISRDQVAEVAV 265 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~----~~---------~~~~~~~-v~~~Dva~~~~ 265 (301)
|+.+|.+.+.+.+ .+|+++++++||.+.+++........ .. ......+ .+++|+|++++
T Consensus 149 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~ 228 (275)
T PRK08263 149 YHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALL 228 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 8899998876542 36899999999999987653211000 00 0011235 78999999999
Q ss_pred HHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 266 EALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 266 ~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
.++..+......++... +..+++.++.+.+.+
T Consensus 229 ~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 260 (275)
T PRK08263 229 KLVDAENPPLRLFLGSG---VLDLAKADYERRLAT 260 (275)
T ss_pred HHHcCCCCCeEEEeCch---HHHHHHHHHHHHHHH
Confidence 99887765444333333 578889998887754
No 57
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.94 E-value=4.5e-25 Score=194.24 Aligned_cols=223 Identities=19% Similarity=0.228 Sum_probs=166.9
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhh--hc-cccCCCCeEEEEccCCCChHhHHHHhcCCCCEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAK--TT-LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~--~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 139 (301)
++.+++||||+||+|++++++|++++ .+|++++..+.... .. .......+..+.+|+.| ...+..++.+ + .|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~-~~~i~~a~~~-~-~V 79 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLD-ANSISNAFQG-A-VV 79 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhh-hhhhhhhccC-c-eE
Confidence 46799999999999999999999998 79999887764211 11 11135789999999999 8999999999 8 77
Q ss_pred EEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCC---cchhhcchhhHHHHHHH
Q 022216 140 VCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILN---PAYIFLNVFGLTLIAKL 212 (301)
Q Consensus 140 i~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~---~~~~~~~~~~~y~~sK~ 212 (301)
+|||+...+ .+.+..+++|+.||.+++++|++.+++++||+||..|.......... ..++ .+....|+.||.
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p-~~~~d~Y~~sKa 158 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYP-LKHIDPYGESKA 158 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCc-cccccccchHHH
Confidence 777764332 35778899999999999999999999999999999987544432211 2222 444578999999
Q ss_pred HHHHHHHHc----CCcEEEEecCcccCCCCCCce-------------eeccccccccCCCCHHHHHHHHHHHh-----cC
Q 022216 213 QAEQYIRKS----GINYTIIRPGGLRNEPPTGNI-------------IMETEDTLYEGTISRDQVAEVAVEAL-----LH 270 (301)
Q Consensus 213 ~~e~~~~~~----~i~~~~irpg~v~~~~~~~~~-------------~~~~~~~~~~~~v~~~Dva~~~~~~l-----~~ 270 (301)
.+|+++.+. ++..+++||..||||...... ........+.++++.+.+|.+++.+. ..
T Consensus 159 ~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~ 238 (361)
T KOG1430|consen 159 LAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKS 238 (361)
T ss_pred HHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcC
Confidence 999988653 378999999999999654321 11122245556888888888776543 34
Q ss_pred CCCCCcEEEeecCCCCCCcCHHHH
Q 022216 271 PESSYKVVEIISRVDAPKRSYEDL 294 (301)
Q Consensus 271 ~~~~~~~~~v~~~~~~~~~s~~e~ 294 (301)
+...|+.|.|.++ +++..-+.
T Consensus 239 ~~~~Gq~yfI~d~---~p~~~~~~ 259 (361)
T KOG1430|consen 239 PSVNGQFYFITDD---TPVRFFDF 259 (361)
T ss_pred CccCceEEEEeCC---CcchhhHH
Confidence 5678999999997 55444443
No 58
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.7e-25 Score=186.23 Aligned_cols=230 Identities=17% Similarity=0.164 Sum_probs=180.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCC--chhhhccc-cCCCCeEEEEccCCCChHhHHHHhcC-CCCEE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDL--DKAKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAV 139 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~--~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~V 139 (301)
.+.++||||.||||++.+..++..- ++.+.++.-. +.+..+.. ...++..++++|+.+ +..+...+.. ++|.|
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~-~~~~~~~~~~~~id~v 84 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIAD-ADLVLYLFETEEIDTV 84 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccc-hHHHHhhhccCchhhh
Confidence 4899999999999999999999873 4555543221 11222111 156899999999999 7777777765 79999
Q ss_pred EEccCCCC----CCCCCCceeeehHHHHHHHHHHHHc-CCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHH
Q 022216 140 VCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 214 (301)
Q Consensus 140 i~~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 214 (301)
+|.|+... ..+.......|+.++..|+++++.. ++++||++||..|||+..+.....+....+|.+.|+++|+++
T Consensus 85 ihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAa 164 (331)
T KOG0747|consen 85 IHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAA 164 (331)
T ss_pred hhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHH
Confidence 99998543 2355567789999999999999988 579999999999999998776554555667889999999999
Q ss_pred HHHHH----HcCCcEEEEecCcccCCCCCCc---------------eeeccccccccCCCCHHHHHHHHHHHhcCCCCCC
Q 022216 215 EQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSY 275 (301)
Q Consensus 215 e~~~~----~~~i~~~~irpg~v~~~~~~~~---------------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~ 275 (301)
|.+++ ++|++++++|-++||||..... ..+.+.......|++++|+++++..++.. ...+
T Consensus 165 E~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-g~~g 243 (331)
T KOG0747|consen 165 EMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-GELG 243 (331)
T ss_pred HHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-CCcc
Confidence 98775 5799999999999999965432 22333444556799999999999777777 4579
Q ss_pred cEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 276 KVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 276 ~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++|||+.. ..++..|+++.|.+
T Consensus 244 eIYNIgtd---~e~~~~~l~k~i~e 265 (331)
T KOG0747|consen 244 EIYNIGTD---DEMRVIDLAKDICE 265 (331)
T ss_pred ceeeccCc---chhhHHHHHHHHHH
Confidence 99999997 88999999887764
No 59
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.93 E-value=1.7e-25 Score=195.22 Aligned_cols=217 Identities=21% Similarity=0.271 Sum_probs=157.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCCEE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV 139 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~V 139 (301)
.|++|||||+|+||++++++|+++|++|+++.|+++..+.+......++.++.+|++| .+++.+.+.+ ++|+|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 3789999999999999999999999999999998876665543334578999999999 7666655431 38999
Q ss_pred EEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhhHH
Q 022216 140 VCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (301)
Q Consensus 140 i~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y 207 (301)
|||||.... ++++..+++|+.++.++++++ ++.+.++||++||..... + ....+.|
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~---------~~~~~~Y 148 (276)
T PRK06482 81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI---A---------YPGFSLY 148 (276)
T ss_pred EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc---C---------CCCCchh
Confidence 999996532 123456789999999999997 555678999999975321 1 1124679
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCce-----eeccc-----------cccccCCCCHHHHHHHH
Q 022216 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----IMETE-----------DTLYEGTISRDQVAEVA 264 (301)
Q Consensus 208 ~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~-----~~~~~-----------~~~~~~~v~~~Dva~~~ 264 (301)
+.+|.+.|.+++ .+|++++++|||.+.++...+.. ..... ...+.-+.+++|+++++
T Consensus 149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~ 228 (276)
T PRK06482 149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAM 228 (276)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 999999986653 25999999999998665432210 00000 00011236899999999
Q ss_pred HHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhh
Q 022216 265 VEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK 299 (301)
Q Consensus 265 ~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~ 299 (301)
+.++..+. .+..|+++++ +..++.|+++.+.
T Consensus 229 ~~~~~~~~-~~~~~~~g~~---~~~~~~~~~~~~~ 259 (276)
T PRK06482 229 IASADQTP-APRRLTLGSD---AYASIRAALSERL 259 (276)
T ss_pred HHHHcCCC-CCeEEecChH---HHHHHHHHHHHHH
Confidence 99887654 3556888886 7778887776654
No 60
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.93 E-value=4.8e-25 Score=200.29 Aligned_cols=217 Identities=19% Similarity=0.233 Sum_probs=175.0
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC-C
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD-D 135 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~-~ 135 (301)
.+++|+||||||+|-||+++++++++.+. ++++++|++.+......+ ....+.++.+|+.| .+.+..++.+ +
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD-~~~~~~~~~~~k 325 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD-RDRVERAMEGHK 325 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc-HHHHHHHHhcCC
Confidence 46899999999999999999999999974 788888887665432211 24688899999999 8999999998 8
Q ss_pred CCEEEEccCCCC----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHH
Q 022216 136 SEAVVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK 211 (301)
Q Consensus 136 ~d~Vi~~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK 211 (301)
+|+|||+|+..+ +.++.+.+++|+.||.|+++||.+++++++|++||--+ .+|.+.||.+|
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA---------------V~PtNvmGaTK 390 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA---------------VNPTNVMGATK 390 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc---------------cCCchHhhHHH
Confidence 999999999765 46788899999999999999999999999999999531 24568899999
Q ss_pred HHHHHHHHHc-------CCcEEEEecCcccCCCCC-----------CceeeccccccccCCCCHHHHHHHHHHHhcCCCC
Q 022216 212 LQAEQYIRKS-------GINYTIIRPGGLRNEPPT-----------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPES 273 (301)
Q Consensus 212 ~~~e~~~~~~-------~i~~~~irpg~v~~~~~~-----------~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~ 273 (301)
..+|+++... +-+++++|.|+|.|..++ +....-....+..-|++..|.++.++++.+...
T Consensus 391 r~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~- 469 (588)
T COG1086 391 RLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAK- 469 (588)
T ss_pred HHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcC-
Confidence 9999887532 367899999999986432 222222223333457899999999999888654
Q ss_pred CCcEEEeecCCCCCCcCHHHHHHHhh
Q 022216 274 SYKVVEIISRVDAPKRSYEDLFGSIK 299 (301)
Q Consensus 274 ~~~~~~v~~~~~~~~~s~~e~~~~i~ 299 (301)
+|.+|-+--| +++.+.|+++.|.
T Consensus 470 gGeifvldMG---epvkI~dLAk~mi 492 (588)
T COG1086 470 GGEIFVLDMG---EPVKIIDLAKAMI 492 (588)
T ss_pred CCcEEEEcCC---CCeEHHHHHHHHH
Confidence 6778877774 9999999999884
No 61
>PLN02778 3,5-epimerase/4-reductase
Probab=99.93 E-value=3.9e-25 Score=194.92 Aligned_cols=206 Identities=15% Similarity=0.138 Sum_probs=147.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG 144 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag 144 (301)
.|+||||||+||||+++++.|+++|++|+... .|+.| .+.+...+.+ ++|+|||+||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------~~~~~-~~~v~~~l~~~~~D~ViH~Aa 66 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------GRLEN-RASLEADIDAVKPTHVFNAAG 66 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------CccCC-HHHHHHHHHhcCCCEEEECCc
Confidence 57899999999999999999999999987421 34455 4556555553 4999999999
Q ss_pred CCCC-------CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCC------CCCCcchhhcchhhHHHHHH
Q 022216 145 FQPG-------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMG------QILNPAYIFLNVFGLTLIAK 211 (301)
Q Consensus 145 ~~~~-------~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~------~~~~~~~~~~~~~~~y~~sK 211 (301)
.... .++..++++|+.|+.+++++|++.+++ ++++||.++|+.... .+..+++.+..+.+.|+.+|
T Consensus 67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK 145 (298)
T PLN02778 67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTK 145 (298)
T ss_pred ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHH
Confidence 6532 234557889999999999999999885 566677778764321 12334444444457899999
Q ss_pred HHHHHHHHHcCCcEEEEecCcccCCCCCC--cee---ecccc--ccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCC
Q 022216 212 LQAEQYIRKSGINYTIIRPGGLRNEPPTG--NII---METED--TLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRV 284 (301)
Q Consensus 212 ~~~e~~~~~~~i~~~~irpg~v~~~~~~~--~~~---~~~~~--~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~ 284 (301)
.++|++++.+. +..++|++..+++.... .+. ..... ....++++++|++++++.++..+. .++||++++
T Consensus 146 ~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~--~g~yNigs~- 221 (298)
T PLN02778 146 AMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNL--TGIYNFTNP- 221 (298)
T ss_pred HHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCC--CCeEEeCCC-
Confidence 99999887654 56778887766543111 110 01111 111358899999999988886543 359999885
Q ss_pred CCCCcCHHHHHHHhhc
Q 022216 285 DAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 285 ~~~~~s~~e~~~~i~~ 300 (301)
+.+|+.|+++.+++
T Consensus 222 --~~iS~~el~~~i~~ 235 (298)
T PLN02778 222 --GVVSHNEILEMYRD 235 (298)
T ss_pred --CcccHHHHHHHHHH
Confidence 89999999998865
No 62
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.93 E-value=1.8e-24 Score=190.06 Aligned_cols=217 Identities=15% Similarity=0.078 Sum_probs=152.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCCCC
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG 148 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~ 148 (301)
||||||+|+||+++++.|+++|++|++++|++.+...... .. ..|+.. ..+.+.+.+ +|+|||+||....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~----~~~~~~--~~~~~~~~~-~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW---EG----YKPWAP--LAESEALEG-ADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc---ee----eecccc--cchhhhcCC-CCEEEECCCCCcc
Confidence 6899999999999999999999999999998776432211 11 112222 345567778 9999999986432
Q ss_pred -CCC-----CCceeeehHHHHHHHHHHHHcCCC--EEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHH--
Q 022216 149 -WDL-----FAPWKVDNFGTVNLVEACRKRGVN--RFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI-- 218 (301)
Q Consensus 149 -~~~-----~~~~~~N~~g~~~l~~a~~~~~~~--~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-- 218 (301)
.++ ..++++|+.++.++++++++.+++ ++|+.|+..+|+.....+..++.++ .+...|...+...|+.+
T Consensus 71 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~-~~~~~~~~~~~~~e~~~~~ 149 (292)
T TIGR01777 71 DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSP-AGDDFLAELCRDWEEAAQA 149 (292)
T ss_pred cccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCC-CCCChHHHHHHHHHHHhhh
Confidence 222 346789999999999999998863 5666777778886544444443311 22233444555555443
Q ss_pred -HHcCCcEEEEecCcccCCCCCC--c----ee-----eccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCC
Q 022216 219 -RKSGINYTIIRPGGLRNEPPTG--N----II-----METEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDA 286 (301)
Q Consensus 219 -~~~~i~~~~irpg~v~~~~~~~--~----~~-----~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~ 286 (301)
++.+++++++||+.++|+.... . .. ..+....+.++++++|+|+++..++..+.. .++||+.++
T Consensus 150 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~~--- 225 (292)
T TIGR01777 150 AEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVNATAP--- 225 (292)
T ss_pred chhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceEecCC---
Confidence 3468999999999999985310 0 00 011223345789999999999999887653 468999985
Q ss_pred CCcCHHHHHHHhhc
Q 022216 287 PKRSYEDLFGSIKQ 300 (301)
Q Consensus 287 ~~~s~~e~~~~i~~ 300 (301)
+.+++.|+++.|++
T Consensus 226 ~~~s~~di~~~i~~ 239 (292)
T TIGR01777 226 EPVRNKEFAKALAR 239 (292)
T ss_pred CccCHHHHHHHHHH
Confidence 89999999999875
No 63
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.93 E-value=8.1e-26 Score=193.60 Aligned_cols=212 Identities=21% Similarity=0.280 Sum_probs=150.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhccccC-----CCCeE----EEEccCCCChHhHHHHhcC-CCC
Q 022216 69 IFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKD-----NPSLQ----IVKADVTEGSAKLSEAIGD-DSE 137 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~~-----~~~~~----~~~~Dl~~~~~~~~~~~~~-~~d 137 (301)
||||||+|.||++++++|++.+ .++++++|++.++..+..+. ..++. .+.+|++| .+.+..++.. ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd-~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD-KERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH-HHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC-HHHHHHHHhhcCCC
Confidence 7999999999999999999998 57999999987765433221 23343 45899999 8999999994 599
Q ss_pred EEEEccCCCC----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHH
Q 022216 138 AVVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ 213 (301)
Q Consensus 138 ~Vi~~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~ 213 (301)
+|||+|+..+ +..+.+.+++|+.||.|++++|.+++++++|++||--+ .+|.+.||+||..
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA---------------v~PtnvmGatKrl 144 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA---------------VNPTNVMGATKRL 144 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC---------------SS--SHHHHHHHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc---------------CCCCcHHHHHHHH
Confidence 9999999876 46778889999999999999999999999999999632 2356889999999
Q ss_pred HHHHHHHc-------CCcEEEEecCcccCCCCC-----------CceeeccccccccCCCCHHHHHHHHHHHhcCCCCCC
Q 022216 214 AEQYIRKS-------GINYTIIRPGGLRNEPPT-----------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSY 275 (301)
Q Consensus 214 ~e~~~~~~-------~i~~~~irpg~v~~~~~~-----------~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~ 275 (301)
+|+++... +.++.++|.|+|.+-.++ +..+.-......+-|+++++.++.++.++.... ++
T Consensus 145 aE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~-~g 223 (293)
T PF02719_consen 145 AEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAK-GG 223 (293)
T ss_dssp HHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---TT
T ss_pred HHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCC-CC
Confidence 99988642 468899999999985322 222222223333457899999999998887654 57
Q ss_pred cEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 276 KVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 276 ~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++|-.--+ +++.+.|+++.+.+
T Consensus 224 eifvl~mg---~~v~I~dlA~~~i~ 245 (293)
T PF02719_consen 224 EIFVLDMG---EPVKILDLAEAMIE 245 (293)
T ss_dssp EEEEE------TCEECCCHHHHHHH
T ss_pred cEEEecCC---CCcCHHHHHHHHHh
Confidence 77777774 89999999988753
No 64
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.93 E-value=5.5e-24 Score=182.77 Aligned_cols=212 Identities=15% Similarity=0.136 Sum_probs=152.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhc---cccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
+++|++|||||+||||++++++|+++|++|+++.|+... .+.+ +.....++.++.+|++| .+++.+.+..
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 467999999999999999999999999999999987542 2221 11123567899999999 7666655531
Q ss_pred -CCCEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHHHH
Q 022216 135 -DSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~ 209 (301)
++|+||||||... ..++...+++|+.++.++++++.+. ..++||++||........ .+. ...+..|+.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~---~~~~~~Y~~ 155 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKT---MPEYEPVAR 155 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccC---CccccHHHH
Confidence 3999999998543 2346678899999999999999764 235899999964321110 011 112567999
Q ss_pred HHHHHHHHHHH-------cCCcEEEEecCcccCCCCCCcee--ecc----ccccccCCCCHHHHHHHHHHHhcCCCCCCc
Q 022216 210 AKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII--MET----EDTLYEGTISRDQVAEVAVEALLHPESSYK 276 (301)
Q Consensus 210 sK~~~e~~~~~-------~~i~~~~irpg~v~~~~~~~~~~--~~~----~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~ 276 (301)
+|.++|.+++. .++++++|+||.+.++....... ... .......+++++|+|++++.++.++...++
T Consensus 156 sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~ 235 (248)
T PRK07806 156 SKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPSGH 235 (248)
T ss_pred HHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccCcc
Confidence 99999987643 68999999999888764322110 000 001113578999999999988887767889
Q ss_pred EEEeecC
Q 022216 277 VVEIISR 283 (301)
Q Consensus 277 ~~~v~~~ 283 (301)
++++.++
T Consensus 236 ~~~i~~~ 242 (248)
T PRK07806 236 IEYVGGA 242 (248)
T ss_pred EEEecCc
Confidence 9999885
No 65
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.93 E-value=7.5e-25 Score=185.58 Aligned_cols=195 Identities=20% Similarity=0.238 Sum_probs=146.2
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc----CCCCeEEEEccCCCChHhHHHHhc---C--
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIG---D-- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~---~-- 134 (301)
+.+++++|||||+|||.++|++|+++|++|+++.|+.++++++..+ .+..++++.+|+++ .+++.+... +
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhcC
Confidence 3578999999999999999999999999999999999988876543 34567899999999 655555443 1
Q ss_pred -CCCEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
.+|++|||||+.... +...++++|+.++..|.++. .+.+.++||+++|.+.|-. .
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p------------~ 150 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP------------T 150 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC------------C
Confidence 499999999975432 23467899999988877776 5566789999999974421 1
Q ss_pred chhhHHHHHHHHHHHH-------HHHcCCcEEEEecCcccCCCCCC-ceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 202 NVFGLTLIAKLQAEQY-------IRKSGINYTIIRPGGLRNEPPTG-NIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~-------~~~~~i~~~~irpg~v~~~~~~~-~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
...+.|+.||...-.+ ++..|++|+.+.||.+.++.... ....... .....+++++|+|+..+..+...+
T Consensus 151 p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~-~~~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 151 PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLL-SPGELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccc-cchhhccCHHHHHHHHHHHHhcCC
Confidence 2246677777766432 34579999999999999987641 1111111 111237899999999999998754
No 66
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1.8e-24 Score=188.71 Aligned_cols=221 Identities=20% Similarity=0.222 Sum_probs=159.9
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---C--CCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---D--NPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
++++|++|||||+|+||+++++.|+++|++|+++.|+.++.+..... . ..++.++.+|++| .+++.+.+..
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~ 82 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATA 82 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999987654433211 1 2468899999999 6666665542
Q ss_pred ---CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcch
Q 022216 135 ---DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAY 198 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~ 198 (301)
++|+||||||.... +++..++++|+.++.++++++.+ .+.++||++||...+...
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 153 (276)
T PRK05875 83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH--------- 153 (276)
T ss_pred HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC---------
Confidence 39999999985321 13456788999999999887743 344699999998754221
Q ss_pred hhcchhhHHHHHHHHHHHHHHH-------cCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHH
Q 022216 199 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~ 265 (301)
.+.+.|+.+|.+.|.+++. .++++++|+||.+.+++........ ........+.+++|+|++++
T Consensus 154 ---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 230 (276)
T PRK05875 154 ---RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAM 230 (276)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHH
Confidence 1246789999999987652 4799999999999887643221100 01111234568999999998
Q ss_pred HHhcCCCC--CCcEEEeecCCCCCCc----CHHHHHHHhh
Q 022216 266 EALLHPES--SYKVVEIISRVDAPKR----SYEDLFGSIK 299 (301)
Q Consensus 266 ~~l~~~~~--~~~~~~v~~~~~~~~~----s~~e~~~~i~ 299 (301)
.++..+.. .++++++.++ ..+ +..|+++.+.
T Consensus 231 ~l~~~~~~~~~g~~~~~~~g---~~~~~~~~~~~~~~~~~ 267 (276)
T PRK05875 231 FLLSDAASWITGQVINVDGG---HMLRRGPDFSSMLEPVF 267 (276)
T ss_pred HHcCchhcCcCCCEEEECCC---eeccCCccHHHHHHHHh
Confidence 87765542 3788888875 444 8888887664
No 67
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.92 E-value=5.4e-25 Score=190.87 Aligned_cols=205 Identities=17% Similarity=0.183 Sum_probs=142.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc----CCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
++++|++|||||+|+||++++++|+++|++|++++|+.+++++.... .+.++.++.+|++| .+++.+.+..
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~ 83 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNI 83 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhh
Confidence 46789999999999999999999999999999999987765543321 23578899999999 6666655531
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|++|||||.... ++|+..+++|+.+.+.+++++ ++.+.++||++||...+.. .
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~---~--------- 151 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP---I--------- 151 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC---C---------
Confidence 39999999996431 356678899999988877776 4455679999999864321 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee---------------eccccccccCCCCHHH
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---------------METEDTLYEGTISRDQ 259 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~---------------~~~~~~~~~~~v~~~D 259 (301)
..+..|..+|.+.+.+.+ .+||+++.|.||.+.+++...... ..........+..++|
T Consensus 152 ~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d 231 (263)
T PRK08339 152 PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEE 231 (263)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHH
Confidence 113556777877765443 368999999999999875321100 0000111223568999
Q ss_pred HHHHHHHHhcCCCCC---CcEEEee
Q 022216 260 VAEVAVEALLHPESS---YKVVEII 281 (301)
Q Consensus 260 va~~~~~~l~~~~~~---~~~~~v~ 281 (301)
+|++++.++ ++... ++++.+.
T Consensus 232 va~~v~fL~-s~~~~~itG~~~~vd 255 (263)
T PRK08339 232 IGYLVAFLA-SDLGSYINGAMIPVD 255 (263)
T ss_pred HHHHHHHHh-cchhcCccCceEEEC
Confidence 999996555 44333 4444443
No 68
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.92 E-value=1.4e-24 Score=187.89 Aligned_cols=207 Identities=19% Similarity=0.143 Sum_probs=145.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|++|||||+|+||+++++.|+++|++|++++|++++.++... ....++.++++|++| .+++.+++.+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999998865544322 133467889999999 7666655432
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHH----HHHHHHH-HHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGT----VNLVEAC-RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~----~~l~~a~-~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||.... ++++..+++|+.++ ..+++++ ++.+.++||++||...+...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~------------ 151 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS------------ 151 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC------------
Confidence 39999999996432 23455678999994 4455555 56667899999997543211
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-----c-----------cccccccCCCCHH
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----E-----------TEDTLYEGTISRD 258 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-----~-----------~~~~~~~~~v~~~ 258 (301)
.....|+.+|.+.+.+.+ ..++++++|+||.++++.....+.. . ........+++++
T Consensus 152 ~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (262)
T PRK13394 152 PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVE 231 (262)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHH
Confidence 123456777777765543 3589999999999999854322100 0 0011224589999
Q ss_pred HHHHHHHHHhcCCC--CCCcEEEeecC
Q 022216 259 QVAEVAVEALLHPE--SSYKVVEIISR 283 (301)
Q Consensus 259 Dva~~~~~~l~~~~--~~~~~~~v~~~ 283 (301)
|++++++.++..+. ..++.|++.++
T Consensus 232 dva~a~~~l~~~~~~~~~g~~~~~~~g 258 (262)
T PRK13394 232 DVAQTVLFLSSFPSAALTGQSFVVSHG 258 (262)
T ss_pred HHHHHHHHHcCccccCCcCCEEeeCCc
Confidence 99999987776543 23677777763
No 69
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.92 E-value=3e-24 Score=187.59 Aligned_cols=196 Identities=18% Similarity=0.204 Sum_probs=144.7
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
.+|++|||||+|+||++++++|+++|++|++++|++++...+......++..+.+|++| .+++.+.+.+ ++|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999999999999999877665544334578899999999 7766665542 3899
Q ss_pred EEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 139 Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
||||||.... +++..++++|+.|+.++++++. +.+.++||++||.+.+... .+...
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~------------~~~~~ 149 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM------------PGIGY 149 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC------------CCcch
Confidence 9999997432 1244568999999999999963 4456799999998644221 12467
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-----ccc------------cccccCCCCHHHHHH
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETE------------DTLYEGTISRDQVAE 262 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-----~~~------------~~~~~~~v~~~Dva~ 262 (301)
|+.+|.+.|.+.+ .+|+++++|+||.+.+++....... ... ......+.+++|+|+
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 229 (277)
T PRK06180 150 YCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQ 229 (277)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHH
Confidence 8899998886553 2599999999999988753221100 000 001123568999999
Q ss_pred HHHHHhcCCCC
Q 022216 263 VAVEALLHPES 273 (301)
Q Consensus 263 ~~~~~l~~~~~ 273 (301)
+++.++..+..
T Consensus 230 ~~~~~l~~~~~ 240 (277)
T PRK06180 230 AILAAVESDEP 240 (277)
T ss_pred HHHHHHcCCCC
Confidence 99998887653
No 70
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.92 E-value=2.5e-24 Score=185.41 Aligned_cols=194 Identities=14% Similarity=0.125 Sum_probs=138.8
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhccccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
.+++|++|||||+++||++++++|+++|++|++++|+... ..+.......++.++.+|++| .+++.+++.. +
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999988876432 222222234578899999999 7666655532 4
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEecccccccccCCCCCCcchhhcc
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
+|++|||||.... ++|+.++++|+.+++.+++++.+ .+ .++||++||...+....
T Consensus 84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------ 151 (251)
T PRK12481 84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI------------ 151 (251)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC------------
Confidence 9999999996432 35777899999999999888742 33 36999999987553221
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHHhc
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
....|..+|.+.+.+.+ .+|++++.|+||++.+++........ ........+..++|+|++++.++.
T Consensus 152 ~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s 231 (251)
T PRK12481 152 RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSS 231 (251)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 12467888888876553 46999999999999988643211000 001112346789999999965553
No 71
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.92 E-value=2.9e-24 Score=185.34 Aligned_cols=207 Identities=16% Similarity=0.079 Sum_probs=146.4
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|++|||||+|+||++++++|+++|++|++++|++++.++...+ ...++.++.+|++| .+++.+++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999998765543321 34678899999999 7776665542
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||.... +++...+++|+.++.++++.+ ++.+.++||++||...+... .
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~ 148 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS------------A 148 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC------------C
Confidence 39999999986432 123446789999966666655 45567899999998654321 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-------c---------cccccccCCCCHHH
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-------E---------TEDTLYEGTISRDQ 259 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-------~---------~~~~~~~~~v~~~D 259 (301)
..+.|..+|.+.+.+.+ ..++++++++||.+.++...+.... . ........+++++|
T Consensus 149 ~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 228 (258)
T PRK12429 149 GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE 228 (258)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence 23456666766664432 3689999999999999764322110 0 00112235899999
Q ss_pred HHHHHHHHhcCCC--CCCcEEEeecC
Q 022216 260 VAEVAVEALLHPE--SSYKVVEIISR 283 (301)
Q Consensus 260 va~~~~~~l~~~~--~~~~~~~v~~~ 283 (301)
+|++++.++.... ..++.|++.++
T Consensus 229 ~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 229 IADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred HHHHHHHHcCccccCccCCeEEeCCC
Confidence 9999987776543 34677877763
No 72
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.92 E-value=1.3e-24 Score=187.79 Aligned_cols=207 Identities=16% Similarity=0.131 Sum_probs=149.7
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
+.+|++|||||+|+||+++++.|+++|++|++++|+.+..++.......++.++.+|++| .+++.+++.. ++|
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 457899999999999999999999999999999999877665443334568899999999 6666555542 399
Q ss_pred EEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc----C-CCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR----G-VNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 138 ~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
+||||||.... ++++.++++|+.++.++++++.+. + .++||++||..... + ..+.
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~---~---------~~~~ 150 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR---G---------EALV 150 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC---C---------CCCC
Confidence 99999986431 245667899999999999998532 1 25899999974211 1 1234
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCce------e-e--------ccccccccCCCCHHHHHH
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI------I-M--------ETEDTLYEGTISRDQVAE 262 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~------~-~--------~~~~~~~~~~v~~~Dva~ 262 (301)
..|+.+|.+.+.+.+ .+|+++++|+||+++|++..... . . .........+.+++|+|+
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 230 (257)
T PRK07067 151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG 230 (257)
T ss_pred chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence 678899998876653 36899999999999998533210 0 0 000112345779999999
Q ss_pred HHHHHhcCCC--CCCcEEEeecC
Q 022216 263 VAVEALLHPE--SSYKVVEIISR 283 (301)
Q Consensus 263 ~~~~~l~~~~--~~~~~~~v~~~ 283 (301)
+++.++..+. ..++++++.++
T Consensus 231 ~~~~l~s~~~~~~~g~~~~v~gg 253 (257)
T PRK07067 231 MALFLASADADYIVAQTYNVDGG 253 (257)
T ss_pred HHHHHhCcccccccCcEEeecCC
Confidence 9976665432 34677877664
No 73
>PRK05717 oxidoreductase; Validated
Probab=99.92 E-value=3.8e-24 Score=184.63 Aligned_cols=208 Identities=14% Similarity=0.134 Sum_probs=146.9
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
.++++|+++||||+|+||++++++|+++|++|++++|+..+..+.......++.++.+|++| .+++.+++.. +
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence 56789999999999999999999999999999999888765554333234568899999999 6665443322 3
Q ss_pred CCEEEEccCCCCC----------CCCCCceeeehHHHHHHHHHHHH---cCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 136 SEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
+|+||||||.... ++|+..+++|+.+++++++++.+ ...++||++||...+... .
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~------------~ 152 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE------------P 152 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC------------C
Confidence 8999999996532 13456789999999999999953 223689999998643211 1
Q ss_pred hhhHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCceeec-----cccccccCCCCHHHHHHHHHHHhcCC
Q 022216 203 VFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~~~~~-----~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
....|+.+|.+.+.+.+. .++++++|+||++.+++........ ..........+++|+|.++..++...
T Consensus 153 ~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 232 (255)
T PRK05717 153 DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ 232 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 135689999999876642 3599999999999998643221100 00111234568999999996666432
Q ss_pred C--CCCcEEEeec
Q 022216 272 E--SSYKVVEIIS 282 (301)
Q Consensus 272 ~--~~~~~~~v~~ 282 (301)
. ..++.+.+.+
T Consensus 233 ~~~~~g~~~~~~g 245 (255)
T PRK05717 233 AGFVTGQEFVVDG 245 (255)
T ss_pred hcCccCcEEEECC
Confidence 2 2355666643
No 74
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.92 E-value=1.2e-24 Score=187.76 Aligned_cols=208 Identities=17% Similarity=0.131 Sum_probs=149.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++|++|||||+|+||++++++|+++|++|++++|++++.++... ..+.++.++.+|++| .+++.+++.+
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999999998766544321 123468889999999 7666666542
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||.... ++++.++++|+.++.++++++.+ .+.++||++||...+.. .
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------------~ 153 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA------------R 153 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC------------C
Confidence 39999999996532 23455678999999999998854 35679999999753211 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHHh
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
..+..|+.+|.+.+.+.+ .+|+++++|+||.+.++......... ........+..++|+|++++.++
T Consensus 154 ~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 233 (255)
T PRK07523 154 PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLA 233 (255)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 224678889988886553 46899999999999998643211100 01112234678999999997776
Q ss_pred cCCC--CCCcEEEeecC
Q 022216 269 LHPE--SSYKVVEIISR 283 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~~ 283 (301)
..+. ..++++++.++
T Consensus 234 ~~~~~~~~G~~i~~~gg 250 (255)
T PRK07523 234 SDASSFVNGHVLYVDGG 250 (255)
T ss_pred CchhcCccCcEEEECCC
Confidence 5432 24567776653
No 75
>PRK06128 oxidoreductase; Provisional
Probab=99.92 E-value=4.5e-24 Score=188.56 Aligned_cols=208 Identities=13% Similarity=0.107 Sum_probs=146.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch--hhh---ccccCCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~--~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
.+++|++|||||+|+||+++++.|+++|++|++..++.+. .++ .......++.++.+|++| .+++.+++..
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 130 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVK 130 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHH
Confidence 4678999999999999999999999999999987765432 111 121234568889999999 6666555432
Q ss_pred ---CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 ---DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... ++|+.++++|+.+++++++++.+. ..++||++||...|....
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 200 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP---------- 200 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC----------
Confidence 39999999996421 245678899999999999999653 236999999997664221
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee------eccccccccCCCCHHHHHHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII------METEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~------~~~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
.+..|+.+|.+.+.+.+ ..|+++++|+||++.|++...... ..........+.+++|+|.+++.+
T Consensus 201 --~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l 278 (300)
T PRK06128 201 --TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLL 278 (300)
T ss_pred --CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 23568899998886653 369999999999999987432110 000111223456899999999766
Q ss_pred hcCCC--CCCcEEEeecC
Q 022216 268 LLHPE--SSYKVVEIISR 283 (301)
Q Consensus 268 l~~~~--~~~~~~~v~~~ 283 (301)
+.... ..++++++.++
T Consensus 279 ~s~~~~~~~G~~~~v~gg 296 (300)
T PRK06128 279 ASQESSYVTGEVFGVTGG 296 (300)
T ss_pred hCccccCccCcEEeeCCC
Confidence 54332 24566766653
No 76
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.92 E-value=1.2e-24 Score=171.71 Aligned_cols=213 Identities=18% Similarity=0.188 Sum_probs=156.3
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCC--CCeEEEEccCCCChHhHHHHhcC------
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
.+..|.++||||+++||+++++.|++.|++|.+.+++....++.....+ .+-..+.+|+++ .+.+...+++
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~-a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSK-AHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCc-HHHHHHHHHHHHHhcC
Confidence 4567899999999999999999999999999999988776555433222 356788999999 5554443322
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc----C--CCEEEEecccccccccCCCCCCcchhh
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR----G--VNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~----~--~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
.+++||||||+..+ ++|...+.+|+.|++.+.|++.+. + ..+||++||+-- ..++..+..|..
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVG---kiGN~GQtnYAA 166 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVG---KIGNFGQTNYAA 166 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhc---ccccccchhhhh
Confidence 49999999998764 578899999999999999998543 2 239999999862 334444566766
Q ss_pred cchhhHHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCcee---eccccccccC-CCCHHHHHHHHHHHhcCCCCCCc
Q 022216 201 LNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNII---METEDTLYEG-TISRDQVAEVAVEALLHPESSYK 276 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~~~~i~~~~irpg~v~~~~~~~~~~---~~~~~~~~~~-~v~~~Dva~~~~~~l~~~~~~~~ 276 (301)
.+. +..+.+|.++.++. +.+||++.+.||++.+|+...... .......+.+ +-..+|+|+.+ .+|.++.+.|.
T Consensus 167 sK~-GvIgftktaArEla-~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V-~fLAS~~ssYi 243 (256)
T KOG1200|consen 167 SKG-GVIGFTKTAARELA-RKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLV-LFLASDASSYI 243 (256)
T ss_pred hcC-ceeeeeHHHHHHHh-hcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHH-HHHhccccccc
Confidence 664 55678888887755 589999999999999998654321 1111222222 44789999998 67778876654
Q ss_pred ---EEEeec
Q 022216 277 ---VVEIIS 282 (301)
Q Consensus 277 ---~~~v~~ 282 (301)
++++.+
T Consensus 244 TG~t~evtG 252 (256)
T KOG1200|consen 244 TGTTLEVTG 252 (256)
T ss_pred cceeEEEec
Confidence 455554
No 77
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.92 E-value=3.7e-24 Score=185.45 Aligned_cols=206 Identities=18% Similarity=0.122 Sum_probs=146.1
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
+++|+++||||+|+||++++++|+++|++|++++|+.++.++.......++.++.+|++| .+++.+.+.. ++|
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999999876665543334578899999999 6666555432 399
Q ss_pred EEEEccCCCCC-------CCCCCceeeehHHHHHHHHHHHH---cCCCEEEEecccccccccCCCCCCcchhhcchhhHH
Q 022216 138 AVVCATGFQPG-------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (301)
Q Consensus 138 ~Vi~~Ag~~~~-------~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y 207 (301)
+||||||.... ++|...+++|+.+++++++++.. .+.++||++||....... .....|
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~~~~Y 150 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ------------TGRWLY 150 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC------------CCCchh
Confidence 99999996432 24556789999999999988743 334799999998643211 113568
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee--------ccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--------ETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 208 ~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~--------~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
..+|.+.+.+.+ ..|++++.|+||++.+++....... .........+..++|+|++++.++..+.
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~ 230 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAA 230 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccc
Confidence 888888876554 2589999999999998864321100 0000112234679999999976664332
Q ss_pred --CCCcEEEeec
Q 022216 273 --SSYKVVEIIS 282 (301)
Q Consensus 273 --~~~~~~~v~~ 282 (301)
..++++.+.+
T Consensus 231 ~~~tG~~i~vdg 242 (261)
T PRK08265 231 SFVTGADYAVDG 242 (261)
T ss_pred cCccCcEEEECC
Confidence 3455555544
No 78
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.92 E-value=4.6e-24 Score=184.59 Aligned_cols=194 Identities=21% Similarity=0.129 Sum_probs=140.4
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
.+++|++|||||+|+||++++++|+++|++|++++|+.+..++.... ...++.++.+|++| .+++.+.+..
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~ 82 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEE 82 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999987765543321 23568899999999 6666655531
Q ss_pred ---CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchh
Q 022216 135 ---DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
++|+||||||.... ++|+..+++|+.+++++++++. +.+.++||++||...+...
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 152 (260)
T PRK07063 83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII---------- 152 (260)
T ss_pred HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC----------
Confidence 39999999996421 3466778999999999999874 3445799999998643211
Q ss_pred hcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc----------ccccccCCCCHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET----------EDTLYEGTISRDQVAE 262 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~----------~~~~~~~~v~~~Dva~ 262 (301)
.....|..+|.+.+.+.+ ..||+++.|+||++.+++......... .......+..++|+|+
T Consensus 153 --~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~ 230 (260)
T PRK07063 153 --PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAM 230 (260)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 123568888988876653 358999999999999886432110000 0011223568999999
Q ss_pred HHHHHhc
Q 022216 263 VAVEALL 269 (301)
Q Consensus 263 ~~~~~l~ 269 (301)
+++.++.
T Consensus 231 ~~~fl~s 237 (260)
T PRK07063 231 TAVFLAS 237 (260)
T ss_pred HHHHHcC
Confidence 9966554
No 79
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1.2e-23 Score=183.53 Aligned_cols=195 Identities=16% Similarity=0.206 Sum_probs=142.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|++|||||+|+||++++++|+++|++|++.+|+.+.+++... ....++.++.+|++| .+++.+++..
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 568999999999999999999999999999999998766554332 123468889999999 7666655432
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcC-CCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||.... ++++..+++|+.|+.++++++. +.+ .++||++||...+...
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~------------ 150 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN------------ 150 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC------------
Confidence 38999999996432 2345667999999999999874 333 4789999998754321
Q ss_pred chhhHHHHHHHHHHHHH-------HHcCCcEEEEecCcccCCCCCCceee-------------ccccccccCCCCHHHHH
Q 022216 202 NVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIM-------------ETEDTLYEGTISRDQVA 261 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~-------~~~~i~~~~irpg~v~~~~~~~~~~~-------------~~~~~~~~~~v~~~Dva 261 (301)
.+.+.|+.+|.+.+.+. ...|+++++|+||.+.+++..+.... .........+++++|+|
T Consensus 151 ~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 230 (275)
T PRK05876 151 AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIA 230 (275)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHH
Confidence 23467888898754332 23689999999999999864332100 00001123468999999
Q ss_pred HHHHHHhcCC
Q 022216 262 EVAVEALLHP 271 (301)
Q Consensus 262 ~~~~~~l~~~ 271 (301)
+.++.++..+
T Consensus 231 ~~~~~ai~~~ 240 (275)
T PRK05876 231 QLTADAILAN 240 (275)
T ss_pred HHHHHHHHcC
Confidence 9999999765
No 80
>PLN02253 xanthoxin dehydrogenase
Probab=99.92 E-value=6.9e-24 Score=185.51 Aligned_cols=207 Identities=16% Similarity=0.104 Sum_probs=144.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
.+++|++|||||+|+||++++++|+++|++|++++|+.+..++.... ...++.++++|++| .+++.+++..
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFG 93 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhC
Confidence 45689999999999999999999999999999999886654433221 23468899999999 7777666542
Q ss_pred CCCEEEEccCCCCC----------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 DSEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... ++++.++++|+.|++++++++.+ .+.+++|++||....- +.
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~---~~-------- 162 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI---GG-------- 162 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc---cC--------
Confidence 49999999996421 23456789999999999988753 3346899999975321 11
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec--------------c-ccccccCCCCHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME--------------T-EDTLYEGTISRD 258 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~--------------~-~~~~~~~~v~~~ 258 (301)
.....|+.+|.+.|.+.+ ..|++++.|+||.+.+++........ . ........++++
T Consensus 163 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (280)
T PLN02253 163 -LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVD 241 (280)
T ss_pred -CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHH
Confidence 112468899999987664 25899999999999987532111000 0 001111247899
Q ss_pred HHHHHHHHHhcCCC--CCCcEEEeec
Q 022216 259 QVAEVAVEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 259 Dva~~~~~~l~~~~--~~~~~~~v~~ 282 (301)
|+|++++.++..+. ..++++.+.+
T Consensus 242 dva~~~~~l~s~~~~~i~G~~i~vdg 267 (280)
T PLN02253 242 DVANAVLFLASDEARYISGLNLMIDG 267 (280)
T ss_pred HHHHHHHhhcCcccccccCcEEEECC
Confidence 99999966654322 2455666654
No 81
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.92 E-value=4.1e-23 Score=181.16 Aligned_cols=195 Identities=21% Similarity=0.284 Sum_probs=149.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhc-----CC-CCEEEE
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-----DD-SEAVVC 141 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~-~d~Vi~ 141 (301)
+||||||||+||++++++|+++|++|+++.|++++.. ..+++.+.+|++| .+++.+++. .+ +|.|+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------~~~~~~~~~d~~d-~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------GPNEKHVKFDWLD-EDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------CCCCccccccCCC-HHHHHHHHhcccCcCCceeEEEE
Confidence 4899999999999999999999999999999987542 2467778899999 899999884 23 899999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS 221 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~ 221 (301)
+++.... ......+++++|++.|++|||++||..++.. . ..+...|+++++.
T Consensus 74 ~~~~~~~---------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~---~----------------~~~~~~~~~l~~~ 125 (285)
T TIGR03649 74 VAPPIPD---------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG---G----------------PAMGQVHAHLDSL 125 (285)
T ss_pred eCCCCCC---------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC---C----------------chHHHHHHHHHhc
Confidence 9864321 1345678999999999999999998653211 0 0123456677775
Q ss_pred -CCcEEEEecCcccCCCCCC---------ceeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcCH
Q 022216 222 -GINYTIIRPGGLRNEPPTG---------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSY 291 (301)
Q Consensus 222 -~i~~~~irpg~v~~~~~~~---------~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~ 291 (301)
|++++++||++++++.... ............++++++|+|+++..+|..+...+++|++.++ +.+|+
T Consensus 126 ~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~---~~~s~ 202 (285)
T TIGR03649 126 GGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGP---ELLTY 202 (285)
T ss_pred cCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCC---ccCCH
Confidence 9999999999888653211 1111122233356999999999999999887666788999885 99999
Q ss_pred HHHHHHhhc
Q 022216 292 EDLFGSIKQ 300 (301)
Q Consensus 292 ~e~~~~i~~ 300 (301)
+|+++.+++
T Consensus 203 ~eia~~l~~ 211 (285)
T TIGR03649 203 DDVAEILSR 211 (285)
T ss_pred HHHHHHHHH
Confidence 999999875
No 82
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.91 E-value=6.7e-24 Score=184.92 Aligned_cols=191 Identities=18% Similarity=0.171 Sum_probs=141.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
+++++++|||||+|+||++++++|+++|++|++++|++++.++..... ..+.++.+|++| .+++.+.+.. ++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-GLVVGGPLDVTD-PASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 356899999999999999999999999999999999887765543211 257889999999 6665444322 39
Q ss_pred CEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|++|||||..... ++..++++|+.|+.++++++ ++.+.++||++||...+... ...
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~ 147 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV------------PGM 147 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC------------CCC
Confidence 9999999975421 24456789999998888776 45567899999998643211 123
Q ss_pred hHHHHHHHHHHHHH-------HHcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 205 GLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 205 ~~y~~sK~~~e~~~-------~~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
..|..+|.+.+.+. +..|+++++|+||++.+++..+.. ......+++++|+|+.++.++.++.
T Consensus 148 ~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 148 ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG-----GAKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc-----cccCCCCCCHHHHHHHHHHHHhCCC
Confidence 56778887766443 346999999999999887644321 1112247899999999999998764
No 83
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.91 E-value=1.1e-23 Score=198.81 Aligned_cols=235 Identities=18% Similarity=0.248 Sum_probs=165.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCC---eEEEEEeCCchh---h----hccc---------c--------CCCCeEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKA---K----TTLS---------K--------DNPSLQI 116 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~---~V~~~~r~~~~~---~----~~~~---------~--------~~~~~~~ 116 (301)
+++|+|||||||||||++++++|++.+. +|+++.|..... + ++.. . ...++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 4789999999999999999999998753 789999965321 1 1110 0 1357899
Q ss_pred EEccCCCC-----hHhHHHHhcCCCCEEEEccCCCC-CCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEeccccccccc
Q 022216 117 VKADVTEG-----SAKLSEAIGDDSEAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAA 189 (301)
Q Consensus 117 ~~~Dl~~~-----~~~~~~~~~~~~d~Vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iV~~SS~~~~~~~ 189 (301)
+.+|++++ ++....+..+ +|+|||+|+... ..++...+++|+.|+.+++++|++.+ .++||++||.++||..
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~-vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~ 275 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKE-VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQR 275 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhc-CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCC
Confidence 99999984 2445555567 999999998654 33456678999999999999998864 6899999999999876
Q ss_pred CCCCCCcchh-----------------------------------h----------------------cchhhHHHHHHH
Q 022216 190 MGQILNPAYI-----------------------------------F----------------------LNVFGLTLIAKL 212 (301)
Q Consensus 190 ~~~~~~~~~~-----------------------------------~----------------------~~~~~~y~~sK~ 212 (301)
.+...+..|+ . ...-+.|..+|.
T Consensus 276 ~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~ 355 (605)
T PLN02503 276 QGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKA 355 (605)
T ss_pred CCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHH
Confidence 5321111111 0 011267999999
Q ss_pred HHHHHHHHc--CCcEEEEecCcccCCCCC-------C-----c-ee---------eccccccccCCCCHHHHHHHHHHHh
Q 022216 213 QAEQYIRKS--GINYTIIRPGGLRNEPPT-------G-----N-II---------METEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 213 ~~e~~~~~~--~i~~~~irpg~v~~~~~~-------~-----~-~~---------~~~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
.+|+++++. +++++++||+.|.+.... + . .. +........+.+++|.++++++.++
T Consensus 356 lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~ 435 (605)
T PLN02503 356 MGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAM 435 (605)
T ss_pred HHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHH
Confidence 999999753 799999999988442110 1 0 00 1112233345789999999998774
Q ss_pred cC----CCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 269 LH----PESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 269 ~~----~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
.. ....+.+||++++ .-.+++|.|+.+.+.+
T Consensus 436 a~~~~~~~~~~~vYn~ts~-~~nP~t~~~~~~~~~~ 470 (605)
T PLN02503 436 AKHGGAAKPEINVYQIASS-VVNPLVFQDLARLLYE 470 (605)
T ss_pred HhhhcccCCCCCEEEeCCC-CCCCeEHHHHHHHHHH
Confidence 32 1124689999873 2388999999998764
No 84
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.91 E-value=2.2e-23 Score=178.52 Aligned_cols=207 Identities=20% Similarity=0.200 Sum_probs=150.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh----ccccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
+++|+||||||+|+||++++++|+++|++|+++.|+..+..+ .......++.++.+|++| .+++.+.+.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 356899999999999999999999999999887776553221 111134578899999999 7777665532
Q ss_pred -CCCEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||..... ++...+++|+.++.++++++ ++.+.++||++||...+...
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~------------ 150 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW------------ 150 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC------------
Confidence 389999999964321 23456789999999999887 45567899999998765321
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc--c--cccccCCCCHHHHHHHHHHHhcC
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET--E--DTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~--~--~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
.....|..+|...+.+++ +.+++++++|||+++|+.......... . ......+++++|+++++..++..
T Consensus 151 ~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 230 (249)
T PRK12825 151 PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSD 230 (249)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCc
Confidence 124668888888775552 368999999999999987543321110 0 11223478999999999888865
Q ss_pred CC--CCCcEEEeecC
Q 022216 271 PE--SSYKVVEIISR 283 (301)
Q Consensus 271 ~~--~~~~~~~v~~~ 283 (301)
+. ..+++|++.++
T Consensus 231 ~~~~~~g~~~~i~~g 245 (249)
T PRK12825 231 ASDYITGQVIEVTGG 245 (249)
T ss_pred cccCcCCCEEEeCCC
Confidence 42 45888999875
No 85
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.91 E-value=1.4e-23 Score=180.15 Aligned_cols=206 Identities=17% Similarity=0.141 Sum_probs=144.4
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc-hhhhccccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
++++|++|||||+|+||++++++|+++|++|++++|+.. ...+.......++.++.+|++| .+++.+.+.. +
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 356899999999999999999999999999999998752 1122222234578899999999 7666644431 3
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEecccccccccCCCCCCcchhhcc
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
+|+||||||.... ++++..+++|+.+..++++++.+ .+ .++||++||...|....
T Consensus 81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------ 148 (248)
T TIGR01832 81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI------------ 148 (248)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC------------
Confidence 9999999997432 23556789999999999998843 33 46999999987664321
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHHhc
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
....|..+|.+.+.+.+ .+|++++.|+||++.+++........ ........+.+++|+|++++.++.
T Consensus 149 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 228 (248)
T TIGR01832 149 RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLAS 228 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 12467889998886653 25899999999999998643211000 001112357899999999977765
Q ss_pred CCC--CCCcEEEee
Q 022216 270 HPE--SSYKVVEII 281 (301)
Q Consensus 270 ~~~--~~~~~~~v~ 281 (301)
... ..++++.+.
T Consensus 229 ~~~~~~~G~~i~~d 242 (248)
T TIGR01832 229 SASDYVNGYTLAVD 242 (248)
T ss_pred ccccCcCCcEEEeC
Confidence 332 234444443
No 86
>PRK07985 oxidoreductase; Provisional
Probab=99.91 E-value=8.4e-24 Score=186.26 Aligned_cols=206 Identities=17% Similarity=0.172 Sum_probs=142.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc--hhhhc---cccCCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~--~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
.+++|++|||||+|+||++++++|+++|++|++..|+.. ..+++ ......++.++.+|++| .+++.+++..
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~ 124 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHK 124 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence 367899999999999999999999999999998776532 22221 11234567889999999 6655544332
Q ss_pred ---CCCEEEEccCCCC---------CCCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 ---DSEAVVCATGFQP---------GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|++|||||... .++|+..+++|+.++.++++++.+. ..++||++||...+...
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~----------- 193 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS----------- 193 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC-----------
Confidence 3999999998632 1345678899999999999998642 22699999998765322
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCc-----eeec-cccccccCCCCHHHHHHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN-----IIME-TEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~-----~~~~-~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
.....|+.+|.+.+.+.+ .+|+++++|+||++.|++.... .... ........+..++|+|++++.+
T Consensus 194 -~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL 272 (294)
T PRK07985 194 -PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYL 272 (294)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Confidence 113568899998876553 3699999999999999863211 0000 0011112357899999999655
Q ss_pred hcCCCCC---CcEEEeec
Q 022216 268 LLHPESS---YKVVEIIS 282 (301)
Q Consensus 268 l~~~~~~---~~~~~v~~ 282 (301)
+ ++... ++++.+.+
T Consensus 273 ~-s~~~~~itG~~i~vdg 289 (294)
T PRK07985 273 A-SQESSYVTAEVHGVCG 289 (294)
T ss_pred h-ChhcCCccccEEeeCC
Confidence 5 44333 44444443
No 87
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.91 E-value=6.7e-24 Score=185.58 Aligned_cols=204 Identities=22% Similarity=0.276 Sum_probs=146.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHH---H---hc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSE---A---IG 133 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~---~---~~ 133 (301)
+++++|||||+|+||+++++.|+++|++|++++|+++..++.... ...++.++.+|++| .+++.+ . ++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHNFQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999987765443211 13578999999999 665543 2 23
Q ss_pred CCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 134 DDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 134 ~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
. +|+||||||.... +++...+++|+.++.++++++ ++.+.++||++||...+...
T Consensus 81 ~-id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------ 147 (280)
T PRK06914 81 R-IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF------------ 147 (280)
T ss_pred C-eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC------------
Confidence 4 8999999986542 123455789999999988886 55567899999997532111
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee---ccc----------------cccccCCC
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---ETE----------------DTLYEGTI 255 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~---~~~----------------~~~~~~~v 255 (301)
.+...|+.+|...+.+++ ..|+++++++||.+.++........ ... ......+.
T Consensus 148 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (280)
T PRK06914 148 PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFG 227 (280)
T ss_pred CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccC
Confidence 124568889998887654 3589999999999999853321100 000 00112467
Q ss_pred CHHHHHHHHHHHhcCCCCCCcEEEeecC
Q 022216 256 SRDQVAEVAVEALLHPESSYKVVEIISR 283 (301)
Q Consensus 256 ~~~Dva~~~~~~l~~~~~~~~~~~v~~~ 283 (301)
+++|+|++++.++.++... ..|++.++
T Consensus 228 ~~~dva~~~~~~~~~~~~~-~~~~~~~~ 254 (280)
T PRK06914 228 NPIDVANLIVEIAESKRPK-LRYPIGKG 254 (280)
T ss_pred CHHHHHHHHHHHHcCCCCC-cccccCCc
Confidence 9999999999999877643 56777653
No 88
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.7e-23 Score=180.53 Aligned_cols=209 Identities=20% Similarity=0.126 Sum_probs=144.0
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
+++++|++|||||+|+||++++++|+++|++|++++|+.+. .++.. .....++.++.+|++| ++++.+.+..
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~ 82 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEA 82 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987643 22221 1124568889999999 6666654432
Q ss_pred ---CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchh
Q 022216 135 ---DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
++|+||||||.... ++++.++++|+.+++.+++++. +.+.++||++||.+.+....+
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 154 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG-------- 154 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------
Confidence 38999999996432 3456778999999998888763 345579999999864322111
Q ss_pred hcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec-----cccccccCCCCHHHHHHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~-----~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
.....|..+|.+.+.+.+ ..|+++++|+||++.+++....-... ........+..++|+|++++.+
T Consensus 155 --~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l 232 (254)
T PRK06114 155 --LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFL 232 (254)
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 013567888888776543 36899999999999998643210000 0111123356899999999665
Q ss_pred hcCCCC---CCcEEEeec
Q 022216 268 LLHPES---SYKVVEIIS 282 (301)
Q Consensus 268 l~~~~~---~~~~~~v~~ 282 (301)
+ ++.. .|+++.+.+
T Consensus 233 ~-s~~~~~~tG~~i~~dg 249 (254)
T PRK06114 233 L-SDAASFCTGVDLLVDG 249 (254)
T ss_pred c-CccccCcCCceEEECc
Confidence 5 4433 344444443
No 89
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.1e-23 Score=181.45 Aligned_cols=208 Identities=15% Similarity=0.141 Sum_probs=144.8
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++|++|||||+|+||++++++|+++|++|++++|+.++.++.... ...++.++.+|++| .+++.+++..
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAEL 84 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999987765543321 23568889999999 6666555431
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcC-CCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... ++++.++++|+.+++.+++++. +.+ .++||++||....-. ..+
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~------- 155 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII--NVP------- 155 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC--CCC-------
Confidence 39999999996432 2455677899999999999874 222 358999999753210 000
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec---cccccccCCCCHHHHHHHHHHHhcC
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME---TEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~---~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
.....|+.+|.+.+.+.+ ..|++++.|+||.+.+++........ ........+..++|+|++++.++ +
T Consensus 156 -~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~-s 233 (253)
T PRK05867 156 -QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLA-S 233 (253)
T ss_pred -CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHc-C
Confidence 113568899998886654 35899999999999998643211100 00111234678999999996555 4
Q ss_pred CCCC---CcEEEeec
Q 022216 271 PESS---YKVVEIIS 282 (301)
Q Consensus 271 ~~~~---~~~~~v~~ 282 (301)
+... ++++.+.+
T Consensus 234 ~~~~~~tG~~i~vdg 248 (253)
T PRK05867 234 EASSYMTGSDIVIDG 248 (253)
T ss_pred cccCCcCCCeEEECC
Confidence 4333 44444443
No 90
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.91 E-value=3.2e-23 Score=178.14 Aligned_cols=206 Identities=15% Similarity=0.095 Sum_probs=147.7
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
++++++|||||+|+||++++++|+++|++|++++|++++..+.... ...++.++.+|++| .+++.+++.+ +
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999999998765543321 13468899999999 7777665532 3
Q ss_pred CCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
+|+||||||.... +++...+++|+.++.++++.+. +.+.++||++||...+... .
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~ 149 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR------------P 149 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC------------C
Confidence 8999999986432 2345578999999888887774 3556899999998765422 2
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee---c-----cccccccCCCCHHHHHHHHHHH
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---E-----TEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~---~-----~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
....|..+|...+.+.+ ..+++++.++||.+.+++....... . ........+++++|+|++++.+
T Consensus 150 ~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 229 (251)
T PRK07231 150 GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFL 229 (251)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 24567888888775543 2489999999999988764432110 0 0011123467999999999887
Q ss_pred hcCCC--CCCcEEEeec
Q 022216 268 LLHPE--SSYKVVEIIS 282 (301)
Q Consensus 268 l~~~~--~~~~~~~v~~ 282 (301)
+..+. ..++.+.+.+
T Consensus 230 ~~~~~~~~~g~~~~~~g 246 (251)
T PRK07231 230 ASDEASWITGVTLVVDG 246 (251)
T ss_pred hCccccCCCCCeEEECC
Confidence 75443 2355555544
No 91
>PRK06196 oxidoreductase; Provisional
Probab=99.91 E-value=2.2e-23 Score=185.38 Aligned_cols=209 Identities=16% Similarity=0.121 Sum_probs=144.7
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
..+++|+|+||||+|+||++++++|+++|++|++++|+.++.++..... .++.++.+|++| .+++.+.+.. +
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l-~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-DGVEVVMLDLAD-LESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-hhCeEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 3457899999999999999999999999999999999987665543211 348899999999 7766655531 4
Q ss_pred CCEEEEccCCCC------CCCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhh
Q 022216 136 SEAVVCATGFQP------GWDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 136 ~d~Vi~~Ag~~~------~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
+|+||||||... .++++..+++|+.|++++++++ ++.+.++||++||...+.............+..++.
T Consensus 100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
T PRK06196 100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL 179 (315)
T ss_pred CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence 999999999642 1345667899999987777765 444557999999976432111100000012234567
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec--------cccccc-cCCCCHHHHHHHHHHHhc
Q 022216 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME--------TEDTLY-EGTISRDQVAEVAVEALL 269 (301)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~--------~~~~~~-~~~v~~~Dva~~~~~~l~ 269 (301)
.|+.+|.+.+.+.+ ..|+++++|+||++.|+......... ...... ..+.+++|+|..++.++.
T Consensus 180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~ 259 (315)
T PRK06196 180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAAT 259 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhc
Confidence 89999999886542 35899999999999998643211000 000001 124678999999988876
Q ss_pred CCC
Q 022216 270 HPE 272 (301)
Q Consensus 270 ~~~ 272 (301)
.+.
T Consensus 260 ~~~ 262 (315)
T PRK06196 260 SPQ 262 (315)
T ss_pred CCc
Confidence 554
No 92
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.91 E-value=3.2e-24 Score=184.48 Aligned_cols=169 Identities=23% Similarity=0.270 Sum_probs=107.0
Q ss_pred EEcCCchHHHHHHHHHHHCCC--eEEEEEeCCch---hhhc---ccc----------CCCCeEEEEccCCCC-----hHh
Q 022216 71 VAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDK---AKTT---LSK----------DNPSLQIVKADVTEG-----SAK 127 (301)
Q Consensus 71 VtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~---~~~~---~~~----------~~~~~~~~~~Dl~~~-----~~~ 127 (301)
|||||||||++++++|++.+. +|+++.|..+. .+.+ ... ...+++++.+|++++ ++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 99999998743 1111 110 157999999999983 255
Q ss_pred HHHHhcCCCCEEEEccCCCC-CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCC--------CCcch
Q 022216 128 LSEAIGDDSEAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQI--------LNPAY 198 (301)
Q Consensus 128 ~~~~~~~~~d~Vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~--------~~~~~ 198 (301)
+.+...+ +|+|||||+... ..+....+++|+.|+.++++.|.+.+.++|+|+||..+.+...+.. .....
T Consensus 81 ~~~L~~~-v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~ 159 (249)
T PF07993_consen 81 YQELAEE-VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD 159 (249)
T ss_dssp HHHHHHH---EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred hhccccc-cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccch
Confidence 5566677 999999998654 3355567799999999999999977667999999965555444321 11112
Q ss_pred hhcchhhHHHHHHHHHHHHHHH----cCCcEEEEecCcccCCCCCC
Q 022216 199 IFLNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTG 240 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~~----~~i~~~~irpg~v~~~~~~~ 240 (301)
......+.|..||+.+|+++++ .|++++++|||.+.|....+
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G 205 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTG 205 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS
T ss_pred hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCc
Confidence 2234456899999999998864 39999999999999954433
No 93
>PRK06182 short chain dehydrogenase; Validated
Probab=99.91 E-value=4.1e-23 Score=179.98 Aligned_cols=201 Identities=21% Similarity=0.259 Sum_probs=143.5
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
++|+++||||+|+||++++++|+++|++|++++|+.+++.+... .++.++.+|++| .+++.+.+.. ++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---LGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 47899999999999999999999999999999999877665432 458899999999 7777666541 3999
Q ss_pred EEEccCCCCC--------CCCCCceeeehHHHHHHHH----HHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVE----ACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 139 Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~----a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
||||||.... ++++..+++|+.+...+++ .+++.+.++||++||...+.. . .....
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---~---------~~~~~ 145 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY---T---------PLGAW 145 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC---C---------CCccH
Confidence 9999996532 2355678999999665555 456666789999999753211 1 11356
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCC---ceeeccc-----------------cccccCCCCHHH
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG---NIIMETE-----------------DTLYEGTISRDQ 259 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~---~~~~~~~-----------------~~~~~~~v~~~D 259 (301)
|..+|.+.+.+.+ ..|+++++|+||++.|++... ....... ......+.+++|
T Consensus 146 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (273)
T PRK06182 146 YHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSV 225 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence 8899999887642 468999999999999986421 1100000 001123569999
Q ss_pred HHHHHHHHhcCCCCCCcEEEeec
Q 022216 260 VAEVAVEALLHPESSYKVVEIIS 282 (301)
Q Consensus 260 va~~~~~~l~~~~~~~~~~~v~~ 282 (301)
+|++++.++.... ....|.++.
T Consensus 226 vA~~i~~~~~~~~-~~~~~~~g~ 247 (273)
T PRK06182 226 IADAISKAVTARR-PKTRYAVGF 247 (273)
T ss_pred HHHHHHHHHhCCC-CCceeecCc
Confidence 9999998887543 233455443
No 94
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.91 E-value=2.6e-23 Score=180.21 Aligned_cols=205 Identities=14% Similarity=0.102 Sum_probs=143.2
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
+++|+++||||+|+||++++++|+++|++|++++|+.+..+++......++.++++|++| .+++.+++.. ++|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999998876665543234568889999999 6555554431 399
Q ss_pred EEEEccCCCC--------C-----CCCCCceeeehHHHHHHHHHHHHc---CCCEEEEecccccccccCCCCCCcchhhc
Q 022216 138 AVVCATGFQP--------G-----WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 138 ~Vi~~Ag~~~--------~-----~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
+||||||... + ++|+.++++|+.+++++++++.+. ..+++|++||...+.. .
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~------------~ 149 (262)
T TIGR03325 82 CLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP------------N 149 (262)
T ss_pred EEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC------------C
Confidence 9999998632 0 135678999999999999998542 2267999988753311 1
Q ss_pred chhhHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCcee-ec--------c-----ccccccCCCCHHHHH
Q 022216 202 NVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNII-ME--------T-----EDTLYEGTISRDQVA 261 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~~~-~~--------~-----~~~~~~~~v~~~Dva 261 (301)
.....|..+|.+.+.+.+. ..++++.|.||++.+++...... .. . .......+..++|+|
T Consensus 150 ~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva 229 (262)
T TIGR03325 150 GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYT 229 (262)
T ss_pred CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhh
Confidence 1235688999999876642 24999999999999986432100 00 0 001122356899999
Q ss_pred HHHHHHhcCCCC---CCcEEEee
Q 022216 262 EVAVEALLHPES---SYKVVEII 281 (301)
Q Consensus 262 ~~~~~~l~~~~~---~~~~~~v~ 281 (301)
++++.++..+.. .++++.+.
T Consensus 230 ~~~~~l~s~~~~~~~tG~~i~vd 252 (262)
T TIGR03325 230 GAYVFFATRGDTVPATGAVLNYD 252 (262)
T ss_pred hheeeeecCCCcccccceEEEec
Confidence 999665544332 34444443
No 95
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.91 E-value=4.2e-23 Score=178.94 Aligned_cols=193 Identities=17% Similarity=0.103 Sum_probs=139.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
+++|++|||||+|+||++++++|+++|++|++++|+.++.+++......++.++++|++| .+++.+.+.. ++|
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999999998877665543334568899999999 6666555432 499
Q ss_pred EEEEccCCCCC---------C----CCCCceeeehHHHHHHHHHHHHc---CCCEEEEecccccccccCCCCCCcchhhc
Q 022216 138 AVVCATGFQPG---------W----DLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 138 ~Vi~~Ag~~~~---------~----~~~~~~~~N~~g~~~l~~a~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
+||||||+... + .|+.++++|+.+++.+++++.+. ..++||++||...+...
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------ 150 (263)
T PRK06200 83 CFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG------------ 150 (263)
T ss_pred EEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC------------
Confidence 99999996421 1 15567899999999999888532 23689999998754321
Q ss_pred chhhHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCcee-------e-cc-------ccccccCCCCHHHH
Q 022216 202 NVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNII-------M-ET-------EDTLYEGTISRDQV 260 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~~~-------~-~~-------~~~~~~~~v~~~Dv 260 (301)
.....|+.+|.+.+.+.+. .+|+++.|.||++.+++...... . .. .......+..++|+
T Consensus 151 ~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ev 230 (263)
T PRK06200 151 GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDH 230 (263)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHH
Confidence 1235688999988866542 35999999999999886432100 0 00 00112235689999
Q ss_pred HHHHHHHhc
Q 022216 261 AEVAVEALL 269 (301)
Q Consensus 261 a~~~~~~l~ 269 (301)
|++++.++.
T Consensus 231 a~~~~fl~s 239 (263)
T PRK06200 231 TGPYVLLAS 239 (263)
T ss_pred hhhhhheec
Confidence 999965554
No 96
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.91 E-value=3.6e-23 Score=178.69 Aligned_cols=218 Identities=17% Similarity=0.160 Sum_probs=156.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-CCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
+|++|||||+|+||+++++.|+++|++|++++|++++.+++... ...++.++++|++| .+++.+.+.+ ++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 57899999999999999999999999999999988766544321 23468899999999 7766655542 3899
Q ss_pred EEEccCCCCCC--------CCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 139 VVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 139 Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
||||+|..... ++...+++|+.+++++++++ ++.+.++||++||...+... ....
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------~~~~ 147 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-------------GHPA 147 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-------------CCcc
Confidence 99999864321 22344679999999999888 33456789999997532110 0235
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc-------ccccccCCCCHHHHHHHHHHHhcCC-
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEVAVEALLHP- 271 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~-------~~~~~~~~v~~~Dva~~~~~~l~~~- 271 (301)
|+.+|.+.+.+.+ .+|++++.++||++.++.......... .......+++++|++++++.++...
T Consensus 148 y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~ 227 (257)
T PRK07074 148 YSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAA 227 (257)
T ss_pred cHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchh
Confidence 7788888876553 258999999999999886432111000 0112245799999999997777532
Q ss_pred -CCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 272 -ESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 272 -~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
...++++++.+ +......|+++.+.+
T Consensus 228 ~~~~g~~~~~~~---g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 228 RAITGVCLPVDG---GLTAGNREMARTLTL 254 (257)
T ss_pred cCcCCcEEEeCC---CcCcCChhhhhhhcc
Confidence 23466666665 499999999998865
No 97
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.3e-23 Score=179.05 Aligned_cols=204 Identities=16% Similarity=0.126 Sum_probs=148.1
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|+++||||+|+||++++++|+++|++|++++|+.+...+... ....++.++.+|++| .+++.+.+..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999999998765443321 123467889999999 6665554431
Q ss_pred CCCEEEEccCCCCC-----------CCCCCceeeehHHHHHHHHHHHHc----CCCEEEEecccccccccCCCCCCcchh
Q 022216 135 DSEAVVCATGFQPG-----------WDLFAPWKVDNFGTVNLVEACRKR----GVNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~-----------~~~~~~~~~N~~g~~~l~~a~~~~----~~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
++|+||||||+... ++++.++++|+.++.++++++.+. +.++||++||...|.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------ 150 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------ 150 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC------------
Confidence 39999999996421 234456789999999999998543 457999999987552
Q ss_pred hcchhhHHHHHHHHHHHHHHH-------cCCcEEEEecCcccCCCCCCceeec-----cccccccCCCCHHHHHHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~irpg~v~~~~~~~~~~~~-----~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
+.+.|+.+|.+.|.+.+. .++++++++||.+.++......... ........+.+++|+|++++.+
T Consensus 151 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~ 227 (250)
T PRK07774 151 ---YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFL 227 (250)
T ss_pred ---CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 135688999999876642 4899999999999888644321100 0001112356899999999877
Q ss_pred hcCCC--CCCcEEEeecC
Q 022216 268 LLHPE--SSYKVVEIISR 283 (301)
Q Consensus 268 l~~~~--~~~~~~~v~~~ 283 (301)
+..+. ..+++|++.++
T Consensus 228 ~~~~~~~~~g~~~~v~~g 245 (250)
T PRK07774 228 LSDEASWITGQIFNVDGG 245 (250)
T ss_pred hChhhhCcCCCEEEECCC
Confidence 76532 36788888874
No 98
>PRK09186 flagellin modification protein A; Provisional
Probab=99.91 E-value=8e-24 Score=182.55 Aligned_cols=216 Identities=19% Similarity=0.172 Sum_probs=143.9
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++|+||||||+|+||+++++.|+++|++|+++.|++++.++.... ....+.++.+|++| .+++.+++..
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999987765443221 12356678999999 7666665543
Q ss_pred --CCCEEEEccCCCCC-----------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcc
Q 022216 135 --DSEAVVCATGFQPG-----------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~-----------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|+|||||+.... +++...+++|+.+...+++++ ++.+.++||++||...+..... ...+.
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~ 159 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEG 159 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccc
Confidence 38999999974321 124456788998887776665 4456689999999765432111 00111
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcC
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
.. ......|+.+|.+.+.+.+ ..++++++|+||.+.++.................+++++|+|++++.++.+
T Consensus 160 ~~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 238 (256)
T PRK09186 160 TS-MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSD 238 (256)
T ss_pred cc-cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheecc
Confidence 11 1112368999998887653 368999999999988754221100000011123578999999999877764
Q ss_pred CC--CCCcEEEeec
Q 022216 271 PE--SSYKVVEIIS 282 (301)
Q Consensus 271 ~~--~~~~~~~v~~ 282 (301)
.. ..++.+.+.+
T Consensus 239 ~~~~~~g~~~~~~~ 252 (256)
T PRK09186 239 QSKYITGQNIIVDD 252 (256)
T ss_pred ccccccCceEEecC
Confidence 43 2355555444
No 99
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.6e-23 Score=181.39 Aligned_cols=205 Identities=20% Similarity=0.208 Sum_probs=147.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|+++||||+|+||++++++|+++|++|+++.|+.+...+... ....++.++.+|++| .+++.+.+..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999998765443321 123468889999999 7777665542
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||.... +++...+++|+.++.++++++. +.+.++||++||...|... .
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~------------~ 154 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR------------P 154 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC------------C
Confidence 38999999996432 1233456899999999988874 3445789999998765322 1
Q ss_pred hhhHHHHHHHHHHHHHHH-------cCCcEEEEecCcccCCCCCCce---ee---c----cccccccCCCCHHHHHHHHH
Q 022216 203 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI---IM---E----TEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~-------~~i~~~~irpg~v~~~~~~~~~---~~---~----~~~~~~~~~v~~~Dva~~~~ 265 (301)
....|..+|.+.|.+.+. .|+++++|+||.+.++...... .. . ........+++++|+|++++
T Consensus 155 ~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~ 234 (274)
T PRK07775 155 HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAIT 234 (274)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHH
Confidence 235688999999876642 3899999999998776432110 00 0 00111234789999999998
Q ss_pred HHhcCCCCCCcEEEeec
Q 022216 266 EALLHPESSYKVVEIIS 282 (301)
Q Consensus 266 ~~l~~~~~~~~~~~v~~ 282 (301)
.++.++. .+.+||+.-
T Consensus 235 ~~~~~~~-~~~~~~~~~ 250 (274)
T PRK07775 235 FVAETPR-GAHVVNMEV 250 (274)
T ss_pred HHhcCCC-CCCeeEEee
Confidence 8887764 456777765
No 100
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.91 E-value=3.5e-23 Score=180.06 Aligned_cols=196 Identities=23% Similarity=0.307 Sum_probs=144.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
++++++||||+|+||++++++|+++|++|++++|++++.. ...+++++++|++| .+++.+++.+ ++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-----PIPGVELLELDVTD-DASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----ccCCCeeEEeecCC-HHHHHHHHHHHHHhCCCCCE
Confidence 4679999999999999999999999999999999876543 23578899999999 7777666543 3899
Q ss_pred EEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 139 Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
||||||.... +++...+++|+.|+.++++++ ++.+.++||++||...+... .....
T Consensus 77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~ 144 (270)
T PRK06179 77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA------------PYMAL 144 (270)
T ss_pred EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC------------CCccH
Confidence 9999997532 234567899999999988885 55677899999998644211 12357
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccc---------------cccccCCCCHHHHHHHH
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE---------------DTLYEGTISRDQVAEVA 264 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~---------------~~~~~~~v~~~Dva~~~ 264 (301)
|+.+|.+.+.+.+ +.|+++++|+||++.++...+....... .........++|+|+.+
T Consensus 145 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 224 (270)
T PRK06179 145 YAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTV 224 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHH
Confidence 8899999886653 3699999999999999864432110000 01112346889999999
Q ss_pred HHHhcCCCCCCcEEE
Q 022216 265 VEALLHPESSYKVVE 279 (301)
Q Consensus 265 ~~~l~~~~~~~~~~~ 279 (301)
+.++..+. ....|.
T Consensus 225 ~~~~~~~~-~~~~~~ 238 (270)
T PRK06179 225 VKAALGPW-PKMRYT 238 (270)
T ss_pred HHHHcCCC-CCeeEe
Confidence 88887654 233443
No 101
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.2e-23 Score=179.70 Aligned_cols=206 Identities=16% Similarity=0.141 Sum_probs=146.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~-~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
+++++++||||+|+||+++++.|+++|++|+++ .|+.++.++.... ....+.++.+|++| .+++.++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999875 5665544332211 23568899999999 7777665541
Q ss_pred -------CCCEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcc
Q 022216 135 -------DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 -------~~d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|+||||||..... .++.++++|+.++.++++++.+. ..+++|++||..++...
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~-------- 154 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF-------- 154 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC--------
Confidence 389999999964321 23455679999999999998653 34689999998765322
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee------eccccccccCCCCHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII------METEDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~------~~~~~~~~~~~v~~~Dva~~~ 264 (301)
.....|+.+|.+.+.+.+ ..++++++++||++.++....... .......+..+.+++|+|+++
T Consensus 155 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 230 (254)
T PRK12746 155 ----TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAV 230 (254)
T ss_pred ----CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 224568899999886543 358999999999999986432110 001112234466899999999
Q ss_pred HHHhcCCC--CCCcEEEeec
Q 022216 265 VEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 265 ~~~l~~~~--~~~~~~~v~~ 282 (301)
..++..+. ..+++|++.+
T Consensus 231 ~~l~~~~~~~~~g~~~~i~~ 250 (254)
T PRK12746 231 AFLASSDSRWVTGQIIDVSG 250 (254)
T ss_pred HHHcCcccCCcCCCEEEeCC
Confidence 76665432 2467888865
No 102
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.91 E-value=1.3e-23 Score=181.71 Aligned_cols=205 Identities=17% Similarity=0.106 Sum_probs=140.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++|++|||||+|+||++++++|+++|++|++++|+.. ..+.. ......+.++.+|++| .+++.+.+..
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAF 82 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHc
Confidence 356899999999999999999999999999999998753 22211 1123567889999999 6555544431
Q ss_pred -CCCEEEEccCCCC---------CCCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQP---------GWDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||... .+++...+++|+.++..+++++ ++.+.++||++||...++.
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------ 150 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------ 150 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------
Confidence 3999999998531 1234456789999988776665 4456679999999875531
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCc--e-eecc--------------ccccccCCCC
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN--I-IMET--------------EDTLYEGTIS 256 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~--~-~~~~--------------~~~~~~~~v~ 256 (301)
....|+.+|.+.+.+.+ ..|+++++|+||+++|++.... . .... .......+.+
T Consensus 151 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T PRK12823 151 --NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGT 228 (260)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCC
Confidence 12458899998887654 2489999999999999852100 0 0000 0111123458
Q ss_pred HHHHHHHHHHHhcCCC--CCCcEEEeecC
Q 022216 257 RDQVAEVAVEALLHPE--SSYKVVEIISR 283 (301)
Q Consensus 257 ~~Dva~~~~~~l~~~~--~~~~~~~v~~~ 283 (301)
++|+|++++.++.... ..++++++.++
T Consensus 229 ~~dva~~~~~l~s~~~~~~~g~~~~v~gg 257 (260)
T PRK12823 229 IDEQVAAILFLASDEASYITGTVLPVGGG 257 (260)
T ss_pred HHHHHHHHHHHcCcccccccCcEEeecCC
Confidence 9999999866664332 34667777653
No 103
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.2e-23 Score=179.79 Aligned_cols=207 Identities=12% Similarity=0.086 Sum_probs=145.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++|+++||||+|+||.+++++|+++|++|++++|++++.+++... ...++.++.+|++| .+++.+++..
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERF 81 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhc
Confidence 34689999999999999999999999999999999988766544321 23568899999999 6666655541
Q ss_pred -CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... ++++.++++|+.+.+.+++++ ++.+.++||++||...+...
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------- 150 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG----------- 150 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC-----------
Confidence 49999999996421 235667899999988887765 44556799999998644211
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
...+..|..+|.+.+.+.+ ..|++++.|+||++.+++........ ........+.+++|+|+.++.+
T Consensus 151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 230 (254)
T PRK07478 151 FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFL 230 (254)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 1124678899998876553 35899999999999998543211000 0001122356899999999766
Q ss_pred hcCCC--CCCcEEEee
Q 022216 268 LLHPE--SSYKVVEII 281 (301)
Q Consensus 268 l~~~~--~~~~~~~v~ 281 (301)
+..+. ..|+++.+.
T Consensus 231 ~s~~~~~~~G~~~~~d 246 (254)
T PRK07478 231 ASDAASFVTGTALLVD 246 (254)
T ss_pred cCchhcCCCCCeEEeC
Confidence 64332 235555554
No 104
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.91 E-value=2.1e-23 Score=179.72 Aligned_cols=204 Identities=21% Similarity=0.165 Sum_probs=145.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHH-------HhcCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSE-------AIGDD 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~-------~~~~~ 135 (301)
+|++|||||+|+||++++++|+++|++|++++|+.+..+.+.. ....++.++.+|++| .+++.+ .+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~- 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG- 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC-
Confidence 4689999999999999999999999999999998765544322 123578899999999 764443 3445
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|+||||||.... ++++.++++|+.|+..+++++ ++.+.+++|++||...+.... .
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~------------~ 146 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP------------F 146 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC------------C
Confidence 9999999986432 123445678999988888877 556678999999986543221 1
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-------ec---------cccccccCCCCHHHH
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------ME---------TEDTLYEGTISRDQV 260 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-------~~---------~~~~~~~~~v~~~Dv 260 (301)
...|..+|.+.+.+.+ ..+++++++|||.++++....... .. ........+++++|+
T Consensus 147 ~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 226 (255)
T TIGR01963 147 KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEV 226 (255)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHH
Confidence 3556777777765543 258999999999999875321110 00 001122358999999
Q ss_pred HHHHHHHhcCCC--CCCcEEEeecC
Q 022216 261 AEVAVEALLHPE--SSYKVVEIISR 283 (301)
Q Consensus 261 a~~~~~~l~~~~--~~~~~~~v~~~ 283 (301)
|++++.++.++. ..++.|++.++
T Consensus 227 a~~~~~~~~~~~~~~~g~~~~~~~g 251 (255)
T TIGR01963 227 AETALFLASDAAAGITGQAIVLDGG 251 (255)
T ss_pred HHHHHHHcCccccCccceEEEEcCc
Confidence 999988887642 35778888874
No 105
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.1e-23 Score=181.88 Aligned_cols=207 Identities=16% Similarity=0.155 Sum_probs=148.9
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
++++++++|||||+|+||++++++|+++|++|++++|+++.. +.. .....++.++.+|+++ .+++.+.+.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 80 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAK 80 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999987654 211 1134578999999999 7766665542
Q ss_pred --CCCEEEEccCCCCC-------CCCCCceeeehHHHHHHHHHHHH---cCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 --DSEAVVCATGFQPG-------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~-------~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||.... ++++..+++|+.+..++++++.+ .+.++||++||...+... .
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------~ 148 (258)
T PRK08628 81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ------------G 148 (258)
T ss_pred cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC------------C
Confidence 39999999996432 23455688999999999888743 234789999998643211 2
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-eccc---------cccc-cCCCCHHHHHHHH
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-METE---------DTLY-EGTISRDQVAEVA 264 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-~~~~---------~~~~-~~~v~~~Dva~~~ 264 (301)
.+..|+.+|.+.+.+.+ .++++++.|+||.++++....... .... .... ..+++++|+|+++
T Consensus 149 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 228 (258)
T PRK08628 149 GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTA 228 (258)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHH
Confidence 24678999999987664 358999999999999986332110 0000 0011 2467899999999
Q ss_pred HHHhcCC--CCCCcEEEeec
Q 022216 265 VEALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 265 ~~~l~~~--~~~~~~~~v~~ 282 (301)
+.++... ...++.+.+.+
T Consensus 229 ~~l~~~~~~~~~g~~~~~~g 248 (258)
T PRK08628 229 VFLLSERSSHTTGQWLFVDG 248 (258)
T ss_pred HHHhChhhccccCceEEecC
Confidence 8877654 24566666644
No 106
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.91 E-value=4.1e-23 Score=177.36 Aligned_cols=208 Identities=18% Similarity=0.149 Sum_probs=150.4
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+.+|+||||||+|+||.++++.|+++|++|++++|+.++..... .....++.++.+|++| .+++.+.+.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999999876544322 1133468899999999 7777766642
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||+|.... +++...+++|+.++.++++++. +.+.++||++||...+.. + ..
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~--~---------~~ 151 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV--G---------YP 151 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc--C---------CC
Confidence 39999999986542 2345567899999999998873 445679999999875411 1 12
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-----ccccccccCCCCHHHHHHHHHHHhcC
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-----~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
....|+.+|.+++.+++ ..++++++++||+++|+........ .........+++++|+|++++.++..
T Consensus 152 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (251)
T PRK12826 152 GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASD 231 (251)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 24568899988876553 3589999999999999864322110 00111223578999999999876654
Q ss_pred CC--CCCcEEEeecC
Q 022216 271 PE--SSYKVVEIISR 283 (301)
Q Consensus 271 ~~--~~~~~~~v~~~ 283 (301)
+. ..++.+++.++
T Consensus 232 ~~~~~~g~~~~~~~g 246 (251)
T PRK12826 232 EARYITGQTLPVDGG 246 (251)
T ss_pred cccCcCCcEEEECCC
Confidence 43 35788888763
No 107
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.1e-23 Score=180.44 Aligned_cols=202 Identities=18% Similarity=0.176 Sum_probs=142.9
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHH-------hcC
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-------IGD 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~ 134 (301)
..+++|++|||||+|+||++++++|+++|++|++++|+.... ...++.++++|++| .+++.+. ++.
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 77 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------LPEGVEFVAADLTT-AEGCAAVARAVLERLGG 77 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------cCCceeEEecCCCC-HHHHHHHHHHHHHHcCC
Confidence 356789999999999999999999999999999999986542 23468899999999 6655443 345
Q ss_pred CCCEEEEccCCCC----------CCCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 DSEAVVCATGFQP----------GWDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
+|+||||||... .++++..+++|+.+++++++++ ++.+.++||++||...+...
T Consensus 78 -id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------- 145 (260)
T PRK06523 78 -VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----------- 145 (260)
T ss_pred -CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----------
Confidence 999999999532 1245667899999998887766 44455789999998643211
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-------ecc-----------ccccccCCC
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------MET-----------EDTLYEGTI 255 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-------~~~-----------~~~~~~~~v 255 (301)
......|+.+|.+.+.+.+ ..|+++++|+||.+.+++...... ... .......+.
T Consensus 146 ~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 225 (260)
T PRK06523 146 PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPA 225 (260)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCC
Confidence 0124678899998886653 358999999999999986422100 000 001122356
Q ss_pred CHHHHHHHHHHHhcCC--CCCCcEEEeec
Q 022216 256 SRDQVAEVAVEALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 256 ~~~Dva~~~~~~l~~~--~~~~~~~~v~~ 282 (301)
.++|+|++++.++..+ ...++++.+.+
T Consensus 226 ~~~~va~~~~~l~s~~~~~~~G~~~~vdg 254 (260)
T PRK06523 226 EPEEVAELIAFLASDRAASITGTEYVIDG 254 (260)
T ss_pred CHHHHHHHHHHHhCcccccccCceEEecC
Confidence 8999999997666432 23455666655
No 108
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.2e-22 Score=174.76 Aligned_cols=206 Identities=15% Similarity=0.133 Sum_probs=147.1
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+++|+++||||+|+||++++++|+++|++|+++.|+.+...+.... .+.++.++++|++| .+++.+++.. +
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999987655443321 23568899999999 7776665541 3
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|+||||||.... +++...+++|+.++.++++++ ++.+.++||++||...+... ..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~~ 149 (252)
T PRK06138 82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG------------RG 149 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC------------CC
Confidence 9999999996432 123456789999998877765 45566899999998643211 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec----------cccccccCCCCHHHHHHHHHH
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME----------TEDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~----------~~~~~~~~~v~~~Dva~~~~~ 266 (301)
...|+.+|.+.+.+.+ ..|+++++++||++.++......... ........+++++|+|++++.
T Consensus 150 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~ 229 (252)
T PRK06138 150 RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALF 229 (252)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 3568889988886653 24899999999999998643321110 001122247899999999988
Q ss_pred HhcCCC--CCCcEEEeec
Q 022216 267 ALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 267 ~l~~~~--~~~~~~~v~~ 282 (301)
++..+. ..+..+.+.+
T Consensus 230 l~~~~~~~~~g~~~~~~~ 247 (252)
T PRK06138 230 LASDESSFATGTTLVVDG 247 (252)
T ss_pred HcCchhcCccCCEEEECC
Confidence 876654 2345555543
No 109
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=7.2e-23 Score=175.96 Aligned_cols=207 Identities=16% Similarity=0.139 Sum_probs=146.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
|+++++|||||+|+||+++++.|+++|++|+++ .|+..+.++... ....++.++.+|++| .+++.+++.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 357899999999999999999999999998764 666654433221 134578899999999 6666665542
Q ss_pred -CCCEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 -DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||..... ++...+++|+.++.++++++.+ .+.++||++||...+.. .
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~ 148 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY------------L 148 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC------------C
Confidence 399999999864321 2233578999999999988854 44579999999754321 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee---e--c-cccccccCCCCHHHHHHHHHHHh
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---M--E-TEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~---~--~-~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
.++..|+.+|.+.+.+++ ..|++++.|+||++.++....... . . ........+++++|+|++++.++
T Consensus 149 ~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~ 228 (250)
T PRK08063 149 ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLC 228 (250)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence 224678999999998764 368999999999998875322100 0 0 00111234789999999998877
Q ss_pred cCCC--CCCcEEEeecC
Q 022216 269 LHPE--SSYKVVEIISR 283 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~~ 283 (301)
.++. ..++.+++.++
T Consensus 229 ~~~~~~~~g~~~~~~gg 245 (250)
T PRK08063 229 SPEADMIRGQTIIVDGG 245 (250)
T ss_pred CchhcCccCCEEEECCC
Confidence 6543 34677776653
No 110
>PRK06398 aldose dehydrogenase; Validated
Probab=99.91 E-value=3.7e-23 Score=178.87 Aligned_cols=199 Identities=17% Similarity=0.106 Sum_probs=141.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
++++|++|||||+|+||++++++|+++|++|++++|+.... .++.++.+|++| .+++.+++.. ++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------NDVDYFKVDVSN-KEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------CceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35689999999999999999999999999999999875431 368889999999 6666555431 39
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|+||||||.... ++|+..+++|+.|++++++++. +.+.++||++||...+.. ....
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~ 141 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV------------TRNA 141 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC------------CCCC
Confidence 999999996431 2455678999999999988874 345579999999865421 1234
Q ss_pred hHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCceee----c-----------cccccccCCCCHHHHHHH
Q 022216 205 GLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIM----E-----------TEDTLYEGTISRDQVAEV 263 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~~~~----~-----------~~~~~~~~~v~~~Dva~~ 263 (301)
..|+.+|.+.+.+.+. .+++++.|+||++.+++....... . ........+..++|+|++
T Consensus 142 ~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~ 221 (258)
T PRK06398 142 AAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYV 221 (258)
T ss_pred chhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHH
Confidence 6788999998876642 249999999999998753221000 0 001112235689999999
Q ss_pred HHHHhcCCC--CCCcEEEeec
Q 022216 264 AVEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 264 ~~~~l~~~~--~~~~~~~v~~ 282 (301)
++.++.... ..++++.+.+
T Consensus 222 ~~~l~s~~~~~~~G~~i~~dg 242 (258)
T PRK06398 222 VAFLASDLASFITGECVTVDG 242 (258)
T ss_pred HHHHcCcccCCCCCcEEEECC
Confidence 966554322 3455555544
No 111
>PRK08589 short chain dehydrogenase; Validated
Probab=99.91 E-value=5.1e-23 Score=179.36 Aligned_cols=204 Identities=16% Similarity=0.098 Sum_probs=142.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|++|||||+|+||++++++|+++|++|++++|+ ++.++... +...++.++.+|++| .+++.+++..
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999998 55443321 123468899999999 6555554432
Q ss_pred CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||.... ++++.++++|+.+.+.+++++. +.+ ++||++||...+...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------ 148 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD------------ 148 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC------------
Confidence 39999999996431 1245567899999988888863 334 799999998644221
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc------------ccccccCCCCHHHHHH
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------------EDTLYEGTISRDQVAE 262 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~------------~~~~~~~~v~~~Dva~ 262 (301)
.....|..+|.+.+.+.+ ..|++++.|.||.+.+++......... .......+.+++|+|+
T Consensus 149 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 228 (272)
T PRK08589 149 LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAK 228 (272)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHH
Confidence 113568889988886654 358999999999999986432110000 0011223568999999
Q ss_pred HHHHHhcCC--CCCCcEEEeec
Q 022216 263 VAVEALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 263 ~~~~~l~~~--~~~~~~~~v~~ 282 (301)
+++.++..+ ...++++.+.+
T Consensus 229 ~~~~l~s~~~~~~~G~~i~vdg 250 (272)
T PRK08589 229 LVVFLASDDSSFITGETIRIDG 250 (272)
T ss_pred HHHHHcCchhcCcCCCEEEECC
Confidence 997666432 23455555544
No 112
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=2.6e-23 Score=179.22 Aligned_cols=192 Identities=18% Similarity=0.215 Sum_probs=135.9
Q ss_pred cccCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-CCCCeEEEEccCCCChHhHHHHh-------
Q 022216 63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAI------- 132 (301)
Q Consensus 63 ~~~~~~vlVtGat--G~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------- 132 (301)
.+++|+++||||+ ++||++++++|+++|++|++.+|+. +..+...+ ....+.++++|++| .+++.+.+
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERV 81 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 3568999999999 7999999999999999999998873 32222111 22467889999999 65555443
Q ss_pred cCCCCEEEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcch
Q 022216 133 GDDSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY 198 (301)
Q Consensus 133 ~~~~d~Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~ 198 (301)
+. +|++|||||.... ++|+..+++|+.+.+.+++++.+. ..++||++||.+... +
T Consensus 82 g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~---~------- 150 (252)
T PRK06079 82 GK-IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER---A------- 150 (252)
T ss_pred CC-CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc---c-------
Confidence 44 9999999996421 245667899999999999888543 236899999975221 1
Q ss_pred hhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee----ec--cccccccCCCCHHHHHHHHH
Q 022216 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----ME--TEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~----~~--~~~~~~~~~v~~~Dva~~~~ 265 (301)
...+..|+.+|.+.+.+.+ .+||+++.|.||.+.+++...... .. ........+..++|+|++++
T Consensus 151 --~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~ 228 (252)
T PRK06079 151 --IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAA 228 (252)
T ss_pred --CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHH
Confidence 1224678899999886653 368999999999999986422100 00 00111234678999999996
Q ss_pred HHhc
Q 022216 266 EALL 269 (301)
Q Consensus 266 ~~l~ 269 (301)
.++.
T Consensus 229 ~l~s 232 (252)
T PRK06079 229 FLLS 232 (252)
T ss_pred HHhC
Confidence 6654
No 113
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.90 E-value=1.9e-23 Score=180.14 Aligned_cols=195 Identities=16% Similarity=0.156 Sum_probs=140.9
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++++|++|||||+|+||++++++|+++|++|++++|+.++..+... ....++.++.+|++| .+++.+.+..
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKD 83 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999998766554322 123467888999999 6666655432
Q ss_pred --CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... ++|+.++++|+.++.++++++.+ .+.++||++||..... +
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---~--------- 151 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL---G--------- 151 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc---C---------
Confidence 39999999996431 34666889999999999888743 3457999999975321 1
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
......|..+|.+.+.+.+ .+|++++.|+||++.++......... ........+..++|+|++++.+
T Consensus 152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l 231 (254)
T PRK08085 152 RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFL 231 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 1224568889998886654 35899999999999998643321100 0011123467899999988655
Q ss_pred hc
Q 022216 268 LL 269 (301)
Q Consensus 268 l~ 269 (301)
+.
T Consensus 232 ~~ 233 (254)
T PRK08085 232 SS 233 (254)
T ss_pred hC
Confidence 54
No 114
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.90 E-value=6.4e-23 Score=176.85 Aligned_cols=208 Identities=16% Similarity=0.080 Sum_probs=146.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+++++|++|||||+|+||+++++.|+++|++|+++.|+..............+.++.+|+++ .+++.+.+.+ +
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGR 89 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 35678999999999999999999999999999999998654322111123457789999999 7666655432 3
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|+||||||.... +++..++++|+.+++++++++.. .+.++||++||....... ..
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~ 157 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL------------ER 157 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC------------CC
Confidence 8999999996432 23445789999999999999853 356799999998532111 11
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-----ccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-----~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
...|+.+|.+.+.+.+ ..|++++.|+||.+.+++....... .........+.+++|+|++++.++..+
T Consensus 158 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 237 (255)
T PRK06841 158 HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDA 237 (255)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 3567888888776553 3589999999999998864321100 001112235789999999998777543
Q ss_pred C--CCCcEEEeec
Q 022216 272 E--SSYKVVEIIS 282 (301)
Q Consensus 272 ~--~~~~~~~v~~ 282 (301)
. ..|+++.+.+
T Consensus 238 ~~~~~G~~i~~dg 250 (255)
T PRK06841 238 AAMITGENLVIDG 250 (255)
T ss_pred ccCccCCEEEECC
Confidence 2 3455665554
No 115
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.90 E-value=7e-23 Score=182.82 Aligned_cols=196 Identities=15% Similarity=0.131 Sum_probs=144.1
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHh-------
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAI------- 132 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~------- 132 (301)
++++|+||||||+|+||++++++|+++|++|++++|+.+.+++... .....+.++.+|++| .+++.+++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFG 82 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhc
Confidence 3568999999999999999999999999999999999877655432 134567889999999 77666655
Q ss_pred cCCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 133 GDDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 133 ~~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
+. +|++|||||.... ++++..+++|+.++.++++++ ++.+.++||++||...+...
T Consensus 83 g~-iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~----------- 150 (330)
T PRK06139 83 GR-IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ----------- 150 (330)
T ss_pred CC-CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC-----------
Confidence 44 9999999996432 234557899999999988886 34455799999998644221
Q ss_pred cchhhHHHHHHHHHHHHHH-------H-cCCcEEEEecCcccCCCCCCceeecc-ccccccCCCCHHHHHHHHHHHhcCC
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEPPTGNIIMET-EDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~-~~i~~~~irpg~v~~~~~~~~~~~~~-~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.....|..+|.+.+.+.+ + .+++++.|.||.+.|++......... ........++++|+|++++.++.++
T Consensus 151 -p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~ 229 (330)
T PRK06139 151 -PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRP 229 (330)
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 123568888887654432 2 38999999999999986533211111 1111234679999999999999876
Q ss_pred C
Q 022216 272 E 272 (301)
Q Consensus 272 ~ 272 (301)
.
T Consensus 230 ~ 230 (330)
T PRK06139 230 R 230 (330)
T ss_pred C
Confidence 4
No 116
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.90 E-value=5.1e-23 Score=176.80 Aligned_cols=205 Identities=14% Similarity=0.118 Sum_probs=146.4
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+++++|||||+|+||++++++|+++|++|++++|+.+...+... ....++.++.+|++| .+++.+.+.. +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999998766544321 134578999999999 7776665541 3
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|+||||||.... ++++..+++|+.++.++++++. +.+.++||++||...+.... .
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~------------~ 148 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS------------G 148 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC------------C
Confidence 9999999986432 1234568899999999888874 45668999999987654321 1
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec--c--------ccccccCCCCHHHHHHHHHH
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME--T--------EDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~--~--------~~~~~~~~v~~~Dva~~~~~ 266 (301)
...|+.+|.+.+.+.+ ..++++++++||.+++++........ . .......+..++|+|+++..
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 228 (250)
T TIGR03206 149 EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILF 228 (250)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHH
Confidence 3568888887765543 25899999999999988533211000 0 01111235689999999977
Q ss_pred HhcCCC--CCCcEEEeec
Q 022216 267 ALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 267 ~l~~~~--~~~~~~~v~~ 282 (301)
++..+. ..++++.+.+
T Consensus 229 l~~~~~~~~~g~~~~~~~ 246 (250)
T TIGR03206 229 FSSDDASFITGQVLSVSG 246 (250)
T ss_pred HcCcccCCCcCcEEEeCC
Confidence 665432 2467777754
No 117
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.90 E-value=9.1e-23 Score=176.04 Aligned_cols=206 Identities=17% Similarity=0.151 Sum_probs=143.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
.+++|+++||||+|+||++++++|+++|++|+++.|+.+...+... ..++.++.+|++| .+++.+++.. ++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~--~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR--EKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH--hCCCeEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence 4568999999999999999999999999999988766543322221 1257889999999 7666665542 39
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|+||||||.... ++++.++++|+.+++.+++++ ++.+.++||++||...++... ...
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------~~~ 149 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA-----------EGT 149 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC-----------CCc
Confidence 999999997431 235567899999987776665 444557999999987653210 123
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec---------cccccccCCCCHHHHHHHHHHHh
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME---------TEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~---------~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
..|..+|.+.+.+.+ ..|++++.|+||++.+++........ ........+.+++|+|++++.++
T Consensus 150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 229 (255)
T PRK06463 150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLA 229 (255)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHc
Confidence 568899998886653 35899999999999988643211000 01112223568999999997766
Q ss_pred cCCC--CCCcEEEeec
Q 022216 269 LHPE--SSYKVVEIIS 282 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~ 282 (301)
..+. ..+..+.+.+
T Consensus 230 s~~~~~~~G~~~~~dg 245 (255)
T PRK06463 230 SDDARYITGQVIVADG 245 (255)
T ss_pred ChhhcCCCCCEEEECC
Confidence 5432 3456666654
No 118
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.1e-22 Score=173.87 Aligned_cols=193 Identities=16% Similarity=0.200 Sum_probs=142.5
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
++|++|||||+|+||++++++|+++|++|++++|++++.+++.. ....++.++.+|++| .+++.+.+.. +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999999999998766544322 123578899999999 6666555431 3
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|+||||||.... ++++.++++|+.+++++++++ ++.+.++||++||...++.. ..
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~ 151 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF------------PQ 151 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC------------CC
Confidence 9999999996432 235566889999999988776 34455799999998765422 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
+..|..+|.+.+.+.+ ..|+++++|+||++.++.......... .....+++++|+|++++.++..+.
T Consensus 152 ~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 152 WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQAD--FDRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccc--cccccCCCHHHHHHHHHHHHcCCc
Confidence 3568889998886553 358999999999999986432211110 111246899999999988887664
No 119
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.90 E-value=7.3e-23 Score=174.44 Aligned_cols=204 Identities=19% Similarity=0.175 Sum_probs=147.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-CCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
.+++|++|||||+|+||++++++|+++|++|++++|++.+..+.... ...++.++.+|++| .+++.+.+.+ +
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 35689999999999999999999999999999999987654432211 22467788999999 6666555432 3
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|+|||++|.... +++...+++|+.++.++++++. +.+.++||++||...+... ..
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~ 150 (239)
T PRK12828 83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG------------PG 150 (239)
T ss_pred cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC------------CC
Confidence 9999999986432 1234557899999999988874 4467899999999766432 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC--CC
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE--SS 274 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~--~~ 274 (301)
...|+.+|.+.+.+++ +.+++++.++||+++++....... ......+++++|+|+++..++..+. ..
T Consensus 151 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~----~~~~~~~~~~~dva~~~~~~l~~~~~~~~ 226 (239)
T PRK12828 151 MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP----DADFSRWVTPEQIAAVIAFLLSDEAQAIT 226 (239)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC----chhhhcCCCHHHHHHHHHHHhCccccccc
Confidence 3567788887765553 358999999999999985332211 1122347899999999987776542 34
Q ss_pred CcEEEeecC
Q 022216 275 YKVVEIISR 283 (301)
Q Consensus 275 ~~~~~v~~~ 283 (301)
++.+.+.++
T Consensus 227 g~~~~~~g~ 235 (239)
T PRK12828 227 GASIPVDGG 235 (239)
T ss_pred ceEEEecCC
Confidence 667777663
No 120
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.90 E-value=5.4e-23 Score=177.75 Aligned_cols=206 Identities=15% Similarity=0.140 Sum_probs=144.8
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh---ccccCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
..+++|+||||||+|+||++++++|+++|++|+++.|+ .+.++ .......++.++.+|++| .+++.+.+.+
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~ 88 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEE 88 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999987 33322 222234578899999999 7666665542
Q ss_pred --CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|++|||||.... ++++..+++|+.+..++++++. +.+.++||++||...+...
T Consensus 89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 157 (258)
T PRK06935 89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG----------- 157 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC-----------
Confidence 39999999996431 2455678899999988887764 4456799999998754321
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc------ccccccCCCCHHHHHHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~------~~~~~~~~v~~~Dva~~~~~~ 267 (301)
..+..|+.+|.+.+.+.+ ..|++++.|+||.+.++.......... .......+..++|+|+.+..+
T Consensus 158 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 236 (258)
T PRK06935 158 -KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFL 236 (258)
T ss_pred -CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 123578889998886653 358999999999999875322110000 011123477899999999655
Q ss_pred hcCCC---CCCcEEEeec
Q 022216 268 LLHPE---SSYKVVEIIS 282 (301)
Q Consensus 268 l~~~~---~~~~~~~v~~ 282 (301)
+ ++. ..+.++.+.+
T Consensus 237 ~-s~~~~~~~G~~i~~dg 253 (258)
T PRK06935 237 A-SRASDYVNGHILAVDG 253 (258)
T ss_pred c-ChhhcCCCCCEEEECC
Confidence 5 443 3455555444
No 121
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.3e-23 Score=178.32 Aligned_cols=188 Identities=20% Similarity=0.253 Sum_probs=139.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccC--CCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
+|+|+||||+|+||+++++.|+++|++|++++|+.+.+++..... ..++.++.+|++| .+++.+.+.. ++|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCCC
Confidence 479999999999999999999999999999999877665433211 1278899999999 7777665432 389
Q ss_pred EEEEccCCCCC---------CCCCCceeeehHHHHHHHHH----HHHcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 138 AVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEA----CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 138 ~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a----~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
+||||||.... ++++.++++|+.|+.+++++ +++.+.++||++||...+... ...
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~------------~~~ 148 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL------------PGA 148 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC------------CCC
Confidence 99999996432 12445689999999998774 455666899999997643211 123
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
..|+.+|.+.+.+.+ ..|+++++|+||++.+++..... ......++++|+|+.++.++.++.
T Consensus 149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------~~~~~~~~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------YPMPFLMDADRFAARAARAIARGR 217 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------CCCCCccCHHHHHHHHHHHHhCCC
Confidence 568899999886652 46899999999999998643210 011124789999999999997653
No 122
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.90 E-value=1.3e-22 Score=169.19 Aligned_cols=219 Identities=22% Similarity=0.229 Sum_probs=180.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc--cCCCCeEEEEccCCCChHhHHHHhcCCCCEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 139 (301)
.+.+|-++-|.|||||+|+.++.+|++.|-.|++-.|..+.....+. .....+-+..-|+.| +++++++.+. -++|
T Consensus 57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~D-edSIr~vvk~-sNVV 134 (391)
T KOG2865|consen 57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRD-EDSIRAVVKH-SNVV 134 (391)
T ss_pred ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCC-HHHHHHHHHh-CcEE
Confidence 45678899999999999999999999999999998887654332221 234678899999999 8999999999 9999
Q ss_pred EEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHH
Q 022216 140 VCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR 219 (301)
Q Consensus 140 i~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~ 219 (301)
||..|...+.....+.++|+.+...|.+.|++.|+.|+|.+|+..+ + .+.-+-|..+|.++|..++
T Consensus 135 INLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga---n-----------v~s~Sr~LrsK~~gE~aVr 200 (391)
T KOG2865|consen 135 INLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA---N-----------VKSPSRMLRSKAAGEEAVR 200 (391)
T ss_pred EEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc---c-----------ccChHHHHHhhhhhHHHHH
Confidence 9999976665556678999999999999999999999999999742 1 1223667899999999888
Q ss_pred HcCCcEEEEecCcccCCCCC-------------CceeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCC
Q 022216 220 KSGINYTIIRPGGLRNEPPT-------------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDA 286 (301)
Q Consensus 220 ~~~i~~~~irpg~v~~~~~~-------------~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~ 286 (301)
+.=-..+||||..++|.... ....+..++.....++++-|||.+|+.++.+|.+.|++|+..++
T Consensus 201 dafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP--- 277 (391)
T KOG2865|consen 201 DAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGP--- 277 (391)
T ss_pred hhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCC---
Confidence 76668999999999996321 11233444455556899999999999999999999999999995
Q ss_pred CCcCHHHHHHHhh
Q 022216 287 PKRSYEDLFGSIK 299 (301)
Q Consensus 287 ~~~s~~e~~~~i~ 299 (301)
..+.+.|+++.|-
T Consensus 278 ~~yql~eLvd~my 290 (391)
T KOG2865|consen 278 DRYQLSELVDIMY 290 (391)
T ss_pred chhhHHHHHHHHH
Confidence 9999999999874
No 123
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.5e-23 Score=176.65 Aligned_cols=206 Identities=15% Similarity=0.103 Sum_probs=150.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC--CCCEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAV 139 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~V 139 (301)
+++++++++||||+|+||+++++.|+++|++|++++|+.++.+++.. ..+..++.+|++| .+.+.+.+.. ++|+|
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~v~~~~~~~~~~d~v 81 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG--ETGCEPLRLDVGD-DAAIRAALAAAGAFDGL 81 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCeEEEecCCC-HHHHHHHHHHhCCCCEE
Confidence 34678999999999999999999999999999999998776655432 1246788999999 7777776653 49999
Q ss_pred EEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc----C-CCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 140 VCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR----G-VNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 140 i~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
|||||.... ++++..+++|+.++.++++++.+. + .++||++||...+... .....
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~ 149 (245)
T PRK07060 82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------PDHLA 149 (245)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------CCCcH
Confidence 999996432 234556789999999999988542 2 3699999998754321 12356
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHHhcCCC-
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALLHPE- 272 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l~~~~- 272 (301)
|..+|.++|.+.+ ..+++++.++||.+.++.....+... ........+++++|+|++++.++..+.
T Consensus 150 y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 229 (245)
T PRK07060 150 YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAAS 229 (245)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence 8899999887653 25899999999999998643211100 001122357899999999987776543
Q ss_pred -CCCcEEEeec
Q 022216 273 -SSYKVVEIIS 282 (301)
Q Consensus 273 -~~~~~~~v~~ 282 (301)
..++.+++.+
T Consensus 230 ~~~G~~~~~~~ 240 (245)
T PRK07060 230 MVSGVSLPVDG 240 (245)
T ss_pred CccCcEEeECC
Confidence 3466666654
No 124
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.90 E-value=6e-23 Score=176.82 Aligned_cols=204 Identities=18% Similarity=0.191 Sum_probs=139.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEE-eCCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHh--------
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAI-------- 132 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~-r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~-------- 132 (301)
++|+++||||+|+||++++++|+++|++|++.. |+.+..++.. ......+..+.+|+++ .+++...+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES-LHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC-HHHHHHHHHHHHHHhh
Confidence 579999999999999999999999999998875 4444433221 1123457788999998 54443222
Q ss_pred ---c-CCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcch
Q 022216 133 ---G-DDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY 198 (301)
Q Consensus 133 ---~-~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~ 198 (301)
+ +++|+||||||.... ++|+.++++|+.+++.+++++.+. ..++||++||...+...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL--------- 152 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC---------
Confidence 2 139999999996432 135667789999999999988543 23699999998754221
Q ss_pred hhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHH
Q 022216 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~ 265 (301)
.....|+.+|.+.+.+.+ ..|++++.|.||++.+++........ ........+.+++|+|+++.
T Consensus 153 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 229 (252)
T PRK12747 153 ---PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAA 229 (252)
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHH
Confidence 123678999999886653 35899999999999998643211100 00011234678999999996
Q ss_pred HHhcCCC---CCCcEEEeec
Q 022216 266 EALLHPE---SSYKVVEIIS 282 (301)
Q Consensus 266 ~~l~~~~---~~~~~~~v~~ 282 (301)
.++ ++. ..++++.+.+
T Consensus 230 ~l~-s~~~~~~~G~~i~vdg 248 (252)
T PRK12747 230 FLA-SPDSRWVTGQLIDVSG 248 (252)
T ss_pred HHc-CccccCcCCcEEEecC
Confidence 554 443 2345555543
No 125
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.90 E-value=5.1e-23 Score=176.88 Aligned_cols=192 Identities=19% Similarity=0.194 Sum_probs=138.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhc-------CCCCEE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DDSEAV 139 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~~d~V 139 (301)
|+++||||+|+||.++++.|+++|++|++++|++++.+.+......++.++.+|++| .+++.+.+. + +|+|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~-id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRN-IDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCC-CCEE
Confidence 589999999999999999999999999999999877665443234578899999999 766665543 5 9999
Q ss_pred EEccCCCCC---------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 140 VCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 140 i~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
|||||.... ++++.++++|+.++.++++++ ++.+.++||++||...+.. ......
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~ 146 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP------------YAGGNV 146 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC------------CCCCch
Confidence 999986321 234566899999977777766 4456679999999763311 122457
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccc---cc--cccCCCCHHHHHHHHHHHhcCCC
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE---DT--LYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~---~~--~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
|+.+|.+.+.+.+ ..++++++|+||.+.|+........... .. ....++.++|+|++++.++..+.
T Consensus 147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~ 224 (248)
T PRK10538 147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPA 224 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCC
Confidence 8899999887653 2589999999999986543221010000 00 01235799999999988876554
No 126
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.90 E-value=8.2e-23 Score=175.76 Aligned_cols=207 Identities=16% Similarity=0.103 Sum_probs=148.2
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCC-chhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~-~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++++|||||+|+||++++++|+++|++|++..|+. ....... .....++.++.+|+++ .+++.+.+++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRY 82 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHc
Confidence 4679999999999999999999999999998877643 2222111 1123467788999999 6666555432
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
++|+||||||.... ++++..+++|+.+..++++++.+. ..++||++||...|.. ..+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~ 150 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP------------AYG 150 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC------------CCC
Confidence 38999999996332 123456799999999999988643 2368999999875532 223
Q ss_pred hhHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCceee--------ccccccccCCCCHHHHHHHHHHHhc
Q 022216 204 FGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIM--------ETEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~~~~--------~~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
...|+.+|.+.|.+.+. .+++++.++||.+.++........ .........+++++|+|++++.++.
T Consensus 151 ~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 230 (252)
T PRK06077 151 LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILK 230 (252)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhC
Confidence 57789999999876642 379999999999988753221100 0001122357999999999999887
Q ss_pred CCCCCCcEEEeecC
Q 022216 270 HPESSYKVVEIISR 283 (301)
Q Consensus 270 ~~~~~~~~~~v~~~ 283 (301)
.+...+++|++.++
T Consensus 231 ~~~~~g~~~~i~~g 244 (252)
T PRK06077 231 IESITGQVFVLDSG 244 (252)
T ss_pred ccccCCCeEEecCC
Confidence 66667889998875
No 127
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.90 E-value=1.3e-22 Score=177.32 Aligned_cols=206 Identities=19% Similarity=0.165 Sum_probs=144.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++|+++||||+|+||++++++|+++|++|++++|+.+..++.... ...++.++++|++| .+++.+.+..
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDF 85 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999987655443221 23468899999999 6666554431
Q ss_pred -CCCEEEEccCCCCC-----------------------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccc
Q 022216 135 -DSEAVVCATGFQPG-----------------------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVN 186 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~-----------------------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~ 186 (301)
++|+||||||.... ++++..+++|+.+++.+++++ ++.+.++||++||...+
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 165 (278)
T PRK08277 86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF 165 (278)
T ss_pred CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence 39999999995321 134556789999998777765 34455799999998765
Q ss_pred cccCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc-----------cc
Q 022216 187 GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----------ED 248 (301)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~-----------~~ 248 (301)
... .....|+.+|.+.+.+.+ ..|++++.|+||.+.+++......... ..
T Consensus 166 ~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 233 (278)
T PRK08277 166 TPL------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH 233 (278)
T ss_pred CCC------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhcc
Confidence 321 224568899998887654 258999999999999986432111000 01
Q ss_pred ccccCCCCHHHHHHHHHHHhcCC-C---CCCcEEEeec
Q 022216 249 TLYEGTISRDQVAEVAVEALLHP-E---SSYKVVEIIS 282 (301)
Q Consensus 249 ~~~~~~v~~~Dva~~~~~~l~~~-~---~~~~~~~v~~ 282 (301)
.....+..++|+|++++.++ ++ . ..++++.+.+
T Consensus 234 ~p~~r~~~~~dva~~~~~l~-s~~~~~~~tG~~i~vdg 270 (278)
T PRK08277 234 TPMGRFGKPEELLGTLLWLA-DEKASSFVTGVVLPVDG 270 (278)
T ss_pred CCccCCCCHHHHHHHHHHHc-CccccCCcCCCEEEECC
Confidence 11234568999999996644 44 3 2345555543
No 128
>PRK09135 pteridine reductase; Provisional
Probab=99.90 E-value=1.7e-22 Score=173.28 Aligned_cols=206 Identities=16% Similarity=0.120 Sum_probs=144.8
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhcc----ccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTL----SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
.+++||||||+|+||++++++|+++|++|++++|+..+ .+... ......+.++.+|++| .+++.++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAAF 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999986432 22211 1123468899999999 7777666542
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc---CCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||.... ++++.++++|+.|+.++++++.+. ..+.++++++.... .+.+
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 151 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE------------RPLK 151 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc------------CCCC
Confidence 38999999996432 234567889999999999999532 23567777664311 1234
Q ss_pred hhhHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCceeecc-----ccccccCCCCHHHHHHHHHHHhcC-
Q 022216 203 VFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIMET-----EDTLYEGTISRDQVAEVAVEALLH- 270 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~~~~~~-----~~~~~~~~v~~~Dva~~~~~~l~~- 270 (301)
+...|+.+|.++|.+++. .++++++++||+++|+.....+.... .......+.+++|+|+++..++..
T Consensus 152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (249)
T PRK09135 152 GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADA 231 (249)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 467899999999987742 36999999999999987543211000 011122345799999999655543
Q ss_pred CCCCCcEEEeecC
Q 022216 271 PESSYKVVEIISR 283 (301)
Q Consensus 271 ~~~~~~~~~v~~~ 283 (301)
+...+++|++.++
T Consensus 232 ~~~~g~~~~i~~g 244 (249)
T PRK09135 232 SFITGQILAVDGG 244 (249)
T ss_pred ccccCcEEEECCC
Confidence 2346888999885
No 129
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.4e-22 Score=176.99 Aligned_cols=191 Identities=20% Similarity=0.292 Sum_probs=140.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhc-------CCCCE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DDSEA 138 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~~d~ 138 (301)
+|+|+||||+|+||++++++|+++|++|++++|+++.++++.. .+++++.+|++| .+++.+++. +++|+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---EGLEAFQLDYAE-PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCceEEEccCCC-HHHHHHHHHHHHHHcCCCccE
Confidence 5799999999999999999999999999999999877665542 368889999999 666555443 24899
Q ss_pred EEEccCCCCC--------CCCCCceeeehHHHH----HHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 139 VVCATGFQPG--------WDLFAPWKVDNFGTV----NLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 139 Vi~~Ag~~~~--------~~~~~~~~~N~~g~~----~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
||||||.... ++++.++++|+.|.. .+++.+++.+.++||++||...+.. ......
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~------------~~~~~~ 147 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP------------MKYRGA 147 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC------------CCccch
Confidence 9999986432 123457899999954 4555566777789999999764321 122467
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-------eccc----------------cccccCCCC
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------METE----------------DTLYEGTIS 256 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-------~~~~----------------~~~~~~~v~ 256 (301)
|+.+|.+.+.+.+ ..|+++++|+||.+.+++...... .... .......++
T Consensus 148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T PRK05993 148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLG 227 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCC
Confidence 8999999987653 479999999999999986432110 0000 000011368
Q ss_pred HHHHHHHHHHHhcCCC
Q 022216 257 RDQVAEVAVEALLHPE 272 (301)
Q Consensus 257 ~~Dva~~~~~~l~~~~ 272 (301)
++++|+.++.++.++.
T Consensus 228 ~~~va~~i~~a~~~~~ 243 (277)
T PRK05993 228 PEAVYAVLLHALTAPR 243 (277)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9999999999998764
No 130
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.90 E-value=9.7e-23 Score=174.48 Aligned_cols=206 Identities=15% Similarity=0.121 Sum_probs=144.1
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHh-------cCCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI-------GDDS 136 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~~~ 136 (301)
++++++|||||+|+||++++++|+++|+.|++..|+.+++++.......++.++.+|++| .+++.+.+ .. +
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~-i 81 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEG-V 81 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCC-C
Confidence 467999999999999999999999999999988888777665443334578899999999 76666554 44 9
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|+||||||.... +++...+++|+.++.++++++. +.+.++||++||...+... +. .
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~---------~ 149 (245)
T PRK12936 82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN---PG---------Q 149 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC---CC---------C
Confidence 999999996432 2455678999999999988864 2355799999997543211 11 2
Q ss_pred hHHHHHHHHHHHHH-------HHcCCcEEEEecCcccCCCCCCceeec----cccccccCCCCHHHHHHHHHHHhcCCC-
Q 022216 205 GLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIME----TEDTLYEGTISRDQVAEVAVEALLHPE- 272 (301)
Q Consensus 205 ~~y~~sK~~~e~~~-------~~~~i~~~~irpg~v~~~~~~~~~~~~----~~~~~~~~~v~~~Dva~~~~~~l~~~~- 272 (301)
..|+.+|.+.+.+. ...+++++.|+||++.+++........ ........+.+++|++++++.++..+.
T Consensus 150 ~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~ 229 (245)
T PRK12936 150 ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAA 229 (245)
T ss_pred cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 34666666554433 236899999999999887543211000 001112235689999999976665432
Q ss_pred -CCCcEEEeecC
Q 022216 273 -SSYKVVEIISR 283 (301)
Q Consensus 273 -~~~~~~~v~~~ 283 (301)
..++++++.++
T Consensus 230 ~~~G~~~~~~~g 241 (245)
T PRK12936 230 YVTGQTIHVNGG 241 (245)
T ss_pred CcCCCEEEECCC
Confidence 24677777663
No 131
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.90 E-value=5.1e-23 Score=177.70 Aligned_cols=205 Identities=17% Similarity=0.211 Sum_probs=144.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHh-------c
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAI-------G 133 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~-------~ 133 (301)
+++|++|||||+|+||++++++|+++|++|++++|++...++.... ...++.++.+|++| .+++...+ +
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 4579999999999999999999999999999999987665443321 24568899999999 66665544 4
Q ss_pred CCCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHHc---CCCEEEEecccccccccCCCCCCcchhhc
Q 022216 134 DDSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 134 ~~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
+ +|+||||||.... +++...+++|+.++..+++++.+. ..++||++||...+.. .
T Consensus 82 ~-~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~------------~ 148 (258)
T PRK07890 82 R-VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS------------Q 148 (258)
T ss_pred C-ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC------------C
Confidence 4 9999999986422 234566899999999999998542 2369999999864321 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-------c------c--ccccccCCCCHHH
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-------E------T--EDTLYEGTISRDQ 259 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-------~------~--~~~~~~~~v~~~D 259 (301)
..+..|..+|.+.+.+++ ..++++++|+||+++++.....+.. . . .......+.+++|
T Consensus 149 ~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 228 (258)
T PRK07890 149 PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDE 228 (258)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHH
Confidence 224678899998886654 2589999999999999854321100 0 0 0011223668999
Q ss_pred HHHHHHHHhcCC--CCCCcEEEeec
Q 022216 260 VAEVAVEALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 260 va~~~~~~l~~~--~~~~~~~~v~~ 282 (301)
+|++++.++... ...++++.+.+
T Consensus 229 va~a~~~l~~~~~~~~~G~~i~~~g 253 (258)
T PRK07890 229 VASAVLFLASDLARAITGQTLDVNC 253 (258)
T ss_pred HHHHHHHHcCHhhhCccCcEEEeCC
Confidence 999997666532 23444544433
No 132
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.2e-22 Score=171.82 Aligned_cols=200 Identities=17% Similarity=0.216 Sum_probs=144.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC--CCCEEEEcc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCAT 143 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vi~~A 143 (301)
+|++|||||+|+||+++++.|+++ ++|++++|+.++.+++.. ....++++++|++| .+++.+++.. ++|+|||++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAA-ELPGATPFPVDLTD-PEAIAAAVEQLGRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHH-HhccceEEecCCCC-HHHHHHHHHhcCCCCEEEECC
Confidence 579999999999999999999999 999999998766554432 12468899999999 7888887763 499999999
Q ss_pred CCCCCC--------CCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHH
Q 022216 144 GFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK 211 (301)
Q Consensus 144 g~~~~~--------~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK 211 (301)
|..... ++..++++|+.+..++.+++ ++. .+++|++||...++... ....|+.+|
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~------------~~~~y~~~K 146 (227)
T PRK08219 80 GVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANP------------GWGSYAASK 146 (227)
T ss_pred CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCC------------CCchHHHHH
Confidence 864421 23445788899865555554 444 46999999987653221 235688889
Q ss_pred HHHHHHHHH-----cC-CcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeec
Q 022216 212 LQAEQYIRK-----SG-INYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS 282 (301)
Q Consensus 212 ~~~e~~~~~-----~~-i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~ 282 (301)
.+.+.+++. .+ ++++.|+||.+.++.................+++++|+|++++.++.++. .+.++++.-
T Consensus 147 ~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~-~~~~~~~~~ 222 (227)
T PRK08219 147 FALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP-DAHITEVVV 222 (227)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC-CCccceEEE
Confidence 888765532 34 99999999998876533221111111122357999999999998887764 567788766
No 133
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.90 E-value=6.2e-23 Score=178.86 Aligned_cols=205 Identities=14% Similarity=0.148 Sum_probs=138.2
Q ss_pred ccCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEeCCc---hhhhccccCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 64 ~~~~~vlVtGat--G~iG~~~~~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++|++|||||+ ++||++++++|+++|++|++.+|+.. ..++...+.... .++.+|++| .+++.+.+..
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d-~~~v~~~~~~i~~~ 80 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSK-PEHFKSLAESLKKD 80 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCC-HHHHHHHHHHHHHH
Confidence 468999999997 89999999999999999999888742 222222212223 678999999 6655554422
Q ss_pred --CCCEEEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcch
Q 022216 135 --DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY 198 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~ 198 (301)
++|++|||||+... ++|+.++++|+.+.+.+++++... ..++||++||.+... +.
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~---~~------ 151 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK---YV------ 151 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc---CC------
Confidence 49999999996421 245668899999999999888532 226899999975221 11
Q ss_pred hhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee----ec--cccccccCCCCHHHHHHHHH
Q 022216 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----ME--TEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~----~~--~~~~~~~~~v~~~Dva~~~~ 265 (301)
..+..|..+|.+.+.+.+ .+|++++.|.||++.+++...... .. ........+..++|+|++++
T Consensus 152 ---~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~ 228 (274)
T PRK08415 152 ---PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGM 228 (274)
T ss_pred ---CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHH
Confidence 124568888888876543 368999999999999875321100 00 00111234578999999996
Q ss_pred HHhcCCC--CCCcEEEeec
Q 022216 266 EALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 266 ~~l~~~~--~~~~~~~v~~ 282 (301)
.++.... ..++++.+.+
T Consensus 229 fL~s~~~~~itG~~i~vdG 247 (274)
T PRK08415 229 YLLSDLSSGVTGEIHYVDA 247 (274)
T ss_pred HHhhhhhhcccccEEEEcC
Confidence 6654322 3444554443
No 134
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.90 E-value=2.7e-22 Score=176.55 Aligned_cols=193 Identities=18% Similarity=0.191 Sum_probs=143.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
..+++|+++||||+|+||+++++.|+++|++|++++|+.+.+++.... ....+.++.+|++| .+++.+.+..
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 114 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKR 114 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999998765543321 23467899999999 7766666551
Q ss_pred --CCCEEEEccCCCCCC----------CCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcch
Q 022216 135 --DSEAVVCATGFQPGW----------DLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAY 198 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~~----------~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~ 198 (301)
++|+||||||..... +++..+++|+.|..++++++ ++.+.++||++||.+.+....
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 186 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS-------- 186 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--------
Confidence 399999999965321 22346789999998888876 355668999999976443110
Q ss_pred hhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.....|+.+|.+.+.+.+ ..|++++.|+||.+.+++....... .....++++++|+.++.++.++
T Consensus 187 ---p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-----~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 187 ---PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-----DGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-----cCCCCCCHHHHHHHHHHHHhcC
Confidence 123678999999876543 3589999999999999875432111 1123579999999999999865
No 135
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.2e-22 Score=175.50 Aligned_cols=206 Identities=15% Similarity=0.099 Sum_probs=144.6
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCC-chhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~-~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
.+|++|||||+|+||++++++|+++|++|+++.++. +..+.... ....++.++.+|++| .+++.+++.+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999998877653 33322211 124568899999999 6666665532
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc----CCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR----GVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~----~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||.... ++++.++++|+.+++++++++.+. +.+++|+++|...+... .
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~------------p 154 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN------------P 154 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC------------C
Confidence 38999999986432 234567899999999999988542 34689998886533211 1
Q ss_pred hhhHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCc--eeeccccccccCCCCHHHHHHHHHHHhcCCCCC
Q 022216 203 VFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGN--IIMETEDTLYEGTISRDQVAEVAVEALLHPESS 274 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~--~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~ 274 (301)
.+..|+.+|.+.|.+.+. .+++++.|+||.+.+...... +.............+++|+|++++.++..+...
T Consensus 155 ~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 234 (258)
T PRK09134 155 DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAPSVT 234 (258)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcC
Confidence 135799999988866542 249999999999887542111 000000111223578999999999999877667
Q ss_pred CcEEEeecC
Q 022216 275 YKVVEIISR 283 (301)
Q Consensus 275 ~~~~~v~~~ 283 (301)
++.+.+.++
T Consensus 235 g~~~~i~gg 243 (258)
T PRK09134 235 GQMIAVDGG 243 (258)
T ss_pred CCEEEECCC
Confidence 778877764
No 136
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.8e-22 Score=177.42 Aligned_cols=208 Identities=15% Similarity=0.141 Sum_probs=147.6
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhc---cccCCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
..+++|++|||||+|+||.+++++|+++|++|+++.|+... .+.. ......++.++.+|++| .+.+.+.+..
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~ 120 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVR 120 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999887543 2211 11134568899999999 7666665532
Q ss_pred ---CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 ---DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... +++...+++|+.++.++++++.+. ..++||++||...|.....
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~--------- 191 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET--------- 191 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC---------
Confidence 38999999996421 134567899999999999998653 2368999999876643211
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-----ccccccccCCCCHHHHHHHHHHHh
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-----~~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
...|..+|.+.+.+.+ ..|++++.|+||.+.++........ .........+.+++|+|++++.++
T Consensus 192 ---~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll 268 (290)
T PRK06701 192 ---LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLA 268 (290)
T ss_pred ---cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHc
Confidence 2457788888876543 3589999999999999864322110 001112234788999999997777
Q ss_pred cCCC--CCCcEEEeec
Q 022216 269 LHPE--SSYKVVEIIS 282 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~ 282 (301)
.... ..+.++++.+
T Consensus 269 ~~~~~~~~G~~i~idg 284 (290)
T PRK06701 269 SPDSSYITGQMLHVNG 284 (290)
T ss_pred CcccCCccCcEEEeCC
Confidence 6432 3466676665
No 137
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.90 E-value=1.2e-22 Score=174.86 Aligned_cols=188 Identities=14% Similarity=0.151 Sum_probs=138.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
.+++|++|||||+|+||++++++|+++|++|++++|+. .. ....++.++++|++| .+++.+.+.+ ++
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~----~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LT----QEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hh----hcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999999876 11 134578899999999 7666665532 38
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|+||||||.... +++...+++|+.++.++++++. +.+.++||++||...... ...+
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~------------~~~~ 145 (252)
T PRK08220 78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP------------RIGM 145 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC------------CCCC
Confidence 999999996432 2345678899999999999874 345579999999753211 1224
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec--------------cccccccCCCCHHHHHHH
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME--------------TEDTLYEGTISRDQVAEV 263 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~--------------~~~~~~~~~v~~~Dva~~ 263 (301)
..|+.+|.+.+.+.+ .+|+++++|+||.+.|+......... ........+.+++|+|++
T Consensus 146 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 225 (252)
T PRK08220 146 AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANA 225 (252)
T ss_pred chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHH
Confidence 678889998886553 36899999999999998643211000 001122357899999999
Q ss_pred HHHHhc
Q 022216 264 AVEALL 269 (301)
Q Consensus 264 ~~~~l~ 269 (301)
++.++.
T Consensus 226 ~~~l~~ 231 (252)
T PRK08220 226 VLFLAS 231 (252)
T ss_pred HHHHhc
Confidence 976664
No 138
>PRK12320 hypothetical protein; Provisional
Probab=99.90 E-value=2.3e-22 Score=191.95 Aligned_cols=194 Identities=20% Similarity=0.243 Sum_probs=146.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~ 146 (301)
|+||||||+||||++++++|+++|++|++++|.+... ...+++++.+|++| . .+.+++.+ +|+|||+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d-~-~l~~al~~-~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------LDPRVDYVCASLRN-P-VLQELAGE-ADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------ccCCceEEEccCCC-H-HHHHHhcC-CCEEEEcCccC
Confidence 5799999999999999999999999999999875431 22478899999999 5 47788888 99999999864
Q ss_pred CCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEE
Q 022216 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (301)
Q Consensus 147 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~ 226 (301)
... ..++|+.|+.|++++|++.++ ++|++||.. |.. .. |. .+|.++..++++++
T Consensus 72 ~~~----~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~--G~~------~~---------~~----~aE~ll~~~~~p~~ 125 (699)
T PRK12320 72 TSA----PGGVGITGLAHVANAAARAGA-RLLFVSQAA--GRP------EL---------YR----QAETLVSTGWAPSL 125 (699)
T ss_pred ccc----hhhHHHHHHHHHHHHHHHcCC-eEEEEECCC--CCC------cc---------cc----HHHHHHHhcCCCEE
Confidence 321 235899999999999999997 899999862 311 00 11 46777777789999
Q ss_pred EEecCcccCCCCCCc---eeec----cccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhh
Q 022216 227 IIRPGGLRNEPPTGN---IIME----TEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK 299 (301)
Q Consensus 227 ~irpg~v~~~~~~~~---~~~~----~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~ 299 (301)
++|++++||+..... +... ........++|++|++++++.++..+. ..+||++++ +.+|+.|+++.+.
T Consensus 126 ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~---~~~Si~el~~~i~ 200 (699)
T PRK12320 126 VIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATP---DTTNVVTAWRLLR 200 (699)
T ss_pred EEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCC---CeeEHHHHHHHHH
Confidence 999999999854321 1100 000111124699999999988887653 349999996 9999999988875
Q ss_pred c
Q 022216 300 Q 300 (301)
Q Consensus 300 ~ 300 (301)
.
T Consensus 201 ~ 201 (699)
T PRK12320 201 S 201 (699)
T ss_pred H
Confidence 3
No 139
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.1e-22 Score=175.19 Aligned_cols=202 Identities=15% Similarity=0.095 Sum_probs=143.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
++++|++|||||+|+||++++++|+++|++|++++|+.+.. ....++.++++|++| .+++.+.+.. ++
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 76 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-----VDGRPAEFHAADVRD-PDQVAALVDAIVERHGRL 76 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-----hcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999999986541 133578899999999 6666665532 38
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH-----cCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK-----RGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~-----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
|+||||||.... ++++..+++|+.++.++++++.+ .+.++||++||...+... ..
T Consensus 77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~ 144 (252)
T PRK07856 77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS------------PG 144 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC------------CC
Confidence 999999996432 23456789999999999998853 234799999998643211 12
Q ss_pred hhHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHHhcCC
Q 022216 204 FGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
+..|..+|.+.+.+.+. ..++++.|+||.+.+++........ ........+..++|+|++++.++...
T Consensus 145 ~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~ 224 (252)
T PRK07856 145 TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDL 224 (252)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 46788999999876642 2389999999999988643211000 00011223568999999997665432
Q ss_pred C--CCCcEEEeec
Q 022216 272 E--SSYKVVEIIS 282 (301)
Q Consensus 272 ~--~~~~~~~v~~ 282 (301)
. ..++.+.+.+
T Consensus 225 ~~~i~G~~i~vdg 237 (252)
T PRK07856 225 ASYVSGANLEVHG 237 (252)
T ss_pred cCCccCCEEEECC
Confidence 2 3455666654
No 140
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.90 E-value=2.5e-22 Score=172.29 Aligned_cols=206 Identities=16% Similarity=0.137 Sum_probs=145.0
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCC----chhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC--
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL----DKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~----~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~-- 134 (301)
+++|++|||||+|+||+++++.|+++|++|+++.|.. +..++.. .....++.++.+|++| .+++.+.+..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~ 82 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRD-FAATRAALDAGV 82 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHH
Confidence 4578999999999999999999999999999877643 2222211 1124578899999999 7666665531
Q ss_pred ----CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH-----HcCCCEEEEecccccccccCCCCCCcc
Q 022216 135 ----DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR-----KRGVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 ----~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~-----~~~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|+||||||.... +++...+++|+.++.++++++. +.+.++||++||...+...
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 154 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-------- 154 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC--------
Confidence 39999999997542 1344567899999999999987 4556799999998754321
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc--ccccccCCCCHHHHHHHHHHHh
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET--EDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~--~~~~~~~~v~~~Dva~~~~~~l 268 (301)
..+..|..+|.+.+.+.+ ..++++++|+||++.++.......... .......+.+++|+|++++.++
T Consensus 155 ----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 230 (249)
T PRK12827 155 ----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLV 230 (249)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHc
Confidence 123567888888775543 258999999999999986543321100 0111122458999999997777
Q ss_pred cCCC--CCCcEEEeec
Q 022216 269 LHPE--SSYKVVEIIS 282 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~ 282 (301)
.... ..++.+++.+
T Consensus 231 ~~~~~~~~g~~~~~~~ 246 (249)
T PRK12827 231 SDAASYVTGQVIPVDG 246 (249)
T ss_pred CcccCCccCcEEEeCC
Confidence 5432 3466777765
No 141
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.90 E-value=1.3e-22 Score=175.13 Aligned_cols=209 Identities=17% Similarity=0.171 Sum_probs=148.3
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++++|+||||||+|+||++++++|+++|++|++++|+....++... ....++.++.+|++| .+++.+++..
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~ 85 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSK 85 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999988765543321 123468889999999 7666554432
Q ss_pred --CCCEEEEccCCCCC-------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 --DSEAVVCATGFQPG-------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~-------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||.... ++++..+++|+.++.++++++. +.+.++||++||..... + .
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---~---------~ 153 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN---K---------N 153 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC---C---------C
Confidence 38999999996432 2344557899999999999985 33446999999986321 1 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec-----cccccccCCCCHHHHHHHHHHHhc
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~-----~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
..+..|+.+|.+.+.+.+ ..|+++++|.||.+.+++........ ........+.+++|++++++.++.
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 233 (255)
T PRK06113 154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCS 233 (255)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 224568899999887664 35899999999999998644321000 001112335789999999977664
Q ss_pred CCC--CCCcEEEeecC
Q 022216 270 HPE--SSYKVVEIISR 283 (301)
Q Consensus 270 ~~~--~~~~~~~v~~~ 283 (301)
... ..++++++.++
T Consensus 234 ~~~~~~~G~~i~~~gg 249 (255)
T PRK06113 234 PAASWVSGQILTVSGG 249 (255)
T ss_pred ccccCccCCEEEECCC
Confidence 322 24667776664
No 142
>PRK12742 oxidoreductase; Provisional
Probab=99.90 E-value=9.7e-23 Score=173.75 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=140.1
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeC-CchhhhccccCCCCeEEEEccCCCChHhHHHHhcC--CCCEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV 140 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vi 140 (301)
+++|+||||||+|+||++++++|+++|++|+++.|+ .+..+++.. ..++.++.+|++| .+++.+.+.. ++|+||
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~--~~~~~~~~~D~~~-~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ--ETGATAVQTDSAD-RDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH--HhCCeEEecCCCC-HHHHHHHHHHhCCCcEEE
Confidence 468999999999999999999999999999887664 333333322 1246788999999 6666665543 499999
Q ss_pred EccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHHHHH
Q 022216 141 CATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (301)
Q Consensus 141 ~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s 210 (301)
||||.... ++++..+++|+.+++++++.+.+. ..+++|++||.... .. +......|+.+
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~--~~---------~~~~~~~Y~~s 149 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD--RM---------PVAGMAAYAAS 149 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc--cC---------CCCCCcchHHh
Confidence 99986432 235667899999999998777543 24699999997531 10 11234678899
Q ss_pred HHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc---ccccccCCCCHHHHHHHHHHHhcCCC--CCCcEE
Q 022216 211 KLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET---EDTLYEGTISRDQVAEVAVEALLHPE--SSYKVV 278 (301)
Q Consensus 211 K~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~---~~~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~ 278 (301)
|.+.+.+.+ ..|+++++|+||.+.+++......... .......+.+++|+|+++..++.... ..+.++
T Consensus 150 Kaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~ 229 (237)
T PRK12742 150 KSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMH 229 (237)
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEE
Confidence 999987653 358999999999999986432211000 01112346789999999865553322 234444
Q ss_pred Eee
Q 022216 279 EII 281 (301)
Q Consensus 279 ~v~ 281 (301)
.+.
T Consensus 230 ~~d 232 (237)
T PRK12742 230 TID 232 (237)
T ss_pred EeC
Confidence 443
No 143
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.90 E-value=1.1e-22 Score=175.16 Aligned_cols=206 Identities=16% Similarity=0.141 Sum_probs=143.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeC-CchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-------C
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-------D 135 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------~ 135 (301)
+++|++|||||+|+||+++++.|+++|++|+++.++ .+..+.+......++.++++|++| .+++.+++.+ +
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999887654 333333322223578899999999 7777666543 3
Q ss_pred CCEEEEccCCCCC--------------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcc
Q 022216 136 SEAVVCATGFQPG--------------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
+|+||||||.... +++...+++|+.++.++++++. +.+.++||++||.....
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------- 151 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN---------- 151 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----------
Confidence 9999999985310 1234568999999999999984 34457999999964221
Q ss_pred hhhcchhhHHHHHHHHHHHHHHH-------cCCcEEEEecCcccCCCCCCceee-----ccccccccCCCCHHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~irpg~v~~~~~~~~~~~-----~~~~~~~~~~v~~~Dva~~~~ 265 (301)
+..++..|+.+|.+.+.+++. .|++++.|+||++.++........ .........+.+++|+|+++.
T Consensus 152 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 229 (253)
T PRK08642 152 --PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVL 229 (253)
T ss_pred --CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence 112346799999999977652 589999999999988743221100 001112234789999999997
Q ss_pred HHhcCC--CCCCcEEEeec
Q 022216 266 EALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 266 ~~l~~~--~~~~~~~~v~~ 282 (301)
.++..+ ...|+++.+.+
T Consensus 230 ~l~~~~~~~~~G~~~~vdg 248 (253)
T PRK08642 230 FFASPWARAVTGQNLVVDG 248 (253)
T ss_pred HHcCchhcCccCCEEEeCC
Confidence 766533 24455555544
No 144
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.90 E-value=9.5e-23 Score=176.31 Aligned_cols=198 Identities=17% Similarity=0.190 Sum_probs=135.7
Q ss_pred cccCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEeCCch------hhhccccCCCCeEEEEccCCCChHhHHHHhcC
Q 022216 63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDK------AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD 134 (301)
Q Consensus 63 ~~~~~~vlVtGat--G~iG~~~~~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 134 (301)
++++|+++||||+ ++||++++++|+++|++|++..|+.+. .+++.. ....+.++.+|++| .+++.+.+..
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d-~~~v~~~~~~ 80 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQD-DAQIEETFET 80 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCC-HHHHHHHHHH
Confidence 3568999999986 899999999999999999887664331 222211 22356788999999 6666654432
Q ss_pred ------CCCEEEEccCCCC------------CCCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCC
Q 022216 135 ------DSEAVVCATGFQP------------GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQIL 194 (301)
Q Consensus 135 ------~~d~Vi~~Ag~~~------------~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~ 194 (301)
++|++|||||+.. .++|+..+++|+.+++.+++++.+. ..++||++||.... .+
T Consensus 81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~---~~--- 154 (258)
T PRK07370 81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV---RA--- 154 (258)
T ss_pred HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc---cC---
Confidence 4999999999642 1246778999999999999987431 12699999997522 11
Q ss_pred CcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCc-----eeec-cccccccCCCCHHHHH
Q 022216 195 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN-----IIME-TEDTLYEGTISRDQVA 261 (301)
Q Consensus 195 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~-----~~~~-~~~~~~~~~v~~~Dva 261 (301)
...+..|+.+|.+.+.+.+ ..||+++.|.||.+.+++.... .... ........+..++|+|
T Consensus 155 ------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva 228 (258)
T PRK07370 155 ------IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVG 228 (258)
T ss_pred ------CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHH
Confidence 1224678899998886654 3689999999999999853211 0000 0011122356899999
Q ss_pred HHHHHHhcCCCCCC
Q 022216 262 EVAVEALLHPESSY 275 (301)
Q Consensus 262 ~~~~~~l~~~~~~~ 275 (301)
+++..++ ++...+
T Consensus 229 ~~~~fl~-s~~~~~ 241 (258)
T PRK07370 229 NTAAFLL-SDLASG 241 (258)
T ss_pred HHHHHHh-Chhhcc
Confidence 9996554 444333
No 145
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1e-22 Score=179.53 Aligned_cols=196 Identities=18% Similarity=0.148 Sum_probs=144.0
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccC--CCCeEEEEccCCCChHhHHHHhcC------
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++++++|||||+|+||.++++.|+++|++|++++|+.++++++.... ...+..+.+|++| .+++.+.+.+
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999999887766543322 2456667799999 6666555431
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc---CCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
++|+||||||.... ++++.++++|+.|+.++++++... +.++||++||...+... ..
T Consensus 85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~ 152 (296)
T PRK05872 85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA------------PG 152 (296)
T ss_pred CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC------------CC
Confidence 49999999997432 234567899999999999988432 23699999998754321 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-------cc-ccccccCCCCHHHHHHHHHHHh
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-------ET-EDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-------~~-~~~~~~~~v~~~Dva~~~~~~l 268 (301)
...|+.+|...+.+.+ ..|++++.+.||++.+++....... .. .......+++++|+|++++.++
T Consensus 153 ~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~ 232 (296)
T PRK05872 153 MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGI 232 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHH
Confidence 4678899999887653 3689999999999999864432110 00 0111234678999999998888
Q ss_pred cCC
Q 022216 269 LHP 271 (301)
Q Consensus 269 ~~~ 271 (301)
...
T Consensus 233 ~~~ 235 (296)
T PRK05872 233 ERR 235 (296)
T ss_pred hcC
Confidence 754
No 146
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.90 E-value=1.3e-22 Score=174.99 Aligned_cols=206 Identities=14% Similarity=0.066 Sum_probs=142.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhccccCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++++|++|||||+|+||++++++|++.|++|+++++.... ..+........+..+++|++| .+++.+.+..
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFG 84 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 35678999999999999999999999999999987765421 111111134567889999999 6666655532
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|++|||||.... ++|+.++++|+.++.++++++.+ .+ .++||++||...+....
T Consensus 85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 153 (253)
T PRK08993 85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI----------- 153 (253)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-----------
Confidence 49999999996432 34667889999999999998743 22 36899999987654221
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHHh
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
....|+.+|.+.+.+.+ +.|++++.|+||++.+++........ ........+..++|+|+.++.++
T Consensus 154 -~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~ 232 (253)
T PRK08993 154 -RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLA 232 (253)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 12467888988876553 36899999999999998643210000 00011234678999999997666
Q ss_pred cCCC--CCCcEEEe
Q 022216 269 LHPE--SSYKVVEI 280 (301)
Q Consensus 269 ~~~~--~~~~~~~v 280 (301)
.... ..++++.+
T Consensus 233 s~~~~~~~G~~~~~ 246 (253)
T PRK08993 233 SSASDYINGYTIAV 246 (253)
T ss_pred CccccCccCcEEEE
Confidence 4332 23444444
No 147
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.89 E-value=9.9e-23 Score=176.45 Aligned_cols=208 Identities=16% Similarity=0.151 Sum_probs=147.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-CCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
.++++++|||||+|+||+++++.|+++|++|++++|+.+..+++... ...++.++.+|++| ++++.+++.. +
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERFGG 86 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence 35689999999999999999999999999999999987665543321 12267889999999 7666665531 3
Q ss_pred CCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHH----HcCC-CEEEEecccccccccCCCCCCcchhhc
Q 022216 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRGV-NRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~----~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
+|+|||+||.... +++..++++|+.++.++++++. +.+. ++||++||...+. +.
T Consensus 87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~---~~--------- 154 (264)
T PRK12829 87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL---GY--------- 154 (264)
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc---CC---------
Confidence 9999999997521 2345678999999999988873 3344 5788888865321 11
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee----------ec---c--ccccccCCCCHHH
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----------ME---T--EDTLYEGTISRDQ 259 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~----------~~---~--~~~~~~~~v~~~D 259 (301)
.....|+.+|.+.|.+++ ..++++++||||+++|++...... .. . .......+++++|
T Consensus 155 ~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (264)
T PRK12829 155 PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPED 234 (264)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHH
Confidence 123568889998887654 258999999999999986432210 00 0 0011224789999
Q ss_pred HHHHHHHHhcCC--CCCCcEEEeecC
Q 022216 260 VAEVAVEALLHP--ESSYKVVEIISR 283 (301)
Q Consensus 260 va~~~~~~l~~~--~~~~~~~~v~~~ 283 (301)
+|+++..++... ...++.+++.++
T Consensus 235 ~a~~~~~l~~~~~~~~~g~~~~i~~g 260 (264)
T PRK12829 235 IAATALFLASPAARYITGQAISVDGN 260 (264)
T ss_pred HHHHHHHHcCccccCccCcEEEeCCC
Confidence 999997776532 235778888875
No 148
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.1e-22 Score=182.06 Aligned_cols=196 Identities=16% Similarity=0.146 Sum_probs=141.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
.+++++|+||||+|+||++++++|+++|++|++++|+.+++++... ....++.++.+|++| .+++.+++..
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHC
Confidence 3568999999999999999999999999999999998776554332 134578899999999 7666655431
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|++|||||.... ++++..+++|+.|..++++++ ++.+.++||++||...|...
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~------------ 151 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI------------ 151 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC------------
Confidence 39999999996432 234567889988877766555 45556799999999765322
Q ss_pred chhhHHHHHHHHHHHHHH---------HcCCcEEEEecCcccCCCCCCce-eeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 202 NVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGNI-IMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~---------~~~i~~~~irpg~v~~~~~~~~~-~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.....|..+|.+.+.+.+ ..++++++|+||.+.++...... .............+++|+|++++.++.++
T Consensus 152 ~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 152 PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 123568888888765442 14699999999999988532210 11111122234678999999999988776
No 149
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.89 E-value=2.1e-22 Score=172.76 Aligned_cols=207 Identities=18% Similarity=0.127 Sum_probs=146.0
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeC-Cchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~-~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++++|||||+|+||++++++|+++|++|+++.++ ++..++.. .....++.++.+|++| .+++.+++..
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF 82 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 457999999999999999999999999999876543 33333221 1133568899999999 7666665543
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||.... ++++..+++|+.++.++++++.. .+.++||++||...+...
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 150 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG------------ 150 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC------------
Confidence 48999999997432 23456689999999999999853 345799999997543211
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee----ccccccccCCCCHHHHHHHHHHHhcC
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ETEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~----~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
.+...|..+|.+.+.+.+ ..++++++++||.+.++........ .........+.+++|++++++.++..
T Consensus 151 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~ 230 (247)
T PRK12935 151 FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD 230 (247)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc
Confidence 124578899998776543 2589999999999988753321100 00011123478999999999777754
Q ss_pred CC-CCCcEEEeecC
Q 022216 271 PE-SSYKVVEIISR 283 (301)
Q Consensus 271 ~~-~~~~~~~v~~~ 283 (301)
.. ..++++++.++
T Consensus 231 ~~~~~g~~~~i~~g 244 (247)
T PRK12935 231 GAYITGQQLNINGG 244 (247)
T ss_pred ccCccCCEEEeCCC
Confidence 32 45778888774
No 150
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.89 E-value=2e-22 Score=172.12 Aligned_cols=192 Identities=19% Similarity=0.185 Sum_probs=142.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++++++||||+|+||++++++|+++|++|++++|++++.++... ....++.++.+|+++ .+++.+.++.
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELG 83 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999999998765543321 134578899999999 7777666541
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||.... ++++..+++|+.++.++++++. +.+.+++|++||...+... .
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------~ 151 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA------------A 151 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC------------C
Confidence 39999999986432 2235568999999999988875 3456799999998644321 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
....|+.+|.+.+.+++ +.|+++++|+||.+.+++....... ......+++++|+|+.++.++..+
T Consensus 152 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 152 VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT---DGNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc---ccCCCCCCCHHHHHHHHHHHHhCC
Confidence 23557888887765542 3689999999999999865432111 111234689999999999988765
No 151
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=1.7e-22 Score=175.99 Aligned_cols=205 Identities=18% Similarity=0.155 Sum_probs=138.1
Q ss_pred cccCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEeCCchh---hhccccCCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKA---KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG--~iG~~~~~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
.+++|++|||||++ +||++++++|+++|++|++.+|+.... +++..+. ....++++|++| .+++.+.+..
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-g~~~~~~~Dv~d-~~~v~~~~~~~~~ 81 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL-GSDFVLPCDVED-IASVDAVFEALEK 81 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc-CCceEEeCCCCC-HHHHHHHHHHHHH
Confidence 35789999999997 999999999999999999988875322 2221111 223578999999 6666554422
Q ss_pred ---CCCEEEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcc
Q 022216 135 ---DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|++|||||.... ++|+..+++|+.+++++++++... ..++||++||.+... +
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~---~------ 152 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR---V------ 152 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc---c------
Confidence 49999999996421 346677899999999998887432 226899999975321 1
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee------eccccccccCCCCHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII------METEDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~------~~~~~~~~~~~v~~~Dva~~~ 264 (301)
...+..|..+|.+.+.+.+ .+||+++.|.||.+.+++...... ..........+..++|+|+++
T Consensus 153 ---~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~ 229 (271)
T PRK06505 153 ---MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSA 229 (271)
T ss_pred ---CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHH
Confidence 1124568888888876543 368999999999999986421100 000011122356899999999
Q ss_pred HHHhcCCCC---CCcEEEeec
Q 022216 265 VEALLHPES---SYKVVEIIS 282 (301)
Q Consensus 265 ~~~l~~~~~---~~~~~~v~~ 282 (301)
+.++. +.. .++++.+.+
T Consensus 230 ~fL~s-~~~~~itG~~i~vdg 249 (271)
T PRK06505 230 LYLLS-DLSSGVTGEIHFVDS 249 (271)
T ss_pred HHHhC-ccccccCceEEeecC
Confidence 66554 433 344444443
No 152
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.1e-22 Score=175.08 Aligned_cols=208 Identities=13% Similarity=0.142 Sum_probs=146.3
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++++|++|||||+|+||.+++++|+++|++|++++|+.+..+++... ...++.++++|++| .+++.+++..
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 82 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRER 82 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999987665543321 23467889999999 6655554432
Q ss_pred --CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchh
Q 022216 135 --DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
++|+||||||.... ++++..+++|+.+...+++++ ++.+.+++|++||...+..
T Consensus 83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 151 (252)
T PRK07035 83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP----------- 151 (252)
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------
Confidence 39999999985321 234567899999999888777 3445679999999753321
Q ss_pred hcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~ 266 (301)
...++.|+.+|.+.+.+.+ ..|++++.|.||.+.+++........ ........+..++|+|++++.
T Consensus 152 -~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 230 (252)
T PRK07035 152 -GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLY 230 (252)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHH
Confidence 1234678999999987664 35899999999999987643221100 001112346789999999966
Q ss_pred HhcCCC--CCCcEEEeec
Q 022216 267 ALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 267 ~l~~~~--~~~~~~~v~~ 282 (301)
++.... ..++++.+.+
T Consensus 231 l~~~~~~~~~g~~~~~dg 248 (252)
T PRK07035 231 LASDASSYTTGECLNVDG 248 (252)
T ss_pred HhCccccCccCCEEEeCC
Confidence 554332 3455555543
No 153
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.89 E-value=3e-22 Score=172.67 Aligned_cols=205 Identities=17% Similarity=0.135 Sum_probs=142.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhc---cccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
.|++|||||+|+||++++++|+++|++|++++|+... .++. ......++.++.+|++| .+++.+.+.. +
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 3789999999999999999999999999999987532 2211 11133578999999999 6665554431 3
Q ss_pred CCEEEEccCCCCC----------CCCCCceeeehHHHHHHHHHHHHc-----C-----CCEEEEecccccccccCCCCCC
Q 022216 136 SEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEACRKR-----G-----VNRFILISSILVNGAAMGQILN 195 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~~~-----~-----~~~iV~~SS~~~~~~~~~~~~~ 195 (301)
+|+||||||.... ++++..+++|+.++.++++++.+. + .++||++||...+...
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 154 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS------ 154 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC------
Confidence 9999999986421 234556899999999999988432 1 4679999998654221
Q ss_pred cchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee-----ccccccccCCCCHHHHHHH
Q 022216 196 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEV 263 (301)
Q Consensus 196 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~-----~~~~~~~~~~v~~~Dva~~ 263 (301)
...+.|+.+|.+.|.+.+ .+|+++++|+||.+.++........ .........+.+++|++++
T Consensus 155 ------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~ 228 (256)
T PRK12745 155 ------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARA 228 (256)
T ss_pred ------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHH
Confidence 123568888988876543 3689999999999998764321100 0001112346689999999
Q ss_pred HHHHhcCCC--CCCcEEEeecC
Q 022216 264 AVEALLHPE--SSYKVVEIISR 283 (301)
Q Consensus 264 ~~~~l~~~~--~~~~~~~v~~~ 283 (301)
+..++.... ..+.+|++.++
T Consensus 229 i~~l~~~~~~~~~G~~~~i~gg 250 (256)
T PRK12745 229 VAALASGDLPYSTGQAIHVDGG 250 (256)
T ss_pred HHHHhCCcccccCCCEEEECCC
Confidence 876664332 34677888664
No 154
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=2.5e-22 Score=171.53 Aligned_cols=196 Identities=19% Similarity=0.265 Sum_probs=140.6
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc----ccCCC-CeEEEEccCCCChHhHHHH-----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNP-SLQIVKADVTEGSAKLSEA----- 131 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~-~~~~~~~Dl~~~~~~~~~~----- 131 (301)
..+.+|+|+|||||+|||.++|.+|+++|.+++++.|....++... ..... ++.++++|++| .+++.+.
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAI 86 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHH
Confidence 4568999999999999999999999999999888888776665542 11223 59999999999 7777644
Q ss_pred --hcCCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcc
Q 022216 132 --IGDDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 132 --~~~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
|++ +|++|||||.... .+....+++|+.|+..+.+++ ++.+-++||.+||+..+- ..|
T Consensus 87 ~~fg~-vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~---~~P---- 158 (282)
T KOG1205|consen 87 RHFGR-VDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM---PLP---- 158 (282)
T ss_pred HhcCC-CCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc---CCC----
Confidence 455 9999999997542 234568899999999988887 445558999999997321 111
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcC--CcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHH--HHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSG--INYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAE--VAVE 266 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~--i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~--~~~~ 266 (301)
....|.+||.+.+.+.+ ..+ +.+ .|.||+|.|....+.................+|++. .+..
T Consensus 159 -----~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T KOG1205|consen 159 -----FRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLGEEGKSQQGPFLRTEDVADPEAVAY 232 (282)
T ss_pred -----cccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhccccccccccchhhhhhhhhHHHHHH
Confidence 12377899999987653 233 333 699999999876665544333222223455666654 6767
Q ss_pred HhcCCC
Q 022216 267 ALLHPE 272 (301)
Q Consensus 267 ~l~~~~ 272 (301)
.+..+.
T Consensus 233 ~i~~~~ 238 (282)
T KOG1205|consen 233 AISTPP 238 (282)
T ss_pred HHhcCc
Confidence 776664
No 155
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.89 E-value=2e-22 Score=174.30 Aligned_cols=211 Identities=18% Similarity=0.164 Sum_probs=147.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++|++|||||+|+||+++++.|+++|++|++++|+.++.+.... ....++.++.+|++| .+++.+.+..
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERF 87 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999998766544321 133568889999999 7666544431
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc-----CCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR-----GVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... +++..++++|+.++.++++++.+. +.++||++||...+....+.
T Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------- 159 (259)
T PRK08213 88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------- 159 (259)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc--------
Confidence 39999999986321 234556789999999999987543 56799999998654322111
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee---c-cccccccCCCCHHHHHHHHHHHhc
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---E-TEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~---~-~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
..+...|..+|.+.+.+++ .+|+++++++||.+.++...+.... . ........+..++|+|+++..++.
T Consensus 160 ~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 239 (259)
T PRK08213 160 VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLAS 239 (259)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 1224678899999987664 2589999999999988754322110 0 001111234578999999866654
Q ss_pred CC--CCCCcEEEeec
Q 022216 270 HP--ESSYKVVEIIS 282 (301)
Q Consensus 270 ~~--~~~~~~~~v~~ 282 (301)
.. ...|+.+++.+
T Consensus 240 ~~~~~~~G~~~~~~~ 254 (259)
T PRK08213 240 DASKHITGQILAVDG 254 (259)
T ss_pred ccccCccCCEEEECC
Confidence 32 23566666655
No 156
>PRK08643 acetoin reductase; Validated
Probab=99.89 E-value=1.3e-22 Score=174.98 Aligned_cols=204 Identities=18% Similarity=0.168 Sum_probs=140.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
+|++|||||+|+||+++++.|+++|++|++++|+.+..++.... ...++.++++|++| ++++.+.+.. ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999999999999987665443321 23578889999999 6666555432 39
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEecccccccccCCCCCCcchhhcch
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
|+||||||+... ++++..+++|+.++..+++++.+ .+ .++||++||...+... ..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~ 148 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN------------PE 148 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC------------CC
Confidence 999999986432 12455688999999888887743 22 3689999997643211 11
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-----ec----------cccccccCCCCHHHHH
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----ME----------TEDTLYEGTISRDQVA 261 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-----~~----------~~~~~~~~~v~~~Dva 261 (301)
...|+.+|.+.+.+.+ ..|++++.|+||++.+++...... .. ........+.+++|+|
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 228 (256)
T PRK08643 149 LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVA 228 (256)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHH
Confidence 3568889988876553 368999999999999886432110 00 0011122356899999
Q ss_pred HHHHHHhcCCC--CCCcEEEeec
Q 022216 262 EVAVEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 262 ~~~~~~l~~~~--~~~~~~~v~~ 282 (301)
+++..++.... ..++++.+.+
T Consensus 229 ~~~~~L~~~~~~~~~G~~i~vdg 251 (256)
T PRK08643 229 NCVSFLAGPDSDYITGQTIIVDG 251 (256)
T ss_pred HHHHHHhCccccCccCcEEEeCC
Confidence 99865554321 3455554443
No 157
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.4e-22 Score=175.85 Aligned_cols=205 Identities=16% Similarity=0.161 Sum_probs=140.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHh-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAI----- 132 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~----- 132 (301)
++++|+++||||+|+||++++++|+++|++|++++|+++++++.... ...++.++.+|++| .+++.+.+
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~ 83 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEA 83 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999988765543211 12467889999999 66665543
Q ss_pred --cCCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcch
Q 022216 133 --GDDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAY 198 (301)
Q Consensus 133 --~~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~ 198 (301)
+. +|+||||||.... ++|...+++|+.+.+.+++++ ++.+.++||++||...+... +
T Consensus 84 ~~g~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~----- 154 (265)
T PRK07062 84 RFGG-VDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE---P----- 154 (265)
T ss_pred hcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC---C-----
Confidence 44 9999999996431 245667889999988887776 33445799999998643211 1
Q ss_pred hhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee--------c--------cccccccCCC
Q 022216 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--------E--------TEDTLYEGTI 255 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~--------~--------~~~~~~~~~v 255 (301)
....|..+|.+.+.+.+ +.|++++.|+||++.+++....+.. . ........+.
T Consensus 155 ----~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 230 (265)
T PRK07062 155 ----HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLG 230 (265)
T ss_pred ----CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCC
Confidence 13456677776654432 4689999999999998864322110 0 0001112356
Q ss_pred CHHHHHHHHHHHhcCCC---CCCcEEEeec
Q 022216 256 SRDQVAEVAVEALLHPE---SSYKVVEIIS 282 (301)
Q Consensus 256 ~~~Dva~~~~~~l~~~~---~~~~~~~v~~ 282 (301)
.++|+|++++.++ ++. ..++++.+.+
T Consensus 231 ~p~~va~~~~~L~-s~~~~~~tG~~i~vdg 259 (265)
T PRK07062 231 RPDEAARALFFLA-SPLSSYTTGSHIDVSG 259 (265)
T ss_pred CHHHHHHHHHHHh-CchhcccccceEEEcC
Confidence 8999999996654 443 2344444433
No 158
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.7e-22 Score=172.25 Aligned_cols=207 Identities=18% Similarity=0.151 Sum_probs=148.8
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|+++||||+|+||+++++.|+++|++|++++|++++..+... ....++.++.+|++| .+++.+.+..
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999998775544322 123578999999999 7776665531
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||+|.... ++++..+++|+.++.++++++.+ .+.++||++||...+... .
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~ 151 (250)
T PRK12939 84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA------------P 151 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC------------C
Confidence 39999999997432 13445678999999999988743 334699999997643221 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-----eccccccccCCCCHHHHHHHHHHHhcC
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-----~~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
....|+.+|.+.+.+.+ ..+++++.|+||.+.++....... ..........+++++|+|++++.++..
T Consensus 152 ~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (250)
T PRK12939 152 KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSD 231 (250)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 23568889998887654 368999999999998886432110 000111223468999999999887765
Q ss_pred CC--CCCcEEEeecC
Q 022216 271 PE--SSYKVVEIISR 283 (301)
Q Consensus 271 ~~--~~~~~~~v~~~ 283 (301)
+. ..++.+.+.++
T Consensus 232 ~~~~~~G~~i~~~gg 246 (250)
T PRK12939 232 AARFVTGQLLPVNGG 246 (250)
T ss_pred cccCccCcEEEECCC
Confidence 32 35666766653
No 159
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.89 E-value=1.7e-22 Score=175.33 Aligned_cols=201 Identities=18% Similarity=0.194 Sum_probs=139.8
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+++++|++|||||+|+||+++++.|+++|++|++++|+..... ..++.++.+|++| .+++.+.+.. +
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSS-AEEVNHTVAEIIEKFGR 77 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------cCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 3567899999999999999999999999999999998876532 2468889999999 6666655432 3
Q ss_pred CCEEEEccCCCCC-----------------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCC
Q 022216 136 SEAVVCATGFQPG-----------------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQIL 194 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~-----------------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~ 194 (301)
+|+||||||.... ++|+.++++|+.+++++++++.+ .+.++||++||...+...
T Consensus 78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 152 (266)
T PRK06171 78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS----- 152 (266)
T ss_pred CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----
Confidence 9999999996321 13345789999999999998853 344689999998644221
Q ss_pred CcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCccc-CCCCCCce----e-----------eccc---c
Q 022216 195 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLR-NEPPTGNI----I-----------METE---D 248 (301)
Q Consensus 195 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~-~~~~~~~~----~-----------~~~~---~ 248 (301)
.....|..+|.+.+.+.+ ..|++++.|+||.+. +++..... . .... .
T Consensus 153 -------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (266)
T PRK06171 153 -------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTST 225 (266)
T ss_pred -------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccc
Confidence 123578889988886653 368999999999986 43321100 0 0000 1
Q ss_pred ccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeec
Q 022216 249 TLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS 282 (301)
Q Consensus 249 ~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~ 282 (301)
.....+..++|+|+++. +|.++.+.+.+..+..
T Consensus 226 ~p~~r~~~~~eva~~~~-fl~s~~~~~itG~~i~ 258 (266)
T PRK06171 226 IPLGRSGKLSEVADLVC-YLLSDRASYITGVTTN 258 (266)
T ss_pred ccCCCCCCHHHhhhhee-eeeccccccceeeEEE
Confidence 11234568999999995 4555544444433333
No 160
>PRK09242 tropinone reductase; Provisional
Probab=99.89 E-value=2.3e-22 Score=173.71 Aligned_cols=207 Identities=15% Similarity=0.130 Sum_probs=146.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHH-----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEA----- 131 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~----- 131 (301)
+.+++|++|||||+|+||+++++.|+++|++|++++|+.+..++...+ ...++.++.+|++| .+++.+.
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~ 83 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVE 83 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHH
Confidence 456789999999999999999999999999999999987665543321 13568889999999 6555443
Q ss_pred --hcCCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcc
Q 022216 132 --IGDDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 132 --~~~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++. +|+||||||.... ++++..+++|+.++.++++++. +.+.++||++||...+...
T Consensus 84 ~~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-------- 154 (257)
T PRK09242 84 DHWDG-LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-------- 154 (257)
T ss_pred HHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC--------
Confidence 344 9999999996321 3456678999999999988874 3455799999998654322
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc------ccccccCCCCHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~------~~~~~~~~v~~~Dva~~~ 264 (301)
.....|+.+|.+.+.+++ ..|++++.|+||++.+++......... .......+..++|+++++
T Consensus 155 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 230 (257)
T PRK09242 155 ----RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAV 230 (257)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 123567888888876554 358999999999999987543211100 011112345889999999
Q ss_pred HHHhcCCC--CCCcEEEeec
Q 022216 265 VEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 265 ~~~l~~~~--~~~~~~~v~~ 282 (301)
..++..+. ..++.+.+.+
T Consensus 231 ~~l~~~~~~~~~g~~i~~~g 250 (257)
T PRK09242 231 AFLCMPAASYITGQCIAVDG 250 (257)
T ss_pred HHHhCcccccccCCEEEECC
Confidence 76664322 2355555543
No 161
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.89 E-value=3.4e-22 Score=170.94 Aligned_cols=187 Identities=18% Similarity=0.191 Sum_probs=141.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC---CCCEEEEc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCA 142 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~Vi~~ 142 (301)
+++++||||+|+||++++++|+++|++|++++|+++..+++.. ...++.++.+|++| .+++.+++.+ .+|.+|||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT-QSANIFTLAFDVTD-HPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-hcCCCeEEEeeCCC-HHHHHHHHHhcccCCCEEEEc
Confidence 3689999999999999999999999999999998776655443 23568899999999 8888887765 37899999
Q ss_pred cCCCCC--------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHH
Q 022216 143 TGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKL 212 (301)
Q Consensus 143 Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~ 212 (301)
||.... +++..++++|+.++.++++++... +.+++|++||....- + ......|+.+|.
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~---~---------~~~~~~Y~asK~ 146 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL---A---------LPRAEAYGASKA 146 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc---C---------CCCCchhhHHHH
Confidence 985321 124457899999999999998753 236899999975221 1 112356889999
Q ss_pred HHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 213 QAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 213 ~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
+.+.+.+ .+|+++++++||++.|++...... .....++++|+|+.++..+.++.
T Consensus 147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~------~~~~~~~~~~~a~~i~~~i~~~~ 207 (240)
T PRK06101 147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF------AMPMIITVEQASQEIRAQLARGK 207 (240)
T ss_pred HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC------CCCcccCHHHHHHHHHHHHhcCC
Confidence 8887653 468999999999999986543210 11124789999999999998753
No 162
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.89 E-value=4e-22 Score=172.06 Aligned_cols=208 Identities=18% Similarity=0.162 Sum_probs=146.7
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
..+++|+++||||+|+||++++++|+++|++|++++|+++.+.+... ....++.++.+|++| .+++.+++.+
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAE 85 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHh
Confidence 45679999999999999999999999999999999998766544322 134568899999999 6666655532
Q ss_pred --CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... ++++..+++|+.++.++++++. +.+.++||++||...+...
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------- 154 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR----------- 154 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----------
Confidence 48999999996432 2345568899999999997774 3566899999998643211
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
.....|..+|.+.+.+.+ ..+++++.|+||.+.++......... ........+++++|++++++.+
T Consensus 155 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l 233 (256)
T PRK06124 155 -AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFL 233 (256)
T ss_pred -CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 113567788888776543 35899999999999998633221100 0011123478999999999776
Q ss_pred hcCCC--CCCcEEEeec
Q 022216 268 LLHPE--SSYKVVEIIS 282 (301)
Q Consensus 268 l~~~~--~~~~~~~v~~ 282 (301)
+..+. ..|+.+.+.+
T Consensus 234 ~~~~~~~~~G~~i~~dg 250 (256)
T PRK06124 234 ASPAASYVNGHVLAVDG 250 (256)
T ss_pred cCcccCCcCCCEEEECC
Confidence 65442 2355554443
No 163
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=1.4e-22 Score=176.63 Aligned_cols=174 Identities=20% Similarity=0.273 Sum_probs=133.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchh------hhccc-------cCCCCeEEEEccCCCC-----hHh
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKA------KTTLS-------KDNPSLQIVKADVTEG-----SAK 127 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~------~~~~~-------~~~~~~~~~~~Dl~~~-----~~~ 127 (301)
++||+||||||+|.+++.+|+.+- .+|+|+.|..+.. .+... ....+++++.+|+..+ ...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999874 5999999987632 22111 2457999999999863 366
Q ss_pred HHHHhcCCCCEEEEccCCCC-CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcch--------
Q 022216 128 LSEAIGDDSEAVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAY-------- 198 (301)
Q Consensus 128 ~~~~~~~~~d~Vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~-------- 198 (301)
+.+.-.. +|.|||||+... -....+....|+.||..+++.|...+.|.++|+||++++......-.....
T Consensus 81 ~~~La~~-vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 81 WQELAEN-VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHhhh-cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccc
Confidence 6666677 999999998543 344556678999999999999998888889999999986544322111111
Q ss_pred hhcchhhHHHHHHHHHHHHHHH---cCCcEEEEecCcccCCCCCCc
Q 022216 199 IFLNVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGN 241 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~~---~~i~~~~irpg~v~~~~~~~~ 241 (301)
......+.|++||+.+|.++++ .|++++++|||++.++...+.
T Consensus 160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~ 205 (382)
T COG3320 160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGA 205 (382)
T ss_pred ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCc
Confidence 1233457899999999998864 689999999999999876554
No 164
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.2e-22 Score=172.79 Aligned_cols=192 Identities=17% Similarity=0.146 Sum_probs=137.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHH-------hcCCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-------IGDDS 136 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~~~ 136 (301)
+++|+++||||+|+||++++++|+++|++|++++|+.+..++...+...++.++++|++| .+++.+. +++ +
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~-i 81 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGR-L 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCC-C
Confidence 457899999999999999999999999999999998766554433334578889999999 5544433 344 9
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEeccccc-ccccCCCCCCcchhhcchhh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILV-NGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~-~~~~~~~~~~~~~~~~~~~~ 205 (301)
|+||||||.... ++++.++++|+.++.++++++.+. ..+++|++||... |+. ....
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-------------~~~~ 148 (249)
T PRK06500 82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-------------PNSS 148 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-------------CCcc
Confidence 999999986432 234567899999999999999642 2357888888542 221 1236
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCce----eec------cccccccCCCCHHHHHHHHHHHh
Q 022216 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----IME------TEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~----~~~------~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
.|+.+|.+.|.+.+ ..|+++++|+||.+.+++..... ... ........+.+++|+|++++.++
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 228 (249)
T PRK06500 149 VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLA 228 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 78899999987663 25899999999999998532110 000 00011123568999999997766
Q ss_pred cC
Q 022216 269 LH 270 (301)
Q Consensus 269 ~~ 270 (301)
..
T Consensus 229 ~~ 230 (249)
T PRK06500 229 SD 230 (249)
T ss_pred Cc
Confidence 43
No 165
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.7e-22 Score=172.79 Aligned_cols=207 Identities=14% Similarity=0.103 Sum_probs=146.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
.+++|+++||||+|+||++++++|+++|++|++++|+.++.++.. .....++.++.+|++| .+++.+.+..
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999999876654332 1234578899999999 6666555432
Q ss_pred -CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... ++++.++++|+.+..++++++ ++.+.+++|++||...+...
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~----------- 151 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA----------- 151 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----------
Confidence 38999999996421 235567889999998887765 34455799999998755422
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc-------ccccccCCCCHHHHHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~-------~~~~~~~~v~~~Dva~~~~~ 266 (301)
..+..|..+|.+.+.+.+ ..|++++.|+||.+.+++......... .......+.+++|+++.++.
T Consensus 152 -~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~ 230 (253)
T PRK06172 152 -PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLY 230 (253)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHH
Confidence 124678899998886653 258999999999999886433211000 00111235689999999976
Q ss_pred HhcCC--CCCCcEEEeec
Q 022216 267 ALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 267 ~l~~~--~~~~~~~~v~~ 282 (301)
++... ...|+++.+.+
T Consensus 231 l~~~~~~~~~G~~i~~dg 248 (253)
T PRK06172 231 LCSDGASFTTGHALMVDG 248 (253)
T ss_pred HhCccccCcCCcEEEECC
Confidence 66533 23455665555
No 166
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.89 E-value=3.2e-22 Score=173.59 Aligned_cols=208 Identities=16% Similarity=0.096 Sum_probs=148.3
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++++|+++||||+|+||++++++|+++|++|+++.|+.++.++... ....++.++++|++| .+++.+++..
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 84 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKE 84 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999988776554322 123468899999999 7666665532
Q ss_pred --CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... +++...+++|+.++..+++++. +.+.++||++||..... +
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---~--------- 152 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL---G--------- 152 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC---C---------
Confidence 39999999997432 2455677899999998888874 34567999999975211 1
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee--eccc----------cccccCCCCHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--METE----------DTLYEGTISRDQVA 261 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~--~~~~----------~~~~~~~v~~~Dva 261 (301)
...+..|+.+|.+.+.+.+ ..|++++.|+||.+.++....... .... ......+..++|+|
T Consensus 153 ~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 232 (265)
T PRK07097 153 RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLA 232 (265)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHH
Confidence 1124668889998876654 358999999999999986432211 0000 11122467899999
Q ss_pred HHHHHHhcCC--CCCCcEEEeec
Q 022216 262 EVAVEALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 262 ~~~~~~l~~~--~~~~~~~~v~~ 282 (301)
+.++.++..+ ...++++.+.+
T Consensus 233 ~~~~~l~~~~~~~~~g~~~~~~g 255 (265)
T PRK07097 233 GPAVFLASDASNFVNGHILYVDG 255 (265)
T ss_pred HHHHHHhCcccCCCCCCEEEECC
Confidence 9998877653 23555555554
No 167
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=2.2e-22 Score=174.00 Aligned_cols=194 Identities=15% Similarity=0.154 Sum_probs=135.4
Q ss_pred hcccCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEeCCchh---hhccccCCCCeEEEEccCCCChHhHHHHhcC--
Q 022216 62 VSVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKA---KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGat--G~iG~~~~~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-- 134 (301)
.++++|++|||||+ ++||++++++|+++|++|++.+|+.... +++.. ......++.+|++| .+++.+.+..
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~-~~~v~~~~~~~~ 83 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAE-ELDAPIFLPLDVRE-PGQLEAVFARIA 83 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHH-hhccceEEecCcCC-HHHHHHHHHHHH
Confidence 45679999999998 5999999999999999999988875432 22221 11235688999999 6655544322
Q ss_pred ----CCCEEEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCc
Q 022216 135 ----DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNP 196 (301)
Q Consensus 135 ----~~d~Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~ 196 (301)
++|++|||||.... ++|+..+++|+.+.+++++++... ..++||++||.... ..
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~---~~----- 155 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE---KV----- 155 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc---cC-----
Confidence 39999999996431 245678899999999999987432 22689999997521 11
Q ss_pred chhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHH
Q 022216 197 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEV 263 (301)
Q Consensus 197 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~ 263 (301)
...+..|+.+|.+.+.+.+ .+|++++.|.||.+.+++........ ........+..++|+|++
T Consensus 156 ----~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~ 231 (258)
T PRK07533 156 ----VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAV 231 (258)
T ss_pred ----CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHH
Confidence 1224678899998876553 36899999999999998643210000 001112246789999999
Q ss_pred HHHHhc
Q 022216 264 AVEALL 269 (301)
Q Consensus 264 ~~~~l~ 269 (301)
++.++.
T Consensus 232 ~~~L~s 237 (258)
T PRK07533 232 AAFLAS 237 (258)
T ss_pred HHHHhC
Confidence 966654
No 168
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.89 E-value=4.3e-22 Score=170.34 Aligned_cols=207 Identities=19% Similarity=0.146 Sum_probs=147.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+.+|+||||||+|+||+++++.|+++|++|+++.|++.+...... ....++.++.+|++| .+++.+.+.+
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 457899999999999999999999999999999998776443221 134578899999999 6666555542
Q ss_pred CCCEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+|||+||..... ++...++.|+.+..++++++. +.+.++||++||...... ..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~------------~~ 149 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG------------NP 149 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC------------CC
Confidence 379999999864321 234567899999999988884 456689999999753211 12
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee----ccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~----~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
++..|..+|.+.+.+.+ ..++++++||||.+.++........ .........+++++|+++++..++...
T Consensus 150 ~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~ 229 (246)
T PRK05653 150 GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDA 229 (246)
T ss_pred CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 24567788887765442 3589999999999999865421100 000111234678899999998877542
Q ss_pred --CCCCcEEEeecC
Q 022216 272 --ESSYKVVEIISR 283 (301)
Q Consensus 272 --~~~~~~~~v~~~ 283 (301)
...++++++.++
T Consensus 230 ~~~~~g~~~~~~gg 243 (246)
T PRK05653 230 ASYITGQVIPVNGG 243 (246)
T ss_pred hcCccCCEEEeCCC
Confidence 235778888774
No 169
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.89 E-value=5.4e-22 Score=176.27 Aligned_cols=209 Identities=18% Similarity=0.171 Sum_probs=143.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
++++|+++||||++|||.+++++|+++|++|++++|+.++.++...+ ...++.++.+|++| .+++.+.+..
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~ 89 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRA 89 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999987765543221 23468899999999 7666655432
Q ss_pred ---CCCEEEEccCCCCC-------CCCCCceeeehHHHHHHHHHHHH---cCCCEEEEecccccccccC-CCCCCcchhh
Q 022216 135 ---DSEAVVCATGFQPG-------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAM-GQILNPAYIF 200 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~-------~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~-~~~~~~~~~~ 200 (301)
++|+||||||.... ++++.++++|+.|.+.+++.+.. .+.++||++||...+.... ...... ...
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~-~~~ 168 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNW-ERS 168 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccc-ccc
Confidence 49999999996431 34566789999999988888742 2346999999986543211 111111 112
Q ss_pred cchhhHHHHHHHHHHHHHH---------HcCCcEEEEecCcccCCCCCCceeeccc-c----cc---c--cC--CCCHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGNIIMETE-D----TL---Y--EG--TISRDQ 259 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~---------~~~i~~~~irpg~v~~~~~~~~~~~~~~-~----~~---~--~~--~v~~~D 259 (301)
..++..|+.+|++.+.+.+ ..|++++.+.||.+.+++.......... . .. . .+ ..++++
T Consensus 169 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
T PRK05854 169 YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVES 248 (313)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHH
Confidence 3456789999999876543 1379999999999998864321110000 0 00 0 01 246778
Q ss_pred HHHHHHHHhcCCCC
Q 022216 260 VAEVAVEALLHPES 273 (301)
Q Consensus 260 va~~~~~~l~~~~~ 273 (301)
-|...+.+..++..
T Consensus 249 ga~~~l~~a~~~~~ 262 (313)
T PRK05854 249 AILPALYAATSPDA 262 (313)
T ss_pred HHHHhhheeeCCCC
Confidence 88877777766653
No 170
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.2e-21 Score=169.68 Aligned_cols=193 Identities=15% Similarity=0.190 Sum_probs=140.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
+++||||||+|+||+++++.|++.|++|++++|++.+.++.. .....++.++.+|++| .+++.+++.. ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999876544322 1134578899999999 7766665542 39
Q ss_pred CEEEEccCCCCCCC---------CCCceeeehHHHHHHHHHHHH---cCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPGWD---------LFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~~~---------~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|+||||||...... +...+++|+.++.++++++.+ .+.+++|++||...+... .+.
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~ 147 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV------------PTR 147 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC------------CCc
Confidence 99999998654321 234478999999999999843 234799999998765321 124
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-----eccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-----~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
..|+.+|...+.+.+ ..++++++|+||.+.+++...... ..........+++++|+|++++.++...
T Consensus 148 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 148 SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCC
Confidence 678899998887653 358999999999999876432211 0001111125799999999998888753
No 171
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.89 E-value=3.9e-22 Score=172.91 Aligned_cols=207 Identities=19% Similarity=0.136 Sum_probs=146.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
+++++++|||||+|+||+++++.|+++|++|++++|+.++.+++... ...++.++.+|++| .+++.+++..
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAF 85 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 45689999999999999999999999999999999987665543221 23568899999999 7766655431
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH-----cCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK-----RGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~-----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... +++..++++|+.++.++++++.+ .+.++||++||...+..
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------ 153 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA------------ 153 (263)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC------------
Confidence 39999999986332 23456789999999999999853 34579999999753211
Q ss_pred cchhhHHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCc-----eeecc-ccccccCCCCHHHHHHHHHHHh
Q 022216 201 LNVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGN-----IIMET-EDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~-----~~~~~-~~~~~~~~v~~~Dva~~~~~~l 268 (301)
......|+.+|.+++.+.+. .+++++.|+||.+.+++.... +.... .........+++|+|++++.++
T Consensus 154 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 233 (263)
T PRK07814 154 GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLA 233 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 12346789999998876642 368999999999988753211 00000 0111123468999999997766
Q ss_pred cCC--CCCCcEEEeec
Q 022216 269 LHP--ESSYKVVEIIS 282 (301)
Q Consensus 269 ~~~--~~~~~~~~v~~ 282 (301)
... ...++.+.+.+
T Consensus 234 ~~~~~~~~g~~~~~~~ 249 (263)
T PRK07814 234 SPAGSYLTGKTLEVDG 249 (263)
T ss_pred CccccCcCCCEEEECC
Confidence 432 23455666654
No 172
>PRK06484 short chain dehydrogenase; Validated
Probab=99.89 E-value=2.5e-22 Score=190.52 Aligned_cols=207 Identities=15% Similarity=0.113 Sum_probs=149.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
...+|++|||||+|+||++++++|+++|++|++++|+.++++++.......+..+.+|++| .+++.+.+.. ++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 3468999999999999999999999999999999998877665544334567789999999 6666555432 49
Q ss_pred CEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhh
Q 022216 137 EAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 137 d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
|+||||||.... ++|+.++++|+.+++++++++... +.++||++||.+.+... ....
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~ 412 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL------------PPRN 412 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC------------CCCc
Confidence 999999996421 245677899999999999998653 34699999998643211 2246
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc-------ccccccCCCCHHHHHHHHHHHhcCC
Q 022216 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~-------~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.|+.+|...+.+.+ .+||+++.|+||.+.+++......... .......+.+++|+|++++.++...
T Consensus 413 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~ 492 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPA 492 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 78899999886654 358999999999999986432110000 0111223568999999997666432
Q ss_pred C--CCCcEEEeec
Q 022216 272 E--SSYKVVEIIS 282 (301)
Q Consensus 272 ~--~~~~~~~v~~ 282 (301)
. ..++++.+.+
T Consensus 493 ~~~~~G~~i~vdg 505 (520)
T PRK06484 493 ASYVNGATLTVDG 505 (520)
T ss_pred ccCccCcEEEECC
Confidence 2 3455666554
No 173
>PRK06194 hypothetical protein; Provisional
Probab=99.89 E-value=4.2e-22 Score=174.81 Aligned_cols=195 Identities=14% Similarity=0.136 Sum_probs=139.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|++|||||+||||++++++|+++|++|++++|+.+.+++.... ...++.++.+|++| .+++.+++.+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999987655443221 23468889999999 7777666542
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCC------CEEEEecccccccccCCCCCCc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGV------NRFILISSILVNGAAMGQILNP 196 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~------~~iV~~SS~~~~~~~~~~~~~~ 196 (301)
++|+||||||.... +++...+++|+.|+.++++++ .+.+. ++||++||.+.+...
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------- 155 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP------- 155 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------
Confidence 38999999997542 234556889999999988885 44433 589999998765322
Q ss_pred chhhcchhhHHHHHHHHHHHHHHH---------cCCcEEEEecCcccCCCCCCce----eeccc-ccc------------
Q 022216 197 AYIFLNVFGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNI----IMETE-DTL------------ 250 (301)
Q Consensus 197 ~~~~~~~~~~y~~sK~~~e~~~~~---------~~i~~~~irpg~v~~~~~~~~~----~~~~~-~~~------------ 250 (301)
...+.|+.+|.+.+.+.+. .+++++.+.||.+.++...... ..... .+.
T Consensus 156 -----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T PRK06194 156 -----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQK 230 (287)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHh
Confidence 1235788999998876531 3588999999999887543210 11010 000
Q ss_pred --ccCCCCHHHHHHHHHHHhcCC
Q 022216 251 --YEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 251 --~~~~v~~~Dva~~~~~~l~~~ 271 (301)
....++++|+|+.++..+..+
T Consensus 231 ~~~~~~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 231 AVGSGKVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred hhhccCCCHHHHHHHHHHHHHcC
Confidence 012478999999998877543
No 174
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.89 E-value=2.4e-22 Score=173.79 Aligned_cols=207 Identities=18% Similarity=0.206 Sum_probs=138.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
|++|||||+|+||++++++|+++|++|++++|+++..++...+ ...++.++.+|++| .+++.+.+.. ++|+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 5899999999999999999999999999999987665443221 12367889999999 7666655531 4999
Q ss_pred EEEccCCCCC----------CCCCCceeeehHHHHHHHHHH----H-HcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 139 VVCATGFQPG----------WDLFAPWKVDNFGTVNLVEAC----R-KRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 139 Vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~----~-~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
||||||.... ++|...+++|+.+...+.+++ . +.+.++||++||...+.. ...
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~------------~~~ 147 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP------------MPP 147 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC------------CCC
Confidence 9999996321 123345678888877665554 2 234579999999864321 112
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-------ec---------cccccccCCCCHHHH
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------ME---------TEDTLYEGTISRDQV 260 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-------~~---------~~~~~~~~~v~~~Dv 260 (301)
...|..+|.+.+.+.+ ..|++++.|.||++.+++...... .. ........+..++|+
T Consensus 148 ~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv 227 (259)
T PRK08340 148 LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEEL 227 (259)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHH
Confidence 3567788888876553 368999999999999986432100 00 001112235689999
Q ss_pred HHHHHHHhcCCCCCCcEEEeecCCCCC
Q 022216 261 AEVAVEALLHPESSYKVVEIISRVDAP 287 (301)
Q Consensus 261 a~~~~~~l~~~~~~~~~~~v~~~~~~~ 287 (301)
|++++ +|.++...+.+..+...|++.
T Consensus 228 a~~~~-fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 228 GSLIA-FLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred HHHHH-HHcCcccccccCceEeecCCc
Confidence 99995 455554444444433333333
No 175
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.89 E-value=1.1e-21 Score=168.07 Aligned_cols=207 Identities=17% Similarity=0.160 Sum_probs=143.3
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhc---cccCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
.+++|++|||||+|+||+++++.|+++|++|+++.|+..+ .... ......++.++.+|++| .+++.+++..
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 80 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAE 80 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999888887653 2211 11134578899999999 7766665542
Q ss_pred --CCCEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 --DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||..... ++...+++|+.++.++++++.+ .+.++||++||...+...
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~----------- 149 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN----------- 149 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC-----------
Confidence 389999999864321 2344577999999999988854 345789999997432111
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee----ccccccccCCCCHHHHHHHHHHHhc
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ETEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~----~~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
.....|..+|.+.+.+++ ..++++++++||.+.++........ .........+.+++|+|+++..++.
T Consensus 150 -~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 228 (248)
T PRK05557 150 -PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLAS 228 (248)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 113557788887775543 3589999999999987653321100 0001112346799999999976665
Q ss_pred C--CCCCCcEEEeec
Q 022216 270 H--PESSYKVVEIIS 282 (301)
Q Consensus 270 ~--~~~~~~~~~v~~ 282 (301)
. ....++.+++.+
T Consensus 229 ~~~~~~~g~~~~i~~ 243 (248)
T PRK05557 229 DEAAYITGQTLHVNG 243 (248)
T ss_pred cccCCccccEEEecC
Confidence 4 234567788765
No 176
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.1e-22 Score=176.66 Aligned_cols=205 Identities=15% Similarity=0.091 Sum_probs=138.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCC---------chhhhccc---cCCCCeEEEEccCCCChHhHHHH
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL---------DKAKTTLS---KDNPSLQIVKADVTEGSAKLSEA 131 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~---------~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~ 131 (301)
+++|++|||||+++||++++++|+++|++|++++|+. +..++... ....++.++.+|++| .+++.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHHH
Confidence 4689999999999999999999999999999988765 33332221 124567889999999 6665554
Q ss_pred hcC------CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC------CCEEEEeccccccc
Q 022216 132 IGD------DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG------VNRFILISSILVNG 187 (301)
Q Consensus 132 ~~~------~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~------~~~iV~~SS~~~~~ 187 (301)
+.. ++|++|||||+... ++|+.++++|+.+++++++++.. .. .++||++||.+.+.
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 421 49999999997432 34667789999999999888742 11 25899999986432
Q ss_pred ccCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee--ccccccccCCCCHH
Q 022216 188 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--ETEDTLYEGTISRD 258 (301)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~--~~~~~~~~~~v~~~ 258 (301)
.. ..+..|+.+|.+.+.+.+ ..||+++.|.|| +.+++....... ............++
T Consensus 163 ~~------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~pe 229 (286)
T PRK07791 163 GS------------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAPE 229 (286)
T ss_pred CC------------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCCHH
Confidence 11 124568888888876543 368999999999 666653221100 00000001256899
Q ss_pred HHHHHHHHHhcCC--CCCCcEEEeec
Q 022216 259 QVAEVAVEALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 259 Dva~~~~~~l~~~--~~~~~~~~v~~ 282 (301)
|+|++++.++... ...++.+.+.+
T Consensus 230 dva~~~~~L~s~~~~~itG~~i~vdg 255 (286)
T PRK07791 230 NVSPLVVWLGSAESRDVTGKVFEVEG 255 (286)
T ss_pred HHHHHHHHHhCchhcCCCCcEEEEcC
Confidence 9999997665432 23455555443
No 177
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.89 E-value=5.8e-22 Score=171.29 Aligned_cols=204 Identities=15% Similarity=0.130 Sum_probs=141.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc----C-CCCeEEEEccCCCChHhHHHHhcC------
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----D-NPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+|+||||||+|+||++++++|+++|++|++++|+....++.... . ..++.++.+|++| .+++..++.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999987655443211 1 2468899999999 6665554432
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEeccccc-ccccCCCCCCcchhh
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILV-NGAAMGQILNPAYIF 200 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~-~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... +++...+++|+.+++++++++.+ .+ .++||++||... ++.
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------ 148 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------ 148 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------
Confidence 39999999986432 23456679999999988888743 34 369999999652 211
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee--------ec--------cccccccCCCCH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--------ME--------TEDTLYEGTISR 257 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~--------~~--------~~~~~~~~~v~~ 257 (301)
.....|+.+|.+.+.+.+ ..|++++.|+||.++++....... .. ........++++
T Consensus 149 -~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (259)
T PRK12384 149 -KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDY 227 (259)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCH
Confidence 113568889998765542 478999999999876543211110 00 001122357899
Q ss_pred HHHHHHHHHHhcCCC--CCCcEEEeecC
Q 022216 258 DQVAEVAVEALLHPE--SSYKVVEIISR 283 (301)
Q Consensus 258 ~Dva~~~~~~l~~~~--~~~~~~~v~~~ 283 (301)
+|++++++.++.... ..++++++.++
T Consensus 228 ~dv~~~~~~l~~~~~~~~~G~~~~v~~g 255 (259)
T PRK12384 228 QDVLNMLLFYASPKASYCTGQSINVTGG 255 (259)
T ss_pred HHHHHHHHHHcCcccccccCceEEEcCC
Confidence 999999976654332 34677888774
No 178
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.1e-21 Score=166.82 Aligned_cols=196 Identities=18% Similarity=0.162 Sum_probs=140.7
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-----CCCEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----DSEAV 139 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 139 (301)
.+|++|||||+|+||++++++|+++|++|+++.|+..+. ....++.+|++| .+++.+.+.. ++|+|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~v 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------FPGELFACDLAD-IEQTAATLAQINEIHPVDAI 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------cCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEE
Confidence 468999999999999999999999999999999986541 122578999999 7766665542 38999
Q ss_pred EEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhhHH
Q 022216 140 VCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (301)
Q Consensus 140 i~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y 207 (301)
|||||.... +++...+++|+.++.++.+++ ++.+.++||++||...|+.. ....|
T Consensus 73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------~~~~Y 139 (234)
T PRK07577 73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-------------DRTSY 139 (234)
T ss_pred EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-------------CchHH
Confidence 999997432 234456789999988887776 44566899999998755321 13568
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccc-------cccccCCCCHHHHHHHHHHHhcCCC-
Q 022216 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE-------DTLYEGTISRDQVAEVAVEALLHPE- 272 (301)
Q Consensus 208 ~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~-------~~~~~~~v~~~Dva~~~~~~l~~~~- 272 (301)
..+|.+.+.+.+ +.|+++++|+||.+.++........... .........++|+|++++.++..+.
T Consensus 140 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~ 219 (234)
T PRK07577 140 SAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAG 219 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccC
Confidence 899988876553 3599999999999998864321110000 0111123579999999988876543
Q ss_pred -CCCcEEEeec
Q 022216 273 -SSYKVVEIIS 282 (301)
Q Consensus 273 -~~~~~~~v~~ 282 (301)
..++.+.+.+
T Consensus 220 ~~~g~~~~~~g 230 (234)
T PRK07577 220 FITGQVLGVDG 230 (234)
T ss_pred CccceEEEecC
Confidence 3456666654
No 179
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=4e-22 Score=172.27 Aligned_cols=194 Identities=14% Similarity=0.164 Sum_probs=134.2
Q ss_pred cccCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEeCC---chhhhccccC-CCCeEEEEccCCCChHhHHHHhcC--
Q 022216 63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL---DKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIGD-- 134 (301)
Q Consensus 63 ~~~~~~vlVtGat--G~iG~~~~~~l~~~G~~V~~~~r~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-- 134 (301)
++++|+++||||+ ++||++++++|+++|++|++..|+. +.++++..+. ..++.++++|++| .+++.+.+..
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~ 82 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIK 82 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHH
Confidence 4578999999997 8999999999999999999887653 2333332222 3568889999999 6665554431
Q ss_pred ----CCCEEEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCc
Q 022216 135 ----DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNP 196 (301)
Q Consensus 135 ----~~d~Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~ 196 (301)
++|++|||||+... ++|...+++|+.+.+.+++++.+. ..++||++||.... .+
T Consensus 83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~---~~----- 154 (257)
T PRK08594 83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE---RV----- 154 (257)
T ss_pred HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc---cC-----
Confidence 49999999996421 123456789999999888887542 23699999998532 11
Q ss_pred chhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee----c--cccccccCCCCHHHHHHH
Q 022216 197 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----E--TEDTLYEGTISRDQVAEV 263 (301)
Q Consensus 197 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~----~--~~~~~~~~~v~~~Dva~~ 263 (301)
...+..|..+|.+.+.+.+ .+||+++.|.||.+.+++....... . ........+..++|+|++
T Consensus 155 ----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~ 230 (257)
T PRK08594 155 ----VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDT 230 (257)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHH
Confidence 1124568889998886553 3689999999999998753211000 0 001112235789999999
Q ss_pred HHHHhc
Q 022216 264 AVEALL 269 (301)
Q Consensus 264 ~~~~l~ 269 (301)
++.++.
T Consensus 231 ~~~l~s 236 (257)
T PRK08594 231 AAFLFS 236 (257)
T ss_pred HHHHcC
Confidence 966554
No 180
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.88 E-value=4.1e-22 Score=172.41 Aligned_cols=193 Identities=19% Similarity=0.133 Sum_probs=139.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccC-CCCeEEEEccCCCChHhHHHHhcC-------CCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIGD-------DSE 137 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-------~~d 137 (301)
+|++|||||+|+||++++++|+++|++|++++|+.+..+++.... ..++.++.+|++| .+++.+.+.+ ++|
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 378999999999999999999999999999999987766554321 3578999999999 6666655431 489
Q ss_pred EEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcchhh
Q 022216 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 138 ~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
+||||||.... ++++.++++|+.++.++++++. +.+.++||++||...+... ....
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~ 147 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ------------PGLA 147 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC------------CCch
Confidence 99999997542 2345678999999999988874 3445799999997532111 1135
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee--eccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--METEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~--~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.|+.+|...+.+.+ ..++++++|+||.+.+++...... ...........+.++|+|++++.++..+
T Consensus 148 ~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 148 VYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhCC
Confidence 67888888876553 358999999999998876443100 0000111123478899999999888654
No 181
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=6.3e-22 Score=171.46 Aligned_cols=205 Identities=18% Similarity=0.206 Sum_probs=135.9
Q ss_pred ccCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEeCCc---hhhhccccCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 64 ~~~~~vlVtGa--tG~iG~~~~~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++|++||||| +++||++++++|+++|++|++..|+.. ..+++.. .......+++|++| .+++.+.+..
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAA-ELDSELVFRCDVAS-DDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHh-ccCCceEEECCCCC-HHHHHHHHHHHHHH
Confidence 56899999997 679999999999999999998766532 2222222 11235678999999 6666555432
Q ss_pred --CCCEEEEccCCCCC-------------CCCCCceeeehHHHHHHHHHHHH---cCCCEEEEecccccccccCCCCCCc
Q 022216 135 --DSEAVVCATGFQPG-------------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNP 196 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~-------------~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~~ 196 (301)
++|++|||||+... ++|+..+++|+.+.+.+++++.. .+.++||++||...+. +.
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~---~~---- 154 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR---AI---- 154 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc---CC----
Confidence 49999999997532 12344578999999888887632 2236899999976321 11
Q ss_pred chhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee----e-c-cccccccCCCCHHHHHHH
Q 022216 197 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----M-E-TEDTLYEGTISRDQVAEV 263 (301)
Q Consensus 197 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~----~-~-~~~~~~~~~v~~~Dva~~ 263 (301)
..+..|..+|.+.+.+.+ .+||+++.|.||.+.+++...... . . ........+..++|+|++
T Consensus 155 -----~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~ 229 (261)
T PRK08690 155 -----PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNT 229 (261)
T ss_pred -----CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHH
Confidence 124568888988876543 468999999999999985322100 0 0 011122346789999999
Q ss_pred HHHHhcCCCCCCcEEEeecC
Q 022216 264 AVEALLHPESSYKVVEIISR 283 (301)
Q Consensus 264 ~~~~l~~~~~~~~~~~v~~~ 283 (301)
++.++. +...+.+..+...
T Consensus 230 v~~l~s-~~~~~~tG~~i~v 248 (261)
T PRK08690 230 AAFLLS-DLSSGITGEITYV 248 (261)
T ss_pred HHHHhC-cccCCcceeEEEE
Confidence 966654 3333333333333
No 182
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.88 E-value=4.3e-22 Score=171.80 Aligned_cols=194 Identities=18% Similarity=0.220 Sum_probs=139.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+|++|||||+|+||++++++|+++|++|+++.|++....++.. ....++.++.+|++| .+++.+++.+++|+||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-AIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-HHHHHHHhcCCCCEEEEC
Confidence 4789999999999999999999999999999998765443221 133468899999999 788888877349999999
Q ss_pred cCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHH
Q 022216 143 TGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA 210 (301)
Q Consensus 143 Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s 210 (301)
||.... ++++..+++|+.++.++.+++ ++.+.++||++||...+... .....|+.+
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~------------~~~~~Y~~s 148 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG------------PFTGAYCAS 148 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC------------CCcchhHHH
Confidence 996532 124456788999987776654 45566899999997533211 123568899
Q ss_pred HHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee----e--c-------cccccccCCCCHHHHHHHHHHHhcC
Q 022216 211 KLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----M--E-------TEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 211 K~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~----~--~-------~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
|.+.|.+.+ ..|+++++|+||++.++....... . . .......++++++|+++.++.++..
T Consensus 149 K~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (257)
T PRK09291 149 KHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPA 228 (257)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcC
Confidence 999886543 369999999999988764321100 0 0 0011123457899999999888876
Q ss_pred CC
Q 022216 271 PE 272 (301)
Q Consensus 271 ~~ 272 (301)
+.
T Consensus 229 ~~ 230 (257)
T PRK09291 229 DT 230 (257)
T ss_pred CC
Confidence 64
No 183
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=4.2e-22 Score=173.53 Aligned_cols=193 Identities=14% Similarity=0.148 Sum_probs=134.3
Q ss_pred cccCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEeCC---chhhhccccCCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL---DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGat--G~iG~~~~~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
.+++|++|||||+ ++||++++++|+++|++|++..|+. +..+++..+. .....+++|++| .+++.+.+..
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~-~~~~~~~~Dl~~-~~~v~~~~~~~~~ 84 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL-GAFVAGHCDVTD-EASIDAVFETLEK 84 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc-CCceEEecCCCC-HHHHHHHHHHHHH
Confidence 3468999999997 8999999999999999999887763 2222222211 235678999999 6666655432
Q ss_pred ---CCCEEEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcc
Q 022216 135 ---DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|++|||||+... ++|+..+++|+.+++.+++++.+. +.++||++||.+.. .+
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~---~~------ 155 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE---KV------ 155 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc---cC------
Confidence 49999999996421 246678899999999999988543 23699999987532 11
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee----ecc--ccccccCCCCHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----MET--EDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~----~~~--~~~~~~~~v~~~Dva~~~ 264 (301)
...+..|+.+|.+.+.+.+ ..||+++.|.||.+.+++...... ... .......+..++|+|+++
T Consensus 156 ---~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~ 232 (272)
T PRK08159 156 ---MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSA 232 (272)
T ss_pred ---CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHH
Confidence 1224668899998876553 368999999999999875321100 000 011122356899999999
Q ss_pred HHHhc
Q 022216 265 VEALL 269 (301)
Q Consensus 265 ~~~l~ 269 (301)
+.++.
T Consensus 233 ~~L~s 237 (272)
T PRK08159 233 LYLLS 237 (272)
T ss_pred HHHhC
Confidence 66664
No 184
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=7.6e-22 Score=168.07 Aligned_cols=199 Identities=16% Similarity=0.141 Sum_probs=140.4
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCCh-HhHHHHhcCCCCEEEEc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS-AKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~d~Vi~~ 142 (301)
+++|+++||||+|+||++++++|+++|++|++++|+.... ...++.++.+|+++ . +.+.+.++. +|+||||
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~-~~~~~~~~~~~-id~lv~~ 74 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLSD-DLEPLFDWVPS-VDILCNT 74 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChHH-HHHHHHHhhCC-CCEEEEC
Confidence 4689999999999999999999999999999999875432 12468899999998 5 555555666 9999999
Q ss_pred cCCCCC---------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhcchhhHHHH
Q 022216 143 TGFQPG---------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (301)
Q Consensus 143 Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~ 209 (301)
||.... ++++..+++|+.++.++++++.. .+.++||++||...+... .....|+.
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~ 142 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG------------GGGAAYTA 142 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------CCCcccHH
Confidence 995321 23456789999999999998843 345689999998644211 11345777
Q ss_pred HHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHHhcCCC--CC
Q 022216 210 AKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALLHPE--SS 274 (301)
Q Consensus 210 sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l~~~~--~~ 274 (301)
+|...+.+.+ ..|+++++|+||++.++......... ........+..++|+|++++.++..+. ..
T Consensus 143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~ 222 (235)
T PRK06550 143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQ 222 (235)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCC
Confidence 8887765543 35899999999999988643221100 001112336789999999976664322 24
Q ss_pred CcEEEeec
Q 022216 275 YKVVEIIS 282 (301)
Q Consensus 275 ~~~~~v~~ 282 (301)
++++.+.+
T Consensus 223 g~~~~~~g 230 (235)
T PRK06550 223 GTIVPIDG 230 (235)
T ss_pred CcEEEECC
Confidence 44555443
No 185
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.88 E-value=2.8e-22 Score=173.55 Aligned_cols=207 Identities=13% Similarity=0.081 Sum_probs=138.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCC-chhhhcc----ccCCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTL----SKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
++++|++|||||+++||++++++|+++|++|+++.|+. +..+... .....++.++.+|++| .+++.+.+..
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~ 83 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDE 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHH
Confidence 46789999999999999999999999999998876643 3332221 1123578899999999 6666555432
Q ss_pred ---CCCEEEEccCCCCC--------------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCC
Q 022216 135 ---DSEAVVCATGFQPG--------------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQI 193 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~--------------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~ 193 (301)
++|+||||||.... +++...+++|+.+.+.+.+.+. +.+.++||++||...+. .
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---~-- 158 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV---Y-- 158 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc---C--
Confidence 39999999985310 2344567889888877766653 33456999999975221 1
Q ss_pred CCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHH
Q 022216 194 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQV 260 (301)
Q Consensus 194 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dv 260 (301)
...+..|+.+|.+.+.+.+ ..|++++.|+||++.+++........ ........+.+++|+
T Consensus 159 -------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~v 231 (260)
T PRK08416 159 -------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDL 231 (260)
T ss_pred -------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHH
Confidence 1123568889998886653 35899999999999998633211000 000112236789999
Q ss_pred HHHHHHHhcCCC--CCCcEEEeec
Q 022216 261 AEVAVEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 261 a~~~~~~l~~~~--~~~~~~~v~~ 282 (301)
|++++.++..+. ..++++.+.+
T Consensus 232 a~~~~~l~~~~~~~~~G~~i~vdg 255 (260)
T PRK08416 232 AGACLFLCSEKASWLTGQTIVVDG 255 (260)
T ss_pred HHHHHHHcChhhhcccCcEEEEcC
Confidence 999976654322 3445555543
No 186
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.88 E-value=8.9e-22 Score=168.60 Aligned_cols=206 Identities=19% Similarity=0.203 Sum_probs=143.7
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhc---cccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
+++++++||||+|+||+++++.|+++|++|+++.|+... ..+. ......++.++.+|++| .+++.+.+..
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 457999999999999999999999999999887776432 1111 11134578899999999 7666666542
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
++|+||||||.... ++++.++++|+.++.++++++.+. ..++||++||...+.. ...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------~~~ 149 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP------------LPG 149 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC------------CCC
Confidence 39999999996432 234566789999999999988653 2368999999754321 122
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec-----cccccccCCCCHHHHHHHHHHHhcCC
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~-----~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
...|+.+|.+.+.+++ ..++++++|+||++.+++..+..... ........+.+++|+|++++.++..+
T Consensus 150 ~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 229 (245)
T PRK12937 150 YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPD 229 (245)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 4678899999887664 25899999999999988632211000 00111224568999999987776543
Q ss_pred C--CCCcEEEeec
Q 022216 272 E--SSYKVVEIIS 282 (301)
Q Consensus 272 ~--~~~~~~~v~~ 282 (301)
. ..++.+++.+
T Consensus 230 ~~~~~g~~~~~~~ 242 (245)
T PRK12937 230 GAWVNGQVLRVNG 242 (245)
T ss_pred ccCccccEEEeCC
Confidence 2 2356666654
No 187
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.3e-21 Score=169.02 Aligned_cols=207 Identities=19% Similarity=0.230 Sum_probs=144.8
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
..+++|+++||||+|+||+++++.|+++|++|+++.|+.++++++.. ....++.++.+|+++ .+++.+.+.+
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 83 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETE 83 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 34678999999999999999999999999999999998876554332 123568899999999 6666665542
Q ss_pred --CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC--------CCEEEEecccccccccCCC
Q 022216 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG--------VNRFILISSILVNGAAMGQ 192 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~--------~~~iV~~SS~~~~~~~~~~ 192 (301)
++|+||||||.... +++..++++|+.++.++++++.. .. .+++|++||...+..
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---- 159 (258)
T PRK06949 84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV---- 159 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC----
Confidence 39999999996432 23556789999999999988742 21 258999999864421
Q ss_pred CCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc----cc-ccccCCCCHHHH
Q 022216 193 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET----ED-TLYEGTISRDQV 260 (301)
Q Consensus 193 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~----~~-~~~~~~v~~~Dv 260 (301)
......|+.+|.+.+.+.+ .+++++++|+||++.+++......... .. .....+..++|+
T Consensus 160 --------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 231 (258)
T PRK06949 160 --------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDL 231 (258)
T ss_pred --------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHH
Confidence 1124568888888776553 258999999999999987543211100 00 011235678999
Q ss_pred HHHHHHHhcCCC--CCCcEEEee
Q 022216 261 AEVAVEALLHPE--SSYKVVEII 281 (301)
Q Consensus 261 a~~~~~~l~~~~--~~~~~~~v~ 281 (301)
+++++.++.... ..+....+.
T Consensus 232 ~~~~~~l~~~~~~~~~G~~i~~d 254 (258)
T PRK06949 232 DGLLLLLAADESQFINGAIISAD 254 (258)
T ss_pred HHHHHHHhChhhcCCCCcEEEeC
Confidence 999966654322 344444443
No 188
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.88 E-value=7.7e-22 Score=168.24 Aligned_cols=202 Identities=15% Similarity=0.105 Sum_probs=139.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCCEE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV 139 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~V 139 (301)
+|++|||||+|+||++++++|+++|++|++++|++++..+... ..++.++.+|++| .+++.+.+.. ++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR--QAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--HcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEE
Confidence 4799999999999999999999999999999998765433322 1347889999999 6555544422 39999
Q ss_pred EEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC--CCEEEEecccccccccCCCCCCcchhhcchhh
Q 022216 140 VCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG--VNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 140 i~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
|||||.... ++++..+++|+.+++.+++++.+ .+ .++||++||..... + ...+.
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~---~---------~~~~~ 146 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK---G---------SDKHI 146 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc---C---------CCCCc
Confidence 999996321 23556789999999988877743 23 46899999975321 1 11246
Q ss_pred HHHHHHHHHHHHHHH------cCCcEEEEecCcccCCCCCCc-ee-eccccccccCCCCHHHHHHHHHHHhcCCCCCCcE
Q 022216 206 LTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGN-II-METEDTLYEGTISRDQVAEVAVEALLHPESSYKV 277 (301)
Q Consensus 206 ~y~~sK~~~e~~~~~------~~i~~~~irpg~v~~~~~~~~-~~-~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~ 277 (301)
.|+.+|.+.+.+.+. .+++++.|+||++.++..... .. ..........+..++|+|+++..++......+++
T Consensus 147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~ 226 (236)
T PRK06483 147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLTSCYVTGRS 226 (236)
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHHhcCCCcCCcE
Confidence 789999999877642 369999999999876532111 10 0000111223467999999997777544455666
Q ss_pred EEeec
Q 022216 278 VEIIS 282 (301)
Q Consensus 278 ~~v~~ 282 (301)
+.+.+
T Consensus 227 i~vdg 231 (236)
T PRK06483 227 LPVDG 231 (236)
T ss_pred EEeCc
Confidence 66654
No 189
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.88 E-value=9.2e-22 Score=171.22 Aligned_cols=192 Identities=14% Similarity=0.167 Sum_probs=139.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
|+|+||||+|+||++++++|+++|++|++++|+.++.++... ....++.++.+|++| .+++.+.+.. ++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999999999998776554322 134578899999999 6666665531 399
Q ss_pred EEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchhh
Q 022216 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 138 ~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
+||||||.... ++++.++++|+.+..++.+++ ++.+.++||++||...+... ....
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~ 147 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG------------PAMS 147 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC------------CCch
Confidence 99999996542 234446789999988877775 55566899999998654321 1246
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccc------cccccCCCCHHHHHHHHHHHhcCC
Q 022216 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE------DTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~------~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.|..+|.+.+.+.+ ..|+++++|+||.+.++........... ......+++++|+|+.++.++..+
T Consensus 148 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 148 SYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence 78889988765442 3589999999999999864322110000 001124689999999999999864
No 190
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=1.4e-21 Score=173.17 Aligned_cols=224 Identities=17% Similarity=0.081 Sum_probs=150.8
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc-hhhhcc---ccCCCCeEEEEccCCCChHhHHHHh-----
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTL---SKDNPSLQIVKADVTEGSAKLSEAI----- 132 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~-~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~----- 132 (301)
.++++|++|||||+|+||++++++|+++|++|++.++... ..++.. .....++.++.+|++| .+++.+.+
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~ 86 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVG 86 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999887543 222221 1134578899999999 65555544
Q ss_pred -cCCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----c-------CCCEEEEecccccccccCCC
Q 022216 133 -GDDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----R-------GVNRFILISSILVNGAAMGQ 192 (301)
Q Consensus 133 -~~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~-------~~~~iV~~SS~~~~~~~~~~ 192 (301)
+. +|+||||||.... ++|...+++|+.+++++++++.. . ..++||++||...+...
T Consensus 87 ~g~-iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 162 (306)
T PRK07792 87 LGG-LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP--- 162 (306)
T ss_pred hCC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC---
Confidence 45 9999999997542 24566789999999999998732 1 12589999998643211
Q ss_pred CCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecccc-ccccCCCCHHHHHHHH
Q 022216 193 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETED-TLYEGTISRDQVAEVA 264 (301)
Q Consensus 193 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~-~~~~~~v~~~Dva~~~ 264 (301)
.....|+.+|.+.+.+.+ .+||+++.|.|| +.+++........... .....+++++|+|.++
T Consensus 163 ---------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v 232 (306)
T PRK07792 163 ---------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVEAGGIDPLSPEHVVPLV 232 (306)
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchhhhhccCCCCHHHHHHHH
Confidence 113568889998886543 368999999999 4555432211100000 1112356899999998
Q ss_pred HHHhcCC--CCCCcEEEeecCC---------------CCCCcCHHHHHHHhhc
Q 022216 265 VEALLHP--ESSYKVVEIISRV---------------DAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 265 ~~~l~~~--~~~~~~~~v~~~~---------------~~~~~s~~e~~~~i~~ 300 (301)
..++... ...++++.+.++. ++..++.+|+.+.+.+
T Consensus 233 ~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (306)
T PRK07792 233 QFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRD 285 (306)
T ss_pred HHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHH
Confidence 6555432 2345566654321 1256788888877653
No 191
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=1.2e-21 Score=169.19 Aligned_cols=207 Identities=15% Similarity=0.098 Sum_probs=141.8
Q ss_pred cccCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEeCCc-----------hh---hhccccCCCCeEEEEccCCCChH
Q 022216 63 SVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLD-----------KA---KTTLSKDNPSLQIVKADVTEGSA 126 (301)
Q Consensus 63 ~~~~~~vlVtGatG--~iG~~~~~~l~~~G~~V~~~~r~~~-----------~~---~~~~~~~~~~~~~~~~Dl~~~~~ 126 (301)
++++|+||||||+| +||.+++++|+++|++|+++.|++. .. .........++.++.+|++| .+
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~ 80 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ-PY 80 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC-HH
Confidence 34678999999995 8999999999999999999988721 11 11111123568999999999 66
Q ss_pred hHHHHhcC------CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc----CCCEEEEecccccccc
Q 022216 127 KLSEAIGD------DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR----GVNRFILISSILVNGA 188 (301)
Q Consensus 127 ~~~~~~~~------~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~----~~~~iV~~SS~~~~~~ 188 (301)
++..++.. ++|+||||||.... ++++..+++|+.++.++++++.+. +.++||++||...+..
T Consensus 81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 160 (256)
T PRK12748 81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP 160 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence 55544432 39999999986432 124456789999999999998532 3469999999865432
Q ss_pred cCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccc-cccccCCCCHHHH
Q 022216 189 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE-DTLYEGTISRDQV 260 (301)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~-~~~~~~~v~~~Dv 260 (301)
. .....|..+|.+.+.+++ ..+++++.|+||.+.++........... ......+..++|+
T Consensus 161 ~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T PRK12748 161 M------------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDA 228 (256)
T ss_pred C------------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHH
Confidence 1 124578999999987654 2589999999999988754322111000 1111234678999
Q ss_pred HHHHHHHhcCCC--CCCcEEEeec
Q 022216 261 AEVAVEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 261 a~~~~~~l~~~~--~~~~~~~v~~ 282 (301)
|+++..++.... ..++++++.+
T Consensus 229 a~~~~~l~~~~~~~~~g~~~~~d~ 252 (256)
T PRK12748 229 ARLIAFLVSEEAKWITGQVIHSEG 252 (256)
T ss_pred HHHHHHHhCcccccccCCEEEecC
Confidence 999865554322 2356677654
No 192
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=3.9e-22 Score=172.63 Aligned_cols=193 Identities=12% Similarity=0.123 Sum_probs=131.4
Q ss_pred cccCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEeCCc---hhhhccccCCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG--~iG~~~~~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
.+++|+++||||++ +||++++++|+++|++|++..|+.. ..+++..+. ....++++|++| .+++.+.+..
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~-g~~~~~~~Dv~~-~~~v~~~~~~~~~ 82 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI-GCNFVSELDVTN-PKSISNLFDDIKE 82 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc-CCceEEEccCCC-HHHHHHHHHHHHH
Confidence 34689999999997 8999999999999999998887632 122222111 223467899999 6665555432
Q ss_pred ---CCCEEEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcc
Q 022216 135 ---DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|++|||||.... ++|+..+++|+.+.+.+++++... ..++||++||..... +
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~---~------ 153 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK---V------ 153 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc---C------
Confidence 49999999986421 245567899999999999887432 226999999975321 1
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-----ec-cccccccCCCCHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----ME-TEDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-----~~-~~~~~~~~~v~~~Dva~~~ 264 (301)
...+..|+.+|.+.+.+.+ .+||+++.|.||.+.+++...... .. ........+..++|+|+++
T Consensus 154 ---~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~ 230 (260)
T PRK06603 154 ---IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAA 230 (260)
T ss_pred ---CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 1124568888888876543 468999999999999875321000 00 0011123357899999999
Q ss_pred HHHhc
Q 022216 265 VEALL 269 (301)
Q Consensus 265 ~~~l~ 269 (301)
+.++.
T Consensus 231 ~~L~s 235 (260)
T PRK06603 231 VYLFS 235 (260)
T ss_pred HHHhC
Confidence 66554
No 193
>PRK08264 short chain dehydrogenase; Validated
Probab=99.88 E-value=1.5e-21 Score=166.56 Aligned_cols=183 Identities=26% Similarity=0.316 Sum_probs=141.3
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC--CCCEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAV 139 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~V 139 (301)
++.+++++||||+|+||+++++.|+++|+ +|++++|+.++..+ ...++.++.+|++| .+++.+.+.. ++|+|
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTD-PASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCC-HHHHHHHHHhcCCCCEE
Confidence 34678999999999999999999999999 99999998776543 23578999999999 7777776654 48999
Q ss_pred EEccCC-CCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 140 VCATGF-QPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 140 i~~Ag~-~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
||+||. ... +++...+++|+.++.++++++. +.+.++||++||...+... .....
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~------------~~~~~ 145 (238)
T PRK08264 78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF------------PNLGT 145 (238)
T ss_pred EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC------------CCchH
Confidence 999997 221 2344567899999999999874 3456789999998654321 22467
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
|+.+|.+.+.+.+ ..++++++++||.+.+++.... ....++++|+++.++..+..+
T Consensus 146 y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~---------~~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 146 YSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL---------DAPKASPADVARQILDALEAG 208 (238)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC---------CcCCCCHHHHHHHHHHHHhCC
Confidence 8999999986553 2589999999999988763321 112578899999998888754
No 194
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.88 E-value=1e-21 Score=191.37 Aligned_cols=207 Identities=15% Similarity=0.144 Sum_probs=148.6
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEcc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT 143 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~A 143 (301)
..|+||||||+||||+++++.|.++|++|... .+|++| .+.+.+.+.. ++|+|||||
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------~~~l~d-~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------KGRLED-RSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------cccccc-HHHHHHHHHhhCCCEEEECC
Confidence 45799999999999999999999999987311 146778 6778777764 599999999
Q ss_pred CCCCC-------CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccC------CCCCCcchhhcchhhHHHHH
Q 022216 144 GFQPG-------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAM------GQILNPAYIFLNVFGLTLIA 210 (301)
Q Consensus 144 g~~~~-------~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~------~~~~~~~~~~~~~~~~y~~s 210 (301)
+.... .++...+++|+.|+.+++++|++.++ ++|++||.++|+... +.+..++..+..+.+.|+.+
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s 515 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT 515 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence 86531 24556789999999999999999998 577888888886421 22444444444445789999
Q ss_pred HHHHHHHHHHcCCcEEEEecCcccCCCCCC--cee---eccc--cccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecC
Q 022216 211 KLQAEQYIRKSGINYTIIRPGGLRNEPPTG--NII---METE--DTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR 283 (301)
Q Consensus 211 K~~~e~~~~~~~i~~~~irpg~v~~~~~~~--~~~---~~~~--~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~ 283 (301)
|.++|++++.+ .++.++|..++++....+ .+. .... -....+....+|+..+++.++..+ .+++||++++
T Consensus 516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~~--~~giyni~~~ 592 (668)
T PLN02260 516 KAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNP 592 (668)
T ss_pred HHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHhC--CCceEEecCC
Confidence 99999998766 366777777777532111 110 0000 111234567788888877777643 2579999996
Q ss_pred CCCCCcCHHHHHHHhhc
Q 022216 284 VDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 284 ~~~~~~s~~e~~~~i~~ 300 (301)
..+||.|+++.|.+
T Consensus 593 ---~~~s~~e~a~~i~~ 606 (668)
T PLN02260 593 ---GVVSHNEILEMYKD 606 (668)
T ss_pred ---CcCcHHHHHHHHHH
Confidence 78999999998865
No 195
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.88 E-value=5.2e-22 Score=168.54 Aligned_cols=201 Identities=14% Similarity=0.113 Sum_probs=147.5
Q ss_pred EEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC--CCCEEEEccCC
Q 022216 70 FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCATGF 145 (301)
Q Consensus 70 lVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vi~~Ag~ 145 (301)
|||||+|+||++++++|+++|++|++++|+.+..+..... ...+++++.+|++| .+++.+++.. ++|++|||+|.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~id~li~~ag~ 79 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITD-EAAVDAFFAEAGPFDHVVITAAD 79 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHhcCCCCEEEECCCC
Confidence 6999999999999999999999999999987665543221 13578899999999 7888877764 48999999986
Q ss_pred CCC--------CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHH
Q 022216 146 QPG--------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY 217 (301)
Q Consensus 146 ~~~--------~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 217 (301)
... +++..++++|+.++.+++++....+.++||++||...+... .+...|..+|.+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~------------~~~~~Y~~sK~a~~~~ 147 (230)
T PRK07041 80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS------------ASGVLQGAINAALEAL 147 (230)
T ss_pred CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC------------CcchHHHHHHHHHHHH
Confidence 432 23556788999999999996665556899999998765321 2246788999999877
Q ss_pred HHH-----cCCcEEEEecCcccCCCCCCceeec--------cccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecC
Q 022216 218 IRK-----SGINYTIIRPGGLRNEPPTGNIIME--------TEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR 283 (301)
Q Consensus 218 ~~~-----~~i~~~~irpg~v~~~~~~~~~~~~--------~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~ 283 (301)
.+. .+++++.++||.+.+++........ ..........+++|+|++++.++.++...++++++.++
T Consensus 148 ~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg 226 (230)
T PRK07041 148 ARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGFTTGSTVLVDGG 226 (230)
T ss_pred HHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCCC
Confidence 653 3689999999999887532110000 00001112457899999998888765556778887764
No 196
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.8e-21 Score=168.01 Aligned_cols=204 Identities=15% Similarity=0.123 Sum_probs=140.8
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
+++++|+||||+|+||.+++++|+++|++|++++|+....++..... ...++++|++| .+++.+.+.. ++|
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV--GGLFVPTDVTD-EDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCcEEEeeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 56899999999999999999999999999999999876654433211 23678999999 7776666542 489
Q ss_pred EEEEccCCCCC----------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccc-cccccCCCCCCcchhhcc
Q 022216 138 AVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSIL-VNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 138 ~Vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~-~~~~~~~~~~~~~~~~~~ 202 (301)
+||||||.... ++++..+++|+.++.++++++. +.+.+++|++||.. +++.. .
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~------------~ 149 (255)
T PRK06057 82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA------------T 149 (255)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC------------C
Confidence 99999986421 1245667899999988888763 34557999999964 33321 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccc-------cccccCCCCHHHHHHHHHHHh
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE-------DTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~-------~~~~~~~v~~~Dva~~~~~~l 268 (301)
....|..+|.+.+.+.+ ..|+++++|+||++.++........... ......+.+++|+|+++..++
T Consensus 150 ~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 229 (255)
T PRK06057 150 SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLA 229 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 13457888876654432 3589999999999999864332111000 001124678999999986666
Q ss_pred cCCC--CCCcEEEeec
Q 022216 269 LHPE--SSYKVVEIIS 282 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~ 282 (301)
.... ..++.+.+.+
T Consensus 230 ~~~~~~~~g~~~~~~~ 245 (255)
T PRK06057 230 SDDASFITASTFLVDG 245 (255)
T ss_pred CccccCccCcEEEECC
Confidence 4432 3355555544
No 197
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.88 E-value=8.4e-22 Score=166.86 Aligned_cols=194 Identities=18% Similarity=0.219 Sum_probs=145.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCC--CCeEEEEccCCCCh------HhHHHHhc
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGS------AKLSEAIG 133 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~------~~~~~~~~ 133 (301)
.+.+|++||||||++|+|++++.+|+++|.++++.+.+.+..++...... ..+..+.+|++|.+ +.+++.++
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46679999999999999999999999999999998988876655332211 37999999999932 34445555
Q ss_pred CCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 134 DDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 134 ~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
+ +|++|||||+.+. ++.+..+++|+.|.+...++. .+.+-++||.++|.+.+- +.+
T Consensus 114 ~-V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~---g~~-------- 181 (300)
T KOG1201|consen 114 D-VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF---GPA-------- 181 (300)
T ss_pred C-ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc---CCc--------
Confidence 5 9999999998653 234567899999988887776 444568999999987432 211
Q ss_pred chhhHHHHHHHHHHHHH-------H---HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 202 NVFGLTLIAKLQAEQYI-------R---KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~-------~---~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
....|..||.++..+. + ..||+.+.+.|+.+.+.+..+ ....+.+.+.+.++.+|+.++.++..+
T Consensus 182 -gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~----~~~~~~l~P~L~p~~va~~Iv~ai~~n 256 (300)
T KOG1201|consen 182 -GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG----ATPFPTLAPLLEPEYVAKRIVEAILTN 256 (300)
T ss_pred -cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC----CCCCccccCCCCHHHHHHHHHHHHHcC
Confidence 2355667777664332 1 257999999999999887766 222334457899999999999998776
Q ss_pred C
Q 022216 272 E 272 (301)
Q Consensus 272 ~ 272 (301)
+
T Consensus 257 ~ 257 (300)
T KOG1201|consen 257 Q 257 (300)
T ss_pred C
Confidence 5
No 198
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1e-21 Score=168.27 Aligned_cols=193 Identities=17% Similarity=0.154 Sum_probs=138.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHh--------cC--C
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI--------GD--D 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~~--~ 135 (301)
+|++|||||+|+||++++++|+++|++|++++|+..+.. ......++.++++|++| .+++.+.+ .. +
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AAAAGERLAEVELDLSD-AAAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hhccCCeEEEEEeccCC-HHHHHHHHHHHHHHHhccCCC
Confidence 368999999999999999999999999999999865422 11134578899999999 66665532 21 4
Q ss_pred CCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
+|++|||||.... ++++..+++|+.+...+++.+. +.+.++||++||...+.. ..
T Consensus 78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~ 145 (243)
T PRK07023 78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA------------YA 145 (243)
T ss_pred ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC------------CC
Confidence 8999999986432 2346778999999877766664 344579999999865421 12
Q ss_pred hhhHHHHHHHHHHHHHH------HcCCcEEEEecCcccCCCCCCceeec----c------ccccccCCCCHHHHHHHHHH
Q 022216 203 VFGLTLIAKLQAEQYIR------KSGINYTIIRPGGLRNEPPTGNIIME----T------EDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~------~~~i~~~~irpg~v~~~~~~~~~~~~----~------~~~~~~~~v~~~Dva~~~~~ 266 (301)
.+..|+.+|...|.+++ ..+++++.|+||.+.+++........ . ........+.++|+|+.++.
T Consensus 146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 225 (243)
T PRK07023 146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIA 225 (243)
T ss_pred CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHH
Confidence 35789999999998775 25899999999999887532100000 0 00001235789999998778
Q ss_pred HhcCCCC
Q 022216 267 ALLHPES 273 (301)
Q Consensus 267 ~l~~~~~ 273 (301)
+|.++..
T Consensus 226 ~l~~~~~ 232 (243)
T PRK07023 226 YLLSDDF 232 (243)
T ss_pred HHhcccc
Confidence 8887753
No 199
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.88 E-value=7e-22 Score=170.89 Aligned_cols=206 Identities=16% Similarity=0.244 Sum_probs=144.0
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc----cCCCCeEEEEccCCCChHhHHHHhcC--CC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD--DS 136 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~ 136 (301)
.+++|+++|||++|+||+++++.|+++|++|++++|+.++.++... ....++.++.+|++| .+++.+++.. ++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~g~i 82 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEAGDI 82 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHhCCC
Confidence 3568999999999999999999999999999999998776554322 123568899999999 7777665543 49
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|++|||||.... ++|...+++|+.+.+++++++ ++.+.++||++||.... .+ ...+
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~---~~---------~~~~ 150 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE---NP---------DADY 150 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc---CC---------CCCc
Confidence 999999996432 245667899999999998887 33444689999987521 11 1224
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCce------eecc--------ccccccCCCCHHHHHHH
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI------IMET--------EDTLYEGTISRDQVAEV 263 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~------~~~~--------~~~~~~~~v~~~Dva~~ 263 (301)
..|..+|.+.+.+.+ ..|++++.|+||.+.++...... .... .......+.+++|+|++
T Consensus 151 ~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 230 (259)
T PRK06125 151 ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADL 230 (259)
T ss_pred hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHH
Confidence 567888888876554 35899999999999987421100 0000 01112345689999999
Q ss_pred HHHHhcCCC---CCCcEEEeec
Q 022216 264 AVEALLHPE---SSYKVVEIIS 282 (301)
Q Consensus 264 ~~~~l~~~~---~~~~~~~v~~ 282 (301)
++.++ ++. ..+.++.+.+
T Consensus 231 ~~~l~-~~~~~~~~G~~i~vdg 251 (259)
T PRK06125 231 VAFLA-SPRSGYTSGTVVTVDG 251 (259)
T ss_pred HHHHc-CchhccccCceEEecC
Confidence 86655 433 3444555543
No 200
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.88 E-value=9e-22 Score=168.79 Aligned_cols=206 Identities=17% Similarity=0.154 Sum_probs=138.1
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEe-CCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r-~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
|++|+++||||+|+||++++++|+++|++|++..+ +.....+... .....+..+.+|++| .+++.+.+.+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 35799999999999999999999999999987543 3322222111 134567788999999 6666555431
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||.... ++++.++++|+.+++++.+++ ++.+.++||++||..... + .
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---~---------~ 147 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK---G---------Q 147 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC---C---------C
Confidence 39999999997432 245667899999988877766 345667999999975321 1 1
Q ss_pred chhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee----eccccccccCCCCHHHHHHHHHHHhcC
Q 022216 202 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----METEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~----~~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
..+..|..+|.+.+.+.+ ..|++++.|+||++.++....... ..........+.+++|+++++..++..
T Consensus 148 ~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~ 227 (246)
T PRK12938 148 FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASE 227 (246)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCc
Confidence 224678888987776543 368999999999999986432100 000011122356899999998655533
Q ss_pred CC--CCCcEEEeec
Q 022216 271 PE--SSYKVVEIIS 282 (301)
Q Consensus 271 ~~--~~~~~~~v~~ 282 (301)
+. ..++++.+.+
T Consensus 228 ~~~~~~g~~~~~~~ 241 (246)
T PRK12938 228 ESGFSTGADFSLNG 241 (246)
T ss_pred ccCCccCcEEEECC
Confidence 22 3455555543
No 201
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=1.8e-21 Score=167.39 Aligned_cols=206 Identities=16% Similarity=0.122 Sum_probs=146.4
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
++++++|||||+|+||+++++.|+++|++|++++|+..+.++... ....++.++.+|++| .+++.+.+..
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999998765544322 124578889999999 6665544432
Q ss_pred CCCEEEEccCCCCC-----------------CCCCCceeeehHHHHHHHHHHH----Hc-CCCEEEEecccccccccCCC
Q 022216 135 DSEAVVCATGFQPG-----------------WDLFAPWKVDNFGTVNLVEACR----KR-GVNRFILISSILVNGAAMGQ 192 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~-----------------~~~~~~~~~N~~g~~~l~~a~~----~~-~~~~iV~~SS~~~~~~~~~~ 192 (301)
++|+||||||.... +++..++++|+.++.++++++. +. ..++||++||...|+..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~--- 158 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM--- 158 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC---
Confidence 38999999995321 1223456899999988877653 22 23579999998655321
Q ss_pred CCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec----cccccccCCCCHHHHH
Q 022216 193 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME----TEDTLYEGTISRDQVA 261 (301)
Q Consensus 193 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~----~~~~~~~~~v~~~Dva 261 (301)
....|..+|.+.+.+.+ ..+++++.++||.+.+++........ ........+.+++|+|
T Consensus 159 ----------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 228 (253)
T PRK08217 159 ----------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIA 228 (253)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHH
Confidence 23568899998886643 36899999999999988653211000 0011122356899999
Q ss_pred HHHHHHhcCCCCCCcEEEeecC
Q 022216 262 EVAVEALLHPESSYKVVEIISR 283 (301)
Q Consensus 262 ~~~~~~l~~~~~~~~~~~v~~~ 283 (301)
+++..++.+....++++++.++
T Consensus 229 ~~~~~l~~~~~~~g~~~~~~gg 250 (253)
T PRK08217 229 HTVRFIIENDYVTGRVLEIDGG 250 (253)
T ss_pred HHHHHHHcCCCcCCcEEEeCCC
Confidence 9998888665557788887764
No 202
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=8.2e-22 Score=170.74 Aligned_cols=193 Identities=18% Similarity=0.266 Sum_probs=132.9
Q ss_pred ccCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEeCCc---hhhhccccCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG--~iG~~~~~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++|+++||||++ +||++++++|+++|++|++.+|+.. ..+++.. ......++.+|++| .+++.+.+..
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 81 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAA-QLGSDIVLPCDVAE-DASIDAMFAELGKV 81 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHh-ccCCceEeecCCCC-HHHHHHHHHHHHhh
Confidence 5689999999985 9999999999999999998888631 1222221 22346788999999 7666655432
Q ss_pred --CCCEEEEccCCCCC-------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcc
Q 022216 135 --DSEAVVCATGFQPG-------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~-------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|++|||||+... ++|+..+++|+.+.+.+.+++... ..++||++||.+.. .+
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~---~~------ 152 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE---RA------ 152 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC---CC------
Confidence 49999999996431 133456789999999998887432 23689999997522 11
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee----c--cccccccCCCCHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----E--TEDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~----~--~~~~~~~~~v~~~Dva~~~ 264 (301)
...+..|+.+|.+.+.+.+ ..||+++.|.||.+.+++....... . ........+..++|+|+++
T Consensus 153 ---~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~ 229 (262)
T PRK07984 153 ---IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSA 229 (262)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHH
Confidence 1124578899999886653 3689999999999998753211000 0 0011223467899999999
Q ss_pred HHHhcC
Q 022216 265 VEALLH 270 (301)
Q Consensus 265 ~~~l~~ 270 (301)
+.++..
T Consensus 230 ~~L~s~ 235 (262)
T PRK07984 230 AFLCSD 235 (262)
T ss_pred HHHcCc
Confidence 665543
No 203
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.88 E-value=9.3e-22 Score=168.48 Aligned_cols=187 Identities=19% Similarity=0.235 Sum_probs=138.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc----cCCCCeEEEEccCCCChHhHHHHhcC---CCCE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD---DSEA 138 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~ 138 (301)
+|+++||||+|+||.+++++|+++|++|++++|++++.+.... ....++.++++|++| .+++.+.+.+ ++|+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSLPALPDI 79 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHHhhcCCE
Confidence 4789999999999999999999999999999998876544322 124578999999999 6666665543 3899
Q ss_pred EEEccCCCCCC--------CCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 139 VVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 139 Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
||||||..... ++...+++|+.++.++++++.+ .+.++||++||..... +. .....
T Consensus 80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~---------~~~~~ 147 (243)
T PRK07102 80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR---GR---------ASNYV 147 (243)
T ss_pred EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC---CC---------CCCcc
Confidence 99999864321 1234578999999999988743 4568999999975321 11 11245
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
|+.+|.+.+.+.+ +.|++++.|+||++.++...+. .......++++|+|+.++..+.++
T Consensus 148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~------~~~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL------KLPGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc------CCCccccCCHHHHHHHHHHHHhCC
Confidence 7888888775543 4589999999999999854321 001123578999999999888865
No 204
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.88 E-value=2e-21 Score=169.38 Aligned_cols=195 Identities=15% Similarity=0.177 Sum_probs=138.1
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchh-------hhc---cccCCCCeEEEEccCCCChHhHHHHh
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-------KTT---LSKDNPSLQIVKADVTEGSAKLSEAI 132 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~-------~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~ 132 (301)
.+++|+++||||+|+||+++++.|+++|++|++++|+.+.. .+. ......++.++.+|++| .+++.+.+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~ 81 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAV 81 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHH
Confidence 35689999999999999999999999999999999976431 111 11134578899999999 66666555
Q ss_pred cC------CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCC
Q 022216 133 GD------DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQIL 194 (301)
Q Consensus 133 ~~------~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~ 194 (301)
.. ++|+||||||.... ++++.++++|+.++.++++++.. .+.++||++||..... .
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---~--- 155 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---P--- 155 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---c---
Confidence 41 39999999996432 23456788999999999999853 3346899999864211 1
Q ss_pred CcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecC-cccCCCCCCceeeccccccccCCCCHHHHHHHHHH
Q 022216 195 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPG-GLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 195 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg-~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~ 266 (301)
.+ ...+..|+.+|.+.|.+.+ .++++++.|.|| .+.++...... ........+..++|+|+.++.
T Consensus 156 --~~--~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~---~~~~~~~~~~~p~~va~~~~~ 228 (273)
T PRK08278 156 --KW--FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLL---GGDEAMRRSRTPEIMADAAYE 228 (273)
T ss_pred --cc--cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcc---cccccccccCCHHHHHHHHHH
Confidence 00 0235679999999997664 358999999999 46665322211 111122346789999999987
Q ss_pred HhcCC
Q 022216 267 ALLHP 271 (301)
Q Consensus 267 ~l~~~ 271 (301)
++..+
T Consensus 229 l~~~~ 233 (273)
T PRK08278 229 ILSRP 233 (273)
T ss_pred HhcCc
Confidence 77654
No 205
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.88 E-value=4.3e-21 Score=163.59 Aligned_cols=201 Identities=19% Similarity=0.217 Sum_probs=143.7
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccC--CCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+.+++++||||+|+||++++++|+++|++|++++|++++..+..... ..++.++.+|++| .+++.+.+++ +
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 34789999999999999999999999999999999886655433211 1578899999999 7666665541 3
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH---cCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
+|+|||++|.... +++...+++|+.++.++++++.+ .+.++||++||...+... ...
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------~~~ 150 (237)
T PRK07326 83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF------------AGG 150 (237)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC------------CCC
Confidence 9999999986432 12345688999999999888753 345789999998643211 123
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCCC-CCc
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPES-SYK 276 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~-~~~ 276 (301)
..|..+|.+.+.+.+ ..|+++++|+||++.++...... ... ....++++|+++.++.++..+.. ...
T Consensus 151 ~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~---~~~--~~~~~~~~d~a~~~~~~l~~~~~~~~~ 225 (237)
T PRK07326 151 AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP---SEK--DAWKIQPEDIAQLVLDLLKMPPRTLPS 225 (237)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc---chh--hhccCCHHHHHHHHHHHHhCCcccccc
Confidence 567788887665443 36899999999999887543321 111 11247899999999999877652 233
Q ss_pred EEEeec
Q 022216 277 VVEIIS 282 (301)
Q Consensus 277 ~~~v~~ 282 (301)
...+.+
T Consensus 226 ~~~~~~ 231 (237)
T PRK07326 226 KIEVRP 231 (237)
T ss_pred ceEEec
Confidence 444443
No 206
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.88 E-value=7e-22 Score=167.21 Aligned_cols=176 Identities=15% Similarity=0.100 Sum_probs=130.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC---CCCEEEEcc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCAT 143 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~Vi~~A 143 (301)
|+++||||+|+||+++++.|+++|++|++++|+.+++++... ..++.++++|++| .+++.+.++. ++|++||||
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~v~~~~~~~~~~id~lv~~a 77 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK--ELDVDAIVCDNTD-PASLEEARGLFPHHLDTIVNVP 77 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--hccCcEEecCCCC-HHHHHHHHHHHhhcCcEEEECC
Confidence 479999999999999999999999999999998777655432 1246788999999 7777776642 399999999
Q ss_pred CCCC-------------CCCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHHH
Q 022216 144 GFQP-------------GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (301)
Q Consensus 144 g~~~-------------~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~ 208 (301)
|... .++|+..+++|+.+++++++++.+. ..++||++||... + ....|.
T Consensus 78 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-------~---------~~~~Y~ 141 (223)
T PRK05884 78 APSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-------P---------AGSAEA 141 (223)
T ss_pred CccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC-------C---------CccccH
Confidence 7411 1245677899999999999998542 2369999999640 0 124677
Q ss_pred HHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhc
Q 022216 209 IAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 209 ~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
.+|.+.+.+.+ .+|++++.|.||++.+++.... .. .+...++|+++++..++.
T Consensus 142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~------~~--~p~~~~~~ia~~~~~l~s 201 (223)
T PRK05884 142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL------SR--TPPPVAAEIARLALFLTT 201 (223)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc------cC--CCCCCHHHHHHHHHHHcC
Confidence 88888775543 4689999999999988753211 01 112378999999965543
No 207
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.88 E-value=2.5e-21 Score=164.89 Aligned_cols=206 Identities=26% Similarity=0.343 Sum_probs=149.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch--hhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCC
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~ 146 (301)
|+|+||||.+|+.+++.|++.|++|+++.|+..+ ..++. ..+++++.+|+.| .+++.++|++ +|.||.+.+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~---~~g~~vv~~d~~~-~~~l~~al~g-~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ---ALGAEVVEADYDD-PESLVAALKG-VDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH---HTTTEEEES-TT--HHHHHHHHTT-CSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh---cccceEeecccCC-HHHHHHHHcC-CceEEeecCcc
Confidence 7999999999999999999999999999999854 22222 2577889999999 8999999999 99999988754
Q ss_pred CCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEE
Q 022216 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (301)
Q Consensus 147 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~ 226 (301)
. ........++++||++.|+++||+.|....+.... . ..+...+...|...|+++++.+++++
T Consensus 76 ~--------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~-----~----~~p~~~~~~~k~~ie~~l~~~~i~~t 138 (233)
T PF05368_consen 76 H--------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESS-----G----SEPEIPHFDQKAEIEEYLRESGIPYT 138 (233)
T ss_dssp C--------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTT-----T----STTHHHHHHHHHHHHHHHHHCTSEBE
T ss_pred h--------hhhhhhhhhHHHhhhccccceEEEEEecccccccc-----c----ccccchhhhhhhhhhhhhhhccccce
Confidence 3 22356679999999999999999755543321100 0 01123345689999999999999999
Q ss_pred EEecCcccCCC----------CCC--ceeeccccccccCC-CCHHHHHHHHHHHhcCCCCC--CcEEEeecCCCCCCcCH
Q 022216 227 IIRPGGLRNEP----------PTG--NIIMETEDTLYEGT-ISRDQVAEVAVEALLHPESS--YKVVEIISRVDAPKRSY 291 (301)
Q Consensus 227 ~irpg~v~~~~----------~~~--~~~~~~~~~~~~~~-v~~~Dva~~~~~~l~~~~~~--~~~~~v~~~~~~~~~s~ 291 (301)
+||||.++... ... .+.+.........+ ++.+|+|+++..+|.+|... ++.+.+.+ +.+|+
T Consensus 139 ~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~----~~~t~ 214 (233)
T PF05368_consen 139 IIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG----ETLTY 214 (233)
T ss_dssp EEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG----GEEEH
T ss_pred eccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC----CCCCH
Confidence 99999776531 111 12222222211123 58999999999999987643 56666655 88999
Q ss_pred HHHHHHhhc
Q 022216 292 EDLFGSIKQ 300 (301)
Q Consensus 292 ~e~~~~i~~ 300 (301)
+|+++.+++
T Consensus 215 ~eia~~~s~ 223 (233)
T PF05368_consen 215 NEIAAILSK 223 (233)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999876
No 208
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.88 E-value=5.6e-21 Score=164.77 Aligned_cols=188 Identities=19% Similarity=0.259 Sum_probs=134.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCch-hhhcc----ccCCCCeEEEEccCCCChHhHHHHhc-----
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDK-AKTTL----SKDNPSLQIVKADVTEGSAKLSEAIG----- 133 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~----- 133 (301)
++++||||||+|+||++++++|+++| ++|++++|+.+. +++.. .....+++++.+|++| .+++.+.+.
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAAFAG 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHHHhc
Confidence 46899999999999999999999995 899999998875 43322 1122378999999999 555433332
Q ss_pred CCCCEEEEccCCCCC--CCCC------CceeeehHHHHHH----HHHHHHcCCCEEEEecccccccccCCCCCCcchhhc
Q 022216 134 DDSEAVVCATGFQPG--WDLF------APWKVDNFGTVNL----VEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 134 ~~~d~Vi~~Ag~~~~--~~~~------~~~~~N~~g~~~l----~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
+++|++|||+|.... ..+. ..+++|+.++.++ ++++++.+.++||++||...+. +.
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~---~~--------- 153 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER---VR--------- 153 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC---CC---------
Confidence 149999999987532 1221 2479999998775 5555666678999999986321 11
Q ss_pred chhhHHHHHHHHHHHH-------HHHcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 202 NVFGLTLIAKLQAEQY-------IRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~-------~~~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
.....|+.+|.+.+.+ ++.+++++++|+||++.+++..... .. ...++++|+|+.++..+.++.
T Consensus 154 ~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~-----~~--~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 154 RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK-----EA--PLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC-----CC--CCCCCHHHHHHHHHHHHHcCC
Confidence 1124577888877643 3357999999999999997643211 11 135799999999999998664
No 209
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.3e-21 Score=169.48 Aligned_cols=207 Identities=18% Similarity=0.099 Sum_probs=139.9
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhc--cccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT--LSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+++|+++||||+|+||++++++|+++|++|++++|+....+.. ......++.++.+|++| .+++.+.+.. +
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999886422111 11123567889999999 7666655442 4
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|+||||||.... ++++..+++|+.++.++++++.+ .+.++||++||.... ... ...
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~--~~~---------~~~ 151 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD--MVA---------DPG 151 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc--ccC---------CCC
Confidence 9999999996432 12344688999999999998743 345799999997531 111 112
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee----------c--cccccccCCCCHHHHHHHH
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----------E--TEDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~----------~--~~~~~~~~~v~~~Dva~~~ 264 (301)
+..|+.+|.+.+.+.+ ..+++++.|+||.+.|++....... . ........+.+++|+|+++
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~ 231 (263)
T PRK08226 152 ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELA 231 (263)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence 4568888988876653 2489999999999999854321100 0 0011122356899999998
Q ss_pred HHHhcCC--CCCCcEEEeec
Q 022216 265 VEALLHP--ESSYKVVEIIS 282 (301)
Q Consensus 265 ~~~l~~~--~~~~~~~~v~~ 282 (301)
+.++... ...++++.+.+
T Consensus 232 ~~l~~~~~~~~~g~~i~~dg 251 (263)
T PRK08226 232 AFLASDESSYLTGTQNVIDG 251 (263)
T ss_pred HHHcCchhcCCcCceEeECC
Confidence 6555322 23344444433
No 210
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=1.2e-21 Score=169.58 Aligned_cols=193 Identities=16% Similarity=0.184 Sum_probs=131.6
Q ss_pred ccCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEeC---CchhhhccccCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRD---LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 64 ~~~~~vlVtGa--tG~iG~~~~~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++|++||||| +++||++++++|+++|++|++..|. .+.++++..+. .....+.+|++| .+++.+++..
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d-~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-GSDLVFPCDVAS-DEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc-CCcceeeccCCC-HHHHHHHHHHHHHH
Confidence 46899999996 6899999999999999999987653 23333322211 233578999999 6666555432
Q ss_pred --CCCEEEEccCCCCC-------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcc
Q 022216 135 --DSEAVVCATGFQPG-------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~-------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|++|||||.... ++|+..+++|+.+.+.+++++... +.++||++||.... .+
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~---~~------ 152 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE---RV------ 152 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc---cC------
Confidence 49999999996421 234567899999999999988542 23689999997532 11
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVA 264 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~ 264 (301)
...+..|..+|.+.+.+.+ .+|++++.|.||.+.+++........ ........+..++|+|+++
T Consensus 153 ---~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~ 229 (260)
T PRK06997 153 ---VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVA 229 (260)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHH
Confidence 1124568889998876553 36899999999999987532210000 0011122356899999999
Q ss_pred HHHhcC
Q 022216 265 VEALLH 270 (301)
Q Consensus 265 ~~~l~~ 270 (301)
..++..
T Consensus 230 ~~l~s~ 235 (260)
T PRK06997 230 AFLLSD 235 (260)
T ss_pred HHHhCc
Confidence 665543
No 211
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.8e-21 Score=172.48 Aligned_cols=216 Identities=18% Similarity=0.102 Sum_probs=139.4
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
++++|+|+||||+||||++++++|+++|++|++++|+.++.++.... ...++.++.+|++| .+++.+.+..
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~ 91 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRA 91 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999987654432111 13468899999999 6666655432
Q ss_pred ---CCCEEEEccCCCC------CCCCCCceeeehHHHHHH----HHHHHHcCCCEEEEecccccccccCCCCC-Ccchhh
Q 022216 135 ---DSEAVVCATGFQP------GWDLFAPWKVDNFGTVNL----VEACRKRGVNRFILISSILVNGAAMGQIL-NPAYIF 200 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~------~~~~~~~~~~N~~g~~~l----~~a~~~~~~~~iV~~SS~~~~~~~~~~~~-~~~~~~ 200 (301)
++|+||||||... .++++..+++|+.|.+.+ ++.+++.+.++||++||...+........ .....+
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~ 171 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERR 171 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccC
Confidence 3999999999642 235667889999995554 44455555679999999875421111000 000112
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEE--EecCcccCCCCCCceeec-cccccccC--CCCHHHHHHHHHHHh
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTI--IRPGGLRNEPPTGNIIME-TEDTLYEG--TISRDQVAEVAVEAL 268 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~--irpg~v~~~~~~~~~~~~-~~~~~~~~--~v~~~Dva~~~~~~l 268 (301)
..+...|+.+|++.+.+.+ ..++++++ ++||.+.|++..+..... ........ ...+++-+..++.+.
T Consensus 172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 251 (306)
T PRK06197 172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRAA 251 (306)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHh
Confidence 3456789999999886553 24666655 479999998754321100 00000011 245676776666665
Q ss_pred cCCC-CCCcEEE
Q 022216 269 LHPE-SSYKVVE 279 (301)
Q Consensus 269 ~~~~-~~~~~~~ 279 (301)
.++. ..+..|+
T Consensus 252 ~~~~~~~g~~~~ 263 (306)
T PRK06197 252 TDPAVRGGQYYG 263 (306)
T ss_pred cCCCcCCCeEEc
Confidence 5543 2344444
No 212
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.87 E-value=2.2e-21 Score=167.90 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=134.9
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
.+++|++|||||+|+||++++++|+++|++|+++.|+... ..... .....++.++.+|++| .+++.+.+..
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~ 82 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKE 82 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999988885432 22111 1124567889999999 6666554431
Q ss_pred --CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcC-CCEEEEecccccccccCCCCCCcchh
Q 022216 135 --DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRG-VNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
++|+||||||.... ++++.++++|+.+.+.+++++ ++.+ .++||++||...+.
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~------------ 150 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI------------ 150 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC------------
Confidence 49999999996432 234567899999987766654 4444 36999999975321
Q ss_pred hcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc------ccccccCCCCHHHHHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~------~~~~~~~~v~~~Dva~~~~~ 266 (301)
+...+..|+.+|.+.+.+.+ ..|++++.|+||++.+++......... .......+..++|+++.+..
T Consensus 151 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 230 (261)
T PRK08936 151 PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAW 230 (261)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 11224568888877765443 358999999999999986443211100 01122346689999999976
Q ss_pred HhcC
Q 022216 267 ALLH 270 (301)
Q Consensus 267 ~l~~ 270 (301)
++..
T Consensus 231 l~s~ 234 (261)
T PRK08936 231 LASS 234 (261)
T ss_pred HcCc
Confidence 6653
No 213
>PRK12743 oxidoreductase; Provisional
Probab=99.87 E-value=1.7e-21 Score=168.28 Aligned_cols=204 Identities=15% Similarity=0.106 Sum_probs=140.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc-hhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~-~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+|++|||||+|+||++++++|+++|++|+++.|+.. ..+... .....++.++.+|++| .+++.+++.+ +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999998866543 322221 1134578999999999 6655554432 4
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc----C-CCEEEEecccccccccCCCCCCcchhhcc
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR----G-VNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
+|+||||||.... +++..++++|+.+..++++++.+. + .++||++||..... +..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------~~~ 148 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT------------PLP 148 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC------------CCC
Confidence 9999999996432 234567899999999999987432 2 36899999975211 122
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee---e-ccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---M-ETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~---~-~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
+...|+.+|.+.+.+++ ..|++++.|+||.+.++....... . .........+.+++|+|+++..++...
T Consensus 149 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 228 (256)
T PRK12743 149 GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEG 228 (256)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence 34678899998886653 358999999999999986432100 0 000111123568999999997666433
Q ss_pred C--CCCcEEEeec
Q 022216 272 E--SSYKVVEIIS 282 (301)
Q Consensus 272 ~--~~~~~~~v~~ 282 (301)
. ..+.++.+.+
T Consensus 229 ~~~~~G~~~~~dg 241 (256)
T PRK12743 229 ASYTTGQSLIVDG 241 (256)
T ss_pred ccCcCCcEEEECC
Confidence 2 3455666554
No 214
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.7e-21 Score=167.62 Aligned_cols=195 Identities=15% Similarity=0.168 Sum_probs=140.4
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC-----CC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD-----DS 136 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 136 (301)
++++++|||||+|+||.+++++|+++|++|++++|+.+..+++... ...++.++.+|++| .+++.+.+.. ++
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999987765544321 24578899999999 6666554431 38
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|+||||||.... +++...+++|+.|+.++++++.+ .+.+++|++||...+... + ..
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~---------~~ 149 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY---P---------GY 149 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC---C---------Cc
Confidence 999999996432 12345678999999999988843 344689999997532111 1 13
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
..|+.+|.+.+.+++ ..+++++.+.||.+.++......... .........+++|+|+.++.++..+.
T Consensus 150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQAL-NRALGNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccc-cccccCCCCCHHHHHHHHHHHHhCCC
Confidence 557888887765442 36899999999999887643221100 01111245789999999999998653
No 215
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.8e-21 Score=168.55 Aligned_cols=191 Identities=14% Similarity=0.226 Sum_probs=138.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCCEE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV 139 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~V 139 (301)
+|++|||||+|+||++++++|+++|++|++++|+.++.+.+.. .++.++.+|++| .+++.+.+.. ++|+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~v 76 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA---AGFTAVQLDVND-GAALARLAEELEAEHGGLDVL 76 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence 3789999999999999999999999999999998776655432 357889999999 6666655421 39999
Q ss_pred EEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH---cCCCEEEEecccccccccCCCCCCcchhhcchhhHHH
Q 022216 140 VCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (301)
Q Consensus 140 i~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~ 208 (301)
|||||.... ++++..+++|+.|+.++++++.. .+.+++|++||...+... ...+.|.
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~ 144 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT------------PFAGAYC 144 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC------------CCccHHH
Confidence 999996432 23455688999999999998733 234789999997643211 1235688
Q ss_pred HHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee----ccccccc---------------cCCCCHHHHHH
Q 022216 209 IAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ETEDTLY---------------EGTISRDQVAE 262 (301)
Q Consensus 209 ~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~----~~~~~~~---------------~~~v~~~Dva~ 262 (301)
.+|.+.+.+.+ .+|++++.|+||.+.|+........ ......+ ....+++|+|+
T Consensus 145 ~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 224 (274)
T PRK05693 145 ASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFAR 224 (274)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHH
Confidence 89988876542 3699999999999998864432100 0000000 12368999999
Q ss_pred HHHHHhcCCC
Q 022216 263 VAVEALLHPE 272 (301)
Q Consensus 263 ~~~~~l~~~~ 272 (301)
.++.++.++.
T Consensus 225 ~i~~~~~~~~ 234 (274)
T PRK05693 225 QLLAAVQQSP 234 (274)
T ss_pred HHHHHHhCCC
Confidence 9999998654
No 216
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=3.6e-21 Score=164.88 Aligned_cols=206 Identities=20% Similarity=0.175 Sum_probs=144.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhc------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------ 133 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~------ 133 (301)
+.+|++|||||+|+||.++++.|+++|++|+++ .|+++...+... ....++.++.+|++| .+++.+.+.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999998 887765543321 123568899999999 776666554
Q ss_pred -CCCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 134 -DDSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 134 -~~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
+ +|+|||++|.... ++++..+++|+.+..++++++. +.+.++||++||...+....
T Consensus 82 ~~-id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------- 150 (247)
T PRK05565 82 GK-IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------- 150 (247)
T ss_pred CC-CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC----------
Confidence 5 9999999996532 2345678899999988888874 34457899999976543211
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc----ccccccCCCCHHHHHHHHHHHhc
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET----EDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~----~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
....|+.+|.+.+.+++ ..|+++++++||.+.++.......... .......+..++|+++.++.++.
T Consensus 151 --~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 228 (247)
T PRK05565 151 --CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLAS 228 (247)
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 13457778877665442 468999999999998875432210000 01111235689999999987775
Q ss_pred CCC--CCCcEEEeecC
Q 022216 270 HPE--SSYKVVEIISR 283 (301)
Q Consensus 270 ~~~--~~~~~~~v~~~ 283 (301)
... ..++.+++.++
T Consensus 229 ~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 229 DDASYITGQIITVDGG 244 (247)
T ss_pred CccCCccCcEEEecCC
Confidence 432 45667766653
No 217
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3.1e-21 Score=166.19 Aligned_cols=203 Identities=16% Similarity=0.132 Sum_probs=139.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHh-------cCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAI-------GDD 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~-------~~~ 135 (301)
+|+++||||+|+||+++++.|+++|++|++++|+.+..++... ....++.++.+|++| ++++.+.+ +.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~- 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR- 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC-
Confidence 4799999999999999999999999999999998766544322 123578899999999 66665544 34
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEecccccccccCCCCCCcchhhcc
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
+|+||||||.... ++|..++++|+.+++++++++.+ .+ .++||++||...+... +
T Consensus 79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---~--------- 146 (252)
T PRK07677 79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG---P--------- 146 (252)
T ss_pred ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC---C---------
Confidence 9999999985321 23566789999999999999843 22 3689999998633211 1
Q ss_pred hhhHHHHHHHHHHHHHH--------HcCCcEEEEecCcccCCCCCCceeecc-------ccccccCCCCHHHHHHHHHHH
Q 022216 203 VFGLTLIAKLQAEQYIR--------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~--------~~~i~~~~irpg~v~~~~~~~~~~~~~-------~~~~~~~~v~~~Dva~~~~~~ 267 (301)
....|+.+|.+.+.+.+ ++|++++.|+||.+.++.......... .......+..++|+|+++..+
T Consensus 147 ~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 226 (252)
T PRK07677 147 GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFL 226 (252)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Confidence 12456677777665543 358999999999998643211111000 011123467899999998665
Q ss_pred hcCC--CCCCcEEEeec
Q 022216 268 LLHP--ESSYKVVEIIS 282 (301)
Q Consensus 268 l~~~--~~~~~~~~v~~ 282 (301)
+..+ ...++++.+.+
T Consensus 227 ~~~~~~~~~g~~~~~~g 243 (252)
T PRK07677 227 LSDEAAYINGTCITMDG 243 (252)
T ss_pred cCccccccCCCEEEECC
Confidence 5432 23455565554
No 218
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.87 E-value=4.6e-21 Score=164.60 Aligned_cols=187 Identities=19% Similarity=0.237 Sum_probs=138.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+|+++||||+|+||++++++|+++|++|++++|++++.++.... ...++.++.+|++| .+++.+.+..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999988765543221 24578899999999 6666554431
Q ss_pred CCCEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||+.... ++...+++|+.+..++++++. +.+.++||++||....... + .
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~--------~ 149 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL---P--------G 149 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC---C--------C
Confidence 399999999975432 123457899999999888873 4466799999997543211 1 1
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
+...|+.+|.+.+.+.+ ..+++++.|+||++.+++....- . ....++++|.|+.++.++..+
T Consensus 150 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-----~--~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 150 VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK-----S--TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc-----c--CCccCCHHHHHHHHHHHHhcC
Confidence 23568899998876553 24799999999999988644321 0 113578999999999999764
No 219
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.8e-21 Score=166.92 Aligned_cols=207 Identities=15% Similarity=0.171 Sum_probs=138.9
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch----hhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC-
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK----AKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~----~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~- 134 (301)
.+++|++|||||+|+||.++++.|++.|++|+++.++... .++.. ...+.++.++++|++| .+++.+.+..
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~ 83 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT-AAAVEKLFDDA 83 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC-HHHHHHHHHHH
Confidence 3467999999999999999999999999998777665322 11111 1123478899999999 7666655532
Q ss_pred -----CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchh
Q 022216 135 -----DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 135 -----~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
++|+||||||.... ++++.++++|+.++..+++++.+. ..+++++++|..+....
T Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~---------- 153 (257)
T PRK12744 84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT---------- 153 (257)
T ss_pred HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC----------
Confidence 49999999996321 235567899999999999998643 12567766332211100
Q ss_pred hcchhhHHHHHHHHHHHHHHH-------cCCcEEEEecCcccCCCCCCceeec--------cccccc--cCCCCHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME--------TEDTLY--EGTISRDQVAE 262 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~irpg~v~~~~~~~~~~~~--------~~~~~~--~~~v~~~Dva~ 262 (301)
..+..|+.+|.+.|.+.+. .|++++.|+||.+.+++..+..... ...... ..+.+++|+|+
T Consensus 154 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 231 (257)
T PRK12744 154 --PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVP 231 (257)
T ss_pred --CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHH
Confidence 1236788999999876642 4799999999999887532211000 000111 14678999999
Q ss_pred HHHHHhcCCC-CCCcEEEeec
Q 022216 263 VAVEALLHPE-SSYKVVEIIS 282 (301)
Q Consensus 263 ~~~~~l~~~~-~~~~~~~v~~ 282 (301)
++..++.... ..++++++.+
T Consensus 232 ~~~~l~~~~~~~~g~~~~~~g 252 (257)
T PRK12744 232 FIRFLVTDGWWITGQTILING 252 (257)
T ss_pred HHHHhhcccceeecceEeecC
Confidence 9977666321 2356776665
No 220
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=9.9e-22 Score=169.75 Aligned_cols=204 Identities=17% Similarity=0.157 Sum_probs=137.6
Q ss_pred ccCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEeCC--chhhhccccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDL--DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGa--tG~iG~~~~~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
+++|+++|||| +++||.+++++|+++|++|++.+|+. +..++........+.++.+|++| .+++.+.+..
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 46899999999 89999999999999999999988764 22333322223467889999999 6666554421
Q ss_pred -CCCEEEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchh
Q 022216 135 -DSEAVVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
++|++|||||+... ++++..+++|+.+.+.+++++... ..++||++|+... ..
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~----~~-------- 151 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT----VA-------- 151 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc----cc--------
Confidence 49999999997521 123446899999999998887432 2368999886421 11
Q ss_pred hcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc-----cccccc--CCCCHHHHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----EDTLYE--GTISRDQVAEVAV 265 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~-----~~~~~~--~~v~~~Dva~~~~ 265 (301)
...+..|+.+|.+.+.+.+ .+||+++.|.||.+.+++......... ...... .+..++|+|++++
T Consensus 152 -~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~ 230 (256)
T PRK07889 152 -WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVV 230 (256)
T ss_pred -CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHH
Confidence 1224668889988876543 468999999999999986432110000 011111 3578999999997
Q ss_pred HHhcCCC--CCCcEEEee
Q 022216 266 EALLHPE--SSYKVVEII 281 (301)
Q Consensus 266 ~~l~~~~--~~~~~~~v~ 281 (301)
.++..+. ..++++.+.
T Consensus 231 ~l~s~~~~~~tG~~i~vd 248 (256)
T PRK07889 231 ALLSDWFPATTGEIVHVD 248 (256)
T ss_pred HHhCcccccccceEEEEc
Confidence 6664332 234444443
No 221
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.7e-21 Score=168.83 Aligned_cols=194 Identities=18% Similarity=0.103 Sum_probs=137.8
Q ss_pred cccCCeEEEEcCCc-hHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC--
Q 022216 63 SVKQKKIFVAGATG-SSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD-- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG-~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~-- 134 (301)
.+++|+++||||+| +||+++++.|+++|++|++++|+.+++++.... ...++.++++|+++ .+++.+++..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHHH
Confidence 34589999999997 899999999999999999999887665443211 12468899999999 6666655431
Q ss_pred ----CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEecccccccccCCCCCCcc
Q 022216 135 ----DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 135 ----~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
++|+||||||.... ++|...+++|+.+...+++++.+ .+ .++||++||...+..
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~--------- 163 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA--------- 163 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC---------
Confidence 39999999996432 24556778999999998888742 33 468999998753211
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-----eccccccccCCCCHHHHHHHHH
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-----~~~~~~~~~~~v~~~Dva~~~~ 265 (301)
......|+.+|.+.+.+.+ .+|++++.|+||.+.+++...... ..........+..++|+|++++
T Consensus 164 ---~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~ 240 (262)
T PRK07831 164 ---QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIA 240 (262)
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 1224568899999887654 368999999999999986432100 0001112234668999999996
Q ss_pred HHhc
Q 022216 266 EALL 269 (301)
Q Consensus 266 ~~l~ 269 (301)
.++.
T Consensus 241 ~l~s 244 (262)
T PRK07831 241 FLAS 244 (262)
T ss_pred HHcC
Confidence 6554
No 222
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.87 E-value=4.4e-21 Score=164.21 Aligned_cols=204 Identities=18% Similarity=0.160 Sum_probs=141.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
|++|||||+|+||+++++.|+++|++|++++|+... ..+.. .....++.++.+|++| .+++.+++.. ++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD-TEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999999988532 11111 1123568899999999 7666665532 49
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|+||||||.... ++++.++++|+.+..++++++ ++.+.++||++||...+.... ..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~------------~~ 149 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF------------GQ 149 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC------------CC
Confidence 999999986432 234567789999999986655 555667999999986553221 13
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec----cccccccCCCCHHHHHHHHHHHhcCCC-
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME----TEDTLYEGTISRDQVAEVAVEALLHPE- 272 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~----~~~~~~~~~v~~~Dva~~~~~~l~~~~- 272 (301)
..|..+|.+.+.+.+ ..++++++++||++.++......... ........+..++|+++++..++..+.
T Consensus 150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 229 (245)
T PRK12824 150 TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAG 229 (245)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 467788887765543 46899999999999987643211000 011112235689999999966664332
Q ss_pred -CCCcEEEeecC
Q 022216 273 -SSYKVVEIISR 283 (301)
Q Consensus 273 -~~~~~~~v~~~ 283 (301)
..++++++.++
T Consensus 230 ~~~G~~~~~~~g 241 (245)
T PRK12824 230 FITGETISINGG 241 (245)
T ss_pred CccCcEEEECCC
Confidence 35677777764
No 223
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3e-21 Score=167.49 Aligned_cols=208 Identities=18% Similarity=0.154 Sum_probs=144.1
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++|++|||||+|+||.+++++|+++|++|++++|+++...+... ....++.++.+|++| .+++.+.+.+
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEF 84 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4568999999999999999999999999999999998766543321 123467889999999 7666665432
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc---CCCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||.... +++...+++|+.++.++++++.+. ..++||++||...+.. ..
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~------------~~ 152 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP------------MP 152 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC------------CC
Confidence 38999999985321 234456789999999999988532 2269999999864321 12
Q ss_pred hhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccC-CCCCCce-----ee-ccccccccCCCCHHHHHHHHHHHh
Q 022216 203 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRN-EPPTGNI-----IM-ETEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~-~~~~~~~-----~~-~~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
.+..|..+|.+.+.+.+ ..|++++.|+||.+.+ +...... .. .........+..++|+|+.++.++
T Consensus 153 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 232 (264)
T PRK07576 153 MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLA 232 (264)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 24678899999887664 2689999999999874 3111100 00 000111234678999999998777
Q ss_pred cCCC--CCCcEEEeecC
Q 022216 269 LHPE--SSYKVVEIISR 283 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~~ 283 (301)
..+. ..++.+.+.++
T Consensus 233 ~~~~~~~~G~~~~~~gg 249 (264)
T PRK07576 233 SDMASYITGVVLPVDGG 249 (264)
T ss_pred ChhhcCccCCEEEECCC
Confidence 6432 34556655553
No 224
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.87 E-value=6.1e-21 Score=199.78 Aligned_cols=231 Identities=22% Similarity=0.296 Sum_probs=165.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCC----CeEEEEEeCCchhhh---cc----------ccCCCCeEEEEccCCCC----
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKG----FAVKAGVRDLDKAKT---TL----------SKDNPSLQIVKADVTEG---- 124 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G----~~V~~~~r~~~~~~~---~~----------~~~~~~~~~~~~Dl~~~---- 124 (301)
.++||||||+||||.++++.|+++| ++|+++.|....... +. .....+++++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5799999999999999999999987 799999997543221 10 00124789999999863
Q ss_pred -hHhHHHHhcCCCCEEEEccCCCCCCC-CCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCC-----------
Q 022216 125 -SAKLSEAIGDDSEAVVCATGFQPGWD-LFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMG----------- 191 (301)
Q Consensus 125 -~~~~~~~~~~~~d~Vi~~Ag~~~~~~-~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~----------- 191 (301)
.+.+.++..+ +|+|||||+...... .......|+.|+.++++++++.++++|+|+||.++|+....
T Consensus 1051 ~~~~~~~l~~~-~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1051 SDEKWSDLTNE-VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred CHHHHHHHHhc-CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence 3455666667 999999998654322 22233579999999999999888899999999999863210
Q ss_pred -CCCCcch--h--hcchhhHHHHHHHHHHHHHHH---cCCcEEEEecCcccCCCCCCcee--------------e--ccc
Q 022216 192 -QILNPAY--I--FLNVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGNII--------------M--ETE 247 (301)
Q Consensus 192 -~~~~~~~--~--~~~~~~~y~~sK~~~e~~~~~---~~i~~~~irpg~v~~~~~~~~~~--------------~--~~~ 247 (301)
....+.. . .......|+.+|+.+|+++.. .|++++++|||.++|+...+... . .+.
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence 0001110 0 112235699999999988753 58999999999999986443210 0 011
Q ss_pred cccccCCCCHHHHHHHHHHHhcCCC--CCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 248 DTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 248 ~~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
......+++++|+|++++.++..+. ..+.+||+.++ ..+++.++++.+.+
T Consensus 1210 ~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~ 1261 (1389)
T TIGR03443 1210 INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH---PRIRFNDFLGTLKT 1261 (1389)
T ss_pred CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC---CCCcHHHHHHHHHH
Confidence 1112468899999999998887653 24568888875 78999999988753
No 225
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=2.6e-21 Score=167.15 Aligned_cols=205 Identities=16% Similarity=0.104 Sum_probs=137.7
Q ss_pred ccCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEeCC-----------chhhh---ccccCCCCeEEEEccCCCChHh
Q 022216 64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDL-----------DKAKT---TLSKDNPSLQIVKADVTEGSAK 127 (301)
Q Consensus 64 ~~~~~vlVtGatG--~iG~~~~~~l~~~G~~V~~~~r~~-----------~~~~~---~~~~~~~~~~~~~~Dl~~~~~~ 127 (301)
+++|++|||||+| +||++++++|+++|++|+++.|.. .+..+ .....+.++.++++|++| .++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~-~~~ 82 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ-NDA 82 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHH
Confidence 5689999999995 999999999999999999875421 11111 111234578899999999 666
Q ss_pred HHHHhcC------CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEeccccccccc
Q 022216 128 LSEAIGD------DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAA 189 (301)
Q Consensus 128 ~~~~~~~------~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~ 189 (301)
+.+++.. ++|+||||||.... ++++..+++|+.+.+.+.+++ ++.+.++||++||...+.
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-- 160 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-- 160 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC--
Confidence 6655532 38999999996432 235567899999988886555 334457999999986321
Q ss_pred CCCCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccc-cccCCCCHHHHH
Q 022216 190 MGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDT-LYEGTISRDQVA 261 (301)
Q Consensus 190 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~-~~~~~v~~~Dva 261 (301)
+...+..|+.+|.+.+.+.+ .+|++++.|+||++.++............. .......++|+|
T Consensus 161 ----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a 230 (256)
T PRK12859 161 ----------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAA 230 (256)
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 11235678899998886643 368999999999999875332211000011 112345799999
Q ss_pred HHHHHHhcCCC--CCCcEEEee
Q 022216 262 EVAVEALLHPE--SSYKVVEII 281 (301)
Q Consensus 262 ~~~~~~l~~~~--~~~~~~~v~ 281 (301)
++++.++.... ..++++.+.
T Consensus 231 ~~~~~l~s~~~~~~~G~~i~~d 252 (256)
T PRK12859 231 RLIKFLASEEAEWITGQIIHSE 252 (256)
T ss_pred HHHHHHhCccccCccCcEEEeC
Confidence 99976654322 234444443
No 226
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.87 E-value=4.2e-21 Score=165.91 Aligned_cols=202 Identities=21% Similarity=0.189 Sum_probs=140.9
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc------CCCCeEEEEccCCCChHhHH------
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK------DNPSLQIVKADVTEGSAKLS------ 129 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~------ 129 (301)
.++.+|++||||++.+||+++|++|++.|++|++.+|+.+.+++.... ...++..+.+|+++ .+.+.
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~ 82 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFA 82 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHH
Confidence 456899999999999999999999999999999999998875543321 24568999999998 43332
Q ss_pred -HH-hcCCCCEEEEccCCCCC---------CCCCCceeeehHH-HHHHHHHHH----HcCCCEEEEecccccccccCCCC
Q 022216 130 -EA-IGDDSEAVVCATGFQPG---------WDLFAPWKVDNFG-TVNLVEACR----KRGVNRFILISSILVNGAAMGQI 193 (301)
Q Consensus 130 -~~-~~~~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g-~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~ 193 (301)
+. ++. +|++|||||.... ++|+..+++|+.| .+.+.+++. +.+.+.|+++||...+......
T Consensus 83 ~~~~~Gk-idiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~- 160 (270)
T KOG0725|consen 83 VEKFFGK-IDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS- 160 (270)
T ss_pred HHHhCCC-CCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC-
Confidence 23 344 9999999996542 3577889999995 677777763 3345789999998643222110
Q ss_pred CCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee--------c--cccc-cccCCC
Q 022216 194 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--------E--TEDT-LYEGTI 255 (301)
Q Consensus 194 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~--------~--~~~~-~~~~~v 255 (301)
...|..+|.+.+++.+ ..|+|++.|.||.+.++........ . .... ......
T Consensus 161 ----------~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g 230 (270)
T KOG0725|consen 161 ----------GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVG 230 (270)
T ss_pred ----------cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCcc
Confidence 1457788888876654 4799999999999999862111110 0 1111 123356
Q ss_pred CHHHHHHHHHHHhcCCCCCCcE
Q 022216 256 SRDQVAEVAVEALLHPESSYKV 277 (301)
Q Consensus 256 ~~~Dva~~~~~~l~~~~~~~~~ 277 (301)
.++|+|..+. +|..+...+.+
T Consensus 231 ~~~eva~~~~-fla~~~asyit 251 (270)
T KOG0725|consen 231 TPEEVAEAAA-FLASDDASYIT 251 (270)
T ss_pred CHHHHHHhHH-hhcCccccccc
Confidence 8999999985 55445433444
No 227
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.4e-21 Score=166.32 Aligned_cols=205 Identities=17% Similarity=0.162 Sum_probs=139.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCC-chhhhc---cccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~-~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
++++|||||+|+||++++++|+++|++|++..++. +...+. ......++.++.+|++| .+++.+++.. +
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD-EADVLRLFEAVDRELGR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCC-HHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999988776443 332222 11123567889999999 6666665542 3
Q ss_pred CCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHHc----C---CCEEEEecccccccccCCCCCCcchh
Q 022216 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR----G---VNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~~----~---~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
+|+||||||.... +++..++++|+.++.++++++.+. . .++||++||...+.....
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------- 152 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-------- 152 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--------
Confidence 9999999996532 133466899999999998887542 1 247999999754321110
Q ss_pred hcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec-----cccccccCCCCHHHHHHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~-----~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
.+..|+.+|.+.+.+.+ .+|+++++|+||+++|++........ ..........+++|++++++.+
T Consensus 153 ---~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l 229 (248)
T PRK06123 153 ---EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWL 229 (248)
T ss_pred ---CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 12358899999887653 24899999999999998643211000 0001111235789999999776
Q ss_pred hcCCC--CCCcEEEeec
Q 022216 268 LLHPE--SSYKVVEIIS 282 (301)
Q Consensus 268 l~~~~--~~~~~~~v~~ 282 (301)
+.... ..++++++.+
T Consensus 230 ~~~~~~~~~g~~~~~~g 246 (248)
T PRK06123 230 LSDEASYTTGTFIDVSG 246 (248)
T ss_pred hCccccCccCCEEeecC
Confidence 65432 3567787765
No 228
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3.4e-21 Score=168.10 Aligned_cols=212 Identities=17% Similarity=0.134 Sum_probs=140.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhc-----CCCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG-----DDSE 137 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 137 (301)
+|+++|||+ |+||++++++|+ +|++|++++|+.+++++... ....++.++.+|++| .+++.+.+. +++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 478999998 799999999996 79999999998766544321 123468889999999 666665553 1499
Q ss_pred EEEEccCCCC-CCCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccC-C---CC---CCcc-----hh---
Q 022216 138 AVVCATGFQP-GWDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAM-G---QI---LNPA-----YI--- 199 (301)
Q Consensus 138 ~Vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~-~---~~---~~~~-----~~--- 199 (301)
+||||||+.. ..++..++++|+.|++++++++.+. ..+++|++||.+...... . .. ..+. .+
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQ 158 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccc
Confidence 9999999754 3467888999999999999998543 125678888876432110 0 00 0000 00
Q ss_pred h---cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec--------cccccccCCCCHHHHH
Q 022216 200 F---LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME--------TEDTLYEGTISRDQVA 261 (301)
Q Consensus 200 ~---~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~--------~~~~~~~~~v~~~Dva 261 (301)
+ ...+..|..+|.+.+.+.+ ..||+++.|.||++.|++....+... ........+..++|+|
T Consensus 159 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia 238 (275)
T PRK06940 159 PDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIA 238 (275)
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHH
Confidence 0 0135679999999876543 36899999999999998643221100 0011123467899999
Q ss_pred HHHHHHhcCCCC---CCcEEEee
Q 022216 262 EVAVEALLHPES---SYKVVEII 281 (301)
Q Consensus 262 ~~~~~~l~~~~~---~~~~~~v~ 281 (301)
++++.++ ++.. .++++.+.
T Consensus 239 ~~~~fL~-s~~~~~itG~~i~vd 260 (275)
T PRK06940 239 ALAEFLM-GPRGSFITGSDFLVD 260 (275)
T ss_pred HHHHHHc-CcccCcccCceEEEc
Confidence 9986554 4433 34444443
No 229
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.87 E-value=3.2e-21 Score=171.55 Aligned_cols=189 Identities=22% Similarity=0.195 Sum_probs=138.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCC-h---HhHHHHhcC-
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEG-S---AKLSEAIGD- 134 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~-~---~~~~~~~~~- 134 (301)
.+++++||||+||||++++++|+++|++|++++|+++++++...+ ....+..+.+|+++. . +.+.+.+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 489999999999999999999999999999999998876654321 124677889999852 2 334445554
Q ss_pred CCCEEEEccCCCCC----------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 DSEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|++|||||.... ++++..+++|+.|+.++++++. +.+.++||++||...+... ..
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~~-------- 202 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP-SD-------- 202 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-CC--------
Confidence 46699999996421 1234578999999999888873 4456799999998653210 00
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcC
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
.....|+.+|.+.+.+.+ ..|++++.|.||++.|++.... . .. + ...+++++|+.++..+..
T Consensus 203 -p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~----~-~~-~-~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 203 -PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR----R-SS-F-LVPSSDGYARAALRWVGY 271 (320)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc----C-CC-C-CCCCHHHHHHHHHHHhCC
Confidence 124678899999886553 3589999999999999875421 1 11 1 136899999999999864
No 230
>PRK08324 short chain dehydrogenase; Validated
Probab=99.87 E-value=4.1e-21 Score=186.95 Aligned_cols=208 Identities=21% Similarity=0.257 Sum_probs=149.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCC--CCeEEEEccCCCChHhHHHHhcC------
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
.+.+|+||||||+|+||+++++.|+++|++|++++|+.+..+....... .++.++.+|++| .+++.+++..
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence 3568999999999999999999999999999999999876554332111 478899999999 7666655531
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcCC-CEEEEecccccccccCCCCCCcchhhc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRGV-NRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
++|+||||||.... ++|...+++|+.|+.++++++. +.+. ++||++||...+...
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~------------ 565 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG------------ 565 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC------------
Confidence 39999999996532 2355678999999999987773 4443 799999998643211
Q ss_pred chhhHHHHHHHHHHHHHHH-------cCCcEEEEecCccc--CCCCCCcee--------e--------ccccccccCCCC
Q 022216 202 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLR--NEPPTGNII--------M--------ETEDTLYEGTIS 256 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~~-------~~i~~~~irpg~v~--~~~~~~~~~--------~--------~~~~~~~~~~v~ 256 (301)
.....|+.+|.+.+.+.+. .|+++++|+|+.++ ++...+... . .........+++
T Consensus 566 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~ 645 (681)
T PRK08324 566 PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVT 645 (681)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccC
Confidence 2246789999999877642 47999999999995 322221110 0 001122235789
Q ss_pred HHHHHHHHHHHhc--CCCCCCcEEEeecC
Q 022216 257 RDQVAEVAVEALL--HPESSYKVVEIISR 283 (301)
Q Consensus 257 ~~Dva~~~~~~l~--~~~~~~~~~~v~~~ 283 (301)
++|+|++++.++. .....+.++++.++
T Consensus 646 ~~DvA~a~~~l~s~~~~~~tG~~i~vdgG 674 (681)
T PRK08324 646 PEDVAEAVVFLASGLLSKTTGAIITVDGG 674 (681)
T ss_pred HHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 9999999987773 34456778888774
No 231
>PRK05855 short chain dehydrogenase; Validated
Probab=99.87 E-value=4e-21 Score=184.35 Aligned_cols=197 Identities=17% Similarity=0.165 Sum_probs=145.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
.++++++|||||+|+||++++++|+++|++|++++|+.++.++... ....++.++.+|++| .+++.+.+..
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEH 390 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhc
Confidence 4567899999999999999999999999999999998766554322 134578899999999 6666555432
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcC-CCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... +++..++++|+.|+.++++++. +.+ .++||++||.+.|...
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------- 459 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS----------- 459 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-----------
Confidence 49999999997532 2455678899999999998863 333 3699999999866432
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecccc-----------c-cccCCCCHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETED-----------T-LYEGTISRDQVA 261 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~-----------~-~~~~~v~~~Dva 261 (301)
.....|+.+|.+.+.+.+ +.||+++.|+||.+.+++........... . .......++|+|
T Consensus 460 -~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va 538 (582)
T PRK05855 460 -RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVA 538 (582)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHH
Confidence 124678899998876543 36899999999999998644321110000 0 011235899999
Q ss_pred HHHHHHhcCCC
Q 022216 262 EVAVEALLHPE 272 (301)
Q Consensus 262 ~~~~~~l~~~~ 272 (301)
+.++.++.++.
T Consensus 539 ~~~~~~~~~~~ 549 (582)
T PRK05855 539 KAIVDAVKRNK 549 (582)
T ss_pred HHHHHHHHcCC
Confidence 99999998764
No 232
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.86 E-value=6.7e-21 Score=162.77 Aligned_cols=198 Identities=15% Similarity=0.171 Sum_probs=138.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc----CCCCeEEEEccCCCC-hHhHH-------H
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEG-SAKLS-------E 130 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~-~~~~~-------~ 130 (301)
.+++|+++||||+|+||+++++.|+++|++|++++|+++..++.... ....+.++.+|+++. .+++. +
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999998765543211 223567888999752 22333 2
Q ss_pred Hh-cCCCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCc
Q 022216 131 AI-GDDSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNP 196 (301)
Q Consensus 131 ~~-~~~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~ 196 (301)
.+ .. +|+||||||.... +++...+++|+.|++++++++.+ .+.+++|++||.... .
T Consensus 83 ~~~~~-id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~---~------ 152 (239)
T PRK08703 83 ATQGK-LDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE---T------ 152 (239)
T ss_pred HhCCC-CCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc---c------
Confidence 33 44 8999999996421 12344689999999999888743 345799999996421 1
Q ss_pred chhhcchhhHHHHHHHHHHHHHHH-------c-CCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHh
Q 022216 197 AYIFLNVFGLTLIAKLQAEQYIRK-------S-GINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 197 ~~~~~~~~~~y~~sK~~~e~~~~~-------~-~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
+......|+.+|.+.+.+.+. . +++++.|+||++.+++..... .. . ....+..++|++..++.++
T Consensus 153 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~--~~-~-~~~~~~~~~~~~~~~~~~~ 225 (239)
T PRK08703 153 ---PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH--PG-E-AKSERKSYGDVLPAFVWWA 225 (239)
T ss_pred ---CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC--CC-C-CccccCCHHHHHHHHHHHh
Confidence 112245788999998876531 2 699999999999998754321 11 1 1224678999999997666
Q ss_pred cCCCCCCcEE
Q 022216 269 LHPESSYKVV 278 (301)
Q Consensus 269 ~~~~~~~~~~ 278 (301)
. +...+.+.
T Consensus 226 ~-~~~~~~~g 234 (239)
T PRK08703 226 S-AESKGRSG 234 (239)
T ss_pred C-ccccCcCC
Confidence 5 43344333
No 233
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.86 E-value=4.2e-21 Score=165.11 Aligned_cols=200 Identities=16% Similarity=0.141 Sum_probs=137.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCC-chhhhccccCCCCeEEEEccCCCChHhHHHHhcC--------CC-
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--------DS- 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------~~- 136 (301)
|++|||||+|+||++++++|+++|++|++++|++ +.+.++......+++++.+|++| .+++.+.++. ..
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQD-VHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCC-HHHHHHHHHHHHHhcCcccCC
Confidence 6899999999999999999999999999999987 33333332234578899999999 7677665543 01
Q ss_pred -CEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHH----Hc-CCCEEEEecccccccccCCCCCCcchhhc
Q 022216 137 -EAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KR-GVNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 137 -d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~----~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
+++|||||.... +++...+++|+.+...+++++. +. +.++||++||...+. +.
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~ 148 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN------------PY 148 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC------------CC
Confidence 278999986422 2345668899999877777663 32 346899999975421 12
Q ss_pred chhhHHHHHHHHHHHHHH---------HcCCcEEEEecCcccCCCCCCceeeccc----------cccccCCCCHHHHHH
Q 022216 202 NVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGNIIMETE----------DTLYEGTISRDQVAE 262 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~---------~~~i~~~~irpg~v~~~~~~~~~~~~~~----------~~~~~~~v~~~Dva~ 262 (301)
.....|+.+|.+.+.+.+ ..+++++.|+||++.+++.......... ......+.+++|+|+
T Consensus 149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 228 (251)
T PRK06924 149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAK 228 (251)
T ss_pred CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHH
Confidence 335789999999987653 2479999999999988753210000000 001124689999999
Q ss_pred HHHHHhcCC-CCCCcEEE
Q 022216 263 VAVEALLHP-ESSYKVVE 279 (301)
Q Consensus 263 ~~~~~l~~~-~~~~~~~~ 279 (301)
.++.++..+ ...++.+.
T Consensus 229 ~~~~l~~~~~~~~G~~~~ 246 (251)
T PRK06924 229 ALRNLLETEDFPNGEVID 246 (251)
T ss_pred HHHHHHhcccCCCCCEee
Confidence 998888762 23344433
No 234
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.86 E-value=2.7e-21 Score=172.51 Aligned_cols=173 Identities=17% Similarity=0.239 Sum_probs=124.7
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
+++|+++||||+||||++++++|+++|++|++++|+.++.++.... ...++.++.+|++| .+++.+.+..
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 3589999999999999999999999999999999987765543321 23468899999999 7766665532
Q ss_pred CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHH----cC--CCEEEEecccccccccC-C---CCCC
Q 022216 135 DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRK----RG--VNRFILISSILVNGAAM-G---QILN 195 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~----~~--~~~iV~~SS~~~~~~~~-~---~~~~ 195 (301)
++|+||||||+... ++++.++++|+.|++++++++.+ .+ .+|||++||...+.... + .+..
T Consensus 83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~ 162 (322)
T PRK07453 83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP 162 (322)
T ss_pred CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence 49999999996321 23566789999999999888743 22 35999999987653210 0 0000
Q ss_pred c-------------------chhhcchhhHHHHHHHHHHHHH----HH----cCCcEEEEecCccc-CCC
Q 022216 196 P-------------------AYIFLNVFGLTLIAKLQAEQYI----RK----SGINYTIIRPGGLR-NEP 237 (301)
Q Consensus 196 ~-------------------~~~~~~~~~~y~~sK~~~e~~~----~~----~~i~~~~irpg~v~-~~~ 237 (301)
. ...+..+...|+.||++.+.+. ++ .|++++.++||+++ ++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~ 232 (322)
T PRK07453 163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPL 232 (322)
T ss_pred cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcc
Confidence 0 0012345678999999875433 22 47999999999996 444
No 235
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.86 E-value=4e-21 Score=164.64 Aligned_cols=204 Identities=15% Similarity=0.150 Sum_probs=137.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~-~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
+++|||||+|+||++++++|+++|++|+++ .|+.++..+... ....++.++++|++| .+++.+++.+ ++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD-ENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC-HHHHHHHHHHHHHhCCCC
Confidence 689999999999999999999999999875 455544333221 123468889999999 7666665542 48
Q ss_pred CEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHHc-------CCCEEEEecccccccccCCCCCCcchhh
Q 022216 137 EAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR-------GVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 137 d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~~-------~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
|+||||||.... +++...+++|+.++.++++++... ..++||++||...+....+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~--------- 151 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG--------- 151 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC---------
Confidence 999999996422 123467899999999888876432 1357999999864422111
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec-----cccccccCCCCHHHHHHHHHHHh
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~-----~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
.+..|+.+|...+.+++ +.++++++|+||.++|+......... ..........+++|+|++++.++
T Consensus 152 --~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~ 229 (247)
T PRK09730 152 --EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLL 229 (247)
T ss_pred --cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhc
Confidence 12357888988876553 35899999999999998643211000 00011112348999999997766
Q ss_pred cCCC--CCCcEEEeec
Q 022216 269 LHPE--SSYKVVEIIS 282 (301)
Q Consensus 269 ~~~~--~~~~~~~v~~ 282 (301)
..+. ..++.+++.+
T Consensus 230 ~~~~~~~~g~~~~~~g 245 (247)
T PRK09730 230 SDKASYVTGSFIDLAG 245 (247)
T ss_pred ChhhcCccCcEEecCC
Confidence 5432 3455565554
No 236
>PRK08017 oxidoreductase; Provisional
Probab=99.86 E-value=9.4e-21 Score=163.36 Aligned_cols=191 Identities=20% Similarity=0.250 Sum_probs=137.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhc-------CCCCEE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DDSEAV 139 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~~d~V 139 (301)
|+|+||||+|+||.++++.|+++|++|+++.|+.++.+.... .++..+.+|++| .+++.+.+. +++|.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~i 78 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS---LGFTGILLDLDD-PESVERAADEVIALTDNRLYGL 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh---CCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEE
Confidence 689999999999999999999999999999998877654432 357889999999 655544332 138999
Q ss_pred EEccCCCCC--------CCCCCceeeehHHHHHH----HHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHH
Q 022216 140 VCATGFQPG--------WDLFAPWKVDNFGTVNL----VEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (301)
Q Consensus 140 i~~Ag~~~~--------~~~~~~~~~N~~g~~~l----~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y 207 (301)
|||||.... ++++..+++|+.|+.++ ++++++.+.+++|++||...+.. ......|
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------~~~~~~Y 146 (256)
T PRK08017 79 FNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS------------TPGRGAY 146 (256)
T ss_pred EECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC------------CCCccHH
Confidence 999986431 13446789999998876 45556667789999999753311 1224678
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeec------cccccccCCCCHHHHHHHHHHHhcCCCC
Q 022216 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALLHPES 273 (301)
Q Consensus 208 ~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l~~~~~ 273 (301)
+.+|...|.+.+ ..++++++++||.+.++......... ........+++++|+++++..++..+..
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 999999986542 46899999999999876433211100 0000112468999999999999877653
No 237
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.86 E-value=7.6e-21 Score=168.11 Aligned_cols=199 Identities=16% Similarity=0.092 Sum_probs=133.0
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc----------hhhhc---cccCCCCeEEEEccCCCChHhHH
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----------KAKTT---LSKDNPSLQIVKADVTEGSAKLS 129 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~----------~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~ 129 (301)
++++|+++||||+++||++++++|++.|++|++++|+.. ..++. .......+.++++|++| .+++.
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~ 83 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQVR 83 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHHH
Confidence 467899999999999999999999999999999999742 22221 11123457889999999 65555
Q ss_pred HHhcC------CCCEEEEcc-CCC------C------CCCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccc
Q 022216 130 EAIGD------DSEAVVCAT-GFQ------P------GWDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVN 186 (301)
Q Consensus 130 ~~~~~------~~d~Vi~~A-g~~------~------~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~ 186 (301)
+++.. ++|++|||| |.. . .++|...+++|+.+.+.+++++. +.+.++||++||....
T Consensus 84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~ 163 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE 163 (305)
T ss_pred HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc
Confidence 44422 399999999 742 1 02344567899999998888873 3334799999996431
Q ss_pred cccCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee-----e-c--cccccc
Q 022216 187 GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----M-E--TEDTLY 251 (301)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~-----~-~--~~~~~~ 251 (301)
-.... ......|..+|.+...+.+ ..||+++.|.||++.+++...... . . ......
T Consensus 164 ~~~~~---------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~ 234 (305)
T PRK08303 164 YNATH---------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHF 234 (305)
T ss_pred ccCcC---------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhcccccc
Confidence 10000 1123468888888876553 368999999999999885321100 0 0 001111
Q ss_pred cCCCCHHHHHHHHHHHhcCC
Q 022216 252 EGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 252 ~~~v~~~Dva~~~~~~l~~~ 271 (301)
..+..++|+|++++.++..+
T Consensus 235 ~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 235 AISETPRYVGRAVAALAADP 254 (305)
T ss_pred ccCCCHHHHHHHHHHHHcCc
Confidence 22347999999997666544
No 238
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=8e-21 Score=163.09 Aligned_cols=190 Identities=17% Similarity=0.198 Sum_probs=136.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc----cCCCCeEEEEccCCCC-hHh-------HHH
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEG-SAK-------LSE 130 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~~~-~~~-------~~~ 130 (301)
.+++|+||||||+|+||.+++++|+++|++|++++|+.++.+++.. ....++.++.+|+++. .++ +.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 4468999999999999999999999999999999998766544321 1234677888888631 333 333
Q ss_pred HhcCCCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcc
Q 022216 131 AIGDDSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 131 ~~~~~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
.+.. +|+||||||.... ++++..+++|+.++.++++++. +.+.++||++||...+...
T Consensus 89 ~~~~-id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-------- 159 (247)
T PRK08945 89 QFGR-LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR-------- 159 (247)
T ss_pred HhCC-CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC--------
Confidence 3445 9999999986422 2345678899999999888873 4567899999997643211
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhc
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
.....|+.+|.+.+.+++ ..+++++.++||.+.+++....+. . .....+..++|+++.++.++.
T Consensus 160 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~ 230 (247)
T PRK08945 160 ----ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP--G--EDPQKLKTPEDIMPLYLYLMG 230 (247)
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcC--c--ccccCCCCHHHHHHHHHHHhC
Confidence 123468899998887654 247999999999998875332211 1 112346789999999987664
No 239
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.86 E-value=7.2e-21 Score=164.52 Aligned_cols=206 Identities=17% Similarity=0.175 Sum_probs=145.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEeCCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~-V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
+++|+++||||+|+||++++++|+++|++ |++++|+.++..... ......+.++.+|++| .+++.+.+..
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 46899999999999999999999999998 999999876544221 1134567889999999 6666665432
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
++|+||||||.... +++..++++|+.++.++++++.+ .+ .+++|++||...++..
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------- 151 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ----------- 151 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----------
Confidence 39999999996432 22345689999999999988743 22 3689999998765422
Q ss_pred cchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCC---ceee-------c-cccccccCCCCHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG---NIIM-------E-TEDTLYEGTISRDQVAE 262 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~---~~~~-------~-~~~~~~~~~v~~~Dva~ 262 (301)
.....|+.+|...|.+.+ ..+++++.|+||++.+++... .+.. . .....+..+++++|+|+
T Consensus 152 -~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 230 (260)
T PRK06198 152 -PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVAR 230 (260)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHH
Confidence 124678899999887654 257999999999999886321 1000 0 00112234679999999
Q ss_pred HHHHHhcCCC--CCCcEEEeec
Q 022216 263 VAVEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 263 ~~~~~l~~~~--~~~~~~~v~~ 282 (301)
+++.++..+. ..++++.+.+
T Consensus 231 ~~~~l~~~~~~~~~G~~~~~~~ 252 (260)
T PRK06198 231 AVAFLLSDESGLMTGSVIDFDQ 252 (260)
T ss_pred HHHHHcChhhCCccCceEeECC
Confidence 9987765432 2455555554
No 240
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.86 E-value=2.3e-21 Score=157.07 Aligned_cols=215 Identities=20% Similarity=0.207 Sum_probs=149.9
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc----cCCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++||++++||+.||||++++++|+++|..+.++..+.+..+.... .+...+.|+++|+++ ..+++++|+.
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~-~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTN-RGDLEAAFDKILAT 80 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEecccc-HHHHHHHHHHHHHH
Confidence 4579999999999999999999999999988888777666443221 145788999999999 7666666643
Q ss_pred --CCCEEEEccCCCCCCCCCCceeeehHHHHHHHH----HHH-HcC--CCEEEEecccccccccCCCCCCcchhhcchhh
Q 022216 135 --DSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVE----ACR-KRG--VNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 135 --~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~----a~~-~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
.+|++||+||+..+.+|+.++.+|+.|..+-.. .+. +.| .+-||++||... ..+-|..+-|.+++..
T Consensus 81 fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G---L~P~p~~pVY~AsKaG- 156 (261)
T KOG4169|consen 81 FGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG---LDPMPVFPVYAASKAG- 156 (261)
T ss_pred hCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc---cCccccchhhhhcccc-
Confidence 499999999999999999999999998665444 443 332 368999999862 2222333444433321
Q ss_pred HHHHHHH-HHHHHHHHcCCcEEEEecCcccCCCCCCc----eeeccccc-----cccCCCCHHHHHHHHHHHhcCCCCCC
Q 022216 206 LTLIAKL-QAEQYIRKSGINYTIIRPGGLRNEPPTGN----IIMETEDT-----LYEGTISRDQVAEVAVEALLHPESSY 275 (301)
Q Consensus 206 ~y~~sK~-~~e~~~~~~~i~~~~irpg~v~~~~~~~~----~~~~~~~~-----~~~~~v~~~Dva~~~~~~l~~~~~~~ 275 (301)
.-+.++. +-+.+.++.|++++.+.||.+.+.....- ..+..++. ...+..++.++|.-++.+++.+. .+
T Consensus 157 VvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~-NG 235 (261)
T KOG4169|consen 157 VVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPK-NG 235 (261)
T ss_pred eeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhcc-CC
Confidence 1122222 23456677899999999999887642211 11111110 11245788999999999999865 57
Q ss_pred cEEEeecC
Q 022216 276 KVVEIISR 283 (301)
Q Consensus 276 ~~~~v~~~ 283 (301)
.+|-+..+
T Consensus 236 aiw~v~~g 243 (261)
T KOG4169|consen 236 AIWKVDSG 243 (261)
T ss_pred cEEEEecC
Confidence 77777664
No 241
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.86 E-value=6.2e-21 Score=163.75 Aligned_cols=204 Identities=18% Similarity=0.169 Sum_probs=135.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEe-CCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r-~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+|+||||||+|+||+++++.|+++|++|+++.+ +++..+... .....++.++.+|++| .+++.+++.. +
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN-EADVIAMFDAVQSAFGR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC-HHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999987654 444333221 1134578999999999 6666554431 3
Q ss_pred CCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHHc----C---CCEEEEecccccccccCCCCCCcchh
Q 022216 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKR----G---VNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~~----~---~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
+|+||||||.... +++..++++|+.++.++++++.+. + .++||++||...+... +
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~---~------ 151 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS---P------ 151 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC---C------
Confidence 9999999996432 123456889999999988665321 1 2479999997643111 1
Q ss_pred hcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCc--eee---ccccccccCCCCHHHHHHHHHHH
Q 022216 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN--IIM---ETEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~--~~~---~~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
..+..|+.+|.+.+.+.+ ..|+++++|+||++.+++.... ... ...........+++|+|+.++.+
T Consensus 152 --~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l 229 (248)
T PRK06947 152 --NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWL 229 (248)
T ss_pred --CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 012458889988876543 3589999999999999864321 000 00011112246899999999877
Q ss_pred hcCCC--CCCcEEEee
Q 022216 268 LLHPE--SSYKVVEII 281 (301)
Q Consensus 268 l~~~~--~~~~~~~v~ 281 (301)
+.++. ..++.+.+.
T Consensus 230 ~~~~~~~~~G~~~~~~ 245 (248)
T PRK06947 230 LSDAASYVTGALLDVG 245 (248)
T ss_pred cCccccCcCCceEeeC
Confidence 76543 345555443
No 242
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.86 E-value=9.9e-21 Score=184.40 Aligned_cols=191 Identities=21% Similarity=0.264 Sum_probs=144.8
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
.+++|+++||||+|+||++++++|+++|++|++++|+++.+++... ....++.++.+|++| .+++.+++..
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEH 446 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999999998876554432 124578899999999 7666665542
Q ss_pred -CCCEEEEccCCCCC----------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchh
Q 022216 135 -DSEAVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYI 199 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~ 199 (301)
++|+||||||.... +++...+++|+.|+.++++++ ++.+.++||++||.+.+...
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 516 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA---------- 516 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC----------
Confidence 39999999996421 134456789999998887776 44566899999999766422
Q ss_pred hcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 200 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 200 ~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.....|+.+|.+.+.+.+ ..|+++++|+||++.|++....... .....++++++|+.++..+...
T Consensus 517 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~-----~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 517 --PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY-----NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc-----cCCCCCCHHHHHHHHHHHHHhC
Confidence 124568899998887653 3689999999999999875432111 1123578999999999887654
No 243
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.2e-20 Score=164.38 Aligned_cols=192 Identities=16% Similarity=0.191 Sum_probs=133.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc----CCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
|+++||||+|+||.++++.|+++|++|++++|+.+..++...+ ......++.+|++| .+++.+.+.. ++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 5799999999999999999999999999999987655443211 12234567899999 6655544332 38
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----Hc-CCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KR-GVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
|+||||||.... ++++..+++|+.++.++++++. +. ..++||++||...+. +.+ .
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~---~~~---------~ 147 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV---ALP---------W 147 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC---CCC---------C
Confidence 999999986432 2345678999999999999974 22 246999999975321 111 1
Q ss_pred hhHHHHHHHHHHHHH-------HHcCCcEEEEecCcccCCCCCCceeec---cc-------cccccCCCCHHHHHHHHHH
Q 022216 204 FGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIME---TE-------DTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~-------~~~~i~~~~irpg~v~~~~~~~~~~~~---~~-------~~~~~~~v~~~Dva~~~~~ 266 (301)
...|+.+|.+.+.+. ..+++++++|+||.+.++......... .. .......++++|+|+.++.
T Consensus 148 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~ 227 (272)
T PRK07832 148 HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILA 227 (272)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHH
Confidence 345777887666443 247899999999999988643210000 00 0112235899999999999
Q ss_pred HhcCC
Q 022216 267 ALLHP 271 (301)
Q Consensus 267 ~l~~~ 271 (301)
++.++
T Consensus 228 ~~~~~ 232 (272)
T PRK07832 228 GVEKN 232 (272)
T ss_pred HHhcC
Confidence 98654
No 244
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.86 E-value=1e-20 Score=166.34 Aligned_cols=207 Identities=15% Similarity=0.127 Sum_probs=135.9
Q ss_pred hcccCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc------------C----CCCeEEEEccC--
Q 022216 62 VSVKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK------------D----NPSLQIVKADV-- 121 (301)
Q Consensus 62 ~~~~~~~vlVtGa--tG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~------------~----~~~~~~~~~Dl-- 121 (301)
+++++|++||||| ++|||++++++|+++|++|++ .|+.+.++++... . ......+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4578999999999 899999999999999999998 7766554433211 0 01146788898
Q ss_pred CCCh-----------------HhHHHH-------hcCCCCEEEEccCCCC----------CCCCCCceeeehHHHHHHHH
Q 022216 122 TEGS-----------------AKLSEA-------IGDDSEAVVCATGFQP----------GWDLFAPWKVDNFGTVNLVE 167 (301)
Q Consensus 122 ~~~~-----------------~~~~~~-------~~~~~d~Vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~ 167 (301)
+++. +++.++ ++. +|+||||||... .++|+.++++|+.+.+.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~-iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~ 162 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGS-IDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ 162 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCC-CCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 3311 133333 344 999999997421 13577789999999999999
Q ss_pred HHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------H-cCCcEEEEecCcccCCC
Q 022216 168 ACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEP 237 (301)
Q Consensus 168 a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~i~~~~irpg~v~~~~ 237 (301)
++... ..++||++||..... .. +. ....|..+|.+.+.+.+ . +||+++.|.||++.+++
T Consensus 163 ~~~p~m~~~G~II~isS~a~~~---~~---p~-----~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~ 231 (303)
T PLN02730 163 HFGPIMNPGGASISLTYIASER---II---PG-----YGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA 231 (303)
T ss_pred HHHHHHhcCCEEEEEechhhcC---CC---CC-----CchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence 87432 127999999986321 11 11 12468899998886553 2 58999999999999987
Q ss_pred CCCceeec------cccccccCCCCHHHHHHHHHHHhcCCC--CCCcEEEee
Q 022216 238 PTGNIIME------TEDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEII 281 (301)
Q Consensus 238 ~~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~~v~ 281 (301)
........ ........+..++|+|.+++.++.... ..++++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vd 283 (303)
T PLN02730 232 AKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVD 283 (303)
T ss_pred hhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence 54310000 011111335689999999966554222 234445443
No 245
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2e-20 Score=160.38 Aligned_cols=182 Identities=16% Similarity=0.159 Sum_probs=130.7
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
..+++|+++||||+|+||++++++|+++|++|++++|+.....+.. .......+.+|++| .+++.+.+++ +|++||
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~--~~~~~~~~~~D~~~-~~~~~~~~~~-iDilVn 85 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN--DESPNEWIKWECGK-EESLDKQLAS-LDVLIL 85 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh--ccCCCeEEEeeCCC-HHHHHHhcCC-CCEEEE
Confidence 3567899999999999999999999999999999998863221111 11123678899999 8888888888 999999
Q ss_pred ccCCCC-----CCCCCCceeeehHHHHHHHHHHHHc-------CCCEEEEecccccccccCCCCCCcchhhcchhhHHHH
Q 022216 142 ATGFQP-----GWDLFAPWKVDNFGTVNLVEACRKR-------GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (301)
Q Consensus 142 ~Ag~~~-----~~~~~~~~~~N~~g~~~l~~a~~~~-------~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~ 209 (301)
|||... .++++..+++|+.|+.++++++.+. +.+.++..||.+... . + ....|..
T Consensus 86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~---~-~---------~~~~Y~a 152 (245)
T PRK12367 86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ---P-A---------LSPSYEI 152 (245)
T ss_pred CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC---C-C---------CCchhHH
Confidence 999643 2356678899999999999987431 122344444433111 0 0 1245888
Q ss_pred HHHHHHHHH----------HHcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 210 AKLQAEQYI----------RKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 210 sK~~~e~~~----------~~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
+|.+.+.+. ...++.++.+.||.+.+++.. ...++++|+|+.++.++..+.
T Consensus 153 SKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 153 SKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP------------IGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc------------cCCCCHHHHHHHHHHHHhcCC
Confidence 888864221 136899999999998776421 125789999999999987654
No 246
>PRK07069 short chain dehydrogenase; Validated
Probab=99.85 E-value=1.6e-20 Score=161.37 Aligned_cols=190 Identities=14% Similarity=0.091 Sum_probs=130.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCCeEEEEEeC-Cchhhhcccc----C-CCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSK----D-NPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~-~~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+++||||+|+||+++++.|+++|++|++++|+ .+.+++.... . ...+..+.+|++| .+++.+++.. +
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD-EAQWQALLAQAADAMGG 79 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 38999999999999999999999999999998 4444332211 1 1234568899999 6666554432 3
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehH----HHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNF----GTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~----g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
+|+||||||.... +++..++++|+. ++..+++++++.+.++||++||...+.... .
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~------------~ 147 (251)
T PRK07069 80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP------------D 147 (251)
T ss_pred ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC------------C
Confidence 9999999996532 134556788998 556666667766778999999987654321 1
Q ss_pred hhHHHHHHHHHHHHHHH---------cCCcEEEEecCcccCCCCCCceee-cc--------ccccccCCCCHHHHHHHHH
Q 022216 204 FGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNIIM-ET--------EDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~~---------~~i~~~~irpg~v~~~~~~~~~~~-~~--------~~~~~~~~v~~~Dva~~~~ 265 (301)
+..|+.+|.+.+.+.+. .+++++.|+||++.+++....... .. .......+.+++|+|++++
T Consensus 148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 227 (251)
T PRK07069 148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVL 227 (251)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHH
Confidence 34577888877765531 258999999999999865321100 00 0111123568999999997
Q ss_pred HHhcC
Q 022216 266 EALLH 270 (301)
Q Consensus 266 ~~l~~ 270 (301)
.++..
T Consensus 228 ~l~~~ 232 (251)
T PRK07069 228 YLASD 232 (251)
T ss_pred HHcCc
Confidence 75543
No 247
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.4e-20 Score=156.33 Aligned_cols=180 Identities=22% Similarity=0.230 Sum_probs=132.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC--CCCEEEEccC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCATG 144 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vi~~Ag 144 (301)
|+++||||+|+||++++++|+++ ++|++++|+.. .+++|++| .+++.+.+.. ++|+||||||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~-~~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITD-PASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCC-hHHHHHHHHhcCCCCEEEECCC
Confidence 47999999999999999999999 99999888643 36799999 7777776653 4999999999
Q ss_pred CCCC--------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHH
Q 022216 145 FQPG--------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 214 (301)
Q Consensus 145 ~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 214 (301)
.... ++|...+++|+.++.++++++.+. +.++|+++||..... +. .....|..+|.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~---~~---------~~~~~Y~~sK~a~ 132 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE---PI---------PGGASAATVNGAL 132 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC---CC---------CCchHHHHHHHHH
Confidence 6431 245566789999999999998542 336899999875321 11 1245678888887
Q ss_pred HHHHH------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEe
Q 022216 215 EQYIR------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEI 280 (301)
Q Consensus 215 e~~~~------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v 280 (301)
+.+.+ ..|++++.|+||++.+++....-.. ....+++++|+|+.++.++... ..++++++
T Consensus 133 ~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~a~~~~~~~~~~-~~g~~~~~ 198 (199)
T PRK07578 133 EGFVKAAALELPRGIRINVVSPTVLTESLEKYGPFF-----PGFEPVPAARVALAYVRSVEGA-QTGEVYKV 198 (199)
T ss_pred HHHHHHHHHHccCCeEEEEEcCCcccCchhhhhhcC-----CCCCCCCHHHHHHHHHHHhccc-eeeEEecc
Confidence 76543 3589999999999988753211001 1124689999999998888754 35566654
No 248
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.85 E-value=3.5e-20 Score=154.83 Aligned_cols=214 Identities=15% Similarity=0.102 Sum_probs=148.5
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhc-CCCCEEEEccCCCC
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-DDSEAVVCATGFQP 147 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~~d~Vi~~Ag~~~ 147 (301)
|+||||||+||++++.+|.+.|++|+++.|++.+..+... ..+. . -+.+.+... + +|+|||.||..-
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~---~~v~-------~-~~~~~~~~~~~-~DavINLAG~~I 68 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH---PNVT-------L-WEGLADALTLG-IDAVINLAGEPI 68 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC---cccc-------c-cchhhhcccCC-CCEEEECCCCcc
Confidence 6899999999999999999999999999999887554331 1221 1 122333333 5 999999999643
Q ss_pred CCC-CCC-----ceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHH-
Q 022216 148 GWD-LFA-----PWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI- 218 (301)
Q Consensus 148 ~~~-~~~-----~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~- 218 (301)
.+. |.. ..+.-+..|..|.++..+. +.+.+|.-|.+..||........++.++.+.+.. .--...|+..
T Consensus 69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla--~lc~~WE~~a~ 146 (297)
T COG1090 69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLA--QLCQDWEEEAL 146 (297)
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHH--HHHHHHHHHHh
Confidence 322 322 2345567788999988744 4567888888888998876665555433332221 1222223333
Q ss_pred --HHcCCcEEEEecCcccCCCCCC--ce------e---eccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCC
Q 022216 219 --RKSGINYTIIRPGGLRNEPPTG--NI------I---METEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVD 285 (301)
Q Consensus 219 --~~~~i~~~~irpg~v~~~~~~~--~~------~---~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~ 285 (301)
++.|.|++++|.|.|.++...- .+ . .-+....|.+|||+||+.+++..++++... ...||+..+
T Consensus 147 ~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~l-sGp~N~taP-- 223 (297)
T COG1090 147 QAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQL-SGPFNLTAP-- 223 (297)
T ss_pred hhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCC-CCcccccCC--
Confidence 3468999999999999864221 10 0 123355667899999999999888887764 448999995
Q ss_pred CCCcCHHHHHHHhhc
Q 022216 286 APKRSYEDLFGSIKQ 300 (301)
Q Consensus 286 ~~~~s~~e~~~~i~~ 300 (301)
.+++.+|+.+.+++
T Consensus 224 -~PV~~~~F~~al~r 237 (297)
T COG1090 224 -NPVRNKEFAHALGR 237 (297)
T ss_pred -CcCcHHHHHHHHHH
Confidence 99999999998875
No 249
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.85 E-value=1.8e-20 Score=161.37 Aligned_cols=192 Identities=20% Similarity=0.200 Sum_probs=135.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
|+++||||+|+||.+++++|++.|++|+++.|+.+..++... ....++.++.+|++| ++++.+++.. ++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999999999998655443321 134568899999999 7766665432 389
Q ss_pred EEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcC-CCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 138 ~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
+||||||.... ++++..+++|+.++..+++++. +.+ .++||++||....... ..+
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~ 147 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN------------PIL 147 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC------------CCC
Confidence 99999996432 2345678999999988877764 323 3689999997532211 124
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee---------cc------ccccccCCCCHHHHHH
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---------ET------EDTLYEGTISRDQVAE 262 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~---------~~------~~~~~~~~v~~~Dva~ 262 (301)
+.|..+|.+.+.+.+ ..++++++|+||.+.+++....... .. .......+.+++|+++
T Consensus 148 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 227 (254)
T TIGR02415 148 SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAG 227 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHH
Confidence 678889998887654 2489999999999988753221100 00 0011123678999999
Q ss_pred HHHHHhcCC
Q 022216 263 VAVEALLHP 271 (301)
Q Consensus 263 ~~~~~l~~~ 271 (301)
++..++..+
T Consensus 228 ~~~~l~~~~ 236 (254)
T TIGR02415 228 LVSFLASED 236 (254)
T ss_pred HHHhhcccc
Confidence 986666544
No 250
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=4.4e-20 Score=157.46 Aligned_cols=205 Identities=17% Similarity=0.093 Sum_probs=141.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+++++||||||+|+||+++++.|+++|++|++++|++++.+..... ...++.++++|++| .+++.+.+.+ +
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999988765543211 12368899999999 6666554432 3
Q ss_pred CCEEEEccCCCCC------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHH
Q 022216 136 SEAVVCATGFQPG------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y 207 (301)
+|.+||++|.... +++..++++|+.+..++++.+.+. ..+++|++||...... . ......|
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~--~---------~~~~~~Y 150 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK--A---------SPDQLSY 150 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc--C---------CCCchHH
Confidence 8999999985332 123455789999988888887543 2368999999753110 0 1123568
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC--CCCcEE
Q 022216 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE--SSYKVV 278 (301)
Q Consensus 208 ~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~ 278 (301)
..+|.+.+.+++ ..++++++|+||+++++...... ...........++++|++++++.++..+. ..++.+
T Consensus 151 ~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~ 229 (238)
T PRK05786 151 AVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN-WKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVI 229 (238)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh-hhhhccccCCCCCHHHHHHHHHHHhcccccCccCCEE
Confidence 889988875442 35899999999999997532211 00001111235789999999988886533 245555
Q ss_pred Eee
Q 022216 279 EII 281 (301)
Q Consensus 279 ~v~ 281 (301)
.+.
T Consensus 230 ~~~ 232 (238)
T PRK05786 230 PVD 232 (238)
T ss_pred EEC
Confidence 553
No 251
>PRK06484 short chain dehydrogenase; Validated
Probab=99.85 E-value=1.1e-20 Score=179.26 Aligned_cols=193 Identities=15% Similarity=0.157 Sum_probs=139.5
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
++|++|||||+++||++++++|+++|++|++++|+.+.+++...+...++.++.+|++| .+++.+++.. ++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCCE
Confidence 57999999999999999999999999999999999887766554344577889999999 6655554422 3999
Q ss_pred EEEccCCCC----------CCCCCCceeeehHHHHHHHHHHHH----cCCC-EEEEecccccccccCCCCCCcchhhcch
Q 022216 139 VVCATGFQP----------GWDLFAPWKVDNFGTVNLVEACRK----RGVN-RFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 139 Vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~-~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
||||||+.. .++|+.++++|+.+++.+++++.+ .+.+ +||++||....... ..
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~------------~~ 150 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL------------PK 150 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC------------CC
Confidence 999999631 124567889999999999988843 2333 99999998643211 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc-------ccccccCCCCHHHHHHHHHHHhc
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~-------~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
...|..+|.+.+.+.+ ..+++++.|+||.+.+++......... .......+..++|+|+++..++.
T Consensus 151 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~ 230 (520)
T PRK06484 151 RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLAS 230 (520)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 3568889998886553 358999999999999886432110000 00011234689999999866554
Q ss_pred C
Q 022216 270 H 270 (301)
Q Consensus 270 ~ 270 (301)
.
T Consensus 231 ~ 231 (520)
T PRK06484 231 D 231 (520)
T ss_pred c
Confidence 3
No 252
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.85 E-value=3.6e-20 Score=157.91 Aligned_cols=201 Identities=17% Similarity=0.127 Sum_probs=139.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCC-chhhhc---cccCCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~-~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
+||||++|+||++++++|+++|++|++++|+. +..... ......++.++.+|++| .+++.+.+.+ ++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSD-REDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCCE
Confidence 58999999999999999999999999998875 222221 11133468899999999 7666665532 3899
Q ss_pred EEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 139 Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
|||+||.... ++++..+++|+.++.++++++.+ .+.++||++||...+... .....
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------------~~~~~ 147 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------------AGQAN 147 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------------CCCch
Confidence 9999996532 23456788999999999998854 345799999997533211 11356
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee----ccccccccCCCCHHHHHHHHHHHhcCC--CC
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ETEDTLYEGTISRDQVAEVAVEALLHP--ES 273 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~----~~~~~~~~~~v~~~Dva~~~~~~l~~~--~~ 273 (301)
|+.+|.+.+.+.+ ..|+++++++||.+.++........ .........+.+++|+|++++.++..+ ..
T Consensus 148 y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 227 (239)
T TIGR01830 148 YAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYI 227 (239)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCc
Confidence 7888887765542 3689999999999887643221000 000111234678999999998777543 24
Q ss_pred CCcEEEeec
Q 022216 274 SYKVVEIIS 282 (301)
Q Consensus 274 ~~~~~~v~~ 282 (301)
.++.|++.+
T Consensus 228 ~g~~~~~~~ 236 (239)
T TIGR01830 228 TGQVIHVDG 236 (239)
T ss_pred CCCEEEeCC
Confidence 677888765
No 253
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.85 E-value=3.1e-20 Score=158.66 Aligned_cols=204 Identities=18% Similarity=0.179 Sum_probs=136.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEe-CCchhhhccc---cCCCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r-~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
|++|||||+|+||++++++|+++|++|+++.| +....++... ....++.++.+|++| .+++.+.+.+ ++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999888 3333322211 123578899999999 6655554431 39
Q ss_pred CEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 137 EAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 137 d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
|+||||||.... ++++..+++|+.++..+++++ ++.+.++||++||..... +. ..+
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---~~---------~~~ 147 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK---GQ---------FGQ 147 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC---CC---------CCc
Confidence 999999986432 234556789999988866665 455668999999975321 11 123
Q ss_pred hHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCcee----eccccccccCCCCHHHHHHHHHHHhcCCC-
Q 022216 205 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----METEDTLYEGTISRDQVAEVAVEALLHPE- 272 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~----~~~~~~~~~~~v~~~Dva~~~~~~l~~~~- 272 (301)
..|..+|.+.+.+.+ ..+++++.++||++.++....... ..........+..++|+++++..++.++.
T Consensus 148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~ 227 (242)
T TIGR01829 148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAG 227 (242)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 557788886665442 358999999999999886432110 00001112245688999999865554332
Q ss_pred -CCCcEEEeecC
Q 022216 273 -SSYKVVEIISR 283 (301)
Q Consensus 273 -~~~~~~~v~~~ 283 (301)
..++++.+.++
T Consensus 228 ~~~G~~~~~~gg 239 (242)
T TIGR01829 228 YITGATLSINGG 239 (242)
T ss_pred CccCCEEEecCC
Confidence 34566666553
No 254
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.85 E-value=2.8e-20 Score=180.33 Aligned_cols=208 Identities=18% Similarity=0.226 Sum_probs=143.4
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC---
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD--- 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~--- 134 (301)
.+++|++|||||+|+||++++++|+++|++|++++|+.+..+..... ....+..+.+|++| .+++.+++..
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~ 489 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVAL 489 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999987665443211 12357789999999 7777666542
Q ss_pred ---CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHH----HHcC-CCEEEEecccccccccCCCCCCcch
Q 022216 135 ---DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC----RKRG-VNRFILISSILVNGAAMGQILNPAY 198 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~----~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~ 198 (301)
++|+||||||.... ++|...+++|+.+.+.+++++ ++.+ .++||++||...+...
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~--------- 560 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG--------- 560 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC---------
Confidence 39999999996432 234566789999988877655 3333 3589999997533211
Q ss_pred hhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCC-C-CCcee--------ec--------cccccccC
Q 022216 199 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP-P-TGNII--------ME--------TEDTLYEG 253 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~-~-~~~~~--------~~--------~~~~~~~~ 253 (301)
.....|+.+|.+.+.+.+ ..|++++.|+||.+.++. . .+... .. ........
T Consensus 561 ---~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r 637 (676)
T TIGR02632 561 ---KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKR 637 (676)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCC
Confidence 124689999999987664 258999999999987421 1 11000 00 00112234
Q ss_pred CCCHHHHHHHHHHHhcCCC--CCCcEEEeecC
Q 022216 254 TISRDQVAEVAVEALLHPE--SSYKVVEIISR 283 (301)
Q Consensus 254 ~v~~~Dva~~~~~~l~~~~--~~~~~~~v~~~ 283 (301)
+++++|+|++++.++.... ..+.++++.++
T Consensus 638 ~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG 669 (676)
T TIGR02632 638 HIFPADIAEAVFFLASSKSEKTTGCIITVDGG 669 (676)
T ss_pred CcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence 5889999999976665332 33566666553
No 255
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.84 E-value=2.2e-20 Score=159.53 Aligned_cols=189 Identities=19% Similarity=0.144 Sum_probs=130.2
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc-hhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~-~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
||||||+|+||.++++.|+++|++|+++.|+.. ..++.. .....++.++.+|++| .+++.+.+.. ++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVAD-RVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 689999999999999999999999998887643 222221 1134578999999999 7666655432 4899
Q ss_pred EEEccCCCCC--------CCCCCceeeehHHHHHHHHHH-----HHcCCCEEEEecccccccccCCCCCCcchhhcchhh
Q 022216 139 VVCATGFQPG--------WDLFAPWKVDNFGTVNLVEAC-----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 139 Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~-----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
+|||||.... +++..++++|+.+++++++++ ++.+.++||++||...+... + ...
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~---------~~~ 147 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN---R---------GQV 147 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC---C---------CCc
Confidence 9999996432 245667899999999998876 22345799999997643211 1 124
Q ss_pred HHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeecc---ccccccCCCCHHHHHHHHHHHhcC
Q 022216 206 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET---EDTLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 206 ~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~---~~~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
.|..+|.+.+.+.+ ..|++++.|+||.+.|++......... .......+..++|+|++++.++..
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 222 (239)
T TIGR01831 148 NYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSD 222 (239)
T ss_pred chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 56677776654332 368999999999999987543211000 001112356899999999765553
No 256
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.84 E-value=6.9e-20 Score=154.82 Aligned_cols=181 Identities=19% Similarity=0.216 Sum_probs=136.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHh---cC-CCCEEEE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI---GD-DSEAVVC 141 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~-~~d~Vi~ 141 (301)
+++++||||+|+||++++++|+++|++|++++|+.+..+++.. .++.++.+|++| .+.+.+.+ .+ ++|+|||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA---LGAEALALDVAD-PASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh---ccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEE
Confidence 3689999999999999999999999999999998776655432 356789999999 66666643 22 5999999
Q ss_pred ccCCCC----------CCCCCCceeeehHHHHHHHHHHHH---cCCCEEEEeccccc-ccccCCCCCCcchhhcchhhHH
Q 022216 142 ATGFQP----------GWDLFAPWKVDNFGTVNLVEACRK---RGVNRFILISSILV-NGAAMGQILNPAYIFLNVFGLT 207 (301)
Q Consensus 142 ~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iV~~SS~~~-~~~~~~~~~~~~~~~~~~~~~y 207 (301)
|+|... .++++..+++|+.+++++++++.+ ...+++|++||... ++.... .+...|
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------~~~~~Y 146 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG----------TTGWLY 146 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC----------CCcccc
Confidence 999742 123566889999999999999864 22358999998653 321110 111358
Q ss_pred HHHHHHHHHHHHH-----cCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 208 LIAKLQAEQYIRK-----SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 208 ~~sK~~~e~~~~~-----~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
..+|...+.+++. .+++++.|+||++.+++... .+.+..++.+..+..++...
T Consensus 147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 147 RASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA-----------QAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC-----------CCCCCHHHHHHHHHHHHHhc
Confidence 8999999877653 47899999999999986432 13578899999988877654
No 257
>PRK05599 hypothetical protein; Provisional
Probab=99.84 E-value=3.7e-20 Score=159.00 Aligned_cols=185 Identities=19% Similarity=0.176 Sum_probs=130.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc---C-CCCeEEEEccCCCChHhHHHHhcC------CC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---D-NPSLQIVKADVTEGSAKLSEAIGD------DS 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~---~-~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 136 (301)
|+++||||+++||++++++|+ +|++|++++|+.+++++...+ . ...+.++.+|++| .+++.+++.. ++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD-LDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC-HHHHHHHHHHHHHhcCCC
Confidence 679999999999999999999 599999999998776654321 1 2347889999999 6555544321 49
Q ss_pred CEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHH----HHcC-CCEEEEecccccccccCCCCCCcchhhcch
Q 022216 137 EAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEAC----RKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 137 d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~----~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
|++|||||..... ++...+++|+.+..++++++ ++.+ .++||++||...+- +. ..
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---~~---------~~ 146 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR---AR---------RA 146 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc---CC---------cC
Confidence 9999999975321 12234567888887766554 3333 36999999986321 11 12
Q ss_pred hhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 204 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
...|..+|.+.+.+.+ ..|++++.|.||.+.+++..+.. . . .....++|+|+.++..+.++.
T Consensus 147 ~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~---~--~--~~~~~pe~~a~~~~~~~~~~~ 215 (246)
T PRK05599 147 NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK---P--A--PMSVYPRDVAAAVVSAITSSK 215 (246)
T ss_pred CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC---C--C--CCCCCHHHHHHHHHHHHhcCC
Confidence 3567888888765543 36899999999999998643221 0 0 113589999999999888764
No 258
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.84 E-value=2.4e-20 Score=162.01 Aligned_cols=202 Identities=17% Similarity=0.125 Sum_probs=133.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeC-Cchhhhcccc----CCCCeEEEEccCCCChHhH----HHH------
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSK----DNPSLQIVKADVTEGSAKL----SEA------ 131 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~-~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~----~~~------ 131 (301)
++++||||+|+||++++++|+++|++|+++.|+ .+.++++..+ ....+.++.+|++| .+++ .+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN-SATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCC-chhhHHHHHHHHHHHHH
Confidence 589999999999999999999999999988765 3343332211 22456788999999 5432 222
Q ss_pred -hcCCCCEEEEccCCCCC-----C--------------CCCCceeeehHHHHHHHHHHHHc----------CCCEEEEec
Q 022216 132 -IGDDSEAVVCATGFQPG-----W--------------DLFAPWKVDNFGTVNLVEACRKR----------GVNRFILIS 181 (301)
Q Consensus 132 -~~~~~d~Vi~~Ag~~~~-----~--------------~~~~~~~~N~~g~~~l~~a~~~~----------~~~~iV~~S 181 (301)
++. +|+||||||.... . ++..++++|+.+.+.+++++.+. +.+++|++|
T Consensus 81 ~~g~-iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~ 159 (267)
T TIGR02685 81 AFGR-CDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC 159 (267)
T ss_pred ccCC-ceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence 244 9999999996321 1 13356899999999999886322 124688888
Q ss_pred ccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCce-e-eccccccc-
Q 022216 182 SILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-I-METEDTLY- 251 (301)
Q Consensus 182 S~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~-~-~~~~~~~~- 251 (301)
|..... +...+..|+.+|.+.+.+.+ ..|++++.|+||.+.++...... . ........
T Consensus 160 s~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T TIGR02685 160 DAMTDQ------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLG 227 (267)
T ss_pred hhhccC------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCC
Confidence 864211 12235678999999987664 36899999999998765322110 0 00001111
Q ss_pred cCCCCHHHHHHHHHHHhcCCC--CCCcEEEeec
Q 022216 252 EGTISRDQVAEVAVEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 252 ~~~v~~~Dva~~~~~~l~~~~--~~~~~~~v~~ 282 (301)
.....++|+|++++.++..+. ..++.+.+.+
T Consensus 228 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~g 260 (267)
T TIGR02685 228 QREASAEQIADVVIFLVSPKAKYITGTCIKVDG 260 (267)
T ss_pred cCCCCHHHHHHHHHHHhCcccCCcccceEEECC
Confidence 135689999999987775432 3445555543
No 259
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.83 E-value=1.1e-19 Score=164.96 Aligned_cols=183 Identities=19% Similarity=0.229 Sum_probs=134.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.++++|+++||||+|+||++++++|+++|++|++++|+.++..+.......++..+.+|++| .+++.+.+++ +|++||
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-~~~v~~~l~~-IDiLIn 251 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-EAALAELLEK-VDILII 251 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-HHHHHHHhCC-CCEEEE
Confidence 45678999999999999999999999999999999998766543322223357788999999 8889999988 999999
Q ss_pred ccCCCCC-----CCCCCceeeehHHHHHHHHHHHH----cCC----CEEEEecccccccccCCCCCCcchhhcchhhHHH
Q 022216 142 ATGFQPG-----WDLFAPWKVDNFGTVNLVEACRK----RGV----NRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (301)
Q Consensus 142 ~Ag~~~~-----~~~~~~~~~N~~g~~~l~~a~~~----~~~----~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~ 208 (301)
|||.... ++++.++++|+.|+.++++++.+ .+. ..+|++|+.. . . + .....|.
T Consensus 252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~----~----~-----~~~~~Y~ 317 (406)
T PRK07424 252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V----N----P-----AFSPLYE 317 (406)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c----c----C-----CCchHHH
Confidence 9996432 24567789999999999999732 221 2355555421 0 0 0 0124689
Q ss_pred HHHHHHHHHH--H--HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC
Q 022216 209 IAKLQAEQYI--R--KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE 272 (301)
Q Consensus 209 ~sK~~~e~~~--~--~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~ 272 (301)
.+|.+.+.+. + +.++.+..+.||.+.+++. ....+++||+|+.++.++.++.
T Consensus 318 ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~------------~~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 318 LSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLN------------PIGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred HHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCC------------cCCCCCHHHHHHHHHHHHHCCC
Confidence 9999987643 2 2466677788887766531 0135799999999999998764
No 260
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.83 E-value=2.4e-20 Score=161.01 Aligned_cols=189 Identities=15% Similarity=0.154 Sum_probs=133.7
Q ss_pred eEEEEcCCchHHHHHHHHHHH----CCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC----
Q 022216 68 KIFVAGATGSSGKRIVEQLLA----KGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD---- 134 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~----~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~---- 134 (301)
+++||||+++||.+++++|++ .|++|+++.|+.+.+++...+ ....+.++.+|++| .+++.+.+..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGA-EAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCC-HHHHHHHHHHHHhc
Confidence 689999999999999999997 799999999988766543321 23468889999999 7666655532
Q ss_pred ------CCCEEEEccCCCCC-----------CCCCCceeeehHHHHHHHHHHHH----c-C-CCEEEEecccccccccCC
Q 022216 135 ------DSEAVVCATGFQPG-----------WDLFAPWKVDNFGTVNLVEACRK----R-G-VNRFILISSILVNGAAMG 191 (301)
Q Consensus 135 ------~~d~Vi~~Ag~~~~-----------~~~~~~~~~N~~g~~~l~~a~~~----~-~-~~~iV~~SS~~~~~~~~~ 191 (301)
+.|+||||||.... ++++..+++|+.+++.+++++.+ . + .++||++||...+..
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~--- 157 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP--- 157 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC---
Confidence 12699999996321 12345789999999888877632 2 2 358999999864321
Q ss_pred CCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceee--cc-------ccccccCCC
Q 022216 192 QILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--ET-------EDTLYEGTI 255 (301)
Q Consensus 192 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~--~~-------~~~~~~~~v 255 (301)
...+..|+.+|.+.+.+.+ ..|++++.|.||++.+++....... .. .......+.
T Consensus 158 ---------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T TIGR01500 158 ---------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLV 228 (256)
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCC
Confidence 1224678999999887654 2589999999999998864321000 00 001112367
Q ss_pred CHHHHHHHHHHHhc
Q 022216 256 SRDQVAEVAVEALL 269 (301)
Q Consensus 256 ~~~Dva~~~~~~l~ 269 (301)
.++|+|+.++.++.
T Consensus 229 ~p~eva~~~~~l~~ 242 (256)
T TIGR01500 229 DPKVSAQKLLSLLE 242 (256)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999988885
No 261
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.83 E-value=2.5e-19 Score=151.69 Aligned_cols=183 Identities=17% Similarity=0.257 Sum_probs=132.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC----CCCEEEE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----DSEAVVC 141 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~Vi~ 141 (301)
+|+|+||||+|+||+++++.|+++|++|++++|++...++.. ...++.++.+|++| .+++.+.++. ++|+|||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~ 77 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ--ALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFV 77 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH--hccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEE
Confidence 368999999999999999999999999999999987655432 22467888999999 6666665542 5999999
Q ss_pred ccCCCCC----------CCCCCceeeehHHHHHHHHHHHHc---CCCEEEEecccccccccCCCCCCcchhhcchhhHHH
Q 022216 142 ATGFQPG----------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (301)
Q Consensus 142 ~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~ 208 (301)
|||.... +++...+++|+.++.++++++... +.++++++||.. +.. +.+ +...+..|+
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~-~~~------~~~~~~~Y~ 148 (225)
T PRK08177 78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSV-ELP------DGGEMPLYK 148 (225)
T ss_pred cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccc-ccC------CCCCccchH
Confidence 9986421 245668899999999999988532 336889998864 221 110 111235688
Q ss_pred HHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCC
Q 022216 209 IAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 209 ~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.+|.+.+.+.+ .++++++.|+||++.+++.... ..++....+.-++..+...
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 207 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN-----------APLDVETSVKGLVEQIEAA 207 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC-----------CCCCHHHHHHHHHHHHHhC
Confidence 99999987664 2579999999999999874321 1245566666665665544
No 262
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.83 E-value=5.4e-20 Score=163.52 Aligned_cols=205 Identities=17% Similarity=0.215 Sum_probs=138.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
+|+++||||+++||++++++|+++| ++|++++|+.++.++.... ....+.++.+|++| .+++.+.+.. +
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCCC
Confidence 6799999999999999999999999 9999999987665443221 23467889999999 6655544321 4
Q ss_pred CCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHH----HcC--CCEEEEecccccccccCC----CC---
Q 022216 136 SEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACR----KRG--VNRFILISSILVNGAAMG----QI--- 193 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~----~~~--~~~iV~~SS~~~~~~~~~----~~--- 193 (301)
+|++|||||+... ++++..+++|+.|.+.+++++. +.+ .++||++||...+..... .+
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence 9999999996321 2345678999999999877763 332 369999999976532110 00
Q ss_pred CC--------------cchhhcchhhHHHHHHHHHHHHH----HH----cCCcEEEEecCccc-CCCCCCceee-----c
Q 022216 194 LN--------------PAYIFLNVFGLTLIAKLQAEQYI----RK----SGINYTIIRPGGLR-NEPPTGNIIM-----E 245 (301)
Q Consensus 194 ~~--------------~~~~~~~~~~~y~~sK~~~e~~~----~~----~~i~~~~irpg~v~-~~~~~~~~~~-----~ 245 (301)
.. ....+..++..|..||++...+. ++ .|++++.|+||.+. +++....... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~ 241 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP 241 (314)
T ss_pred cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence 00 00012245677999999965432 22 47999999999994 7664321100 0
Q ss_pred c-ccccccCCCCHHHHHHHHHHHhcCC
Q 022216 246 T-EDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 246 ~-~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
. ......++.++++.|+.++.++..+
T Consensus 242 ~~~~~~~~~~~~~~~~a~~l~~~~~~~ 268 (314)
T TIGR01289 242 PFQKYITKGYVSEEEAGERLAQVVSDP 268 (314)
T ss_pred HHHHHHhccccchhhhhhhhHHhhcCc
Confidence 0 0000123578999999998877654
No 263
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.4e-18 Score=154.81 Aligned_cols=232 Identities=39% Similarity=0.552 Sum_probs=165.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc--cCCCCeEEEEccCCCChHhHHHHhcC---CC
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD---DS 136 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~ 136 (301)
.+.+.++|||+||||.+|+-+++.|+++|+.|+++.|+..+..+... ........+..|...+.+.+...... ..
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence 34567899999999999999999999999999999999887766542 12344555566665533444444333 14
Q ss_pred CEEEEccCCCCCC-CCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHH
Q 022216 137 EAVVCATGFQPGW-DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE 215 (301)
Q Consensus 137 d~Vi~~Ag~~~~~-~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e 215 (301)
.+++-|+|..++. |...-+.++..|+.|+++||+..|++|+|++||+.. .... ..++.......+...|..+|
T Consensus 155 ~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~---~~~~---~~~~~~~~~~~~~~~k~~~e 228 (411)
T KOG1203|consen 155 VIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGG---TKFN---QPPNILLLNGLVLKAKLKAE 228 (411)
T ss_pred eeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecC---cccC---CCchhhhhhhhhhHHHHhHH
Confidence 5777777765554 345566899999999999999999999999999852 2221 11222222455678899999
Q ss_pred HHHHHcCCcEEEEecCcccCCCCCCcee-eccccccc---c--CCCCHHHHHHHHHHHhcCCCCCC-cEEEeecCCCCCC
Q 022216 216 QYIRKSGINYTIIRPGGLRNEPPTGNII-METEDTLY---E--GTISRDQVAEVAVEALLHPESSY-KVVEIISRVDAPK 288 (301)
Q Consensus 216 ~~~~~~~i~~~~irpg~v~~~~~~~~~~-~~~~~~~~---~--~~v~~~Dva~~~~~~l~~~~~~~-~~~~v~~~~~~~~ 288 (301)
+++++.|+++++||||....+....... ....+..+ . ..++..|+|+.+++++..+...+ .+.++....++..
T Consensus 229 ~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~gpg 308 (411)
T KOG1203|consen 229 KFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEGPG 308 (411)
T ss_pred HHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCCCC
Confidence 9999999999999999888754433322 11111111 1 26889999999999998887666 6667777777777
Q ss_pred cCHHHHHHHhh
Q 022216 289 RSYEDLFGSIK 299 (301)
Q Consensus 289 ~s~~e~~~~i~ 299 (301)
..+.++.+.+.
T Consensus 309 ~~~~~l~~~~~ 319 (411)
T KOG1203|consen 309 RPYKVLLELFP 319 (411)
T ss_pred ccHHHHHhhcc
Confidence 77777766543
No 264
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=5.8e-20 Score=171.26 Aligned_cols=204 Identities=17% Similarity=0.105 Sum_probs=140.0
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc--hhhhccccCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
.++++++|||||+|+||.++++.|+++|++|++++|+.. .+.+... ..+..++.+|++| .+++.+.+..
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN--RVGGTALALDITA-PDAPARIAEHLAERHG 283 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH--HcCCeEEEEeCCC-HHHHHHHHHHHHHhCC
Confidence 356899999999999999999999999999999888532 2222221 1244678999999 6665554431
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHcC----CCEEEEecccccccccCCCCCCcchhhcc
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKRG----VNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~~----~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
++|+||||||+... ++++.++++|+.++.++++++.... .++||++||.+.+... .
T Consensus 284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~------------~ 351 (450)
T PRK08261 284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN------------R 351 (450)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC------------C
Confidence 39999999996532 3456678899999999999996532 3799999998643211 1
Q ss_pred hhhHHHHHHHHHHHHH-------HHcCCcEEEEecCcccCCCCCCceee-c---cccccccCCCCHHHHHHHHHHHhcCC
Q 022216 203 VFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIM-E---TEDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~~-------~~~~i~~~~irpg~v~~~~~~~~~~~-~---~~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
....|..+|...+.+. +..|++++.|.||.+.+++....... . .........-.++|+|+++..++ ++
T Consensus 352 ~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~-s~ 430 (450)
T PRK08261 352 GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLA-SP 430 (450)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHh-Ch
Confidence 1356888888766544 24689999999999988654321110 0 00011122346899999997555 44
Q ss_pred CC---CCcEEEeec
Q 022216 272 ES---SYKVVEIIS 282 (301)
Q Consensus 272 ~~---~~~~~~v~~ 282 (301)
.. .++++.+.+
T Consensus 431 ~~~~itG~~i~v~g 444 (450)
T PRK08261 431 ASGGVTGNVVRVCG 444 (450)
T ss_pred hhcCCCCCEEEECC
Confidence 32 456666654
No 265
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=1.3e-19 Score=146.43 Aligned_cols=215 Identities=16% Similarity=0.141 Sum_probs=159.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA 142 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~ 142 (301)
.|+|||||++|.+|+++++.+.+.|. +=.++.-+ -.+|+++ .+..++.|.. ++.+|||.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------kd~DLt~-~a~t~~lF~~ekPthVIhl 62 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------KDADLTN-LADTRALFESEKPTHVIHL 62 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------ccccccc-hHHHHHHHhccCCceeeeh
Confidence 37899999999999999999999876 32222111 1389999 8889999987 89999999
Q ss_pred cCCCCC-----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchh----hcchhhHHHHHHHH
Q 022216 143 TGFQPG-----WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI----FLNVFGLTLIAKLQ 213 (301)
Q Consensus 143 Ag~~~~-----~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~----~~~~~~~y~~sK~~ 213 (301)
|+.... .....+++.|+.--.|+++.|-+.|++++|+..|.++|.+....|.++... +....-+|...|..
T Consensus 63 AAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~ 142 (315)
T KOG1431|consen 63 AAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRM 142 (315)
T ss_pred HhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHH
Confidence 975432 234566788988889999999999999999999999999888777655421 22223457777866
Q ss_pred HH----HHHHHcCCcEEEEecCcccCCCCCC------------------------ceeeccccccccCCCCHHHHHHHHH
Q 022216 214 AE----QYIRKSGINYTIIRPGGLRNEPPTG------------------------NIIMETEDTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 214 ~e----~~~~~~~i~~~~irpg~v~~~~~~~------------------------~~~~~~~~~~~~~~v~~~Dva~~~~ 265 (301)
+. .+..++|..++.+-|.+++||...- .+...+.....+.|++.+|+|++++
T Consensus 143 idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i 222 (315)
T KOG1431|consen 143 IDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFI 222 (315)
T ss_pred HHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHH
Confidence 64 3445789999999999999984221 1223344444556999999999999
Q ss_pred HHhcCCCCCCcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 266 EALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 266 ~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
++|.+=. .-+..++..+ ..+.+|++|+++++.+
T Consensus 223 ~vlr~Y~-~vEpiils~g-e~~EVtI~e~aeaV~e 255 (315)
T KOG1431|consen 223 WVLREYE-GVEPIILSVG-ESDEVTIREAAEAVVE 255 (315)
T ss_pred HHHHhhc-CccceEeccC-ccceeEHHHHHHHHHH
Confidence 8886533 4455666664 1249999999998865
No 266
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=3.7e-20 Score=143.85 Aligned_cols=196 Identities=14% Similarity=0.107 Sum_probs=147.8
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC--CCCEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV 140 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vi 140 (301)
++.|+.|+|||+.-+||+++++.|++.|++|+++.|++..+..+..+.+.-+..+.+|+.+ -+.+.+.+.. ++|.++
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~-wea~~~~l~~v~pidgLV 82 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSA-WEALFKLLVPVFPIDGLV 82 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccH-HHHHHHhhcccCchhhhh
Confidence 4579999999999999999999999999999999999999998887666669999999999 7888888766 799999
Q ss_pred EccCCCC--------CCCCCCceeeehHHHHHHHHHHH----HcC-CCEEEEecccccccccCCCCCCcchhhcchhhHH
Q 022216 141 CATGFQP--------GWDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLT 207 (301)
Q Consensus 141 ~~Ag~~~--------~~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y 207 (301)
||||+.. .++++..|++|+.+.+++.|... ..+ .+.||++||.+..- .. .....|
T Consensus 83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R---~~---------~nHtvY 150 (245)
T KOG1207|consen 83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR---PL---------DNHTVY 150 (245)
T ss_pred ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc---cc---------CCceEE
Confidence 9999743 35788899999999999888842 223 35799999986321 11 112344
Q ss_pred HHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccc------cCCCCHHHHHHHHHHHhcCC
Q 022216 208 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLY------EGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 208 ~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~------~~~v~~~Dva~~~~~~l~~~ 271 (301)
..+|.+.+.+.+ ..+||++.+.|.-+++.+....+.-+...... ..|-.++++.++++.+|.+.
T Consensus 151 catKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 151 CATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred eecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecC
Confidence 555555553322 35799999999999999876654433322222 23567899999996555443
No 267
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.83 E-value=3.2e-19 Score=151.94 Aligned_cols=194 Identities=15% Similarity=0.189 Sum_probs=133.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHH---HhcCCCCEEEE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSE---AIGDDSEAVVC 141 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~---~~~~~~d~Vi~ 141 (301)
|+|+||||+|+||++++++|+++| +.|....|+.... . ...++.++++|++| .+++.+ .+++ +|+|||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~---~~~~~~~~~~Dls~-~~~~~~~~~~~~~-id~li~ 73 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F---QHDNVQWHALDVTD-EAEIKQLSEQFTQ-LDWLIN 73 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c---ccCceEEEEecCCC-HHHHHHHHHhcCC-CCEEEE
Confidence 589999999999999999999985 5565555544321 1 23578899999999 665554 4455 999999
Q ss_pred ccCCCCCC--------------CCCCceeeehHHHHHHHHHHHH----cCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 142 ATGFQPGW--------------DLFAPWKVDNFGTVNLVEACRK----RGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 142 ~Ag~~~~~--------------~~~~~~~~N~~g~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
|||..... ++...+++|+.+...+++++.. .+.++++++||.. +..... ...+
T Consensus 74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~~-------~~~~ 144 (235)
T PRK09009 74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISDN-------RLGG 144 (235)
T ss_pred CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccccC-------CCCC
Confidence 99975321 1334678999999888888743 3346899998853 111110 0123
Q ss_pred hhHHHHHHHHHHHHHHH---------cCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCC--
Q 022216 204 FGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE-- 272 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~~---------~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~-- 272 (301)
+..|+.+|.+.+.+.+. .+++++.|.||.+.+++..... . ......+.+++|+|+.++.++..+.
T Consensus 145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~---~-~~~~~~~~~~~~~a~~~~~l~~~~~~~ 220 (235)
T PRK09009 145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ---Q-NVPKGKLFTPEYVAQCLLGIIANATPA 220 (235)
T ss_pred cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh---h-ccccCCCCCHHHHHHHHHHHHHcCChh
Confidence 46788899988876531 4899999999999998754321 1 1112336789999999988887653
Q ss_pred CCCcEEEe
Q 022216 273 SSYKVVEI 280 (301)
Q Consensus 273 ~~~~~~~v 280 (301)
..+..+.+
T Consensus 221 ~~g~~~~~ 228 (235)
T PRK09009 221 QSGSFLAY 228 (235)
T ss_pred hCCcEEee
Confidence 23444433
No 268
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.82 E-value=4.3e-19 Score=155.76 Aligned_cols=210 Identities=18% Similarity=0.249 Sum_probs=144.7
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc-----cCCCCeEEEEccCCCChHhHHHHhcC--
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD-- 134 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~~-- 134 (301)
..+++++++||||++|||.++|++|+.+|++|+...|+.++.++... ....++.++++|+++ .+++.+....
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLss-l~SV~~fa~~~~ 109 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSS-LKSVRKFAEEFK 109 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-HHHHHHHHHHHH
Confidence 45578999999999999999999999999999999999866554332 145678889999999 7666654322
Q ss_pred ----CCCEEEEccCCCC------CCCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccc--cCCCCCCcch
Q 022216 135 ----DSEAVVCATGFQP------GWDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGA--AMGQILNPAY 198 (301)
Q Consensus 135 ----~~d~Vi~~Ag~~~------~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~--~~~~~~~~~~ 198 (301)
++|++|||||+.. .+..+.++.+|..|.+.|.+.+ +.....|||++||... +. .......+..
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~ 188 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKA 188 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhc
Confidence 5999999999753 2457889999999998888877 3333379999999864 11 1111111111
Q ss_pred hhcchhhHHHHHHHHHHHHH----HH--cCCcEEEEecCcccCCCCCCce-eec-cccccccC-CCCHHHHHHHHHHHhc
Q 022216 199 IFLNVFGLTLIAKLQAEQYI----RK--SGINYTIIRPGGLRNEPPTGNI-IME-TEDTLYEG-TISRDQVAEVAVEALL 269 (301)
Q Consensus 199 ~~~~~~~~y~~sK~~~e~~~----~~--~~i~~~~irpg~v~~~~~~~~~-~~~-~~~~~~~~-~v~~~Dva~~~~~~l~ 269 (301)
........|..||.+...+. ++ .|+.++.++||.+.++...... ... ........ +-++++-|...+.+..
T Consensus 189 ~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~ 268 (314)
T KOG1208|consen 189 KLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAAL 268 (314)
T ss_pred cCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehhcc
Confidence 11333446999999886443 22 2899999999999998433310 000 00001111 2367888888888887
Q ss_pred CCCC
Q 022216 270 HPES 273 (301)
Q Consensus 270 ~~~~ 273 (301)
+|+.
T Consensus 269 ~p~~ 272 (314)
T KOG1208|consen 269 SPEL 272 (314)
T ss_pred Cccc
Confidence 7753
No 269
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.81 E-value=5e-19 Score=150.05 Aligned_cols=180 Identities=10% Similarity=0.006 Sum_probs=127.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHHh-------
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAI------- 132 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~------- 132 (301)
++++|+++||||+++||++++++|+++|++|+++.|+.+++++... .....+..+.+|++| .+++.+.+
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQF 80 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999999999877655432 124567788999999 66665443
Q ss_pred c-CCCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHH----HHcC-CCEEEEecccccccccCCCCCCcc
Q 022216 133 G-DDSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRG-VNRFILISSILVNGAAMGQILNPA 197 (301)
Q Consensus 133 ~-~~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~----~~~~-~~~iV~~SS~~~~~~~~~~~~~~~ 197 (301)
+ . +|++|||||.... +++...+++|+.+.+.+++++ ++.+ .++||++||...+ +
T Consensus 81 g~~-iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------~---- 149 (227)
T PRK08862 81 NRA-PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------Q---- 149 (227)
T ss_pred CCC-CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC------C----
Confidence 4 4 9999999974321 133446678888888877765 3333 4699999996421 1
Q ss_pred hhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCH-HHHHHHHHHHhc
Q 022216 198 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISR-DQVAEVAVEALL 269 (301)
Q Consensus 198 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~-~Dva~~~~~~l~ 269 (301)
.+..|..+|.+.+.+.+ .+|++++.|.||++.++.... .. .|... +|++.+...++.
T Consensus 150 -----~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~-------~~---~~~~~~~~~~~~~~~l~~ 214 (227)
T PRK08862 150 -----DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD-------AV---HWAEIQDELIRNTEYIVA 214 (227)
T ss_pred -----CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC-------HH---HHHHHHHHHHhheeEEEe
Confidence 13557788888776553 468999999999999873211 00 11122 788888755554
No 270
>PLN00015 protochlorophyllide reductase
Probab=99.80 E-value=7.2e-19 Score=155.92 Aligned_cols=201 Identities=16% Similarity=0.230 Sum_probs=133.1
Q ss_pred EEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcC------CCCEE
Q 022216 70 FVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD------DSEAV 139 (301)
Q Consensus 70 lVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~V 139 (301)
+||||+++||.+++++|+++| ++|++..|+.++.++.... ....+.++.+|++| .+++.+++.. ++|+|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLAS-LDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCC-HHHHHHHHHHHHhcCCCCCEE
Confidence 699999999999999999999 9999999987665443321 23467889999999 7666555431 49999
Q ss_pred EEccCCCCC---------CCCCCceeeehHHHHHHHHHH----HHcC--CCEEEEecccccccccC-C--CC----CC--
Q 022216 140 VCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRG--VNRFILISSILVNGAAM-G--QI----LN-- 195 (301)
Q Consensus 140 i~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~----~~~~--~~~iV~~SS~~~~~~~~-~--~~----~~-- 195 (301)
|||||+... ++++..+++|+.|.+.+++++ ++.+ .++||++||...+-... + .+ ..
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 999996421 234567899999988887776 3333 47999999986541100 0 00 00
Q ss_pred --------c------chhhcchhhHHHHHHHHHHHHH----HH----cCCcEEEEecCcc-cCCCCCCceeecc------
Q 022216 196 --------P------AYIFLNVFGLTLIAKLQAEQYI----RK----SGINYTIIRPGGL-RNEPPTGNIIMET------ 246 (301)
Q Consensus 196 --------~------~~~~~~~~~~y~~sK~~~e~~~----~~----~~i~~~~irpg~v-~~~~~~~~~~~~~------ 246 (301)
. .......+..|..||++.+.+. ++ .|++++.|+||++ .+++.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~ 239 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF 239 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence 0 0011234677999999855332 22 4799999999999 4665432110000
Q ss_pred ccccccCCCCHHHHHHHHHHHhcCC
Q 022216 247 EDTLYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 247 ~~~~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.......+.++++.|+.++.++.+.
T Consensus 240 ~~~~~~~~~~pe~~a~~~~~l~~~~ 264 (308)
T PLN00015 240 QKYITKGYVSEEEAGKRLAQVVSDP 264 (308)
T ss_pred HHHHhcccccHHHhhhhhhhhcccc
Confidence 0001123578999999987766543
No 271
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.79 E-value=1.4e-18 Score=140.85 Aligned_cols=183 Identities=21% Similarity=0.314 Sum_probs=129.5
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEE-EeCCchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~-~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
+.+.|+||||++|||..++++|++. |.++++. .|++++..+.. ...+.++++++.|+++ .+++.+...+
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~-deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTC-DESIDNFVQEVEKIV 80 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEeccc-HHHHHHHHHHHHhhc
Confidence 4678999999999999999999977 6666655 45577633222 2257899999999999 6666655432
Q ss_pred ---CCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHH----HHcCC-----------CEEEEeccccccc
Q 022216 135 ---DSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEAC----RKRGV-----------NRFILISSILVNG 187 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~----~~~~~-----------~~iV~~SS~~~~~ 187 (301)
++|++|+|||+... ..|..++++|..|...+.|++ ++... ..||++||.+..
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s- 159 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS- 159 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc-
Confidence 58999999997532 235678999999988888776 22221 279999998632
Q ss_pred ccCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHH
Q 022216 188 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQV 260 (301)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dv 260 (301)
..+ ....++.+|..||.+.-.+.+ +.+|-++.++||||.|++.... ..+++++-
T Consensus 160 -~~~-------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~-----------a~ltveeS 220 (249)
T KOG1611|consen 160 -IGG-------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK-----------AALTVEES 220 (249)
T ss_pred -cCC-------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC-----------cccchhhh
Confidence 111 112336789999999887665 3567789999999999986633 34566665
Q ss_pred HHHHHHHh
Q 022216 261 AEVAVEAL 268 (301)
Q Consensus 261 a~~~~~~l 268 (301)
+.-++..+
T Consensus 221 ts~l~~~i 228 (249)
T KOG1611|consen 221 TSKLLASI 228 (249)
T ss_pred HHHHHHHH
Confidence 55555444
No 272
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.79 E-value=2.8e-17 Score=137.45 Aligned_cols=226 Identities=19% Similarity=0.106 Sum_probs=170.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh-------ccccCCCCeEEEEccCCCChHhHHHHhcC-CCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-------TLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSE 137 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d 137 (301)
+|++||||-||+-|+++++.|++.|++|+++.|+.+.... ..-....++..+.+|++| ...+.+++.. .+|
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD-~~~l~r~l~~v~Pd 80 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTD-SSNLLRILEEVQPD 80 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccc-hHHHHHHHHhcCch
Confidence 5899999999999999999999999999999998543211 111134568899999999 8888888876 799
Q ss_pred EEEEccCCCC----CCCCCCceeeehHHHHHHHHHHHHcCC--CEEEEecccccccccCCCCCCcchhhcchhhHHHHHH
Q 022216 138 AVVCATGFQP----GWDLFAPWKVDNFGTVNLVEACRKRGV--NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK 211 (301)
Q Consensus 138 ~Vi~~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~--~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK 211 (301)
-|+|.|+... .+.+..+.++|-.|+.+|+++.+-.+. -||...||.-.||.....|.. +..|..|.++|+.+|
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~-E~TPFyPrSPYAvAK 159 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQK-ETTPFYPRSPYAVAK 159 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccc-cCCCCCCCCHHHHHH
Confidence 9999998643 356778889999999999999988753 478889998889877655543 345677889999999
Q ss_pred HHHHHHH----HHcCCcEEEEecCcccCCCCCCceee-------------------ccccccccCCCCHHHHHHHHHHHh
Q 022216 212 LQAEQYI----RKSGINYTIIRPGGLRNEPPTGNIIM-------------------ETEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 212 ~~~e~~~----~~~~i~~~~irpg~v~~~~~~~~~~~-------------------~~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
+.+.... +.+|+-.+.=...+-.+|.....++. -+.-....+|-+..|-++++...|
T Consensus 160 lYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmL 239 (345)
T COG1089 160 LYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLML 239 (345)
T ss_pred HHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHH
Confidence 9987543 35777655544444455543332211 111222346889999999997777
Q ss_pred cCCCCCCcEEEeecCCCCCCcCHHHHHHHh
Q 022216 269 LHPESSYKVVEIISRVDAPKRSYEDLFGSI 298 (301)
Q Consensus 269 ~~~~~~~~~~~v~~~~~~~~~s~~e~~~~i 298 (301)
+.+. ...|.+..+ +..|++|+++.-
T Consensus 240 Qq~~--PddyViATg---~t~sVrefv~~A 264 (345)
T COG1089 240 QQEE--PDDYVIATG---ETHSVREFVELA 264 (345)
T ss_pred ccCC--CCceEEecC---ceeeHHHHHHHH
Confidence 7765 567999996 999999998864
No 273
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.78 E-value=1e-17 Score=151.74 Aligned_cols=235 Identities=18% Similarity=0.197 Sum_probs=160.9
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCC---CeEEEEEeCCchhh------hc---------c---ccCCCCeEEEEccCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAK------TT---------L---SKDNPSLQIVKADVT 122 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G---~~V~~~~r~~~~~~------~~---------~---~~~~~~~~~~~~Dl~ 122 (301)
+++|+|+|||||||+|+-++++|+..- -+++++.|...... .. + ++...++..+.||+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 468999999999999999999999763 37888888753311 00 1 112367889999998
Q ss_pred CCh-----HhHHHHhcCCCCEEEEccCCCCC-CCCCCceeeehHHHHHHHHHHHHcC-CCEEEEecccccccccC---CC
Q 022216 123 EGS-----AKLSEAIGDDSEAVVCATGFQPG-WDLFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAM---GQ 192 (301)
Q Consensus 123 ~~~-----~~~~~~~~~~~d~Vi~~Ag~~~~-~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~---~~ 192 (301)
++. ........+ +|+|||+|+.... +..+....+|..|+.++++.|++.. .+-+|++|+..+.-... ..
T Consensus 90 ~~~LGis~~D~~~l~~e-V~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~ 168 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADE-VNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEK 168 (467)
T ss_pred CcccCCChHHHHHHHhc-CCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccc
Confidence 842 444556677 9999999986553 3445667899999999999998874 67899999988651111 00
Q ss_pred CCC------cc------------hh-----h--cchhhHHHHHHHHHHHHHHH--cCCcEEEEecCcccCCCCCC---c-
Q 022216 193 ILN------PA------------YI-----F--LNVFGLTLIAKLQAEQYIRK--SGINYTIIRPGGLRNEPPTG---N- 241 (301)
Q Consensus 193 ~~~------~~------------~~-----~--~~~~~~y~~sK~~~e~~~~~--~~i~~~~irpg~v~~~~~~~---~- 241 (301)
+.. +. +. . ...-+.|..+|..+|+++.+ .+++++|+||+.|....... +
T Consensus 169 ~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWi 248 (467)
T KOG1221|consen 169 PYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWI 248 (467)
T ss_pred ccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcc
Confidence 000 00 00 0 11235688999999998864 68999999999876642111 1
Q ss_pred --------eee----------ccccccccCCCCHHHHHHHHHHHhcC-----CCCCCcEEEeecCCCCCCcCHHHHHHHh
Q 022216 242 --------IIM----------ETEDTLYEGTISRDQVAEVAVEALLH-----PESSYKVVEIISRVDAPKRSYEDLFGSI 298 (301)
Q Consensus 242 --------~~~----------~~~~~~~~~~v~~~Dva~~~~~~l~~-----~~~~~~~~~v~~~~~~~~~s~~e~~~~i 298 (301)
+.. ....+.....+++|.++++++.+... +.....+||+++ +.-.+++|.++.+..
T Consensus 249 dn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~ts-s~~Np~t~~~~~e~~ 327 (467)
T KOG1221|consen 249 DNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTS-SNDNPVTWGDFIELA 327 (467)
T ss_pred ccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecc-cccCcccHHHHHHHH
Confidence 111 11223334578999999998865521 112355999999 445899999999876
Q ss_pred hc
Q 022216 299 KQ 300 (301)
Q Consensus 299 ~~ 300 (301)
.+
T Consensus 328 ~~ 329 (467)
T KOG1221|consen 328 LR 329 (467)
T ss_pred HH
Confidence 54
No 274
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.78 E-value=1.6e-18 Score=139.06 Aligned_cols=160 Identities=18% Similarity=0.235 Sum_probs=126.4
Q ss_pred CCeEEEEcC-CchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-------CCC
Q 022216 66 QKKIFVAGA-TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-------DSE 137 (301)
Q Consensus 66 ~~~vlVtGa-tG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------~~d 137 (301)
.|+|||||+ .||||.+++++|.++|+.|++..|+.+...++. ...++..++.|+++ ++++.+..+. ++|
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~--~~~gl~~~kLDV~~-~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA--IQFGLKPYKLDVSK-PEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH--HhhCCeeEEeccCC-hHHHHHHHHHHhhCCCCceE
Confidence 578888875 689999999999999999999999998887765 34679999999999 6666655432 699
Q ss_pred EEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHc---CCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 138 AVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 138 ~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
+++||||.... .+.+..|++|+.|..+++++.... ..+.||+++|...|- +....+.
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v------------pfpf~~i 151 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV------------PFPFGSI 151 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe------------ccchhhh
Confidence 99999996432 234678999999999988887421 236999999987552 2233578
Q ss_pred HHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCC
Q 022216 207 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG 240 (301)
Q Consensus 207 y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~ 240 (301)
|.+||++..++.+ .+|++++.+-+|.+.+...+.
T Consensus 152 YsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 152 YSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred hhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 8999999987764 479999999999999875444
No 275
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.78 E-value=1.7e-19 Score=154.36 Aligned_cols=189 Identities=19% Similarity=0.244 Sum_probs=130.3
Q ss_pred cCC--chHHHHHHHHHHHCCCeEEEEEeCCchh----hhccccCCCCeEEEEccCCCChHhHHHH-------h-cCCCCE
Q 022216 73 GAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKA----KTTLSKDNPSLQIVKADVTEGSAKLSEA-------I-GDDSEA 138 (301)
Q Consensus 73 Gat--G~iG~~~~~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~-~~~~d~ 138 (301)
|++ ++||++++++|+++|++|++.+|+.++. +++..+.+ ..++.+|++| ++++.+. + +. +|+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~--~~~~~~D~~~-~~~v~~~~~~~~~~~~g~-iD~ 76 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG--AEVIQCDLSD-EESVEALFDEAVERFGGR-IDI 76 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT--SEEEESCTTS-HHHHHHHHHHHHHHHCSS-ESE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC--CceEeecCcc-hHHHHHHHHHHHhhcCCC-eEE
Confidence 666 9999999999999999999999998874 33332222 4469999999 6555544 5 55 999
Q ss_pred EEEccCCCCC------------CCCCCceeeehHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCCcchhhcchh
Q 022216 139 VVCATGFQPG------------WDLFAPWKVDNFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVF 204 (301)
Q Consensus 139 Vi~~Ag~~~~------------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
+|||+|.... ++|...+++|+.+...+++++.+. .-+++|++||...... ...+
T Consensus 77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~------------~~~~ 144 (241)
T PF13561_consen 77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP------------MPGY 144 (241)
T ss_dssp EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB------------STTT
T ss_pred EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc------------Cccc
Confidence 9999986543 234567789999999999988432 1268999999863221 1224
Q ss_pred hHHHHHHHHHHHHHH-------H-cCCcEEEEecCcccCCCCCCc-----eeecccc-ccccCCCCHHHHHHHHHHHhcC
Q 022216 205 GLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEPPTGN-----IIMETED-TLYEGTISRDQVAEVAVEALLH 270 (301)
Q Consensus 205 ~~y~~sK~~~e~~~~-------~-~~i~~~~irpg~v~~~~~~~~-----~~~~~~~-~~~~~~v~~~Dva~~~~~~l~~ 270 (301)
..|..+|.+.+.+.+ . +|||+|.|.||++.++..... ....... .....+..++|+|++++ +|.+
T Consensus 145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~-fL~s 223 (241)
T PF13561_consen 145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVL-FLAS 223 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHH-HHHS
T ss_pred hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHH-HHhC
Confidence 578888888876553 4 799999999999998752211 0001111 12223468999999994 5556
Q ss_pred CCCCCcEE
Q 022216 271 PESSYKVV 278 (301)
Q Consensus 271 ~~~~~~~~ 278 (301)
+.+.+.+.
T Consensus 224 ~~a~~itG 231 (241)
T PF13561_consen 224 DAASYITG 231 (241)
T ss_dssp GGGTTGTS
T ss_pred ccccCccC
Confidence 65444333
No 276
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.77 E-value=4.8e-17 Score=141.49 Aligned_cols=207 Identities=25% Similarity=0.280 Sum_probs=156.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~ 146 (301)
++||||||||++|++++++|+++|++|+++.|+++...... ..+.+..+|+.+ ...+...+.+ +|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~-~~~l~~a~~G-~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----GGVEVVLGDLRD-PKSLVAGAKG-VDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----CCcEEEEeccCC-HhHHHHHhcc-ccEEEEEeccc
Confidence 57999999999999999999999999999999998877654 789999999999 8999999999 99999988755
Q ss_pred CCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEE
Q 022216 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 226 (301)
Q Consensus 147 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~ 226 (301)
. .+. ...........+..+++. .+.++++.+|...... .....|..+|...|+.+...|++++
T Consensus 75 ~-~~~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~--------------~~~~~~~~~~~~~e~~l~~sg~~~t 137 (275)
T COG0702 75 D-GSD-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA--------------ASPSALARAKAAVEAALRSSGIPYT 137 (275)
T ss_pred c-ccc-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC--------------CCccHHHHHHHHHHHHHHhcCCCeE
Confidence 4 222 223333444444444444 3467888888874211 1135678999999999999999999
Q ss_pred EEecCcccCCCCCCc---------eeeccccccccCCCCHHHHHHHHHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHH
Q 022216 227 IIRPGGLRNEPPTGN---------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGS 297 (301)
Q Consensus 227 ~irpg~v~~~~~~~~---------~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~ 297 (301)
++||..++....... ........ ...++..+|+++++...+..+...+++|.+.++ +..+..|+.+.
T Consensus 138 ~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~---~~~~~~~~~~~ 213 (275)
T COG0702 138 TLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIG-RLSPIAVDDVAEALAAALDAPATAGRTYELAGP---EALTLAELASG 213 (275)
T ss_pred EEecCeeeeccchhHHHHHHhhCCceecCCCC-ceeeeEHHHHHHHHHHHhcCCcccCcEEEccCC---ceecHHHHHHH
Confidence 999666655432221 11111111 235789999999999999888778899999995 88999998887
Q ss_pred hhc
Q 022216 298 IKQ 300 (301)
Q Consensus 298 i~~ 300 (301)
+.+
T Consensus 214 l~~ 216 (275)
T COG0702 214 LDY 216 (275)
T ss_pred HHH
Confidence 653
No 277
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=3.1e-18 Score=150.54 Aligned_cols=209 Identities=16% Similarity=0.141 Sum_probs=126.9
Q ss_pred hcccCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEeCC---------chhh--hcc-ccCCC-----CeEEEEccCC
Q 022216 62 VSVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL---------DKAK--TTL-SKDNP-----SLQIVKADVT 122 (301)
Q Consensus 62 ~~~~~~~vlVtGat--G~iG~~~~~~l~~~G~~V~~~~r~~---------~~~~--~~~-~~~~~-----~~~~~~~Dl~ 122 (301)
..+++|++|||||+ .+||++++++|+++|++|++.++.+ +..+ ... ..... .+..+.+|++
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 83 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD 83 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence 35579999999995 9999999999999999999866431 0000 000 00000 1111223333
Q ss_pred CCh-----------------HhHH-------HHhcCCCCEEEEccCCCC----------CCCCCCceeeehHHHHHHHHH
Q 022216 123 EGS-----------------AKLS-------EAIGDDSEAVVCATGFQP----------GWDLFAPWKVDNFGTVNLVEA 168 (301)
Q Consensus 123 ~~~-----------------~~~~-------~~~~~~~d~Vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a 168 (301)
+.+ +++. +.++. +|++|||||... .++|+..+++|+.|.++++++
T Consensus 84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~-lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a 162 (299)
T PRK06300 84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGH-IDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH 162 (299)
T ss_pred CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCC-CcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 311 1222 33345 999999998532 135677889999999999999
Q ss_pred HHHc--CCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------H-cCCcEEEEecCcccCCCC
Q 022216 169 CRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEPP 238 (301)
Q Consensus 169 ~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~i~~~~irpg~v~~~~~ 238 (301)
+.+. ..+++|++||....- +.+ .+ ...|..+|.+.+.+.+ . +||+++.|.||.+.+++.
T Consensus 163 ~~p~m~~~G~ii~iss~~~~~---~~p---~~-----~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~ 231 (299)
T PRK06300 163 FGPIMNPGGSTISLTYLASMR---AVP---GY-----GGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAG 231 (299)
T ss_pred HHHHhhcCCeEEEEeehhhcC---cCC---Cc-----cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhh
Confidence 8542 226899999875321 111 10 1368888888876542 2 489999999999999864
Q ss_pred CCceeec------cccccccCCCCHHHHHHHHHHHhcCCC--CCCcEEEeec
Q 022216 239 TGNIIME------TEDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS 282 (301)
Q Consensus 239 ~~~~~~~------~~~~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~~v~~ 282 (301)
....... ...........++|+|++++.++.... ..++++.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG 283 (299)
T PRK06300 232 KAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDH 283 (299)
T ss_pred hcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 3210000 001111235689999999966554321 3455555543
No 278
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=5.4e-18 Score=135.40 Aligned_cols=166 Identities=15% Similarity=0.207 Sum_probs=120.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHh---cC---CCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI---GD---DSE 137 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~---~~d 137 (301)
+.|-+||||||+.|||.+++++|.+.|.+|++.+|+.+.+++.+. ..+.+....+|+.| .++.++.. .. .++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~-~~p~~~t~v~Dv~d-~~~~~~lvewLkk~~P~lN 80 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA-ENPEIHTEVCDVAD-RDSRRELVEWLKKEYPNLN 80 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHh-cCcchheeeecccc-hhhHHHHHHHHHhhCCchh
Confidence 457899999999999999999999999999999999999988775 55788899999999 54333322 21 499
Q ss_pred EEEEccCCCCCCC----------CCCceeeehHHHHHHHHHHH----HcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 138 AVVCATGFQPGWD----------LFAPWKVDNFGTVNLVEACR----KRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 138 ~Vi~~Ag~~~~~~----------~~~~~~~N~~g~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
++|||||+....| ....+++|+.++.+|..++. +..-.-||++||...+-... ..|.|+..|.
T Consensus 81 vliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~---~~PvYcaTKA 157 (245)
T COG3967 81 VLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA---STPVYCATKA 157 (245)
T ss_pred eeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc---ccccchhhHH
Confidence 9999999865422 23446799999988888773 33446899999986442211 1234444432
Q ss_pred hhHHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Q 022216 204 FGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNE 236 (301)
Q Consensus 204 ~~~y~~sK~~~e~~~~~~~i~~~~irpg~v~~~ 236 (301)
..+..++..-|+ ++..+++|.-+-|..|.++
T Consensus 158 -aiHsyt~aLR~Q-lk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 158 -AIHSYTLALREQ-LKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred -HHHHHHHHHHHH-hhhcceEEEEecCCceecC
Confidence 222333333333 4567899999999999986
No 279
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.76 E-value=8.2e-18 Score=143.99 Aligned_cols=179 Identities=16% Similarity=0.059 Sum_probs=126.1
Q ss_pred HHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC---CCCEEEEccCCCCCCCCCCceeee
Q 022216 82 IVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCATGFQPGWDLFAPWKVD 158 (301)
Q Consensus 82 ~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~Vi~~Ag~~~~~~~~~~~~~N 158 (301)
++++|+++|++|++++|+.++.. ...++++|++| .+++.+.++. ++|+||||||.....+++..+++|
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~--------~~~~~~~Dl~~-~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN 71 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT--------LDGFIQADLGD-PASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVN 71 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh--------hhHhhcccCCC-HHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhc
Confidence 47899999999999999876532 13567899999 7777777653 499999999986666788899999
Q ss_pred hHHHHHHHHHHHHc--CCCEEEEecccccccccCCCCCC---------cc------hhhcchhhHHHHHHHHHHHHH---
Q 022216 159 NFGTVNLVEACRKR--GVNRFILISSILVNGAAMGQILN---------PA------YIFLNVFGLTLIAKLQAEQYI--- 218 (301)
Q Consensus 159 ~~g~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~---------~~------~~~~~~~~~y~~sK~~~e~~~--- 218 (301)
+.++..+++++.+. ..++||++||...|+.....+.. +. ..+......|+.+|.+.+.+.
T Consensus 72 ~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 151 (241)
T PRK12428 72 FLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQ 151 (241)
T ss_pred hHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHH
Confidence 99999999998653 23699999999887532110000 00 012334578999999987543
Q ss_pred -----HHcCCcEEEEecCcccCCCCCCceee------ccccccccCCCCHHHHHHHHHHHhc
Q 022216 219 -----RKSGINYTIIRPGGLRNEPPTGNIIM------ETEDTLYEGTISRDQVAEVAVEALL 269 (301)
Q Consensus 219 -----~~~~i~~~~irpg~v~~~~~~~~~~~------~~~~~~~~~~v~~~Dva~~~~~~l~ 269 (301)
...|++++.|+||.+.|++....... .........+..++|+|++++.++.
T Consensus 152 a~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s 213 (241)
T PRK12428 152 AQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCS 213 (241)
T ss_pred HHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcC
Confidence 23589999999999999874331100 0000112235689999999976653
No 280
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=99.75 E-value=3.7e-17 Score=133.15 Aligned_cols=227 Identities=13% Similarity=0.145 Sum_probs=169.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA 142 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~ 142 (301)
+..+|||||+-|.+|..+++.|... |.+-+++..-....+.. ...-.++..|+.| ...+++..-+ ++|-+||.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V----~~~GPyIy~DILD-~K~L~eIVVn~RIdWL~Hf 117 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV----TDVGPYIYLDILD-QKSLEEIVVNKRIDWLVHF 117 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh----cccCCchhhhhhc-cccHHHhhcccccceeeeH
Confidence 4579999999999999999988876 65444443222222222 2455678899999 7888888765 79999998
Q ss_pred cCC---CCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHH-
Q 022216 143 TGF---QPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI- 218 (301)
Q Consensus 143 Ag~---~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~- 218 (301)
.+. ..+.+.....++|+.|..|+++.+++++. ++...|+++++|...+.-..++.+-+.|...||.||..+|-+-
T Consensus 118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GE 196 (366)
T KOG2774|consen 118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGE 196 (366)
T ss_pred HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHH
Confidence 653 23455667789999999999999999986 7788899999987766555677777888999999999998422
Q ss_pred ---HHcCCcEEEEecCcccCC--CCC----------------CceeeccccccccCCCCHHHHHHHHHHHhcCCC--CCC
Q 022216 219 ---RKSGINYTIIRPGGLRNE--PPT----------------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPE--SSY 275 (301)
Q Consensus 219 ---~~~~i~~~~irpg~v~~~--~~~----------------~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~--~~~ 275 (301)
.++|+++-.+|...+... +.. ++....-......+.++.+|+-+++++++..+. -..
T Consensus 197 y~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkr 276 (366)
T KOG2774|consen 197 YFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKR 276 (366)
T ss_pred HHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhh
Confidence 357899888886655543 111 112222233444567899999999999998765 356
Q ss_pred cEEEeecCCCCCCcCHHHHHHHhhcC
Q 022216 276 KVVEIISRVDAPKRSYEDLFGSIKQR 301 (301)
Q Consensus 276 ~~~~v~~~~~~~~~s~~e~~~~i~~~ 301 (301)
++||+.. ..++-+|++..+.++
T Consensus 277 r~ynvt~----~sftpee~~~~~~~~ 298 (366)
T KOG2774|consen 277 RTYNVTG----FSFTPEEIADAIRRV 298 (366)
T ss_pred heeeece----eccCHHHHHHHHHhh
Confidence 7999998 899999999998764
No 281
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.75 E-value=1.5e-17 Score=141.64 Aligned_cols=163 Identities=26% Similarity=0.420 Sum_probs=128.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccC-CCCeEEEEccCCCChHhHHHHhc-------C
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIG-------D 134 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~ 134 (301)
+.++|.|||||+..++|..+|++|.+.|++|.+-.-.++..+.+..+. .++...++.|+++ ++++.++.+ +
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~-~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK-PESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCC-HHHHHHHHHHHHHhccc
Confidence 345789999999999999999999999999999887777767665544 7889999999999 777777653 2
Q ss_pred -CCCEEEEccCCCC---C------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhh
Q 022216 135 -DSEAVVCATGFQP---G------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~---~------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
+.=.||||||+.. + ++++.++++|+.|+..+.+++ +++. +|||++||++ | ...
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~--G-R~~--------- 171 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVL--G-RVA--------- 171 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccc--c-Ccc---------
Confidence 4779999999542 2 345667899999998888887 3443 7999999996 2 211
Q ss_pred cchhhHHHHHHHHHHHHH-------HHcCCcEEEEecCcccCCCCC
Q 022216 201 LNVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPT 239 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~-------~~~~i~~~~irpg~v~~~~~~ 239 (301)
....+.|..||.+.|.+. +.+|++|.+|.||.+.++...
T Consensus 172 ~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 172 LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 122577889999998654 458999999999988887654
No 282
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.75 E-value=1.7e-18 Score=134.49 Aligned_cols=206 Identities=18% Similarity=0.155 Sum_probs=151.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC------CCC
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE 137 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 137 (301)
.++-+.|||||.+++|++.+++|+++|+.|.+++-..++..+..++.+.++.+..+|+++ ++.+..++.. ++|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvts-ekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTS-EKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCc-HHHHHHHHHHHHhhcccee
Confidence 467899999999999999999999999999999988888777776678899999999999 6666655532 499
Q ss_pred EEEEccCCCCC--------------CCCCCceeeehHHHHHHHHHHHH--------c-C-CCEEEEecccccccccCCCC
Q 022216 138 AVVCATGFQPG--------------WDLFAPWKVDNFGTVNLVEACRK--------R-G-VNRFILISSILVNGAAMGQI 193 (301)
Q Consensus 138 ~Vi~~Ag~~~~--------------~~~~~~~~~N~~g~~~l~~a~~~--------~-~-~~~iV~~SS~~~~~~~~~~~ 193 (301)
+.+||||+... +++...+++|+.|++|+++.... . | .+-||++.|.+++....++
T Consensus 86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq- 164 (260)
T KOG1199|consen 86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ- 164 (260)
T ss_pred eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch-
Confidence 99999997431 46778899999999999887521 1 1 2468888888877554442
Q ss_pred CCcchhhcchhhHHHHHHHHHHH-------HHHHcCCcEEEEecCcccCCCCCCcee-----eccccccccCCCCHHHHH
Q 022216 194 LNPAYIFLNVFGLTLIAKLQAEQ-------YIRKSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVA 261 (301)
Q Consensus 194 ~~~~~~~~~~~~~y~~sK~~~e~-------~~~~~~i~~~~irpg~v~~~~~~~~~~-----~~~~~~~~~~~v~~~Dva 261 (301)
..|..||.+.-- -+..-|||++.|.||.+.+|+...... +....+.+...-++.+-+
T Consensus 165 -----------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eya 233 (260)
T KOG1199|consen 165 -----------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYA 233 (260)
T ss_pred -----------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHH
Confidence 445566655421 123468999999999999997654321 111122222345788888
Q ss_pred HHHHHHhcCCCCCCcEEEeec
Q 022216 262 EVAVEALLHPESSYKVVEIIS 282 (301)
Q Consensus 262 ~~~~~~l~~~~~~~~~~~v~~ 282 (301)
..+-..+++|--.+++..+.+
T Consensus 234 hlvqaiienp~lngevir~dg 254 (260)
T KOG1199|consen 234 HLVQAIIENPYLNGEVIRFDG 254 (260)
T ss_pred HHHHHHHhCcccCCeEEEecc
Confidence 888777788876777666543
No 283
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.74 E-value=1.9e-16 Score=124.49 Aligned_cols=202 Identities=23% Similarity=0.292 Sum_probs=146.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~ 146 (301)
|+|.|.||||.+|+.++++++++|++|+++.|++++.... +++.+++.|+.| .+++.+.+.+ .|+||..-+..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----~~~~i~q~Difd-~~~~a~~l~g-~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----QGVTILQKDIFD-LTSLASDLAG-HDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----ccceeecccccC-hhhhHhhhcC-CceEEEeccCC
Confidence 6899999999999999999999999999999999987532 678899999999 8888999999 99999987654
Q ss_pred CCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHH--HHHH-HcCC
Q 022216 147 PGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE--QYIR-KSGI 223 (301)
Q Consensus 147 ~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e--~~~~-~~~i 223 (301)
..... .-.......+++..+..++.|++.++..+...-..+.. --..+.-|...|...+..+| +.++ +..+
T Consensus 74 ~~~~~----~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~r--LvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l 147 (211)
T COG2910 74 ASDND----ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTR--LVDTPDFPAEYKPEALAQAEFLDSLRAEKSL 147 (211)
T ss_pred CCChh----HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCce--eecCCCCchhHHHHHHHHHHHHHHHhhccCc
Confidence 22111 22345577889999998999999988764321111110 00111122334456666666 3343 4569
Q ss_pred cEEEEecCcccCCCC-CCceeeccccccc----cCCCCHHHHHHHHHHHhcCCCCCCcEEEee
Q 022216 224 NYTIIRPGGLRNEPP-TGNIIMETEDTLY----EGTISRDQVAEVAVEALLHPESSYKVVEII 281 (301)
Q Consensus 224 ~~~~irpg~v~~~~~-~~~~~~~~~~~~~----~~~v~~~Dva~~~~~~l~~~~~~~~~~~v~ 281 (301)
+|+.+.|..++-|.. ++.+...++.-.. .++|+.+|-|-+++..++.|....+.|.+.
T Consensus 148 ~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 148 DWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTVA 210 (211)
T ss_pred ceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence 999999999998854 3455554432222 258999999999999999998777777654
No 284
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.74 E-value=5.2e-17 Score=131.45 Aligned_cols=156 Identities=21% Similarity=0.175 Sum_probs=116.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc------cccCCCCeEEEEccCCCChHhHHHHhcC-----
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT------LSKDNPSLQIVKADVTEGSAKLSEAIGD----- 134 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 134 (301)
++++||||+|+||.+++++|+++|+ .|+++.|+....... ......++.++.+|+++ .+.+.+.+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVAD-RAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5799999999999999999999996 677778875443211 11134567889999998 6666555432
Q ss_pred -CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhh
Q 022216 135 -DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG 205 (301)
Q Consensus 135 -~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~ 205 (301)
++|+|||+||.... ++++..+++|+.++.++++++++.+.+++|++||....-.. ..+.
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~------------~~~~ 147 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN------------PGQA 147 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC------------CCch
Confidence 38999999986431 23456789999999999999988777899999997532111 1245
Q ss_pred HHHHHHHHHHHHHH---HcCCcEEEEecCcccC
Q 022216 206 LTLIAKLQAEQYIR---KSGINYTIIRPGGLRN 235 (301)
Q Consensus 206 ~y~~sK~~~e~~~~---~~~i~~~~irpg~v~~ 235 (301)
.|..+|...+.+.+ ..+++++.+.||.+.+
T Consensus 148 ~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~~ 180 (180)
T smart00822 148 NYAAANAFLDALAAHRRARGLPATSINWGAWAD 180 (180)
T ss_pred hhHHHHHHHHHHHHHHHhcCCceEEEeeccccC
Confidence 68889998887653 4789999999997653
No 285
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.72 E-value=6.2e-17 Score=139.14 Aligned_cols=190 Identities=19% Similarity=0.158 Sum_probs=128.0
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch--hhhccccCC----CCeEEEEccCCCChHhHH-------H
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTTLSKDN----PSLQIVKADVTEGSAKLS-------E 130 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~--~~~~~~~~~----~~~~~~~~Dl~~~~~~~~-------~ 130 (301)
+++|++|||||+++||++++++|+++|++|+++.|+... .+....... ..+.+..+|+++..+++. +
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999999988887654 222211122 367788899996233333 3
Q ss_pred HhcCCCCEEEEccCCCCC---------CCCCCceeeehHHHHHHHHHHHHcC-CCEEEEecccccccccCCCCCCcchhh
Q 022216 131 AIGDDSEAVVCATGFQPG---------WDLFAPWKVDNFGTVNLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIF 200 (301)
Q Consensus 131 ~~~~~~d~Vi~~Ag~~~~---------~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~ 200 (301)
.++. +|++|||||.... ++++.++++|+.|...+.+++...- .++||++||.... .....
T Consensus 83 ~~g~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~-------- 152 (251)
T COG1028 83 EFGR-IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG-------- 152 (251)
T ss_pred HcCC-CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC--------
Confidence 3445 9999999997431 3566788999999999888553221 1299999998643 21110
Q ss_pred cchhhHHHHHHHHHHHHH-------HHcCCcEEEEecCcccCCCCCCceeec-------cccccccCCCCHHHHHHHHHH
Q 022216 201 LNVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIME-------TEDTLYEGTISRDQVAEVAVE 266 (301)
Q Consensus 201 ~~~~~~y~~sK~~~e~~~-------~~~~i~~~~irpg~v~~~~~~~~~~~~-------~~~~~~~~~v~~~Dva~~~~~ 266 (301)
+..|..+|.+.+.+. ..+|++++.|.||.+.+++........ ........+..+.++++.+..
T Consensus 153 ---~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (251)
T COG1028 153 ---QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAF 229 (251)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 467888888886543 246899999999988877644221110 000011134567788888763
No 286
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.72 E-value=1.4e-17 Score=134.11 Aligned_cols=140 Identities=18% Similarity=0.280 Sum_probs=107.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeC--Cchhhhcc---ccCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRD--LDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~--~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
|+++||||+++||++++++|+++|. .|+++.|+ .+...++. .....++.++++|+++ .+++.+.+..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 6899999999999999999999965 67777777 33333332 2245889999999999 7666555432
Q ss_pred CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 135 DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
++|+||||||.... ++++.++++|+.+...+.+++...+.++||++||....- + ......
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---~---------~~~~~~ 147 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR---G---------SPGMSA 147 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS---S---------STTBHH
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc---C---------CCCChh
Confidence 49999999997653 245567899999999999999876668999999986432 1 123577
Q ss_pred HHHHHHHHHHHHH
Q 022216 207 TLIAKLQAEQYIR 219 (301)
Q Consensus 207 y~~sK~~~e~~~~ 219 (301)
|..+|.+.+.+.+
T Consensus 148 Y~askaal~~~~~ 160 (167)
T PF00106_consen 148 YSASKAALRGLTQ 160 (167)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8899999987765
No 287
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.66 E-value=2.1e-15 Score=128.39 Aligned_cols=193 Identities=20% Similarity=0.241 Sum_probs=137.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-----CCCCeEEEEccCCCChHhHHHHhcC------C
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD------D 135 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 135 (301)
.+|+|||++.+||..++.++..+|++|+++.|+..++.+.... ....+.+..+|+.| -+++...+++ .
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~-Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVID-YDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecccccc-HHHHHHHHhhhhhccCC
Confidence 5899999999999999999999999999999999888775543 11236688899988 6777666654 5
Q ss_pred CCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHH----HcC-CCEEEEecccccccccCCCCCCcchhhcc
Q 022216 136 SEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACR----KRG-VNRFILISSILVNGAAMGQILNPAYIFLN 202 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~ 202 (301)
+|.+|||||..-. ++.+..+++|..|+.|+++++. +.. .++|+.+||..+.- + ..
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~---~---------i~ 180 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML---G---------IY 180 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc---C---------cc
Confidence 8999999996432 2345678999999999998873 222 35999999976321 1 12
Q ss_pred hhhHHHHHHHHHHHH-------HHHcCCcEEEEecCcccCCCCCCceeeccccc----cccCCCCHHHHHHHHHHHhcCC
Q 022216 203 VFGLTLIAKLQAEQY-------IRKSGINYTIIRPGGLRNEPPTGNIIMETEDT----LYEGTISRDQVAEVAVEALLHP 271 (301)
Q Consensus 203 ~~~~y~~sK~~~e~~-------~~~~~i~~~~irpg~v~~~~~~~~~~~~~~~~----~~~~~v~~~Dva~~~~~~l~~~ 271 (301)
.|+.|..+|.+...+ +..+|+.++..-|+.+.+|+....-...+... -..+.+..+++|.+++.=+.+.
T Consensus 181 GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 181 GYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred cccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhhc
Confidence 244455555554322 23479999999999999996544332222211 1134578899999998777655
Q ss_pred C
Q 022216 272 E 272 (301)
Q Consensus 272 ~ 272 (301)
.
T Consensus 261 ~ 261 (331)
T KOG1210|consen 261 N 261 (331)
T ss_pred C
Confidence 3
No 288
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.64 E-value=3.6e-15 Score=127.16 Aligned_cols=164 Identities=20% Similarity=0.199 Sum_probs=124.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc----CCCCeEEEEccCCCCh---HhHHHHhcC-CCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGS---AKLSEAIGD-DSE 137 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~---~~~~~~~~~-~~d 137 (301)
++.+.|||||.+||++.+++|+++|.+|+++.|++++++....+ ....+.++..|.+++. +.+.+.+.+ ++.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 58999999999999999999999999999999999998876543 3466889999999832 335555555 577
Q ss_pred EEEEccCCCCC----------CCCCCceeeehHHHHHHHHHH----HHcCCCEEEEecccccccccCCCCCCcchhhcch
Q 022216 138 AVVCATGFQPG----------WDLFAPWKVDNFGTVNLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV 203 (301)
Q Consensus 138 ~Vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~ 203 (301)
++|||+|...+ +.....+.+|+.++..+.+.. .+.+.+-||++||.+. . .+...
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag---~---------~p~p~ 196 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAG---L---------IPTPL 196 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccc---c---------ccChh
Confidence 99999997652 134567899999977777665 4445678999999851 1 12233
Q ss_pred hhHHHHHHHHHHHH-------HHHcCCcEEEEecCcccCCCCCCc
Q 022216 204 FGLTLIAKLQAEQY-------IRKSGINYTIIRPGGLRNEPPTGN 241 (301)
Q Consensus 204 ~~~y~~sK~~~e~~-------~~~~~i~~~~irpg~v~~~~~~~~ 241 (301)
++.|..+|...+.+ .+.+||.+-.+-|..|.+++....
T Consensus 197 ~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~ 241 (312)
T KOG1014|consen 197 LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR 241 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence 67788888865532 345799999999999999875443
No 289
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.60 E-value=5.9e-15 Score=157.83 Aligned_cols=162 Identities=12% Similarity=0.040 Sum_probs=120.9
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEeCCch--------------h--------------------------
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDK--------------A-------------------------- 103 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~~r~~~~--------------~-------------------------- 103 (301)
+++++|||||++|||.+++++|+++ |++|++++|+... +
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4789999999999999999999998 6999999998210 0
Q ss_pred -------hh---ccccCCCCeEEEEccCCCChHhHHHHhcC-----CCCEEEEccCCCCC--------CCCCCceeeehH
Q 022216 104 -------KT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD-----DSEAVVCATGFQPG--------WDLFAPWKVDNF 160 (301)
Q Consensus 104 -------~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~ 160 (301)
.+ .....+..+.++.+|++| .+++.+++.. ++|.||||||+..+ ++|...+++|+.
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD-~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTN-SVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 00 001123568899999999 7666665543 49999999997542 356778999999
Q ss_pred HHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHH----H-cCCcEEEEecCcccC
Q 022216 161 GTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR----K-SGINYTIIRPGGLRN 235 (301)
Q Consensus 161 g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~-~~i~~~~irpg~v~~ 235 (301)
|++++++++.....++||++||+..+-.. + ....|..+|...+.+.+ + .+++++.|.||.+.|
T Consensus 2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~---~---------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2155 GLLSLLAALNAENIKLLALFSSAAGFYGN---T---------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred HHHHHHHHHHHhCCCeEEEEechhhcCCC---C---------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 99999999987766789999998743211 1 13557778877665442 2 368999999999888
Q ss_pred CCCC
Q 022216 236 EPPT 239 (301)
Q Consensus 236 ~~~~ 239 (301)
++..
T Consensus 2223 gm~~ 2226 (2582)
T TIGR02813 2223 GMVN 2226 (2582)
T ss_pred Cccc
Confidence 7643
No 290
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.59 E-value=2.9e-14 Score=111.40 Aligned_cols=159 Identities=23% Similarity=0.278 Sum_probs=127.8
Q ss_pred hhcccCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCE
Q 022216 61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA 138 (301)
Q Consensus 61 ~~~~~~~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 138 (301)
++.|++|.++|.||||-.|+.+++.+++++ .+|+++.|+....+ +....+.....|... -+.....+.+ +|+
T Consensus 13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~----at~k~v~q~~vDf~K-l~~~a~~~qg-~dV 86 (238)
T KOG4039|consen 13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP----ATDKVVAQVEVDFSK-LSQLATNEQG-PDV 86 (238)
T ss_pred HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc----cccceeeeEEechHH-HHHHHhhhcC-Cce
Confidence 377889999999999999999999999998 48999999852211 134677788888887 6778888888 999
Q ss_pred EEEccCCCCC-CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHH
Q 022216 139 VVCATGFQPG-WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY 217 (301)
Q Consensus 139 Vi~~Ag~~~~-~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 217 (301)
.|.|-|.... ...+.+++++.+-...+.+++++.|+++|+.+||..+-.. ..-.|...|...|+-
T Consensus 87 ~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s--------------SrFlY~k~KGEvE~~ 152 (238)
T KOG4039|consen 87 LFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS--------------SRFLYMKMKGEVERD 152 (238)
T ss_pred EEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc--------------cceeeeeccchhhhh
Confidence 9999886553 3467788999999999999999999999999999853211 123577888889887
Q ss_pred HHHcCC-cEEEEecCcccCCCCC
Q 022216 218 IRKSGI-NYTIIRPGGLRNEPPT 239 (301)
Q Consensus 218 ~~~~~i-~~~~irpg~v~~~~~~ 239 (301)
+.+.++ +++++|||.+.+....
T Consensus 153 v~eL~F~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 153 VIELDFKHIIILRPGPLLGERTE 175 (238)
T ss_pred hhhccccEEEEecCcceeccccc
Confidence 777776 5888999999887543
No 291
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=99.53 E-value=4.2e-14 Score=115.03 Aligned_cols=194 Identities=21% Similarity=0.173 Sum_probs=144.9
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
++-.+.++.|++|+.|+++++.....|+.|..+.|+..+ +........+.+.++|... ..-+...+.+ +..++-++
T Consensus 50 ve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~sw~~~vswh~gnsfs-sn~~k~~l~g-~t~v~e~~ 125 (283)
T KOG4288|consen 50 VEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSSWPTYVSWHRGNSFS-SNPNKLKLSG-PTFVYEMM 125 (283)
T ss_pred hhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhCCCcccchhhccccc-cCcchhhhcC-CcccHHHh
Confidence 334578999999999999999999999999999998653 3333356788889999876 4556667777 88888888
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHH-HHcC
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI-RKSG 222 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-~~~~ 222 (301)
|-.. ....+.++|-....+-++++.+.|+++|+|+|... ||. ++.- ...|..+|.++|..+ ..++
T Consensus 126 ggfg--n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~----------~~~i-~rGY~~gKR~AE~Ell~~~~ 191 (283)
T KOG4288|consen 126 GGFG--NIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL----------PPLI-PRGYIEGKREAEAELLKKFR 191 (283)
T ss_pred cCcc--chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC----------CCcc-chhhhccchHHHHHHHHhcC
Confidence 6443 23345578888888999999999999999998853 111 1111 146889999999655 4578
Q ss_pred CcEEEEecCcccCCCCCCcee-----------------------eccccccccCCCCHHHHHHHHHHHhcCCCCCC
Q 022216 223 INYTIIRPGGLRNEPPTGNII-----------------------METEDTLYEGTISRDQVAEVAVEALLHPESSY 275 (301)
Q Consensus 223 i~~~~irpg~v~~~~~~~~~~-----------------------~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~~ 275 (301)
.+-+++|||++||....+.+. ++.......+++.+++||.+++.++.+|...|
T Consensus 192 ~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~G 267 (283)
T KOG4288|consen 192 FRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKG 267 (283)
T ss_pred CCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCc
Confidence 999999999999974333221 12223344567899999999999999998653
No 292
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.50 E-value=1.8e-12 Score=106.72 Aligned_cols=223 Identities=17% Similarity=0.113 Sum_probs=157.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhh-----hcccc----CCCCeEEEEccCCCChHhHHHHhcC-C
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK-----TTLSK----DNPSLQIVKADVTEGSAKLSEAIGD-D 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~-----~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~-~ 135 (301)
.|+.||||-+|.=|+++++.|+..|++|.++.|+.+... -+... .+.......+|++| ...+.+.+.. +
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTD-ss~L~k~I~~ik 106 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTD-SSCLIKLISTIK 106 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccc-hHHHHHHHhccC
Confidence 468999999999999999999999999999999876532 12211 34678889999999 7888888877 7
Q ss_pred CCEEEEccCCCCC----CCCCCceeeehHHHHHHHHHHHHcCC---CEEEEecccccccccCCCCCCcchhhcchhhHHH
Q 022216 136 SEAVVCATGFQPG----WDLFAPWKVDNFGTVNLVEACRKRGV---NRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (301)
Q Consensus 136 ~d~Vi~~Ag~~~~----~~~~~~~~~N~~g~~~l~~a~~~~~~---~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~ 208 (301)
++-|+|.|+...- +-++.+-+++..|+.+|++|.+.++. -||--.||.-.||.....|. .+..|.-|.+.|+
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQ-sE~TPFyPRSPYa 185 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQ-SETTPFYPRSPYA 185 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCc-ccCCCCCCCChhH
Confidence 8999999986542 22344568899999999999988763 26777888888987766553 3345667788999
Q ss_pred HHHHHHHHHH----HHcCC-cEEEEecCcccCCCCCCce--------------------eeccccccccCCCCHHHHHHH
Q 022216 209 IAKLQAEQYI----RKSGI-NYTIIRPGGLRNEPPTGNI--------------------IMETEDTLYEGTISRDQVAEV 263 (301)
Q Consensus 209 ~sK~~~e~~~----~~~~i-~~~~irpg~v~~~~~~~~~--------------------~~~~~~~~~~~~v~~~Dva~~ 263 (301)
.+|..+-.+. +.+++ .++-|- .+-..|.....+ .++. -....+|-+..|-.++
T Consensus 186 ~aKmy~~WivvNyREAYnmfAcNGIL-FNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGN-L~a~RDWGhA~dYVEA 263 (376)
T KOG1372|consen 186 AAKMYGYWIVVNYREAYNMFACNGIL-FNHESPRRGENFVTRKITRSVAKISLGQQEKIELGN-LSALRDWGHAGDYVEA 263 (376)
T ss_pred HhhhhheEEEEEhHHhhcceeeccEe-ecCCCCccccchhhHHHHHHHHHhhhcceeeEEecc-hhhhcccchhHHHHHH
Confidence 9998875322 23442 222222 122223222211 1111 1222468889999999
Q ss_pred HHHHhcCCCCCCcEEEeecCCCCCCcCHHHHHHH
Q 022216 264 AVEALLHPESSYKVVEIISRVDAPKRSYEDLFGS 297 (301)
Q Consensus 264 ~~~~l~~~~~~~~~~~v~~~~~~~~~s~~e~~~~ 297 (301)
+...|+++.. ..|-|..+ +..+++|+++.
T Consensus 264 MW~mLQ~d~P--dDfViATg---e~hsVrEF~~~ 292 (376)
T KOG1372|consen 264 MWLMLQQDSP--DDFVIATG---EQHSVREFCNL 292 (376)
T ss_pred HHHHHhcCCC--CceEEecC---CcccHHHHHHH
Confidence 9888887753 35888885 99999999875
No 293
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.49 E-value=1.9e-13 Score=111.70 Aligned_cols=153 Identities=23% Similarity=0.241 Sum_probs=101.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCc-h--hhh---ccccCCCCeEEEEccCCCChHhHHHHhcC------
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD-K--AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD------ 134 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~-~--~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 134 (301)
++|||||.|+||..+++.|+++|. +|+++.|+.. . ..+ ........+.++.+|++| .+++.+++.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTD-PEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTS-HHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccC-HHHHHHHHHHHHhccC
Confidence 689999999999999999999985 8999999832 1 111 112246789999999999 8888887754
Q ss_pred CCCEEEEccCCCCCC--------CCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCCCCCcchhhcchhhH
Q 022216 135 DSEAVVCATGFQPGW--------DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL 206 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~~--------~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 206 (301)
+++.|||+||...+. ++...+..-+.|+.+|.++......+.+|.+||++..- +.+.. ..
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~---G~~gq---------~~ 148 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLL---GGPGQ---------SA 148 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHT---T-TTB---------HH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhc---cCcch---------Hh
Confidence 589999999975432 23334566788899999999888888999999987431 22212 34
Q ss_pred HHHHHHHHHHHH---HHcCCcEEEEecCcc
Q 022216 207 TLIAKLQAEQYI---RKSGINYTIIRPGGL 233 (301)
Q Consensus 207 y~~sK~~~e~~~---~~~~i~~~~irpg~v 233 (301)
|.......+.+. +..|.++..|.-|..
T Consensus 149 YaaAN~~lda~a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 149 YAAANAFLDALARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence 455555555443 347888888887643
No 294
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.48 E-value=4.3e-14 Score=115.01 Aligned_cols=193 Identities=17% Similarity=0.136 Sum_probs=127.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEE--EeCCchhhhccccCCCCeEEEEccCCCChHh---HHHHhcC---CCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG--VRDLDKAKTTLSKDNPSLQIVKADVTEGSAK---LSEAIGD---DSE 137 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~---~~~~~~~---~~d 137 (301)
++.+|+||++.+||..++..+.+.+.+.... .|.....+.+............+|++. ... +.++... +.|
T Consensus 6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e-~~~l~al~e~~r~k~gkr~ 84 (253)
T KOG1204|consen 6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITE-EQLLGALREAPRKKGGKRD 84 (253)
T ss_pred ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHH-HHHHHHHHhhhhhcCCcee
Confidence 5789999999999999999999888654443 444333333322223344445566665 322 2222221 589
Q ss_pred EEEEccCCCCC-----------CCCCCceeeehHHHHHHHHHHHH----cC-CCEEEEecccccccccCCCCCCcchhhc
Q 022216 138 AVVCATGFQPG-----------WDLFAPWKVDNFGTVNLVEACRK----RG-VNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 138 ~Vi~~Ag~~~~-----------~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
+||||||...+ .+|..+|+.|+.+...+.+.+.+ .. .+.+|++||.+. ..+.
T Consensus 85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aa------------v~p~ 152 (253)
T KOG1204|consen 85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAA------------VRPF 152 (253)
T ss_pred EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhh------------hccc
Confidence 99999997542 24778999999998887776632 22 268999999753 2345
Q ss_pred chhhHHHHHHHHHHHHHH-----Hc-CCcEEEEecCcccCCCCCCcee---eccc-------cccccCCCCHHHHHHHHH
Q 022216 202 NVFGLTLIAKLQAEQYIR-----KS-GINYTIIRPGGLRNEPPTGNII---METE-------DTLYEGTISRDQVAEVAV 265 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~-----~~-~i~~~~irpg~v~~~~~~~~~~---~~~~-------~~~~~~~v~~~Dva~~~~ 265 (301)
+.|+.|..+|++.+.+++ ++ ++++..++||.+.|++...... +.+. .......+++.+.|..+.
T Consensus 153 ~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~ 232 (253)
T KOG1204|consen 153 SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLA 232 (253)
T ss_pred cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHH
Confidence 668999999999998764 43 8999999999999987432211 1110 000123567788888887
Q ss_pred HHhcCC
Q 022216 266 EALLHP 271 (301)
Q Consensus 266 ~~l~~~ 271 (301)
.+++..
T Consensus 233 ~L~e~~ 238 (253)
T KOG1204|consen 233 KLLEKG 238 (253)
T ss_pred HHHHhc
Confidence 777654
No 295
>PRK06720 hypothetical protein; Provisional
Probab=99.43 E-value=1.4e-12 Score=105.22 Aligned_cols=122 Identities=12% Similarity=0.035 Sum_probs=84.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccc---cCCCCeEEEEccCCCChHhHHHH-------
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEA------- 131 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~------- 131 (301)
+.+++|+++||||+++||+++++.|+++|++|++++|+.+..++... .......++.+|+++ .+++.+.
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~v~~~~~~ 90 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK-QGDWQRVISITLNA 90 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999988665433211 123457788999999 6555543
Q ss_pred hcCCCCEEEEccCCCCCC------CCCCceeeehHHHHHHHHHH----HHc-------CCCEEEEeccccc
Q 022216 132 IGDDSEAVVCATGFQPGW------DLFAPWKVDNFGTVNLVEAC----RKR-------GVNRFILISSILV 185 (301)
Q Consensus 132 ~~~~~d~Vi~~Ag~~~~~------~~~~~~~~N~~g~~~l~~a~----~~~-------~~~~iV~~SS~~~ 185 (301)
+++ +|++|||||..... +....-.+|+.++....+.+ ++. +.+||-.+||.++
T Consensus 91 ~G~-iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (169)
T PRK06720 91 FSR-IDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ 160 (169)
T ss_pred cCC-CCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence 345 99999999964321 10011245666655554444 222 3478888988753
No 296
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.37 E-value=7.1e-12 Score=102.32 Aligned_cols=209 Identities=17% Similarity=0.199 Sum_probs=128.4
Q ss_pred cccCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEeCCchhhh----ccccCCCCeEEEEccCCCChHhHHHHhcC--
Q 022216 63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGD-- 134 (301)
Q Consensus 63 ~~~~~~vlVtGat--G~iG~~~~~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-- 134 (301)
.++||++||+|-. ..|+..|++.|.++|+++......+ ++++ +.+ ......+++||+++ ++++.+.|.+
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~-~~~s~~v~~cDV~~-d~~i~~~f~~i~ 79 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAE-ELGSDLVLPCDVTN-DESIDALFATIK 79 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHh-hccCCeEEecCCCC-HHHHHHHHHHHH
Confidence 4679999999964 6799999999999999999876654 3322 221 22345679999999 7666666543
Q ss_pred ----CCCEEEEccCCCCCCCC-CCceeeehH--------HHHHHHHHHHHc-----CCCEEEEecccccccccCCCCCCc
Q 022216 135 ----DSEAVVCATGFQPGWDL-FAPWKVDNF--------GTVNLVEACRKR-----GVNRFILISSILVNGAAMGQILNP 196 (301)
Q Consensus 135 ----~~d~Vi~~Ag~~~~~~~-~~~~~~N~~--------g~~~l~~a~~~~-----~~~~iV~~SS~~~~~~~~~~~~~~ 196 (301)
++|.|||+.|..+.++. -.++++.-. +++.++..++.. +.+.+|.++-.. ...
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlg---s~r------ 150 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLG---SER------ 150 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEecc---cee------
Confidence 59999999997663211 112222222 233344333322 225666654431 111
Q ss_pred chhhcchhhHHHHHHHHHHHHHH-------HcCCcEEEEecCcccCCCCCCc-----ee-eccccccccCCCCHHHHHHH
Q 022216 197 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN-----II-METEDTLYEGTISRDQVAEV 263 (301)
Q Consensus 197 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~irpg~v~~~~~~~~-----~~-~~~~~~~~~~~v~~~Dva~~ 263 (301)
..+.|+..+..|.+.|.-.+ ..|||+|.|.-|.+.|=-..+- +. ......+....++.+||++.
T Consensus 151 ---~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~t 227 (259)
T COG0623 151 ---VVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNT 227 (259)
T ss_pred ---ecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhh
Confidence 11235677889999985332 3689999999999887422211 11 11112233456889999999
Q ss_pred HHHHhcCCCCCCcEEEeecCCCCC
Q 022216 264 AVEALLHPESSYKVVEIISRVDAP 287 (301)
Q Consensus 264 ~~~~l~~~~~~~~~~~v~~~~~~~ 287 (301)
. .+|.++-+.+.+.++...|.+.
T Consensus 228 A-~fLlSdLssgiTGei~yVD~G~ 250 (259)
T COG0623 228 A-AFLLSDLSSGITGEIIYVDSGY 250 (259)
T ss_pred H-HHHhcchhcccccceEEEcCCc
Confidence 8 5666676666665555544343
No 297
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.31 E-value=6.1e-12 Score=103.96 Aligned_cols=170 Identities=18% Similarity=0.216 Sum_probs=120.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC-----eEEEEEeCCchhhhccc-------cCCCCeEEEEccCCCChHhHHHHhc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF-----AVKAGVRDLDKAKTTLS-------KDNPSLQIVKADVTEGSAKLSEAIG 133 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~-----~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~ 133 (301)
.|++||||++++||.+++++|++... ++.+..|+-++.++... +....++++..|++| ..++..+.+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sN-m~Sv~~A~~ 81 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSN-MQSVFRASK 81 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhh-HHHHHHHHH
Confidence 47899999999999999999998753 46667898887765322 234678999999999 766666554
Q ss_pred C------CCCEEEEccCCCCC-----------------------------------CCCCCceeeehHHHHHHHHHHHHc
Q 022216 134 D------DSEAVVCATGFQPG-----------------------------------WDLFAPWKVDNFGTVNLVEACRKR 172 (301)
Q Consensus 134 ~------~~d~Vi~~Ag~~~~-----------------------------------~~~~~~~~~N~~g~~~l~~a~~~~ 172 (301)
+ ++|.|+.|||..+- ++....|++|+.|.+.+++-....
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 3 49999999996431 344567899999999998887432
Q ss_pred ---C-CCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHH-------HHcCCcEEEEecCcccCCCCC
Q 022216 173 ---G-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPT 239 (301)
Q Consensus 173 ---~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-------~~~~i~~~~irpg~v~~~~~~ 239 (301)
+ ..++|++||..+-... ...++..-.+.-..|..||.+.+-+- ...|+.-.++.||...+.+..
T Consensus 162 l~~~~~~~lvwtSS~~a~kk~---lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~ 236 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMARKKN---LSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFS 236 (341)
T ss_pred hhcCCCCeEEEEeeccccccc---CCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhh
Confidence 2 2489999998643222 11233333444456778888876321 135788889999987776533
No 298
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.28 E-value=1.1e-10 Score=94.60 Aligned_cols=156 Identities=17% Similarity=0.210 Sum_probs=109.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcC------CCCE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------DSEA 138 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 138 (301)
|+++||||+|++|. +++.|+++|++|+++.|+++..+.+... ....+.++.+|++| .+++.+.+.+ ++|+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d-~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHD-DDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCeE
Confidence 57999999976665 9999999999999999987665543321 23468889999999 7777766643 4777
Q ss_pred EEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCC----EEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHH
Q 022216 139 VVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVN----RFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 214 (301)
Q Consensus 139 Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~----~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 214 (301)
+|+.+ ++.++.++.++|++.+++ ++|++=...+ .+ .+...
T Consensus 79 lv~~v--------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~-----~~-----------------~~~~~ 122 (177)
T PRK08309 79 AVAWI--------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAA-----SD-----------------PRIPS 122 (177)
T ss_pred EEEec--------------cccchhhHHHHHHHHccCCCCceEEEEeCCcC-----Cc-----------------hhhhh
Confidence 77654 455689999999999988 8887643221 00 02223
Q ss_pred HHHHHHcCCcEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcCCCCC
Q 022216 215 EQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESS 274 (301)
Q Consensus 215 e~~~~~~~i~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~ 274 (301)
+... .....+.=|..|++.... ...|++-+++++.++.+++++...
T Consensus 123 ~~~~-~~~~~~~~i~lgf~~~~~-------------~~rwlt~~ei~~gv~~~~~~~~~~ 168 (177)
T PRK08309 123 EKIG-PARCSYRRVILGFVLEDT-------------YSRWLTHEEISDGVIKAIESDADE 168 (177)
T ss_pred hhhh-hcCCceEEEEEeEEEeCC-------------ccccCchHHHHHHHHHHHhcCCCe
Confidence 3323 245567777777765431 125899999999999999877643
No 299
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.19 E-value=1e-09 Score=98.06 Aligned_cols=160 Identities=16% Similarity=0.093 Sum_probs=97.7
Q ss_pred cCCeEEEEcCCchHHHH--HHHHHHHCCCeEEEEEeCCch---------------hhhccccCCCCeEEEEccCCCChHh
Q 022216 65 KQKKIFVAGATGSSGKR--IVEQLLAKGFAVKAGVRDLDK---------------AKTTLSKDNPSLQIVKADVTEGSAK 127 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~--~~~~l~~~G~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~Dl~~~~~~ 127 (301)
.+|++||||+++++|.+ ++++| +.|++|+++.+..+. ..+.....+..+..+.+|+++ ++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-DEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHH
Confidence 47999999999999999 89999 999999888753321 111222223456788999999 655
Q ss_pred HHHHhcC------CCCEEEEccCCCCCCCCC------------------Ccee----------------------eehHH
Q 022216 128 LSEAIGD------DSEAVVCATGFQPGWDLF------------------APWK----------------------VDNFG 161 (301)
Q Consensus 128 ~~~~~~~------~~d~Vi~~Ag~~~~~~~~------------------~~~~----------------------~N~~g 161 (301)
+.+.+.. ++|+||||+|.....++. .+++ +++.|
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg 197 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG 197 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence 5444322 499999999865332210 0000 11122
Q ss_pred H---HHHHHHHHHcC----CCEEEEecccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHH-------HcCCcEEE
Q 022216 162 T---VNLVEACRKRG----VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTI 227 (301)
Q Consensus 162 ~---~~l~~a~~~~~----~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~ 227 (301)
. ..-+++....+ ..++|-.|... .... .+.|. -+.-+..|...|...+ ..|+++++
T Consensus 198 gedw~~Wi~al~~a~lla~g~~~va~TY~G---~~~t---~p~Y~----~g~mG~AKa~LE~~~r~La~~L~~~giran~ 267 (398)
T PRK13656 198 GEDWELWIDALDEAGVLAEGAKTVAYSYIG---PELT---HPIYW----DGTIGKAKKDLDRTALALNEKLAAKGGDAYV 267 (398)
T ss_pred cchHHHHHHHHHhcccccCCcEEEEEecCC---ccee---ecccC----CchHHHHHHHHHHHHHHHHHHhhhcCCEEEE
Confidence 1 12233433333 24677776653 1111 11110 1355788888886443 35899999
Q ss_pred EecCcccCC
Q 022216 228 IRPGGLRNE 236 (301)
Q Consensus 228 irpg~v~~~ 236 (301)
+..|.+.|.
T Consensus 268 i~~g~~~T~ 276 (398)
T PRK13656 268 SVLKAVVTQ 276 (398)
T ss_pred EecCcccch
Confidence 999999886
No 300
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.99 E-value=2.1e-09 Score=94.99 Aligned_cols=168 Identities=14% Similarity=0.055 Sum_probs=108.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
++++|+|+|++|.||+.++..|+..+ .+++++++.....+. ..-.+........+.+| ...+.+.+++ .|+||++
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a-~Dl~~~~~~~~v~~~td-~~~~~~~l~g-aDvVVit 83 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVA-ADLSHIDTPAKVTGYAD-GELWEKALRG-ADLVLIC 83 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccc-cchhhcCcCceEEEecC-CCchHHHhCC-CCEEEEC
Confidence 57899999999999999999998665 588888883211111 00011111234456666 4556788999 9999999
Q ss_pred cCCCCC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCC----CCCcchhhcchhhHHHHHHHH---
Q 022216 143 TGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQ----ILNPAYIFLNVFGLTLIAKLQ--- 213 (301)
Q Consensus 143 Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~----~~~~~~~~~~~~~~y~~sK~~--- 213 (301)
||.... .++...+..|+..+.++++++++++++++|+++|.-+..-..-. .....+ ++-..||.+-+.
T Consensus 84 aG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~---p~~~viG~g~LDs~R 160 (321)
T PTZ00325 84 AGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVY---DPRKLFGVTTLDVVR 160 (321)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCC---ChhheeechhHHHHH
Confidence 997543 45667789999999999999999999999999996542110000 001111 122233333111
Q ss_pred HHHHH-HHcCCcEEEEecCcccCCCCC
Q 022216 214 AEQYI-RKSGINYTIIRPGGLRNEPPT 239 (301)
Q Consensus 214 ~e~~~-~~~~i~~~~irpg~v~~~~~~ 239 (301)
...++ +..+++...|+ +++.|+...
T Consensus 161 ~r~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 161 ARKFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred HHHHHHHHhCcChhheE-EEEEeecCC
Confidence 11222 34678877787 888887655
No 301
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.97 E-value=3.6e-09 Score=94.86 Aligned_cols=97 Identities=24% Similarity=0.324 Sum_probs=80.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
+|+|||.|+ |+||+.++..|+++| .+|++.+|+.++..+.......+++.++.|+.| .+++.+++++ .|+|||++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~~-~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIKD-FDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHhc-CCEEEEeCC
Confidence 478999999 999999999999999 899999999999888765455689999999999 8999999999 899999996
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEe
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILI 180 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~ 180 (301)
... ...++++|.+.|+ .+|-+
T Consensus 78 ~~~--------------~~~i~ka~i~~gv-~yvDt 98 (389)
T COG1748 78 PFV--------------DLTILKACIKTGV-DYVDT 98 (389)
T ss_pred chh--------------hHHHHHHHHHhCC-CEEEc
Confidence 432 2456777776664 34443
No 302
>PLN00106 malate dehydrogenase
Probab=98.89 E-value=8.1e-09 Score=91.38 Aligned_cols=115 Identities=15% Similarity=0.090 Sum_probs=85.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
.++|+|||++|.||..++..|+..+. +++++++++...+ ...-.+........++++ .+++.+.+++ .|+|||+|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~-a~Dl~~~~~~~~i~~~~~-~~d~~~~l~~-aDiVVitA 94 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV-AADVSHINTPAQVRGFLG-DDQLGDALKG-ADLVIIPA 94 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee-EchhhhCCcCceEEEEeC-CCCHHHHcCC-CCEEEEeC
Confidence 47999999999999999999997764 7888888762111 110011111223345544 4568889999 99999999
Q ss_pred CCCCC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 144 GFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 144 g~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
|.... .++...+..|...+.++.+.+++++...+|+++|-
T Consensus 95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSN 136 (323)
T PLN00106 95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISN 136 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 97543 46677789999999999999999998888888885
No 303
>PRK09620 hypothetical protein; Provisional
Probab=98.83 E-value=1.4e-08 Score=85.73 Aligned_cols=185 Identities=15% Similarity=0.149 Sum_probs=101.4
Q ss_pred ccCCeEEEEcCC----------------chHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHh
Q 022216 64 VKQKKIFVAGAT----------------GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127 (301)
Q Consensus 64 ~~~~~vlVtGat----------------G~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 127 (301)
++||+||||+|. |++|++++++|+++|++|+++++.......... .......+..|... .+.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~-~~~~~~~V~s~~d~-~~~ 78 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN-NQLELHPFEGIIDL-QDK 78 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC-CceeEEEEecHHHH-HHH
Confidence 368999999886 999999999999999999988764321111110 12234455654433 356
Q ss_pred HHHHhcC-CCCEEEEccCCCCC---C-------------CCC--CceeeehHHHHHHHHHHHHcCCCEEEEecccccccc
Q 022216 128 LSEAIGD-DSEAVVCATGFQPG---W-------------DLF--APWKVDNFGTVNLVEACRKRGVNRFILISSILVNGA 188 (301)
Q Consensus 128 ~~~~~~~-~~d~Vi~~Ag~~~~---~-------------~~~--~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~ 188 (301)
+.+.+.. ++|+|||+|++... . ... ..+...+.-+-.++..+++...+ -+.++-....+
T Consensus 79 l~~~~~~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~Ki~~~~~~~l~L~~~pdIl~~l~~~~~~-~~~vGFkaEt~- 156 (229)
T PRK09620 79 MKSIITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKISSDIAPIIHFQKAPKVLKQIKQWDPE-TVLVGFKLESD- 156 (229)
T ss_pred HHHHhcccCCCEEEECccccceecccccccccccccccCCCcCCCCCeEEEEECcHHHHHHHhhCCC-CEEEEEEeccC-
Confidence 7777753 49999999997431 0 001 11223444455666666554322 23333322100
Q ss_pred cCCCCCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEEEEecC-cccCCCCCCceeeccccccccCCCCHHHHHHHHHHH
Q 022216 189 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG-GLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEA 267 (301)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~irpg-~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~ 267 (301)
. .++ . .-+ .+.+-+.+++.++++...- ..+|... ..+.+....... ...+=.++|..++..
T Consensus 157 ---~--~~~-------~---l~~-~A~~kl~~k~~D~ivaN~~~~~~g~~~-~~~ii~~~~~~~-~~~~K~~iA~~i~~~ 218 (229)
T PRK09620 157 ---V--NEE-------E---LFE-RAKNRMEEAKASVMIANSPHSLYSRGA-MHYVIGQDGKGQ-LCNGKDETAKEIVKR 218 (229)
T ss_pred ---C--CHH-------H---HHH-HHHHHHHHcCCCEEEECCcccccCCCc-EEEEEeCCCccc-cCCCHHHHHHHHHHH
Confidence 0 000 0 111 2333355688888876542 2344333 233333332222 345678899888877
Q ss_pred hcC
Q 022216 268 LLH 270 (301)
Q Consensus 268 l~~ 270 (301)
+.+
T Consensus 219 i~~ 221 (229)
T PRK09620 219 LEV 221 (229)
T ss_pred HHH
Confidence 643
No 304
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.83 E-value=2.8e-07 Score=78.03 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=52.2
Q ss_pred eEEEE-cCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC-hHhHHHHhcCCCCEEEEccCC
Q 022216 68 KIFVA-GATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGDDSEAVVCATGF 145 (301)
Q Consensus 68 ~vlVt-GatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~d~Vi~~Ag~ 145 (301)
+=.|| .+||++|++++++|+++|++|+++.|+..... . ...++.++.++-.+. .+.+.+.+++ +|+||||||+
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~---~~~~v~~i~v~s~~~m~~~l~~~~~~-~DivIh~AAv 91 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-E---PHPNLSIIEIENVDDLLETLEPLVKD-HDVLIHSMAV 91 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-C---CCCCeEEEEEecHHHHHHHHHHHhcC-CCEEEeCCcc
Confidence 44455 56788999999999999999999987643211 0 124566666544331 1456667777 9999999997
Q ss_pred CC
Q 022216 146 QP 147 (301)
Q Consensus 146 ~~ 147 (301)
..
T Consensus 92 sd 93 (229)
T PRK06732 92 SD 93 (229)
T ss_pred CC
Confidence 54
No 305
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.79 E-value=2.8e-08 Score=88.46 Aligned_cols=115 Identities=10% Similarity=0.037 Sum_probs=78.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCC-------CeEEEEEeCCch--hhhccccCCCCeEEEEccCCCChHhHHHHhcCCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKG-------FAVKAGVRDLDK--AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDS 136 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 136 (301)
..+|+||||+|+||++++..|+..+ .+|+++++++.. ++....+...-......|+.. ...+.+.+++ +
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~-~~~~~~~l~~-a 79 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA-TTDPEEAFKD-V 79 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee-cCCHHHHhCC-C
Confidence 3579999999999999999999854 589999986532 221111011111122335544 3567788899 9
Q ss_pred CEEEEccCCCCC--CCCCCceeeehHHHHHHHHHHHHcC--CCEEEEecc
Q 022216 137 EAVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRG--VNRFILISS 182 (301)
Q Consensus 137 d~Vi~~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iV~~SS 182 (301)
|+|||+||.... .+....++.|+.-...+.+.++++. -..+|.+|.
T Consensus 80 DiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 80 DVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred CEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 999999997543 3446678899998899988888873 245666665
No 306
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=98.79 E-value=3.4e-08 Score=80.79 Aligned_cols=214 Identities=14% Similarity=0.098 Sum_probs=127.8
Q ss_pred CCeEEEEcCCchHHHHHHH-----HHHHCC----CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCC
Q 022216 66 QKKIFVAGATGSSGKRIVE-----QLLAKG----FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDS 136 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~-----~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 136 (301)
++..++-+++|+|+..+.. ++-..+ |.|+++.|.+.+... ++-+.|..--+-++ ... +
T Consensus 12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri---------tw~el~~~Gip~sc---~a~-v 78 (315)
T KOG3019|consen 12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI---------TWPELDFPGIPISC---VAG-V 78 (315)
T ss_pred cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc---------ccchhcCCCCceeh---HHH-H
Confidence 4567788889999977765 333334 889999999876433 33233322100011 111 3
Q ss_pred CEEEEccCCCCCCCCCCceeeehH-----HHHHHHHHHHHcC--CCEEEEecccccccccCCCCCCcchhhcchhhHHHH
Q 022216 137 EAVVCATGFQPGWDLFAPWKVDNF-----GTVNLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI 209 (301)
Q Consensus 137 d~Vi~~Ag~~~~~~~~~~~~~N~~-----g~~~l~~a~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~ 209 (301)
+.+.+|+.-.- .-|...|+-|+. .+..+.++..++. .+.+|.+|..++|-........++.... +.-..
T Consensus 79 na~g~n~l~P~-rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~q---gfd~~ 154 (315)
T KOG3019|consen 79 NAVGNNALLPI-RRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQ---GFDIL 154 (315)
T ss_pred hhhhhhccCch-hhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccC---ChHHH
Confidence 34444444211 133334444444 3778889887764 3579999999998765544333332211 11123
Q ss_pred HHHHH----HHHHHHcCCcEEEEecCcccCCCCCCc------eee-----ccccccccCCCCHHHHHHHHHHHhcCCCCC
Q 022216 210 AKLQA----EQYIRKSGINYTIIRPGGLRNEPPTGN------IIM-----ETEDTLYEGTISRDQVAEVAVEALLHPESS 274 (301)
Q Consensus 210 sK~~~----e~~~~~~~i~~~~irpg~v~~~~~~~~------~~~-----~~~~~~~~~~v~~~Dva~~~~~~l~~~~~~ 274 (301)
+.+.. ..+......++++||-|.+.|...... +.+ -+..+.+.+|||++|++..+..+|+.+...
T Consensus 155 srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~ 234 (315)
T KOG3019|consen 155 SRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVK 234 (315)
T ss_pred HHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCC
Confidence 33322 222334568999999999988643221 111 123455668999999999999999998755
Q ss_pred CcEEEeecCCCCCCcCHHHHHHHhhc
Q 022216 275 YKVVEIISRVDAPKRSYEDLFGSIKQ 300 (301)
Q Consensus 275 ~~~~~v~~~~~~~~~s~~e~~~~i~~ 300 (301)
+ +. ++..+++.+-.|+.+.++.
T Consensus 235 G-Vi---NgvAP~~~~n~Ef~q~lg~ 256 (315)
T KOG3019|consen 235 G-VI---NGVAPNPVRNGEFCQQLGS 256 (315)
T ss_pred c-ee---cccCCCccchHHHHHHHHH
Confidence 5 44 4444699999999988753
No 307
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.75 E-value=6.3e-07 Score=81.72 Aligned_cols=176 Identities=9% Similarity=0.159 Sum_probs=101.8
Q ss_pred cccCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChH
Q 022216 63 SVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126 (301)
Q Consensus 63 ~~~~~~vlVtGa----------------tG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 126 (301)
.+++|+|||||| +|.+|.+++++|+++|++|+++.++.+ .. ...+ +...|+++ .+
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~~~~--~~~~dv~~-~~ 255 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----TPAG--VKRIDVES-AQ 255 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----CCCC--cEEEccCC-HH
Confidence 468999999999 888999999999999999999887652 11 1122 34578888 55
Q ss_pred hHHHHh----cCCCCEEEEccCCCCCC-------CC---CCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCCC
Q 022216 127 KLSEAI----GDDSEAVVCATGFQPGW-------DL---FAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQ 192 (301)
Q Consensus 127 ~~~~~~----~~~~d~Vi~~Ag~~~~~-------~~---~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~ 192 (301)
++.+++ +. +|++|||||+.... .. ...+...+.-+-.+++.+++...++-+.++-...
T Consensus 256 ~~~~~v~~~~~~-~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaaE------- 327 (399)
T PRK05579 256 EMLDAVLAALPQ-ADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAAE------- 327 (399)
T ss_pred HHHHHHHHhcCC-CCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEccC-------
Confidence 555444 45 99999999974311 00 0112334444556777766543222133333220
Q ss_pred CCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEEEEecC---cccCCCCCCceeeccccc-cccCCCCHHHHHHHHHHHh
Q 022216 193 ILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG---GLRNEPPTGNIIMETEDT-LYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 193 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~irpg---~v~~~~~~~~~~~~~~~~-~~~~~v~~~Dva~~~~~~l 268 (301)
.+ . .-+. +.+-+.+++.++++...= .-+|......+.+..... ...+..+=.++|+.++..+
T Consensus 328 ---t~-------~---~~~~-A~~kl~~k~~D~ivaN~i~~~~~fg~~~n~~~ii~~~~~~~~~~~~~K~~iA~~i~~~i 393 (399)
T PRK05579 328 ---TG-------D---VLEY-ARAKLKRKGLDLIVANDVSAGGGFGSDDNEVTLIWSDGGEVKLPLMSKLELARRLLDEI 393 (399)
T ss_pred ---Cc-------h---HHHH-HHHHHHHcCCeEEEEecCCcCCCcCCCceEEEEEECCCcEEEcCCCCHHHHHHHHHHHH
Confidence 11 0 0122 222345688888876542 223333333333332222 2234557788999988766
Q ss_pred c
Q 022216 269 L 269 (301)
Q Consensus 269 ~ 269 (301)
.
T Consensus 394 ~ 394 (399)
T PRK05579 394 A 394 (399)
T ss_pred H
Confidence 4
No 308
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.68 E-value=1.3e-07 Score=86.56 Aligned_cols=93 Identities=28% Similarity=0.434 Sum_probs=70.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCC-C-eEEEEEeCCchhhhcccc-CCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCC
Q 022216 69 IFVAGATGSSGKRIVEQLLAKG-F-AVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF 145 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G-~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~ 145 (301)
|+|.|+ |++|+.+++.|++.+ . +|++.+|+.++++++... ...++..++.|+.| .+++.+.+++ .|+||||+|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~-~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-PESLAELLRG-CDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-HHHHHHHHTT-SSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-HHHHHHHHhc-CCEEEECCcc
Confidence 789999 999999999999997 4 899999999988877654 56799999999999 8889999999 9999999985
Q ss_pred CCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEE
Q 022216 146 QPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFIL 179 (301)
Q Consensus 146 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~ 179 (301)
.. ...++++|.+.|+ ++|-
T Consensus 78 ~~--------------~~~v~~~~i~~g~-~yvD 96 (386)
T PF03435_consen 78 FF--------------GEPVARACIEAGV-HYVD 96 (386)
T ss_dssp GG--------------HHHHHHHHHHHT--EEEE
T ss_pred ch--------------hHHHHHHHHHhCC-Ceec
Confidence 41 3456666666654 4555
No 309
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.62 E-value=1.2e-07 Score=78.39 Aligned_cols=80 Identities=25% Similarity=0.290 Sum_probs=64.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccC--CCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
++++++++|+||+|++|+.+++.|++.|++|+++.|+.++.+++.... ..+......|..+ .+.+.+.+.+ .|+||
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~-~diVi 102 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAIKG-ADVVF 102 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHHhc-CCEEE
Confidence 567899999999999999999999999999999999987665543211 1244566678888 7888889999 99999
Q ss_pred EccC
Q 022216 141 CATG 144 (301)
Q Consensus 141 ~~Ag 144 (301)
++..
T Consensus 103 ~at~ 106 (194)
T cd01078 103 AAGA 106 (194)
T ss_pred ECCC
Confidence 9764
No 310
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.62 E-value=2.4e-06 Score=77.71 Aligned_cols=175 Identities=12% Similarity=0.150 Sum_probs=105.6
Q ss_pred cccCCeEEEEcC---------------C-chHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChH
Q 022216 63 SVKQKKIFVAGA---------------T-GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126 (301)
Q Consensus 63 ~~~~~~vlVtGa---------------t-G~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 126 (301)
.+++|+|||||| + |.+|.+++++|.++|++|+++.++.... ....+ ...|+++ .+
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~~~~--~~~~v~~-~~ 252 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TPPGV--KSIKVST-AE 252 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CCCCc--EEEEecc-HH
Confidence 478999999999 3 4599999999999999999987665321 11222 4578887 54
Q ss_pred hH-HHHh----cCCCCEEEEccCCCCCC----------CCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccCC
Q 022216 127 KL-SEAI----GDDSEAVVCATGFQPGW----------DLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMG 191 (301)
Q Consensus 127 ~~-~~~~----~~~~d~Vi~~Ag~~~~~----------~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~ 191 (301)
++ ...+ +. +|++|+|||+.... .....+..|+.-+-.+++..++...+ .+.++-...
T Consensus 253 ~~~~~~~~~~~~~-~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~-~~lvgF~aE------ 324 (390)
T TIGR00521 253 EMLEAALNELAKD-FDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKH-QVIVGFKAE------ 324 (390)
T ss_pred HHHHHHHHhhccc-CCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCC-cEEEEEEcC------
Confidence 44 3333 34 99999999975321 11234567888888888888765433 333433321
Q ss_pred CCCCcchhhcchhhHHHHHHHHHHHHHHHcCCcEEEEecCc--ccCCCCCCceeeccccccccCCCCHHHHHHHHHHHh
Q 022216 192 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG--LRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEAL 268 (301)
Q Consensus 192 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~irpg~--v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l 268 (301)
.+. + .-+ .+.+-+++++.++++...-. -+|......+.+........+..+=+++|+.++..+
T Consensus 325 ----t~~------~---l~~-~A~~kl~~k~~D~ivaN~i~~~~fg~~~n~~~li~~~~~~~~~~~~K~~iA~~i~~~~ 389 (390)
T TIGR00521 325 ----TND------D---LIK-YAKEKLKKKNLDMIVANDVSQRGFGSDENEVYIFSKHGHKELPLMSKLEVAERILDEI 389 (390)
T ss_pred ----CCc------H---HHH-HHHHHHHHcCCCEEEEccCCccccCCCCcEEEEEECCCeEEeCCCCHHHHHHHHHHHh
Confidence 100 0 112 23333557889988766432 133333333333333222334556788999887665
No 311
>PRK05086 malate dehydrogenase; Provisional
Probab=98.56 E-value=3.9e-07 Score=80.75 Aligned_cols=113 Identities=19% Similarity=0.156 Sum_probs=77.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHH-C--CCeEEEEEeCCchhhhccccCC-CCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLA-K--GFAVKAGVRDLDKAKTTLSKDN-PSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~-~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
|+|+|+||+|++|++++..|.. . ++++++++|++........-.+ .....+.+ .+ .+.+.+.+++ +|+||.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~-~~d~~~~l~~-~DiVIit 76 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FS-GEDPTPALEG-ADVVLIS 76 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eC-CCCHHHHcCC-CCEEEEc
Confidence 6899999999999999988855 2 4577877776432110010011 11122333 22 2345677888 9999999
Q ss_pred cCCCCC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 143 TGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 143 Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+|.... .+....+..|.....++++++++.+.+++|.+.|-
T Consensus 77 aG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 77 AGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 997543 33456678899999999999999988888887774
No 312
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.49 E-value=3.7e-06 Score=71.10 Aligned_cols=68 Identities=18% Similarity=0.273 Sum_probs=46.3
Q ss_pred eEEEEc-CCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHH-------HhcCCCCEE
Q 022216 68 KIFVAG-ATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSE-------AIGDDSEAV 139 (301)
Q Consensus 68 ~vlVtG-atG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-------~~~~~~d~V 139 (301)
+=.||. ++|+||+++|++|+++|++|+++.+.. ... . . . ...+|+.+ .+++.+ .++. +|++
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~-~l~---~-~-~---~~~~Dv~d-~~s~~~l~~~v~~~~g~-iDiL 84 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR-ALK---P-E-P---HPNLSIRE-IETTKDLLITLKELVQE-HDIL 84 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh-hcc---c-c-c---CCcceeec-HHHHHHHHHHHHHHcCC-CCEE
Confidence 344554 489999999999999999999887531 111 0 0 1 13478877 444443 3445 9999
Q ss_pred EEccCCC
Q 022216 140 VCATGFQ 146 (301)
Q Consensus 140 i~~Ag~~ 146 (301)
|||||+.
T Consensus 85 VnnAgv~ 91 (227)
T TIGR02114 85 IHSMAVS 91 (227)
T ss_pred EECCEec
Confidence 9999964
No 313
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.41 E-value=2.1e-06 Score=73.57 Aligned_cols=74 Identities=18% Similarity=0.202 Sum_probs=57.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF 145 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag~ 145 (301)
|+|||+||||. |+.+++.|.++|++|++..++....+.+.. .+...+..+..| .+++.+.+.+ ++|+||+++..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~---~g~~~v~~g~l~-~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI---HQALTVHTGALD-PQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc---cCCceEEECCCC-HHHHHHHHHhcCCCEEEEcCCH
Confidence 58999999999 999999999999999999998875544331 223345566677 6778888866 69999998753
No 314
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.40 E-value=9e-07 Score=77.68 Aligned_cols=79 Identities=29% Similarity=0.309 Sum_probs=61.1
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEeCC---chhhhcccc---CCCCeEEEEccCCCChHhHHHHhcCC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDL---DKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGDD 135 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~-V~~~~r~~---~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~ 135 (301)
.+++|+++|+|| ||+|++++..|++.|++ |+++.|+. ++.+++... ....+.+...|+.+ .+.+.+.+..
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~~- 199 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND-TEKLKAEIAS- 199 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh-hhHHHhhhcc-
Confidence 356889999999 89999999999999986 99999986 444443221 22345566788887 6778888888
Q ss_pred CCEEEEccC
Q 022216 136 SEAVVCATG 144 (301)
Q Consensus 136 ~d~Vi~~Ag 144 (301)
.|+||||..
T Consensus 200 ~DilINaTp 208 (289)
T PRK12548 200 SDILVNATL 208 (289)
T ss_pred CCEEEEeCC
Confidence 999999864
No 315
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.33 E-value=1.4e-06 Score=75.97 Aligned_cols=77 Identities=30% Similarity=0.420 Sum_probs=65.6
Q ss_pred eEEEEcCCchHHHHHHHHHHH----CCCeEEEEEeCCchhhhcccc-------CCCCeEEEEccCCCChHhHHHHhcCCC
Q 022216 68 KIFVAGATGSSGKRIVEQLLA----KGFAVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDDS 136 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~----~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 136 (301)
-++|.||+||-|..++++++. .|...-+..|+++++++.+.. ......++.+|..| ++++.+..++ .
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n-~~Sl~emak~-~ 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSAN-EASLDEMAKQ-A 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCC-HHHHHHHHhh-h
Confidence 588999999999999999999 788999999999998875532 11234488999999 8999999999 9
Q ss_pred CEEEEccCCC
Q 022216 137 EAVVCATGFQ 146 (301)
Q Consensus 137 d~Vi~~Ag~~ 146 (301)
.+|+||+|+-
T Consensus 85 ~vivN~vGPy 94 (423)
T KOG2733|consen 85 RVIVNCVGPY 94 (423)
T ss_pred EEEEeccccc
Confidence 9999999963
No 316
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.29 E-value=1.9e-06 Score=76.60 Aligned_cols=73 Identities=22% Similarity=0.333 Sum_probs=55.8
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHC-C-CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAK-G-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
.+++++|+||||+|+||+.++++|+++ | .+++++.|+..++.++..+ +..+|+. .+.+.+.+ +|+||
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e------l~~~~i~----~l~~~l~~-aDiVv 220 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE------LGGGKIL----SLEEALPE-ADIVV 220 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH------hccccHH----hHHHHHcc-CCEEE
Confidence 468899999999999999999999865 5 5899889987766654321 1123443 36678888 99999
Q ss_pred EccCCC
Q 022216 141 CATGFQ 146 (301)
Q Consensus 141 ~~Ag~~ 146 (301)
|+++..
T Consensus 221 ~~ts~~ 226 (340)
T PRK14982 221 WVASMP 226 (340)
T ss_pred ECCcCC
Confidence 999864
No 317
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.26 E-value=5.6e-06 Score=73.64 Aligned_cols=103 Identities=13% Similarity=0.149 Sum_probs=73.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEeCC--chhhhccccCCCCeEEEEccCCCC----------hHhH
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDL--DKAKTTLSKDNPSLQIVKADVTEG----------SAKL 128 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~----------~~~~ 128 (301)
+|.||||+|.+|+.++..|+..|. ++++++++. +.+ +....|+.|. ....
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~-----------~g~~~Dl~d~~~~~~~~~~i~~~~ 70 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL-----------EGVVMELQDCAFPLLKGVVITTDP 70 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc-----------ceeeeehhhhcccccCCcEEecCh
Confidence 789999999999999999998662 488888875 322 2223344331 0345
Q ss_pred HHHhcCCCCEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcC-CC-EEEEecc
Q 022216 129 SEAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRG-VN-RFILISS 182 (301)
Q Consensus 129 ~~~~~~~~d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~-~~-~iV~~SS 182 (301)
.+.+++ +|+|||+||... .++....++.|..-...+.+.+++.. .. .+|.+|.
T Consensus 71 ~~~~~~-aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN 127 (323)
T cd00704 71 EEAFKD-VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN 127 (323)
T ss_pred HHHhCC-CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 678888 999999999754 33455667889999999999998883 43 5555554
No 318
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.25 E-value=1.8e-06 Score=76.76 Aligned_cols=163 Identities=10% Similarity=0.027 Sum_probs=99.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEeCCch--hhhccccCCCCeEEEE--ccCCCChHhHHHHhcC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDK--AKTTLSKDNPSLQIVK--ADVTEGSAKLSEAIGD 134 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~--~Dl~~~~~~~~~~~~~ 134 (301)
.++|.|+|++|.+|..++-.|+..|. +++++++.... +.....+.......+. ..++. ...+.+++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~~d 78 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD---DPNVAFKD 78 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec---CcHHHhCC
Confidence 46899999999999999999998874 68888875432 2221111000000000 01111 23567788
Q ss_pred CCCEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCC--CEEEEecccc---cccccCCCCCCcchh-hcchhhH
Q 022216 135 DSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV--NRFILISSIL---VNGAAMGQILNPAYI-FLNVFGL 206 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~--~~iV~~SS~~---~~~~~~~~~~~~~~~-~~~~~~~ 206 (301)
.|+||.+||... ..+....++.|..-...+.+.+++++. ..+|.+|... +|-. .... ...+...
T Consensus 79 -aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-------~k~sg~~p~~~V 150 (322)
T cd01338 79 -ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA-------MKNAPDIPPDNF 150 (322)
T ss_pred -CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH-------HHHcCCCChHhe
Confidence 999999999743 334556678899989999999988762 3555555421 0100 0011 0122334
Q ss_pred HHHHHHHHHHHH----HHcCCcEEEEecCcccCCCCC
Q 022216 207 TLIAKLQAEQYI----RKSGINYTIIRPGGLRNEPPT 239 (301)
Q Consensus 207 y~~sK~~~e~~~----~~~~i~~~~irpg~v~~~~~~ 239 (301)
|+.+++..+++- +..|++...|+..+++|+...
T Consensus 151 iG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~ 187 (322)
T cd01338 151 TAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP 187 (322)
T ss_pred EEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence 555666665433 357888888888788887644
No 319
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.24 E-value=5.8e-06 Score=73.58 Aligned_cols=105 Identities=11% Similarity=0.073 Sum_probs=74.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEeCCchhhhccccCCCCeEEEEccCCCCh----------HhHHH
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS----------AKLSE 130 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~----------~~~~~ 130 (301)
+|.|+|++|.+|..++..|+..|. +++++++++... .......|+.|.. ....+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~ 71 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------VLEGVVMELMDCAFPLLDGVVPTHDPAV 71 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------ccceeEeehhcccchhcCceeccCChHH
Confidence 589999999999999999998553 588888764431 1222334444411 13467
Q ss_pred HhcCCCCEEEEccCCCCC--CCCCCceeeehHHHHHHHHHHHHcC-C-CEEEEecc
Q 022216 131 AIGDDSEAVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRG-V-NRFILISS 182 (301)
Q Consensus 131 ~~~~~~d~Vi~~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~-~-~~iV~~SS 182 (301)
.+.+ +|+||++||.... +++...++.|+.-...+.+.+++.. . ..+|.+|.
T Consensus 72 ~~~~-aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 72 AFTD-VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred HhCC-CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 7888 9999999997543 3466777899999999999998873 4 45566554
No 320
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.15 E-value=2.9e-06 Score=65.76 Aligned_cols=76 Identities=22% Similarity=0.366 Sum_probs=57.1
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEeCCchhhhccccC-CCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
++++++++|.|+ |+.|+.++..|++.|.+ |+++.|+.++.+++.... ...+.++. +.+ +.+.+.+ .|+||
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~~~----~~~~~~~-~DivI 80 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--LED----LEEALQE-ADIVI 80 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--GGG----HCHHHHT-ESEEE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--HHH----HHHHHhh-CCeEE
Confidence 567999999998 99999999999999986 999999988877765422 22344443 333 4466777 99999
Q ss_pred EccCCC
Q 022216 141 CATGFQ 146 (301)
Q Consensus 141 ~~Ag~~ 146 (301)
++.+..
T Consensus 81 ~aT~~~ 86 (135)
T PF01488_consen 81 NATPSG 86 (135)
T ss_dssp E-SSTT
T ss_pred EecCCC
Confidence 997644
No 321
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.13 E-value=2.6e-05 Score=65.87 Aligned_cols=99 Identities=33% Similarity=0.446 Sum_probs=74.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHH-hcCCCCEEEEccCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGF 145 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~~~d~Vi~~Ag~ 145 (301)
|+++|.|+ |-+|..+|+.|.+.|++|++++++++...+... .......+.+|-+| .+.+.++ +.+ .|++|-..+-
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~-~~~~~~~v~gd~t~-~~~L~~agi~~-aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA-DELDTHVVIGDATD-EDVLEEAGIDD-ADAVVAATGN 76 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh-hhcceEEEEecCCC-HHHHHhcCCCc-CCEEEEeeCC
Confidence 57889997 999999999999999999999999988776442 34678899999999 7888887 556 9999987653
Q ss_pred CCCCCCCCceeeehHHHHHHHHHHH-HcCCCEEEEecc
Q 022216 146 QPGWDLFAPWKVDNFGTVNLVEACR-KRGVNRFILISS 182 (301)
Q Consensus 146 ~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~~iV~~SS 182 (301)
. ++|. -++..++ ..|++++|---.
T Consensus 77 d---------~~N~----i~~~la~~~~gv~~viar~~ 101 (225)
T COG0569 77 D---------EVNS----VLALLALKEFGVPRVIARAR 101 (225)
T ss_pred C---------HHHH----HHHHHHHHhcCCCcEEEEec
Confidence 2 2222 2444444 468777766444
No 322
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.07 E-value=1.2e-05 Score=62.77 Aligned_cols=107 Identities=19% Similarity=0.202 Sum_probs=74.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhcccc-------CCCCeEEEEccCCCChHhHHHHhcCCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDDSE 137 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 137 (301)
++|.|+|++|.+|++++-.|+..+ .++++++++++..+....+ ......+.. . ..+.+++ .|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~-----~~~~~~~-aD 71 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---G-----DYEALKD-AD 71 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---S-----SGGGGTT-ES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---c-----ccccccc-cc
Confidence 589999999999999999999987 4799889886554332111 111222222 1 2335677 99
Q ss_pred EEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCCC-EEEEecc
Q 022216 138 AVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (301)
Q Consensus 138 ~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS 182 (301)
+||.+||... .++....++.|..-...+.+.+++.+.+ .++.+|.
T Consensus 72 ivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtN 119 (141)
T PF00056_consen 72 IVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTN 119 (141)
T ss_dssp EEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred EEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCC
Confidence 9999999643 3445566788999999999999888753 4555543
No 323
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=98.07 E-value=0.0014 Score=51.31 Aligned_cols=196 Identities=16% Similarity=0.117 Sum_probs=111.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCC--CChHhHH----HHhcC-CCCE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT--EGSAKLS----EAIGD-DSEA 138 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~----~~~~~-~~d~ 138 (301)
..+|+|-||-|-+|+++++.|.+++|-|.-++-...... ..-.++..|-. +.++++. +.+.+ ++|.
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDa 75 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDA 75 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------cceEEecCCcchhHHHHHHHHHHHHhhcccccce
Confidence 468999999999999999999999998887765544311 12223333322 1123333 33444 8999
Q ss_pred EEEccCCCCCC---------CCCCceeeehHHHHHHHHHHHHc-CCCEEEEecccccccccCCCCCCcchhhcchhhHHH
Q 022216 139 VVCATGFQPGW---------DLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 208 (301)
Q Consensus 139 Vi~~Ag~~~~~---------~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~ 208 (301)
||.-||--... +.+.++..-+.....-...+.++ +.+-++-+.... +...+....-.|+
T Consensus 76 v~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk-----------aAl~gTPgMIGYG 144 (236)
T KOG4022|consen 76 VFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK-----------AALGGTPGMIGYG 144 (236)
T ss_pred EEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc-----------cccCCCCcccchh
Confidence 99988743221 11222222222111111112111 223344433321 1111122356789
Q ss_pred HHHHHHHHHHHH-----cCC----cEEEEecCcccCCCCCCceeeccccccccCCCCHHHHHHHHHHHhcC--CCCCCcE
Q 022216 209 IAKLQAEQYIRK-----SGI----NYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH--PESSYKV 277 (301)
Q Consensus 209 ~sK~~~e~~~~~-----~~i----~~~~irpg~v~~~~~~~~~~~~~~~~~~~~~v~~~Dva~~~~~~l~~--~~~~~~~ 277 (301)
..|.+..++.+. .|+ -+..|-|-.+.+|+.+..+. +.-+..|.+...+++..+..... ....+..
T Consensus 145 MAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP----~ADfssWTPL~fi~e~flkWtt~~~RPssGsL 220 (236)
T KOG4022|consen 145 MAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMP----NADFSSWTPLSFISEHFLKWTTETSRPSSGSL 220 (236)
T ss_pred HHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCC----CCcccCcccHHHHHHHHHHHhccCCCCCCCce
Confidence 999999887653 344 46678888899998776633 22234678888999888777643 2245666
Q ss_pred EEeecC
Q 022216 278 VEIISR 283 (301)
Q Consensus 278 ~~v~~~ 283 (301)
.++...
T Consensus 221 lqi~Tt 226 (236)
T KOG4022|consen 221 LQITTT 226 (236)
T ss_pred EEEEec
Confidence 666654
No 324
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=98.06 E-value=1.7e-05 Score=64.65 Aligned_cols=99 Identities=14% Similarity=0.206 Sum_probs=58.9
Q ss_pred cCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC-hHh
Q 022216 65 KQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAK 127 (301)
Q Consensus 65 ~~~~vlVtGa----------------tG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~ 127 (301)
+||+||||+| ||-.|.++++++..+|++|+++.... ... .+.++..+..+-.++ .+.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~-----~p~~~~~i~v~sa~em~~~ 75 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLP-----PPPGVKVIRVESAEEMLEA 75 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S---------TTEEEEE-SSHHHHHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-ccc-----ccccceEEEecchhhhhhh
Confidence 5777777764 79999999999999999999987663 211 235677776544331 156
Q ss_pred HHHHhcCCCCEEEEccCCCCC-------C----CCCCceeeehHHHHHHHHHHH
Q 022216 128 LSEAIGDDSEAVVCATGFQPG-------W----DLFAPWKVDNFGTVNLVEACR 170 (301)
Q Consensus 128 ~~~~~~~~~d~Vi~~Ag~~~~-------~----~~~~~~~~N~~g~~~l~~a~~ 170 (301)
+.+.+.+ .|++||+|++... . +-...+.+.+.-+-.+++.+.
T Consensus 76 ~~~~~~~-~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~pkIL~~l~ 128 (185)
T PF04127_consen 76 VKELLPS-ADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTPKILAELR 128 (185)
T ss_dssp HHHHGGG-GSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-GGHGCCHH
T ss_pred hccccCc-ceeEEEecchhheeehhccccccccccCcceEEEEEeChHHHHHHH
Confidence 6666777 8999999997541 1 112344555555666777774
No 325
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.99 E-value=8.8e-05 Score=66.46 Aligned_cols=108 Identities=22% Similarity=0.314 Sum_probs=74.0
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCch---------------------hhh---cccc--CCCCe
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---------------------AKT---TLSK--DNPSL 114 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~---------------------~~~---~~~~--~~~~~ 114 (301)
..+++++|+|.|+ |++|.++++.|+..|. ++++++++.-. .+. .+.+ ....+
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i 98 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI 98 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence 3567899999997 8999999999999997 78888876411 000 0000 23456
Q ss_pred EEEEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccccc
Q 022216 115 QIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (301)
Q Consensus 115 ~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~ 187 (301)
+.+..|++. +.+.+.+++ .|+||.+.. |...-..+-++|++.++ .+|+.+....+|
T Consensus 99 ~~~~~~~~~--~~~~~~~~~-~DlVid~~D-------------~~~~r~~in~~~~~~~i-p~i~~~~~g~~G 154 (338)
T PRK12475 99 VPVVTDVTV--EELEELVKE-VDLIIDATD-------------NFDTRLLINDLSQKYNI-PWIYGGCVGSYG 154 (338)
T ss_pred EEEeccCCH--HHHHHHhcC-CCEEEEcCC-------------CHHHHHHHHHHHHHcCC-CEEEEEecccEE
Confidence 667777764 567788888 999998863 22333556778888875 577766655444
No 326
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.93 E-value=0.00014 Score=65.21 Aligned_cols=108 Identities=22% Similarity=0.314 Sum_probs=75.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchh---------------------hh---cccc--CCCCe
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA---------------------KT---TLSK--DNPSL 114 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~---------------------~~---~~~~--~~~~~ 114 (301)
..++..+|+|.|+ |++|.++++.|+..|. ++++++++.-+. +. .+.+ ..-.+
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v 98 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV 98 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence 4567889999998 9999999999999998 888888763111 00 0000 22345
Q ss_pred EEEEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccccc
Q 022216 115 QIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (301)
Q Consensus 115 ~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~ 187 (301)
..+..+++. +.+.+.+++ .|+||.+.. |...-..+.++|.+.++ .+|+.++...||
T Consensus 99 ~~~~~~~~~--~~~~~~~~~-~DlVid~~D-------------n~~~r~~ln~~~~~~~i-P~i~~~~~g~~G 154 (339)
T PRK07688 99 EAIVQDVTA--EELEELVTG-VDLIIDATD-------------NFETRFIVNDAAQKYGI-PWIYGACVGSYG 154 (339)
T ss_pred EEEeccCCH--HHHHHHHcC-CCEEEEcCC-------------CHHHHHHHHHHHHHhCC-CEEEEeeeeeee
Confidence 666667754 566777888 999998852 34445667888888875 678877666554
No 327
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.91 E-value=4.6e-05 Score=71.26 Aligned_cols=76 Identities=25% Similarity=0.310 Sum_probs=55.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc-hhhhcccc-CCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~-~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
+++|+|+|+|+++ +|..+++.|++.|++|++.+++.. ...+.... ...++.++.+|..+ +..++ +|+||+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~-~d~vv~ 74 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------EFLEG-VDLVVV 74 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------hHhhc-CCEEEE
Confidence 4689999999866 999999999999999999988752 22211110 12356777877765 23456 999999
Q ss_pred ccCCCC
Q 022216 142 ATGFQP 147 (301)
Q Consensus 142 ~Ag~~~ 147 (301)
++|...
T Consensus 75 ~~g~~~ 80 (450)
T PRK14106 75 SPGVPL 80 (450)
T ss_pred CCCCCC
Confidence 998643
No 328
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.85 E-value=0.00049 Score=53.23 Aligned_cols=104 Identities=18% Similarity=0.325 Sum_probs=71.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhcc----------------------c--cCCCCeEEEEcc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTL----------------------S--KDNPSLQIVKAD 120 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~----------------------~--~~~~~~~~~~~D 120 (301)
.++|+|.|+ |++|+++++.|+..|. ++++++.+.-....+. . .+..++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 578999997 9999999999999997 6777776542211100 0 023456677777
Q ss_pred CCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccccc
Q 022216 121 VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (301)
Q Consensus 121 l~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~ 187 (301)
++ .+.+.+.+++ +|+||.|.. |...-..+.+.|++.+. .+|+.+....+|
T Consensus 81 ~~--~~~~~~~~~~-~d~vi~~~d-------------~~~~~~~l~~~~~~~~~-p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 ID--EENIEELLKD-YDIVIDCVD-------------SLAARLLLNEICREYGI-PFIDAGVNGFYG 130 (135)
T ss_dssp CS--HHHHHHHHHT-SSEEEEESS-------------SHHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred cc--cccccccccC-CCEEEEecC-------------CHHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 73 4667788888 999999863 24445667888888875 788877664443
No 329
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.81 E-value=4.2e-05 Score=67.80 Aligned_cols=106 Identities=18% Similarity=0.218 Sum_probs=74.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhccccC-------CCCeEEEEccCCCChHhHHHHhcCCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKD-------NPSLQIVKADVTEGSAKLSEAIGDDSE 137 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~~~d 137 (301)
++|.|.|+ |++|+.++..|+..| ++|++++|++++.+.+..+. .....+.. .+ .+.+.+ .|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~-----~~~l~~-aD 70 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GD-----YSDCKD-AD 70 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CC-----HHHhCC-CC
Confidence 47899996 999999999999999 58999999887755433211 11222221 22 123577 99
Q ss_pred EEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCCC-EEEEecc
Q 022216 138 AVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (301)
Q Consensus 138 ~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS 182 (301)
+||+++|... ..+....++.|..-...+.+.+++.+.+ .+|.+|.
T Consensus 71 IVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 71 IVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 9999999643 3344566778888889999999887643 5566554
No 330
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.79 E-value=0.0003 Score=58.39 Aligned_cols=107 Identities=18% Similarity=0.214 Sum_probs=70.6
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhh-------------------h---cccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK-------------------T---TLSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~-------------------~---~~~~--~~~~~~~ 116 (301)
..+++++|+|.|+ |++|.++++.|+..|. ++++++++.-... . ...+ +..+++.
T Consensus 17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 95 (202)
T TIGR02356 17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA 95 (202)
T ss_pred HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 3567899999996 9999999999999996 7888877631110 0 0011 1223444
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~ 186 (301)
+..++. .+.+.+.+++ .|+||.+.. |...-..+-+.|++.++ .+|+.+....+
T Consensus 96 ~~~~i~--~~~~~~~~~~-~D~Vi~~~d-------------~~~~r~~l~~~~~~~~i-p~i~~~~~g~~ 148 (202)
T TIGR02356 96 LKERVT--AENLELLINN-VDLVLDCTD-------------NFATRYLINDACVALGT-PLISAAVVGFG 148 (202)
T ss_pred ehhcCC--HHHHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEeccCe
Confidence 444454 3567778888 999998863 23334557788888875 57776655443
No 331
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.77 E-value=0.00042 Score=64.97 Aligned_cols=222 Identities=19% Similarity=0.159 Sum_probs=125.3
Q ss_pred cccCCeEEEEcCC-chHHHHHHHHHHHCCCeEEEEEeCCchh-hh----cccc---CCCCeEEEEccCCCC--hHhHHHH
Q 022216 63 SVKQKKIFVAGAT-GSSGKRIVEQLLAKGFAVKAGVRDLDKA-KT----TLSK---DNPSLQIVKADVTEG--SAKLSEA 131 (301)
Q Consensus 63 ~~~~~~vlVtGat-G~iG~~~~~~l~~~G~~V~~~~r~~~~~-~~----~~~~---~~~~~~~~~~Dl~~~--~~~~~~~ 131 (301)
...++.+|||||+ |.||.+++..|++-|++|++..-+-++. .+ +... ....+-++..+..+. -+.+.+-
T Consensus 393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew 472 (866)
T COG4982 393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW 472 (866)
T ss_pred CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence 3467999999986 7899999999999999999986554432 11 1111 234455666666541 3444443
Q ss_pred hcC-----------------CCCEEEEccCCCCCCC-------CCCceeeehHHHHHHHHHHHHcC----C---CEEEEe
Q 022216 132 IGD-----------------DSEAVVCATGFQPGWD-------LFAPWKVDNFGTVNLVEACRKRG----V---NRFILI 180 (301)
Q Consensus 132 ~~~-----------------~~d~Vi~~Ag~~~~~~-------~~~~~~~N~~g~~~l~~a~~~~~----~---~~iV~~ 180 (301)
+.+ .+|.+|-+|++.-..+ .+..+++-+...++++-.+++.+ + -++|..
T Consensus 473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLP 552 (866)
T COG4982 473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLP 552 (866)
T ss_pred hccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEec
Confidence 321 3678888887543211 12233444555566666665543 2 256776
Q ss_pred cccccccccCCCCCCcchhhcchhhHHHHHHHHHHHHHHHc----C----CcEEEEecCcccCC--CCCCceeecccccc
Q 022216 181 SSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS----G----INYTIIRPGGLRNE--PPTGNIIMETEDTL 250 (301)
Q Consensus 181 SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~----~----i~~~~irpg~v~~~--~~~~~~~~~~~~~~ 250 (301)
.|.. .+ -+-.-+.|+.+|++.|.++.+. + +.++--+.||+.|. |..+.++....+..
T Consensus 553 gSPN-----rG--------~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~ 619 (866)
T COG4982 553 GSPN-----RG--------MFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAIEKA 619 (866)
T ss_pred CCCC-----CC--------ccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHHHHh
Confidence 6642 11 1112378999999999776431 1 22233455666665 33344444333333
Q ss_pred ccCCCCHHHHHHHHHHHhcCC-----CCCCcEEEeecCCCCCCcCHHHHHHH
Q 022216 251 YEGTISRDQVAEVAVEALLHP-----ESSYKVVEIISRVDAPKRSYEDLFGS 297 (301)
Q Consensus 251 ~~~~v~~~Dva~~~~~~l~~~-----~~~~~~~~v~~~~~~~~~s~~e~~~~ 297 (301)
-....+.+++|.-++.++... .....++++.++=+.-+..+.+++..
T Consensus 620 GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~~~~~a~~A~~ 671 (866)
T COG4982 620 GVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEVPLLKAELAAL 671 (866)
T ss_pred CceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccchhhHHHHHHH
Confidence 223456777777665444211 13456677777544455666666544
No 332
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.75 E-value=0.00038 Score=70.46 Aligned_cols=77 Identities=22% Similarity=0.284 Sum_probs=61.9
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCC-Ce-------------EEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHH
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKG-FA-------------VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSE 130 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 130 (301)
++|+|+|.|+ |++|+.+++.|++.+ ++ |.+.+++.+..+++.. ..+++..+..|++| .+++.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~-~~~~~~~v~lDv~D-~e~L~~ 644 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVE-GIENAEAVQLDVSD-SESLLK 644 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHH-hcCCCceEEeecCC-HHHHHH
Confidence 4789999997 999999999998763 33 7777777766665543 22467889999999 899999
Q ss_pred HhcCCCCEEEEccCC
Q 022216 131 AIGDDSEAVVCATGF 145 (301)
Q Consensus 131 ~~~~~~d~Vi~~Ag~ 145 (301)
.+++ +|+||++...
T Consensus 645 ~v~~-~DaVIsalP~ 658 (1042)
T PLN02819 645 YVSQ-VDVVISLLPA 658 (1042)
T ss_pred hhcC-CCEEEECCCc
Confidence 9999 9999999864
No 333
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.75 E-value=9.1e-05 Score=65.65 Aligned_cols=111 Identities=12% Similarity=0.131 Sum_probs=72.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCC--chhhhccccCCC-----CeEEEEccCCCChHhHHHHhcCCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDL--DKAKTTLSKDNP-----SLQIVKADVTEGSAKLSEAIGDDSE 137 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~--~~~~~~~~~~~~-----~~~~~~~Dl~~~~~~~~~~~~~~~d 137 (301)
|+|.|+|++|.+|..++..|+..|. +|++++|+. +++.....+... +.. .....++ . .+.+.+ .|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~---d-~~~l~~-aD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISS---D-LSDVAG-SD 74 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECC---C-HHHhCC-CC
Confidence 5899999999999999999999986 589889854 333221110000 000 0111122 1 234788 99
Q ss_pred EEEEccCCCCC--CCCCCceeeehHHHHHHHHHHHHcCC-CEEEEeccc
Q 022216 138 AVVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGV-NRFILISSI 183 (301)
Q Consensus 138 ~Vi~~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iV~~SS~ 183 (301)
+||.++|.... .+....++.|..-...+++.+.+.+. ..+|.+++.
T Consensus 75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np 123 (309)
T cd05294 75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP 123 (309)
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 99999996543 23344567788888888888877653 367777764
No 334
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.72 E-value=0.00037 Score=62.54 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=60.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC---eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+++|+|.||||++|+++++.|.++|+ +++.+.+..+..+.+.- .+......|+.+ . .+.+ +|+||.+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~---~g~~i~v~d~~~--~----~~~~-vDvVf~A 70 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSF---KGKELKVEDLTT--F----DFSG-VDIALFS 70 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeee---CCceeEEeeCCH--H----HHcC-CCEEEEC
Confidence 46899999999999999999999876 45777766544333211 123344445543 1 3457 9999998
Q ss_pred cCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 143 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+|.. -+..+...+.+.|+ ++|=.|+.
T Consensus 71 ~g~g--------------~s~~~~~~~~~~G~-~VIDlS~~ 96 (334)
T PRK14874 71 AGGS--------------VSKKYAPKAAAAGA-VVIDNSSA 96 (334)
T ss_pred CChH--------------HHHHHHHHHHhCCC-EEEECCch
Confidence 8632 14555666666665 66666664
No 335
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.71 E-value=0.00014 Score=64.67 Aligned_cols=115 Identities=13% Similarity=0.100 Sum_probs=73.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEeCCc--hhhhccccCCCCeEEEEccCCCChHhHHHHhcCCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLD--KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDS 136 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 136 (301)
..+|.|+|++|.+|++++-.|+..|. +++++++++. .+.....+..........+..- .....+.+++ .
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~~~~~~~~d-a 80 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-TTDPEEAFKD-V 80 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-ecChHHHhCC-C
Confidence 46899999999999999999998874 7888887542 2221111000000000001100 1123567788 9
Q ss_pred CEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCC-C-EEEEecc
Q 022216 137 EAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV-N-RFILISS 182 (301)
Q Consensus 137 d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~-~-~iV~~SS 182 (301)
|+||.+||... .++....+..|..-...+.+.+++.+. + .++.+|.
T Consensus 81 DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 130 (323)
T TIGR01759 81 DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGN 130 (323)
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 99999999743 345556678899999999999988864 4 4555543
No 336
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.71 E-value=0.00029 Score=65.87 Aligned_cols=73 Identities=22% Similarity=0.299 Sum_probs=61.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHH-hcCCCCEEEEccC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG 144 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~~~d~Vi~~Ag 144 (301)
|+|+|.|+ |.+|+++++.|.+.|++|++++++++..+.+.. ..++.++.+|.++ .+.+.++ +.+ +|.||.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~--~~~~~~~~gd~~~-~~~l~~~~~~~-a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD--RLDVRTVVGNGSS-PDVLREAGAED-ADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh--hcCEEEEEeCCCC-HHHHHHcCCCc-CCEEEEecC
Confidence 57999998 999999999999999999999998887665431 2468899999998 7778777 677 999998763
No 337
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.71 E-value=6.9e-05 Score=65.13 Aligned_cols=76 Identities=21% Similarity=0.250 Sum_probs=62.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ 146 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~ 146 (301)
..++|-||+||.|..++++|+.+|.+-.+..|+..++..+....+++...+.+ .+ ++.+.+...+ .++|+||+|+-
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~--~~-p~~~~~~~~~-~~VVlncvGPy 82 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPL--GV-PAALEAMASR-TQVVLNCVGPY 82 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCC--CC-HHHHHHHHhc-ceEEEeccccc
Confidence 56899999999999999999999998888899999888766444455544444 34 6788889999 99999999964
No 338
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.70 E-value=0.00019 Score=65.32 Aligned_cols=100 Identities=20% Similarity=0.296 Sum_probs=65.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHH-HHhcCCCCEEEEcc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLS-EAIGDDSEAVVCAT 143 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~~~d~Vi~~A 143 (301)
.++|.|.||||++|.++++.|+++ +.+|..+.++.+..+.... . .......|+.+ .+.+. +.+.+ +|+||.+.
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~-~--~~~l~~~~~~~-~~~~~~~~~~~-~DvVf~Al 112 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGS-V--FPHLITQDLPN-LVAVKDADFSD-VDAVFCCL 112 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchh-h--CccccCccccc-eecCCHHHhcC-CCEEEEcC
Confidence 579999999999999999999999 5799988876443222111 1 11122234433 22222 22577 99999987
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccc
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~ 186 (301)
+. .....++.++ +.+ .++|-.|+..-+
T Consensus 113 p~--------------~~s~~i~~~~-~~g-~~VIDlSs~fRl 139 (381)
T PLN02968 113 PH--------------GTTQEIIKAL-PKD-LKIVDLSADFRL 139 (381)
T ss_pred CH--------------HHHHHHHHHH-hCC-CEEEEcCchhcc
Confidence 52 1466777776 345 589999987644
No 339
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.69 E-value=0.00015 Score=64.05 Aligned_cols=112 Identities=17% Similarity=0.131 Sum_probs=75.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhcccc---CCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
++|.|+|++|.+|++++-.|+..| .++++++++ ..+....+ ......+.... . .+++.+.+++ .|+||.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~-~~~~y~~~~d-aDivvi 74 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--G-PEELKKALKG-ADVVVI 74 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--C-CCchHHhcCC-CCEEEE
Confidence 589999999999999999999888 478888876 22211111 11111111110 1 1236678889 999999
Q ss_pred ccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCC-CEEEEecccc
Q 022216 142 ATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV-NRFILISSIL 184 (301)
Q Consensus 142 ~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iV~~SS~~ 184 (301)
+||... .++....++.|..-...+++..++++. ..+|.+|...
T Consensus 75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 120 (310)
T cd01337 75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPV 120 (310)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence 999743 345566778999999999999988874 3566666543
No 340
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.68 E-value=0.00011 Score=65.16 Aligned_cols=108 Identities=17% Similarity=0.194 Sum_probs=75.6
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCCchhhhccccC------CCCeEEEEccCCCChHhHHHHhcCCC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKD------NPSLQIVKADVTEGSAKLSEAIGDDS 136 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~ 136 (301)
++++|.|+|+ |.+|..++-.|+..|. ++++++++.+.+.....+. ..++.+.. .+ .+.+++ .
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~-----~~~~~~-a 74 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD-----YSDCKD-A 74 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC-----HHHhCC-C
Confidence 4679999998 9999999999999986 7998898776644322111 01222221 11 345788 9
Q ss_pred CEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCCC-EEEEecc
Q 022216 137 EAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (301)
Q Consensus 137 d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS 182 (301)
|+||.+||... ..+....++.|..-...+++.+++.+.+ .+|.+|-
T Consensus 75 divIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN 123 (315)
T PRK00066 75 DLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN 123 (315)
T ss_pred CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 99999999743 3445566788988888989988887653 5555554
No 341
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.60 E-value=0.00099 Score=49.88 Aligned_cols=92 Identities=26% Similarity=0.349 Sum_probs=66.9
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHH-hcCCCCEEEEccCCCC
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGFQP 147 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~~~d~Vi~~Ag~~~ 147 (301)
|+|.|. |.+|..+++.|.+.+.+|+++.++++..+++.. .++.++.+|.+| .+.+.++ +.+ .+.||-+..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~---~~~~~i~gd~~~-~~~l~~a~i~~-a~~vv~~~~--- 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE---EGVEVIYGDATD-PEVLERAGIEK-ADAVVILTD--- 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH---TTSEEEES-TTS-HHHHHHTTGGC-ESEEEEESS---
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh---cccccccccchh-hhHHhhcCccc-cCEEEEccC---
Confidence 678887 799999999999977799999999887776653 458899999999 7777765 344 888887764
Q ss_pred CCCCCCceeeehHHHHHHHHHHHHcC-CCEEEE
Q 022216 148 GWDLFAPWKVDNFGTVNLVEACRKRG-VNRFIL 179 (301)
Q Consensus 148 ~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iV~ 179 (301)
|-.....++..+++.+ ..+++.
T Consensus 72 ----------~d~~n~~~~~~~r~~~~~~~ii~ 94 (116)
T PF02254_consen 72 ----------DDEENLLIALLARELNPDIRIIA 94 (116)
T ss_dssp ----------SHHHHHHHHHHHHHHTTTSEEEE
T ss_pred ----------CHHHHHHHHHHHHHHCCCCeEEE
Confidence 2233455677777644 345554
No 342
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.57 E-value=0.001 Score=56.37 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=69.0
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~ 116 (301)
..+++++|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +.+ +..+++.
T Consensus 17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~ 95 (228)
T cd00757 17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA 95 (228)
T ss_pred HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 3566889999996 9999999999999996 666665442111100 000 1234556
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+..+++ .+.+.+.+++ +|+||.|... ...-..+-++|.+.++ .+|+.+...
T Consensus 96 ~~~~i~--~~~~~~~~~~-~DvVi~~~d~-------------~~~r~~l~~~~~~~~i-p~i~~g~~g 146 (228)
T cd00757 96 YNERLD--AENAEELIAG-YDLVLDCTDN-------------FATRYLINDACVKLGK-PLVSGAVLG 146 (228)
T ss_pred ecceeC--HHHHHHHHhC-CCEEEEcCCC-------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 655663 3567777888 9999998741 2334567778888875 677765544
No 343
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.56 E-value=0.0014 Score=55.93 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=67.7
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~ 116 (301)
..+++.+|+|.|+ |++|..+++.|+..|. ++++++.+.-....+ +.+ +..+++.
T Consensus 20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~ 98 (240)
T TIGR02355 20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINP 98 (240)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 3567889999997 9999999999999996 677766654221110 000 1223344
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~ 186 (301)
+...++ .+.+.+.+.+ .|+||.+.. |...-..+-++|.+.++ .+|+.++...+
T Consensus 99 ~~~~i~--~~~~~~~~~~-~DlVvd~~D-------------~~~~r~~ln~~~~~~~i-p~v~~~~~g~~ 151 (240)
T TIGR02355 99 INAKLD--DAELAALIAE-HDIVVDCTD-------------NVEVRNQLNRQCFAAKV-PLVSGAAIRME 151 (240)
T ss_pred EeccCC--HHHHHHHhhc-CCEEEEcCC-------------CHHHHHHHHHHHHHcCC-CEEEEEecccE
Confidence 433333 2456667777 888888763 23334556788888875 67775554433
No 344
>PRK05442 malate dehydrogenase; Provisional
Probab=97.55 E-value=0.0005 Score=61.25 Aligned_cols=113 Identities=9% Similarity=0.066 Sum_probs=72.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEeCCch--hhhccccCCCCe-EEE-EccCCCChHhHHHHhcC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDK--AKTTLSKDNPSL-QIV-KADVTEGSAKLSEAIGD 134 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~-~~Dl~~~~~~~~~~~~~ 134 (301)
.++|.|+|++|.+|..++-.|+..|. +++++++++.. +.....+..... .+. ...++ ....+.+++
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~y~~~~d 80 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT---DDPNVAFKD 80 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe---cChHHHhCC
Confidence 56999999999999999999988763 68888875432 221111000000 000 00111 123567788
Q ss_pred CCCEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcC--CCEEEEecc
Q 022216 135 DSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRG--VNRFILISS 182 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iV~~SS 182 (301)
.|+||.+||... .++....++.|..-...+.+..+++. -..+|.+|.
T Consensus 81 -aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 81 -ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred -CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 999999999643 34555667889999999999998843 345666664
No 345
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.54 E-value=0.0002 Score=56.69 Aligned_cols=75 Identities=21% Similarity=0.309 Sum_probs=52.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+++++++|+|+ |.+|..+++.|++.| .+|++.+|++++.+++....... .+..+..+ ..+.+.+ +|+||++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~-~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL--GIAIAYLD----LEELLAE-ADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc--ccceeecc----hhhcccc-CCEEEeC
Confidence 45789999998 999999999999996 78999999887765543211111 11223334 2333677 9999999
Q ss_pred cCCC
Q 022216 143 TGFQ 146 (301)
Q Consensus 143 Ag~~ 146 (301)
....
T Consensus 89 ~~~~ 92 (155)
T cd01065 89 TPVG 92 (155)
T ss_pred cCCC
Confidence 8643
No 346
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.52 E-value=0.00021 Score=62.39 Aligned_cols=75 Identities=24% Similarity=0.351 Sum_probs=52.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.+++++++|+|+ |++|++++..|++.| .+|++..|+.++.+++........ .+..++ + ..+.+.+ .|+|||
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~~~-~----~~~~~~~-~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAELDL-E----LQEELAD-FDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceeecc-c----chhcccc-CCEEEE
Confidence 457899999997 999999999999999 799999999887765543211110 011111 1 2344566 999999
Q ss_pred ccCC
Q 022216 142 ATGF 145 (301)
Q Consensus 142 ~Ag~ 145 (301)
+...
T Consensus 192 aTp~ 195 (278)
T PRK00258 192 ATSA 195 (278)
T ss_pred CCcC
Confidence 8753
No 347
>PRK08223 hypothetical protein; Validated
Probab=97.52 E-value=0.0017 Score=56.39 Aligned_cols=107 Identities=12% Similarity=0.200 Sum_probs=69.3
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~ 116 (301)
..++..+|+|.|+ |++|..+++.|+..|. ++++++.+.-....+ ..+ ...+++.
T Consensus 23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~ 101 (287)
T PRK08223 23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRA 101 (287)
T ss_pred HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEE
Confidence 4567899999998 9999999999999996 677776653211110 000 2234555
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+...++. +.+.+.+++ +|+||.+.-. .++..-..+-++|++.++ .+|+.+...
T Consensus 102 ~~~~l~~--~n~~~ll~~-~DlVvD~~D~-----------~~~~~r~~ln~~c~~~~i-P~V~~~~~g 154 (287)
T PRK08223 102 FPEGIGK--ENADAFLDG-VDVYVDGLDF-----------FEFDARRLVFAACQQRGI-PALTAAPLG 154 (287)
T ss_pred EecccCc--cCHHHHHhC-CCEEEECCCC-----------CcHHHHHHHHHHHHHcCC-CEEEEeccC
Confidence 5555654 456777788 8988865421 122334667788888885 577765543
No 348
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.50 E-value=0.00061 Score=60.30 Aligned_cols=112 Identities=18% Similarity=0.161 Sum_probs=73.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCCchhhhc-cccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT-LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
+|.|+|++|.+|.+++-.|+..|. +++++++++...+.+ +........+.... + .+++.+.+++ .|+||.+||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~-~~~~~~~~~d-aDivvitaG 76 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--G-EEGLENALKG-ADVVVIPAG 76 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--C-CCchHHHcCC-CCEEEEeCC
Confidence 588999999999999999998874 788888766211110 00011111111100 1 1235678889 999999999
Q ss_pred CCC--CCCCCCceeeehHHHHHHHHHHHHcCCC-EEEEeccc
Q 022216 145 FQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISSI 183 (301)
Q Consensus 145 ~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS~ 183 (301)
... ..+....+..|..-...+.+..++.+.+ .+|.+|..
T Consensus 77 ~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNP 118 (312)
T TIGR01772 77 VPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNP 118 (312)
T ss_pred CCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 643 3455667788999889999999887643 55666554
No 349
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.50 E-value=0.0012 Score=61.66 Aligned_cols=104 Identities=21% Similarity=0.329 Sum_probs=73.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
...++++|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.. ...++.++.+|.++ .+.+.++--.+.|.||-+.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~-~~~~~~~i~gd~~~-~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE-ELPNTLVLHGDGTD-QELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HCCCCeEEECCCCC-HHHHHhcCCccCCEEEECC
Confidence 34689999998 999999999999999999999999877665443 22467889999999 6666554322389998654
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
.- + +.|+. ++..+++.+..++|.....
T Consensus 306 ~~----~-----~~n~~----~~~~~~~~~~~~ii~~~~~ 332 (453)
T PRK09496 306 ND----D-----EANIL----SSLLAKRLGAKKVIALVNR 332 (453)
T ss_pred CC----c-----HHHHH----HHHHHHHhCCCeEEEEECC
Confidence 31 1 23433 3445566666666665443
No 350
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.49 E-value=0.003 Score=47.85 Aligned_cols=94 Identities=21% Similarity=0.270 Sum_probs=55.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCc-hhhhccccCC--CCe-EEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLD-KAKTTLSKDN--PSL-QIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~-~~~~~~~~~~--~~~-~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+|.|+||||++|+.+++.|+++. .+++.+..+.. ....+....+ ... ....-| .+ . +.+.+ +|+||.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~-~----~~~~~-~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-AD-P----EELSD-VDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TS-G----HHHTT-ESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cc-h----hHhhc-CCEEEec
Confidence 68999999999999999999974 46555544433 2222111000 111 111112 23 2 23367 9999999
Q ss_pred cCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 143 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
.+ -.....+.+.+.+.|+ ++|=.|+.
T Consensus 74 ~~--------------~~~~~~~~~~~~~~g~-~ViD~s~~ 99 (121)
T PF01118_consen 74 LP--------------HGASKELAPKLLKAGI-KVIDLSGD 99 (121)
T ss_dssp SC--------------HHHHHHHHHHHHHTTS-EEEESSST
T ss_pred Cc--------------hhHHHHHHHHHhhCCc-EEEeCCHH
Confidence 74 2235667777777776 66666665
No 351
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.49 E-value=0.0019 Score=55.29 Aligned_cols=104 Identities=18% Similarity=0.240 Sum_probs=68.6
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhh----------------------cccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~----------------------~~~~--~~~~~~~ 116 (301)
..++.++|+|.|+ |++|.++++.|+..|. ++++++.+.-.... .+.+ +..+++.
T Consensus 28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~ 106 (245)
T PRK05690 28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET 106 (245)
T ss_pred HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence 4567899999998 9999999999999996 67777654311110 0001 2234555
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+...+++ +.+.+.+++ +|+||.+.. |...-..+-++|++.++ .+|+.++.
T Consensus 107 ~~~~i~~--~~~~~~~~~-~DiVi~~~D-------------~~~~r~~ln~~~~~~~i-p~v~~~~~ 156 (245)
T PRK05690 107 INARLDD--DELAALIAG-HDLVLDCTD-------------NVATRNQLNRACFAAKK-PLVSGAAI 156 (245)
T ss_pred EeccCCH--HHHHHHHhc-CCEEEecCC-------------CHHHHHHHHHHHHHhCC-EEEEeeec
Confidence 5555543 456777888 999998863 23334557778888874 57765444
No 352
>PRK08328 hypothetical protein; Provisional
Probab=97.49 E-value=0.0022 Score=54.42 Aligned_cols=109 Identities=14% Similarity=0.167 Sum_probs=69.3
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhcc-----------------------cc--CCCCeE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTL-----------------------SK--DNPSLQ 115 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~-----------------------~~--~~~~~~ 115 (301)
..+++.+|+|.|+ |++|.++++.|+..|. ++++++.+.-+...+. .. +...+.
T Consensus 23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~ 101 (231)
T PRK08328 23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIE 101 (231)
T ss_pred HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEE
Confidence 3556889999997 9999999999999996 6777765432111100 00 223344
Q ss_pred EEEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccc
Q 022216 116 IVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGA 188 (301)
Q Consensus 116 ~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~ 188 (301)
.+...++ ++.+.+.+++ .|+||.|.. |...-..+-++|++.++ .+|+.++...||.
T Consensus 102 ~~~~~~~--~~~~~~~l~~-~D~Vid~~d-------------~~~~r~~l~~~~~~~~i-p~i~g~~~g~~G~ 157 (231)
T PRK08328 102 TFVGRLS--EENIDEVLKG-VDVIVDCLD-------------NFETRYLLDDYAHKKGI-PLVHGAVEGTYGQ 157 (231)
T ss_pred EEeccCC--HHHHHHHHhc-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEeeccCEEE
Confidence 4444443 3456667777 888888763 22333455677888875 6787776655543
No 353
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.49 E-value=0.00041 Score=60.89 Aligned_cols=112 Identities=18% Similarity=0.194 Sum_probs=73.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhccccCCCCeEEEE--ccCCCChHhHHHHhcCCCCEEEEc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVK--ADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
++|.|+|+ |+||+.++-.|+..+ .+++++++..+..+-...+......+.. ..+.. ... .+.+++ .|+||-+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~-~~~-y~~~~~-aDiVvit 76 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG-DGD-YEDLKG-ADIVVIT 76 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEec-CCC-hhhhcC-CCEEEEe
Confidence 57999999 999999999998876 3888888885443322211111111111 11111 011 456788 9999999
Q ss_pred cCCCC--CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 143 TGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 143 Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
||... ..+....++.|..-...+.+...+.+.+-++.+-|
T Consensus 77 AG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 77 AGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 98643 44566778899999999999998887644444443
No 354
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.46 E-value=0.0014 Score=59.85 Aligned_cols=104 Identities=20% Similarity=0.275 Sum_probs=67.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCC-------------------chhhhc---ccc--CCCCeEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL-------------------DKAKTT---LSK--DNPSLQIV 117 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~-------------------~~~~~~---~~~--~~~~~~~~ 117 (301)
.+++++|+|.|+ |++|.++++.|+..|. ++++++++. .+.+.. +.+ ....+..+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 457889999987 9999999999999997 788877762 111111 101 11234444
Q ss_pred EccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 118 ~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
...+++ +.+.+.+++ .|+||++.. |...-..+-++|++.++ .+|+.+...
T Consensus 211 ~~~~~~--~~~~~~~~~-~D~Vv~~~d-------------~~~~r~~ln~~~~~~~i-p~i~~~~~g 260 (376)
T PRK08762 211 QERVTS--DNVEALLQD-VDVVVDGAD-------------NFPTRYLLNDACVKLGK-PLVYGAVFR 260 (376)
T ss_pred eccCCh--HHHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 444443 456777888 999999863 12223457778888875 677765543
No 355
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.46 E-value=0.002 Score=53.90 Aligned_cols=105 Identities=23% Similarity=0.285 Sum_probs=67.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCC---chhhh------------------cccc--CCCCeEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKAKT------------------TLSK--DNPSLQIV 117 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~---~~~~~------------------~~~~--~~~~~~~~ 117 (301)
..++..+|+|.|+ |++|.++++.|+..|. ++++++.+. +.+.. .+.. ...+++.+
T Consensus 24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~ 102 (212)
T PRK08644 24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH 102 (212)
T ss_pred HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 3567889999997 9999999999999997 588877762 11110 0000 22344445
Q ss_pred EccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHc-CCCEEEEecccc
Q 022216 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSIL 184 (301)
Q Consensus 118 ~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~~ 184 (301)
...+++ +.+.+.+++ +|+||.|.. |...-..+.+.+.+. +. .+|+.+...
T Consensus 103 ~~~i~~--~~~~~~~~~-~DvVI~a~D-------------~~~~r~~l~~~~~~~~~~-p~I~~~~~~ 153 (212)
T PRK08644 103 NEKIDE--DNIEELFKD-CDIVVEAFD-------------NAETKAMLVETVLEHPGK-KLVAASGMA 153 (212)
T ss_pred eeecCH--HHHHHHHcC-CCEEEECCC-------------CHHHHHHHHHHHHHhCCC-CEEEeehhh
Confidence 555543 455667777 898888742 233345667777776 64 677665443
No 356
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.45 E-value=0.0031 Score=52.18 Aligned_cols=110 Identities=22% Similarity=0.361 Sum_probs=70.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc------------------------ccc--CCCCeE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT------------------------LSK--DNPSLQ 115 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~------------------------~~~--~~~~~~ 115 (301)
.+++.+|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +.+ +..+++
T Consensus 16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 456789999998 6699999999999996 577777653211110 000 223445
Q ss_pred EEEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccc
Q 022216 116 IVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGA 188 (301)
Q Consensus 116 ~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~ 188 (301)
.+..++.+..+...+.+++ +|+||.+-. |......+-+.|++.++ .+|+.++.+.||.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~-~dvVi~~~d-------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 152 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQK-FTLVIATEE-------------NYERTAKVNDVCRKHHI-PFISCATYGLIGY 152 (198)
T ss_pred EEecccccchhhHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence 5555554213445566777 888886632 23345667788888885 6888887766654
No 357
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.44 E-value=0.0018 Score=58.51 Aligned_cols=105 Identities=14% Similarity=0.116 Sum_probs=69.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~ 116 (301)
..+++.+|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +.+ +..+++.
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~ 102 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV 102 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence 4567899999998 9999999999999996 677777653111100 001 2234555
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+...++. +...+.+++ +|+||.+.. |...-..+-++|.+.++ .+|+.++..
T Consensus 103 ~~~~i~~--~~~~~~~~~-~DvVvd~~d-------------~~~~r~~~n~~c~~~~i-p~v~~~~~g 153 (355)
T PRK05597 103 SVRRLTW--SNALDELRD-ADVILDGSD-------------NFDTRHLASWAAARLGI-PHVWASILG 153 (355)
T ss_pred EEeecCH--HHHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEEec
Confidence 5556653 456677888 999998873 23333456677888775 577665543
No 358
>PRK04148 hypothetical protein; Provisional
Probab=97.43 E-value=0.00098 Score=51.07 Aligned_cols=94 Identities=19% Similarity=0.187 Sum_probs=70.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
+++++++.|. | .|.++++.|.+.|++|++++.++...+.... ..+.++.+|+.++.-++ .++ .|.|+-.
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~---~~~~~v~dDlf~p~~~~---y~~-a~liysi-- 84 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK---LGLNAFVDDLFNPNLEI---YKN-AKLIYSI-- 84 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH---hCCeEEECcCCCCCHHH---Hhc-CCEEEEe--
Confidence 4678999997 5 8999999999999999999999887665543 46799999999954444 445 8888754
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEe
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILI 180 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~ 180 (301)
.++.+ -...+++.+++.++.-+|..
T Consensus 85 -rpp~e----------l~~~~~~la~~~~~~~~i~~ 109 (134)
T PRK04148 85 -RPPRD----------LQPFILELAKKINVPLIIKP 109 (134)
T ss_pred -CCCHH----------HHHHHHHHHHHcCCCEEEEc
Confidence 22211 23568888999887666654
No 359
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.41 E-value=0.00066 Score=59.51 Aligned_cols=72 Identities=21% Similarity=0.276 Sum_probs=54.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
+.+.+++++|+|. |.+|+.+++.|.+.|.+|++..|+++....... .+...+ + .+.+.+.+.+ .|+||+
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~---~g~~~~-----~-~~~l~~~l~~-aDiVin 215 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE---MGLIPF-----P-LNKLEEKVAE-IDIVIN 215 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeee-----c-HHHHHHHhcc-CCEEEE
Confidence 3567899999998 889999999999999999999998766544321 122211 1 3446777888 999999
Q ss_pred ccC
Q 022216 142 ATG 144 (301)
Q Consensus 142 ~Ag 144 (301)
+..
T Consensus 216 t~P 218 (287)
T TIGR02853 216 TIP 218 (287)
T ss_pred CCC
Confidence 863
No 360
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.36 E-value=0.00035 Score=69.75 Aligned_cols=158 Identities=16% Similarity=0.192 Sum_probs=99.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEE-EEeCCchh--hh----ccccCCCCeEEEEccCCCChHhHHHHhcC--
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKA-GVRDLDKA--KT----TLSKDNPSLQIVKADVTEGSAKLSEAIGD-- 134 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~-~~r~~~~~--~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-- 134 (301)
-..|..+|+||-|+.|.+++..|.++|++-.+ ..|+.-+. +. .....+-.+.+-..|++. .+...+.+..
T Consensus 1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt-~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITT-AEGARGLIEESN 1844 (2376)
T ss_pred CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchh-hhhHHHHHHHhh
Confidence 34689999999999999999999999986444 46654321 10 111122334444466665 4444444432
Q ss_pred ---CCCEEEEccCCCCC--------CCCCCceeeehHHHHHHHHHHHHcC--CCEEEEecccccccccCCCCCCcchhhc
Q 022216 135 ---DSEAVVCATGFQPG--------WDLFAPWKVDNFGTVNLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFL 201 (301)
Q Consensus 135 ---~~d~Vi~~Ag~~~~--------~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~ 201 (301)
.+-.|||.|.+..+ +++...-+.-+.||.||=++.++.. .+-||..||.+.--.+.+
T Consensus 1845 kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~G---------- 1914 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAG---------- 1914 (2376)
T ss_pred hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCc----------
Confidence 47889999987543 2333334555667777777777654 468999999863211112
Q ss_pred chhhHHHHHHHHHHHHHH---HcCCcEEEEecCccc
Q 022216 202 NVFGLTLIAKLQAEQYIR---KSGINYTIIRPGGLR 234 (301)
Q Consensus 202 ~~~~~y~~sK~~~e~~~~---~~~i~~~~irpg~v~ 234 (301)
...||.+..++|+..+ ..|++-+.|.=|.|-
T Consensus 1915 --QtNYG~aNS~MERiceqRr~~GfPG~AiQWGAIG 1948 (2376)
T KOG1202|consen 1915 --QTNYGLANSAMERICEQRRHEGFPGTAIQWGAIG 1948 (2376)
T ss_pred --ccccchhhHHHHHHHHHhhhcCCCcceeeeeccc
Confidence 2456777778887764 368887777766543
No 361
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.36 E-value=0.0017 Score=58.21 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=63.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCC---CChHhHHHHhcCCCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT---EGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~d~Vi~ 141 (301)
.+.+|||+||+|++|..+++.+...|.+|+++.++.++.+.+.... ++..+ .|.. +..+.+.+....++|+||+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l--Ga~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d 227 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL--GFDDA-FNYKEEPDLDAALKRYFPNGIDIYFD 227 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCcee-EEcCCcccHHHHHHHhCCCCcEEEEE
Confidence 4789999999999999999988888999999888877655443211 12111 2222 1112333333224999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.|.. .....++.++.. ++++.++..
T Consensus 228 ~~g~~--------------~~~~~~~~l~~~--G~iv~~G~~ 253 (338)
T cd08295 228 NVGGK--------------MLDAVLLNMNLH--GRIAACGMI 253 (338)
T ss_pred CCCHH--------------HHHHHHHHhccC--cEEEEeccc
Confidence 87621 123445555544 588887754
No 362
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.35 E-value=0.0011 Score=59.80 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=61.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEeCCchhhhccccCCCCeEEE-EccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIV-KADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
+++|+|.||||++|+.+++.|++. +++++.+.++.+..+.+.. ....+..+ ..++.+ .+.. .+.+ +|+||.|.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~-~~~~~~~~~~~~~~~-~~~~--~~~~-vD~Vf~al 76 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSD-VHPHLRGLVDLVLEP-LDPE--ILAG-ADVVFLAL 76 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHH-hCcccccccCceeec-CCHH--HhcC-CCEEEECC
Confidence 478999999999999999999987 5788777664332221111 11112111 123333 2222 4466 99999987
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccc
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV 185 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~ 185 (301)
.. .....++.++.+.| .++|=.|+..-
T Consensus 77 P~--------------~~~~~~v~~a~~aG-~~VID~S~~fR 103 (343)
T PRK00436 77 PH--------------GVSMDLAPQLLEAG-VKVIDLSADFR 103 (343)
T ss_pred Cc--------------HHHHHHHHHHHhCC-CEEEECCcccC
Confidence 42 12456677776666 47888887653
No 363
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.35 E-value=0.0018 Score=57.76 Aligned_cols=100 Identities=15% Similarity=0.148 Sum_probs=62.8
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCC--Ch-HhHHHHhcCCCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GS-AKLSEAIGDDSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~-~~~~~~~~~~~d~Vi~ 141 (301)
.+.+|||+|++|.+|..+++.+...|.+|+++.++.++.+.+.. .+ +..+ .|..+ .. +.+.....+++|+|+.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lG--a~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d 213 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LG--FDVA-FNYKTVKSLEETLKKASPDGYDCYFD 213 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--CCEE-EeccccccHHHHHHHhCCCCeEEEEE
Confidence 47899999999999999998888889999988888766555432 22 2211 12222 01 2222222224999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+.|.. .....++.++.. +++|.++...
T Consensus 214 ~~G~~--------------~~~~~~~~l~~~--G~iv~~G~~~ 240 (325)
T TIGR02825 214 NVGGE--------------FSNTVIGQMKKF--GRIAICGAIS 240 (325)
T ss_pred CCCHH--------------HHHHHHHHhCcC--cEEEEecchh
Confidence 87631 123345555443 5898887653
No 364
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.32 E-value=0.0016 Score=58.28 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=63.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcC-CCCEEEEc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVCA 142 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~d~Vi~~ 142 (301)
+++|||+||+|++|...++.+.+.|+.+++...+.++.+.+.. ..... . .|..+ ..+.+.+...+ ++|+|+.+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~-lGAd~-v--i~y~~~~~~~~v~~~t~g~gvDvv~D~ 218 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE-LGADH-V--INYREEDFVEQVRELTGGKGVDVVLDT 218 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh-cCCCE-E--EcCCcccHHHHHHHHcCCCCceEEEEC
Confidence 7899999999999999998888889877777766666553322 22111 1 12333 12455555543 49999998
Q ss_pred cCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 143 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
.|... ....+++++.. ++++.++..+
T Consensus 219 vG~~~--------------~~~~l~~l~~~--G~lv~ig~~~ 244 (326)
T COG0604 219 VGGDT--------------FAASLAALAPG--GRLVSIGALS 244 (326)
T ss_pred CCHHH--------------HHHHHHHhccC--CEEEEEecCC
Confidence 76321 23345555544 6888887764
No 365
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.32 E-value=0.00047 Score=60.00 Aligned_cols=73 Identities=18% Similarity=0.273 Sum_probs=50.8
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCC--CCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.++++++|+|+ |++|++++..|++.|++|++..|+.++.+++..... ..+... ++.+ ..+.+ .|+||+
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~------~~~~~-~DivIn 184 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE------LPLHR-VDLIIN 184 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh------hcccC-ccEEEE
Confidence 35789999998 899999999999999999999998877665443211 111211 1111 12345 999999
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
+.+..
T Consensus 185 atp~g 189 (270)
T TIGR00507 185 ATSAG 189 (270)
T ss_pred CCCCC
Confidence 98753
No 366
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.32 E-value=0.0041 Score=51.47 Aligned_cols=76 Identities=17% Similarity=0.266 Sum_probs=53.8
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeC---Cchhhhc------------------ccc--CCCCeEEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRD---LDKAKTT------------------LSK--DNPSLQIVK 118 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~---~~~~~~~------------------~~~--~~~~~~~~~ 118 (301)
.++.++|+|.|+ |++|+.+++.|+..|. ++++.+++ .+.+... +.. ...++..+.
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~ 96 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD 96 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence 567889999998 9999999999999998 68888877 3322210 000 123455555
Q ss_pred ccCCCChHhHHHHhcCCCCEEEEc
Q 022216 119 ADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 119 ~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.+++. +.+.+.+++ +|+||.+
T Consensus 97 ~~i~~--~~~~~~~~~-~DlVi~a 117 (200)
T TIGR02354 97 EKITE--ENIDKFFKD-ADIVCEA 117 (200)
T ss_pred eeCCH--hHHHHHhcC-CCEEEEC
Confidence 66653 567777888 9999987
No 367
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.32 E-value=0.0011 Score=61.88 Aligned_cols=78 Identities=17% Similarity=0.142 Sum_probs=50.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc-CCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+++|+|+|||++| +|.++++.|++.|++|++.+++.......... ...++.+..++.. ..+. -.+ +|.||++
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~~--~~~-~d~vV~s 75 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP---LELL--DED-FDLMVKN 75 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC---HHHh--cCc-CCEEEEC
Confidence 4589999999966 99999999999999999988765322111100 1124444433221 1111 124 8999999
Q ss_pred cCCCCC
Q 022216 143 TGFQPG 148 (301)
Q Consensus 143 Ag~~~~ 148 (301)
+|+...
T Consensus 76 ~gi~~~ 81 (447)
T PRK02472 76 PGIPYT 81 (447)
T ss_pred CCCCCC
Confidence 997643
No 368
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.27 E-value=0.00047 Score=63.58 Aligned_cols=108 Identities=12% Similarity=0.083 Sum_probs=76.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHC-------CC--eEEEEEeCCchhhhccccCC-------CCeEEEEccCCCChHhHH
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAK-------GF--AVKAGVRDLDKAKTTLSKDN-------PSLQIVKADVTEGSAKLS 129 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~-------G~--~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~ 129 (301)
.-+|.|+|++|.+|.+++-.|+.. |. ++++++++.+.++....+.. .++.+.. + -.
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~----~----~y 171 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI----D----PY 171 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec----C----CH
Confidence 358999999999999999999987 64 78888888776554322111 1111111 1 24
Q ss_pred HHhcCCCCEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHH-cCC-CEEEEecc
Q 022216 130 EAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRK-RGV-NRFILISS 182 (301)
Q Consensus 130 ~~~~~~~d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~-~~~-~~iV~~SS 182 (301)
+.+++ .|+||.+||... ..+....++.|..-...+.+.+++ ++. ..+|.+|.
T Consensus 172 e~~kd-aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 172 EVFQD-AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred HHhCc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 56788 999999999743 344556678899999999999988 454 45666665
No 369
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.27 E-value=0.0069 Score=47.22 Aligned_cols=99 Identities=18% Similarity=0.263 Sum_probs=64.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhh----------------------cccc--CCCCeEEEEccCC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSK--DNPSLQIVKADVT 122 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~----------------------~~~~--~~~~~~~~~~Dl~ 122 (301)
+|+|.|+ |++|.++++.|+..|. ++++++.+.-.... ...+ +...+..+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 4899997 9999999999999997 68877655211110 0000 1234445555554
Q ss_pred CChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 123 EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 123 ~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+ ....+.+++ .|+||.|.. |......+.++|++.++ .+|..++..
T Consensus 80 ~--~~~~~~~~~-~diVi~~~d-------------~~~~~~~l~~~~~~~~i-~~i~~~~~g 124 (143)
T cd01483 80 E--DNLDDFLDG-VDLVIDAID-------------NIAVRRALNRACKELGI-PVIDAGGLG 124 (143)
T ss_pred h--hhHHHHhcC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence 4 234566777 999998863 23445678888988874 577766654
No 370
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.26 E-value=0.0014 Score=59.68 Aligned_cols=76 Identities=11% Similarity=0.161 Sum_probs=57.4
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
.+.+|+|.|+ |.+|..+++.|...|.+|++.+|++++.+.+...... .+..+..+ .+.+.+.+.+ .|+||++++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~---~v~~~~~~-~~~l~~~l~~-aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG---RIHTRYSN-AYEIEDAVKR-ADLLIGAVL 239 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc---eeEeccCC-HHHHHHHHcc-CCEEEEccc
Confidence 4678999988 9999999999999999999999987766544321111 12334555 6778888888 999999986
Q ss_pred CC
Q 022216 145 FQ 146 (301)
Q Consensus 145 ~~ 146 (301)
+.
T Consensus 240 ~~ 241 (370)
T TIGR00518 240 IP 241 (370)
T ss_pred cC
Confidence 53
No 371
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.26 E-value=0.0016 Score=58.68 Aligned_cols=99 Identities=18% Similarity=0.208 Sum_probs=59.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHC-CCeEEEE-EeCCchhhhccccCCCCeEEE-EccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDLDKAKTTLSKDNPSLQIV-KADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
++|.|.||||++|..+++.|.+. +.+++.+ .++.+..+.+.. ..+.+... ..++.+ ....+...+ +|+||.|.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~-~~~~l~~~~~~~~~~--~~~~~~~~~-~DvVf~al 76 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSE-VHPHLRGLVDLNLEP--IDEEEIAED-ADVVFLAL 76 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHH-hCccccccCCceeec--CCHHHhhcC-CCEEEECC
Confidence 47999999999999999999987 5677744 433322111110 01111111 112221 112333356 99999988
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+.. ....++..+.+.| .++|-.|+..
T Consensus 77 P~~--------------~s~~~~~~~~~~G-~~VIDlS~~f 102 (346)
T TIGR01850 77 PHG--------------VSAELAPELLAAG-VKVIDLSADF 102 (346)
T ss_pred Cch--------------HHHHHHHHHHhCC-CEEEeCChhh
Confidence 532 2566777777777 5888888864
No 372
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.26 E-value=0.00047 Score=57.12 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=50.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.++++|+++|+|. |.+|+++++.|.+.|++|++.+++++..++..... +...+ |. +.+.. .+ +|+++.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~--g~~~v--~~----~~l~~--~~-~Dv~vp 91 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELF--GATVV--AP----EEIYS--VD-ADVFAP 91 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc--CCEEE--cc----hhhcc--cc-CCEEEe
Confidence 4567999999998 79999999999999999999888876665544211 22221 11 11211 14 999998
Q ss_pred ccC
Q 022216 142 ATG 144 (301)
Q Consensus 142 ~Ag 144 (301)
||.
T Consensus 92 ~A~ 94 (200)
T cd01075 92 CAL 94 (200)
T ss_pred ccc
Confidence 874
No 373
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=97.25 E-value=0.0032 Score=57.80 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=69.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCch---hhh-------------------cccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AKT-------------------TLSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~---~~~-------------------~~~~--~~~~~~~ 116 (301)
..++..+|+|.|+ |++|.++++.|+..|. ++++++.+.-. +.. .+.+ ...++..
T Consensus 38 ~~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~ 116 (392)
T PRK07878 38 KRLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRL 116 (392)
T ss_pred HHHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEE
Confidence 3567889999997 9999999999999996 67766654311 110 0000 1223444
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~ 187 (301)
+...++. +...+.+++ +|+||.|.. |...-..+-++|.+.++ .+|+.+....+|
T Consensus 117 ~~~~i~~--~~~~~~~~~-~D~Vvd~~d-------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~~G 170 (392)
T PRK07878 117 HEFRLDP--SNAVELFSQ-YDLILDGTD-------------NFATRYLVNDAAVLAGK-PYVWGSIYRFEG 170 (392)
T ss_pred EeccCCh--hHHHHHHhc-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 5555553 456677888 999998762 23334456777888774 577766655544
No 374
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.25 E-value=0.00076 Score=59.03 Aligned_cols=77 Identities=17% Similarity=0.127 Sum_probs=53.5
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+++++++|.|+ |+.|++++..|++.|. +|+++.|+.++.+++............ +.. .+.+...+.+ .|+|||+
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~-~~~~~~~~~~-~DiVIna 197 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEG-DSGGLAIEKA-AEVLVST 197 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccc-hhhhhhcccC-CCEEEEC
Confidence 46889999997 9999999999999996 799999998887766532111111111 111 1234455567 9999999
Q ss_pred cCC
Q 022216 143 TGF 145 (301)
Q Consensus 143 Ag~ 145 (301)
...
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 754
No 375
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.23 E-value=0.0012 Score=58.52 Aligned_cols=105 Identities=15% Similarity=0.126 Sum_probs=69.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhh----ccccC--CCCeEEEEccCCCChHhHHHHhcCCCCE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKT----TLSKD--NPSLQIVKADVTEGSAKLSEAIGDDSEA 138 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~----~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 138 (301)
|+|.|.|+ |.+|..++..|+..| .+|++++++.+..+. +.... .....+.. .| .+.+++ .|+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d-----~~~l~~-aDi 70 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GD-----YADCKG-ADV 70 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CC-----HHHhCC-CCE
Confidence 47999998 999999999999999 589999998765442 11100 01111111 12 234788 999
Q ss_pred EEEccCCCCC--CCCCCceeeehHHHHHHHHHHHHcCCC-EEEEec
Q 022216 139 VVCATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVN-RFILIS 181 (301)
Q Consensus 139 Vi~~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~S 181 (301)
||.+++.... .+....+..|..-...+++.+++.+.+ .++.++
T Consensus 71 Viita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 71 VVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999986532 233344567777778888888777643 444443
No 376
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.22 E-value=0.0031 Score=55.96 Aligned_cols=96 Identities=21% Similarity=0.217 Sum_probs=65.9
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
.+++|+|+|+ |++|...++-+...|++|++++|++++.+.... . ..-.++... | ++...+.-+. +|++|.+++
T Consensus 166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l-GAd~~i~~~--~-~~~~~~~~~~-~d~ii~tv~ 238 (339)
T COG1064 166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L-GADHVINSS--D-SDALEAVKEI-ADAIIDTVG 238 (339)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h-CCcEEEEcC--C-chhhHHhHhh-CcEEEECCC
Confidence 3789999999 599998888888899999999999998765543 1 122222222 4 3444444444 999999987
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
... ....+++++.. ++++.++-.
T Consensus 239 -~~~-------------~~~~l~~l~~~--G~~v~vG~~ 261 (339)
T COG1064 239 -PAT-------------LEPSLKALRRG--GTLVLVGLP 261 (339)
T ss_pred -hhh-------------HHHHHHHHhcC--CEEEEECCC
Confidence 321 24456666654 588888765
No 377
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.22 E-value=0.00058 Score=59.17 Aligned_cols=112 Identities=18% Similarity=0.128 Sum_probs=71.9
Q ss_pred EEEEcCCchHHHHHHHHHHHCC----CeEEEEEeCCchhhhccccCCCCeEE-EEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 69 IFVAGATGSSGKRIVEQLLAKG----FAVKAGVRDLDKAKTTLSKDNPSLQI-VKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
|.|+||+|.+|..++..|+..| .+|+++++++++++....+...-... ....++- .+...+.+++ .|+||.++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~-~~d~~~~~~~-aDiVv~t~ 78 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI-TDDPYEAFKD-ADVVIITA 78 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE-CCchHHHhCC-CCEEEECC
Confidence 4799999999999999999998 68999998876654322110000000 0111111 1235677888 99999999
Q ss_pred CCCCCC--CCCCceeeehHHHHHHHHHHHHcCCC-EEEEecc
Q 022216 144 GFQPGW--DLFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (301)
Q Consensus 144 g~~~~~--~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS 182 (301)
|..... +.......|+.-...+++.+++.+.+ .+|.+|-
T Consensus 79 ~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tN 120 (263)
T cd00650 79 GVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSN 120 (263)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 865432 22334567777788888888877643 4555543
No 378
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.22 E-value=0.00055 Score=59.94 Aligned_cols=73 Identities=22% Similarity=0.318 Sum_probs=52.3
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCC---CCeEEEEccCCCChHhHHHHhcCCCCE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDN---PSLQIVKADVTEGSAKLSEAIGDDSEA 138 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 138 (301)
..++++|+|.|+ |+.|++++..|++.|. +|++++|+.++.+.+..... ....+.. . +.+.+.+.+ .|+
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~----~~~~~~~~~-aDi 195 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G----SDLAAALAA-ADG 195 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c----cchHhhhCC-CCE
Confidence 356789999998 9999999999999997 79999999887766543211 1122211 1 224455677 999
Q ss_pred EEEcc
Q 022216 139 VVCAT 143 (301)
Q Consensus 139 Vi~~A 143 (301)
|||+.
T Consensus 196 VInaT 200 (284)
T PRK12549 196 LVHAT 200 (284)
T ss_pred EEECC
Confidence 99994
No 379
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.22 E-value=0.0028 Score=56.73 Aligned_cols=94 Identities=22% Similarity=0.289 Sum_probs=57.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCe---EEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFA---VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+++|.|+||||++|.++++.|.++++. +..+ ++.++..+... ..+ ...++.+ .+.. .+.+ +|+||.+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v-~s~~~aG~~l~--~~~---~~l~~~~-~~~~--~~~~-vD~vFla 73 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLL-ASSESAGHSVP--FAG---KNLRVRE-VDSF--DFSQ-VQLAFFA 73 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEE-ECcccCCCeec--cCC---cceEEee-CChH--HhcC-CCEEEEc
Confidence 478999999999999999999987653 3333 33333222111 111 2234433 1211 2567 9999998
Q ss_pred cCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 143 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
++.. -...+++.+.+.|+ ++|=.|+..
T Consensus 74 ~p~~--------------~s~~~v~~~~~~G~-~VIDlS~~f 100 (336)
T PRK05671 74 AGAA--------------VSRSFAEKARAAGC-SVIDLSGAL 100 (336)
T ss_pred CCHH--------------HHHHHHHHHHHCCC-eEEECchhh
Confidence 7521 13457777777775 677777764
No 380
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.20 E-value=0.0071 Score=52.28 Aligned_cols=104 Identities=18% Similarity=0.210 Sum_probs=64.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhh----------------------ccccCCC--CeEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKT----------------------TLSKDNP--SLQIV 117 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~----------------------~~~~~~~--~~~~~ 117 (301)
.+++.+|+|.|+ |++|+++++.|+..| -++++++.+.-.... ......+ .++.+
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 467889999997 999999999999999 478887755311110 0001122 33333
Q ss_pred EccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 118 ~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
..-+ + .+.+.+.+..++|+||.+... +..-..+.+.|++.++ .+|..+..
T Consensus 106 ~~~i-~-~e~~~~ll~~~~D~VIdaiD~-------------~~~k~~L~~~c~~~~i-p~I~~gGa 155 (268)
T PRK15116 106 DDFI-T-PDNVAEYMSAGFSYVIDAIDS-------------VRPKAALIAYCRRNKI-PLVTTGGA 155 (268)
T ss_pred eccc-C-hhhHHHHhcCCCCEEEEcCCC-------------HHHHHHHHHHHHHcCC-CEEEECCc
Confidence 2222 2 345555554238988887642 3334568888888875 56655443
No 381
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.20 E-value=0.0036 Score=55.62 Aligned_cols=98 Identities=22% Similarity=0.285 Sum_probs=62.6
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
.+.+++|+|++|.+|..+++.+.+.|.+|+++.+++++.+.+.. ... -.++ |..+..+.+.+ +.+ +|+|++|+|
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~-~~~~--~~~~~~~~~~~-~~~-~d~v~~~~g 235 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LGA-DYVI--DGSKFSEDVKK-LGG-ADVVIELVG 235 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCC-cEEE--ecHHHHHHHHh-ccC-CCEEEECCC
Confidence 46799999999999999999999999999998887765544321 111 1112 21111222322 235 999999987
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
.. .....++.+... +++|.++...
T Consensus 236 ~~--------------~~~~~~~~~~~~--g~~v~~g~~~ 259 (332)
T cd08259 236 SP--------------TIEESLRSLNKG--GRLVLIGNVT 259 (332)
T ss_pred hH--------------HHHHHHHHhhcC--CEEEEEcCCC
Confidence 32 123344444443 5788887653
No 382
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.20 E-value=0.0016 Score=52.34 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=46.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
++.+++|+|.|+++.+|..+++.|.+.|.+|+++.|+. +.+.+.+.+ .|+||.+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-------------------------~~l~~~l~~-aDiVIsa 94 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-------------------------KNLKEHTKQ-ADIVIVA 94 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-------------------------hhHHHHHhh-CCEEEEc
Confidence 57899999999966689999999999999998887752 235567777 8999988
Q ss_pred cCC
Q 022216 143 TGF 145 (301)
Q Consensus 143 Ag~ 145 (301)
.+.
T Consensus 95 t~~ 97 (168)
T cd01080 95 VGK 97 (168)
T ss_pred CCC
Confidence 764
No 383
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.19 E-value=0.0051 Score=55.88 Aligned_cols=104 Identities=13% Similarity=0.210 Sum_probs=69.0
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCch---hhh-------------------cccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AKT-------------------TLSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~---~~~-------------------~~~~--~~~~~~~ 116 (301)
..++..+|+|.|+ |++|.++++.|+..|. ++++++.+.-. +.. .+.+ ...+++.
T Consensus 37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 4567889999998 9999999999999996 78887766311 110 0000 2234555
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+...++. +.+.+.+++ +|+||.|.. |...-..+-++|.+.++ .+|+.+..
T Consensus 116 ~~~~i~~--~~~~~~~~~-~DlVid~~D-------------n~~~r~~in~~~~~~~i-P~v~~~~~ 165 (370)
T PRK05600 116 LRERLTA--ENAVELLNG-VDLVLDGSD-------------SFATKFLVADAAEITGT-PLVWGTVL 165 (370)
T ss_pred eeeecCH--HHHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEEe
Confidence 5555543 567778888 999998863 23444556677787775 46665543
No 384
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.18 E-value=0.0032 Score=56.59 Aligned_cols=91 Identities=15% Similarity=0.216 Sum_probs=57.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCCeEE---EEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGFAVK---AGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
+|+|.||+|++|..+++.|.++|+.+. .+.+..+..+.+.. .+......|+.. +.+.+ +|+||.++|
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~---~~~~~~~~~~~~------~~~~~-~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTF---KGKELEVNEAKI------ESFEG-IDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeee---CCeeEEEEeCCh------HHhcC-CCEEEECCC
Confidence 489999999999999999999887643 44455443332221 223444555532 23467 999999987
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
.. -+..++..+.+.|+ ++|=.|+.
T Consensus 71 ~~--------------~s~~~a~~~~~~G~-~VID~ss~ 94 (339)
T TIGR01296 71 GS--------------VSKEFAPKAAKCGA-IVIDNTSA 94 (339)
T ss_pred HH--------------HHHHHHHHHHHCCC-EEEECCHH
Confidence 32 13445666666665 56655653
No 385
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.18 E-value=0.013 Score=49.70 Aligned_cols=103 Identities=21% Similarity=0.268 Sum_probs=64.3
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQIV 117 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~~ 117 (301)
.+++.+|+|.|. |++|+++++.|+..|. ++++++.+.-....+ +.+ +...++.+
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 456789999997 9999999999999996 777776543111000 000 12344444
Q ss_pred EccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 118 ~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
...++. +...+.+..++|+||.|.. |...-..+.+.|++.++ .+|...+
T Consensus 87 ~~~i~~--~~~~~l~~~~~D~VvdaiD-------------~~~~k~~L~~~c~~~~i-p~I~s~g 135 (231)
T cd00755 87 EEFLTP--DNSEDLLGGDPDFVVDAID-------------SIRAKVALIAYCRKRKI-PVISSMG 135 (231)
T ss_pred eeecCH--hHHHHHhcCCCCEEEEcCC-------------CHHHHHHHHHHHHHhCC-CEEEEeC
Confidence 444442 4455555323899998763 23445668888988875 4555433
No 386
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.18 E-value=0.0011 Score=61.10 Aligned_cols=75 Identities=17% Similarity=0.307 Sum_probs=57.0
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.+++++|+|.|+ |++|+.+++.|.+.|. ++++..|+.++.+.+..... ... ... .+.+.+.+.+ .|+||+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~-~~~-----~~~-~~~l~~~l~~-aDiVI~ 248 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR-NAS-----AHY-LSELPQLIKK-ADIIIA 248 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc-CCe-----Eec-HHHHHHHhcc-CCEEEE
Confidence 467899999998 9999999999999995 79998999887766553221 111 222 3456777888 999999
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
|.+..
T Consensus 249 aT~a~ 253 (414)
T PRK13940 249 AVNVL 253 (414)
T ss_pred CcCCC
Confidence 98754
No 387
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.17 E-value=0.0042 Score=55.22 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=65.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC--hHhHHHHhcC-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~-~~d~Vi~ 141 (301)
.+.+++|+|+++.+|..+++.+...|++|+++.++.++.+.+.. .. ... ..|..+. .+.+.+...+ ++|++++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~ 241 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LG--ADY-VIDYRKEDFVREVRELTGKRGVDVVVE 241 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--CCe-EEecCChHHHHHHHHHhCCCCCcEEEE
Confidence 46799999999999999999999999999998887765544321 11 111 1344441 1333333332 4999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
++|.. .....++.+++. ++++.+++..
T Consensus 242 ~~g~~--------------~~~~~~~~l~~~--G~~v~~~~~~ 268 (342)
T cd08266 242 HVGAA--------------TWEKSLKSLARG--GRLVTCGATT 268 (342)
T ss_pred CCcHH--------------HHHHHHHHhhcC--CEEEEEecCC
Confidence 98731 123344555543 6899998764
No 388
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.17 E-value=0.0012 Score=58.70 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=33.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhh
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK 104 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~ 104 (301)
++|.|+| .|.+|..++..|+++|++|++.+|+++..+
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~ 39 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAA 39 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHH
Confidence 5799999 599999999999999999999999876544
No 389
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.15 E-value=0.0074 Score=50.19 Aligned_cols=73 Identities=15% Similarity=0.249 Sum_probs=54.3
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
..+++++|||.|| |.+|..-++.|++.|++|++++..... +.++. ...++.++..+... . .+.+ .+.||
T Consensus 5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~--~~~~i~~~~~~~~~-~-----dl~~-~~lVi 74 (205)
T TIGR01470 5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA--EQGGITWLARCFDA-D-----ILEG-AFLVI 74 (205)
T ss_pred EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH--HcCCEEEEeCCCCH-H-----HhCC-cEEEE
Confidence 3567999999998 999999999999999999998765542 22222 23478888887764 2 2466 88888
Q ss_pred EccC
Q 022216 141 CATG 144 (301)
Q Consensus 141 ~~Ag 144 (301)
-+.+
T Consensus 75 ~at~ 78 (205)
T TIGR01470 75 AATD 78 (205)
T ss_pred ECCC
Confidence 6654
No 390
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=97.15 E-value=0.0068 Score=53.57 Aligned_cols=103 Identities=18% Similarity=0.209 Sum_probs=65.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEEEEccCC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQIVKADVT 122 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~~~~Dl~ 122 (301)
+|||.|+ |++|.++++.|+..|. ++++++.+.-....+ +.+ ....++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899997 9999999999999996 677776554221111 000 2234556666776
Q ss_pred CChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccccc
Q 022216 123 EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNG 187 (301)
Q Consensus 123 ~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~ 187 (301)
+ .....+.+++ .|+||.+.. |...-..+-+.|.+.++ .+|..++.+.+|
T Consensus 80 ~-~~~~~~f~~~-~DvVv~a~D-------------n~~ar~~in~~c~~~~i-p~I~~gt~G~~G 128 (312)
T cd01489 80 D-PDFNVEFFKQ-FDLVFNALD-------------NLAARRHVNKMCLAADV-PLIESGTTGFLG 128 (312)
T ss_pred C-ccchHHHHhc-CCEEEECCC-------------CHHHHHHHHHHHHHCCC-CEEEEecCccee
Confidence 5 3333456677 888887652 34445567777777774 566666555433
No 391
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=97.15 E-value=0.0093 Score=50.00 Aligned_cols=105 Identities=22% Similarity=0.298 Sum_probs=68.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCch-------hh---------------hccccCCCCeEEEEc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK-------AK---------------TTLSKDNPSLQIVKA 119 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~-------~~---------------~~~~~~~~~~~~~~~ 119 (301)
.++..+|+|.|. ||+|++++++|++.|. ++++++-+.-. .. +......+.+++-..
T Consensus 27 kl~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~ 105 (263)
T COG1179 27 KLKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAI 105 (263)
T ss_pred HHhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeeh
Confidence 456789999998 9999999999999996 67666544211 00 001112344444433
Q ss_pred c-CCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccc
Q 022216 120 D-VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV 185 (301)
Q Consensus 120 D-l~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~ 185 (301)
| .-. ++.+.+.+...+|+||.+.- |+..-..|+..|++++. -++||+++
T Consensus 106 ~~f~t-~en~~~~~~~~~DyvIDaiD-------------~v~~Kv~Li~~c~~~ki---~vIss~Ga 155 (263)
T COG1179 106 NDFIT-EENLEDLLSKGFDYVIDAID-------------SVRAKVALIAYCRRNKI---PVISSMGA 155 (263)
T ss_pred HhhhC-HhHHHHHhcCCCCEEEEchh-------------hhHHHHHHHHHHHHcCC---CEEeeccc
Confidence 3 233 56777777656999998762 34555778999998764 45666654
No 392
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.13 E-value=0.01 Score=48.98 Aligned_cols=108 Identities=20% Similarity=0.273 Sum_probs=67.7
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~ 116 (301)
..++.++|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +.+ +...++.
T Consensus 17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~ 95 (197)
T cd01492 17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV 95 (197)
T ss_pred HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence 3556889999997 6699999999999997 577776553211110 001 1223444
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGA 188 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~ 188 (301)
+...+.+ ...+.+++ +|+||.+.. |......+-++|++.++ .+|+.++..-||.
T Consensus 96 ~~~~~~~---~~~~~~~~-~dvVi~~~~-------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 149 (197)
T cd01492 96 DTDDISE---KPEEFFSQ-FDVVVATEL-------------SRAELVKINELCRKLGV-KFYATGVHGLFGF 149 (197)
T ss_pred EecCccc---cHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEecCCEEE
Confidence 4444433 23445677 888887642 23344667788888886 6788777665553
No 393
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.13 E-value=0.0026 Score=56.24 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=72.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCCchhhhcccc-------C-CCCeEEEEccCCCChHhHHHHhcCCCC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSK-------D-NPSLQIVKADVTEGSAKLSEAIGDDSE 137 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d 137 (301)
+|.|.|+ |.+|..++-.|+..|. ++++++.+.+..+....+ . ..++.+...| .+.+++ .|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~--------y~~~~~-aD 70 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD--------YDDCAD-AD 70 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC--------HHHhCC-CC
Confidence 5789998 9999999999998874 788888876544322111 1 1133333222 456788 99
Q ss_pred EEEEccCCCC--CCC--CCCceeeehHHHHHHHHHHHHcCCCEE-EEecc
Q 022216 138 AVVCATGFQP--GWD--LFAPWKVDNFGTVNLVEACRKRGVNRF-ILISS 182 (301)
Q Consensus 138 ~Vi~~Ag~~~--~~~--~~~~~~~N~~g~~~l~~a~~~~~~~~i-V~~SS 182 (301)
+||.+||... ..+ ....+..|..-...+.+.+++++..-+ |.+|-
T Consensus 71 ivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN 120 (307)
T cd05290 71 IIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITN 120 (307)
T ss_pred EEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 9999999643 233 256678899999999999998875444 44444
No 394
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.13 E-value=0.0021 Score=56.68 Aligned_cols=71 Identities=20% Similarity=0.323 Sum_probs=53.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.+.+++++|.|. |.+|+.++..|...|.+|++.+|+++..++... .+..++ + .+.+.+.+.+ .|+||++
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~---~G~~~~-----~-~~~l~~~l~~-aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE---MGLSPF-----H-LSELAEEVGK-IDIIFNT 217 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---cCCeee-----c-HHHHHHHhCC-CCEEEEC
Confidence 356899999997 889999999999999999999998766544322 223322 1 2346677788 9999998
Q ss_pred cC
Q 022216 143 TG 144 (301)
Q Consensus 143 Ag 144 (301)
+.
T Consensus 218 ~p 219 (296)
T PRK08306 218 IP 219 (296)
T ss_pred CC
Confidence 63
No 395
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.13 E-value=0.0009 Score=63.71 Aligned_cols=44 Identities=30% Similarity=0.357 Sum_probs=38.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL 107 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~ 107 (301)
.+++|+++|+|+ |++|++++..|++.|++|+++.|+.++.+++.
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la 419 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELA 419 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 456899999999 89999999999999999999999877766654
No 396
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=97.12 E-value=0.0079 Score=50.99 Aligned_cols=102 Identities=15% Similarity=0.106 Sum_probs=64.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEEEEccCC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQIVKADVT 122 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~~~~Dl~ 122 (301)
+|||.|+ |++|.++++.|+..|. ++++++.+.-....+ ..+ ...++..+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 4889996 9999999999999996 677777653211100 000 2234566666775
Q ss_pred CChHhH-HHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccc
Q 022216 123 EGSAKL-SEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVN 186 (301)
Q Consensus 123 ~~~~~~-~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~ 186 (301)
+ .+.. .+.+++ +|+||.+.. |...-..+-+.|.+.++ .+|..++.+-+
T Consensus 80 ~-~~~~~~~f~~~-~DvVi~a~D-------------n~~aR~~ln~~c~~~~i-plI~~g~~G~~ 128 (234)
T cd01484 80 P-EQDFNDTFFEQ-FHIIVNALD-------------NIIARRYVNGMLIFLIV-PLIESGTEGFK 128 (234)
T ss_pred h-hhhchHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEcccCCc
Confidence 4 2222 345677 898888752 34445667777887774 57776665433
No 397
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.11 E-value=0.0038 Score=58.80 Aligned_cols=104 Identities=14% Similarity=0.107 Sum_probs=67.1
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC-------------h--HhHH
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-------------S--AKLS 129 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-------------~--~~~~ 129 (301)
.+.+|+|+|+ |.+|...+..+...|++|+++++++++++.... -+.+++..|..+. . +...
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes---lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES---MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---cCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 4789999998 999999999999999999999999888776543 3444433333210 1 1112
Q ss_pred HH----hcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 130 EA----IGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 130 ~~----~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
+. .++ +|+||.+++......+.. -+...++.+++. +.||.++.
T Consensus 240 ~~~~~~~~g-aDVVIetag~pg~~aP~l-------it~~~v~~mkpG--gvIVdvg~ 286 (509)
T PRK09424 240 ALFAEQAKE-VDIIITTALIPGKPAPKL-------ITAEMVASMKPG--SVIVDLAA 286 (509)
T ss_pred HHHHhccCC-CCEEEECCCCCcccCcch-------HHHHHHHhcCCC--CEEEEEcc
Confidence 22 345 999999998754322210 023444444432 57888875
No 398
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.10 E-value=0.00067 Score=57.08 Aligned_cols=40 Identities=40% Similarity=0.562 Sum_probs=35.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT 106 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~ 106 (301)
|+|.|+||+|.+|..+++.|++.|++|++..|++++.+.+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l 40 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEA 40 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHH
Confidence 5799999999999999999999999999999988776544
No 399
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.10 E-value=0.0018 Score=57.72 Aligned_cols=115 Identities=20% Similarity=0.145 Sum_probs=71.5
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
+.++|.|+|| |.+|..++..|+..| .++++++++++..+....+ ...........+.. ..... .+++ .|+||.
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~-~l~~-ADiVVi 79 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYE-DIKD-SDVVVI 79 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHH-HhCC-CCEEEE
Confidence 4679999997 999999999999988 6888888877543321110 00000000011110 11233 6788 999999
Q ss_pred ccCCCCC--CCCCCceeeehHHHHHHHHHHHHcCCCE-EEEeccc
Q 022216 142 ATGFQPG--WDLFAPWKVDNFGTVNLVEACRKRGVNR-FILISSI 183 (301)
Q Consensus 142 ~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~~~-iV~~SS~ 183 (301)
++|.... .+....+..|..-...+++.+.+.+.+- +|++|..
T Consensus 80 tag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP 124 (319)
T PTZ00117 80 TAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNP 124 (319)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 9986432 3334455667776777888887776444 6666653
No 400
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.08 E-value=0.0063 Score=46.31 Aligned_cols=92 Identities=20% Similarity=0.318 Sum_probs=57.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHH-CCCeEEEE-EeCCchhh-h----ccccCCCCeEEEEccCCCChHhHHHHhcCCCCEE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLA-KGFAVKAG-VRDLDKAK-T----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV 139 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~-~G~~V~~~-~r~~~~~~-~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 139 (301)
++|.|.|++|.+|+.+++.+.+ .|.++... +|+++... + +......++.+ .+++.+.+.. +|+|
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v--------~~~l~~~~~~-~DVv 71 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV--------TDDLEELLEE-ADVV 71 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE--------BS-HHHHTTH--SEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc--------chhHHHhccc-CCEE
Confidence 4799999999999999999999 57887665 44442211 1 10000111111 2457778888 9999
Q ss_pred EEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 140 VCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 140 i~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
|.+. +-.++...++.+.++++ .+|.-+|
T Consensus 72 IDfT--------------~p~~~~~~~~~~~~~g~-~~ViGTT 99 (124)
T PF01113_consen 72 IDFT--------------NPDAVYDNLEYALKHGV-PLVIGTT 99 (124)
T ss_dssp EEES---------------HHHHHHHHHHHHHHT--EEEEE-S
T ss_pred EEcC--------------ChHHhHHHHHHHHhCCC-CEEEECC
Confidence 9876 24557788888888875 5555444
No 401
>PRK07411 hypothetical protein; Validated
Probab=97.07 E-value=0.0066 Score=55.66 Aligned_cols=106 Identities=13% Similarity=0.132 Sum_probs=68.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhc----------------------ccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~ 116 (301)
..++..+|+|.|+ |++|.++++.|+..|. ++++++.+.-....+ +.+ ...+++.
T Consensus 34 ~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~ 112 (390)
T PRK07411 34 KRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL 112 (390)
T ss_pred HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence 4567889999998 9999999999999996 666666542111100 000 2235566
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV 185 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~ 185 (301)
+...++. +...+.+.+ .|+||.|.. |...-..+-++|.+.++ .+|+.+...-
T Consensus 113 ~~~~~~~--~~~~~~~~~-~D~Vvd~~d-------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~ 164 (390)
T PRK07411 113 YETRLSS--ENALDILAP-YDVVVDGTD-------------NFPTRYLVNDACVLLNK-PNVYGSIFRF 164 (390)
T ss_pred EecccCH--HhHHHHHhC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEEEccC
Confidence 6666654 456677888 999998863 23333556677777764 5666544433
No 402
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.07 E-value=0.0022 Score=56.88 Aligned_cols=113 Identities=18% Similarity=0.166 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhcccc--CCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+++|.|.|+ |.+|..++..++..|. +|++.+++++.......+ ...........++. .... +.+++ .|+||.+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d~-~~~~~-aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TNDY-EDIAG-SDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCCH-HHHCC-CCEEEEC
Confidence 479999999 9999999999999875 899999877654332211 00000000011111 0112 35788 9999999
Q ss_pred cCCCCCCC--CCCceeeehHHHHHHHHHHHHcCCC-EEEEecc
Q 022216 143 TGFQPGWD--LFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (301)
Q Consensus 143 Ag~~~~~~--~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS 182 (301)
+|.....+ ....+.-|+.-...+++.+.+...+ .+|+++.
T Consensus 78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN 120 (307)
T PRK06223 78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN 120 (307)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 98654222 1233346677677777777766543 4666554
No 403
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.06 E-value=0.0026 Score=57.19 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=51.1
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhc--C-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--D-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~-~~d~Vi~ 141 (301)
+++.|||.||+|++|++.++-+...|+..++..++.++.+-.+. . + .-...|..+ ++-++...+ + ++|+|+.
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-l--G-Ad~vvdy~~-~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-L--G-ADEVVDYKD-ENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-c--C-CcEeecCCC-HHHHHHHHhhcCCCccEEEE
Confidence 57899999999999999998888889544445666666554332 1 1 112356666 333333333 2 5999999
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
|.|-.
T Consensus 232 ~vg~~ 236 (347)
T KOG1198|consen 232 CVGGS 236 (347)
T ss_pred CCCCC
Confidence 99853
No 404
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.05 E-value=0.0012 Score=57.80 Aligned_cols=76 Identities=21% Similarity=0.295 Sum_probs=51.2
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCC--CeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNP--SLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
.++|+++|.|+ ||.|++++-.|++.|. +|+++.|+.++.+++...... +...+. ..+ ...+.+.+.. .|+||
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~-~~~~~~~~~~-~divI 199 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVD-ARGIEDVIAA-ADGVV 199 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecC-HhHHHHHHhh-cCEEE
Confidence 46789999998 9999999999999996 788889998877665432111 111111 112 1223334456 99999
Q ss_pred EccC
Q 022216 141 CATG 144 (301)
Q Consensus 141 ~~Ag 144 (301)
|+..
T Consensus 200 NaTp 203 (283)
T PRK14027 200 NATP 203 (283)
T ss_pred EcCC
Confidence 9864
No 405
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.02 E-value=0.0024 Score=57.27 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=61.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcCCCCEEEEcc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~Vi~~A 143 (301)
.+|||+||+|++|..+++.+...|+ +|+++.+++++.+.+.... ++..+ .|..+ ..+.+.+...+++|+||++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l--Ga~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~ 232 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL--GFDAA-INYKTDNVAERLRELCPEGVDVYFDNV 232 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc--CCcEE-EECCCCCHHHHHHHHCCCCceEEEECC
Confidence 7999999999999999988888898 7999888876655433211 22211 12222 12334333322499999988
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
|.. .....++.++.. +++|.++..
T Consensus 233 g~~--------------~~~~~~~~l~~~--G~iv~~G~~ 256 (345)
T cd08293 233 GGE--------------ISDTVISQMNEN--SHIILCGQI 256 (345)
T ss_pred CcH--------------HHHHHHHHhccC--CEEEEEeee
Confidence 631 123344555444 588887754
No 406
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.02 E-value=0.0064 Score=56.62 Aligned_cols=67 Identities=28% Similarity=0.353 Sum_probs=47.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
|+|.|.||.|.+|..+++.|.+.|++|++.+|+++...+.... .++. ..+ ...+.+.+ .|+||.+..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~--~gv~-----~~~---~~~e~~~~-aDvVIlavp 67 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE--LGVE-----YAN---DNIDAAKD-ADIVIISVP 67 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH--cCCe-----ecc---CHHHHhcc-CCEEEEecC
Confidence 5799999999999999999999999999999987664333211 1221 111 23445667 898888764
No 407
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.01 E-value=0.0027 Score=55.43 Aligned_cols=57 Identities=23% Similarity=0.325 Sum_probs=46.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
..+++|+|+|.|++|.+|+.++..|+++|++|+++.|+ ...+.+.+++ .|+||+
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~-------------------------t~~L~~~~~~-aDIvI~ 208 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR-------------------------TQNLPELVKQ-ADIIVG 208 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC-------------------------chhHHHHhcc-CCEEEE
Confidence 35689999999998889999999999999999886652 1234555677 999999
Q ss_pred ccC
Q 022216 142 ATG 144 (301)
Q Consensus 142 ~Ag 144 (301)
+.|
T Consensus 209 AtG 211 (283)
T PRK14192 209 AVG 211 (283)
T ss_pred ccC
Confidence 987
No 408
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.00 E-value=0.0011 Score=54.27 Aligned_cols=108 Identities=23% Similarity=0.217 Sum_probs=57.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCC------------ChHhHHHHhcC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE------------GSAKLSEAIGD 134 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~------------~~~~~~~~~~~ 134 (301)
|+|.|.|. |++|..++..|++.|++|++++.+++..+.+... ...+.+-.+.+ ......+++.+
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g---~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~ 76 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNG---ELPIYEPGLDELLKENVSAGRLRATTDIEEAIKD 76 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTT---SSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhc---cccccccchhhhhccccccccchhhhhhhhhhhc
Confidence 68889975 9999999999999999999999998876665431 11111100000 01223444555
Q ss_pred CCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHc-CCCEEEEeccc
Q 022216 135 DSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSI 183 (301)
Q Consensus 135 ~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~ 183 (301)
.|++|-|.+.....+. ..|.......++...+. ..+.+|.+-|+
T Consensus 77 -adv~~I~VpTP~~~~~----~~Dls~v~~a~~~i~~~l~~~~lvV~~ST 121 (185)
T PF03721_consen 77 -ADVVFICVPTPSDEDG----SPDLSYVESAIESIAPVLRPGDLVVIEST 121 (185)
T ss_dssp --SEEEE----EBETTT----SBETHHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred -cceEEEecCCCccccC----CccHHHHHHHHHHHHHHHhhcceEEEccE
Confidence 9999999875443321 23455555555555432 22456555554
No 409
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.00 E-value=0.012 Score=47.70 Aligned_cols=98 Identities=22% Similarity=0.262 Sum_probs=61.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCC---chhhh------------------cccc--CCCCeEEEEccCCC
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKAKT------------------TLSK--DNPSLQIVKADVTE 123 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~---~~~~~------------------~~~~--~~~~~~~~~~Dl~~ 123 (301)
+|+|.|+ |++|.++++.|+..|. ++++++.+. +.+.. .+.+ ...+++.+...++.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 4899997 9999999999999997 588888764 11110 0000 22344455555543
Q ss_pred ChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHc-CCCEEEEeccc
Q 022216 124 GSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKR-GVNRFILISSI 183 (301)
Q Consensus 124 ~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~ 183 (301)
+.+.+.+++ +|+||.+.. |...-..+.+.+.+. ++ .+|+.+..
T Consensus 80 --~~~~~~l~~-~DlVi~~~d-------------~~~~r~~i~~~~~~~~~i-p~i~~~~~ 123 (174)
T cd01487 80 --NNLEGLFGD-CDIVVEAFD-------------NAETKAMLAESLLGNKNK-PVVCASGM 123 (174)
T ss_pred --hhHHHHhcC-CCEEEECCC-------------CHHHHHHHHHHHHHHCCC-CEEEEehh
Confidence 456677788 999988742 223334567777665 53 56655433
No 410
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.98 E-value=0.0041 Score=53.05 Aligned_cols=113 Identities=20% Similarity=0.146 Sum_probs=70.6
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEE---EEEeCC-chhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVK---AGVRDL-DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~---~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
.+.+|.|.||+||||+.+...|... ..|. +-+... ......+. +-+-.......+- ++.+.+++++ .|+||
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~n-p~Vs~LaLYDi~~~~GVaaDlS--HI~T~s~V~g~~g-~~~L~~al~~-advVv 101 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLN-PLVSELALYDIANTPGVAADLS--HINTNSSVVGFTG-ADGLENALKG-ADVVV 101 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcC-cccceeeeeecccCCccccccc--ccCCCCceeccCC-hhHHHHHhcC-CCEEE
Confidence 4679999999999999998666543 3332 222211 11111110 1111111122222 5789999999 99999
Q ss_pred EccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCCC-EEEEecc
Q 022216 141 CATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (301)
Q Consensus 141 ~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS 182 (301)
--||+.. ....+..|++|..-...+..++.+...+ ++.++|.
T Consensus 102 IPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 102 IPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred ecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 9999754 3455677899999899999998877543 4555544
No 411
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=96.98 E-value=0.0026 Score=57.40 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=62.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCC---CChHhHHHHhcCCCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT---EGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~d~Vi~ 141 (301)
.+.+|||+|++|.+|..+++.+...|.+|++++++.++.+.+.... ++..+ .|.. +..+.+.+...+++|++|.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l--Ga~~v-i~~~~~~~~~~~i~~~~~~gvD~v~d 234 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--GFDEA-FNYKEEPDLDAALKRYFPEGIDIYFD 234 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc--CCCEE-EECCCcccHHHHHHHHCCCCcEEEEE
Confidence 4789999999999999999888888999998888776655432112 22211 1222 1112333332224999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.|.. .....++.++.. ++++.++..
T Consensus 235 ~vG~~--------------~~~~~~~~l~~~--G~iv~~G~~ 260 (348)
T PLN03154 235 NVGGD--------------MLDAALLNMKIH--GRIAVCGMV 260 (348)
T ss_pred CCCHH--------------HHHHHHHHhccC--CEEEEECcc
Confidence 88621 123344444443 588887654
No 412
>PLN02602 lactate dehydrogenase
Probab=96.98 E-value=0.0019 Score=58.14 Aligned_cols=107 Identities=16% Similarity=0.204 Sum_probs=71.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCCchhhhccccC------CCCeEEEEccCCCChHhHHHHhcCCCCE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKD------NPSLQIVKADVTEGSAKLSEAIGDDSEA 138 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 138 (301)
++|.|+|+ |.+|..++-.|+..|. ++++++++.+.+.....+. .... -+..+ .| .+.+++ .|+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~d-----y~~~~d-aDi 108 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TD-----YAVTAG-SDL 108 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CC-----HHHhCC-CCE
Confidence 69999996 9999999999998874 7888888776543322110 1112 12110 11 234788 999
Q ss_pred EEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCC-CEEEEecc
Q 022216 139 VVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV-NRFILISS 182 (301)
Q Consensus 139 Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iV~~SS 182 (301)
||.+||... ..+....+..|..-...+.+.+++.+. ..+|.+|-
T Consensus 109 VVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN 155 (350)
T PLN02602 109 CIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN 155 (350)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999999653 234445667788888888888888764 35666654
No 413
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.97 E-value=0.0015 Score=57.98 Aligned_cols=108 Identities=18% Similarity=0.164 Sum_probs=71.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCCchhhhcccc----C--CCCeEEEEccCCCChHhHHHHhcCCCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSK----D--NPSLQIVKADVTEGSAKLSEAIGDDSE 137 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~~~~~~~~----~--~~~~~~~~~Dl~~~~~~~~~~~~~~~d 137 (301)
.++|.|+|+ |.+|..++-.|+..|. ++++++++.+.+.....+ . .....+... .| . +.+++ .|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d----y-~~~~~-ad 73 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD----Y-SVTAN-SK 73 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC----H-HHhCC-CC
Confidence 468999996 9999999999998874 788888877544322111 0 011122210 12 2 23788 99
Q ss_pred EEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCC-CEEEEecc
Q 022216 138 AVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV-NRFILISS 182 (301)
Q Consensus 138 ~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iV~~SS 182 (301)
+||.+||... ..+....++.|..-...+.+.+++.+. ..+|.+|.
T Consensus 74 ivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 74 VVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence 9999999643 234445667888888888888888864 35666654
No 414
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.96 E-value=0.004 Score=57.63 Aligned_cols=42 Identities=17% Similarity=0.060 Sum_probs=37.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL 107 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~ 107 (301)
+.|+|.|.|. |++|..++..|+++|++|++.++++++.+.+.
T Consensus 2 ~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~ 43 (415)
T PRK11064 2 SFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTIN 43 (415)
T ss_pred CccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 3578999986 99999999999999999999999988877643
No 415
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.95 E-value=0.0007 Score=62.49 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHC---C----CeEEEEEeC--Cchhhhcccc-------CCCCeEEEEccCCCChHhHH
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAK---G----FAVKAGVRD--LDKAKTTLSK-------DNPSLQIVKADVTEGSAKLS 129 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~---G----~~V~~~~r~--~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~ 129 (301)
.-+|+||||+|.||.++.-.++.= | ..+++++.. .+.++....+ ...++.+. . + -.
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~---~----~~ 194 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T---D----LD 194 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E---C----CH
Confidence 458999999999999999998862 3 235555552 2322211110 11122222 1 2 25
Q ss_pred HHhcCCCCEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCC--CEEEEecc
Q 022216 130 EAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV--NRFILISS 182 (301)
Q Consensus 130 ~~~~~~~d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~--~~iV~~SS 182 (301)
+.|++ .|+||.+||... ..+....++.|..-...+.++..+... .+|+.+.|
T Consensus 195 ea~~d-aDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 195 VAFKD-AHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred HHhCC-CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 67888 999999999643 334556678888888889999888765 56766665
No 416
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.94 E-value=0.0019 Score=57.54 Aligned_cols=110 Identities=16% Similarity=0.154 Sum_probs=71.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhcccc-------CCCCeEEEEccCCCChHhHHHHhcCCC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDDS 136 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 136 (301)
+.++|.|.|+ |.+|..++..++..|. +|++++++++.......+ ......+.. -+| . +.+++ .
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d----~-~~l~~-a 75 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN----Y-EDIAG-S 75 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC----H-HHhCC-C
Confidence 4579999995 9999999999999995 888888887753211100 111122221 022 2 46788 9
Q ss_pred CEEEEccCCCCCC-------CCCCceeeehHHHHHHHHHHHHcCCC-EEEEeccc
Q 022216 137 EAVVCATGFQPGW-------DLFAPWKVDNFGTVNLVEACRKRGVN-RFILISSI 183 (301)
Q Consensus 137 d~Vi~~Ag~~~~~-------~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS~ 183 (301)
|+||.++|..... +....+..|..-...+++.+.+.+.+ .+|++|..
T Consensus 76 DiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP 130 (321)
T PTZ00082 76 DVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNP 130 (321)
T ss_pred CEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 9999999864321 12224456777777788888777654 67776654
No 417
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.94 E-value=0.0039 Score=58.09 Aligned_cols=76 Identities=12% Similarity=0.275 Sum_probs=53.6
Q ss_pred cccCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChH
Q 022216 63 SVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126 (301)
Q Consensus 63 ~~~~~~vlVtGa----------------tG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 126 (301)
.++||+||||+| ||-.|.++++++..+|++|+++.-.. .+. .+.++.++..+ . .+
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~-~~~-----~p~~v~~i~V~--t-a~ 323 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV-DLA-----DPQGVKVIHVE--S-AR 323 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc-CCC-----CCCCceEEEec--C-HH
Confidence 478999999976 79999999999999999999876332 211 23456666543 3 33
Q ss_pred hHHHHhcC--CCCEEEEccCCCC
Q 022216 127 KLSEAIGD--DSEAVVCATGFQP 147 (301)
Q Consensus 127 ~~~~~~~~--~~d~Vi~~Ag~~~ 147 (301)
+..+++.. +.|++|++|++..
T Consensus 324 eM~~av~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 324 QMLAAVEAALPADIAIFAAAVAD 346 (475)
T ss_pred HHHHHHHhhCCCCEEEEeccccc
Confidence 33333322 4799999999753
No 418
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.93 E-value=0.036 Score=51.84 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=26.6
Q ss_pred EEcCCchHHHHHHHHHHHCCCeEEEEEeCCc
Q 022216 71 VAGATGSSGKRIVEQLLAKGFAVKAGVRDLD 101 (301)
Q Consensus 71 VtGatG~iG~~~~~~l~~~G~~V~~~~r~~~ 101 (301)
|+||+|++|.++++.|...|++|+...+.+.
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~ 73 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGL 73 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCcccc
Confidence 7888899999999999999999998655433
No 419
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.88 E-value=0.0086 Score=54.10 Aligned_cols=37 Identities=30% Similarity=0.353 Sum_probs=30.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCch
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK 102 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~ 102 (301)
+++|+|+||+|++|+++++.|++... +++.+.++.+.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~ 40 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS 40 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence 47999999999999999999998764 88877565543
No 420
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.88 E-value=0.0066 Score=48.51 Aligned_cols=65 Identities=23% Similarity=0.311 Sum_probs=48.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
+++|.+.|- |-+|+.+++.|+++|++|++.+|++++.+++.. .++. . .++..++..+ .|+||-+-
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~g~~-----~---~~s~~e~~~~-~dvvi~~v 65 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE---AGAE-----V---ADSPAEAAEQ-ADVVILCV 65 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH---TTEE-----E---ESSHHHHHHH-BSEEEE-S
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH---hhhh-----h---hhhhhhHhhc-ccceEeec
Confidence 478999997 999999999999999999999999888877654 1211 1 2345566667 89999875
No 421
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.86 E-value=0.0057 Score=50.75 Aligned_cols=73 Identities=18% Similarity=0.275 Sum_probs=50.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch-hhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
.++++++|||.|| |-+|...++.|++.|++|+++.+.... +.++. ....+.+..-++.. ..+.+ .|+||
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~--~~~~i~~~~~~~~~------~~l~~-adlVi 75 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV--EEGKIRWKQKEFEP------SDIVD-AFLVI 75 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH--hCCCEEEEecCCCh------hhcCC-ceEEE
Confidence 4568999999998 999999999999999999998765432 23332 12345554433332 23456 88888
Q ss_pred EccC
Q 022216 141 CATG 144 (301)
Q Consensus 141 ~~Ag 144 (301)
-+.+
T Consensus 76 aaT~ 79 (202)
T PRK06718 76 AATN 79 (202)
T ss_pred EcCC
Confidence 7653
No 422
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.85 E-value=0.0046 Score=54.24 Aligned_cols=79 Identities=22% Similarity=0.287 Sum_probs=51.4
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCc---hhhhccccCCC--CeEEEEccCCCChHhHHHHhcCCC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD---KAKTTLSKDNP--SLQIVKADVTEGSAKLSEAIGDDS 136 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~ 136 (301)
+.++++++|.|+ ||.+++++-.|+..|. +|+++.|+.+ +.+++...... .......++.+ .+.+.+.+.+ .
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-a 197 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEALAS-A 197 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhh-hhhhhhhccc-C
Confidence 457899999997 8889999999999996 8999999854 44444321111 11111122222 2335556667 9
Q ss_pred CEEEEccC
Q 022216 137 EAVVCATG 144 (301)
Q Consensus 137 d~Vi~~Ag 144 (301)
|+|||+..
T Consensus 198 DivINaTp 205 (288)
T PRK12749 198 DILTNGTK 205 (288)
T ss_pred CEEEECCC
Confidence 99999864
No 423
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.85 E-value=0.0044 Score=55.10 Aligned_cols=100 Identities=19% Similarity=0.143 Sum_probs=63.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC--hHhHHHHhcCCCCEEEEc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~d~Vi~~ 142 (301)
.+.+|||+||+|.+|..+++.+...|.+|+++.+++++.+.+.. . ++..+ .|..++ .+.+.+...+++|+|+++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~--Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~ 218 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L--GFDAV-FNYKTVSLEEALKEAAPDGIDCYFDN 218 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCCEE-EeCCCccHHHHHHHHCCCCcEEEEEC
Confidence 47899999999999999999888899999988888776555432 2 22211 233221 133333322249999998
Q ss_pred cCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 143 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
.|.. .....++.++.. +++|.++...
T Consensus 219 ~g~~--------------~~~~~~~~l~~~--G~iv~~g~~~ 244 (329)
T cd08294 219 VGGE--------------FSSTVLSHMNDF--GRVAVCGSIS 244 (329)
T ss_pred CCHH--------------HHHHHHHhhccC--CEEEEEcchh
Confidence 7621 123344444443 5888887653
No 424
>PRK14851 hypothetical protein; Provisional
Probab=96.85 E-value=0.012 Score=57.52 Aligned_cols=104 Identities=13% Similarity=0.159 Sum_probs=68.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCC---chhhh-------------------ccc--cCCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKAKT-------------------TLS--KDNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~---~~~~~-------------------~~~--~~~~~~~~ 116 (301)
..+++.+|+|.|+ |++|.++++.|+..|. ++++++.+. +.+.. ... ....+++.
T Consensus 39 ~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~ 117 (679)
T PRK14851 39 ERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP 117 (679)
T ss_pred HHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 3567899999996 9999999999999997 666665442 11110 000 02346677
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEec
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILIS 181 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~S 181 (301)
+...+++ +.+.+.+.+ +|+||.+.-.. .+..-..+.+.|++.++ .+|+.+
T Consensus 118 ~~~~i~~--~n~~~~l~~-~DvVid~~D~~-----------~~~~r~~l~~~c~~~~i-P~i~~g 167 (679)
T PRK14851 118 FPAGINA--DNMDAFLDG-VDVVLDGLDFF-----------QFEIRRTLFNMAREKGI-PVITAG 167 (679)
T ss_pred EecCCCh--HHHHHHHhC-CCEEEECCCCC-----------cHHHHHHHHHHHHHCCC-CEEEee
Confidence 7777764 567788888 99999776210 12223457778888775 455544
No 425
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.84 E-value=0.0041 Score=54.96 Aligned_cols=105 Identities=21% Similarity=0.217 Sum_probs=71.0
Q ss_pred EEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhccccCC------CCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 69 IFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDN------PSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
|.|.|+ |++|..++-.|+..| .++++++++.+.......+.. ....+.. ++ . .+.+.+ .|+||
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~---~~---~-~~~l~~-aDiVI 71 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR---GG---D-YADAAD-ADIVV 71 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE---CC---C-HHHhCC-CCEEE
Confidence 468887 899999999999998 689999988776543322110 1111111 12 1 347788 99999
Q ss_pred EccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCCC-EEEEecc
Q 022216 141 CATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (301)
Q Consensus 141 ~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS 182 (301)
.+||... ..+....+..|+.-...+++.+++.+.+ .+|.+|.
T Consensus 72 itag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN 116 (300)
T cd00300 72 ITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN 116 (300)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 9999654 2344555677888888888888887643 5555554
No 426
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.84 E-value=0.0021 Score=55.93 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=66.8
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEE-ccCCCChHhHHHHhcCCCCEEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVK-ADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.++++++|.|| ||.+++++..|++.|. +|+++.|+.++.+++..........+. .++.+ .+... + .|+|||
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~-~~~~~----~-~dliIN 196 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD-LEGLE----E-ADLLIN 196 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc-ccccc----c-cCEEEE
Confidence 35799999998 9999999999999995 899999999887776532221111111 22222 11111 5 899999
Q ss_pred ccCC--CCCC-C----------CCCceeeehHH-HHHHHHHHHHcCCC
Q 022216 142 ATGF--QPGW-D----------LFAPWKVDNFG-TVNLVEACRKRGVN 175 (301)
Q Consensus 142 ~Ag~--~~~~-~----------~~~~~~~N~~g-~~~l~~a~~~~~~~ 175 (301)
+... .... + ..-.+|++..- ---+++.|++.|++
T Consensus 197 aTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~ 244 (283)
T COG0169 197 ATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK 244 (283)
T ss_pred CCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence 8643 2211 1 11234666553 34588888888864
No 427
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.84 E-value=0.007 Score=52.79 Aligned_cols=102 Identities=11% Similarity=0.106 Sum_probs=67.5
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
.|+++-|+|+.| +|.--++-..+.|++|+++++...+.++... ..+.+.+..-..| ++.+.++.+. .|.++|++-
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~--~LGAd~fv~~~~d-~d~~~~~~~~-~dg~~~~v~ 255 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK--SLGADVFVDSTED-PDIMKAIMKT-TDGGIDTVS 255 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH--hcCcceeEEecCC-HHHHHHHHHh-hcCcceeee
Confidence 589999999966 9986666666669999999998866665542 2344444433335 6777777766 777777664
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
..... ....+++.++.. +++|+++-..
T Consensus 256 ~~a~~-----------~~~~~~~~lk~~--Gt~V~vg~p~ 282 (360)
T KOG0023|consen 256 NLAEH-----------ALEPLLGLLKVN--GTLVLVGLPE 282 (360)
T ss_pred ecccc-----------chHHHHHHhhcC--CEEEEEeCcC
Confidence 21111 123456666665 5899988764
No 428
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.84 E-value=0.013 Score=42.98 Aligned_cols=91 Identities=20% Similarity=0.304 Sum_probs=58.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
+++++++|||+|+ |.+|..=++.|++.|++|+++.......+ ..+.+..-++ .+.+.+ .+.||-
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~-------~~i~~~~~~~-------~~~l~~-~~lV~~ 66 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSE-------GLIQLIRREF-------EEDLDG-ADLVFA 66 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHH-------TSCEEEESS--------GGGCTT-ESEEEE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhh-------hHHHHHhhhH-------HHHHhh-heEEEe
Confidence 3567999999998 99999999999999999999887751111 3344443322 233566 888885
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.+- -.-...+.+.|++.+ .+|++...
T Consensus 67 at~d-------------~~~n~~i~~~a~~~~--i~vn~~D~ 93 (103)
T PF13241_consen 67 ATDD-------------PELNEAIYADARARG--ILVNVVDD 93 (103)
T ss_dssp -SS--------------HHHHHHHHHHHHHTT--SEEEETT-
T ss_pred cCCC-------------HHHHHHHHHHHhhCC--EEEEECCC
Confidence 5431 122355777777765 57887664
No 429
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.83 E-value=0.0036 Score=58.11 Aligned_cols=73 Identities=26% Similarity=0.443 Sum_probs=54.3
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+.+++|+|.|+ |.+|..+++.|...|. +|++..|++++...+....+ . +..+ .+.+.+.+.+ .|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g--~-----~~~~-~~~~~~~l~~-aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG--G-----EAIP-LDELPEALAE-ADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC--C-----cEee-HHHHHHHhcc-CCEEEEC
Confidence 57899999997 9999999999999997 78888998877655443222 1 1222 2445667778 9999999
Q ss_pred cCCC
Q 022216 143 TGFQ 146 (301)
Q Consensus 143 Ag~~ 146 (301)
.+..
T Consensus 250 T~s~ 253 (423)
T PRK00045 250 TGAP 253 (423)
T ss_pred CCCC
Confidence 7643
No 430
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.83 E-value=0.0093 Score=57.91 Aligned_cols=90 Identities=21% Similarity=0.277 Sum_probs=68.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHH-hcCCCCEEEEccC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG 144 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~~~d~Vi~~Ag 144 (301)
..+|+|.|. |-+|+.+++.|.++|+++++++.+++..++... .+..++.+|.+| ++.++++ +.+ .|.||-+..
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~-~~~L~~agi~~-A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK---YGYKVYYGDATQ-LELLRAAGAEK-AEAIVITCN 473 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh---CCCeEEEeeCCC-HHHHHhcCCcc-CCEEEEEeC
Confidence 357999996 999999999999999999999999888776543 578899999999 6767665 334 888887653
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCC
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGV 174 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~ 174 (301)
- -.....+++.+++...
T Consensus 474 d-------------~~~n~~i~~~~r~~~p 490 (601)
T PRK03659 474 E-------------PEDTMKIVELCQQHFP 490 (601)
T ss_pred C-------------HHHHHHHHHHHHHHCC
Confidence 1 1224557777777643
No 431
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.81 E-value=0.0088 Score=57.61 Aligned_cols=72 Identities=15% Similarity=0.175 Sum_probs=58.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
.+++|.|. |-+|+++++.|.++|++|++++.++++.++... .+...+.+|.+| ++.++++--++.|.|+-+.
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~-~~~L~~a~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE---RGIRAVLGNAAN-EEIMQLAHLDCARWLLLTI 489 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---CCCeEEEcCCCC-HHHHHhcCccccCEEEEEc
Confidence 47899997 999999999999999999999999887766643 578999999999 6666654322388887654
No 432
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.81 E-value=0.021 Score=51.44 Aligned_cols=94 Identities=13% Similarity=0.193 Sum_probs=55.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC---eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.++|.|.||||++|.++++.|.++++ ++..+....+. .+.... .+......++. .+.+.+ +|+||.+
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~~--~~~~~~v~~~~------~~~~~~-~D~vf~a 76 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVTF--EGRDYTVEELT------EDSFDG-VDIALFS 76 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeeee--cCceeEEEeCC------HHHHcC-CCEEEEC
Confidence 57899999999999999999999776 34444322111 111110 11222222332 123467 9999988
Q ss_pred cCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 143 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
++.. .+..+...+.+.|+ ++|=.|+..
T Consensus 77 ~p~~--------------~s~~~~~~~~~~g~-~VIDlS~~f 103 (344)
T PLN02383 77 AGGS--------------ISKKFGPIAVDKGA-VVVDNSSAF 103 (344)
T ss_pred CCcH--------------HHHHHHHHHHhCCC-EEEECCchh
Confidence 8532 13445555555554 677777654
No 433
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=96.81 E-value=0.005 Score=54.19 Aligned_cols=76 Identities=14% Similarity=0.192 Sum_probs=52.4
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC--hHhHHHHhcC-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~-~~d~Vi~ 141 (301)
++++++|+|++|.+|..+++.+.+.|.+|+++.++.++.+.+.. . ++..+ .|..+. .+.+.+...+ ++|.+++
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~ 219 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-A--GADAV-FNYRAEDLADRILAATAGQGVDVIIE 219 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCCEE-EeCCCcCHHHHHHHHcCCCceEEEEE
Confidence 57899999999999999999999999999999887766554422 1 22211 233331 1334343332 5999999
Q ss_pred ccC
Q 022216 142 ATG 144 (301)
Q Consensus 142 ~Ag 144 (301)
+++
T Consensus 220 ~~~ 222 (325)
T cd08253 220 VLA 222 (325)
T ss_pred CCc
Confidence 986
No 434
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=96.81 E-value=0.0059 Score=54.05 Aligned_cols=113 Identities=16% Similarity=0.068 Sum_probs=69.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccc-cCCCC-eEEEEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLS-KDNPS-LQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
++|.|.|+ |.+|..++..|+..|. +|+++++..+....... ..... .......++- ..+..+ +.+ .|+||.++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d~~~-~~~-aDiVIita 77 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNNYAD-TAN-SDIVVITA 77 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCCHHH-hCC-CCEEEEcC
Confidence 57999997 9999999999999886 89988886553321110 00000 0000111210 112333 677 99999999
Q ss_pred CCCCCC--CCCCceeeehHHHHHHHHHHHHcCC-CEEEEeccc
Q 022216 144 GFQPGW--DLFAPWKVDNFGTVNLVEACRKRGV-NRFILISSI 183 (301)
Q Consensus 144 g~~~~~--~~~~~~~~N~~g~~~l~~a~~~~~~-~~iV~~SS~ 183 (301)
|..... +....+..|..-...+++.+.+.+. ..+|.+|..
T Consensus 78 g~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP 120 (305)
T TIGR01763 78 GLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNP 120 (305)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 965432 2223456788888888888877653 356666653
No 435
>PLN00203 glutamyl-tRNA reductase
Probab=96.80 E-value=0.0036 Score=59.21 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=55.4
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+.+++|+|.|+ |.+|..+++.|...|. +|++..|+.++...+..... +......+ .+.+.+.+.+ .|+||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~-g~~i~~~~----~~dl~~al~~-aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP-DVEIIYKP----LDEMLACAAE-ADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC-CCceEeec----HhhHHHHHhc-CCEEEEc
Confidence 67899999998 9999999999999996 79999999888776653221 22211112 2345667778 9999998
Q ss_pred cCC
Q 022216 143 TGF 145 (301)
Q Consensus 143 Ag~ 145 (301)
.+.
T Consensus 337 T~s 339 (519)
T PLN00203 337 TSS 339 (519)
T ss_pred cCC
Confidence 753
No 436
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.77 E-value=0.0034 Score=49.67 Aligned_cols=71 Identities=28% Similarity=0.368 Sum_probs=47.6
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
..+.+|+++|+|- |.+|+.+|+.|...|.+|++..++|-..-+... .+.... .+.+++.. .|++|.
T Consensus 19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~---dGf~v~---------~~~~a~~~-adi~vt 84 (162)
T PF00670_consen 19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAM---DGFEVM---------TLEEALRD-ADIFVT 84 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH---TT-EEE----------HHHHTTT--SEEEE
T ss_pred eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhh---cCcEec---------CHHHHHhh-CCEEEE
Confidence 4567999999997 999999999999999999999988866544332 333322 25567778 999998
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
+.|..
T Consensus 85 aTG~~ 89 (162)
T PF00670_consen 85 ATGNK 89 (162)
T ss_dssp -SSSS
T ss_pred CCCCc
Confidence 87743
No 437
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.76 E-value=0.0098 Score=53.50 Aligned_cols=110 Identities=24% Similarity=0.193 Sum_probs=67.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCC----CCeE-EEEccCCC----ChHhHHHHhcCCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN----PSLQ-IVKADVTE----GSAKLSEAIGDDSE 137 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~-~~~~Dl~~----~~~~~~~~~~~~~d 137 (301)
|+|-|.| +|++|...+-.|++.||+|++++.++++.+.+..... ++++ +++-+..+ ......+++.+ .|
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~-ad 78 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKD-AD 78 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhc-CC
Confidence 6788998 5999999999999999999999999988776543211 1110 00000000 01345667778 99
Q ss_pred EEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCC-CEEEEecc
Q 022216 138 AVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGV-NRFILISS 182 (301)
Q Consensus 138 ~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iV~~SS 182 (301)
++|-+.|....++- ..++......++...+.-. .++|.+=|
T Consensus 79 v~fIavgTP~~~dg----~aDl~~V~ava~~i~~~~~~~~vvV~KS 120 (414)
T COG1004 79 VVFIAVGTPPDEDG----SADLSYVEAVAKDIGEILDGKAVVVIKS 120 (414)
T ss_pred EEEEEcCCCCCCCC----CccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence 99999987654321 2244445555555544322 25544444
No 438
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.75 E-value=0.0045 Score=55.00 Aligned_cols=73 Identities=27% Similarity=0.409 Sum_probs=54.1
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
+.+++|+|.|+ |.+|..+++.|.+.| .+|++..|++++..++....+. . ..+ .+.+.+.+.+ .|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~--~-----~~~-~~~~~~~l~~-aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG--N-----AVP-LDELLELLNE-ADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC--e-----EEe-HHHHHHHHhc-CCEEEEC
Confidence 46899999997 999999999999876 5788889988776655432221 2 222 2346667778 9999999
Q ss_pred cCCC
Q 022216 143 TGFQ 146 (301)
Q Consensus 143 Ag~~ 146 (301)
.+..
T Consensus 246 t~~~ 249 (311)
T cd05213 246 TGAP 249 (311)
T ss_pred CCCC
Confidence 8743
No 439
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.74 E-value=0.0036 Score=50.88 Aligned_cols=70 Identities=17% Similarity=0.211 Sum_probs=49.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
..+.+++|.|.|. |.||+++++.|..-|.+|++.+|.......... ..+ . ..++.+.+.+ .|+|+.
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~---~~~-----~----~~~l~ell~~-aDiv~~ 97 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE---FGV-----E----YVSLDELLAQ-ADIVSL 97 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH---TTE-----E----ESSHHHHHHH--SEEEE
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccc---ccc-----e----eeehhhhcch-hhhhhh
Confidence 4567999999996 999999999999999999999998765431110 111 1 2346777888 999988
Q ss_pred ccCC
Q 022216 142 ATGF 145 (301)
Q Consensus 142 ~Ag~ 145 (301)
+...
T Consensus 98 ~~pl 101 (178)
T PF02826_consen 98 HLPL 101 (178)
T ss_dssp -SSS
T ss_pred hhcc
Confidence 7653
No 440
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.74 E-value=0.0085 Score=47.59 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=46.9
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.++++++|+|.|| |-+|...++.|++.|++|+++. ++..+++.. ...+.+....+.. + -+.+ .|+||-
T Consensus 9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~--l~~i~~~~~~~~~--~----dl~~-a~lVia 76 (157)
T PRK06719 9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKE--LPYITWKQKTFSN--D----DIKD-AHLIYA 76 (157)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHh--ccCcEEEecccCh--h----cCCC-ceEEEE
Confidence 4678999999998 9999999999999999999874 333333321 1234443333332 1 2455 788876
Q ss_pred cc
Q 022216 142 AT 143 (301)
Q Consensus 142 ~A 143 (301)
+.
T Consensus 77 aT 78 (157)
T PRK06719 77 AT 78 (157)
T ss_pred CC
Confidence 54
No 441
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.73 E-value=0.0043 Score=56.60 Aligned_cols=74 Identities=30% Similarity=0.462 Sum_probs=59.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
+++++++||.|+ |-+|.-+++.|++.| .+|+++.|+.++..++....+ +++.. -+.+.+.+.+ .|+||.
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-------~~~~~-l~el~~~l~~-~DvVis 244 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-------AEAVA-LEELLEALAE-ADVVIS 244 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-------Ceeec-HHHHHHhhhh-CCEEEE
Confidence 378999999998 999999999999999 689999999998887664222 33333 4668888888 999999
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
+.|..
T Consensus 245 sTsa~ 249 (414)
T COG0373 245 STSAP 249 (414)
T ss_pred ecCCC
Confidence 87644
No 442
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=96.72 E-value=0.012 Score=50.28 Aligned_cols=99 Identities=19% Similarity=0.199 Sum_probs=61.7
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC--hHhHHHHhcC-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~-~~d~Vi~ 141 (301)
.+.+|||+|+++ +|..+++.+...|.+|+++.+++++.+.+.. .. .-.+ .|..+. .+.+. ...+ ++|++|+
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g-~~~~--~~~~~~~~~~~~~-~~~~~~~d~vi~ 207 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-LG-ADHV--IDYKEEDLEEELR-LTGGGGADVVID 207 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hC-Ccee--ccCCcCCHHHHHH-HhcCCCCCEEEE
Confidence 578999999988 9999999999999999998887665443321 11 1111 232221 12222 1221 5999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+++.. .....+++.++.. ++++.++...
T Consensus 208 ~~~~~-------------~~~~~~~~~l~~~--G~~v~~~~~~ 235 (271)
T cd05188 208 AVGGP-------------ETLAQALRLLRPG--GRIVVVGGTS 235 (271)
T ss_pred CCCCH-------------HHHHHHHHhcccC--CEEEEEccCC
Confidence 98632 1234445555443 5888887764
No 443
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=96.72 E-value=0.015 Score=50.39 Aligned_cols=105 Identities=17% Similarity=0.107 Sum_probs=69.7
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCC-CeEEEEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNP-SLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
.|.+|+|+||+|.+|+-+.+-..-+|++|+.+.-.+++..-+....+. .+.=++.+ |..+.+.+++.+.+|+.|-|.
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~--d~~~~L~~a~P~GIDvyfeNV 227 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE--DFAQALKEACPKGIDVYFENV 227 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc--cHHHHHHHHCCCCeEEEEEcC
Confidence 489999999999999976665555699999998888776655432211 11111111 223556666554699999998
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHc-C-CCEEEEeccccccccc
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKR-G-VNRFILISSILVNGAA 189 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~-~~~iV~~SS~~~~~~~ 189 (301)
|-. +++++... + ..||+..+-++.|...
T Consensus 228 Gg~------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 228 GGE------------------VLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred Cch------------------HHHHHHHhhccccceeeeeehhhcCCC
Confidence 742 34444221 1 3699999999988765
No 444
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.72 E-value=0.018 Score=49.67 Aligned_cols=66 Identities=24% Similarity=0.317 Sum_probs=43.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHC-CCeEEEEE-eCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAGV-RDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~-G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
++|.|+|++|.+|+.+++.+.+. +.+++.+. ++++..... -..++.. .+++.+.+.+ +|+||.++.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~----------~~~~i~~-~~dl~~ll~~-~DvVid~t~ 69 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ----------GALGVAI-TDDLEAVLAD-ADVLIDFTT 69 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc----------CCCCccc-cCCHHHhccC-CCEEEECCC
Confidence 68999999999999999998875 67877754 444332211 1112222 2345566667 999998873
No 445
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=96.71 E-value=0.0054 Score=53.88 Aligned_cols=77 Identities=14% Similarity=0.186 Sum_probs=51.9
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcC-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~d~Vi~ 141 (301)
++.+++|+|++|.+|..+++.+...|++|+++.++.++.+.+.. .. +.. ..|..+ ..+.+.+...+ ++|.+|+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g--~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LG--ADV-AINYRTEDFAEEVKEATGGRGVDVILD 214 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cC--CCE-EEeCCchhHHHHHHHHhCCCCeEEEEE
Confidence 46899999999999999999999999999998887665544321 11 111 122222 12334444432 4999999
Q ss_pred ccCC
Q 022216 142 ATGF 145 (301)
Q Consensus 142 ~Ag~ 145 (301)
++|.
T Consensus 215 ~~g~ 218 (323)
T cd05276 215 MVGG 218 (323)
T ss_pred CCch
Confidence 9873
No 446
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.71 E-value=0.0075 Score=52.49 Aligned_cols=58 Identities=21% Similarity=0.283 Sum_probs=48.2
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.++||+|+|+|.++.+|+.++..|.++|++|+++.++. ..+.+.+++ .|+||.+
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-------------------------~~l~~~~~~-ADIVIsA 208 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-------------------------KDMASYLKD-ADVIVSA 208 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------------------hhHHHHHhh-CCEEEEC
Confidence 57899999999999999999999999999999876531 135566777 9999998
Q ss_pred cCCC
Q 022216 143 TGFQ 146 (301)
Q Consensus 143 Ag~~ 146 (301)
.|..
T Consensus 209 vg~p 212 (286)
T PRK14175 209 VGKP 212 (286)
T ss_pred CCCC
Confidence 8754
No 447
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.70 E-value=0.017 Score=51.22 Aligned_cols=98 Identities=19% Similarity=0.134 Sum_probs=62.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC-hHhHHHHhcCCCCEEEEccC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~d~Vi~~Ag 144 (301)
+.+|+|.|++|.+|..+++.+.+.|.+|+++.+++++.+.... . ++..+ .|..+. .+.+.+.-+.++|+|+++.|
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g 222 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-L--GAKEV-IPREELQEESIKPLEKQRWAGAVDPVG 222 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-c--CCCEE-EcchhHHHHHHHhhccCCcCEEEECCc
Confidence 5799999999999999999999999999999888776654432 2 22211 122220 22233332124899999876
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
.. .....++.++.. +++|.++..
T Consensus 223 ~~--------------~~~~~~~~l~~~--G~~i~~g~~ 245 (326)
T cd08289 223 GK--------------TLAYLLSTLQYG--GSVAVSGLT 245 (326)
T ss_pred HH--------------HHHHHHHHhhcC--CEEEEEeec
Confidence 21 123345555444 588888764
No 448
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.70 E-value=0.0053 Score=56.82 Aligned_cols=74 Identities=27% Similarity=0.406 Sum_probs=54.6
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.+.+++|+|.|+ |.+|..+++.|.+.| .+|++..|+.++..++....+. ..+ + .+.+.+.+.+ .|+||.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~--~~i-----~-~~~l~~~l~~-aDvVi~ 246 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG--EAV-----K-FEDLEEYLAE-ADIVIS 246 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC--eEe-----e-HHHHHHHHhh-CCEEEE
Confidence 367899999997 999999999999999 7899999988776544421111 122 1 2356677778 999999
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
+.+..
T Consensus 247 aT~s~ 251 (417)
T TIGR01035 247 STGAP 251 (417)
T ss_pred CCCCC
Confidence 97643
No 449
>PRK06849 hypothetical protein; Provisional
Probab=96.69 E-value=0.0058 Score=56.05 Aligned_cols=79 Identities=8% Similarity=0.066 Sum_probs=50.4
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCCh---HhHHHHhcC-CCCEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS---AKLSEAIGD-DSEAVV 140 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~-~~d~Vi 140 (301)
++|+|||||++..+|..+++.|.++|++|++++..+........ .-.....+...-.|++ +.+.+.++. ++|+||
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI 81 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI 81 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 36899999999999999999999999999999877644322111 1122222211112211 444444444 699999
Q ss_pred EccC
Q 022216 141 CATG 144 (301)
Q Consensus 141 ~~Ag 144 (301)
-+..
T Consensus 82 P~~e 85 (389)
T PRK06849 82 PTCE 85 (389)
T ss_pred ECCh
Confidence 7654
No 450
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.69 E-value=0.023 Score=51.50 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=61.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
.+++|+|.|+ |.||..+++.+...|.+|++++.+.++..+...+. ++..+ .|..+ .+.+.+...+ +|+||.+.|
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~--Ga~~v-i~~~~-~~~~~~~~~~-~D~vid~~g 256 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL--GADSF-LVSTD-PEKMKAAIGT-MDYIIDTVS 256 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC--CCcEE-EcCCC-HHHHHhhcCC-CCEEEECCC
Confidence 4789999775 99999999988888999988777665543332112 22222 13333 3445555556 999999887
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
.. ......++.++.. +++|.++.
T Consensus 257 ~~-------------~~~~~~~~~l~~~--G~iv~vG~ 279 (360)
T PLN02586 257 AV-------------HALGPLLGLLKVN--GKLITLGL 279 (360)
T ss_pred CH-------------HHHHHHHHHhcCC--cEEEEeCC
Confidence 31 1123345555443 58888764
No 451
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=96.69 E-value=0.0025 Score=57.96 Aligned_cols=108 Identities=10% Similarity=0.058 Sum_probs=71.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCC-e----EEE--E--EeCCchhhhccccC-------CCCeEEEEccCCCChHhHH
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGF-A----VKA--G--VRDLDKAKTTLSKD-------NPSLQIVKADVTEGSAKLS 129 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~-~----V~~--~--~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~ 129 (301)
.-+|.|+|++|.+|.+++-.|+..|. . |.+ + +++.+.++....+. ..++.+.. + -.
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~----~----~y 115 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI----D----PY 115 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec----C----CH
Confidence 46999999999999999999998873 2 333 2 55555543322110 01111111 1 24
Q ss_pred HHhcCCCCEEEEccCCCC--CCCCCCceeeehHHHHHHHHHHHHcC-C-CEEEEecc
Q 022216 130 EAIGDDSEAVVCATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRG-V-NRFILISS 182 (301)
Q Consensus 130 ~~~~~~~d~Vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~-~-~~iV~~SS 182 (301)
+.+++ .|+||.+||... .++....++.|..-...+.+.++++. . .++|.+|.
T Consensus 116 ~~~kd-aDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 116 EVFED-ADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred HHhCC-CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 56788 999999999653 33455667889998999999998843 3 35666665
No 452
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.68 E-value=0.0023 Score=60.23 Aligned_cols=72 Identities=15% Similarity=0.176 Sum_probs=50.4
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.+++++++|+|+ |++|++++..|++.|++|++..|+.++.+++..... ... .++.+ +. .+.+ .|+||+|
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~--~~~--~~~~~----~~-~l~~-~DiVIna 397 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ--GKA--FPLES----LP-ELHR-IDIIINC 397 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--cce--echhH----hc-ccCC-CCEEEEc
Confidence 456899999996 899999999999999999988888776655432111 111 11222 11 2456 9999999
Q ss_pred cCC
Q 022216 143 TGF 145 (301)
Q Consensus 143 Ag~ 145 (301)
...
T Consensus 398 tP~ 400 (477)
T PRK09310 398 LPP 400 (477)
T ss_pred CCC
Confidence 753
No 453
>PRK14852 hypothetical protein; Provisional
Probab=96.66 E-value=0.02 Score=57.56 Aligned_cols=107 Identities=13% Similarity=0.109 Sum_probs=68.9
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCch---hhh-------------------cccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AKT-------------------TLSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~---~~~-------------------~~~~--~~~~~~~ 116 (301)
..++..+|+|.|. ||+|..+++.|+..|. ++++++.+.-. +.. ...+ ...+++.
T Consensus 328 ~kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~ 406 (989)
T PRK14852 328 RRLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS 406 (989)
T ss_pred HHHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence 3567899999996 9999999999999996 66666544211 110 0001 2335566
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+...++ .+.+.+.+++ +|+||.+.-.. ....-..+.+.|.+.++ .+|+.++..
T Consensus 407 ~~~~I~--~en~~~fl~~-~DiVVDa~D~~-----------~~~~rr~l~~~c~~~~I-P~I~ag~~G 459 (989)
T PRK14852 407 FPEGVA--AETIDAFLKD-VDLLVDGIDFF-----------ALDIRRRLFNRALELGI-PVITAGPLG 459 (989)
T ss_pred EecCCC--HHHHHHHhhC-CCEEEECCCCc-----------cHHHHHHHHHHHHHcCC-CEEEeeccc
Confidence 666664 3677888888 99999776211 12223566777887775 566665543
No 454
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.66 E-value=0.018 Score=52.06 Aligned_cols=99 Identities=14% Similarity=0.091 Sum_probs=61.9
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcC-CCCEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVV 140 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~d~Vi 140 (301)
.+.+|||.|+ |.+|..+++.+...|.+ |+++++++++.+.... . +... ..|..+ ..+.+.+...+ ++|+||
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~--Ga~~-~i~~~~~~~~~~i~~~~~~~g~d~vi 250 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-F--GATH-TVNSSGTDPVEAIRALTGGFGADVVI 250 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-c--CCce-EEcCCCcCHHHHHHHHhCCCCCCEEE
Confidence 4789999985 99999999988888985 8888887776554432 2 2221 123332 12344444443 499999
Q ss_pred EccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 141 CATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 141 ~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
.+.|.. ......++.++.. +++|.++..
T Consensus 251 d~~g~~-------------~~~~~~~~~~~~~--G~iv~~G~~ 278 (358)
T TIGR03451 251 DAVGRP-------------ETYKQAFYARDLA--GTVVLVGVP 278 (358)
T ss_pred ECCCCH-------------HHHHHHHHHhccC--CEEEEECCC
Confidence 998731 1123334444443 589888764
No 455
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=96.66 E-value=0.018 Score=51.71 Aligned_cols=96 Identities=14% Similarity=0.174 Sum_probs=60.8
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC--CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vi~ 141 (301)
.+++|+|+|+ |.+|...++.+...|. +|+++++++++.+.... . +...+ .|..+ . ++.+.... ++|+||.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-l--Ga~~v-i~~~~-~-~~~~~~~~~g~~D~vid 241 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-M--GADKL-VNPQN-D-DLDHYKAEKGYFDVSFE 241 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-c--CCcEE-ecCCc-c-cHHHHhccCCCCCEEEE
Confidence 5789999996 9999999988888898 68888888777654432 2 22221 23333 1 12222211 3899999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
++|.. ......+++++.. +++|.++.
T Consensus 242 ~~G~~-------------~~~~~~~~~l~~~--G~iv~~G~ 267 (343)
T PRK09880 242 VSGHP-------------SSINTCLEVTRAK--GVMVQVGM 267 (343)
T ss_pred CCCCH-------------HHHHHHHHHhhcC--CEEEEEcc
Confidence 98731 1123445555543 58888864
No 456
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.65 E-value=0.02 Score=50.89 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=62.4
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
++.+++|.|++|.+|..+++.+...|.+|+++.++.++.+.+.. .+.. .++..+-.+..+.+.+...+++|.|+++.|
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g 216 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCD-RPINYKTEDLGEVLKKEYPKGVDVVYESVG 216 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCc-eEEeCCCccHHHHHHHhcCCCCeEEEECCc
Confidence 47899999999999999999888999999998887765544322 2111 122211111012232222224999999876
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
.. .....++.++.. +++|.+++..
T Consensus 217 ~~--------------~~~~~~~~l~~~--g~~v~~g~~~ 240 (329)
T cd08250 217 GE--------------MFDTCVDNLALK--GRLIVIGFIS 240 (329)
T ss_pred HH--------------HHHHHHHHhccC--CeEEEEeccc
Confidence 21 123344444443 5899887764
No 457
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.62 E-value=0.0088 Score=54.92 Aligned_cols=69 Identities=25% Similarity=0.256 Sum_probs=51.8
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.+.+++|+|.|+ |.||+.+++.+...|.+|++.++++.++..... .++..+ + . .+.+.+ .|+||.+
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~---~G~~~~-----~-~---~e~v~~-aDVVI~a 264 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAM---EGYEVM-----T-M---EEAVKE-GDIFVTT 264 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh---cCCEEc-----c-H---HHHHcC-CCEEEEC
Confidence 357999999998 999999999999999999998888777654432 233222 2 1 245567 9999998
Q ss_pred cCC
Q 022216 143 TGF 145 (301)
Q Consensus 143 Ag~ 145 (301)
+|.
T Consensus 265 tG~ 267 (413)
T cd00401 265 TGN 267 (413)
T ss_pred CCC
Confidence 763
No 458
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=96.61 E-value=0.024 Score=49.17 Aligned_cols=105 Identities=20% Similarity=0.238 Sum_probs=62.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhcccc-------------------CCCCeEEEEccCC
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK-------------------DNPSLQIVKADVT 122 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~-------------------~~~~~~~~~~Dl~ 122 (301)
.+++.-|+|.|+ |++|++++..|++.|. ++.+++-++-++..+-.. ...-..+.+.|..
T Consensus 71 kl~~syVVVVG~-GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~skiaPw~eIdar 149 (430)
T KOG2018|consen 71 KLTNSYVVVVGA-GGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKIAPWCEIDAR 149 (430)
T ss_pred HhcCcEEEEEec-CchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhhCccceecHH
Confidence 356778999997 9999999999999996 666666554433322110 0011122222222
Q ss_pred CC---hHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 123 EG---SAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 123 ~~---~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
+. .++-.+.+.+++|.|+.|.- |+..-..|+++|..+|.+ .+||++
T Consensus 150 ~~l~~~~s~edll~gnPdFvvDciD-------------NidtKVdLL~y~~~~~l~---Viss~G 198 (430)
T KOG2018|consen 150 NMLWTSSSEEDLLSGNPDFVVDCID-------------NIDTKVDLLEYCYNHGLK---VISSTG 198 (430)
T ss_pred HhhcCCCchhhhhcCCCCeEeEhhh-------------hhhhhhHHHHHHHHcCCc---eEeccC
Confidence 20 12333333334788877752 566667899999998864 345544
No 459
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.58 E-value=0.017 Score=56.23 Aligned_cols=72 Identities=24% Similarity=0.314 Sum_probs=59.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHH-hcCCCCEEEEcc
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCAT 143 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~~~d~Vi~~A 143 (301)
.++|+|.|. |-+|+.+++.|.++|+++++++.+++..+.... .+..++.+|.+| ++.++++ +.+ .|.||.+.
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~-~~~L~~agi~~-A~~vvv~~ 472 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK---FGMKVFYGDATR-MDLLESAGAAK-AEVLINAI 472 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh---cCCeEEEEeCCC-HHHHHhcCCCc-CCEEEEEe
Confidence 468999997 999999999999999999999999888776643 578899999999 6666654 334 88888765
No 460
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.56 E-value=0.0087 Score=55.14 Aligned_cols=68 Identities=28% Similarity=0.257 Sum_probs=50.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.+.+++|+|+|. |.||+.+++.|...|.+|++.++++.+..+... .++. +.+ +.+++.+ .|+||.+
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~---~G~~-----v~~----l~eal~~-aDVVI~a 274 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM---DGFR-----VMT----MEEAAEL-GDIFVTA 274 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh---cCCE-----ecC----HHHHHhC-CCEEEEC
Confidence 457999999997 999999999999999999999888766543321 1222 222 3445667 9999987
Q ss_pred cC
Q 022216 143 TG 144 (301)
Q Consensus 143 Ag 144 (301)
.|
T Consensus 275 TG 276 (425)
T PRK05476 275 TG 276 (425)
T ss_pred CC
Confidence 75
No 461
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=96.54 E-value=0.0091 Score=53.05 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=62.4
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcCCCCEEEEc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~Vi~~ 142 (301)
++.+|||.|++|.+|..+++.+.+.|.+|+++.++.++.+.+...... -.++ |..+ ..+.+.+...+++|+++++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-~~~~--~~~~~~~~~~v~~~~~~~~d~vi~~ 221 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-DAAI--NYKTPDLAEALKEAAPDGIDVYFDN 221 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-ceEE--ecCChhHHHHHHHhccCCceEEEEc
Confidence 468999999999999999999999999999988877665543211111 1122 2222 0123333332249999998
Q ss_pred cCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccc
Q 022216 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSIL 184 (301)
Q Consensus 143 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~ 184 (301)
.|.. .....++.++.. +++|.+++..
T Consensus 222 ~g~~--------------~~~~~~~~l~~~--G~~v~~g~~~ 247 (329)
T cd05288 222 VGGE--------------ILDAALTLLNKG--GRIALCGAIS 247 (329)
T ss_pred chHH--------------HHHHHHHhcCCC--ceEEEEeecc
Confidence 8631 123344444433 5788887653
No 462
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=96.54 E-value=0.033 Score=50.85 Aligned_cols=97 Identities=19% Similarity=0.254 Sum_probs=62.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
.+.+|+|.|+ |.+|...++.+...|++|++++++.++..+...+ .++..+ .|..+ .+.+.+...+ +|+||.+.|
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~--lGa~~~-i~~~~-~~~v~~~~~~-~D~vid~~G 251 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR--LGADSF-LVTTD-SQKMKEAVGT-MDFIIDTVS 251 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh--CCCcEE-EcCcC-HHHHHHhhCC-CcEEEECCC
Confidence 4789999986 9999999998888999998887765543222211 222222 23333 3455555566 999999987
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
.. ......++.++.. ++++.++.
T Consensus 252 ~~-------------~~~~~~~~~l~~~--G~iv~vG~ 274 (375)
T PLN02178 252 AE-------------HALLPLFSLLKVS--GKLVALGL 274 (375)
T ss_pred cH-------------HHHHHHHHhhcCC--CEEEEEcc
Confidence 32 1123445555443 58888865
No 463
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.52 E-value=0.026 Score=52.76 Aligned_cols=76 Identities=21% Similarity=0.263 Sum_probs=52.6
Q ss_pred ccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCch--hhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 64 ~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
+.+|+|+|+|+ |++|.++++.|++.|++|.+.+..... ..++ .....++.++.+...+ ..+.+ .|.||.
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l-~~~~~gi~~~~g~~~~------~~~~~-~d~vv~ 73 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQI-GKMFDGLVFYTGRLKD------ALDNG-FDILAL 73 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHH-hhccCCcEEEeCCCCH------HHHhC-CCEEEE
Confidence 35789999998 699999999999999999998766543 1111 1111356665544322 13356 999999
Q ss_pred ccCCCCC
Q 022216 142 ATGFQPG 148 (301)
Q Consensus 142 ~Ag~~~~ 148 (301)
..|+.+.
T Consensus 74 spgi~~~ 80 (445)
T PRK04308 74 SPGISER 80 (445)
T ss_pred CCCCCCC
Confidence 9998753
No 464
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.51 E-value=0.01 Score=52.27 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=64.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEcc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT 143 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~A 143 (301)
++.+++|+|++|.+|..+++.+...|++|+++.++.++.+.+.. ... -.++..+..+..+.+.+...+ ++|++++++
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGA-AHVIVTDEEDLVAEVLRITGGKGVDVVFDPV 221 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCC-CEEEecCCccHHHHHHHHhCCCCceEEEECC
Confidence 46799999999999999999999999999999888766554421 111 122222222212334444432 499999988
Q ss_pred CCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 144 GFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 144 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.. .....++++... +++|.++..
T Consensus 222 ~~~--------------~~~~~~~~l~~~--g~~v~~g~~ 245 (328)
T cd08268 222 GGP--------------QFAKLADALAPG--GTLVVYGAL 245 (328)
T ss_pred chH--------------hHHHHHHhhccC--CEEEEEEeC
Confidence 631 123444544443 578877654
No 465
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.51 E-value=0.0083 Score=55.50 Aligned_cols=77 Identities=21% Similarity=0.273 Sum_probs=50.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCC----CCeEE-----E-EccCCCChHhHHHHhcCCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN----PSLQI-----V-KADVTEGSAKLSEAIGDDS 136 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~-----~-~~Dl~~~~~~~~~~~~~~~ 136 (301)
|+|.|.|. |.+|..++..|++.|++|++.++++++.+.+..... +++.- + .+.++- ..+..+++++ +
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~-~~~~~~~~~~-a 77 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRA-TTDYEDAIRD-A 77 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE-ECCHHHHHhh-C
Confidence 46889986 999999999999999999999999887766542110 00000 0 000110 1234455677 9
Q ss_pred CEEEEccCCC
Q 022216 137 EAVVCATGFQ 146 (301)
Q Consensus 137 d~Vi~~Ag~~ 146 (301)
|+||-|.+..
T Consensus 78 dvvii~vpt~ 87 (411)
T TIGR03026 78 DVIIICVPTP 87 (411)
T ss_pred CEEEEEeCCC
Confidence 9999988643
No 466
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.49 E-value=0.0067 Score=49.94 Aligned_cols=66 Identities=24% Similarity=0.227 Sum_probs=43.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhh-ccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEcc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT 143 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~A 143 (301)
|++.| ||+|.||..++++|++.|++|++..|+.++..+ ........ ++ ..+..++.+. .|+||...
T Consensus 2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-------i~--~~~~~dA~~~-aDVVvLAV 68 (211)
T COG2085 2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-------IT--GGSNEDAAAL-ADVVVLAV 68 (211)
T ss_pred cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-------cc--cCChHHHHhc-CCEEEEec
Confidence 45555 456999999999999999999998666654333 22212222 11 2345556677 89998765
No 467
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=96.46 E-value=0.027 Score=51.28 Aligned_cols=99 Identities=15% Similarity=0.091 Sum_probs=61.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcCCCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~Vi~ 141 (301)
.+.+|+|.|+ |.+|...++.+...|+ +|+++++++++.+.... . ++..+ .|..+ ..+.+.+...+++|+||.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~--Ga~~~-i~~~~~~~~~~i~~~~~~g~d~vid 265 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-L--GATAT-VNAGDPNAVEQVRELTGGGVDYAFE 265 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-c--CCceE-eCCCchhHHHHHHHHhCCCCCEEEE
Confidence 4689999985 9999999988888898 68888887776554322 2 22211 22222 123344433324999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.|.. ......++.++.. +++|.++..
T Consensus 266 ~~G~~-------------~~~~~~~~~l~~~--G~iv~~G~~ 292 (371)
T cd08281 266 MAGSV-------------PALETAYEITRRG--GTTVTAGLP 292 (371)
T ss_pred CCCCh-------------HHHHHHHHHHhcC--CEEEEEccC
Confidence 98732 1133445555544 588887654
No 468
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=96.45 E-value=0.029 Score=48.94 Aligned_cols=99 Identities=19% Similarity=0.180 Sum_probs=59.8
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA 142 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~ 142 (301)
.+.+|||.|+ |.||...++.+...|.+ |+++++++++.+.... . +...+ .|..+..+.+.+...+ .+|+||.+
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~-~--Ga~~~-i~~~~~~~~~~~~~~~~g~d~vid~ 194 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALS-F--GATAL-AEPEVLAERQGGLQNGRGVDVALEF 194 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-c--CCcEe-cCchhhHHHHHHHhCCCCCCEEEEC
Confidence 5789999987 99999999888888986 7777766665543321 1 22111 1222212333333332 49999999
Q ss_pred cCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 143 TGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 143 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
.|.. ......++.++.. ++++.++..
T Consensus 195 ~G~~-------------~~~~~~~~~l~~~--G~iv~~G~~ 220 (280)
T TIGR03366 195 SGAT-------------AAVRACLESLDVG--GTAVLAGSV 220 (280)
T ss_pred CCCh-------------HHHHHHHHHhcCC--CEEEEeccC
Confidence 8732 1123345555443 588888764
No 469
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=96.44 E-value=0.021 Score=53.63 Aligned_cols=113 Identities=15% Similarity=0.061 Sum_probs=68.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEeCCchhhhccccCCCCeEEEEccCCC-----------ChHhHHHHh
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE-----------GSAKLSEAI 132 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-----------~~~~~~~~~ 132 (301)
+|+|.|.|. |++|..++-.|++.| ++|+++++++++.+.+.... ..+..-++.+ ....+.+++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~---~~~~e~gl~ell~~~~~~~l~~t~~~~~~i 76 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQ---LPIYEPGLDEVVKQCRGKNLFFSTDVEKHV 76 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCC---CccCCCCHHHHHHHhhcCCEEEEcCHHHHH
Confidence 368999985 999999999999985 78999999988877654321 1111111100 012345566
Q ss_pred cCCCCEEEEccCCCCCCCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEeccc
Q 022216 133 GDDSEAVVCATGFQPGWDL-FAPWKVDNFGTVNLVEACRKR-GVNRFILISSI 183 (301)
Q Consensus 133 ~~~~d~Vi~~Ag~~~~~~~-~~~~~~N~~g~~~l~~a~~~~-~~~~iV~~SS~ 183 (301)
.+ .|++|-|.+.....+- ......++......++...+. ..+++|.+.|+
T Consensus 77 ~~-advi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~ST 128 (473)
T PLN02353 77 AE-ADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (473)
T ss_pred hc-CCEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCC
Confidence 77 9999999986543221 111234555555555555432 22456666554
No 470
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=96.42 E-value=0.051 Score=47.47 Aligned_cols=104 Identities=15% Similarity=0.256 Sum_probs=65.5
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhcc----------------------ccC--CCCeEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTL----------------------SKD--NPSLQIV 117 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~----------------------~~~--~~~~~~~ 117 (301)
.+...+|||.|+ |++|.++++-|+..|. ++++.+.+.-....+- .+. ..+++.+
T Consensus 16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~ 94 (286)
T cd01491 16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS 94 (286)
T ss_pred HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 456789999997 9999999999999997 5777665432211110 001 1223333
Q ss_pred EccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccc
Q 022216 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGA 188 (301)
Q Consensus 118 ~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~ 188 (301)
..+++ .+.+.+ .|+||.+.. |......+-++|++.++ .+|...+...+|.
T Consensus 95 ~~~~~------~~~l~~-fdvVV~~~~-------------~~~~~~~in~~c~~~~i-pfI~a~~~G~~G~ 144 (286)
T cd01491 95 TGPLT------TDELLK-FQVVVLTDA-------------SLEDQLKINEFCHSPGI-KFISADTRGLFGS 144 (286)
T ss_pred eccCC------HHHHhc-CCEEEEecC-------------CHHHHHHHHHHHHHcCC-EEEEEeccccEEE
Confidence 33221 234556 787777642 34445667788888875 7888887776654
No 471
>PRK07877 hypothetical protein; Provisional
Probab=96.42 E-value=0.03 Score=55.07 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=70.2
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEeCCc---hhhhc------------------ccc--CCCCeEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLD---KAKTT------------------LSK--DNPSLQI 116 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~---~~~~~------------------~~~--~~~~~~~ 116 (301)
..+++.+|+|.|. | +|+.++..|+..|. ++++++.+.- .+... ..+ ...+++.
T Consensus 103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~ 180 (722)
T PRK07877 103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV 180 (722)
T ss_pred HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence 4678899999999 7 99999999999994 7887776531 11110 000 2345666
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
+...++ .+.+.+.+++ +|+||.|.- |+..-..+-++|.+.++ -+|+-++
T Consensus 181 ~~~~i~--~~n~~~~l~~-~DlVvD~~D-------------~~~~R~~ln~~a~~~~i-P~i~~~~ 229 (722)
T PRK07877 181 FTDGLT--EDNVDAFLDG-LDVVVEECD-------------SLDVKVLLREAARARRI-PVLMATS 229 (722)
T ss_pred EeccCC--HHHHHHHhcC-CCEEEECCC-------------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence 666666 3678888888 999999872 34444556677888875 5666554
No 472
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.40 E-value=0.033 Score=49.82 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=62.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEeCCchhhhccccCCCCeEEEEccCCCC-hHhHHHHhcC-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~-~~d~Vi~ 141 (301)
.+.+|||+|+ |.+|..+++.+...|++ |+++.+++++.+.... . ++..+ .|..+. .+.+.+...+ ++|+||.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~-~--ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid 237 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKA-L--GADFV-INSGQDDVQEIRELTSGAGADVAIE 237 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h--CCCEE-EcCCcchHHHHHHHhCCCCCCEEEE
Confidence 4789999986 99999999998889998 9888887766554322 1 22211 233331 2334444443 5999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.|... .....++.++.. ++++.++..
T Consensus 238 ~~g~~~-------------~~~~~~~~l~~~--G~~v~~g~~ 264 (339)
T cd08239 238 CSGNTA-------------ARRLALEAVRPW--GRLVLVGEG 264 (339)
T ss_pred CCCCHH-------------HHHHHHHHhhcC--CEEEEEcCC
Confidence 987321 112345555544 588887753
No 473
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.39 E-value=0.077 Score=50.11 Aligned_cols=77 Identities=21% Similarity=0.246 Sum_probs=51.7
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhh-hcccc-CCCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK-TTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
.+++++|+|.|+ |++|.++++.|.++|++|++++++..... ..... ...++.++.++-.. ...+ +|.||
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------~~~~-~D~Vv 83 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------LPED-TDLVV 83 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------ccCC-CCEEE
Confidence 346789999997 99999999999999999999886543211 11000 12356665543211 2345 89999
Q ss_pred EccCCCCC
Q 022216 141 CATGFQPG 148 (301)
Q Consensus 141 ~~Ag~~~~ 148 (301)
...|+.+.
T Consensus 84 ~s~Gi~~~ 91 (480)
T PRK01438 84 TSPGWRPD 91 (480)
T ss_pred ECCCcCCC
Confidence 99987653
No 474
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.35 E-value=0.024 Score=53.38 Aligned_cols=105 Identities=13% Similarity=0.127 Sum_probs=67.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC-------------h------
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-------------S------ 125 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-------------~------ 125 (301)
.+.+++|.|+ |.+|...+..+...|..|++++++++.++.... -+.+++..|..+. +
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~---lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~ 238 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS---MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEM 238 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---cCCeEEeccccccccccccceeecCHHHHHHHH
Confidence 3579999997 999999999999999999999998877665432 3445555554210 1
Q ss_pred HhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 126 ~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.+.+.+++ .|+||+++-+.....+. .+ +...++.++.. ..||-++.-
T Consensus 239 ~~~~e~~~~-~DIVI~TalipG~~aP~-Li------t~emv~~MKpG--svIVDlA~d 286 (511)
T TIGR00561 239 ELFAAQAKE-VDIIITTALIPGKPAPK-LI------TEEMVDSMKAG--SVIVDLAAE 286 (511)
T ss_pred HHHHHHhCC-CCEEEECcccCCCCCCe-ee------hHHHHhhCCCC--CEEEEeeeC
Confidence 113445566 99999998443322221 11 34445555443 357767653
No 475
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=96.35 E-value=0.013 Score=51.48 Aligned_cols=99 Identities=13% Similarity=0.107 Sum_probs=61.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcC-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~d~Vi~ 141 (301)
.+.+++|+|++|.+|..+++.+...|++|+++.++.++.+.. ... ++..+ .+..+ ..+.+.+...+ ++|.+|+
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~ 214 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL--GADIA-INYREEDFVEVVKAETGGKGVDVILD 214 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--CCcEE-EecCchhHHHHHHHHcCCCCeEEEEE
Confidence 478999999999999999999999999999988876655432 211 12111 12222 11333333332 4999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
++|.. .....++.+... +++|.++..
T Consensus 215 ~~~~~--------------~~~~~~~~l~~~--g~~v~~g~~ 240 (325)
T TIGR02824 215 IVGGS--------------YLNRNIKALALD--GRIVQIGFQ 240 (325)
T ss_pred CCchH--------------HHHHHHHhhccC--cEEEEEecC
Confidence 98621 122233444333 588888764
No 476
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.32 E-value=0.016 Score=51.29 Aligned_cols=99 Identities=17% Similarity=0.138 Sum_probs=64.3
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcC-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~d~Vi~ 141 (301)
.+.+|||.|++|.+|..+++.+.+.|.+|+++.++.++.+.+.. . ++..+. +..+ ..+.+.+...+ ++|+|+.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~--g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d 214 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L--GIGPVV-STEQPGWQDKVREAAGGAPISVALD 214 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c--CCCEEE-cCCCchHHHHHHHHhCCCCCcEEEE
Confidence 47899999999999999999999999999998887766554432 2 222211 2222 12344444443 5999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.|... ....++.++.. ++||.++..
T Consensus 215 ~~g~~~--------------~~~~~~~l~~~--g~~v~~g~~ 240 (324)
T cd08292 215 SVGGKL--------------AGELLSLLGEG--GTLVSFGSM 240 (324)
T ss_pred CCCChh--------------HHHHHHhhcCC--cEEEEEecC
Confidence 887320 23445555443 588887653
No 477
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=96.27 E-value=0.086 Score=45.12 Aligned_cols=92 Identities=16% Similarity=0.201 Sum_probs=65.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEccC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG 144 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~Ag 144 (301)
+++|||.|||+- |+.+++.|.++|+.|++..-..... . ....+.+..+-+.+ .+.+.+.+.+ +++.||...-
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~---~--~~~~~~v~~G~l~~-~~~l~~~l~~~~i~~VIDATH 74 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG---P--ADLPGPVRVGGFGG-AEGLAAYLREEGIDLVIDATH 74 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC---c--ccCCceEEECCCCC-HHHHHHHHHHCCCCEEEECCC
Confidence 468999999764 8999999999999888876554332 1 23577888888877 7889998875 6999998653
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCC
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVN 175 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~ 175 (301)
+. . ..-+.+..++|++.++.
T Consensus 75 Pf---------A--~~is~~a~~ac~~~~ip 94 (248)
T PRK08057 75 PY---------A--AQISANAAAACRALGIP 94 (248)
T ss_pred cc---------H--HHHHHHHHHHHHHhCCc
Confidence 21 1 12245566666655543
No 478
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.26 E-value=0.02 Score=45.46 Aligned_cols=59 Identities=29% Similarity=0.376 Sum_probs=41.9
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.+++||+|+|.|.+..+|+.++..|.++|+.|++..... ..+.+..++ .|+||-
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T-------------------------~~l~~~~~~-ADIVVs 85 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT-------------------------KNLQEITRR-ADIVVS 85 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS-------------------------SSHHHHHTT-SSEEEE
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC-------------------------Ccccceeee-ccEEee
Confidence 457899999999999999999999999999999854321 224555566 888888
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
.+|..
T Consensus 86 a~G~~ 90 (160)
T PF02882_consen 86 AVGKP 90 (160)
T ss_dssp -SSST
T ss_pred eeccc
Confidence 87754
No 479
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.26 E-value=0.011 Score=49.53 Aligned_cols=38 Identities=24% Similarity=0.224 Sum_probs=31.9
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD 101 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~ 101 (301)
++++++|+|.|- |.+|+++++.|.+.|..|+.+.....
T Consensus 20 ~l~g~~vaIqGf-GnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 20 SLEGLTVAVQGL-GNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 567999999996 99999999999999997777654433
No 480
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.26 E-value=0.019 Score=50.76 Aligned_cols=99 Identities=18% Similarity=0.170 Sum_probs=64.2
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCC--ChHhHHHHhcC-CCCEEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~d~Vi~ 141 (301)
.+.+++|+|++|.+|..+++.+...|.+|+++.++.++.+.+.. .. +..+ .|..+ ..+.+.+...+ ++|.|++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g--~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl~ 217 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LG--ADVA-VDYTRPDWPDQVREALGGGGVTVVLD 217 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--CCEE-EecCCccHHHHHHHHcCCCCceEEEE
Confidence 46799999999999999999999999999998888766554321 22 2211 12222 12344444443 5999999
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+.|.. .....++++... +++|.++..
T Consensus 218 ~~g~~--------------~~~~~~~~l~~~--g~~v~~g~~ 243 (324)
T cd08244 218 GVGGA--------------IGRAALALLAPG--GRFLTYGWA 243 (324)
T ss_pred CCChH--------------hHHHHHHHhccC--cEEEEEecC
Confidence 97621 124445555444 588888764
No 481
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.23 E-value=0.061 Score=48.43 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=28.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEeCC
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDL 100 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G-~~V~~~~r~~ 100 (301)
++|.|+|++|++|+++++.|.+++ .++..+.++.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 479999999999999999998876 5888775443
No 482
>PLN02494 adenosylhomocysteinase
Probab=96.23 E-value=0.018 Score=53.41 Aligned_cols=69 Identities=23% Similarity=0.280 Sum_probs=49.9
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEc
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA 142 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~ 142 (301)
.+.+++|+|.|. |.||+.+++.+...|.+|++..+++.+..+... .+..++ + +.+++.. .|+||.+
T Consensus 251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~---~G~~vv-----~----leEal~~-ADVVI~t 316 (477)
T PLN02494 251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALM---EGYQVL-----T----LEDVVSE-ADIFVTT 316 (477)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh---cCCeec-----c----HHHHHhh-CCEEEEC
Confidence 357999999997 999999999999999999998888765433221 222221 2 3345667 8999987
Q ss_pred cCC
Q 022216 143 TGF 145 (301)
Q Consensus 143 Ag~ 145 (301)
.|.
T Consensus 317 TGt 319 (477)
T PLN02494 317 TGN 319 (477)
T ss_pred CCC
Confidence 653
No 483
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.22 E-value=0.0096 Score=52.60 Aligned_cols=105 Identities=19% Similarity=0.134 Sum_probs=65.6
Q ss_pred EEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccc---cC----CCCeEEEEccCCCChHhHHHHhcCCCCEEE
Q 022216 69 IFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLS---KD----NPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140 (301)
Q Consensus 69 vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~---~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 140 (301)
|.|.|+ |.+|..++..|+..|. +|++++++++....... .. ..... +. .+. . .+.+++ .|+||
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~--~t~---d-~~~l~d-ADiVI 71 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VT--GTN---D-YEDIAG-SDVVV 71 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EE--EcC---C-HHHhCC-CCEEE
Confidence 468998 9999999999998876 99999988764321111 00 01111 11 111 1 235788 99999
Q ss_pred EccCCCCCCC--CCCceeeehHHHHHHHHHHHHcCCC-EEEEecc
Q 022216 141 CATGFQPGWD--LFAPWKVDNFGTVNLVEACRKRGVN-RFILISS 182 (301)
Q Consensus 141 ~~Ag~~~~~~--~~~~~~~N~~g~~~l~~a~~~~~~~-~iV~~SS 182 (301)
.++|.....+ ....+..|+.-...+++.+.+...+ .+|.+|.
T Consensus 72 it~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN 116 (300)
T cd01339 72 ITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN 116 (300)
T ss_pred EecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 9998654322 1223455777777788877776544 4455554
No 484
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=96.20 E-value=0.078 Score=45.43 Aligned_cols=73 Identities=27% Similarity=0.414 Sum_probs=52.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEcc
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT 143 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~A 143 (301)
|+|||.|||+- |+.+++.|.++|+ |.+..-..-. .+........+.++.+-+.+ .+.+.+.+++ +++.||...
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g-~~~~~~~~~~~~v~~G~lg~-~~~l~~~l~~~~i~~vIDAT 74 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYG-GELLKPELPGLEVRVGRLGD-EEGLAEFLRENGIDAVIDAT 74 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhh-HhhhccccCCceEEECCCCC-HHHHHHHHHhCCCcEEEECC
Confidence 78999999765 7999999999998 5544333222 22221133567888888877 7888888875 699999865
No 485
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.20 E-value=0.021 Score=44.30 Aligned_cols=59 Identities=24% Similarity=0.306 Sum_probs=47.1
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.+++||+|+|.|.+.-+|..++..|.++|++|++..++. .++.+.+++ .|+||-
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t-------------------------~~l~~~v~~-ADIVvs 77 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT-------------------------IQLQSKVHD-ADVVVV 77 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC-------------------------cCHHHHHhh-CCEEEE
Confidence 466899999999999999999999999999999865431 124556667 888888
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
..|..
T Consensus 78 Atg~~ 82 (140)
T cd05212 78 GSPKP 82 (140)
T ss_pred ecCCC
Confidence 87754
No 486
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.19 E-value=0.026 Score=50.19 Aligned_cols=75 Identities=19% Similarity=0.203 Sum_probs=49.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhcccc--------CCCCeE--EEEccCCCChHhHHHHhcCC
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--------DNPSLQ--IVKADVTEGSAKLSEAIGDD 135 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~--~~~~Dl~~~~~~~~~~~~~~ 135 (301)
-++|.|.|+ |-+|..++..|+..|++|++.+++++..+..... ...+.. .....++- ..++.+++.+
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~-~~~l~~av~~- 83 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF-VATIEACVAD- 83 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee-cCCHHHHhcC-
Confidence 368999997 9999999999999999999999987654432110 000000 00011111 2346678888
Q ss_pred CCEEEEcc
Q 022216 136 SEAVVCAT 143 (301)
Q Consensus 136 ~d~Vi~~A 143 (301)
+|.||-+.
T Consensus 84 aDlViEav 91 (321)
T PRK07066 84 ADFIQESA 91 (321)
T ss_pred CCEEEECC
Confidence 99999886
No 487
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=96.19 E-value=0.069 Score=49.36 Aligned_cols=102 Identities=13% Similarity=0.159 Sum_probs=60.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHCCC------eEEEEEeCCchhhhcc----------------------cc--CCCCeEEE
Q 022216 68 KIFVAGATGSSGKRIVEQLLAKGF------AVKAGVRDLDKAKTTL----------------------SK--DNPSLQIV 117 (301)
Q Consensus 68 ~vlVtGatG~iG~~~~~~l~~~G~------~V~~~~r~~~~~~~~~----------------------~~--~~~~~~~~ 117 (301)
+|||.|+ |+||.++++.|+..|. ++++++.+.-....+- .+ ...+++.+
T Consensus 1 kVlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~ 79 (435)
T cd01490 1 KVFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL 79 (435)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence 4899996 9999999999999998 7887776532211100 00 22344444
Q ss_pred EccCCCChHh-H-HHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccccc
Q 022216 118 KADVTEGSAK-L-SEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV 185 (301)
Q Consensus 118 ~~Dl~~~~~~-~-~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~ 185 (301)
...+....+. + .+.+.+ .|+||++.- |+..-..+-+.|...++ .+|..++.+.
T Consensus 80 ~~~v~~~~~~~~~~~f~~~-~DvVi~alD-------------n~~aR~~vn~~C~~~~i-Pli~~gt~G~ 134 (435)
T cd01490 80 QNRVGPETEHIFNDEFWEK-LDGVANALD-------------NVDARMYVDRRCVYYRK-PLLESGTLGT 134 (435)
T ss_pred ecccChhhhhhhhHHHhcC-CCEEEECCC-------------CHHHHHHHHHHHHHhCC-CEEEEecccc
Confidence 4444321111 1 233455 777776641 45555677788887764 4666655443
No 488
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.19 E-value=0.046 Score=49.25 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=61.1
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCC-hHhHHHHh----cC-CCC-
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAI----GD-DSE- 137 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~----~~-~~d- 137 (301)
.+.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.... . ++..+ .|..+. .+.+.+.+ .+ ++|
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~-~--Ga~~~-i~~~~~~~~~~~~~~~~~t~~~g~d~ 240 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG-F--GADLT-LNPKDKSAREVKKLIKAFAKARGLRS 240 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-h--CCceE-ecCccccHHHHHHHHHhhcccCCCCC
Confidence 4789999999 999999999999999999998888777654432 2 22211 222221 12233222 21 254
Q ss_pred ---EEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 138 ---AVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 138 ---~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
+||.|.|.. .+....++.++.. ++++.++..
T Consensus 241 ~~d~v~d~~g~~-------------~~~~~~~~~l~~~--G~iv~~G~~ 274 (349)
T TIGR03201 241 TGWKIFECSGSK-------------PGQESALSLLSHG--GTLVVVGYT 274 (349)
T ss_pred CcCEEEECCCCh-------------HHHHHHHHHHhcC--CeEEEECcC
Confidence 788877632 1223345666554 588888764
No 489
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.19 E-value=0.032 Score=45.58 Aligned_cols=80 Identities=18% Similarity=0.134 Sum_probs=53.4
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
.+++||+|+|.|-+.-+|+-++..|+++|++|+++..+......- . .....-.....|.+..+.+.+++ .|+||-
T Consensus 58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~---~-~~~~hs~t~~~~~~~~l~~~~~~-ADIVIs 132 (197)
T cd01079 58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTR---G-ESIRHEKHHVTDEEAMTLDCLSQ-SDVVIT 132 (197)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccccc---c-cccccccccccchhhHHHHHhhh-CCEEEE
Confidence 367899999999999999999999999999999875443221100 0 00000011111212347778888 999999
Q ss_pred ccCCC
Q 022216 142 ATGFQ 146 (301)
Q Consensus 142 ~Ag~~ 146 (301)
++|..
T Consensus 133 AvG~~ 137 (197)
T cd01079 133 GVPSP 137 (197)
T ss_pred ccCCC
Confidence 98854
No 490
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.19 E-value=0.045 Score=49.76 Aligned_cols=100 Identities=13% Similarity=0.041 Sum_probs=61.1
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCCchhhhccccCCCCeEEEEccCCCC----hHhHHHHhcCCCCEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG----SAKLSEAIGDDSEAV 139 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~d~V 139 (301)
.+.+|||+|+ |.||...++.+...|. +|+++++++++.+.... . ++.. ..|..+. .+.+.+...+.+|++
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~--Ga~~-~i~~~~~~~~~~~~v~~~~~~g~d~v 259 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-L--GATD-CVNPNDYDKPIQEVIVEITDGGVDYS 259 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-h--CCCe-EEcccccchhHHHHHHHHhCCCCCEE
Confidence 4789999986 9999999988888898 79888887776554432 2 2211 1233220 133434333249999
Q ss_pred EEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 140 VCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 140 i~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
|.++|.. ......++.++.. .++++.++..
T Consensus 260 id~~G~~-------------~~~~~~~~~~~~~-~G~~v~~g~~ 289 (368)
T TIGR02818 260 FECIGNV-------------NVMRAALECCHKG-WGESIIIGVA 289 (368)
T ss_pred EECCCCH-------------HHHHHHHHHhhcC-CCeEEEEecc
Confidence 9998731 1123344444432 2588888753
No 491
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=96.19 E-value=0.0071 Score=53.36 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=69.4
Q ss_pred EEcCCchHHHHHHHHHHHCCC--eEEEEEeCCchhhhcccc-------CCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 71 VAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 71 VtGatG~iG~~~~~~l~~~G~--~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
|.|+ |.+|..++-.|+..+. ++++++++.+.+.....+ ...++.+. . .+ .+.+++ .|+||.
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~-----~~~~~d-aDivVi 70 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GD-----YSDCKD-ADLVVI 70 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CC-----HHHHCC-CCEEEE
Confidence 4565 9999999999998874 788888876544332211 11122222 1 12 456788 999999
Q ss_pred ccCCCC--CCCCCCceeeehHHHHHHHHHHHHcCC-CEEEEeccc
Q 022216 142 ATGFQP--GWDLFAPWKVDNFGTVNLVEACRKRGV-NRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iV~~SS~ 183 (301)
+||... ..+....++.|..-...+.+.+++++. ..+|.+|..
T Consensus 71 tag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP 115 (299)
T TIGR01771 71 TAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNP 115 (299)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 999643 334556678899888999999988764 356666653
No 492
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.18 E-value=0.014 Score=53.16 Aligned_cols=35 Identities=20% Similarity=0.439 Sum_probs=32.1
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD 99 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~ 99 (301)
..++|.|.||.|.+|..+++.|.++|++|++.+|+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 35799999999999999999999999999998874
No 493
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.16 E-value=0.023 Score=52.81 Aligned_cols=69 Identities=26% Similarity=0.289 Sum_probs=50.5
Q ss_pred hcccCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 62 ~~~~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
..+.+|+|+|.|. |.||+.+++.|...|.+|++..+++....+... .++.. .+ +.+++.. .|+||.
T Consensus 250 ~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~---~G~~~-----~~----leell~~-ADIVI~ 315 (476)
T PTZ00075 250 VMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAM---EGYQV-----VT----LEDVVET-ADIFVT 315 (476)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh---cCcee-----cc----HHHHHhc-CCEEEE
Confidence 3468999999997 889999999999999999998887665432211 12221 12 4456777 999998
Q ss_pred ccC
Q 022216 142 ATG 144 (301)
Q Consensus 142 ~Ag 144 (301)
+.|
T Consensus 316 atG 318 (476)
T PTZ00075 316 ATG 318 (476)
T ss_pred CCC
Confidence 865
No 494
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=96.15 E-value=0.034 Score=50.97 Aligned_cols=111 Identities=15% Similarity=0.089 Sum_probs=60.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCC----CeEE----EEccCCCChHhHHHHhcCCCCE
Q 022216 67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNP----SLQI----VKADVTEGSAKLSEAIGDDSEA 138 (301)
Q Consensus 67 ~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~----~~~Dl~~~~~~~~~~~~~~~d~ 138 (301)
|+|.|.|. |++|..++..|+ .|++|++.++++++.+++.....+ .+.- ..+.++. ..+..++..+ +|+
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~-t~~~~~~~~~-ad~ 76 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNA-TLDKNEAYRD-ADY 76 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEE-ecchhhhhcC-CCE
Confidence 46888875 999999997666 599999999999887765532111 0000 0011111 1113344567 999
Q ss_pred EEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCC-CEEEEecccc
Q 022216 139 VVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGV-NRFILISSIL 184 (301)
Q Consensus 139 Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iV~~SS~~ 184 (301)
||-|.+...+.+. . ..|+......++.+.+... .-+|.-||..
T Consensus 77 vii~Vpt~~~~k~-~--~~dl~~v~~v~~~i~~~~~g~lVV~~STv~ 120 (388)
T PRK15057 77 VIIATPTDYDPKT-N--YFNTSSVESVIKDVVEINPYAVMVIKSTVP 120 (388)
T ss_pred EEEeCCCCCccCC-C--CcChHHHHHHHHHHHhcCCCCEEEEeeecC
Confidence 9998764322111 1 1233444444443332222 3455566653
No 495
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=96.15 E-value=0.088 Score=45.67 Aligned_cols=110 Identities=15% Similarity=0.078 Sum_probs=68.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
++++|+|.||+|-+|+-+-+-..-.|..|++..-+.++..-++.+.+-...+-.-+=.|..+.+.+.+...+|+-|-|.|
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG 232 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG 232 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence 57999999999999995554444459999998877776655443222111111111111124455554446999999987
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecccccccccC
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAM 190 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~~~~~~~~ 190 (301)
-. ....++..++.+ +||+..+-++.|....
T Consensus 233 G~--------------~lDavl~nM~~~--gri~~CG~ISqYN~~~ 262 (343)
T KOG1196|consen 233 GK--------------MLDAVLLNMNLH--GRIAVCGMISQYNLEN 262 (343)
T ss_pred cH--------------HHHHHHHhhhhc--cceEeeeeehhccccC
Confidence 42 123345555555 5899999888886443
No 496
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.13 E-value=0.023 Score=50.03 Aligned_cols=99 Identities=17% Similarity=0.130 Sum_probs=62.7
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEEccC
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG 144 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag 144 (301)
.+.+|+|.|++|.+|..+++.+...|++|+++.+++++.+.+.. .++..+..+-.+..+.+.+. +.++|.++++.|
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~~ 217 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE---LGADEVVIDDGAIAEQLRAA-PGGFDKVLELVG 217 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---cCCcEEEecCccHHHHHHHh-CCCceEEEECCC
Confidence 46899999999999999999999999999988887766544321 22222221211112334444 335999999886
Q ss_pred CCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 145 FQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 145 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
.. .....++.+... ++++.++..
T Consensus 218 ~~--------------~~~~~~~~l~~~--g~~v~~g~~ 240 (320)
T cd08243 218 TA--------------TLKDSLRHLRPG--GIVCMTGLL 240 (320)
T ss_pred hH--------------HHHHHHHHhccC--CEEEEEccC
Confidence 21 123344444443 578887754
No 497
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.12 E-value=0.028 Score=51.65 Aligned_cols=71 Identities=17% Similarity=0.233 Sum_probs=53.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCCEEEEc
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA 142 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi~~ 142 (301)
+.|+|+|+|+ |.+|..+++++.+.|++|++++.++........ . ..+..|..| .+.+.+..+. ++|.|+-.
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a---d--~~~~~~~~d-~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA---H--RSHVIDMLD-GDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh---h--heEECCCCC-HHHHHHHHHHhCCCEEEEe
Confidence 4679999997 789999999999999999998877654221111 1 246678888 7888887773 49998864
No 498
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=96.12 E-value=0.067 Score=48.09 Aligned_cols=100 Identities=16% Similarity=0.229 Sum_probs=61.0
Q ss_pred cCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcC-CCC-EEEE
Q 022216 65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSE-AVVC 141 (301)
Q Consensus 65 ~~~~vlVtGatG~iG~~~~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d-~Vi~ 141 (301)
.+.+|+|+|+ |.+|..+++.+...|.+ |+++++++++.+.... ... -.++..+-.+ .+.+.+...+ ++| ++|.
T Consensus 160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~Ga-~~~i~~~~~~-~~~~~~~~~~~~~d~~v~d 235 (347)
T PRK10309 160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKS-LGA-MQTFNSREMS-APQIQSVLRELRFDQLILE 235 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCC-ceEecCcccC-HHHHHHHhcCCCCCeEEEE
Confidence 4789999975 99999999988889997 6777777766554321 211 1122211112 2345555543 478 8889
Q ss_pred ccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEeccc
Q 022216 142 ATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSI 183 (301)
Q Consensus 142 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS~ 183 (301)
|+|.. ......+++++.. ++++.++..
T Consensus 236 ~~G~~-------------~~~~~~~~~l~~~--G~iv~~G~~ 262 (347)
T PRK10309 236 TAGVP-------------QTVELAIEIAGPR--AQLALVGTL 262 (347)
T ss_pred CCCCH-------------HHHHHHHHHhhcC--CEEEEEccC
Confidence 88742 1123445555554 578887654
No 499
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=96.12 E-value=0.025 Score=51.61 Aligned_cols=68 Identities=21% Similarity=0.279 Sum_probs=52.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEeCCchhhhccccCCCCeEEEEccCCCChHhHHHHhcCCCCEEEE
Q 022216 66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC 141 (301)
Q Consensus 66 ~~~vlVtGatG~iG~~~~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi~ 141 (301)
+++|+|.|+ |.+|+.++.++.+.|++|++++.++....... --..+.+|..| .+.+.+.... +|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-----ad~~~~~~~~D-~~~l~~~a~~-~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-----ADEVIVADYDD-VAALRELAEQ-CDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-----CceEEecCCCC-HHHHHHHHhc-CCEEEe
Confidence 478999998 89999999999999999999987655432211 11355678888 8889888888 998753
No 500
>PRK06153 hypothetical protein; Provisional
Probab=96.07 E-value=0.065 Score=48.52 Aligned_cols=101 Identities=13% Similarity=0.169 Sum_probs=64.3
Q ss_pred cccCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEeCC---chh---------hhc-------------cccCCCCeEE
Q 022216 63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKA---------KTT-------------LSKDNPSLQI 116 (301)
Q Consensus 63 ~~~~~~vlVtGatG~iG~~~~~~l~~~G~-~V~~~~r~~---~~~---------~~~-------------~~~~~~~~~~ 116 (301)
.+++.+|+|.|+ ||+|+.++..|++.|. ++++++.+. +.+ +++ ......++..
T Consensus 173 kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~ 251 (393)
T PRK06153 173 KLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVP 251 (393)
T ss_pred HHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEE
Confidence 457889999998 9999999999999996 677665441 000 110 0012234555
Q ss_pred EEccCCCChHhHHHHhcCCCCEEEEccCCCCCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEecc
Q 022216 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISS 182 (301)
Q Consensus 117 ~~~Dl~~~~~~~~~~~~~~~d~Vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iV~~SS 182 (301)
+...+ + ++.+. .+.+ +|+||.|.. |..+-..+.++|.+.++ -+|.++-
T Consensus 252 ~~~~I-~-~~n~~-~L~~-~DiV~dcvD-------------n~~aR~~ln~~a~~~gI-P~Id~G~ 299 (393)
T PRK06153 252 HPEYI-D-EDNVD-ELDG-FTFVFVCVD-------------KGSSRKLIVDYLEALGI-PFIDVGM 299 (393)
T ss_pred EeecC-C-HHHHH-HhcC-CCEEEEcCC-------------CHHHHHHHHHHHHHcCC-CEEEeee
Confidence 55555 3 34443 5677 999998874 34444556777888775 3555443
Done!