Your job contains 1 sequence.
>022221
MELGGGRKRGRHDGASNGNGGFKKSKQEMENFPTGIGSKSKPCTKFFSTSGCPFGEGCHF
LHYVPGGFKAVSQMLNLGGTPAHPPPPPRNSGAPPSFPDGSSPPAVKSRLCNKYNSAEGC
KFGDKCHFAHGEWELGRPTVPSYEDPRAMGGPMHGRMGGRLEPPPQSLGAAASFGASATA
KISIDAKLAGAIIGKNGVNSKQICRLTGAKLSIRDHEVDPNLRNIELEGTFDQIKQASAM
VRELIVNVGSGSGHSMKSNSSSQSNNFKTKLCENFAKGSCTFGDRCHFAHGSEELRKSVI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022221
(300 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2170169 - symbol:AT5G06770 species:3702 "Arabi... 364 1.6e-63 2
TAIR|locus:2099292 - symbol:AT3G12130 species:3702 "Arabi... 389 4.4e-36 1
UNIPROTKB|G3V2D5 - symbol:ZFP36L1 "Zinc finger protein 36... 90 3.7e-08 2
TAIR|locus:2028306 - symbol:AT1G32360 species:3702 "Arabi... 101 4.0e-08 2
UNIPROTKB|G3V2P5 - symbol:ZFP36L1 "Zinc finger protein 36... 90 9.0e-08 2
TAIR|locus:2090669 - symbol:AT3G19360 species:3702 "Arabi... 110 1.9e-07 2
UNIPROTKB|Q7ZXW9 - symbol:zfp36l2-A "Zinc finger protein ... 92 5.0e-07 2
UNIPROTKB|A7MB98 - symbol:ZFP36L1 "Uncharacterized protei... 90 5.5e-07 2
UNIPROTKB|E2R2W0 - symbol:ZFP36L1 "Uncharacterized protei... 90 5.5e-07 2
UNIPROTKB|Q07352 - symbol:ZFP36L1 "Zinc finger protein 36... 90 5.5e-07 2
UNIPROTKB|I3LB77 - symbol:ZFP36L1 "Uncharacterized protei... 90 5.5e-07 2
MGI|MGI:107946 - symbol:Zfp36l1 "zinc finger protein 36, ... 90 5.5e-07 2
RGD|62009 - symbol:Zfp36l1 "zinc finger protein 36, C3H t... 90 5.5e-07 2
UNIPROTKB|P17431 - symbol:Zfp36l1 "Zinc finger protein 36... 90 5.5e-07 2
ZFIN|ZDB-GENE-030131-2391 - symbol:zfp36l1b "zinc finger ... 91 9.2e-07 2
UNIPROTKB|Q805B4 - symbol:zfp36l2-B "Zinc finger protein ... 92 1.0e-06 2
WB|WBGene00004078 - symbol:pos-1 species:6239 "Caenorhabd... 99 1.1e-06 2
ZFIN|ZDB-GENE-030131-9860 - symbol:zfp36l1a "zinc finger ... 90 1.2e-06 2
UNIPROTKB|Q6S9E0 - symbol:ZFP36 "Tristetraprolin" species... 89 1.3e-06 2
UNIPROTKB|A4IIN5 - symbol:zfp36l2 "Zinc finger protein 36... 89 1.8e-06 2
FB|FBgn0011837 - symbol:Tis11 "Tis11 homolog" species:722... 91 2.2e-06 2
TAIR|locus:2199352 - symbol:AT1G68200 species:3702 "Arabi... 95 2.8e-06 2
UNIPROTKB|P26651 - symbol:ZFP36 "Tristetraprolin" species... 87 2.9e-06 2
MGI|MGI:107945 - symbol:Zfp36l2 "zinc finger protein 36, ... 87 3.2e-06 2
TAIR|locus:2062476 - symbol:AT2G35430 species:3702 "Arabi... 98 4.9e-06 2
UNIPROTKB|F1MV20 - symbol:F1MV20 "Uncharacterized protein... 87 5.2e-06 2
RGD|620722 - symbol:Zfp36 "zinc finger protein 36" specie... 86 5.6e-06 2
UNIPROTKB|P47973 - symbol:Zfp36 "Tristetraprolin" species... 86 5.6e-06 2
RGD|1308913 - symbol:Zfp36l2 "zinc finger protein 36, C3H... 87 6.6e-06 2
UNIPROTKB|J9NWC9 - symbol:ZFP36L2 "Uncharacterized protei... 87 7.0e-06 2
UNIPROTKB|F1S5I0 - symbol:ZFP36L2 "Uncharacterized protei... 87 7.0e-06 2
UNIPROTKB|P47974 - symbol:ZFP36L2 "Zinc finger protein 36... 87 7.1e-06 2
TAIR|locus:2033384 - symbol:AT1G66810 species:3702 "Arabi... 96 8.9e-06 2
UNIPROTKB|G3MWV8 - symbol:ZFP36 "Tristetraprolin" species... 87 9.1e-06 2
UNIPROTKB|P53781 - symbol:ZFP36 "Tristetraprolin" species... 87 9.1e-06 2
UNIPROTKB|Q0VCR3 - symbol:ZFP36 "Tristetraprolin" species... 87 9.2e-06 2
UNIPROTKB|D0VE66 - symbol:LOC100623625 "Tristetraprolin" ... 87 9.3e-06 2
MGI|MGI:99180 - symbol:Zfp36 "zinc finger protein 36" spe... 84 9.6e-06 2
WB|WBGene00003230 - symbol:mex-5 species:6239 "Caenorhabd... 86 1.6e-05 2
WB|WBGene00003228 - symbol:mex-1 species:6239 "Caenorhabd... 93 1.9e-05 2
ZFIN|ZDB-GENE-030131-6366 - symbol:zgc:162730 "zgc:162730... 90 2.3e-05 2
ZFIN|ZDB-GENE-030131-5873 - symbol:zfp36l2 "zinc finger p... 85 2.9e-05 2
UNIPROTKB|E2RKS9 - symbol:ZFP36 "Uncharacterized protein"... 81 5.7e-05 2
CGD|CAL0004295 - symbol:orf19.5334 species:5476 "Candida ... 75 7.5e-05 3
WB|WBGene00003864 - symbol:oma-1 species:6239 "Caenorhabd... 91 7.9e-05 2
UNIPROTKB|G5EC86 - symbol:oma-1 "Protein OMA-1" species:6... 91 7.9e-05 2
WB|WBGene00009537 - symbol:ccch-2 species:6239 "Caenorhab... 79 8.9e-05 2
UNIPROTKB|J9NTC7 - symbol:ZFP36 "Uncharacterized protein"... 81 0.00011 2
WB|WBGene00007961 - symbol:C35D6.4 species:6239 "Caenorha... 76 0.00012 2
ZFIN|ZDB-GENE-990806-20 - symbol:cth1 "cth1" species:7955... 84 0.00013 2
WB|WBGene00009539 - symbol:F38C2.7 species:6239 "Caenorha... 76 0.00015 2
WB|WBGene00003231 - symbol:mex-6 species:6239 "Caenorhabd... 88 0.00016 2
TAIR|locus:2087775 - symbol:HUA1 "ENHANCER OF AG-4 1" spe... 76 0.00016 3
WB|WBGene00013319 - symbol:ccch-5 species:6239 "Caenorhab... 76 0.00022 2
WB|WBGene00009532 - symbol:ccch-1 species:6239 "Caenorhab... 82 0.00029 2
SGD|S000002558 - symbol:CTH1 "Member of the CCCH zinc fin... 78 0.00042 2
SGD|S000004126 - symbol:TIS11 "mRNA-binding protein expre... 76 0.00047 2
TAIR|locus:2182988 - symbol:AT5G18550 species:3702 "Arabi... 83 0.00049 3
TAIR|locus:2043530 - symbol:AT2G25970 "AT2G25970" species... 115 0.00056 1
ZFIN|ZDB-GENE-050913-48 - symbol:zgc:114130 "zgc:114130" ... 77 0.00057 2
WB|WBGene00003388 - symbol:moe-3 species:6239 "Caenorhabd... 81 0.00085 2
UNIPROTKB|F1LVT2 - symbol:F1LVT2 "Uncharacterized protein... 79 0.00093 2
WB|WBGene00004027 - symbol:pie-1 species:6239 "Caenorhabd... 76 0.00096 2
UNIPROTKB|Q94131 - symbol:pie-1 "Pharynx and intestine in... 76 0.00096 2
>TAIR|locus:2170169 [details] [associations]
symbol:AT5G06770 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00642 Pfam:PF13014
PROSITE:PS50084 PROSITE:PS50103 SMART:SM00322 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 HSSP:P22893
HOGENOM:HOG000238868 ProtClustDB:CLSN2686893 EMBL:AP002032
EMBL:AK117974 EMBL:BT005260 EMBL:AY086759 IPI:IPI00547673
RefSeq:NP_196295.1 UniGene:At.43568 ProteinModelPortal:Q9FG30
SMR:Q9FG30 IntAct:Q9FG30 PaxDb:Q9FG30 PRIDE:Q9FG30
EnsemblPlants:AT5G06770.1 GeneID:830566 KEGG:ath:AT5G06770
TAIR:At5g06770 eggNOG:NOG124614 InParanoid:Q9FG30 OMA:HPGSNYK
PhylomeDB:Q9FG30 Genevestigator:Q9FG30 Uniprot:Q9FG30
Length = 240
Score = 364 (133.2 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 74/123 (60%), Positives = 89/123 (72%)
Query: 181 KISIDAKLAGAIIGKNGVNSKQICRLTGAKLSIRDHEVDPNLRNIELEGTFDQIKQASAM 240
KIS+DA LAGAIIGK G++SKQICR TGAKLSI+DHE DPNL+ IELEGTF+QI AS M
Sbjct: 117 KISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGM 176
Query: 241 VRELIV---NVXXXXXXXXXXXXXXXXXXFKTKLCENFAKGSCTFGDRCHFAHGSEELRK 297
VRELI +V +KTK+C+ ++KG+CT+GDRCHFAHG ELR+
Sbjct: 177 VRELIGRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRR 236
Query: 298 SVI 300
S I
Sbjct: 237 SGI 239
Score = 302 (111.4 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 54/73 (73%), Positives = 62/73 (84%)
Query: 7 RKRGRHDGAS--NGNGGFKKSKQEMENFPTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYV 64
RKRGR + A+ N NGGFK+SKQEME+ TG+GSKSKPCTKFFSTSGCPFG+ CHFLHYV
Sbjct: 4 RKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYV 63
Query: 65 PGGFKAVSQMLNL 77
PGG+ A +QM NL
Sbjct: 64 PGGYNAAAQMTNL 76
Score = 101 (40.6 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGR 137
K+++C++Y+ C +GD+CHFAHGE EL R
Sbjct: 207 KTKICDRYSKGN-CTYGDRCHFAHGESELRR 236
Score = 88 (36.0 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAH 130
KS+ C K+ S GC FGD CHF H
Sbjct: 38 KSKPCTKFFSTSGCPFGDNCHFLH 61
>TAIR|locus:2099292 [details] [associations]
symbol:AT3G12130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00642 PROSITE:PS50084
PROSITE:PS50103 SMART:SM00322 SMART:SM00356 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 EMBL:AC069473
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 EMBL:AP002063 HSSP:P47974
EMBL:BT025032 EMBL:AK227373 EMBL:AY085746 IPI:IPI00526274
RefSeq:NP_566412.1 UniGene:At.27694 ProteinModelPortal:Q9C7C3
SMR:Q9C7C3 PaxDb:Q9C7C3 PRIDE:Q9C7C3 EnsemblPlants:AT3G12130.1
GeneID:820388 KEGG:ath:AT3G12130 TAIR:At3g12130 eggNOG:NOG319230
HOGENOM:HOG000238868 InParanoid:Q9C7C3 OMA:LAIRDHE PhylomeDB:Q9C7C3
ProtClustDB:CLSN2686893 Genevestigator:Q9C7C3 Uniprot:Q9C7C3
Length = 248
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 91/210 (43%), Positives = 111/210 (52%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAH---GEWE-LGRPTVPSYEDPXXXXXXXXXXXXXXLE 162
KS+ C K+ S GC FG+ CHF H G + + + T P
Sbjct: 38 KSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNMQGSGNGGRFS 97
Query: 163 PPPQS-LXXXXXXXXXXXXKISIDAKLAGAIIGKNGVNSKQICRLTGAKLSIRDHEVDPN 221
+S + S+DA LAGAIIGK GV+SKQICR TG KLSI+DHE DPN
Sbjct: 98 GRGESGPGHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPN 157
Query: 222 LRNIELEGTFDQIKQASAMVRELIVNVXXXXXX-----------XXXXXXXXXXXXFKTK 270
L+NI LEGT +QI +ASAMV++LI + FKTK
Sbjct: 158 LKNIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTK 217
Query: 271 LCENFAKGSCTFGDRCHFAHGSEELRKSVI 300
+CE F+KG+CTFGDRCHFAHG ELRKS I
Sbjct: 218 ICERFSKGNCTFGDRCHFAHGEAELRKSGI 247
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 57/74 (77%), Positives = 65/74 (87%)
Query: 7 RKRGRHD-GASNGNGG-FKKSKQEMENFPTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYV 64
RKRGR + G+ N NGG +KKSKQEME++ TG+GSKSKPCTKFFSTSGCPFGE CHFLHYV
Sbjct: 4 RKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYV 63
Query: 65 PGGFKAVSQMLNLG 78
PGG+ AVSQM N+G
Sbjct: 64 PGGYNAVSQMTNMG 77
>UNIPROTKB|G3V2D5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006417 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0000288 HGNC:HGNC:1107
ChiTaRS:ZFP36L1 InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2D5 SMR:G3V2D5 Ensembl:ENST00000557022
ArrayExpress:G3V2D5 Bgee:G3V2D5 Uniprot:G3V2D5
Length = 176
Score = 90 (36.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 131 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 161
Score = 90 (36.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 94 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 132
Score = 53 (23.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 39 KSKPCTKFFSTSGCPFGEGCHFLH 62
K++ C F C +G+ C F H
Sbjct: 94 KTELCRPFEENGACKYGDKCQFAH 117
>TAIR|locus:2028306 [details] [associations]
symbol:AT1G32360 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC007767 EMBL:AC084110
EMBL:AK118013 EMBL:AY056407 EMBL:AY081710 IPI:IPI00524758
PIR:D86448 RefSeq:NP_564396.1 UniGene:At.15521 UniGene:At.74086
HSSP:P47974 ProteinModelPortal:Q9LQM3 SMR:Q9LQM3 PaxDb:Q9LQM3
PRIDE:Q9LQM3 EnsemblPlants:AT1G32360.1 GeneID:840128
KEGG:ath:AT1G32360 TAIR:At1g32360 eggNOG:NOG288218
HOGENOM:HOG000242590 InParanoid:Q9LQM3 OMA:PREEFQI PhylomeDB:Q9LQM3
ProtClustDB:CLSN2688195 Genevestigator:Q9LQM3 Uniprot:Q9LQM3
Length = 384
Score = 101 (40.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 103 PPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGR 137
P K+R+CNK+ C FG KCHFAHG EL R
Sbjct: 258 PSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292
Score = 90 (36.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 34 TGIGSKSKPCTKFFSTSGCPFGEGCHFLH 62
+G K + C KF++ GCP+GE C FLH
Sbjct: 169 SGRSFKGRHCKKFYTEEGCPYGESCTFLH 197
Score = 90 (36.7 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 267 FKTKLCENFA-KGSCTFGDRCHFAHGSEELRK 297
+KT++C + G C FG +CHFAHG+ EL +
Sbjct: 261 WKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292
Score = 86 (35.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 30/116 (25%), Positives = 44/116 (37%)
Query: 39 KSKPCTKFFSTSGCPFGEGCHFLHYV------PGGFK---AVSQMLNLGGTXXXXXXXXX 89
K+K C KF + + CP+ C+F H V P ++ A + GG
Sbjct: 93 KTKLCCKFRAGT-CPYITNCNFAHTVEELRRPPPNWQEIVAAHEEERSGGMGTPTVSVVE 151
Query: 90 XXXX-----XXXXXDGSSPPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV 140
S + K R C K+ + EGC +G+ C F H E R +V
Sbjct: 152 IPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESV 207
>UNIPROTKB|G3V2P5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 HGNC:HGNC:1107 ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2P5 SMR:G3V2P5 Ensembl:ENST00000557086
ArrayExpress:G3V2P5 Bgee:G3V2P5 Uniprot:G3V2P5
Length = 207
Score = 90 (36.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 159 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 189
Score = 90 (36.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 122 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 160
Score = 53 (23.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 39 KSKPCTKFFSTSGCPFGEGCHFLH 62
K++ C F C +G+ C F H
Sbjct: 122 KTELCRPFEENGACKYGDKCQFAH 145
>TAIR|locus:2090669 [details] [associations]
symbol:AT3G19360 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 EMBL:AB025624 HSSP:P47974
EMBL:AY037226 EMBL:AY081745 IPI:IPI00533341 RefSeq:NP_566631.1
UniGene:At.22994 ProteinModelPortal:Q9LT81 SMR:Q9LT81 IntAct:Q9LT81
PRIDE:Q9LT81 EnsemblPlants:AT3G19360.1 GeneID:821470
KEGG:ath:AT3G19360 TAIR:At3g19360 eggNOG:NOG138498
HOGENOM:HOG000090850 InParanoid:Q9LT81 OMA:RMCAKFR PhylomeDB:Q9LT81
ProtClustDB:CLSN2688560 Genevestigator:Q9LT81 Uniprot:Q9LT81
Length = 386
Score = 110 (43.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHGSEELRKSV 299
+KT+LC F G C FGD+CHFAHG EL SV
Sbjct: 270 WKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSV 303
Score = 105 (42.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+RLC K++ C FGDKCHFAHG+ EL
Sbjct: 271 KTRLCMKFDITGQCPFGDKCHFAHGQAEL 299
Score = 73 (30.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRP 138
K+R+C K+ + C+ G+ C+FAHG +L +P
Sbjct: 106 KTRMCAKFRAGT-CRNGELCNFAHGIEDLRQP 136
Score = 71 (30.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 106 VKSRLCNKYNSAEGCKFGDKCHFAH 130
++ +LC K+ E C +GD+C+F H
Sbjct: 184 LRMKLCRKFCFGEECPYGDRCNFIH 208
Score = 65 (27.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 39 KSKPCTKFFSTSGCPFGEGCHFLH 62
+ K C KF CP+G+ C+F+H
Sbjct: 185 RMKLCRKFCFGEECPYGDRCNFIH 208
>UNIPROTKB|Q7ZXW9 [details] [associations]
symbol:zfp36l2-A "Zinc finger protein 36, C3H1 type-like
2-A" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=ISS] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0048793 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:BC044086 EMBL:AF061982
RefSeq:NP_001080610.1 UniGene:Xl.23743 UniGene:Xl.476
ProteinModelPortal:Q7ZXW9 SMR:Q7ZXW9 GeneID:380302 KEGG:xla:380302
CTD:380302 Xenbase:XB-GENE-6256550 Uniprot:Q7ZXW9
Length = 363
Score = 92 (37.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELRKS 298
+KT+LC F G C +G RCHF H +EE R++
Sbjct: 170 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRQA 202
Score = 89 (36.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + + CK+G+KC FAHG EL T P Y+
Sbjct: 133 KTELCRPFEESGACKYGEKCQFAHGFHELRSLTRHPKYK 171
Score = 57 (25.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 39 KSKPCTKFFSTSGCPFGEGCHFLH 62
K++ C F + C +GE C F H
Sbjct: 133 KTELCRPFEESGACKYGEKCQFAH 156
>UNIPROTKB|A7MB98 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GeneTree:ENSGT00530000063262 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:DAAA02029486 EMBL:BC151440 IPI:IPI00709262
RefSeq:NP_001094704.1 UniGene:Bt.61758 SMR:A7MB98 STRING:A7MB98
Ensembl:ENSBTAT00000035742 GeneID:614773 KEGG:bta:614773
InParanoid:A7MB98 NextBio:20899277 Uniprot:A7MB98
Length = 338
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 183
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 154
>UNIPROTKB|E2R2W0 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:AAEX03005803
RefSeq:XP_853070.1 Ensembl:ENSCAFT00000026141 GeneID:490748
KEGG:cfa:490748 NextBio:20863709 Uniprot:E2R2W0
Length = 338
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 183
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 154
>UNIPROTKB|Q07352 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0043488 "regulation of
mRNA stability" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005829 GO:GO:0005634 GO:GO:0010467 GO:GO:0016071
GO:GO:0006417 PDB:1W0V PDB:1W0W PDBsum:1W0V PDBsum:1W0W
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0003700 GO:GO:0017091 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CleanEx:HS_BRF1
EMBL:X79066 EMBL:X79067 EMBL:X99404 EMBL:BT019468 EMBL:BC018340
IPI:IPI00016635 PIR:S34854 RefSeq:NP_001231627.1
RefSeq:NP_001231630.1 RefSeq:NP_004917.2 UniGene:Hs.85155
ProteinModelPortal:Q07352 SMR:Q07352 IntAct:Q07352
MINT:MINT-1375566 STRING:Q07352 PhosphoSite:Q07352 DMDM:1351254
PaxDb:Q07352 PeptideAtlas:Q07352 PRIDE:Q07352 DNASU:677
Ensembl:ENST00000336440 Ensembl:ENST00000439696 GeneID:677
KEGG:hsa:677 UCSC:uc001xkh.2 CTD:677 GeneCards:GC14M069254
HGNC:HGNC:1107 HPA:HPA001301 MIM:601064 neXtProt:NX_Q07352
PharmGKB:PA35027 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InParanoid:Q07352 OMA:HSYSFAG OrthoDB:EOG480HXD PhylomeDB:Q07352
ChiTaRS:ZFP36L1 EvolutionaryTrace:Q07352 GenomeRNAi:677
NextBio:2790 ArrayExpress:Q07352 Bgee:Q07352 CleanEx:HS_ZFP36L1
Genevestigator:Q07352 GermOnline:ENSG00000185650 InterPro:IPR007635
Pfam:PF04553 Uniprot:Q07352
Length = 338
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 183
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 154
>UNIPROTKB|I3LB77 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:CT956041
RefSeq:XP_003356787.1 Ensembl:ENSSSCT00000022695 GeneID:100624279
KEGG:ssc:100624279 Uniprot:I3LB77
Length = 338
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 183
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 154
>MGI|MGI:107946 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017091 "AU-rich
element binding" evidence=ISO] [GO:0033077 "T cell differentiation
in thymus" evidence=IGI] [GO:0043488 "regulation of mRNA stability"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:107946 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:M58566 IPI:IPI00138335
PIR:B39590 RefSeq:NP_031590.1 UniGene:Mm.235132
ProteinModelPortal:P23950 SMR:P23950 STRING:P23950
PhosphoSite:P23950 PRIDE:P23950 Ensembl:ENSMUST00000021552
Ensembl:ENSMUST00000165114 GeneID:12192 KEGG:mmu:12192
InParanoid:P23950 NextBio:280591 Bgee:P23950 CleanEx:MM_ZFP36L1
Genevestigator:P23950 GermOnline:ENSMUSG00000021127 Uniprot:P23950
Length = 338
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 183
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 154
>RGD|62009 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=IEA;ISO] [GO:0001570 "vasculogenesis" evidence=IEA;ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0006417 "regulation of
translation" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IMP]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA;ISO]
[GO:0043488 "regulation of mRNA stability" evidence=IEA;ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0006402 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553
EMBL:X52590 EMBL:X86571 IPI:IPI00188182 PIR:S10471
RefSeq:NP_058868.1 UniGene:Rn.6142 ProteinModelPortal:P17431
SMR:P17431 MINT:MINT-1210346 STRING:P17431 PhosphoSite:P17431
GeneID:29344 KEGG:rno:29344 UCSC:RGD:62009 InParanoid:P17431
NextBio:608836 ArrayExpress:P17431 Genevestigator:P17431
GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 183
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 154
>UNIPROTKB|P17431 [details] [associations]
symbol:Zfp36l1 "Zinc finger protein 36, C3H1 type-like 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0006402
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CTD:677
HOGENOM:HOG000233479 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 EMBL:X52590 EMBL:X86571
IPI:IPI00188182 PIR:S10471 RefSeq:NP_058868.1 UniGene:Rn.6142
ProteinModelPortal:P17431 SMR:P17431 MINT:MINT-1210346
STRING:P17431 PhosphoSite:P17431 GeneID:29344 KEGG:rno:29344
UCSC:RGD:62009 InParanoid:P17431 NextBio:608836 ArrayExpress:P17431
Genevestigator:P17431 GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 183
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+GDKC FAHG EL T P Y+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYK 154
>ZFIN|ZDB-GENE-030131-2391 [details] [associations]
symbol:zfp36l1b "zinc finger protein 36, C3H
type-like 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-2391 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 HOGENOM:HOG000233479
HOVERGEN:HBG008483 InterPro:IPR007635 Pfam:PF04553 EMBL:BX649319
EMBL:BC063991 IPI:IPI00481341 RefSeq:NP_955943.1 UniGene:Dr.78307
SMR:Q6P3H0 Ensembl:ENSDART00000014168 GeneID:323671 KEGG:dre:323671
CTD:323671 InParanoid:Q6P3H0 OMA:SSITCIS NextBio:20808378
Uniprot:Q6P3H0
Length = 348
Score = 91 (37.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 176 YKTELCRTFHSIGYCPYGPRCHFIHNAEERR 206
Score = 87 (35.7 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + CK+GDKC FAHG EL
Sbjct: 139 KTELCRPFEENGTCKYGDKCQFAHGMHEL 167
>UNIPROTKB|Q805B4 [details] [associations]
symbol:zfp36l2-B "Zinc finger protein 36, C3H1 type-like
2-B" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0039020 "pronephric nephron tubule
development" evidence=IMP] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=IMP] [GO:0072080 "nephron tubule development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0039020 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:AF061982 UniGene:Xl.476
EMBL:AB097482 EMBL:BC084221 RefSeq:NP_001081886.1
ProteinModelPortal:Q805B4 SMR:Q805B4 GeneID:398103 KEGG:xla:398103
CTD:398103 Xenbase:XB-GENE-971016 Uniprot:Q805B4
Length = 364
Score = 92 (37.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELRKS 298
+KT+LC F G C +G RCHF H +EE R++
Sbjct: 172 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRQA 204
Score = 86 (35.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + CK+G+KC FAHG EL T P Y+
Sbjct: 135 KTELCRPFEENGACKYGEKCQFAHGFHELRSLTRHPKYK 173
>WB|WBGene00004078 [details] [associations]
symbol:pos-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA;IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0008340 GO:GO:0009792 GO:GO:0008266 GO:GO:0008270
GO:GO:0003730 GO:GO:0009880 GO:GO:0001106 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:FO081326 EMBL:AB006208 PIR:T37246
RefSeq:NP_505172.1 UniGene:Cel.19584 ProteinModelPortal:G5EF15
SMR:G5EF15 IntAct:G5EF15 EnsemblMetazoa:F52E1.1 GeneID:179224
KEGG:cel:CELE_F52E1.1 CTD:179224 WormBase:F52E1.1 OMA:QFIHKLV
ChEMBL:CHEMBL1293304 NextBio:904448 Uniprot:G5EF15
Length = 264
Score = 99 (39.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 105 AVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTVP 141
A K+ LC+ Y ++ C +GD+C FAHG EL P P
Sbjct: 98 AFKTALCDAYKRSQACSYGDQCRFAHGVHELRLPMNP 134
Score = 73 (30.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAH 290
+KT LC+ F+ G+C +G RC F H
Sbjct: 142 YKTVLCDKFSMTGNCKYGTRCQFIH 166
>ZFIN|ZDB-GENE-030131-9860 [details] [associations]
symbol:zfp36l1a "zinc finger protein 36, C3H
type-like 1a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-9860 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 HOGENOM:HOG000233479 HOVERGEN:HBG008483
OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553 EMBL:BC124505
IPI:IPI00482112 RefSeq:NP_001070621.1 UniGene:Dr.105582
UniGene:Dr.107563 UniGene:Dr.31482 UniGene:Dr.76498
ProteinModelPortal:Q08BY3 SMR:Q08BY3 GeneID:561280 KEGG:dre:561280
CTD:561280 InParanoid:Q08BY3 NextBio:20883849 Uniprot:Q08BY3
Length = 374
Score = 90 (36.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H +EE R
Sbjct: 183 YKTELCRTFHTIGFCPYGPRCHFIHNAEERR 213
Score = 88 (36.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + CK+GDKC FAHG EL
Sbjct: 146 KTELCRPFEENGACKYGDKCQFAHGIHEL 174
>UNIPROTKB|Q6S9E0 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9940 "Ovis aries"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0010494
"cytoplasmic stress granule" evidence=ISS] [GO:0017091 "AU-rich
element binding" evidence=ISS] [GO:0032680 "regulation of tumor
necrosis factor production" evidence=ISS] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=ISS] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=ISS] [GO:0071889 "14-3-3 protein binding" evidence=ISS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 GO:GO:0006950 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0017091 GO:GO:0006402 GO:GO:0071889
GO:GO:0010494 GO:GO:0060213 GO:GO:0070935 GO:GO:0032680
HOVERGEN:HBG008483 CTD:7538 EMBL:AY462109 RefSeq:NP_001009765.1
UniGene:Oar.1075 ProteinModelPortal:Q6S9E0 SMR:Q6S9E0 GeneID:443283
Uniprot:Q6S9E0
Length = 325
Score = 89 (36.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC ++ + C++G KC FAHG EL +P+ P Y+
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQPSRHPKYK 141
Score = 87 (35.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHG-SEEL 295
+KT+LC F +G C +G RCHF H SE+L
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHNPSEDL 170
>UNIPROTKB|A4IIN5 [details] [associations]
symbol:zfp36l2 "Zinc finger protein 36, C3H1 type-like 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043488
"regulation of mRNA stability" evidence=ISS] [GO:0048793
"pronephros development" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GO:GO:0048793 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 CTD:678 EMBL:BC136091
RefSeq:NP_001096423.1 UniGene:Str.6563 STRING:A4IIN5
GeneID:100125029 KEGG:xtr:100125029 Xenbase:XB-GENE-971012
Uniprot:A4IIN5
Length = 333
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + + CK+G+KC FAHG EL T P Y+
Sbjct: 103 KTELCRPFEESGACKYGEKCQFAHGFHELRSLTRHPKYK 141
Score = 86 (35.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELRKS 298
+KT+LC F G C +G RCH H +EE R++
Sbjct: 140 YKTELCRTFHTIGFCPYGPRCHLIHNAEERRQA 172
>FB|FBgn0011837 [details] [associations]
symbol:Tis11 "Tis11 homolog" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0016246 GO:GO:0046872 GO:GO:0003677 EMBL:AE014298
GO:GO:0008270 GO:GO:0003730 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:U13397 EMBL:X81194
RefSeq:NP_511141.2 RefSeq:NP_727633.1 UniGene:Dm.4329
ProteinModelPortal:P47980 SMR:P47980 MINT:MINT-914241 STRING:P47980
PaxDb:P47980 EnsemblMetazoa:FBtr0073683 EnsemblMetazoa:FBtr0333756
GeneID:32222 KEGG:dme:Dmel_CG4070 CTD:32222 FlyBase:FBgn0011837
InParanoid:P47980 OMA:MNTSRYK OrthoDB:EOG47WM4T PhylomeDB:P47980
GenomeRNAi:32222 NextBio:777464 Bgee:P47980 Uniprot:P47980
Length = 436
Score = 91 (37.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + A CK+G+KC FAHG EL
Sbjct: 137 KTELCRPFEEAGECKYGEKCQFAHGSHEL 165
Score = 86 (35.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHGSEELR 296
+KT+ C F + G C +G RCHF H ++E R
Sbjct: 174 YKTEYCRTFHSVGFCPYGPRCHFVHNADEAR 204
>TAIR|locus:2199352 [details] [associations]
symbol:AT1G68200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC016447 HSSP:P22893
eggNOG:COG5063 HOGENOM:HOG000238120 EMBL:DQ446410 EMBL:DQ056514
EMBL:BT026077 IPI:IPI00524596 IPI:IPI00846853 PIR:D96705
RefSeq:NP_001077792.1 RefSeq:NP_176987.1 UniGene:At.52430
ProteinModelPortal:Q9C9F5 SMR:Q9C9F5 PaxDb:Q9C9F5 PRIDE:Q9C9F5
EnsemblPlants:AT1G68200.1 GeneID:843149 KEGG:ath:AT1G68200
GeneFarm:2969 TAIR:At1g68200 InParanoid:Q9C9F5 OMA:SVMENED
PhylomeDB:Q9C9F5 ProtClustDB:CLSN2682260 Genevestigator:Q9C9F5
Uniprot:Q9C9F5
Length = 308
Score = 95 (38.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV--PSYE 144
K+ LCNK+ C +GD C FAHG EL RP + P Y+
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKEL-RPVIRHPRYK 262
Score = 81 (33.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 20 GGFKKSKQE----MENFPTGIGSKSKPCTKFFSTSGCPFGEGCHFLH 62
GG KK QE +E + G+ +K++ C K+ T CP+G+ C F H
Sbjct: 202 GGGKKEDQEEEIEVEVYNQGM-TKTELCNKWQETGTCPYGDHCQFAH 247
Score = 76 (31.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 267 FKTKLCENFAKG-SCTFGDRCHFAHGSEELRKSV 299
+KT++C G +C +G RCHF H E K V
Sbjct: 261 YKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLV 294
>UNIPROTKB|P26651 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0050779 "RNA destabilization" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IMP;IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0019957 "C-C chemokine binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0006950 "response to stress" evidence=IDA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IDA] [GO:1900153
"positive regulation of nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0010467 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0003727 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483
CTD:7538 KO:K15308 EMBL:M92843 EMBL:M92844 EMBL:M63625
EMBL:AK314042 EMBL:AY771351 EMBL:BC009693 IPI:IPI00000893
PIR:S34427 RefSeq:NP_003398.2 UniGene:Hs.534052
ProteinModelPortal:P26651 SMR:P26651 DIP:DIP-29845N IntAct:P26651
MINT:MINT-1171915 STRING:P26651 PhosphoSite:P26651 DMDM:136471
PRIDE:P26651 DNASU:7538 Ensembl:ENST00000248673 GeneID:7538
KEGG:hsa:7538 UCSC:uc002olh.1 GeneCards:GC19P039897 HGNC:HGNC:12862
HPA:HPA006009 MIM:190700 neXtProt:NX_P26651 PharmGKB:PA37451
InParanoid:P26651 OMA:RRLPIFN OrthoDB:EOG4S4PH4 PhylomeDB:P26651
ChiTaRS:ZFP36 GenomeRNAi:7538 NextBio:29497 Bgee:P26651
CleanEx:HS_ZFP36 Genevestigator:P26651 GermOnline:ENSG00000128016
Uniprot:P26651
Length = 326
Score = 87 (35.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHG-SEEL 295
+KT+LC F +G C +G RCHF H SE+L
Sbjct: 142 YKTELCHKFYLQGRCPYGSRCHFIHNPSEDL 172
Score = 86 (35.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 101 SSPPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
++P K+ LC ++ + C++G KC FAHG EL + P Y+
Sbjct: 99 TTPSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYK 143
>MGI|MGI:107945 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IGI]
[GO:0043488 "regulation of mRNA stability" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:107945
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0033077 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 ChiTaRS:ZFP36L2 EMBL:M58564
EMBL:M97165 IPI:IPI00138319 PIR:C39590 UniGene:Mm.259321
ProteinModelPortal:P23949 SMR:P23949 STRING:P23949
PhosphoSite:P23949 PaxDb:P23949 PRIDE:P23949 InParanoid:P23949
CleanEx:MM_ZFP36L2 Genevestigator:P23949
GermOnline:ENSMUSG00000045817 Uniprot:P23949
Length = 367
Score = 87 (35.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H ++E R
Sbjct: 165 YKTELCRTFHTIGFCPYGPRCHFIHNADERR 195
Score = 87 (35.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + + CK+G+KC FAHG EL T P Y+
Sbjct: 128 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYK 166
>TAIR|locus:2062476 [details] [associations]
symbol:AT2G35430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC005314 HSSP:P47974
HOGENOM:HOG000242590 EMBL:BT020232 EMBL:BT020553 IPI:IPI00545818
PIR:E84768 RefSeq:NP_181086.2 UniGene:At.49567
ProteinModelPortal:Q5PP65 SMR:Q5PP65 PaxDb:Q5PP65 PRIDE:Q5PP65
EnsemblPlants:AT2G35430.1 GeneID:818109 KEGG:ath:AT2G35430
TAIR:At2g35430 eggNOG:NOG298782 InParanoid:Q5PP65 OMA:PDKISRV
PhylomeDB:Q5PP65 ProtClustDB:CLSN2915129 Genevestigator:Q5PP65
Uniprot:Q5PP65
Length = 252
Score = 98 (39.6 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 104 PAVKSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
P K+R+CNK+ + C FG CHFAHG EL
Sbjct: 142 PNWKTRICNKWQTTGYCPFGSHCHFAHGPSEL 173
Score = 88 (36.0 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHGSEEL 295
+KT++C + G C FG CHFAHG EL
Sbjct: 144 WKTRICNKWQTTGYCPFGSHCHFAHGPSEL 173
Score = 67 (28.6 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 15 ASNGNGGFKKSKQEMENFPTGIGS---KSKPCTKFFSTSGCPFG-EGCHFLH 62
A N +G SK+ + + IG K+K C KF + + CP+ CHF H
Sbjct: 46 AINSDGAESPSKKTRSSSSSEIGKSFFKTKLCFKFRAGT-CPYSASSCHFAH 96
Score = 66 (28.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 107 KSRLCNKYNSAEGCKFG-DKCHFAHGEWELGRPTVP 141
K++LC K+ + C + CHFAH EL P P
Sbjct: 73 KTKLCFKFRAGT-CPYSASSCHFAHSAEELRLPPPP 107
>UNIPROTKB|F1MV20 [details] [associations]
symbol:F1MV20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:DAAA02030674 IPI:IPI00695139
Ensembl:ENSBTAT00000004621 Uniprot:F1MV20
Length = 438
Score = 87 (35.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H ++E R
Sbjct: 188 YKTELCRTFHTIGFCPYGPRCHFIHNADERR 218
Score = 87 (35.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + + CK+G+KC FAHG EL T P Y+
Sbjct: 151 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYK 189
>RGD|620722 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO;ISS] [GO:0006950 "response to stress"
evidence=IEA;ISO;ISS] [GO:0007243 "intracellular protein kinase
cascade" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA;ISO;ISS] [GO:0017091 "AU-rich element binding"
evidence=ISO;ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0019957 "C-C chemokine binding"
evidence=IEA;ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA;ISO;ISS] [GO:0035925 "mRNA 3'-UTR AU-rich
region binding" evidence=IEA;ISO] [GO:0043488 "regulation of mRNA
stability" evidence=ISO] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA;ISO] [GO:0050779 "RNA destabilization"
evidence=IEA;ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO;ISS] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA;ISO;ISS] [GO:0071889 "14-3-3 protein
binding" evidence=IEA;ISO;ISS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 RGD:620722 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0006402
GO:GO:0071889 GO:GO:0010494 GO:GO:0060213 eggNOG:COG5063
GO:GO:0000289 GO:GO:0045638 GO:GO:0070935 GO:GO:0032680
GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:X63369 EMBL:AB025017
EMBL:BC060308 IPI:IPI00192126 PIR:JC1255 RefSeq:NP_579824.2
UniGene:Rn.82737 ProteinModelPortal:P47973 SMR:P47973 STRING:P47973
PhosphoSite:P47973 PRIDE:P47973 GeneID:79426 KEGG:rno:79426
UCSC:RGD:620722 InParanoid:P47973 NextBio:614778
Genevestigator:P47973 GermOnline:ENSRNOG00000019673 Uniprot:P47973
Length = 320
Score = 86 (35.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC Y+ + C++G KC FAHG EL + P Y+
Sbjct: 98 KTELCRTYSESGRCRYGAKCQFAHGPGELRQANRHPKYK 136
Score = 84 (34.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHGSEE 294
+KT+LC F +G C +G RCHF H E
Sbjct: 135 YKTELCHKFYLQGRCPYGSRCHFIHNPTE 163
>UNIPROTKB|P47973 [details] [associations]
symbol:Zfp36 "Tristetraprolin" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0019957 "C-C chemokine binding" evidence=IEA]
[GO:0035925 "mRNA 3'-UTR AU-rich region binding" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:620722 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0006950 GO:GO:0046872 GO:GO:0003677 GO:GO:0050728
GO:GO:0008270 GO:GO:0003729 GO:GO:0007243 GO:GO:0017091
GO:GO:0000122 GO:GO:0006402 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479
HOVERGEN:HBG008483 CTD:7538 KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4
EMBL:X63369 EMBL:AB025017 EMBL:BC060308 IPI:IPI00192126 PIR:JC1255
RefSeq:NP_579824.2 UniGene:Rn.82737 ProteinModelPortal:P47973
SMR:P47973 STRING:P47973 PhosphoSite:P47973 PRIDE:P47973
GeneID:79426 KEGG:rno:79426 UCSC:RGD:620722 InParanoid:P47973
NextBio:614778 Genevestigator:P47973 GermOnline:ENSRNOG00000019673
Uniprot:P47973
Length = 320
Score = 86 (35.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC Y+ + C++G KC FAHG EL + P Y+
Sbjct: 98 KTELCRTYSESGRCRYGAKCQFAHGPGELRQANRHPKYK 136
Score = 84 (34.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHGSEE 294
+KT+LC F +G C +G RCHF H E
Sbjct: 135 YKTELCHKFYLQGRCPYGSRCHFIHNPTE 163
>RGD|1308913 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=ISO]
[GO:0043488 "regulation of mRNA stability" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:1308913 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 CTD:678 OMA:PLAIQTH IPI:IPI00553840
RefSeq:NP_001031703.1 Ensembl:ENSRNOT00000006725 GeneID:298765
KEGG:rno:298765 UCSC:RGD:1308913 Uniprot:D3ZHK9
Length = 482
Score = 87 (35.7 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H ++E R
Sbjct: 190 YKTELCRTFHTIGFCPYGPRCHFIHNADERR 220
Score = 87 (35.7 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + + CK+G+KC FAHG EL T P Y+
Sbjct: 153 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYK 191
>UNIPROTKB|J9NWC9 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00530000063262
InterPro:IPR007635 Pfam:PF04553 OMA:PLAIQTH EMBL:AAEX03007468
RefSeq:XP_003639394.1 Ensembl:ENSCAFT00000048010 GeneID:100856710
KEGG:cfa:100856710 Uniprot:J9NWC9
Length = 491
Score = 87 (35.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H ++E R
Sbjct: 196 YKTELCRTFHTIGFCPYGPRCHFIHNADERR 226
Score = 87 (35.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + + CK+G+KC FAHG EL T P Y+
Sbjct: 159 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYK 197
>UNIPROTKB|F1S5I0 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:CU694628 RefSeq:XP_003125238.1
Ensembl:ENSSSCT00000009263 GeneID:100513591 KEGG:ssc:100513591
ArrayExpress:F1S5I0 Uniprot:F1S5I0
Length = 493
Score = 87 (35.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H ++E R
Sbjct: 192 YKTELCRTFHTIGFCPYGPRCHFIHNADERR 222
Score = 87 (35.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + + CK+G+KC FAHG EL T P Y+
Sbjct: 155 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYK 193
>UNIPROTKB|P47974 [details] [associations]
symbol:ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488 "regulation of
mRNA stability" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0005737
EMBL:CH471053 GO:GO:0046872 GO:GO:0003677 GO:GO:0008283
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 CleanEx:HS_BRF2 eggNOG:COG5063 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:U07802 EMBL:X78992 EMBL:AC010883 EMBL:BC005010
IPI:IPI00604786 PIR:S49147 RefSeq:NP_008818.3 UniGene:Hs.503093
UniGene:Hs.705738 PDB:1RGO PDBsum:1RGO ProteinModelPortal:P47974
SMR:P47974 IntAct:P47974 STRING:P47974 PhosphoSite:P47974
DMDM:146291085 PRIDE:P47974 DNASU:678 Ensembl:ENST00000282388
GeneID:678 KEGG:hsa:678 UCSC:uc002rsv.4 CTD:678
GeneCards:GC02M043449 HGNC:HGNC:1108 HPA:HPA047428 MIM:612053
neXtProt:NX_P47974 PharmGKB:PA35028 InParanoid:P47974 OMA:PLAIQTH
PhylomeDB:P47974 ChiTaRS:ZFP36L2 EvolutionaryTrace:P47974
GenomeRNAi:678 NextBio:2794 Bgee:P47974 CleanEx:HS_ZFP36L2
Genevestigator:P47974 GermOnline:ENSG00000152518 Uniprot:P47974
Length = 494
Score = 87 (35.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+LC F G C +G RCHF H ++E R
Sbjct: 192 YKTELCRTFHTIGFCPYGPRCHFIHNADERR 222
Score = 87 (35.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC + + CK+G+KC FAHG EL T P Y+
Sbjct: 155 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYK 193
>TAIR|locus:2033384 [details] [associations]
symbol:AT1G66810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AC013288 IPI:IPI00526106 RefSeq:NP_176853.1
UniGene:At.70746 HSSP:P22893 ProteinModelPortal:Q9C9N3 SMR:Q9C9N3
PaxDb:Q9C9N3 PRIDE:Q9C9N3 EnsemblPlants:AT1G66810.1 GeneID:842999
KEGG:ath:AT1G66810 TAIR:At1g66810 eggNOG:COG5063
HOGENOM:HOG000238120 InParanoid:Q9C9N3 OMA:ELNEHYE PhylomeDB:Q9C9N3
ProtClustDB:CLSN2681801 Genevestigator:Q9C9N3 Uniprot:Q9C9N3
Length = 310
Score = 96 (38.9 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 106 VKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV--PSYE 144
+K+ LCNK+ C +GD C FAHG EL RP + P Y+
Sbjct: 233 MKTELCNKWQETGACCYGDNCQFAHGIDEL-RPVIRHPRYK 272
Score = 70 (29.7 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 267 FKTKLCENFAKGS-CTFGDRCHFAH 290
+KT++C G+ C +G RCHF H
Sbjct: 271 YKTEVCRMMVTGAMCPYGHRCHFRH 295
>UNIPROTKB|G3MWV8 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:DAAA02047057 EMBL:DAAA02047055
EMBL:DAAA02047056 Ensembl:ENSBTAT00000011308 Uniprot:G3MWV8
Length = 324
Score = 87 (35.7 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHG-SEEL 295
+KT+LC F +G C +G RCHF H SE+L
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHNPSEDL 170
Score = 81 (33.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC ++ + C++G KC FAHG EL + + P Y+
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYK 141
>UNIPROTKB|P53781 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISS]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0071889
"14-3-3 protein binding" evidence=ISS] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0017091 "AU-rich element binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0017091
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
GO:GO:0070935 GO:GO:0032680 HOVERGEN:HBG008483 EMBL:L42319
IPI:IPI00698292 RefSeq:NP_776918.1 UniGene:Bt.3863
ProteinModelPortal:P53781 SMR:P53781 PRIDE:P53781 GeneID:282127
KEGG:bta:282127 CTD:7538 KO:K15308 NextBio:20805964 Uniprot:P53781
Length = 324
Score = 87 (35.7 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHG-SEEL 295
+KT+LC F +G C +G RCHF H SE+L
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHNPSEDL 170
Score = 81 (33.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC ++ + C++G KC FAHG EL + + P Y+
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYK 141
>UNIPROTKB|Q0VCR3 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IEA] [GO:0019957 "C-C
chemokine binding" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0007243 "intracellular protein kinase cascade"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0006950 GO:GO:0050728 GO:GO:0008270
GO:GO:0003729 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0010494 GO:GO:0060213 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GeneTree:ENSGT00530000063262 GO:GO:0032680
GO:GO:0050779 HOVERGEN:HBG008483 IPI:IPI00698292 UniGene:Bt.3863
OMA:RRLPIFN EMBL:DAAA02047057 EMBL:DAAA02047055 EMBL:DAAA02047056
EMBL:BC120043 SMR:Q0VCR3 Ensembl:ENSBTAT00000066266 Uniprot:Q0VCR3
Length = 325
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHG-SEEL 295
+KT+LC F +G C +G RCHF H SE+L
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHNPSEDL 170
Score = 81 (33.6 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC ++ + C++G KC FAHG EL + + P Y+
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYK 141
>UNIPROTKB|D0VE66 [details] [associations]
symbol:LOC100623625 "Tristetraprolin" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:FP102918 EMBL:FP236263
EMBL:GU066778 EMBL:HM484335 EMBL:HM480487 RefSeq:NP_001161891.1
RefSeq:XP_003355955.1 UniGene:Ssc.28024 STRING:D0VE66
Ensembl:ENSSSCT00000011714 Ensembl:ENSSSCT00000026750
GeneID:100316849 GeneID:100623625 KEGG:ssc:100316849
KEGG:ssc:100623625 Uniprot:D0VE66
Length = 326
Score = 87 (35.7 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHG-SEEL 295
+KT+LC F +G C +G RCHF H SE+L
Sbjct: 141 YKTELCHKFYLQGRCPYGSRCHFIHNPSEDL 171
Score = 81 (33.6 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC ++ + C++G KC FAHG EL + + P Y+
Sbjct: 104 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYK 142
>MGI|MGI:99180 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IMP] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IDA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006950 "response to stress" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=ISO] [GO:0017091 "AU-rich
element binding" evidence=ISO;IDA] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0019957 "C-C chemokine binding"
evidence=ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=ISO] [GO:0035925 "mRNA 3'-UTR AU-rich region
binding" evidence=IDA] [GO:0043488 "regulation of mRNA stability"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IMP] [GO:0050779 "RNA destabilization"
evidence=IMP] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISO]
[GO:0071889 "14-3-3 protein binding" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:99180 GO:GO:0005829 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0050728 GO:GO:0008270
GO:GO:0007243 GO:GO:0000122 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0035925 GO:GO:0050779
HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538 KO:K15308
OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:M57422 EMBL:M58691 EMBL:X14678
EMBL:M58565 EMBL:L42317 EMBL:BC021391 IPI:IPI00132695 PIR:A36600
PIR:S04743 RefSeq:NP_035886.1 UniGene:Mm.389856 PDB:1M9O
PDBsum:1M9O ProteinModelPortal:P22893 SMR:P22893 IntAct:P22893
MINT:MINT-225240 STRING:P22893 PhosphoSite:P22893 PRIDE:P22893
Ensembl:ENSMUST00000051241 GeneID:22695 KEGG:mmu:22695
InParanoid:P22893 EvolutionaryTrace:P22893 NextBio:303151
Bgee:P22893 CleanEx:MM_ZFP36 Genevestigator:P22893
GermOnline:ENSMUSG00000044786 Uniprot:P22893
Length = 319
Score = 84 (34.6 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHGSEE 294
+KT+LC F +G C +G RCHF H E
Sbjct: 134 YKTELCHKFYLQGRCPYGSRCHFIHNPTE 162
Score = 84 (34.6 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC Y+ + C++G KC FAHG EL + P Y+
Sbjct: 97 KTELCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYK 135
>WB|WBGene00003230 [details] [associations]
symbol:mex-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0008187
"poly-pyrimidine tract binding" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IGI;IMP] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0019901
"protein kinase binding" evidence=IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0009792
GO:GO:0040007 GO:GO:0005813 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0032880 GO:GO:0003730
eggNOG:COG5063 GO:GO:0043186 GO:GO:0008187
GeneTree:ENSGT00530000063262 EMBL:Z82286 PIR:T26081
RefSeq:NP_502566.1 ProteinModelPortal:Q9XUB2 SMR:Q9XUB2
IntAct:Q9XUB2 STRING:Q9XUB2 PaxDb:Q9XUB2 EnsemblMetazoa:W02A2.7.1
EnsemblMetazoa:W02A2.7.2 GeneID:178296 KEGG:cel:CELE_W02A2.7
UCSC:W02A2.7 CTD:178296 WormBase:W02A2.7 HOGENOM:HOG000113570
InParanoid:Q9XUB2 OMA:RYHRVME BindingDB:Q9XUB2 ChEMBL:CHEMBL1293319
NextBio:900550 Uniprot:Q9XUB2
Length = 468
Score = 86 (35.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 267 FKTKLCENFAKGS---CTFGDRCHFAHGSEE 294
+KTKLC+NFA+G C +G RC F H +++
Sbjct: 315 YKTKLCKNFARGGTGFCPYGLRCEFVHPTDK 345
Score = 84 (34.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 99 DGSSPPAVKSRLCNKYNSA-EGCKFGDKCHFAHGEWELGRPTVPS 142
D PP K+RLC + S + C G +C FAHG EL P+
Sbjct: 264 DSQQPPNYKTRLCMMHASGIKPCDMGARCKFAHGLKELRATDAPA 308
>WB|WBGene00003228 [details] [associations]
symbol:mex-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0030010 "establishment of cell polarity" evidence=IMP]
[GO:0001704 "formation of primary germ layer" evidence=IMP]
[GO:0009880 "embryonic pattern specification" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0003674 "molecular_function" evidence=NAS]
[GO:0003723 "RNA binding" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0009792 GO:GO:0002009 GO:GO:0008270 GO:GO:0000003
GO:GO:0003723 GO:GO:0009880 GO:GO:0030010 EMBL:AL023828 HSSP:P22893
GO:GO:0043186 GeneTree:ENSGT00530000063262 GO:GO:0001704 CTD:174836
EMBL:U81043 EMBL:Z66516 PIR:T26124 RefSeq:NP_001254325.1
UniGene:Cel.7263 ProteinModelPortal:G5ECB9 SMR:G5ECB9 IntAct:G5ECB9
EnsemblMetazoa:W03C9.7a.1 EnsemblMetazoa:W03C9.7a.2
EnsemblMetazoa:W03C9.7a.3 GeneID:174836 KEGG:cel:CELE_W03C9.7
WormBase:W03C9.7a OMA:HVERNQT NextBio:885712 Uniprot:G5ECB9
Length = 494
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 105 AVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTVP 141
A K+ LC+ + + C +G+ C FAHGE EL P+ P
Sbjct: 138 AFKTALCDAFKRSGSCPYGEACRFAHGENELRMPSQP 174
Score = 76 (31.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAH 290
+KT+LC+ F+ G C +G RC F H
Sbjct: 182 YKTQLCDKFSNFGQCPYGPRCQFIH 206
>ZFIN|ZDB-GENE-030131-6366 [details] [associations]
symbol:zgc:162730 "zgc:162730" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-6366 GO:GO:0008270 GO:GO:0003676
HOGENOM:HOG000233479 EMBL:BC139894 IPI:IPI00933596
UniGene:Dr.106159 STRING:A5D6V0 HOVERGEN:HBG105016
InParanoid:A5D6V0 OrthoDB:EOG4PK294 ArrayExpress:A5D6V0
Uniprot:A5D6V0
Length = 336
Score = 90 (36.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL-GRPTVPSYE 144
K+ LC + CK+G KC FAHGE EL G P Y+
Sbjct: 114 KTELCRSFQEHGSCKYGAKCQFAHGENELRGLYRHPKYK 152
Score = 74 (31.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAH 290
+KT+ C F + G C +G RCHF H
Sbjct: 151 YKTQACRTFYQFGYCPYGSRCHFIH 175
>ZFIN|ZDB-GENE-030131-5873 [details] [associations]
symbol:zfp36l2 "zinc finger protein 36, C3H
type-like 2" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-5873 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
EMBL:CR932077 IPI:IPI00508201 Ensembl:ENSDART00000142674
ArrayExpress:F1QU82 Bgee:F1QU82 Uniprot:F1QU82
Length = 373
Score = 85 (35.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + CK+G+KC FAHG EL
Sbjct: 119 KTELCRPFEENGSCKYGEKCQFAHGYHEL 147
Score = 80 (33.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELR 296
+KT+ C F G C +G RCHF H ++E R
Sbjct: 156 YKTEPCRTFHTIGFCPYGPRCHFIHNADERR 186
>UNIPROTKB|E2RKS9 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071889 "14-3-3 protein binding"
evidence=IEA] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0050779 "RNA destabilization" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035925 "mRNA 3'-UTR AU-rich region binding"
evidence=IEA] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA] [GO:0019957 "C-C chemokine binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006950 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0010494
GO:GO:0060213 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GeneTree:ENSGT00530000063262 GO:GO:0032680 GO:GO:0050779
OMA:RRLPIFN EMBL:AAEX03000957 Ensembl:ENSCAFT00000008910
Uniprot:E2RKS9
Length = 324
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC ++ + C++G KC FAHG EL + + P Y+
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYK 141
Score = 80 (33.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHGSEEL 295
+KTK+C F +G C +G RCHF E+L
Sbjct: 140 YKTKVCHKFYLQGGCPYGSRCHFIPFPEDL 169
>CGD|CAL0004295 [details] [associations]
symbol:orf19.5334 species:5476 "Candida albicans" [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006879 "cellular iron
ion homeostasis" evidence=IEA] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 CGD:CAL0004295
GO:GO:0008270 GO:GO:0003676 EMBL:AACQ01000059 EMBL:AACQ01000058
eggNOG:COG5063 RefSeq:XP_717058.1 RefSeq:XP_717137.1
ProteinModelPortal:Q5A5R5 GeneID:3641257 GeneID:3641293
KEGG:cal:CaO19.12794 KEGG:cal:CaO19.5334 Uniprot:Q5A5R5
Length = 203
Score = 75 (31.5 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHG 291
+++K C N+ K GSC +G+RC F HG
Sbjct: 177 WRSKPCANWTKYGSCRYGNRCCFKHG 202
Score = 73 (30.8 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + C + +KC FAHGE EL
Sbjct: 140 KTELCASFMKTGVCPYANKCQFAHGENEL 168
Score = 36 (17.7 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 16 SNGNGGFKKSKQEMENFPTGIGSKSKPCTKFFSTSGCP 53
S+ K S Q + N P + +P +F+ S P
Sbjct: 41 SSNESDIKHSSQSLFNSPHHYLFQQQPQQNWFNVSVSP 78
>WB|WBGene00003864 [details] [associations]
symbol:oma-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0048599 "oocyte development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0001556 "oocyte maturation" evidence=IGI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0006915 GO:GO:0008270
GO:GO:0003676 GO:GO:0001556 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:Z54236 EMBL:Z54235 PIR:T19155
RefSeq:NP_501542.1 ProteinModelPortal:G5EC86 SMR:G5EC86
IntAct:G5EC86 EnsemblMetazoa:C09G9.6.1 EnsemblMetazoa:C09G9.6.2
GeneID:177703 KEGG:cel:CELE_C09G9.6 CTD:177703 WormBase:C09G9.6
OMA:LLEDIAF NextBio:898006 Uniprot:G5EC86
Length = 407
Score = 91 (37.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 103 PPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPT 139
P + K+ +C + ++ C F D C FAHGE EL RPT
Sbjct: 110 PESYKTVICQAWLESKTCSFADNCRFAHGEEEL-RPT 145
Score = 70 (29.7 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAH 290
+KTKLC+ + G C +G RC F H
Sbjct: 155 YKTKLCDKYTTTGLCPYGKRCLFIH 179
>UNIPROTKB|G5EC86 [details] [associations]
symbol:oma-1 "Protein OMA-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0006915 GO:GO:0008270
GO:GO:0003676 GO:GO:0001556 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:Z54236 EMBL:Z54235 PIR:T19155
RefSeq:NP_501542.1 ProteinModelPortal:G5EC86 SMR:G5EC86
IntAct:G5EC86 EnsemblMetazoa:C09G9.6.1 EnsemblMetazoa:C09G9.6.2
GeneID:177703 KEGG:cel:CELE_C09G9.6 CTD:177703 WormBase:C09G9.6
OMA:LLEDIAF NextBio:898006 Uniprot:G5EC86
Length = 407
Score = 91 (37.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 103 PPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPT 139
P + K+ +C + ++ C F D C FAHGE EL RPT
Sbjct: 110 PESYKTVICQAWLESKTCSFADNCRFAHGEEEL-RPT 145
Score = 70 (29.7 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAH 290
+KTKLC+ + G C +G RC F H
Sbjct: 155 YKTKLCDKYTTTGLCPYGKRCLFIH 179
>WB|WBGene00009537 [details] [associations]
symbol:ccch-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0009792
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:Z82267 HOGENOM:HOG000114059
PIR:T21961 RefSeq:NP_502931.1 ProteinModelPortal:O45491 SMR:O45491
IntAct:O45491 STRING:O45491 EnsemblMetazoa:F38C2.5 GeneID:178454
KEGG:cel:CELE_F38C2.5 UCSC:F38C2.5 CTD:178454 WormBase:F38C2.5
InParanoid:O45491 NextBio:901202 Uniprot:O45491
Length = 186
Score = 79 (32.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEE 294
+KT LC+NF++ G C +G +C F H + E
Sbjct: 116 YKTVLCDNFSRTGHCKYGTKCQFIHRAVE 144
Score = 72 (30.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 105 AVKSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
A K+ LC + C +G++C FAH EL
Sbjct: 72 AFKTALCKTFQLTRACSYGEQCKFAHSVEEL 102
>UNIPROTKB|J9NTC7 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063262 EMBL:AAEX03000957
Ensembl:ENSCAFT00000042970 Uniprot:J9NTC7
Length = 294
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC ++ + C++G KC FAHG EL + + P Y+
Sbjct: 108 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYK 146
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHF 288
+KTK+C F +G C +G RCHF
Sbjct: 145 YKTKVCHKFYLQGGCPYGSRCHF 167
>WB|WBGene00007961 [details] [associations]
symbol:C35D6.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82261 PIR:T19760
RefSeq:NP_502949.1 UniGene:Cel.13375 ProteinModelPortal:O45289
SMR:O45289 STRING:O45289 EnsemblMetazoa:C35D6.4 GeneID:183235
KEGG:cel:CELE_C35D6.4 UCSC:C35D6.4 CTD:183235 WormBase:C35D6.4
HOGENOM:HOG000114669 InParanoid:O45289 NextBio:920410
Uniprot:O45289
Length = 203
Score = 76 (31.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEELRKS 298
+KT LC NF+ G C +G RC F H S + S
Sbjct: 130 YKTVLCNNFSTTGHCKYGIRCQFIHRSMDSTSS 162
Score = 76 (31.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 105 AVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRP 138
A K+ LC + + C +G+KC FAH EL P
Sbjct: 88 AFKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFP 121
>ZFIN|ZDB-GENE-990806-20 [details] [associations]
symbol:cth1 "cth1" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 ZFIN:ZDB-GENE-990806-20 GO:GO:0008270
GO:GO:0003676 HSSP:P22893 GeneTree:ENSGT00530000063262
EMBL:AL954709 EMBL:BC107984 EMBL:AJ249490 IPI:IPI00509714
RefSeq:NP_571014.1 UniGene:Dr.621 SMR:Q9PU62 STRING:Q9PU62
Ensembl:ENSDART00000101601 GeneID:30114 KEGG:dre:30114 CTD:30114
HOGENOM:HOG000153347 HOVERGEN:HBG078993 InParanoid:Q9PU62 KO:K13056
OMA:FTFSSQH NextBio:20806593 Uniprot:Q9PU62
Length = 319
Score = 84 (34.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTV-PSYE 144
K+ LC++Y CK+ ++C FAHG +L P+ P Y+
Sbjct: 61 KTELCSRYAETGTCKYAERCQFAHGLHDLHVPSRHPKYK 99
Score = 73 (30.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 267 FKTKLCENF-AKGSCTFGDRCHFAHGSEELR 296
+KT+LC + G C +G RC F H +E R
Sbjct: 98 YKTELCRTYHTAGYCVYGTRCLFVHNLKEQR 128
Score = 69 (29.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 272 CENF-AKGSCTFGDRCHFAH---GSE 293
C F A G C FG+RCHF H GSE
Sbjct: 139 CRTFRAFGVCPFGNRCHFLHVEGGSE 164
>WB|WBGene00009539 [details] [associations]
symbol:F38C2.7 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82267
HOGENOM:HOG000114669 PIR:T21963 RefSeq:NP_502930.1
UniGene:Cel.12984 ProteinModelPortal:O45493 SMR:O45493
IntAct:O45493 STRING:O45493 EnsemblMetazoa:F38C2.7 GeneID:185463
KEGG:cel:CELE_F38C2.7 UCSC:F38C2.7 CTD:185463 WormBase:F38C2.7
InParanoid:O45493 NextBio:928376 Uniprot:O45493
Length = 203
Score = 76 (31.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 105 AVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRP 138
A K+ LC + + C +G+KC FAH EL P
Sbjct: 88 AFKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFP 121
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGS 292
+KT LC NF+ G C +G RC F H S
Sbjct: 130 YKTVLCNNFSTTGHCKYGIRCQFIHRS 156
>WB|WBGene00003231 [details] [associations]
symbol:mex-6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA] [GO:0032880 "regulation of
protein localization" evidence=IGI] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0019901 "protein kinase
binding" evidence=IPI] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0009792 GO:GO:0002009
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0010171
GO:GO:0040011 GO:GO:0032880 GO:GO:0003730 eggNOG:COG5063
GO:GO:0043186 GeneTree:ENSGT00530000063262 EMBL:Z48009
HOGENOM:HOG000113570 PIR:T18624 RefSeq:NP_496043.1
ProteinModelPortal:Q09436 SMR:Q09436 DIP:DIP-26165N IntAct:Q09436
MINT:MINT-1040479 STRING:Q09436 PaxDb:Q09436 EnsemblMetazoa:AH6.5.1
EnsemblMetazoa:AH6.5.2 GeneID:174504 KEGG:cel:CELE_AH6.5 UCSC:AH6.5
CTD:174504 WormBase:AH6.5 InParanoid:Q09436 NextBio:884312
Uniprot:Q09436
Length = 467
Score = 88 (36.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 267 FKTKLCENFAKGS---CTFGDRCHFAHGSE 293
+KTKLC+NFA+G C +G RC F H S+
Sbjct: 318 YKTKLCKNFARGGSGVCPYGLRCEFVHPSD 347
Score = 72 (30.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 99 DGSSPPAVKSRLCNKYNSA-EGCKFGDKCHFAHGEWELGRPTVPS 142
D P K+RLC + + C G +C FAHG EL +P+
Sbjct: 267 DSQLPHNFKTRLCMTHAAGINPCALGARCKFAHGLKELRASDIPT 311
>TAIR|locus:2087775 [details] [associations]
symbol:HUA1 "ENHANCER OF AG-4 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001709 "cell fate
determination" evidence=TAS] [GO:0003723 "RNA binding"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0016607
GO:GO:0008270 GO:GO:0006397 GO:GO:0003723 GO:GO:0009908
EMBL:AB024033 GO:GO:0001709 EMBL:AY024357 EMBL:AC069474
EMBL:AK229145 IPI:IPI00536814 RefSeq:NP_187874.2 UniGene:At.5670
ProteinModelPortal:Q941Q3 SMR:Q941Q3 STRING:Q941Q3 PaxDb:Q941Q3
PRIDE:Q941Q3 EnsemblPlants:AT3G12680.1 GeneID:820448
KEGG:ath:AT3G12680 TAIR:At3g12680 eggNOG:NOG250655
HOGENOM:HOG000078745 InParanoid:Q941Q3 OMA:LGAHNTI PhylomeDB:Q941Q3
ProtClustDB:CLSN2690537 Genevestigator:Q941Q3 Uniprot:Q941Q3
Length = 524
Score = 76 (31.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 24 KSKQEMENFPTGIGSKSKPCTKFFSTSGCPFGEGCHFLH--YVPGG 67
+S + +P G K CT + T C FGE C F H +VP G
Sbjct: 163 ESTSHLPIYPQRAGEKD--CTHYMQTRTCKFGESCRFDHPIWVPEG 206
Score = 65 (27.9 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 272 CENFAK-GSCTFGDRCHFAHGSEEL 295
C+ + K G C FG+RC F H ++ L
Sbjct: 426 CDYYMKTGECKFGERCKFHHPADRL 450
Score = 57 (25.1 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 111 CNKYNSAEGCKFGDKCHFAH 130
C Y + CK+G KC F H
Sbjct: 231 CPYYIKTQRCKYGSKCKFNH 250
Score = 54 (24.1 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 101 SSPPAVKSRLCNKYNSAEGCKFGDKCHFAH 130
S P +C Y CKFG C F H
Sbjct: 264 SLPERPSEPMCTFYMKTGKCKFGLSCKFHH 293
>WB|WBGene00013319 [details] [associations]
symbol:ccch-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0009792 EMBL:Z99281 GO:GO:0008270 GO:GO:0000003
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262
PIR:T27239 RefSeq:NP_502805.1 ProteinModelPortal:O18251 SMR:O18251
STRING:O18251 EnsemblMetazoa:Y57G11C.25 GeneID:178412
KEGG:cel:CELE_Y57G11C.25 UCSC:Y57G11C.25 CTD:178412
WormBase:Y57G11C.25 HOGENOM:HOG000114059 InParanoid:O18251
NextBio:901036 Uniprot:O18251
Length = 199
Score = 76 (31.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEE 294
+KT LC+NF+ G C +G +C F H + E
Sbjct: 112 YKTVLCDNFSTTGHCKYGTKCQFIHRTVE 140
Score = 73 (30.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 105 AVKSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
A K+ LC + + C +G++C FAH EL
Sbjct: 68 AFKTALCKTFQLTKACSYGEQCKFAHSVEEL 98
>WB|WBGene00009532 [details] [associations]
symbol:ccch-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016529 "sarcoplasmic reticulum"
evidence=IDA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 GO:GO:0016529 HSSP:P22893
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z74033 PIR:T21954
RefSeq:NP_505926.2 ProteinModelPortal:Q20155 SMR:Q20155
PaxDb:Q20155 EnsemblMetazoa:F38B7.1a GeneID:179584
KEGG:cel:CELE_F38B7.1 UCSC:F38B7.1a CTD:179584 WormBase:F38B7.1a
HOGENOM:HOG000022515 InParanoid:Q20155 OMA:PCSSNDS NextBio:906034
ArrayExpress:Q20155 Uniprot:Q20155
Length = 460
Score = 82 (33.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 102 SPPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTVPSY 143
+P K+ LC + C +G++C +AHGE E RP VP +
Sbjct: 195 NPKLYKTELCRSWMDHGRCNYGERCQYAHGELEK-RP-VPRH 234
Score = 76 (31.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAH 290
+KT+ C++F + G C +G RCHF H
Sbjct: 237 YKTEACQSFHQSGYCPYGPRCHFIH 261
>SGD|S000002558 [details] [associations]
symbol:CTH1 "Member of the CCCH zinc finger family"
species:4932 "Saccharomyces cerevisiae" [GO:0006879 "cellular iron
ion homeostasis" evidence=IGI] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 SGD:S000002558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
EMBL:BK006938 GO:GO:0006879 GO:GO:0000956 eggNOG:COG5063
EMBL:L42133 EMBL:Z50046 EMBL:AY557690 PIR:S57977 RefSeq:NP_010435.1
ProteinModelPortal:P47976 SMR:P47976 DIP:DIP-1784N IntAct:P47976
MINT:MINT-385004 STRING:P47976 EnsemblFungi:YDR151C GeneID:851729
KEGG:sce:YDR151C CYGD:YDR151c GeneTree:ENSGT00530000063262
HOGENOM:HOG000001038 OMA:EIEEYYI OrthoDB:EOG4W3WXK NextBio:969448
Genevestigator:P47976 GermOnline:YDR151C Uniprot:P47976
Length = 325
Score = 78 (32.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + CK+G+KC FAHG EL
Sbjct: 206 KTELCESFTIKGYCKYGNKCQFAHGLNEL 234
Score = 75 (31.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEE 294
++TK C N++K G C +G RC F HG ++
Sbjct: 243 YRTKPCINWSKLGYCPYGKRCCFKHGDDK 271
>SGD|S000004126 [details] [associations]
symbol:TIS11 "mRNA-binding protein expressed during iron
starvation" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0006879 "cellular iron
ion homeostasis" evidence=IMP] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 SGD:S000004126 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
EMBL:BK006945 GO:GO:0006879 EMBL:X91258 EMBL:U53881 GO:GO:0000932
GO:GO:0000956 eggNOG:COG5063 GeneTree:ENSGT00530000063262
HOGENOM:HOG000001038 OrthoDB:EOG4W3WXK EMBL:S76619 EMBL:L42134
EMBL:Z73308 EMBL:AY558210 PIR:S59328 RefSeq:NP_013237.1
ProteinModelPortal:P47977 SMR:P47977 DIP:DIP-5614N IntAct:P47977
MINT:MINT-504800 STRING:P47977 EnsemblFungi:YLR136C GeneID:850827
KEGG:sce:YLR136C CYGD:YLR136c NextBio:967088 Genevestigator:P47977
GermOnline:YLR136C Uniprot:P47977
Length = 285
Score = 76 (31.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + C +G KC FAHG EL
Sbjct: 171 KTELCESFTLKGSCPYGSKCQFAHGLGEL 199
Score = 75 (31.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSE 293
F+TK C N+ K G C +G RC F HG +
Sbjct: 208 FRTKPCVNWEKLGYCPYGRRCCFKHGDD 235
>TAIR|locus:2182988 [details] [associations]
symbol:AT5G18550 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 eggNOG:NOG312935
HOGENOM:HOG000237733 ProtClustDB:CLSN2681554 EMBL:AC069328
EMBL:BT010886 EMBL:AK230175 IPI:IPI00533261 RefSeq:NP_197356.2
UniGene:At.22535 ProteinModelPortal:Q6NPN3 SMR:Q6NPN3 STRING:Q6NPN3
PaxDb:Q6NPN3 PRIDE:Q6NPN3 EnsemblPlants:AT5G18550.1 GeneID:831973
KEGG:ath:AT5G18550 TAIR:At5g18550 InParanoid:Q6NPN3 OMA:GSQPCAY
PhylomeDB:Q6NPN3 Genevestigator:Q6NPN3 GermOnline:AT5G18550
Uniprot:Q6NPN3
Length = 465
Score = 83 (34.3 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 21/58 (36%), Positives = 26/58 (44%)
Query: 18 GNGGFKKSKQEME--NFPTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPGGFKAVSQ 73
G GG + + FP G K C+ F T C FG C + H VP G +A SQ
Sbjct: 126 GGGGDSVTPVSLNYMGFPLRPGEKE--CSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQ 181
Score = 57 (25.1 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 272 CENFAK-GSCTFGDRCHFAH--GSEELRKS 298
C +FA+ G C FG C F H GS L S
Sbjct: 351 CTHFAQHGICKFGPACKFDHSLGSSSLSYS 380
Score = 50 (22.7 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 111 CNKYNSAEGCKFGDKCHFAH 130
C + CKFG C F H
Sbjct: 306 CQYFMRTGDCKFGTSCRFHH 325
>TAIR|locus:2043530 [details] [associations]
symbol:AT2G25970 "AT2G25970" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003723 EMBL:AC004747 EMBL:AC005395
eggNOG:NOG300923 KO:K13210 HSSP:Q9UNW9 EMBL:AY078954 EMBL:AK226845
IPI:IPI00540360 PIR:T02627 RefSeq:NP_180167.1 UniGene:At.21555
ProteinModelPortal:O82762 SMR:O82762 STRING:O82762 PaxDb:O82762
PRIDE:O82762 ProMEX:O82762 EnsemblPlants:AT2G25970.1 GeneID:817137
KEGG:ath:AT2G25970 TAIR:At2g25970 HOGENOM:HOG000242545
InParanoid:O82762 OMA:AANSTQD PhylomeDB:O82762
ProtClustDB:CLSN2913011 ArrayExpress:O82762 Genevestigator:O82762
Uniprot:O82762
Length = 632
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 165 PQSLXXXXXXXXXXXXKISIDAKLAGAIIGKNGVNSKQICRLTGAKLSI-RDHEVDPNL- 222
P S+ KI I G IIGK G K + +GAK+ + RD + DPN
Sbjct: 121 PSSIPVSYGSFQGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCA 180
Query: 223 -RNIELEGTFDQIKQASAMVRELI 245
R ++L GT DQI +A ++ +++
Sbjct: 181 TRTVDLTGTPDQISKAEQLITDVL 204
>ZFIN|ZDB-GENE-050913-48 [details] [associations]
symbol:zgc:114130 "zgc:114130" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-050913-48 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:BX927244 IPI:IPI00610779
Ensembl:ENSDART00000124803 Ensembl:ENSDART00000139068
Uniprot:F1QH59
Length = 394
Score = 77 (32.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + CK+G KC FAHG EL
Sbjct: 142 KTELCRTFAERGLCKYGGKCQFAHGPEEL 170
Score = 77 (32.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEE 294
+KT+ C F G C +G RCHF H +E+
Sbjct: 179 YKTEPCRTFHSIGFCPYGIRCHFVHNAED 207
>WB|WBGene00003388 [details] [associations]
symbol:moe-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048599 "oocyte development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 GO:GO:0048599 HSSP:P22893
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z81521
HOGENOM:HOG000016873 PIR:T21620 RefSeq:NP_496795.1
UniGene:Cel.15255 ProteinModelPortal:Q9XV46 SMR:Q9XV46
DIP:DIP-25142N IntAct:Q9XV46 MINT:MINT-1108588 STRING:Q9XV46
EnsemblMetazoa:F32A11.6 GeneID:174960 KEGG:cel:CELE_F32A11.6
UCSC:F32A11.6 CTD:174960 WormBase:F32A11.6 InParanoid:Q9XV46
OMA:HLAEDMA NextBio:886196 Uniprot:Q9XV46
Length = 367
Score = 81 (33.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 103 PPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRP 138
P + K+ +C + ++ C F + C FAHGE EL RP
Sbjct: 128 PESYKTVICQAWLESKTCTFAENCRFAHGEEEL-RP 162
Score = 70 (29.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAH 290
+KTKLC+ + G C +G RC F H
Sbjct: 173 YKTKLCDKYTTTGLCPYGKRCLFIH 197
>UNIPROTKB|F1LVT2 [details] [associations]
symbol:F1LVT2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000289 "nuclear-transcribed mRNA poly(A)
tail shortening" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005737 GO:GO:0008270 GO:GO:0017091 GO:GO:0000289
GeneTree:ENSGT00530000063262 IPI:IPI00362311
Ensembl:ENSRNOT00000050601 Uniprot:F1LVT2
Length = 490
Score = 79 (32.9 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWEL 135
K+ LC + C++G+KC FAHG EL
Sbjct: 143 KTELCRPFEENGTCRYGNKCQFAHGYHEL 171
Score = 75 (31.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 267 FKTKLCENFAK-GSCTFGDRCHFAHGSEE 294
+KT+ C F G C +G RCHF H E
Sbjct: 180 YKTEPCRTFHSIGYCPYGSRCHFIHNQPE 208
>WB|WBGene00004027 [details] [associations]
symbol:pie-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0001704 "formation of primary germ
layer" evidence=IMP] [GO:0009880 "embryonic pattern specification"
evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005829 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005813 GO:GO:0005819 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0009880 EMBL:Z98866 GO:GO:0001709 GO:GO:0043186 GO:GO:0001704
EMBL:U62896 PIR:S71796 PIR:T27052 RefSeq:NP_001255166.1
RefSeq:NP_001255167.1 UniGene:Cel.19704 ProteinModelPortal:Q94131
SMR:Q94131 DIP:DIP-25777N IntAct:Q94131 MINT:MINT-1058685
STRING:Q94131 PaxDb:Q94131 PRIDE:Q94131 EnsemblMetazoa:Y49E10.14a.1
EnsemblMetazoa:Y49E10.14a.2 GeneID:176667 KEGG:cel:CELE_Y49E10.14
UCSC:Y49E10.14.1 CTD:176667 WormBase:Y49E10.14a WormBase:Y49E10.14b
eggNOG:NOG246890 HOGENOM:HOG000019522 InParanoid:Q94131 OMA:CPARIQN
NextBio:893532 Uniprot:Q94131
Length = 335
Score = 76 (31.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 268 KTKLCENFAKGSCTFGDRCHFAH 290
+ ++C NF +G+C +G RC F H
Sbjct: 186 RRQICHNFERGNCRYGPRCRFIH 208
Score = 74 (31.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRP 138
K+RLC+ + C + D C +AHG+ EL P
Sbjct: 100 KTRLCDAFRREGYCPYNDNCTYAHGQDELRVP 131
>UNIPROTKB|Q94131 [details] [associations]
symbol:pie-1 "Pharynx and intestine in excess protein 1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005829 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005813 GO:GO:0005819 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0009880 EMBL:Z98866 GO:GO:0001709 GO:GO:0043186 GO:GO:0001704
EMBL:U62896 PIR:S71796 PIR:T27052 RefSeq:NP_001255166.1
RefSeq:NP_001255167.1 UniGene:Cel.19704 ProteinModelPortal:Q94131
SMR:Q94131 DIP:DIP-25777N IntAct:Q94131 MINT:MINT-1058685
STRING:Q94131 PaxDb:Q94131 PRIDE:Q94131 EnsemblMetazoa:Y49E10.14a.1
EnsemblMetazoa:Y49E10.14a.2 GeneID:176667 KEGG:cel:CELE_Y49E10.14
UCSC:Y49E10.14.1 CTD:176667 WormBase:Y49E10.14a WormBase:Y49E10.14b
eggNOG:NOG246890 HOGENOM:HOG000019522 InParanoid:Q94131 OMA:CPARIQN
NextBio:893532 Uniprot:Q94131
Length = 335
Score = 76 (31.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 268 KTKLCENFAKGSCTFGDRCHFAH 290
+ ++C NF +G+C +G RC F H
Sbjct: 186 RRQICHNFERGNCRYGPRCRFIH 208
Score = 74 (31.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 107 KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRP 138
K+RLC+ + C + D C +AHG+ EL P
Sbjct: 100 KTRLCDAFRREGYCPYNDNCTYAHGQDELRVP 131
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.137 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 300 238 0.00091 113 3 11 22 0.46 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 596 (63 KB)
Total size of DFA: 189 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.30u 0.11s 17.41t Elapsed: 00:00:00
Total cpu time: 17.30u 0.11s 17.41t Elapsed: 00:00:00
Start: Sat May 11 11:04:03 2013 End: Sat May 11 11:04:03 2013