Query 022227
Match_columns 300
No_of_seqs 258 out of 2257
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:59:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022227.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022227hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1496 Malate dehydrogenase [ 100.0 6.4E-69 1.4E-73 458.2 20.1 289 3-291 2-301 (332)
2 TIGR01757 Malate-DH_plant mala 100.0 2.2E-66 4.8E-71 484.4 30.8 282 3-289 42-337 (387)
3 PRK05442 malate dehydrogenase; 100.0 2.5E-66 5.5E-71 477.5 29.9 284 3-290 2-296 (326)
4 TIGR01759 MalateDH-SF1 malate 100.0 6E-66 1.3E-70 474.5 30.1 284 3-290 1-297 (323)
5 PLN00112 malate dehydrogenase 100.0 1E-64 2.2E-69 479.6 30.4 279 4-290 99-394 (444)
6 cd05295 MDH_like Malate dehydr 100.0 2.6E-64 5.6E-69 476.6 29.5 284 4-291 122-425 (452)
7 COG0039 Mdh Malate/lactate deh 100.0 4.8E-64 1.1E-68 454.1 28.5 270 6-291 1-283 (313)
8 cd01338 MDH_choloroplast_like 100.0 9E-63 2E-67 453.9 30.7 284 4-291 1-295 (322)
9 cd00704 MDH Malate dehydrogena 100.0 3.2E-62 6.9E-67 450.4 29.1 281 6-291 1-297 (323)
10 cd01336 MDH_cytoplasmic_cytoso 100.0 3.8E-61 8.3E-66 444.2 30.0 287 4-290 1-298 (325)
11 TIGR01758 MDH_euk_cyt malate d 100.0 2.7E-61 5.8E-66 444.5 28.5 280 7-290 1-296 (324)
12 cd05290 LDH_3 A subgroup of L- 100.0 4.4E-60 9.5E-65 433.4 28.4 267 7-290 1-284 (307)
13 KOG1495 Lactate dehydrogenase 100.0 2.6E-59 5.7E-64 405.3 24.1 271 5-294 20-309 (332)
14 PLN00135 malate dehydrogenase 100.0 6.3E-59 1.4E-63 424.9 27.3 265 25-291 2-279 (309)
15 TIGR01756 LDH_protist lactate 100.0 9.5E-59 2.1E-63 424.7 25.8 264 22-290 2-282 (313)
16 TIGR01771 L-LDH-NAD L-lactate 100.0 2.6E-58 5.6E-63 420.8 26.9 264 10-290 1-279 (299)
17 PRK00066 ldh L-lactate dehydro 100.0 1E-57 2.2E-62 419.9 29.2 272 1-290 2-287 (315)
18 cd05293 LDH_1 A subgroup of L- 100.0 1.6E-57 3.4E-62 417.7 30.1 270 4-290 2-288 (312)
19 PLN02602 lactate dehydrogenase 100.0 1.8E-57 3.9E-62 421.9 29.9 266 6-289 38-322 (350)
20 cd05291 HicDH_like L-2-hydroxy 100.0 7.5E-56 1.6E-60 407.1 28.9 267 6-289 1-281 (306)
21 cd00300 LDH_like L-lactate deh 100.0 4.2E-55 9E-60 400.7 29.1 265 8-290 1-277 (300)
22 cd01337 MDH_glyoxysomal_mitoch 100.0 1.7E-53 3.6E-58 389.3 26.1 257 6-289 1-278 (310)
23 PTZ00117 malate dehydrogenase; 100.0 1.3E-52 2.7E-57 387.1 30.8 268 4-290 4-289 (319)
24 cd05294 LDH-like_MDH_nadp A la 100.0 3.4E-52 7.5E-57 382.6 28.7 270 6-290 1-284 (309)
25 TIGR01772 MDH_euk_gproteo mala 100.0 2.6E-52 5.6E-57 382.1 25.0 251 7-283 1-271 (312)
26 cd05292 LDH_2 A subgroup of L- 100.0 9.7E-52 2.1E-56 379.8 27.9 267 6-290 1-283 (308)
27 PTZ00082 L-lactate dehydrogena 100.0 2.3E-51 4.9E-56 378.5 30.0 273 1-291 1-296 (321)
28 TIGR01763 MalateDH_bact malate 100.0 6.1E-51 1.3E-55 373.6 27.6 265 6-290 2-280 (305)
29 PLN00106 malate dehydrogenase 100.0 1.6E-49 3.4E-54 365.0 28.7 263 4-291 17-299 (323)
30 PTZ00325 malate dehydrogenase; 100.0 7.8E-49 1.7E-53 360.2 28.3 259 4-290 7-287 (321)
31 cd01339 LDH-like_MDH L-lactate 100.0 1.2E-48 2.7E-53 358.4 28.3 262 8-290 1-276 (300)
32 PRK06223 malate dehydrogenase; 100.0 2E-48 4.3E-53 358.2 29.4 264 6-290 3-280 (307)
33 PRK05086 malate dehydrogenase; 100.0 1.1E-47 2.5E-52 352.8 27.8 259 6-291 1-281 (312)
34 cd00650 LDH_MDH_like NAD-depen 100.0 1.1E-44 2.3E-49 326.5 25.7 230 8-291 1-241 (263)
35 KOG1494 NAD-dependent malate d 100.0 7.2E-38 1.6E-42 273.1 17.2 260 4-288 27-307 (345)
36 PF00056 Ldh_1_N: lactate/mala 100.0 2.8E-32 6E-37 223.2 16.3 141 6-155 1-141 (141)
37 PF02866 Ldh_1_C: lactate/mala 100.0 6.2E-28 1.3E-32 204.5 11.2 129 157-290 1-144 (174)
38 cd05197 GH4_glycoside_hydrolas 99.9 3.4E-24 7.4E-29 204.2 16.1 187 6-213 1-213 (425)
39 PRK15076 alpha-galactosidase; 99.9 4.6E-22 1E-26 190.2 17.0 176 6-201 2-208 (431)
40 cd05296 GH4_P_beta_glucosidase 99.9 6.7E-22 1.5E-26 188.2 17.7 180 6-201 1-205 (419)
41 cd05298 GH4_GlvA_pagL_like Gly 99.9 9.8E-20 2.1E-24 174.0 25.1 180 6-201 1-205 (437)
42 cd05297 GH4_alpha_glucosidase_ 99.8 2.8E-19 6E-24 171.2 18.4 178 6-201 1-206 (423)
43 PF02056 Glyco_hydro_4: Family 99.7 1.9E-16 4.2E-21 133.9 14.5 156 7-174 1-183 (183)
44 COG1486 CelF Alpha-galactosida 99.7 9.9E-17 2.2E-21 150.8 13.7 183 3-201 1-209 (442)
45 KOG1502 Flavonol reductase/cin 99.3 9.6E-12 2.1E-16 113.6 12.3 173 4-186 5-196 (327)
46 PRK15181 Vi polysaccharide bio 99.1 3.6E-10 7.8E-15 105.7 11.9 175 4-189 14-200 (348)
47 PF01073 3Beta_HSD: 3-beta hyd 99.1 2.5E-10 5.5E-15 103.8 7.6 116 9-136 1-119 (280)
48 PLN02166 dTDP-glucose 4,6-dehy 99.1 2E-09 4.3E-14 103.9 13.5 170 3-188 118-297 (436)
49 COG1087 GalE UDP-glucose 4-epi 99.0 1.5E-09 3.3E-14 97.4 10.4 160 6-188 1-176 (329)
50 PLN02206 UDP-glucuronate decar 99.0 5.3E-09 1.2E-13 101.1 13.7 170 4-188 118-296 (442)
51 PLN02695 GDP-D-mannose-3',5'-e 99.0 2.3E-09 5E-14 101.3 10.8 172 3-189 19-202 (370)
52 PLN00198 anthocyanidin reducta 99.0 4.3E-09 9.3E-14 97.8 12.5 176 4-189 8-203 (338)
53 PLN02650 dihydroflavonol-4-red 99.0 2.7E-09 5.9E-14 99.7 10.9 178 1-189 1-198 (351)
54 PLN02427 UDP-apiose/xylose syn 99.0 1.7E-09 3.7E-14 102.5 9.2 172 4-189 13-217 (386)
55 PRK07066 3-hydroxybutyryl-CoA 98.9 4.8E-09 1E-13 96.9 10.0 170 5-201 7-204 (321)
56 PLN02662 cinnamyl-alcohol dehy 98.9 7.6E-09 1.6E-13 95.2 11.1 172 4-188 3-196 (322)
57 PLN02572 UDP-sulfoquinovose sy 98.9 1.3E-08 2.9E-13 98.3 12.2 179 4-190 46-264 (442)
58 PLN02989 cinnamyl-alcohol dehy 98.9 1.3E-08 2.9E-13 93.9 11.5 177 1-188 1-198 (325)
59 PLN02986 cinnamyl-alcohol dehy 98.9 1.3E-08 2.9E-13 93.8 11.5 177 1-188 1-197 (322)
60 PLN02214 cinnamoyl-CoA reducta 98.9 1.2E-08 2.6E-13 95.3 11.3 172 4-189 9-196 (342)
61 PF02737 3HCDH_N: 3-hydroxyacy 98.9 1E-08 2.3E-13 87.2 9.9 102 7-135 1-116 (180)
62 PF02719 Polysacc_synt_2: Poly 98.9 2.1E-09 4.5E-14 97.3 5.8 172 8-211 1-193 (293)
63 COG0451 WcaG Nucleoside-diphos 98.9 1.8E-08 3.9E-13 91.9 11.0 164 7-192 2-180 (314)
64 TIGR01472 gmd GDP-mannose 4,6- 98.9 1.1E-08 2.3E-13 95.4 9.5 173 6-187 1-189 (343)
65 TIGR03589 PseB UDP-N-acetylglu 98.8 2.9E-08 6.3E-13 92.0 11.7 172 4-197 3-180 (324)
66 PRK08125 bifunctional UDP-gluc 98.8 2.2E-08 4.7E-13 101.5 11.5 170 4-189 314-498 (660)
67 PRK07819 3-hydroxybutyryl-CoA 98.8 4.9E-08 1.1E-12 89.1 12.4 171 1-200 1-205 (286)
68 PRK11908 NAD-dependent epimera 98.8 2.5E-08 5.3E-13 93.1 10.6 166 6-188 2-183 (347)
69 PLN02896 cinnamyl-alcohol dehy 98.8 4.9E-08 1.1E-12 91.4 11.9 176 4-189 9-211 (353)
70 PRK11150 rfaD ADP-L-glycero-D- 98.8 6E-08 1.3E-12 88.8 11.8 163 8-189 2-175 (308)
71 COG1250 FadB 3-hydroxyacyl-CoA 98.8 1.9E-08 4E-13 92.0 8.2 173 5-206 3-207 (307)
72 TIGR02622 CDP_4_6_dhtase CDP-g 98.8 2.7E-08 5.9E-13 93.0 9.2 173 5-188 4-193 (349)
73 PRK10217 dTDP-glucose 4,6-dehy 98.8 5.5E-08 1.2E-12 90.9 10.7 175 6-189 2-195 (355)
74 PRK10084 dTDP-glucose 4,6 dehy 98.7 5.7E-08 1.2E-12 90.7 10.6 175 6-189 1-202 (352)
75 PRK09987 dTDP-4-dehydrorhamnos 98.7 3.7E-08 8.1E-13 90.2 9.0 157 6-194 1-164 (299)
76 PLN02240 UDP-glucose 4-epimera 98.7 6.5E-08 1.4E-12 90.2 9.9 177 1-188 1-191 (352)
77 PLN02686 cinnamoyl-CoA reducta 98.7 4.2E-08 9.1E-13 92.6 8.0 172 4-188 52-250 (367)
78 TIGR03466 HpnA hopanoid-associ 98.7 9.1E-08 2E-12 87.9 9.5 168 6-188 1-175 (328)
79 COG1086 Predicted nucleoside-d 98.7 1.4E-07 3E-12 91.4 10.9 176 4-211 249-441 (588)
80 PLN02583 cinnamoyl-CoA reducta 98.7 1.8E-07 3.8E-12 85.7 11.2 178 2-188 3-197 (297)
81 PRK11730 fadB multifunctional 98.7 1.1E-07 2.3E-12 97.2 10.6 166 6-200 314-511 (715)
82 PLN02260 probable rhamnose bio 98.7 1.1E-07 2.3E-12 96.7 10.6 178 4-189 5-194 (668)
83 TIGR01181 dTDP_gluc_dehyt dTDP 98.7 2.9E-07 6.3E-12 83.9 12.5 174 7-188 1-184 (317)
84 TIGR02440 FadJ fatty oxidation 98.6 1.5E-07 3.2E-12 95.9 10.6 167 5-200 304-503 (699)
85 TIGR02437 FadB fatty oxidation 98.6 1.5E-07 3.2E-12 96.0 10.6 168 5-201 313-512 (714)
86 TIGR02441 fa_ox_alpha_mit fatt 98.6 1.3E-07 2.7E-12 96.8 10.0 168 5-201 335-534 (737)
87 PLN02778 3,5-epimerase/4-reduc 98.6 2.5E-07 5.4E-12 84.9 10.6 139 5-175 9-162 (298)
88 PLN02653 GDP-mannose 4,6-dehyd 98.6 1.5E-07 3.3E-12 87.5 9.0 175 4-187 5-195 (340)
89 PRK11154 fadJ multifunctional 98.6 1.9E-07 4E-12 95.3 10.3 168 5-201 309-509 (708)
90 PRK08293 3-hydroxybutyryl-CoA 98.6 5.5E-07 1.2E-11 82.2 12.3 168 5-199 3-203 (287)
91 PRK10675 UDP-galactose-4-epime 98.6 3.7E-07 8E-12 84.6 11.1 173 6-188 1-184 (338)
92 KOG1430 C-3 sterol dehydrogena 98.6 1.5E-07 3.2E-12 87.8 8.2 176 3-187 2-186 (361)
93 KOG1429 dTDP-glucose 4-6-dehyd 98.6 1.3E-07 2.8E-12 84.3 6.8 170 4-189 26-205 (350)
94 CHL00194 ycf39 Ycf39; Provisio 98.6 2.5E-07 5.5E-12 85.4 9.1 109 6-132 1-110 (317)
95 PF01370 Epimerase: NAD depend 98.5 7.5E-08 1.6E-12 84.1 4.2 159 8-188 1-174 (236)
96 PRK05808 3-hydroxybutyryl-CoA 98.5 9E-07 2E-11 80.5 11.3 166 6-200 4-201 (282)
97 PLN02725 GDP-4-keto-6-deoxyman 98.5 7.2E-07 1.6E-11 81.3 9.2 152 9-189 1-165 (306)
98 COG1004 Ugd Predicted UDP-gluc 98.5 3.6E-06 7.8E-11 78.6 13.8 114 6-136 1-126 (414)
99 KOG2304 3-hydroxyacyl-CoA dehy 98.4 2.2E-07 4.7E-12 80.2 4.7 158 5-190 11-204 (298)
100 PRK05865 hypothetical protein; 98.4 2.2E-06 4.8E-11 88.4 12.6 101 6-134 1-105 (854)
101 PF01210 NAD_Gly3P_dh_N: NAD-d 98.4 1.5E-06 3.2E-11 72.3 9.3 97 7-131 1-103 (157)
102 PRK08268 3-hydroxy-acyl-CoA de 98.4 4.2E-06 9.1E-11 82.3 13.6 150 4-180 6-186 (507)
103 PRK09135 pteridine reductase; 98.4 5.4E-06 1.2E-10 72.9 13.2 154 3-173 4-175 (249)
104 PRK07530 3-hydroxybutyryl-CoA 98.4 3.5E-06 7.6E-11 77.0 11.5 106 3-135 2-121 (292)
105 PLN02545 3-hydroxybutyryl-CoA 98.4 8.1E-06 1.8E-10 74.7 13.5 104 5-135 4-121 (295)
106 PRK06035 3-hydroxyacyl-CoA deh 98.4 5E-06 1.1E-10 76.0 12.1 104 5-135 3-123 (291)
107 PRK06194 hypothetical protein; 98.3 5.5E-06 1.2E-10 74.9 11.8 162 4-183 5-190 (287)
108 PF03721 UDPG_MGDP_dh_N: UDP-g 98.3 3E-06 6.6E-11 72.4 9.4 108 6-130 1-118 (185)
109 PRK09260 3-hydroxybutyryl-CoA 98.3 4.4E-06 9.5E-11 76.3 11.1 167 6-200 2-200 (288)
110 PLN03209 translocon at the inn 98.3 3.2E-06 6.9E-11 83.4 10.4 118 4-132 79-208 (576)
111 TIGR01214 rmlD dTDP-4-dehydror 98.3 3.1E-06 6.8E-11 76.5 9.5 147 7-189 1-155 (287)
112 PF13460 NAD_binding_10: NADH( 98.3 3.1E-06 6.7E-11 71.4 8.7 98 8-132 1-98 (183)
113 TIGR01777 yfcH conserved hypot 98.3 2.9E-06 6.2E-11 76.6 8.9 98 8-122 1-102 (292)
114 PRK06130 3-hydroxybutyryl-CoA 98.3 1E-05 2.2E-10 74.5 12.5 105 5-135 4-117 (311)
115 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.3 7.3E-06 1.6E-10 80.5 11.6 167 4-199 4-202 (503)
116 PRK07531 bifunctional 3-hydrox 98.2 1.2E-05 2.7E-10 78.9 12.4 105 6-136 5-119 (495)
117 PRK07231 fabG 3-ketoacyl-(acyl 98.2 1.5E-05 3.3E-10 70.2 11.1 155 1-173 1-173 (251)
118 TIGR02197 heptose_epim ADP-L-g 98.2 9.3E-06 2E-10 74.2 9.7 166 8-189 1-175 (314)
119 PRK06129 3-hydroxyacyl-CoA deh 98.2 2E-05 4.3E-10 72.7 11.7 104 6-135 3-120 (308)
120 PLN02657 3,8-divinyl protochlo 98.2 8.8E-06 1.9E-10 77.5 9.4 115 4-132 59-182 (390)
121 PRK12320 hypothetical protein; 98.2 8.7E-06 1.9E-10 82.4 9.8 101 6-131 1-101 (699)
122 PRK07856 short chain dehydroge 98.2 1.7E-05 3.7E-10 70.4 10.6 154 1-174 2-168 (252)
123 TIGR01915 npdG NADPH-dependent 98.2 3.1E-05 6.7E-10 67.9 11.8 103 6-135 1-105 (219)
124 PRK07201 short chain dehydroge 98.1 1.3E-05 2.9E-10 81.0 10.7 169 6-188 1-182 (657)
125 PRK12936 3-ketoacyl-(acyl-carr 98.1 4E-05 8.7E-10 67.3 12.5 152 2-172 3-170 (245)
126 PRK07067 sorbitol dehydrogenas 98.1 4.9E-05 1.1E-09 67.5 13.0 153 3-173 4-172 (257)
127 PLN02253 xanthoxin dehydrogena 98.1 3.8E-05 8.3E-10 69.2 12.4 154 4-175 17-189 (280)
128 PRK07806 short chain dehydroge 98.1 8.5E-06 1.8E-10 71.9 7.8 169 1-183 1-180 (248)
129 TIGR01179 galE UDP-glucose-4-e 98.1 1.1E-05 2.3E-10 73.9 8.4 169 7-188 1-180 (328)
130 PRK12746 short chain dehydroge 98.1 0.0001 2.2E-09 65.2 14.5 155 1-173 1-179 (254)
131 PRK05717 oxidoreductase; Valid 98.1 3.3E-05 7.2E-10 68.6 11.3 152 5-174 10-177 (255)
132 PRK06180 short chain dehydroge 98.1 6.6E-05 1.4E-09 67.7 13.4 151 4-172 3-168 (277)
133 KOG1371 UDP-glucose 4-epimeras 98.1 7.9E-06 1.7E-10 74.4 7.2 169 5-188 2-187 (343)
134 PRK05653 fabG 3-ketoacyl-(acyl 98.1 2.4E-05 5.1E-10 68.5 10.1 152 1-172 1-172 (246)
135 PRK08642 fabG 3-ketoacyl-(acyl 98.1 5.4E-05 1.2E-09 66.8 12.2 157 1-174 1-179 (253)
136 PRK06500 short chain dehydroge 98.1 3.1E-05 6.8E-10 68.2 10.5 152 3-172 4-168 (249)
137 PRK13394 3-hydroxybutyrate deh 98.1 7.2E-05 1.6E-09 66.4 12.8 157 4-181 6-182 (262)
138 PRK10538 malonic semialdehyde 98.1 5.7E-05 1.2E-09 66.9 11.9 148 6-173 1-166 (248)
139 TIGR03325 BphB_TodD cis-2,3-di 98.1 2.8E-05 6.2E-10 69.4 10.0 156 1-174 1-175 (262)
140 COG4221 Short-chain alcohol de 98.1 0.00019 4.1E-09 63.2 14.7 160 1-182 1-179 (246)
141 PRK12937 short chain dehydroge 98.1 8.4E-05 1.8E-09 65.3 12.7 156 1-173 1-172 (245)
142 PRK08278 short chain dehydroge 98.0 7.1E-05 1.5E-09 67.5 12.4 164 1-181 2-189 (273)
143 PRK07774 short chain dehydroge 98.0 7.4E-05 1.6E-09 65.9 12.3 150 3-173 4-174 (250)
144 PRK07523 gluconate 5-dehydroge 98.0 7.1E-05 1.5E-09 66.4 12.2 151 5-173 10-178 (255)
145 PRK08264 short chain dehydroge 98.0 3.6E-05 7.8E-10 67.5 10.1 147 1-172 2-164 (238)
146 COG2085 Predicted dinucleotide 98.0 0.00025 5.4E-09 61.2 14.8 96 5-134 1-96 (211)
147 PRK05875 short chain dehydroge 98.0 7.4E-05 1.6E-09 67.1 12.2 161 2-182 4-185 (276)
148 PRK08265 short chain dehydroge 98.0 0.0001 2.2E-09 65.9 12.7 162 1-182 1-176 (261)
149 PRK06179 short chain dehydroge 98.0 7.3E-05 1.6E-09 66.9 11.8 108 4-133 3-133 (270)
150 PRK07326 short chain dehydroge 98.0 8E-05 1.7E-09 65.1 11.6 122 3-133 4-141 (237)
151 PRK06138 short chain dehydroge 98.0 4.7E-05 1E-09 67.2 10.1 152 1-172 1-171 (252)
152 PRK06182 short chain dehydroge 98.0 7.9E-05 1.7E-09 66.9 11.7 114 5-132 3-133 (273)
153 PRK05557 fabG 3-ketoacyl-(acyl 98.0 8E-05 1.7E-09 65.2 11.2 125 1-133 1-143 (248)
154 PF04321 RmlD_sub_bind: RmlD s 98.0 1.1E-05 2.4E-10 73.6 5.6 156 6-195 1-162 (286)
155 PRK06482 short chain dehydroge 98.0 8.2E-05 1.8E-09 66.9 11.2 147 6-172 3-166 (276)
156 COG0240 GpsA Glycerol-3-phosph 98.0 0.0002 4.3E-09 66.0 13.6 110 5-144 1-123 (329)
157 PRK06398 aldose dehydrogenase; 98.0 0.0002 4.3E-09 63.9 13.5 149 3-173 4-163 (258)
158 PRK07890 short chain dehydroge 98.0 0.00014 3.1E-09 64.4 12.5 154 1-172 1-172 (258)
159 PLN02353 probable UDP-glucose 98.0 6.2E-05 1.4E-09 73.3 10.9 119 6-135 2-132 (473)
160 PRK06171 sorbitol-6-phosphate 98.0 7.1E-05 1.5E-09 66.9 10.4 155 2-180 6-182 (266)
161 PRK06935 2-deoxy-D-gluconate 3 97.9 0.00011 2.4E-09 65.3 11.6 154 4-180 14-187 (258)
162 PRK06128 oxidoreductase; Provi 97.9 0.0002 4.4E-09 65.4 13.6 153 5-173 55-224 (300)
163 PRK06550 fabG 3-ketoacyl-(acyl 97.9 0.00025 5.4E-09 62.0 13.5 153 1-181 1-165 (235)
164 PRK12429 3-hydroxybutyrate deh 97.9 0.00012 2.6E-09 64.8 11.5 119 4-133 3-141 (258)
165 TIGR01832 kduD 2-deoxy-D-gluco 97.9 0.00019 4.1E-09 63.3 12.8 155 1-173 1-172 (248)
166 PLN02260 probable rhamnose bio 97.9 9.2E-05 2E-09 75.3 12.1 144 4-188 379-541 (668)
167 PRK07069 short chain dehydroge 97.9 0.00062 1.4E-08 59.9 16.0 155 7-180 1-177 (251)
168 PRK08643 acetoin reductase; Va 97.9 0.00028 6.1E-09 62.5 13.7 154 6-180 3-176 (256)
169 PRK06172 short chain dehydroge 97.9 0.00017 3.7E-09 63.8 12.3 156 4-181 6-182 (253)
170 COG0300 DltE Short-chain dehyd 97.9 0.0002 4.2E-09 64.4 12.5 171 3-197 4-195 (265)
171 TIGR03026 NDP-sugDHase nucleot 97.9 0.00011 2.5E-09 70.4 11.8 79 6-94 1-89 (411)
172 PRK05993 short chain dehydroge 97.9 0.00012 2.6E-09 66.1 11.3 143 6-172 5-166 (277)
173 PRK07478 short chain dehydroge 97.9 0.0003 6.4E-09 62.4 13.5 154 1-173 2-176 (254)
174 PRK12939 short chain dehydroge 97.9 0.00042 9E-09 60.9 14.3 152 4-173 6-175 (250)
175 PRK07825 short chain dehydroge 97.9 0.00019 4E-09 64.5 12.2 151 1-172 1-168 (273)
176 PRK07576 short chain dehydroge 97.9 9.1E-05 2E-09 66.4 10.1 153 3-173 7-176 (264)
177 PF03446 NAD_binding_2: NAD bi 97.9 0.00018 4E-09 60.0 11.2 64 5-88 1-64 (163)
178 PRK08219 short chain dehydroge 97.9 0.00018 3.8E-09 62.4 11.6 115 5-133 3-130 (227)
179 PRK09072 short chain dehydroge 97.9 0.00032 6.9E-09 62.6 13.5 122 1-133 1-140 (263)
180 PRK12826 3-ketoacyl-(acyl-carr 97.9 9.3E-05 2E-09 65.1 9.9 119 4-133 5-143 (251)
181 PRK07814 short chain dehydroge 97.9 0.00051 1.1E-08 61.4 14.6 151 4-173 9-179 (263)
182 PRK08263 short chain dehydroge 97.9 0.00013 2.8E-09 65.7 10.8 147 6-172 4-167 (275)
183 PRK06077 fabG 3-ketoacyl-(acyl 97.9 0.00025 5.4E-09 62.5 12.5 156 1-173 2-173 (252)
184 PLN00141 Tic62-NAD(P)-related 97.9 4.7E-05 1E-09 67.8 7.8 115 4-132 16-132 (251)
185 PLN02996 fatty acyl-CoA reduct 97.9 0.00028 6.1E-09 69.3 13.9 122 5-132 11-161 (491)
186 PRK07060 short chain dehydroge 97.9 0.00015 3.2E-09 63.7 10.8 149 4-172 8-168 (245)
187 COG2910 Putative NADH-flavin r 97.9 0.00011 2.4E-09 62.0 9.2 99 6-132 1-105 (211)
188 PRK12747 short chain dehydroge 97.9 0.00087 1.9E-08 59.3 15.7 153 4-173 3-177 (252)
189 PRK12823 benD 1,6-dihydroxycyc 97.9 0.00022 4.7E-09 63.4 11.7 147 4-173 7-174 (260)
190 PRK05565 fabG 3-ketoacyl-(acyl 97.8 0.00026 5.5E-09 62.1 12.1 125 1-134 1-144 (247)
191 PRK05786 fabG 3-ketoacyl-(acyl 97.8 9.7E-05 2.1E-09 64.6 9.3 39 1-46 1-39 (238)
192 PRK08220 2,3-dihydroxybenzoate 97.8 0.00022 4.8E-09 62.9 11.6 156 3-180 6-172 (252)
193 COG1088 RfbB dTDP-D-glucose 4, 97.8 0.00014 3E-09 65.7 10.1 177 6-194 1-189 (340)
194 PRK00094 gpsA NAD(P)H-dependen 97.8 0.00021 4.5E-09 66.0 11.8 104 6-135 2-109 (325)
195 COG1091 RfbD dTDP-4-dehydrorha 97.8 8.9E-05 1.9E-09 67.0 8.8 159 6-200 1-167 (281)
196 PRK12921 2-dehydropantoate 2-r 97.8 0.00012 2.7E-09 66.9 9.9 105 6-137 1-108 (305)
197 PRK06200 2,3-dihydroxy-2,3-dih 97.8 0.0002 4.4E-09 63.8 11.0 154 3-174 4-176 (263)
198 PRK06124 gluconate 5-dehydroge 97.8 0.00021 4.7E-09 63.3 11.1 121 3-134 9-149 (256)
199 PRK07666 fabG 3-ketoacyl-(acyl 97.8 0.00036 7.9E-09 61.2 12.4 122 4-134 6-145 (239)
200 TIGR03376 glycerol3P_DH glycer 97.8 0.00021 4.5E-09 66.9 11.3 81 7-88 1-89 (342)
201 PRK12742 oxidoreductase; Provi 97.8 0.00046 9.9E-09 60.3 13.0 155 1-173 1-165 (237)
202 PRK08226 short chain dehydroge 97.8 0.00031 6.7E-09 62.6 12.0 153 3-173 4-174 (263)
203 PRK08267 short chain dehydroge 97.8 0.00026 5.5E-09 63.0 11.4 157 6-183 2-176 (260)
204 TIGR01746 Thioester-redct thio 97.8 9.7E-05 2.1E-09 68.5 9.0 171 7-187 1-197 (367)
205 PRK06101 short chain dehydroge 97.8 0.00047 1E-08 60.7 12.8 149 6-173 2-160 (240)
206 PRK06463 fabG 3-ketoacyl-(acyl 97.8 0.00032 7E-09 62.2 11.9 153 4-180 6-176 (255)
207 PRK08085 gluconate 5-dehydroge 97.8 0.00031 6.8E-09 62.2 11.7 153 2-172 6-176 (254)
208 PRK08628 short chain dehydroge 97.8 0.00036 7.9E-09 61.9 12.1 153 2-173 4-172 (258)
209 PRK12829 short chain dehydroge 97.8 0.0002 4.4E-09 63.6 10.5 150 4-172 10-178 (264)
210 PRK06841 short chain dehydroge 97.8 0.00027 5.8E-09 62.6 11.2 151 4-173 14-180 (255)
211 PRK07024 short chain dehydroge 97.8 0.00026 5.7E-09 63.0 11.1 148 6-173 3-170 (257)
212 PRK05866 short chain dehydroge 97.8 0.00075 1.6E-08 61.6 14.4 151 4-173 39-211 (293)
213 PF03807 F420_oxidored: NADP o 97.8 0.00011 2.3E-09 55.5 7.4 67 7-89 1-69 (96)
214 PRK08213 gluconate 5-dehydroge 97.8 0.00048 1E-08 61.2 12.7 122 3-133 10-150 (259)
215 PRK15057 UDP-glucose 6-dehydro 97.8 0.00098 2.1E-08 63.5 15.4 76 6-92 1-84 (388)
216 PRK05876 short chain dehydroge 97.8 0.00033 7.1E-09 63.3 11.5 150 4-172 5-174 (275)
217 PRK07453 protochlorophyllide o 97.8 8.5E-05 1.8E-09 68.6 7.8 120 4-132 5-145 (322)
218 PRK07424 bifunctional sterol d 97.8 0.00017 3.7E-09 69.0 10.0 103 3-117 176-284 (406)
219 PRK08945 putative oxoacyl-(acy 97.8 0.0016 3.5E-08 57.4 15.7 155 4-180 11-189 (247)
220 PRK12744 short chain dehydroge 97.7 0.00061 1.3E-08 60.5 12.9 153 4-173 7-178 (257)
221 PRK12827 short chain dehydroge 97.7 0.0017 3.7E-08 56.9 15.6 151 4-172 5-178 (249)
222 PRK12439 NAD(P)H-dependent gly 97.7 0.00039 8.4E-09 65.1 12.0 115 3-144 5-129 (341)
223 TIGR03649 ergot_EASG ergot alk 97.7 0.00017 3.6E-09 65.3 9.2 94 7-131 1-104 (285)
224 PRK12828 short chain dehydroge 97.7 0.00017 3.6E-09 62.9 9.0 121 3-133 5-142 (239)
225 PRK06701 short chain dehydroge 97.7 0.00054 1.2E-08 62.5 12.6 122 4-133 45-183 (290)
226 PRK09134 short chain dehydroge 97.7 0.00025 5.4E-09 63.1 10.1 153 4-173 8-178 (258)
227 PRK12384 sorbitol-6-phosphate 97.7 0.0016 3.6E-08 57.7 15.4 148 6-172 3-172 (259)
228 PRK07097 gluconate 5-dehydroge 97.7 0.00052 1.1E-08 61.3 12.1 151 3-173 8-178 (265)
229 PRK07102 short chain dehydroge 97.7 0.0014 3E-08 57.6 14.8 149 6-172 2-166 (243)
230 PRK12745 3-ketoacyl-(acyl-carr 97.7 0.0005 1.1E-08 60.8 12.0 150 6-172 3-178 (256)
231 PRK06523 short chain dehydroge 97.7 0.00025 5.5E-09 63.0 10.0 152 5-180 9-176 (260)
232 PRK12935 acetoacetyl-CoA reduc 97.7 0.00078 1.7E-08 59.3 13.0 120 4-132 5-143 (247)
233 PF07993 NAD_binding_4: Male s 97.7 5.5E-05 1.2E-09 67.4 5.5 168 10-186 1-200 (249)
234 TIGR01963 PHB_DH 3-hydroxybuty 97.7 0.00041 8.9E-09 61.2 11.1 116 6-132 2-137 (255)
235 PRK06914 short chain dehydroge 97.7 0.00032 6.9E-09 63.1 10.4 146 6-171 4-170 (280)
236 PRK14620 NAD(P)H-dependent gly 97.7 0.0005 1.1E-08 63.8 12.0 104 6-135 1-110 (326)
237 PRK08229 2-dehydropantoate 2-r 97.7 0.00021 4.5E-09 66.7 9.4 106 6-136 3-112 (341)
238 PRK11064 wecC UDP-N-acetyl-D-m 97.7 0.00051 1.1E-08 66.0 12.3 107 5-131 3-119 (415)
239 PRK07985 oxidoreductase; Provi 97.7 0.00096 2.1E-08 60.9 13.6 151 6-172 50-217 (294)
240 PRK05884 short chain dehydroge 97.7 0.00065 1.4E-08 59.4 12.0 144 6-173 1-159 (223)
241 PRK07035 short chain dehydroge 97.7 0.0013 2.9E-08 58.1 14.2 159 2-180 5-182 (252)
242 PRK06196 oxidoreductase; Provi 97.7 0.00041 8.9E-09 63.9 11.3 157 5-173 26-200 (315)
243 TIGR03206 benzo_BadH 2-hydroxy 97.7 0.00054 1.2E-08 60.3 11.6 117 5-132 3-139 (250)
244 PRK12825 fabG 3-ketoacyl-(acyl 97.7 0.0011 2.5E-08 57.8 13.5 119 4-132 5-143 (249)
245 PRK06198 short chain dehydroge 97.7 0.00064 1.4E-08 60.3 11.9 154 1-173 1-176 (260)
246 PRK06113 7-alpha-hydroxysteroi 97.7 0.00083 1.8E-08 59.6 12.6 157 3-180 9-183 (255)
247 PRK12481 2-deoxy-D-gluconate 3 97.7 0.00041 8.9E-09 61.6 10.6 155 3-180 6-180 (251)
248 PRK08277 D-mannonate oxidoredu 97.7 0.00071 1.5E-08 60.8 12.3 151 4-174 9-194 (278)
249 PRK08339 short chain dehydroge 97.7 0.0047 1E-07 55.3 17.5 155 4-180 7-181 (263)
250 PRK06197 short chain dehydroge 97.7 0.00032 7E-09 64.2 9.9 159 4-173 15-197 (306)
251 PRK07063 short chain dehydroge 97.7 0.00067 1.5E-08 60.3 11.7 156 4-181 6-183 (260)
252 PRK07454 short chain dehydroge 97.7 0.00062 1.3E-08 59.7 11.4 123 1-134 1-144 (241)
253 PRK14982 acyl-ACP reductase; P 97.6 0.00037 8.1E-09 64.9 10.2 73 4-93 154-227 (340)
254 PRK08177 short chain dehydroge 97.6 0.00028 6.1E-09 61.5 9.0 151 6-173 2-166 (225)
255 PTZ00345 glycerol-3-phosphate 97.6 0.00044 9.5E-09 65.2 10.7 79 4-88 10-100 (365)
256 PRK07578 short chain dehydroge 97.6 0.0008 1.7E-08 57.4 11.4 142 6-180 1-148 (199)
257 PRK06249 2-dehydropantoate 2-r 97.6 0.0005 1.1E-08 63.5 10.6 79 1-89 1-80 (313)
258 PRK08993 2-deoxy-D-gluconate 3 97.6 0.0014 3E-08 58.2 13.1 150 3-173 8-177 (253)
259 PRK06522 2-dehydropantoate 2-r 97.6 0.00071 1.5E-08 61.8 11.5 104 6-138 1-107 (304)
260 PRK08589 short chain dehydroge 97.6 0.00069 1.5E-08 60.9 11.2 156 1-180 1-178 (272)
261 COG1090 Predicted nucleoside-d 97.6 0.00047 1E-08 61.8 9.7 168 8-199 1-181 (297)
262 PRK06924 short chain dehydroge 97.6 0.00064 1.4E-08 60.0 10.7 34 6-46 2-35 (251)
263 PRK06181 short chain dehydroge 97.6 0.00085 1.9E-08 59.7 11.5 120 6-134 2-139 (263)
264 PF05368 NmrA: NmrA-like famil 97.6 0.00046 9.9E-09 60.6 9.3 101 8-132 1-102 (233)
265 PRK07109 short chain dehydroge 97.6 0.0034 7.4E-08 58.5 15.5 158 5-182 8-185 (334)
266 PLN00016 RNA-binding protein; 97.6 0.00032 7E-09 66.4 8.7 150 4-190 51-217 (378)
267 PRK05693 short chain dehydroge 97.6 0.00083 1.8E-08 60.3 11.0 34 6-46 2-35 (274)
268 PRK08217 fabG 3-ketoacyl-(acyl 97.6 0.00093 2E-08 58.7 11.1 39 1-46 1-39 (253)
269 PRK07832 short chain dehydroge 97.6 0.0039 8.4E-08 55.9 15.3 148 6-172 1-169 (272)
270 PRK09291 short chain dehydroge 97.5 0.00059 1.3E-08 60.4 9.8 147 6-172 3-163 (257)
271 PRK12367 short chain dehydroge 97.5 0.00068 1.5E-08 60.4 10.1 103 5-118 14-119 (245)
272 PRK07577 short chain dehydroge 97.5 0.00049 1.1E-08 60.0 9.1 35 5-46 3-37 (234)
273 PRK07074 short chain dehydroge 97.5 0.0013 2.8E-08 58.3 11.9 149 6-173 3-167 (257)
274 PRK08703 short chain dehydroge 97.5 0.0056 1.2E-07 53.6 15.8 151 4-174 5-180 (239)
275 PRK05650 short chain dehydroge 97.5 0.0018 4E-08 58.0 12.9 117 6-133 1-137 (270)
276 PRK09242 tropinone reductase; 97.5 0.00091 2E-08 59.4 10.8 149 4-172 8-178 (257)
277 PLN02503 fatty acyl-CoA reduct 97.5 0.00049 1.1E-08 68.9 9.7 112 5-121 119-258 (605)
278 PRK14619 NAD(P)H-dependent gly 97.5 0.00085 1.8E-08 61.8 10.7 53 4-89 3-55 (308)
279 PRK12938 acetyacetyl-CoA reduc 97.5 0.0017 3.8E-08 57.0 12.3 150 5-173 3-172 (246)
280 PRK09186 flagellin modificatio 97.5 0.0012 2.5E-08 58.4 11.0 163 4-180 3-192 (256)
281 PLN02780 ketoreductase/ oxidor 97.5 0.0018 4E-08 59.9 12.7 151 5-173 53-227 (320)
282 PRK07023 short chain dehydroge 97.5 0.00044 9.5E-09 60.9 8.2 34 6-46 2-35 (243)
283 TIGR01830 3oxo_ACP_reduc 3-oxo 97.5 0.00085 1.9E-08 58.4 10.0 149 8-173 1-167 (239)
284 PRK08340 glucose-1-dehydrogena 97.5 0.0012 2.5E-08 58.8 11.0 155 6-181 1-176 (259)
285 PRK06123 short chain dehydroge 97.5 0.0018 4E-08 56.9 12.1 150 6-172 3-175 (248)
286 PRK07775 short chain dehydroge 97.5 0.0013 2.9E-08 59.1 11.4 148 5-172 10-177 (274)
287 PF01118 Semialdhyde_dh: Semia 97.5 0.00039 8.6E-09 55.0 6.9 73 7-89 1-74 (121)
288 PRK08261 fabG 3-ketoacyl-(acyl 97.5 0.0019 4.1E-08 62.5 12.9 120 5-133 210-344 (450)
289 PRK06484 short chain dehydroge 97.5 0.00097 2.1E-08 65.6 11.0 151 5-173 269-433 (520)
290 PRK09009 C factor cell-cell si 97.5 0.0017 3.6E-08 56.8 11.3 154 6-180 1-174 (235)
291 PRK06139 short chain dehydroge 97.5 0.0022 4.9E-08 59.7 12.7 151 3-173 5-175 (330)
292 PRK05867 short chain dehydroge 97.4 0.0007 1.5E-08 60.0 9.0 158 3-180 7-185 (253)
293 PRK07679 pyrroline-5-carboxyla 97.4 0.002 4.3E-08 58.5 12.0 72 4-89 2-73 (279)
294 PRK15182 Vi polysaccharide bio 97.4 0.0021 4.5E-08 62.0 12.6 76 3-94 4-89 (425)
295 TIGR02632 RhaD_aldol-ADH rhamn 97.4 0.0013 2.8E-08 67.2 11.8 150 5-173 414-585 (676)
296 PRK08655 prephenate dehydrogen 97.4 0.0023 5E-08 61.9 12.9 66 6-89 1-66 (437)
297 PRK06949 short chain dehydroge 97.4 0.0039 8.5E-08 55.1 13.5 36 4-46 8-43 (258)
298 PRK06114 short chain dehydroge 97.4 0.00075 1.6E-08 59.9 8.8 159 3-180 6-184 (254)
299 PRK08063 enoyl-(acyl carrier p 97.4 0.0026 5.6E-08 56.0 12.1 151 4-172 3-172 (250)
300 PRK07502 cyclohexadienyl dehyd 97.4 0.0013 2.8E-08 60.5 10.3 73 1-89 1-74 (307)
301 PRK07904 short chain dehydroge 97.4 0.0031 6.8E-08 56.1 12.4 120 4-133 7-147 (253)
302 PRK06483 dihydromonapterin red 97.4 0.0049 1.1E-07 53.9 13.3 147 6-173 3-167 (236)
303 PRK14618 NAD(P)H-dependent gly 97.4 0.001 2.2E-08 61.8 9.3 75 5-89 4-82 (328)
304 COG1748 LYS9 Saccharopine dehy 97.4 0.0021 4.6E-08 60.8 11.5 103 5-136 1-104 (389)
305 KOG1205 Predicted dehydrogenas 97.3 0.0068 1.5E-07 55.0 14.0 157 4-180 11-189 (282)
306 PRK08416 7-alpha-hydroxysteroi 97.3 0.011 2.3E-07 52.7 15.1 151 4-173 7-184 (260)
307 PRK05855 short chain dehydroge 97.3 0.0027 5.9E-08 62.8 12.4 151 4-173 314-484 (582)
308 PRK08324 short chain dehydroge 97.3 0.0016 3.4E-08 66.6 10.7 150 5-173 422-590 (681)
309 PRK07680 late competence prote 97.3 0.003 6.6E-08 57.1 11.5 100 6-135 1-100 (273)
310 PRK08415 enoyl-(acyl carrier p 97.3 0.0018 3.9E-08 58.6 9.9 161 1-180 1-181 (274)
311 PRK06947 glucose-1-dehydrogena 97.3 0.0037 8.1E-08 54.9 11.8 151 6-173 3-176 (248)
312 TIGR02415 23BDH acetoin reduct 97.3 0.0069 1.5E-07 53.4 13.5 149 6-173 1-169 (254)
313 PRK07417 arogenate dehydrogena 97.3 0.0017 3.6E-08 59.0 9.6 65 6-89 1-65 (279)
314 PRK08269 3-hydroxybutyryl-CoA 97.3 0.0017 3.7E-08 60.1 9.7 140 17-179 1-178 (314)
315 PRK12743 oxidoreductase; Provi 97.3 0.011 2.3E-07 52.5 14.6 150 6-173 3-172 (256)
316 PRK07634 pyrroline-5-carboxyla 97.3 0.0044 9.6E-08 54.9 12.0 73 3-89 2-74 (245)
317 PRK12824 acetoacetyl-CoA reduc 97.3 0.0031 6.8E-08 55.1 11.0 118 6-133 3-140 (245)
318 PRK06057 short chain dehydroge 97.3 0.0017 3.6E-08 57.6 9.2 36 4-46 6-41 (255)
319 PRK08251 short chain dehydroge 97.3 0.0077 1.7E-07 52.9 13.3 116 6-132 3-140 (248)
320 PRK06484 short chain dehydroge 97.3 0.0024 5.1E-08 62.9 11.0 123 1-133 1-142 (520)
321 PRK07792 fabG 3-ketoacyl-(acyl 97.3 0.0023 4.9E-08 58.8 10.2 158 4-180 11-192 (306)
322 PRK05872 short chain dehydroge 97.2 0.0022 4.8E-08 58.5 9.8 120 4-132 8-143 (296)
323 COG1893 ApbA Ketopantoate redu 97.2 0.0026 5.7E-08 58.7 10.2 124 6-158 1-125 (307)
324 PRK07889 enoyl-(acyl carrier p 97.2 0.0039 8.6E-08 55.5 11.1 153 4-173 6-177 (256)
325 PRK05854 short chain dehydroge 97.2 0.0024 5.2E-08 58.8 10.0 166 4-181 13-202 (313)
326 PRK06928 pyrroline-5-carboxyla 97.2 0.0043 9.2E-08 56.4 11.1 101 6-135 2-102 (277)
327 PRK06125 short chain dehydroge 97.2 0.0099 2.1E-07 52.8 13.3 118 4-132 6-140 (259)
328 PLN02688 pyrroline-5-carboxyla 97.2 0.005 1.1E-07 55.3 11.4 68 6-89 1-69 (266)
329 PRK07533 enoyl-(acyl carrier p 97.2 0.0047 1E-07 55.1 11.1 154 3-173 8-181 (258)
330 PRK08936 glucose-1-dehydrogena 97.2 0.028 6.2E-07 49.9 16.1 157 4-180 6-182 (261)
331 TIGR02685 pter_reduc_Leis pter 97.2 0.015 3.2E-07 52.0 14.2 32 6-44 2-33 (267)
332 PRK12748 3-ketoacyl-(acyl-carr 97.1 0.0038 8.3E-08 55.3 10.2 38 1-45 1-40 (256)
333 PRK06953 short chain dehydroge 97.1 0.0024 5.1E-08 55.5 8.7 115 6-133 2-131 (222)
334 PRK07062 short chain dehydroge 97.1 0.03 6.5E-07 49.8 15.9 118 5-133 8-147 (265)
335 PRK12491 pyrroline-5-carboxyla 97.1 0.0053 1.1E-07 55.7 10.9 69 6-89 3-71 (272)
336 PRK11880 pyrroline-5-carboxyla 97.1 0.0045 9.8E-08 55.6 10.4 69 5-89 2-70 (267)
337 PRK07201 short chain dehydroge 97.1 0.0041 8.8E-08 63.0 11.1 148 5-172 371-540 (657)
338 TIGR01829 AcAcCoA_reduct aceto 97.1 0.0052 1.1E-07 53.6 10.5 117 7-133 2-138 (242)
339 COG2084 MmsB 3-hydroxyisobutyr 97.1 0.0049 1.1E-07 56.1 10.3 65 6-89 1-65 (286)
340 PRK07370 enoyl-(acyl carrier p 97.0 0.006 1.3E-07 54.4 10.5 160 3-180 4-185 (258)
341 TIGR00872 gnd_rel 6-phosphoglu 97.0 0.0035 7.7E-08 57.5 9.2 95 6-133 1-95 (298)
342 PRK08862 short chain dehydroge 97.0 0.053 1.1E-06 47.5 16.3 151 1-173 1-173 (227)
343 TIGR01505 tartro_sem_red 2-hyd 97.0 0.0046 1E-07 56.4 9.8 63 7-89 1-63 (291)
344 PRK11559 garR tartronate semia 97.0 0.008 1.7E-07 54.9 11.3 64 6-89 3-66 (296)
345 PRK12549 shikimate 5-dehydroge 97.0 0.0046 1E-07 56.4 9.6 77 5-92 127-205 (284)
346 PRK06545 prephenate dehydrogen 97.0 0.0047 1E-07 58.2 9.9 68 6-89 1-68 (359)
347 PRK07831 short chain dehydroge 97.0 0.0091 2E-07 53.1 11.2 155 5-180 17-194 (262)
348 TIGR01831 fabG_rel 3-oxoacyl-( 97.0 0.0083 1.8E-07 52.4 10.6 118 8-134 1-138 (239)
349 PF02558 ApbA: Ketopantoate re 97.0 0.0031 6.6E-08 51.5 7.2 120 8-158 1-125 (151)
350 PRK08017 oxidoreductase; Provi 97.0 0.0066 1.4E-07 53.6 9.9 33 6-45 3-35 (256)
351 PRK08594 enoyl-(acyl carrier p 96.9 0.019 4.1E-07 51.2 12.8 154 4-173 6-180 (257)
352 COG0287 TyrA Prephenate dehydr 96.9 0.015 3.2E-07 53.0 12.0 68 5-89 3-72 (279)
353 PRK15461 NADH-dependent gamma- 96.9 0.0054 1.2E-07 56.2 9.3 64 6-89 2-65 (296)
354 PRK07677 short chain dehydroge 96.9 0.03 6.4E-07 49.5 13.8 149 6-173 2-170 (252)
355 PF10727 Rossmann-like: Rossma 96.9 0.0014 3.1E-08 52.4 4.7 101 5-140 10-115 (127)
356 PTZ00142 6-phosphogluconate de 96.9 0.015 3.2E-07 56.9 12.5 100 6-134 2-104 (470)
357 PRK07984 enoyl-(acyl carrier p 96.9 0.011 2.4E-07 53.0 11.0 159 1-180 1-183 (262)
358 PRK06079 enoyl-(acyl carrier p 96.9 0.0096 2.1E-07 52.9 10.4 154 1-173 1-176 (252)
359 PRK07791 short chain dehydroge 96.9 0.0098 2.1E-07 54.0 10.6 35 4-45 5-39 (286)
360 PRK05599 hypothetical protein; 96.9 0.036 7.9E-07 49.0 14.0 153 6-180 1-174 (246)
361 PRK06940 short chain dehydroge 96.9 0.0049 1.1E-07 55.6 8.5 116 7-134 4-128 (275)
362 PF00106 adh_short: short chai 96.9 0.011 2.5E-07 48.4 9.9 121 7-135 2-138 (167)
363 PRK12480 D-lactate dehydrogena 96.8 0.0085 1.8E-07 55.9 10.0 62 4-89 145-206 (330)
364 KOG2711 Glycerol-3-phosphate d 96.8 0.027 5.9E-07 52.0 12.7 106 3-129 19-137 (372)
365 COG0569 TrkA K+ transport syst 96.8 0.0044 9.6E-08 54.6 7.4 33 6-46 1-33 (225)
366 PRK08507 prephenate dehydrogen 96.8 0.016 3.4E-07 52.5 11.0 66 6-89 1-66 (275)
367 PRK08159 enoyl-(acyl carrier p 96.8 0.016 3.4E-07 52.3 10.9 157 5-180 10-186 (272)
368 PRK06505 enoyl-(acyl carrier p 96.8 0.015 3.3E-07 52.4 10.8 156 4-180 6-183 (271)
369 PRK11199 tyrA bifunctional cho 96.7 0.011 2.3E-07 56.2 9.8 53 5-89 98-150 (374)
370 PF01488 Shikimate_DH: Shikima 96.7 0.0087 1.9E-07 48.3 7.9 76 4-92 11-86 (135)
371 PRK06728 aspartate-semialdehyd 96.7 0.0065 1.4E-07 56.9 8.0 77 1-90 1-77 (347)
372 PF01113 DapB_N: Dihydrodipico 96.7 0.018 4E-07 45.7 9.6 73 6-88 1-74 (124)
373 TIGR03443 alpha_am_amid L-amin 96.7 0.0083 1.8E-07 66.0 10.1 175 5-187 971-1182(1389)
374 PRK12490 6-phosphogluconate de 96.7 0.02 4.3E-07 52.6 10.9 64 6-89 1-67 (299)
375 smart00822 PKS_KR This enzymat 96.6 0.0075 1.6E-07 49.3 7.3 116 7-132 2-136 (180)
376 PLN02256 arogenate dehydrogena 96.6 0.017 3.7E-07 53.2 10.4 65 4-89 35-100 (304)
377 cd01078 NAD_bind_H4MPT_DH NADP 96.6 0.011 2.5E-07 50.4 8.5 75 4-90 27-106 (194)
378 PRK05708 2-dehydropantoate 2-r 96.6 0.032 7E-07 51.4 11.7 120 5-156 2-125 (305)
379 PRK06603 enoyl-(acyl carrier p 96.6 0.049 1.1E-06 48.6 12.7 156 4-180 7-184 (260)
380 PTZ00431 pyrroline carboxylate 96.6 0.03 6.6E-07 50.3 11.2 62 5-88 3-64 (260)
381 PRK06997 enoyl-(acyl carrier p 96.6 0.05 1.1E-06 48.6 12.6 158 4-180 5-183 (260)
382 cd01065 NAD_bind_Shikimate_DH 96.6 0.012 2.6E-07 48.1 7.9 75 4-92 18-92 (155)
383 cd05213 NAD_bind_Glutamyl_tRNA 96.6 0.019 4.2E-07 53.0 10.1 103 4-137 177-279 (311)
384 PRK14106 murD UDP-N-acetylmura 96.5 0.026 5.5E-07 54.6 11.3 117 1-134 1-117 (450)
385 TIGR01289 LPOR light-dependent 96.5 0.012 2.5E-07 54.3 8.5 120 5-133 3-144 (314)
386 PRK09599 6-phosphogluconate de 96.5 0.029 6.4E-07 51.5 10.9 64 6-89 1-67 (301)
387 KOG2305 3-hydroxyacyl-CoA dehy 96.5 0.0071 1.5E-07 52.8 6.1 161 5-190 3-193 (313)
388 PRK13302 putative L-aspartate 96.5 0.0097 2.1E-07 53.9 7.4 74 1-90 1-76 (271)
389 PRK08303 short chain dehydroge 96.4 0.041 8.8E-07 50.6 11.5 160 4-180 7-199 (305)
390 PRK07041 short chain dehydroge 96.4 0.013 2.8E-07 50.9 7.7 112 9-131 1-123 (230)
391 PRK08664 aspartate-semialdehyd 96.4 0.029 6.4E-07 52.7 10.5 34 5-44 3-36 (349)
392 PLN02712 arogenate dehydrogena 96.4 0.038 8.1E-07 56.4 11.9 65 4-89 51-116 (667)
393 PRK08690 enoyl-(acyl carrier p 96.4 0.096 2.1E-06 46.7 13.4 155 4-180 5-184 (261)
394 cd05312 NAD_bind_1_malic_enz N 96.4 0.0075 1.6E-07 54.6 6.1 119 5-144 25-156 (279)
395 TIGR01500 sepiapter_red sepiap 96.4 0.03 6.6E-07 49.6 9.9 155 7-181 2-189 (256)
396 COG1712 Predicted dinucleotide 96.3 0.03 6.4E-07 48.9 9.1 90 6-128 1-90 (255)
397 PRK05479 ketol-acid reductoiso 96.3 0.022 4.8E-07 52.9 9.1 66 4-89 16-81 (330)
398 PRK09730 putative NAD(P)-bindi 96.3 0.015 3.2E-07 50.9 7.6 25 6-30 2-26 (247)
399 PRK12859 3-ketoacyl-(acyl-carr 96.3 0.057 1.2E-06 47.9 11.5 33 4-43 5-39 (256)
400 PLN02968 Probable N-acetyl-gam 96.3 0.014 3E-07 55.5 7.6 36 4-45 37-72 (381)
401 PLN02350 phosphogluconate dehy 96.3 0.027 5.8E-07 55.3 9.7 73 4-89 5-80 (493)
402 KOG2666 UDP-glucose/GDP-mannos 96.3 0.048 1E-06 49.9 10.4 81 6-94 2-91 (481)
403 PRK06598 aspartate-semialdehyd 96.3 0.043 9.2E-07 51.8 10.5 73 6-90 2-74 (369)
404 TIGR02371 ala_DH_arch alanine 96.2 0.028 6E-07 52.3 9.2 73 4-88 127-199 (325)
405 PRK06720 hypothetical protein; 96.2 0.032 7E-07 46.8 8.7 36 3-45 14-49 (169)
406 PF03435 Saccharop_dh: Sacchar 96.2 0.0049 1.1E-07 58.5 4.0 76 8-92 1-78 (386)
407 TIGR02354 thiF_fam2 thiamine b 96.2 0.073 1.6E-06 46.0 10.8 35 4-45 20-54 (200)
408 TIGR01745 asd_gamma aspartate- 96.2 0.037 8E-07 52.2 9.5 72 6-90 1-73 (366)
409 PRK06901 aspartate-semialdehyd 96.1 0.021 4.6E-07 52.6 7.7 71 4-90 2-73 (322)
410 PRK05671 aspartate-semialdehyd 96.1 0.026 5.7E-07 52.7 8.5 75 1-90 1-75 (336)
411 PLN02383 aspartate semialdehyd 96.1 0.026 5.6E-07 52.9 8.3 73 4-90 6-78 (344)
412 PRK08040 putative semialdehyde 96.1 0.024 5.1E-07 53.0 7.8 75 2-90 1-75 (336)
413 PRK06476 pyrroline-5-carboxyla 96.1 0.021 4.6E-07 51.1 7.3 69 6-89 1-69 (258)
414 COG0345 ProC Pyrroline-5-carbo 96.1 0.069 1.5E-06 48.2 10.5 70 5-89 1-70 (266)
415 PRK09620 hypothetical protein; 96.0 0.019 4E-07 50.8 6.7 35 4-45 2-52 (229)
416 PRK14874 aspartate-semialdehyd 96.0 0.027 5.8E-07 52.6 8.0 71 6-90 2-72 (334)
417 PF03949 Malic_M: Malic enzyme 96.0 0.031 6.8E-07 50.0 8.0 119 6-144 26-157 (255)
418 COG0702 Predicted nucleoside-d 96.0 0.014 3E-07 51.9 5.9 74 6-92 1-74 (275)
419 COG3967 DltE Short-chain dehyd 96.0 0.092 2E-06 45.4 10.3 119 1-134 1-141 (245)
420 PRK15059 tartronate semialdehy 96.0 0.015 3.2E-07 53.3 5.9 63 6-89 1-63 (292)
421 PRK13304 L-aspartate dehydroge 95.9 0.072 1.6E-06 48.1 10.1 67 6-89 2-69 (265)
422 cd01487 E1_ThiF_like E1_ThiF_l 95.9 0.031 6.7E-07 47.2 7.2 33 7-46 1-33 (174)
423 PRK07574 formate dehydrogenase 95.9 0.055 1.2E-06 51.5 9.6 66 4-89 191-256 (385)
424 PLN02712 arogenate dehydrogena 95.9 0.12 2.5E-06 52.9 12.5 65 4-89 368-433 (667)
425 PRK07688 thiamine/molybdopteri 95.9 0.062 1.3E-06 50.3 9.8 35 4-45 23-57 (339)
426 PRK08291 ectoine utilization p 95.9 0.056 1.2E-06 50.3 9.5 74 4-89 131-205 (330)
427 PRK13243 glyoxylate reductase; 95.9 0.032 7E-07 52.1 7.8 64 4-89 149-212 (333)
428 PRK06718 precorrin-2 dehydroge 95.9 0.063 1.4E-06 46.5 9.1 70 3-88 8-77 (202)
429 PRK15469 ghrA bifunctional gly 95.8 0.048 1E-06 50.5 8.8 64 4-89 135-198 (312)
430 PRK06407 ornithine cyclodeamin 95.8 0.05 1.1E-06 50.1 8.9 74 4-88 116-189 (301)
431 PRK08300 acetaldehyde dehydrog 95.8 0.53 1.1E-05 43.3 15.3 37 3-46 2-39 (302)
432 TIGR01035 hemA glutamyl-tRNA r 95.8 0.038 8.3E-07 53.2 8.2 73 4-92 179-251 (417)
433 PF02423 OCD_Mu_crystall: Orni 95.8 0.055 1.2E-06 50.0 8.9 72 4-88 127-199 (313)
434 PRK08618 ornithine cyclodeamin 95.8 0.055 1.2E-06 50.3 8.8 74 4-89 126-200 (325)
435 TIGR00873 gnd 6-phosphoglucona 95.7 0.039 8.5E-07 53.9 8.1 97 7-133 1-100 (467)
436 COG0677 WecC UDP-N-acetyl-D-ma 95.7 0.085 1.8E-06 49.8 9.8 78 5-93 9-96 (436)
437 PRK08605 D-lactate dehydrogena 95.7 0.037 7.9E-07 51.7 7.5 63 5-89 146-208 (332)
438 PRK07340 ornithine cyclodeamin 95.7 0.044 9.5E-07 50.5 7.9 72 4-89 124-196 (304)
439 PRK07589 ornithine cyclodeamin 95.7 0.061 1.3E-06 50.5 8.9 74 4-89 128-201 (346)
440 TIGR01724 hmd_rel H2-forming N 95.7 0.19 4.1E-06 46.5 11.7 68 6-89 1-89 (341)
441 PRK06141 ornithine cyclodeamin 95.7 0.067 1.5E-06 49.5 9.1 72 4-88 124-196 (314)
442 PRK14806 bifunctional cyclohex 95.7 0.12 2.7E-06 53.3 11.9 68 6-89 4-71 (735)
443 TIGR02356 adenyl_thiF thiazole 95.7 0.057 1.2E-06 46.7 8.0 35 4-45 20-54 (202)
444 TIGR01692 HIBADH 3-hydroxyisob 95.7 0.06 1.3E-06 49.0 8.6 60 10-89 1-60 (288)
445 PRK12475 thiamine/molybdopteri 95.6 0.048 1E-06 51.0 8.0 36 4-46 23-58 (338)
446 PRK05476 S-adenosyl-L-homocyst 95.6 0.089 1.9E-06 50.7 9.9 66 4-90 211-276 (425)
447 COG0136 Asd Aspartate-semialde 95.6 0.064 1.4E-06 49.7 8.6 71 5-90 1-75 (334)
448 TIGR01850 argC N-acetyl-gamma- 95.6 0.11 2.3E-06 48.9 10.2 34 6-45 1-35 (346)
449 cd00401 AdoHcyase S-adenosyl-L 95.6 0.098 2.1E-06 50.2 10.0 66 4-90 201-266 (413)
450 COG3320 Putative dehydrogenase 95.6 0.11 2.5E-06 48.7 10.0 170 6-186 1-199 (382)
451 TIGR02992 ectoine_eutC ectoine 95.5 0.079 1.7E-06 49.3 9.1 74 4-89 128-202 (326)
452 PRK06823 ornithine cyclodeamin 95.5 0.086 1.9E-06 48.8 9.2 73 4-88 127-199 (315)
453 cd00762 NAD_bind_malic_enz NAD 95.5 0.033 7.2E-07 49.7 6.1 120 5-144 25-157 (254)
454 KOG1208 Dehydrogenases with di 95.5 0.46 9.9E-06 44.0 13.9 164 4-181 34-221 (314)
455 PLN03139 formate dehydrogenase 95.5 0.095 2.1E-06 49.9 9.5 66 4-89 198-263 (386)
456 cd01483 E1_enzyme_family Super 95.5 0.26 5.6E-06 39.8 10.9 32 7-45 1-32 (143)
457 PRK00048 dihydrodipicolinate r 95.5 0.05 1.1E-06 48.9 7.2 67 5-89 1-68 (257)
458 PF02826 2-Hacid_dh_C: D-isome 95.5 0.041 8.9E-07 46.5 6.3 66 4-90 35-100 (178)
459 TIGR00936 ahcY adenosylhomocys 95.5 0.12 2.6E-06 49.5 10.0 66 4-90 194-259 (406)
460 PRK08644 thiamine biosynthesis 95.4 0.17 3.7E-06 44.1 10.3 35 4-45 27-61 (212)
461 cd05311 NAD_bind_2_malic_enz N 95.4 0.21 4.6E-06 44.0 11.0 78 4-90 24-106 (226)
462 PRK08818 prephenate dehydrogen 95.4 0.18 4E-06 47.7 10.9 56 5-89 4-59 (370)
463 KOG2733 Uncharacterized membra 95.3 0.12 2.5E-06 48.2 9.0 92 1-97 1-99 (423)
464 PRK13301 putative L-aspartate 95.3 0.19 4.1E-06 45.3 10.2 84 5-122 2-87 (267)
465 cd01075 NAD_bind_Leu_Phe_Val_D 95.3 0.097 2.1E-06 45.2 8.2 35 4-46 27-61 (200)
466 PRK06199 ornithine cyclodeamin 95.3 0.11 2.3E-06 49.5 9.1 76 4-88 154-230 (379)
467 TIGR00465 ilvC ketol-acid redu 95.2 0.055 1.2E-06 50.1 6.8 65 5-89 3-67 (314)
468 PF02882 THF_DHG_CYH_C: Tetrah 95.2 0.1 2.2E-06 43.5 7.6 57 4-93 35-91 (160)
469 PRK00436 argC N-acetyl-gamma-g 95.1 0.066 1.4E-06 50.2 7.1 23 6-28 3-25 (343)
470 PRK12557 H(2)-dependent methyl 95.1 0.23 5.1E-06 46.5 10.6 57 18-88 32-88 (342)
471 PLN00015 protochlorophyllide r 95.1 0.49 1.1E-05 43.3 12.7 116 9-133 1-138 (308)
472 PF00670 AdoHcyase_NAD: S-aden 95.0 0.1 2.2E-06 43.5 7.2 66 5-91 23-88 (162)
473 PRK00258 aroE shikimate 5-dehy 95.0 0.18 3.9E-06 45.7 9.4 74 4-91 122-195 (278)
474 TIGR01296 asd_B aspartate-semi 95.0 0.064 1.4E-06 50.2 6.6 71 7-91 1-71 (339)
475 PLN02730 enoyl-[acyl-carrier-p 94.9 1.8 3.8E-05 39.9 15.9 33 2-41 6-40 (303)
476 COG1028 FabG Dehydrogenases wi 94.9 0.38 8.2E-06 42.1 11.1 30 1-30 1-30 (251)
477 KOG1201 Hydroxysteroid 17-beta 94.9 0.27 5.8E-06 44.8 10.0 117 5-132 38-173 (300)
478 PLN02494 adenosylhomocysteinas 94.9 0.2 4.2E-06 48.8 9.6 90 5-133 254-343 (477)
479 PRK14194 bifunctional 5,10-met 94.8 0.1 2.3E-06 47.8 7.4 56 4-92 158-213 (301)
480 KOG4039 Serine/threonine kinas 94.8 0.099 2.1E-06 44.2 6.5 102 3-122 16-123 (238)
481 KOG4777 Aspartate-semialdehyde 94.8 0.046 9.9E-07 48.6 4.7 79 6-90 4-86 (361)
482 PRK05690 molybdopterin biosynt 94.8 0.27 5.9E-06 43.8 9.8 35 4-45 31-65 (245)
483 cd05212 NAD_bind_m-THF_DH_Cycl 94.8 0.16 3.4E-06 41.4 7.5 56 4-92 27-82 (140)
484 KOG1221 Acyl-CoA reductase [Li 94.7 0.13 2.9E-06 49.8 8.1 123 5-135 12-157 (467)
485 PRK15438 erythronate-4-phospha 94.7 0.16 3.4E-06 48.3 8.5 61 4-89 115-175 (378)
486 PLN02928 oxidoreductase family 94.7 0.12 2.7E-06 48.5 7.8 75 5-89 159-234 (347)
487 COG0002 ArgC Acetylglutamate s 94.7 0.089 1.9E-06 48.9 6.6 35 5-45 2-36 (349)
488 PRK13581 D-3-phosphoglycerate 94.7 0.22 4.7E-06 49.5 9.7 64 4-89 139-202 (526)
489 PRK05579 bifunctional phosphop 94.7 0.07 1.5E-06 51.1 6.0 76 4-93 187-279 (399)
490 PLN02858 fructose-bisphosphate 94.6 0.25 5.3E-06 54.5 10.7 97 1-132 319-419 (1378)
491 cd01079 NAD_bind_m-THF_DH NAD 94.6 0.13 2.7E-06 44.2 6.8 78 4-93 61-138 (197)
492 PRK00257 erythronate-4-phospha 94.6 0.18 3.9E-06 48.0 8.5 61 4-89 115-175 (381)
493 KOG2774 NAD dependent epimeras 94.6 0.16 3.4E-06 44.8 7.5 161 4-184 43-214 (366)
494 PLN03129 NADP-dependent malic 94.5 0.085 1.8E-06 52.4 6.4 136 5-161 321-467 (581)
495 cd01080 NAD_bind_m-THF_DH_Cycl 94.5 0.15 3.2E-06 42.9 7.0 55 4-92 43-98 (168)
496 PRK06046 alanine dehydrogenase 94.5 0.21 4.6E-06 46.4 8.8 73 4-88 128-200 (326)
497 TIGR00507 aroE shikimate 5-deh 94.5 0.24 5.2E-06 44.7 8.9 72 5-91 117-188 (270)
498 cd01485 E1-1_like Ubiquitin ac 94.5 0.47 1E-05 40.8 10.3 34 5-45 19-52 (198)
499 TIGR02853 spore_dpaA dipicolin 94.5 0.082 1.8E-06 48.3 5.8 67 5-89 151-217 (287)
500 TIGR01327 PGDH D-3-phosphoglyc 94.4 0.19 4E-06 50.0 8.7 64 5-89 138-201 (525)
No 1
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.4e-69 Score=458.15 Aligned_cols=289 Identities=70% Similarity=1.081 Sum_probs=279.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
+++.+|+|+||+|+||+++++.+..+-+||++||+.++|+|+.+..+.|+|..|+|+||++|++..+..+++..++|+|.
T Consensus 2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvattd~~~afkdv 81 (332)
T KOG1496|consen 2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATTDEVEAFKDV 81 (332)
T ss_pred CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhhccC
Confidence 45689999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhhHH
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~ 162 (300)
|+.|+.+++||++||+|.|++..|++|++..++++++|++|+++++|++||++.++.++.+++|++|.+||.++|+||.+
T Consensus 82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRLDhN 161 (332)
T KOG1496|consen 82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRLDHN 161 (332)
T ss_pred cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhhCCCCchhcchhhhhhchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCcc
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t 242 (300)
|+..++|.++|+..++|++++|||||+.+|||+..+|+|....+-+|+.|.++|+.|++.+|.+.||+||..||+.++.|
T Consensus 162 RA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ark~S 241 (332)
T KOG1496|consen 162 RALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKARKLS 241 (332)
T ss_pred hHHHHHHHhhCCchhhcceeEEecccccccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhhhhhh
Confidence 99999999999999999999999999999999999999976656799999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhhhhccCCCc----------cccCCCCCeEEEEeEEE-CCeeeeeee
Q 022227 243 SALSAASSACDHIRDWVLGTPEV----------GSLLIFTPMIYTELVSW-LEPWTAIVG 291 (300)
Q Consensus 243 ~~~s~a~ai~~~~~~~~~~t~~~----------g~ygi~~~v~~s~Pv~~-~~~~~~~~~ 291 (300)
|++|+|.|+|+|+++|+.||+++ |.||+|+|+.|||||.+ ++.|+.||+
T Consensus 242 SA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~k~g~wkiVqg 301 (332)
T KOG1496|consen 242 SAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTIKNGDWKIVQG 301 (332)
T ss_pred hhhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEecCCceEEEcC
Confidence 99999999999999999999875 89999999999999999 999999986
No 2
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=2.2e-66 Score=484.42 Aligned_cols=282 Identities=42% Similarity=0.610 Sum_probs=256.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
.+|.||+||||+|+||+++++.|+.++++++++++.|+|+|++.++++++|+++||+|+++++..++.++++.+++++||
T Consensus 42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~kda 121 (387)
T TIGR01757 42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVFEDA 121 (387)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHhCCC
Confidence 35789999997799999999999999999988888999997766779999999999999877656677777889999999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehhhH
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDH 161 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~ld~ 161 (300)
|+||++||.||++|++|.|++..|+++++++++.|+++++|++++|++|||+|+||+++++. +++|+++ |+++|.||+
T Consensus 122 DIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~-sg~~~~rviG~gT~LDs 200 (387)
T TIGR01757 122 DWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKN-APNIPRKNFHALTRLDE 200 (387)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHH-cCCCcccEEEecchhHH
Confidence 99999999999999999999999999999999999998866899999999999999999998 5665555 789999999
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCc
Q 022227 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKL 241 (300)
Q Consensus 162 ~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~ 241 (300)
+|++++||+++++++++|+...||||||++|||+||+++| +|+|+.+++++++|..++|.++++++|++|++.||+
T Consensus 201 aR~r~~LA~~l~v~~~~V~~~~V~GeHGds~vp~~S~a~V----~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~~KG~ 276 (387)
T TIGR01757 201 NRAKCQLALKSGKFYTSVSNVTIWGNHSTTQVPDFVNAKI----GGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKKWGR 276 (387)
T ss_pred HHHHHHHHHHHCcChhHcceeEEEecCCCcEEecceeeEE----CCEEhHHhcccccchHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999997555699999999999999999 999999998776787789999999999999999998
Q ss_pred cccchHHHHHHHHHhhhhccCCC----------ccc-cCCCCCeEEEEeEEE--CCeeeee
Q 022227 242 SSALSAASSACDHIRDWVLGTPE----------VGS-LLIFTPMIYTELVSW--LEPWTAI 289 (300)
Q Consensus 242 t~~~s~a~ai~~~~~~~~~~t~~----------~g~-ygi~~~v~~s~Pv~~--~~~~~~~ 289 (300)
|+++++|.++++++++|++|+.. +|+ ||+|+|++||+||++ ++.|.++
T Consensus 277 t~~~s~a~ai~~~i~ai~~g~d~~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv 337 (387)
T TIGR01757 277 SSAASTAVSIADAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELA 337 (387)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEEC
Confidence 88889999999999999865543 386 999999999999999 4899986
No 3
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=2.5e-66 Score=477.54 Aligned_cols=284 Identities=56% Similarity=0.849 Sum_probs=256.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
++|+||+||||+|+||+++++.|+.+++++.+.+.+++|+|+++++++++|+++||+|+.++...++.++++.+++++||
T Consensus 2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~da 81 (326)
T PRK05442 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDA 81 (326)
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCC
Confidence 35679999997799999999999999998766677999999987667899999999999866555667778889999999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhhHH
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~ 162 (300)
|+||++||.++++|++|.|++..|+++++++++.|+++++|++++|++|||+|++|++++++++++|++||.|.|.||++
T Consensus 82 DiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs~ 161 (326)
T PRK05442 82 DVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRLDHN 161 (326)
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEeeeHHHHH
Confidence 99999999999999999999999999999999999999866899999999999999999999559999997666999999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCcc
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t 242 (300)
|+++++|+++++++++|++++||||||++|||+||+++| +|+|+.+++.+++|..++|.++++++|++|+++||+|
T Consensus 162 R~r~~la~~l~v~~~~V~~~vV~GeHG~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t 237 (326)
T PRK05442 162 RALSQLAAKAGVPVADIKKMTVWGNHSATQYPDFRHATI----DGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEARGAS 237 (326)
T ss_pred HHHHHHHHHhCcChHHeEEeEEEECCcCceeeccccCEE----CCEEHHHHccchhhHHHHHHHHHHhhHHHHHhCcCCc
Confidence 999999999999999999988899999999999999999 9999999987767767899999999999999999999
Q ss_pred ccchHHHHHHHHHhhhhccC----------CCccccCCCCCeEEEEeEEE-CCeeeeee
Q 022227 243 SALSAASSACDHIRDWVLGT----------PEVGSLLIFTPMIYTELVSW-LEPWTAIV 290 (300)
Q Consensus 243 ~~~s~a~ai~~~~~~~~~~t----------~~~g~ygi~~~v~~s~Pv~~-~~~~~~~~ 290 (300)
++.+++.++++++++|+.++ ..+|+||+|+|++||+||++ ++.|.+|.
T Consensus 238 ~~~~a~~~~~~iv~ail~~~~~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig~Gv~~iv~ 296 (326)
T PRK05442 238 SAASAANAAIDHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQ 296 (326)
T ss_pred cHHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCccCCcCCeEEEEEEEEcCcEEEEeC
Confidence 98555544799999988763 23499999999999999999 58998865
No 4
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=6e-66 Score=474.54 Aligned_cols=284 Identities=60% Similarity=0.895 Sum_probs=258.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
++|.||+||||+|+||+++++.|+.+++++.+.+.+++|+|++++.++++|+++||+|++.+...++.++++.+++++||
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da 80 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDV 80 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCC
Confidence 46899999997799999999999999988766677999999986667799999999999866555566777889999999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhhHH
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~ 162 (300)
|+||++||.+|++|++|.|++..|+++++++++.|++++||++++|++|||+|+||+++++.++++|++|+.|+|.||++
T Consensus 81 DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs~ 160 (323)
T TIGR01759 81 DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRLDHN 160 (323)
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEeeHHHHH
Confidence 99999999999999999999999999999999999999986899999999999999999999449999997667999999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCcc
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t 242 (300)
|+++++|+++|++|++|+.++||||||++|+|+||+++| +|+|+.+++++++|+.++|.++++++|++|+++||+|
T Consensus 161 R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t 236 (323)
T TIGR01759 161 RAKYQLAAKAGVPVSDVKNVIIWGNHSNTQVPDFTHATV----DGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEARGAS 236 (323)
T ss_pred HHHHHHHHHhCcChHHeEEeEEEecCCCceeeccccCEE----CCccHHHHhcchhhHHHHHHHHHHhhHHHHHhccCCc
Confidence 999999999999999998777799999999999999999 9999999987765767899999999999999999999
Q ss_pred ccchHHHHHHHHHhhhhccC----------CCcc-ccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 243 SALSAASSACDHIRDWVLGT----------PEVG-SLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 243 ~~~s~a~ai~~~~~~~~~~t----------~~~g-~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
++.++|.++++++++|+.+. +.+| +||+|+|+|||+||++ ++.|.++.
T Consensus 237 ~~~~~a~a~~~iv~ail~~~~~~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~ 297 (323)
T TIGR01759 237 SAASAANAAIDHVRDWVTGTPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVE 297 (323)
T ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcC
Confidence 88778899999999988764 3348 9999999999999999 48999887
No 5
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=1e-64 Score=479.56 Aligned_cols=279 Identities=38% Similarity=0.545 Sum_probs=253.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCe--EEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPV--ILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~--~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (300)
++.||+||||+|+||+++++.|+.+++|++++++ +|+|+|++ +++++|+++||+|+.+++..++.++++.|++++|
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~--~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kd 176 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERS--KQALEGVAMELEDSLYPLLREVSIGIDPYEVFQD 176 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCC--cchhHHHHHHHHHhhhhhcCceEEecCCHHHhCc
Confidence 5789999997799999999999999888877766 78888886 5889999999999987766677777888999999
Q ss_pred CcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhh-hcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehh
Q 022227 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ-HAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRL 159 (300)
Q Consensus 82 aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~l 159 (300)
||+||++||.||++||+|.|++..|++|++++++.|++ ++| ++++|++|||+|+||+++++. +++|+++ |+++|.|
T Consensus 177 aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p-~~ivIVVsNPvDv~t~v~~k~-sg~~~~rViGtgT~L 254 (444)
T PLN00112 177 AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASR-NVKVIVVGNPCNTNALICLKN-APNIPAKNFHALTRL 254 (444)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEcCCcHHHHHHHHHHH-cCCCCcceEEeeccH
Confidence 99999999999999999999999999999999999999 465 799999999999999999999 5665554 8999999
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcC
Q 022227 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR 239 (300)
Q Consensus 160 d~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k 239 (300)
|++|++++||+++|+++++|+++.||||||++|||+||+++| +|+|+.+++++++|+.++|.++++++|++|++.|
T Consensus 255 DsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~wS~a~V----~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~~k 330 (444)
T PLN00112 255 DENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKI----NGLPVKEVITDHKWLEEEFTPKVQKRGGVLIKKW 330 (444)
T ss_pred HHHHHHHHHHHHhCcCHHHcccceEEecCCCceeeccceeEE----CCccHHHhhccccchHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999997765799999999999999999 9999999998777888899999999999999999
Q ss_pred CccccchHHHHHHHHHhhhhccCC----------Ccc-ccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 240 KLSSALSAASSACDHIRDWVLGTP----------EVG-SLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 240 g~t~~~s~a~ai~~~~~~~~~~t~----------~~g-~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
|+|+++++|.++++++++|++|+. .+| +||+++|++||+||++ ++.|.+++
T Consensus 331 G~t~~~s~a~ai~~~I~ail~~~d~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~ 394 (444)
T PLN00112 331 GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVK 394 (444)
T ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECC
Confidence 988888999999999999885543 348 6999999999999999 58999884
No 6
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.6e-64 Score=476.58 Aligned_cols=284 Identities=32% Similarity=0.574 Sum_probs=256.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+|.+|+||||+|++|+++++.|+.+.+||+++++.|+|+|+++++++++|++|||+|+++++..++.++++.+++|+|||
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~daD 201 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDAH 201 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCCC
Confidence 56899999999999999999999999999999999999999767789999999999999887767788888999999999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCe-EEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhhHH
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNC-KVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~-~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~ 162 (300)
+||++||.||++|++|.|++..|++|+++++++|++++|++. ++|++|||+|++|+++++++|++|++||.+++.+|++
T Consensus 202 vvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~gtlds~ 281 (452)
T cd05295 202 VIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVARLQEN 281 (452)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEecchHHH
Confidence 999999999999999999999999999999999999998554 5566679999999999999779999998888779999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCC--------CcchhhhhcccccchhHHHHHHHhHHHH
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG--------EKPVRELVKDDAWLNGEFITTVQQRGAA 234 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~--------g~p~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (300)
|++++||+++|+++++|++++||||||++|||+||+++|..||+ |+|+.+++.+++|..+++.+.++++++
T Consensus 282 R~r~~LA~kl~V~~~~V~~~~VwGeHG~sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~~~v~~rg~- 360 (452)
T cd05295 282 RAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFVATLKSLSS- 360 (452)
T ss_pred HHHHHHHHHhCcCHHHceeeEEEEccCCceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHHHHHHHHHHH-
Confidence 99999999999999999887789999999999999999933221 299999987778888899999999999
Q ss_pred HHhcCCccccchHHHHHHHHHhhhhccCCC----------ccccCCCCCeEEEEeEEE-CCeeeeeee
Q 022227 235 IIKARKLSSALSAASSACDHIRDWVLGTPE----------VGSLLIFTPMIYTELVSW-LEPWTAIVG 291 (300)
Q Consensus 235 i~~~kg~t~~~s~a~ai~~~~~~~~~~t~~----------~g~ygi~~~v~~s~Pv~~-~~~~~~~~~ 291 (300)
++|| ++++|+|.|+++++++|+.+++. +|+||+|+|++|||||++ ++-|..|++
T Consensus 361 --~rkg-sT~~siA~A~~~iv~ail~~t~~~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~ 425 (452)
T cd05295 361 --SLNH-EAAISPAHAIATTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTD 425 (452)
T ss_pred --hccC-ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeC
Confidence 4555 56679999999999999988742 399999999999999999 588998864
No 7
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=4.8e-64 Score=454.06 Aligned_cols=270 Identities=30% Similarity=0.377 Sum_probs=245.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeC-ChhhhcCCCcE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~-~~~~a~~~aDv 84 (300)
+||+|||| |+||+++++.|+..++.. |++|+|++ +++++|.++||.|+.++......++. +.+++|+|||+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~-----el~LiDi~--~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDi 72 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGS-----ELVLIDIN--EEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADI 72 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccc-----eEEEEEcc--cccccchhcchhhcchhccCceEEecCCChhhhcCCCE
Confidence 59999995 999999999997766533 89999998 57899999999999977655555554 45899999999
Q ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehhhHHH
Q 022227 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNR 163 (300)
Q Consensus 85 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~ld~~R 163 (300)
|+++||.||||||+|.||+..|++|++++++++.+++| +++++|+|||+|++||++++. +++|+++ |+++|.||++|
T Consensus 73 VvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~-d~ivlVvtNPvD~~ty~~~k~-sg~p~~rvig~gt~LDsaR 150 (313)
T COG0039 73 VVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAP-DAIVLVVTNPVDILTYIAMKF-SGFPKNRVIGSGTVLDSAR 150 (313)
T ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCC-CeEEEEecCcHHHHHHHHHHh-cCCCccceecccchHHHHH
Confidence 99999999999999999999999999999999999998 789999999999999999998 7899888 78899999999
Q ss_pred HHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhc-ccccchhHHHHHHHhHHHHHHhcCCcc
Q 022227 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK-DDAWLNGEFITTVQQRGAAIIKARKLS 242 (300)
Q Consensus 164 ~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~-~~~~~~~~~~~~v~~~~~~i~~~kg~t 242 (300)
|+++||+++|+++++|+.++ +||||++|||+||+++| +|+|+.++++ +++|..+++.++||++|++|+++||++
T Consensus 151 ~~~~lae~~~v~~~~V~~~V-iGeHGdt~vp~~S~a~v----~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~~ 225 (313)
T COG0039 151 FRTFLAEKLGVSPKDVHAYV-IGEHGDTMVPLWSQATV----GGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGAG 225 (313)
T ss_pred HHHHHHHHhCCChhHceeeE-eccCCCceEEeeeeeeE----CCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHccCcc
Confidence 99999999999999999996 78999999999999999 9999999998 567778899999999999999999875
Q ss_pred ccchHHHHHHHHHhhhhccC--------CCccccCCCCCeEEEEeEEE--CCeeeeeee
Q 022227 243 SALSAASSACDHIRDWVLGT--------PEVGSLLIFTPMIYTELVSW--LEPWTAIVG 291 (300)
Q Consensus 243 ~~~s~a~ai~~~~~~~~~~t--------~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~~ 291 (300)
+++++|.|+++++++|+.++ +.+|+|| ++|+|||+||++ +++|.++.-
T Consensus 226 t~~~~A~a~a~~~~ail~d~~~vl~~s~~l~G~yg-~~dv~~gvP~~lg~~Gv~~iie~ 283 (313)
T COG0039 226 TYYGPAAALARMVEAILRDEKRVLPVSVYLDGEYG-VEDVYFGVPAVLGKNGVEEILEL 283 (313)
T ss_pred chhhHHHHHHHHHHHHHcCCCceEEEEEeecCccC-cCCeEEEeeEEEcCCCcEEEecC
Confidence 67799999999999988654 4569999 679999999999 699988864
No 8
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=9e-63 Score=453.89 Aligned_cols=284 Identities=55% Similarity=0.826 Sum_probs=256.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+|+||+||||+|+||+++++.|+.+++++.+++.+|+|+|++++.++++|+++||+|+.+++..+++++++.+++++|||
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 80 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD 80 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence 47899999977999999999999999988667789999999876778999999999998665556677778899999999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhhHHH
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR 163 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~R 163 (300)
+||++||.|+++|++|.|++..|+++++++++.|++++||++++|++|||+|+||+++++.++++|++++++.|.||++|
T Consensus 81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~R 160 (322)
T cd01338 81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNR 160 (322)
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHH
Confidence 99999999999999999999999999999999999999658999999999999999999984369999987779999999
Q ss_pred HHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCccc
Q 022227 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243 (300)
Q Consensus 164 ~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t~ 243 (300)
+++.+|+++|+++++|++++||||||++++|+||++++ +|+|+.+++.+.+|..++|.++++++|++|+++||+|+
T Consensus 161 l~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t~ 236 (322)
T cd01338 161 AKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTNATI----GGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKARGASS 236 (322)
T ss_pred HHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhhcEE----CCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhCcCCcc
Confidence 99999999999999999988899999999999999999 99999988877667678999999999999999999998
Q ss_pred cchHHHHHHHHHhhhhccCC----------CccccCCCCCeEEEEeEEEC-Ceeeeeee
Q 022227 244 ALSAASSACDHIRDWVLGTP----------EVGSLLIFTPMIYTELVSWL-EPWTAIVG 291 (300)
Q Consensus 244 ~~s~a~ai~~~~~~~~~~t~----------~~g~ygi~~~v~~s~Pv~~~-~~~~~~~~ 291 (300)
+.+++.++++++++|+.+.. .+|+||+|+|++||+||+++ +-|..|.+
T Consensus 237 ~~~~a~a~~~iv~ail~~~~~~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~ 295 (322)
T cd01338 237 AASAANAAIDHMRDWVLGTPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEG 295 (322)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeC
Confidence 85444799999999887663 34999999999999999995 66777654
No 9
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.2e-62 Score=450.42 Aligned_cols=281 Identities=56% Similarity=0.861 Sum_probs=251.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
.||+||||+|+||+++++.|+.+++++++.+.+++|+|++++.++++++++||.|+.++....++++++.+++++|||+|
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiV 80 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVA 80 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEE
Confidence 48999998899999999999999998865666899999975447889999999999866655566777889999999999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCC-CCCCcEEeeehhhHHHH
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS-IPAKNITCLTRLDHNRA 164 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~-~p~~~i~~~t~ld~~R~ 164 (300)
|++||.|+++|++|.|++..|+++++++++.|++++.|++++|++|||+|+||+++++. ++ +|++||.++|.||++|+
T Consensus 81 VitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~-sg~~p~~~vig~t~LDs~R~ 159 (323)
T cd00704 81 ILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALKN-APNLPPKNFTALTRLDHNRA 159 (323)
T ss_pred EEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHH-cCCCCHHHEEEeeHHHHHHH
Confidence 99999999999999999999999999999999999733789999999999999999999 67 69999767799999999
Q ss_pred HHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhh---cccccchhHHHHHHHhHHHHHHhcCCc
Q 022227 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV---KDDAWLNGEFITTVQQRGAAIIKARKL 241 (300)
Q Consensus 165 ~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~---~~~~~~~~~~~~~v~~~~~~i~~~kg~ 241 (300)
|+++|++++++|++|++++||||||++|+|+||+++| +|+|+.++. .+++|..++|.++++++|++|+++||+
T Consensus 160 r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~kg~ 235 (323)
T cd00704 160 KAQVARKLGVRVSDVKNVIIWGNHSNTQVPDLSNAVV----YGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKKRGA 235 (323)
T ss_pred HHHHHHHhCcCHHHceeeeEEecccCceeecccccee----cCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhccCc
Confidence 9999999999999998777899999999999999999 999998875 344676789999999999999999999
Q ss_pred cccchHHHHHHHHHhhhhccCC----------Ccccc-CCCCCeEEEEeEEEC-Ceeeeeee
Q 022227 242 SSALSAASSACDHIRDWVLGTP----------EVGSL-LIFTPMIYTELVSWL-EPWTAIVG 291 (300)
Q Consensus 242 t~~~s~a~ai~~~~~~~~~~t~----------~~g~y-gi~~~v~~s~Pv~~~-~~~~~~~~ 291 (300)
|++.++|.|+++++++|+.+.. .+|+| |+|+|++||+||+++ +-|..|..
T Consensus 236 t~~~~~a~a~~~iv~ail~~~~~~~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~ 297 (323)
T cd00704 236 SSAASAAKAIADHVKDWLFGTPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVED 297 (323)
T ss_pred chhHHHHHHHHHHHHHHHhCCCCCcEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecC
Confidence 9986789999999999987655 34899 999999999999995 67776643
No 10
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.8e-61 Score=444.17 Aligned_cols=287 Identities=65% Similarity=0.983 Sum_probs=253.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+|.||+||||+|+||+++++.|+.+++++++...+++|+|++++.++++++++|+.|++.+...++..+.+++++++|||
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCC
Confidence 47899999988999999999999988875444458999999765567889999999988665556766777789999999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhhHHH
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR 163 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~R 163 (300)
+|||+||.+++++++|.+++..|+++++++++.|+++++|++++|++|||+|+||+++++..+++|+++|+++|.||++|
T Consensus 81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R 160 (325)
T cd01336 81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNR 160 (325)
T ss_pred EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHH
Confidence 99999999999999999999999999999999999998668999999999999999999996688888899999999999
Q ss_pred HHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCccc
Q 022227 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243 (300)
Q Consensus 164 ~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t~ 243 (300)
+++++|+++++++++|++++||||||++|||+||+++|..|.-|+|+.+++++++|..++|.++++++|++|+++|+.++
T Consensus 161 ~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~~~g~t 240 (325)
T cd01336 161 AKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAVIKARKLSS 240 (325)
T ss_pred HHHHHHHHhCcChhhceEeEEEEcCCCCeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHHHHHccccch
Confidence 99999999999999999887899999999999999999222229999999877667778999999999999999866566
Q ss_pred cchHHHHHHHHHhhhhccC----------CCccccCCCCCeEEEEeEEEC-Ceeeeee
Q 022227 244 ALSAASSACDHIRDWVLGT----------PEVGSLLIFTPMIYTELVSWL-EPWTAIV 290 (300)
Q Consensus 244 ~~s~a~ai~~~~~~~~~~t----------~~~g~ygi~~~v~~s~Pv~~~-~~~~~~~ 290 (300)
++++|.++++++++|+.++ ..+|+||+|+|++||+||+++ +-|..|.
T Consensus 241 ~~~~a~~~~~i~~ail~~~~~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~ 298 (325)
T cd01336 241 AMSAAKAICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQ 298 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEec
Confidence 6799999999999988764 234999999999999999995 5677764
No 11
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=2.7e-61 Score=444.45 Aligned_cols=280 Identities=66% Similarity=1.022 Sum_probs=247.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEE
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi 86 (300)
||+||||+|+||+++++.|+.+++++.+.+.+++|+|++++.++++++++||.|++.++...+..+++.+++++|||+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 68999977999999999999999886444557999999876667999999999998665555655557789999999999
Q ss_pred EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhhHHHHHH
Q 022227 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166 (300)
Q Consensus 87 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~R~~~ 166 (300)
++||.|++++++|.+++..|+++++++++.|+++++|++++|++|||+|+||+++++++.++|+++|+++|.||++|+++
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~LDs~R~r~ 160 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRALA 160 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeehHHHHHHH
Confidence 99999999999999999999999999999999997347999999999999999999995456666689999999999999
Q ss_pred HHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCC-C---cchhhhhcccccchhHHHHHHHhHHHHHHhcCCcc
Q 022227 167 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG-E---KPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (300)
Q Consensus 167 ~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~-g---~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t 242 (300)
++|+++|+++++|++++||||||++|||+||+++| + | +|+.+++++++|+.++|.++++++|++|+++||.+
T Consensus 161 ~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~~ 236 (324)
T TIGR01758 161 QVAERAGVPVSDVKNVIIWGNHSSTQYPDVNHATV----TKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRARKLS 236 (324)
T ss_pred HHHHHhCCChhhceEeEEEECCCCCccccccccee----cCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhccCCC
Confidence 99999999999998766799999999999999999 8 9 99999987755767899999999999999988866
Q ss_pred ccchHHHHHHHHHhhhhcc----------CCCccc-cCCCCCeEEEEeEEE-CCeeeeee
Q 022227 243 SALSAASSACDHIRDWVLG----------TPEVGS-LLIFTPMIYTELVSW-LEPWTAIV 290 (300)
Q Consensus 243 ~~~s~a~ai~~~~~~~~~~----------t~~~g~-ygi~~~v~~s~Pv~~-~~~~~~~~ 290 (300)
+++++|.++++++++|++| +..+|+ ||+|+|++||+||++ ++.|..|.
T Consensus 237 t~~~ia~~~~~i~~ai~~~~~~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~ 296 (324)
T TIGR01758 237 SALSAAKAAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVE 296 (324)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEec
Confidence 7779999999999998743 234599 999999999999999 58888775
No 12
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.4e-60 Score=433.40 Aligned_cols=267 Identities=18% Similarity=0.254 Sum_probs=235.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChhhhcCCCcEE
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~~a~~~aDvV 85 (300)
||+||| +|+||+++++.|+.+++++ |++|+|++ +++++|+++||+|+.... ..+++++++.+++++|||+|
T Consensus 1 Ki~IIG-aG~VG~~~a~~l~~~~~~~-----elvL~Di~--~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIG-AGHVGSAVLNYALALGLFS-----EIVLIDVN--EGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADII 72 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCC--cchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEE
Confidence 799999 6999999999999998876 89999996 478999999999976433 23455555678999999999
Q ss_pred EEeCCCCCCCCCc--HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehhhHH
Q 022227 86 VMVGGFPRKEGME--RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (300)
Q Consensus 86 i~~ag~~~~~g~~--r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~ld~~ 162 (300)
|++||.||+||++ |.|++..|+++++++++.+++++| ++++|++|||+|+||+++++. +++|+++ |+.+|.||++
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p-~~i~ivvsNPvDv~t~~~~k~-sg~p~~rviG~gt~LDs~ 150 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTK-EAVIILITNPLDIAVYIAATE-FDYPANKVIGTGTMLDTA 150 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEecCcHHHHHHHHHHH-hCcChhheecccchHHHH
Confidence 9999999999999 699999999999999999999997 789999999999999999998 7999988 5778999999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcc---cccchhHHHHHHHhHHHHHHhcC
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD---DAWLNGEFITTVQQRGAAIIKAR 239 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~---~~~~~~~~~~~v~~~~~~i~~~k 239 (300)
|+++++|+++|+++++|+++ ||||||++|+|+||+++| +|+|+.+++.. +.|..+++.++++++|++|+++|
T Consensus 151 R~~~~la~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~v----~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~K 225 (307)
T cd05290 151 RLRRIVADKYGVDPKNVTGY-VLGEHGSHAFPVWSLVNI----AGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRK 225 (307)
T ss_pred HHHHHHHHHhCCCcccEEEE-EEecCCCceEEeeeeeEE----CCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999 599999999999999999 99999998742 23446789999999999999999
Q ss_pred CccccchHHHHHHHHHhhhhc--------cCCCccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 240 KLSSALSAASSACDHIRDWVL--------GTPEVGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 240 g~t~~~s~a~ai~~~~~~~~~--------~t~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
|.|+| ++|.++++++++|+. +++..|+|| ++|+|||+||++ ++++..+.
T Consensus 226 G~t~~-~ia~a~~~ii~ail~d~~~v~~vsv~~~G~yg-~~~v~~svP~~ig~~Gv~~i~~ 284 (307)
T cd05290 226 GWTNA-GIAKSASRLIKAILLDERSILPVCTLLSGEYG-LSDVALSLPTVIGAKGIERVLE 284 (307)
T ss_pred CeehH-HHHHHHHHHHHHHHhCCCeEEEEEEeeCCccC-CCCEEEEEEEEEeCCCceEecC
Confidence 98886 678899999998774 345569999 679999999999 46555543
No 13
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.6e-59 Score=405.27 Aligned_cols=271 Identities=24% Similarity=0.312 Sum_probs=242.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChhhhcCCCc
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVN 83 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~~a~~~aD 83 (300)
..||.|+| +|+||.+++..++.+++.+ |++|+|.+ +++++|++|||+|.+.++ ..+++...| |.+.++++
T Consensus 20 ~~KItVVG-~G~VGmAca~siL~k~Lad-----el~lvDv~--~dklkGE~MDLqH~s~f~~~~~V~~~~D-y~~sa~S~ 90 (332)
T KOG1495|consen 20 HNKITVVG-VGQVGMACAISILLKGLAD-----ELVLVDVN--EDKLKGEMMDLQHGSAFLSTPNVVASKD-YSVSANSK 90 (332)
T ss_pred CceEEEEc-cchHHHHHHHHHHHhhhhh-----ceEEEecC--cchhhhhhhhhccccccccCCceEecCc-ccccCCCc
Confidence 46999999 7999999999999999876 89999997 478999999999987443 467776655 68899999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehhhHH
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~ld~~ 162 (300)
+||+|||..+++|++|++++++|+.+|+.+.+.+.+|.| ++++|++|||+|+|||+.||. ++||++| |+.||.||++
T Consensus 91 lvIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySp-d~~llvvSNPVDilTYv~wKL-SgfP~nRViGsGcnLDsa 168 (332)
T KOG1495|consen 91 LVIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSP-DCILLVVSNPVDILTYVTWKL-SGFPKNRVIGSGCNLDSA 168 (332)
T ss_pred EEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEEEecCchHHHHHHHHHH-cCCcccceeccCcCccHH
Confidence 999999999999999999999999999999999999986 899999999999999999999 8999998 6889999999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcc-------cccchhHHHHHHHhHHHHH
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD-------DAWLNGEFITTVQQRGAAI 235 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~-------~~~~~~~~~~~v~~~~~~i 235 (300)
|||+.++++||++|.++++++ +||||++.+|.||.+.| .|.++.++..+ +.| +++.++|.+.+|||
T Consensus 169 RFryLi~~~Lg~~pss~hgwI-iGEHGdSsV~vWSgvni----AGv~l~~l~~~~~t~~d~e~w--~eihK~v~~sayev 241 (332)
T KOG1495|consen 169 RFRYLIGNRLGVHPSSCHGWI-IGEHGDSSVPVWSGVNI----AGVSLKDLNPDLGTDYDPENW--KEIHKQVVDSAYEV 241 (332)
T ss_pred HHHHHHHHHhCCCcccceEEE-eeccCCccceecccccc----cceEHhHhChhhcCCCCHHHH--HHHHHHHHHHHHHH
Confidence 999999999999999999997 79999999999999999 99999998643 235 48999999999999
Q ss_pred HhcCCccccchHHHHHHHHHhhhh--------ccCCCccccCCCCCeEEEEeEEE--CCeeeeeeeccc
Q 022227 236 IKARKLSSALSAASSACDHIRDWV--------LGTPEVGSLLIFTPMIYTELVSW--LEPWTAIVGHLG 294 (300)
Q Consensus 236 ~~~kg~t~~~s~a~ai~~~~~~~~--------~~t~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~~~~~ 294 (300)
+++||+|+| +.+.++++.+++++ .+|...|.|||.+|||||+||.+ ++..+.|-+||-
T Consensus 242 iklKGyTsw-aIglsva~l~~ail~n~~~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~~Lt 309 (332)
T KOG1495|consen 242 IKLKGYTSW-AIGLSVADLAQAILRNLRRIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQKLT 309 (332)
T ss_pred HHhcCchHH-HHHHHHHHHHHHHHhCcCceeeeeeccccccCCCCceEEecceeecCCchhhhhcccCC
Confidence 999999997 56666666665543 57777899999999999999999 688888888763
No 14
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=6.3e-59 Score=424.87 Aligned_cols=265 Identities=83% Similarity=1.199 Sum_probs=235.0
Q ss_pred HHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHH
Q 022227 25 IARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMS 104 (300)
Q Consensus 25 L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~ 104 (300)
|+++.+||.++++.++|+|+++++++++|+++||.|++.++...+..+++.+++++|||+||++||.|+++|++|.|++.
T Consensus 2 ~~~g~~~g~~~~~~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~ 81 (309)
T PLN00135 2 IARGVMLGPDQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDVMS 81 (309)
T ss_pred cccccccCCCCeEEEEEecCcccccchhhHHHHHHhhhHHhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHH
Confidence 45677888888899999999876789999999999998665556666667789999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhh-cCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehhhHHHHHHHHHHHcCCCCCCeEEE
Q 022227 105 KNVSIYKAQASALEQH-AAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (300)
Q Consensus 105 ~N~~i~~~i~~~i~~~-~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~ld~~R~~~~la~~l~v~~~~V~~~ 182 (300)
.|+++++++++.|+++ +| ++++|++|||+|+||+++++. +++|+++ |+++|.||++||++.+|+++|+++++|+..
T Consensus 82 ~N~~I~~~i~~~i~~~~~p-~aivivvsNPvDv~t~~~~~~-sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~ 159 (309)
T PLN00135 82 KNVSIYKSQASALEKHAAP-DCKVLVVANPANTNALILKEF-APSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNV 159 (309)
T ss_pred HHHHHHHHHHHHHHHhcCC-CeEEEEeCCcHHHHHHHHHHH-cCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceee
Confidence 9999999999999996 66 899999999999999999998 6887766 799999999999999999999999999543
Q ss_pred EEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCccccchHHHHHHHHHhhhhccC
Q 022227 183 IIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGT 262 (300)
Q Consensus 183 ~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t~~~s~a~ai~~~~~~~~~~t 262 (300)
.||||||++|||+||+++|++|++|+|+.+++.+++|+.++|.++++++|++|+++|+.++++++|.++++++++|+.++
T Consensus 160 ~VlGeHG~s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~kg~t~~~ia~a~~~iv~ai~~~~ 239 (309)
T PLN00135 160 IIWGNHSSTQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGT 239 (309)
T ss_pred EEEEcCCCceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHhCC
Confidence 45999999999999999999999999999987666676789999999999999998544555799999999999988753
Q ss_pred ----------CCccccCCCCCeEEEEeEEE-CCeeeeeee
Q 022227 263 ----------PEVGSLLIFTPMIYTELVSW-LEPWTAIVG 291 (300)
Q Consensus 263 ----------~~~g~ygi~~~v~~s~Pv~~-~~~~~~~~~ 291 (300)
..+|+||+|+|++||+||++ .+.|..|..
T Consensus 240 ~~~~v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~ 279 (309)
T PLN00135 240 PEGTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQG 279 (309)
T ss_pred cCCeEEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecC
Confidence 33499999889999999999 588888743
No 15
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=9.5e-59 Score=424.74 Aligned_cols=264 Identities=35% Similarity=0.568 Sum_probs=233.5
Q ss_pred HHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEEEeCCCCCCCCCcHHH
Q 022227 22 VPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKD 101 (300)
Q Consensus 22 a~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~d 101 (300)
.+.|+++++|| ++++.++|+|+++++++++|+++||.|+.++.......+++.+++++|||+||++||.||++|++|.|
T Consensus 2 ~~~~~~g~~~g-~~~~~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~d 80 (313)
T TIGR01756 2 SHWIANGDLYG-NRPVCLHLLEIPPALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRAD 80 (313)
T ss_pred cceeccCcccC-CCeEEEEEecCCCccchhHhHHHHHHHhccccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHH
Confidence 35677888999 89999999999887799999999999998544433445667668999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH-HHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 102 VMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK-EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 102 l~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~-~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
++..|+++++++++.|++++|+++++|++|||+|+||++++ +. +++|+++|+++|.||++|++++||++++++|++|+
T Consensus 81 ll~~N~~I~~~i~~~i~~~a~~~~ivivvtNPvDv~t~v~~~~~-sg~p~~vig~gt~LDsaR~r~~la~~l~v~~~~V~ 159 (313)
T TIGR01756 81 LLTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLHA-PKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIY 159 (313)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHHHHHc-CCCCHHHEEecccHHHHHHHHHHHHHhCcChhhee
Confidence 99999999999999999999877899999999999999995 65 89998888999999999999999999999999998
Q ss_pred EEEEecCCCCceeeeccceeeeccCCCcchhhh--hcccccchhHHHHHHHhHHHHHHhcCCccccchHHHHHHHHHhhh
Q 022227 181 NVIIWGNHSSSQYPDVNHATVNTAAGEKPVREL--VKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDW 258 (300)
Q Consensus 181 ~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~--~~~~~~~~~~~~~~v~~~~~~i~~~kg~t~~~s~a~ai~~~~~~~ 258 (300)
+++||||||++|||+||+++|+. +|+|+..+ +. ++|..+++.++++++|++|+++||+|++.++|.++++++++|
T Consensus 160 ~~~V~GeHG~s~vp~~S~~~V~~--~G~~~~~~~~~~-~~~~~~~i~~~v~~~g~~Ii~~kg~t~~~~~a~ai~~iv~ai 236 (313)
T TIGR01756 160 HVVVWGNHAESMVADLTHAEFTK--NGKHQKVFDELC-RDYPEPDFFEVIAQRAWKILEMRGFTSAASPVKASLQHMKAW 236 (313)
T ss_pred eeEEEECCCCceeecccccEEec--CCeehhHhhhcC-cHhHHHHHHHHHHHHHHHHHhCcCCcchHHHHHHHHHHHHHH
Confidence 88779999999999999999964 78886554 42 246678999999999999999999888866778999999999
Q ss_pred hccCC----------C--ccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 259 VLGTP----------E--VGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 259 ~~~t~----------~--~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
+.++. . +|+||+|+|++||+||++ ++.|.+|.
T Consensus 237 l~~~~~~~i~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive 282 (313)
T TIGR01756 237 LFGTRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVE 282 (313)
T ss_pred hcCCCCCeEEEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcC
Confidence 87543 2 249999999999999999 58999987
No 16
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=2.6e-58 Score=420.77 Aligned_cols=264 Identities=20% Similarity=0.245 Sum_probs=236.8
Q ss_pred EEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEEEeC
Q 022227 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (300)
Q Consensus 10 IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi~~a 89 (300)
||| +|+||+++++.|+.+++++ |++|+|++ +++++|+++||+|+..++..++.++.+.+++++|||+||++|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~-----el~L~Di~--~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVita 72 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIAD-----EIVLIDIN--KDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITA 72 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCC-----EEEEEeCC--CChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECC
Confidence 689 7999999999999998876 89999996 478999999999998666556667777799999999999999
Q ss_pred CCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-EeeehhhHHHHHHHH
Q 022227 90 GFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRALGQI 168 (300)
Q Consensus 90 g~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ld~~R~~~~l 168 (300)
|.||+|||+|.|++..|+++++++++.+++++| ++++|++|||+|++|++++++ +++|++++ +.+|.||++|+++++
T Consensus 73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p-~~~vivvsNP~d~~t~~~~~~-sg~p~~~viG~gt~LDs~R~~~~l 150 (299)
T TIGR01771 73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGF-DGIFLVATNPVDILTYVAWKL-SGFPKNRVIGSGTVLDTARLRYLL 150 (299)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeCCHHHHHHHHHHHH-hCCCHHHEEeccchHHHHHHHHHH
Confidence 999999999999999999999999999999997 789999999999999999998 79999885 778999999999999
Q ss_pred HHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcc----cccchhHHHHHHHhHHHHHHhcCCcccc
Q 022227 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRGAAIIKARKLSSA 244 (300)
Q Consensus 169 a~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~----~~~~~~~~~~~v~~~~~~i~~~kg~t~~ 244 (300)
|+++++++.+|+++ ||||||++|+|+||+++| +|+|+.+++++ ++|..+++.++++++|++|++.||+|++
T Consensus 151 a~~l~v~~~~V~~~-v~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~~ 225 (299)
T TIGR01771 151 AEKLGVDPQSVHAY-IIGEHGDSEVPVWSSATI----GGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATYY 225 (299)
T ss_pred HHHhCcCcCeEEEE-EEecCCCceeeceeeeEE----CCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeeeH
Confidence 99999999999998 599999999999999999 99999998754 1334578999999999999999998775
Q ss_pred chHHHHHHHHHhhhhcc--------CCCccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 245 LSAASSACDHIRDWVLG--------TPEVGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 245 ~s~a~ai~~~~~~~~~~--------t~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
++|.++++++++|+.+ ++..|+||++ |+|||+||++ ++.+..+.
T Consensus 226 -~~a~a~~~~i~ail~d~~~v~~~s~~~~g~yg~~-~~~~s~P~~ig~~Gv~~i~~ 279 (299)
T TIGR01771 226 -GIGMAVARIVEAILHDENRVLPVSAYLDGEYGIK-DVYIGVPAVLGRNGVEEIIE 279 (299)
T ss_pred -HHHHHHHHHHHHHHcCCCcEEEEEEEecccCCCC-CEEEEEEEEEeCCeeEEEcc
Confidence 6788999999998754 4556899985 8999999999 57777764
No 17
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=1e-57 Score=419.91 Aligned_cols=272 Identities=21% Similarity=0.285 Sum_probs=240.1
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (300)
|++.++||+||| +|.||+++++.|+..++++ +|+|+|++ +++++|+++||+|+.... .++.++++.+++++
T Consensus 2 ~~~~~~ki~iiG-aG~vG~~~a~~l~~~~~~~-----el~L~D~~--~~~~~g~~~Dl~~~~~~~-~~~~i~~~~~~~~~ 72 (315)
T PRK00066 2 MKKQHNKVVLVG-DGAVGSSYAYALVNQGIAD-----ELVIIDIN--KEKAEGDAMDLSHAVPFT-SPTKIYAGDYSDCK 72 (315)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCC--CchhHHHHHHHHhhcccc-CCeEEEeCCHHHhC
Confidence 556778999999 5999999999999988876 89999996 478999999999998333 45666667789999
Q ss_pred CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-Eeeehh
Q 022227 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL 159 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~l 159 (300)
|||+||++||.||+||++|.|++..|+++++++++.+++++| ++++|++|||+|+++++++++ +++|++++ +.+|.|
T Consensus 73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~-~~~vivvsNP~d~~~~~~~k~-sg~p~~~viG~gt~L 150 (315)
T PRK00066 73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGF-DGIFLVASNPVDILTYATWKL-SGFPKERVIGSGTSL 150 (315)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEccCcHHHHHHHHHHH-hCCCHHHEeecCchH
Confidence 999999999999999999999999999999999999999997 789999999999999999998 78999886 667999
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccch----hHHHHHHHhHHHHH
Q 022227 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLN----GEFITTVQQRGAAI 235 (300)
Q Consensus 160 d~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~----~~~~~~v~~~~~~i 235 (300)
|+.|+++.+|+++|+++++|++++ |||||++|+|+||+++| +|+|+.+++.+..|.. +++.++++++|++|
T Consensus 151 Ds~R~~~~la~~l~v~~~~V~~~v-iGeHG~s~v~~~S~~~v----~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~i 225 (315)
T PRK00066 151 DSARFRYMLSEKLDVDPRSVHAYI-IGEHGDTEFPVWSHANV----AGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEI 225 (315)
T ss_pred HHHHHHHHHHHHhCCCcccEEEEE-EecCCCcceecceeceE----CCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999985 89999999999999999 9999999987655543 47999999999999
Q ss_pred HhcCCccccchHHHHHHHHHhhhhc--------cCCCccccCCCCCeEEEEeEEEC-Ceeeeee
Q 022227 236 IKARKLSSALSAASSACDHIRDWVL--------GTPEVGSLLIFTPMIYTELVSWL-EPWTAIV 290 (300)
Q Consensus 236 ~~~kg~t~~~s~a~ai~~~~~~~~~--------~t~~~g~ygi~~~v~~s~Pv~~~-~~~~~~~ 290 (300)
++.||+|++ ++|.++++++++++. |+...|+|| ++|+|||+||+++ +-|..+.
T Consensus 226 i~~kg~t~~-~~a~~~~~i~~ail~~~~~v~~~sv~~~g~yg-~~~v~~S~Pv~ig~~Gv~~i~ 287 (315)
T PRK00066 226 IEKKGATYY-GIAMALARITKAILNNENAVLPVSAYLEGQYG-EEDVYIGVPAVVNRNGIREIV 287 (315)
T ss_pred HhcCCeehH-HHHHHHHHHHHHHHcCCCeEEEEEEEeccccC-CCCEEEEeEEEEeCCcEEEEc
Confidence 999998885 788889999988764 345559999 6799999999994 4455443
No 18
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.6e-57 Score=417.66 Aligned_cols=270 Identities=24% Similarity=0.259 Sum_probs=236.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~~a~~~a 82 (300)
+.+||+||| +|+||+++++.|+.+++.. |++|+|+++ ++++|+++||+|+.... ...+..+++ +++++||
T Consensus 2 ~~~Ki~IiG-aG~VG~~~a~~l~~~~~~~-----el~LiD~~~--~~~~g~a~Dl~~~~~~~~~~~v~~~~d-y~~~~~a 72 (312)
T cd05293 2 PRNKVTVVG-VGQVGMACAISILAKGLAD-----ELVLVDVVE--DKLKGEAMDLQHGSAFLKNPKIEADKD-YSVTANS 72 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHHHHHhhccCCCCEEEECCC-HHHhCCC
Confidence 457999999 6999999999999988765 899999974 68999999999998322 234554444 6789999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehhhH
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDH 161 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~ld~ 161 (300)
|+||++||.++++||+|.|++.+|+++++++++.|++++| ++++|++|||+|++|++++++ +++|++| |+.+|.||+
T Consensus 73 divvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p-~~~vivvsNP~d~~t~~~~k~-sg~p~~~viG~gt~Ld~ 150 (312)
T cd05293 73 KVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSP-NAILLVVSNPVDIMTYVAWKL-SGLPKHRVIGSGCNLDS 150 (312)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEccChHHHHHHHHHHH-hCCCHHHEEecCchHHH
Confidence 9999999999999999999999999999999999999997 689999999999999999998 7999998 566799999
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcc-----cccchhHHHHHHHhHHHHHH
Q 022227 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD-----DAWLNGEFITTVQQRGAAII 236 (300)
Q Consensus 162 ~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~-----~~~~~~~~~~~v~~~~~~i~ 236 (300)
+|+++.+|+++++++++|++++ |||||++|+|+||+++| +|+|+.+++.. ++...+++.++++++|++|+
T Consensus 151 ~R~~~~la~~l~v~~~~v~~~v-~GeHG~s~vp~~S~~~i----~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii 225 (312)
T cd05293 151 ARFRYLIAERLGVAPSSVHGWI-IGEHGDSSVPVWSGVNV----AGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVI 225 (312)
T ss_pred HHHHHHHHHHhCCChhhEEEEE-eecCCCCccccceeceE----CCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999986 89999999999999999 99999998632 11123689999999999999
Q ss_pred hcCCccccchHHHHHHHHHhhhhccC--------CCccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 237 KARKLSSALSAASSACDHIRDWVLGT--------PEVGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 237 ~~kg~t~~~s~a~ai~~~~~~~~~~t--------~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
++||.|++ ++|.++++++++|+.++ +.+|.||+|+|++||+||++ ++.|..+.
T Consensus 226 ~~kg~t~~-~~a~a~~~ii~ail~d~~~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~ 288 (312)
T cd05293 226 KLKGYTSW-AIGLSVADLVDAILRNTGRVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIK 288 (312)
T ss_pred HhcCCchH-HHHHHHHHHHHHHHcCCCeEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEec
Confidence 99997775 78899999999987543 44589999999999999999 58777764
No 19
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=1.8e-57 Score=421.88 Aligned_cols=266 Identities=21% Similarity=0.298 Sum_probs=231.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEe-CChhhhcCCCcE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDAVEACTGVNI 84 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~-~~~~~a~~~aDv 84 (300)
+||+||| +|+||+++++.|+..++++ |++|+|+++ ++++|+++||+|++..+.. ..++ +..+++++|||+
T Consensus 38 ~KI~IIG-aG~VG~~~a~~l~~~~l~~-----el~LiDi~~--~~~~g~a~DL~~~~~~~~~-~~i~~~~dy~~~~daDi 108 (350)
T PLN02602 38 TKVSVVG-VGNVGMAIAQTILTQDLAD-----ELALVDVNP--DKLRGEMLDLQHAAAFLPR-TKILASTDYAVTAGSDL 108 (350)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCC--chhhHHHHHHHhhhhcCCC-CEEEeCCCHHHhCCCCE
Confidence 6999999 6999999999999988876 899999974 7899999999998743322 3343 234788999999
Q ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-EeeehhhHHH
Q 022227 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNR 163 (300)
Q Consensus 85 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ld~~R 163 (300)
||++||.++++|++|.|++.+|+++++++++.|++++| ++++|++|||+|++|++++++ +++|++|+ +.+|.||++|
T Consensus 109 VVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p-~~ivivvtNPvdv~t~~~~k~-sg~p~~rviG~gt~LDs~R 186 (350)
T PLN02602 109 CIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSP-DTILLIVSNPVDVLTYVAWKL-SGFPANRVIGSGTNLDSSR 186 (350)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCchHHHHHHHHHH-hCCCHHHEEeecchHHHHH
Confidence 99999999999999999999999999999999999997 689999999999999999998 68999996 6678999999
Q ss_pred HHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhccc------ccchhHHHHHHHhHHHHHHh
Q 022227 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD------AWLNGEFITTVQQRGAAIIK 237 (300)
Q Consensus 164 ~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~------~~~~~~~~~~v~~~~~~i~~ 237 (300)
+++++|+++|+++++|++++ |||||++|+|+||+++| +|+|+.+++.+. +| .+++.++++++|++|++
T Consensus 187 ~r~~lA~~l~v~~~~V~~~V-iGeHGds~vp~wS~~~i----~G~pl~~~~~~~~~~~~~~~-~~~i~~~v~~~g~eIi~ 260 (350)
T PLN02602 187 FRFLIADHLDVNAQDVQAYI-VGEHGDSSVALWSSVSV----GGVPVLSFLEKQQIAYEKET-LEEIHRAVVDSAYEVIK 260 (350)
T ss_pred HHHHHHHHhCCCccceeeeE-EecCCCceEeeeeeeeE----CCEEHHHHhhccCCccCHHH-HHHHHHHHHHHHHHHHh
Confidence 99999999999999999985 89999999999999999 999999986531 22 36799999999999999
Q ss_pred cCCccccchHHHHHHHHHhhhhc--------cCCCccccCC-CCCeEEEEeEEE--CCeeeee
Q 022227 238 ARKLSSALSAASSACDHIRDWVL--------GTPEVGSLLI-FTPMIYTELVSW--LEPWTAI 289 (300)
Q Consensus 238 ~kg~t~~~s~a~ai~~~~~~~~~--------~t~~~g~ygi-~~~v~~s~Pv~~--~~~~~~~ 289 (300)
.||.|++ ++|.++++++++++. ++..+|+||+ ++|+|||+||++ ++.+.++
T Consensus 261 ~KG~t~~-gia~a~a~ii~ail~d~~~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~ 322 (350)
T PLN02602 261 LKGYTSW-AIGYSVASLVRSLLRDQRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVV 322 (350)
T ss_pred cCCccHH-HHHHHHHHHHHHHHhcCCCeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEe
Confidence 9997774 788888888887653 4555699999 489999999999 4555554
No 20
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=7.5e-56 Score=407.07 Aligned_cols=267 Identities=24% Similarity=0.320 Sum_probs=235.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||+|+| +|.+|+++++.|+..++.. +|+|+|+++ +++++.++||.|+..+......+..+.++++++||+|
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~-----ei~l~D~~~--~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIAD-----ELVLIDINE--EKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIV 72 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEE
Confidence 4899999 6999999999999888754 899999974 6789999999998754444444445667889999999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehhhHHHH
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRA 164 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~ld~~R~ 164 (300)
|+++|.|+++|++|.|++.+|+++++++++.+++++| ++++|++|||+|++|++++++ +++|+++ |+.+|.||++|+
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~-~~~vivvsNP~d~~~~~~~~~-~g~p~~~v~g~gt~LDs~R~ 150 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGF-DGIFLVASNPVDVITYVVQKL-SGLPKNRVIGTGTSLDTARL 150 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEecChHHHHHHHHHHH-hCcCHHHEeeccchHHHHHH
Confidence 9999999999999999999999999999999999998 789999999999999999998 8999999 577899999999
Q ss_pred HHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccc---hhHHHHHHHhHHHHHHhcCCc
Q 022227 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIKARKL 241 (300)
Q Consensus 165 ~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~---~~~~~~~v~~~~~~i~~~kg~ 241 (300)
++++|+++++++.+|+++ ||||||++|+|+||+++| +|+|+.+++.+..|. .+++.++++++|++|+++||+
T Consensus 151 ~~~la~~l~v~~~~v~~~-V~G~Hg~s~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~ 225 (306)
T cd05291 151 RRALAEKLNVDPRSVHAY-VLGEHGDSQFVAWSTVTV----GGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIINGKGA 225 (306)
T ss_pred HHHHHHHHCCCcccceEE-EEecCCCceeecceeeEE----cCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHccCc
Confidence 999999999999999997 599999999999999999 999999988765554 468999999999999999998
Q ss_pred cccchHHHHHHHHHhhhhcc--------CCCccccCCCCCeEEEEeEEE--CCeeeee
Q 022227 242 SSALSAASSACDHIRDWVLG--------TPEVGSLLIFTPMIYTELVSW--LEPWTAI 289 (300)
Q Consensus 242 t~~~s~a~ai~~~~~~~~~~--------t~~~g~ygi~~~v~~s~Pv~~--~~~~~~~ 289 (300)
|++ ++|.|+++++++|+.+ +...|+|| ++|+|||+||++ ++.+..+
T Consensus 226 t~~-~~a~a~~~~~~ail~~~~~v~~~s~~~~g~yg-~~~v~~s~P~~ig~~Gv~~i~ 281 (306)
T cd05291 226 TYY-GIATALARIVKAILNDENAILPVSAYLDGEYG-EKDVYIGVPAIIGRNGVEEVI 281 (306)
T ss_pred cHH-HHHHHHHHHHHHHHcCCCEEEEEEEEeccccC-CCCEEEEEEEEEeCCCEEEEE
Confidence 775 7788999999988753 44459999 579999999999 4655544
No 21
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=4.2e-55 Score=400.74 Aligned_cols=265 Identities=23% Similarity=0.319 Sum_probs=237.4
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCc-ccEEEeCChhhhcCCCcEEE
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVNIAV 86 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~-~~v~~~~~~~~a~~~aDvVi 86 (300)
|+|+| +|.||+++++.|+..++++ +++|+|+++ ++++++++||.|+..++. .++..+++ +++++|||+||
T Consensus 1 i~iiG-aG~VG~~~a~~l~~~~~~~-----el~l~D~~~--~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVI 71 (300)
T cd00300 1 ITIIG-AGNVGAAVAFALIAKGLAS-----ELVLVDVNE--EKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVV 71 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEE
Confidence 58999 6999999999999988876 899999974 789999999999886532 23333344 78999999999
Q ss_pred EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-EeeehhhHHHHH
Q 022227 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRAL 165 (300)
Q Consensus 87 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ld~~R~~ 165 (300)
+++|.|++++++|.+++.+|+++++++++.|++++| ++++|++|||+|+++++++++ +++|++|+ +.+|.||+.|++
T Consensus 72 itag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p-~~~viv~sNP~d~~~~~~~~~-sg~~~~kviG~gt~lDs~r~~ 149 (300)
T cd00300 72 ITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGP-DAIILVVSNPVDILTYVAQKL-SGLPKNRVIGSGTLLDSARFR 149 (300)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEccChHHHHHHHHHHH-hCcCHHHEEecCCcHHHHHHH
Confidence 999999999999999999999999999999999996 789999999999999999998 78998886 556999999999
Q ss_pred HHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCccccc
Q 022227 166 GQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSAL 245 (300)
Q Consensus 166 ~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t~~~ 245 (300)
+++|+++++++.+|++++ +||||++|+|+||+++| +|+|+.+++++++|..++|.+++++++++|++.||+|++
T Consensus 150 ~~la~~l~v~~~~v~~~v-iGeHg~s~v~~~S~~~v----~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~kg~t~~- 223 (300)
T cd00300 150 SLLAEKLDVDPQSVHAYV-LGEHGDSQVVAWSTATV----GGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATNY- 223 (300)
T ss_pred HHHHHHhCCCcccEEEEE-EeccCCceeeeeeeeEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHccCcchH-
Confidence 999999999999999985 79999999999999999 999999998776777889999999999999999998775
Q ss_pred hHHHHHHHHHhhhhccC--------CCccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 246 SAASSACDHIRDWVLGT--------PEVGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 246 s~a~ai~~~~~~~~~~t--------~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
++|.++++++++|+.+. ...|+|| ++|++||+||++ ++.|..+.
T Consensus 224 ~~a~a~~~~~~ai~~~~~~v~~~s~~~~g~yg-~~~~~~s~Pv~ig~~Gi~~i~~ 277 (300)
T cd00300 224 GIATAIADIVKSILLDERRVLPVSAVQEGQYG-IEDVALSVPAVVGREGVVRILE 277 (300)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEEEecCccC-CCCEEEEEEEEEeCCCeEEEec
Confidence 89999999999987543 3458999 679999999999 69998874
No 22
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.7e-53 Score=389.34 Aligned_cols=257 Identities=24% Similarity=0.325 Sum_probs=216.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEe---CChhhhcCCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT---TDAVEACTGV 82 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~---~~~~~a~~~a 82 (300)
|||+||||+|+||+++++.|+.+++.. |++|+|++ +++|+++||+|+..+ ..+... ++++++++||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~-----elvLiDi~----~a~g~alDL~~~~~~--~~i~~~~~~~~~y~~~~da 69 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIV----NTPGVAADLSHINTP--AKVTGYLGPEELKKALKGA 69 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEEecC----ccceeehHhHhCCCc--ceEEEecCCCchHHhcCCC
Confidence 599999966999999999999888765 89999995 689999999998732 234432 3458999999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhH----HHHHHHHCCCCCCCcEEeeeh
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLTR 158 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~----~~~~~~~~~~~p~~~i~~~t~ 158 (300)
|+||+|||.||+||++|.|++..|+++++++++.+++++| ++++|++|||+|+| ++++++. +++|++|+.|.|.
T Consensus 70 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p-~a~vivvtNPvDv~~~i~t~~~~~~-s~~p~~rviG~~~ 147 (310)
T cd01337 70 DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACP-KALILIISNPVNSTVPIAAEVLKKA-GVYDPKRLFGVTT 147 (310)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEccCchhhHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence 9999999999999999999999999999999999999997 79999999999997 7888887 8999999877778
Q ss_pred hhHHHHHHHHHHHcCCCCCCeEEEEEecCC-CCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHh
Q 022227 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNH-SSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (300)
Q Consensus 159 ld~~R~~~~la~~l~v~~~~V~~~~V~G~h-g~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (300)
||++|+++++|+++|+++++|+.++ |||| |++|||+||++.+ . .++ .+ ++ .++|.++++++|++|++
T Consensus 148 LDs~R~~~~la~~l~v~~~~V~~~v-~GeHsGds~vp~~S~~~~----~----~~~-~~-~~-~~~i~~~v~~~g~~Ii~ 215 (310)
T cd01337 148 LDVVRANTFVAELLGLDPAKVNVPV-IGGHSGVTILPLLSQCQP----P----FTF-DQ-EE-IEALTHRIQFGGDEVVK 215 (310)
T ss_pred hHHHHHHHHHHHHhCcCHHHEEEEE-EecCCCCceecccccccc----c----ccC-CH-HH-HHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999875 9999 8999999999987 2 122 22 22 46899999999999999
Q ss_pred cC-C-ccccchHHHHHHHHHhhhh---ccCC-------CccccCCCCCeEEEEeEEEC-Ceeeee
Q 022227 238 AR-K-LSSALSAASSACDHIRDWV---LGTP-------EVGSLLIFTPMIYTELVSWL-EPWTAI 289 (300)
Q Consensus 238 ~k-g-~t~~~s~a~ai~~~~~~~~---~~t~-------~~g~ygi~~~v~~s~Pv~~~-~~~~~~ 289 (300)
+| | .++++++|.++++++++|+ .++. ..|+ |+ +|+|||+||+++ +-|..|
T Consensus 216 ~k~gkg~t~~~~a~a~~~iv~aIl~~~~~~~~~~~~s~~~~~-g~-~~v~~s~P~~ig~~Gv~~i 278 (310)
T cd01337 216 AKAGAGSATLSMAYAGARFANSLLRGLKGEKGVIECAYVESD-VT-EAPFFATPVELGKNGVEKN 278 (310)
T ss_pred CccCCCCcchhHHHHHHHHHHHHHHhcCCCcceEEEEEEecc-CC-CceEEEEEEEEeCCeEEEE
Confidence 85 2 2445699999999999998 3321 2244 64 699999999994 335554
No 23
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-52 Score=387.12 Aligned_cols=268 Identities=24% Similarity=0.308 Sum_probs=231.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCc--ccEEEeCChhhhcCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTG 81 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~--~~v~~~~~~~~a~~~ 81 (300)
+.+||+|+| +|++|+++++.++..++ . +++|+|+++ +++++.++|+.|+..... .+++.+++ +++++|
T Consensus 4 ~~~KI~IIG-aG~vG~~ia~~l~~~~~-~-----~l~L~Di~~--~~~~g~~lDl~~~~~~~~~~~~i~~~~d-~~~l~~ 73 (319)
T PTZ00117 4 KRKKISMIG-AGQIGSTVALLILQKNL-G-----DVVLYDVIK--GVPQGKALDLKHFSTLVGSNINILGTNN-YEDIKD 73 (319)
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHCCC-C-----eEEEEECCC--ccchhHHHHHhhhccccCCCeEEEeCCC-HHHhCC
Confidence 457999999 69999999999988875 3 799999974 667899999999864332 34444444 569999
Q ss_pred CcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-Eeeehhh
Q 022227 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLD 160 (300)
Q Consensus 82 aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ld 160 (300)
||+||+++|.+++++++|.|++..|.++++++++.|+++|| ++++|++|||+|++++.++++ +++|++++ +.+|.||
T Consensus 74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p-~a~vivvsNP~di~t~~~~~~-s~~p~~rviG~gt~ld 151 (319)
T PTZ00117 74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCP-NAFVICVTNPLDCMVKVFQEK-SGIPSNKICGMAGVLD 151 (319)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecChHHHHHHHHHHh-hCCCcccEEEecchHH
Confidence 99999999999999999999999999999999999999997 689999999999999999997 79998886 4456999
Q ss_pred HHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccc---hhHHHHHHHhHHHHHHh
Q 022227 161 HNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIK 237 (300)
Q Consensus 161 ~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~---~~~~~~~v~~~~~~i~~ 237 (300)
++|+++++|+++|+++++|+.++ +||||++|+|+||+++| +|+|+.++++++.|. .+++.++++++|++|++
T Consensus 152 s~R~~~~la~~l~v~~~~v~~~v-iGeHg~~~v~~~s~~~v----~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~ 226 (319)
T PTZ00117 152 SSRFRCNLAEKLGVSPGDVSAVV-IGGHGDLMVPLPRYCTV----NGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVK 226 (319)
T ss_pred HHHHHHHHHHHhCCCcccceEEE-eecCCCcEEeceeeceE----CCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999886 69999999999999999 999999987654454 36799999999999999
Q ss_pred c--CCccccchHHHHHHHHHhhhhccC--------CCccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 238 A--RKLSSALSAASSACDHIRDWVLGT--------PEVGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 238 ~--kg~t~~~s~a~ai~~~~~~~~~~t--------~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
+ ||.+ ++++|.++++++++|+.++ +.+|+||++ |++||+||++ ++++..++
T Consensus 227 ~~~kg~t-~~~~a~a~~~~~~ail~~~~~v~~~s~~~~g~yg~~-~~~~s~P~~ig~~Gv~~i~~ 289 (319)
T PTZ00117 227 LLKKGSA-FFAPAAAIVAMIEAYLKDEKRVLVCSVYLNGQYNCK-NLFVGVPVVIGGKGIEKVIE 289 (319)
T ss_pred hcCCCCh-HHHHHHHHHHHHHHHhcCCCeEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEeC
Confidence 7 5544 4699999999999987654 345899996 9999999999 47777665
No 24
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=3.4e-52 Score=382.64 Aligned_cols=270 Identities=24% Similarity=0.357 Sum_probs=236.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC--cccEEEeCChhhhcCCCc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTGVN 83 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~--~~~v~~~~~~~~a~~~aD 83 (300)
|||+|+||+|.+|++++..|+..++++ +|+|+|+++..+++++.++|+.|+.... ..++..+++ ++++++||
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~-----~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVK-----EINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSD 74 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCC
Confidence 599999977999999999999988765 8999999655578999999999875332 234555555 67899999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-EeeehhhHH
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN 162 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ld~~ 162 (300)
+||+++|.|++++++|.+++..|+++++++++.|++++| ++++|+++||+|++|+++++. +++|++++ +.+|.||++
T Consensus 75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~-~~~viv~~npvd~~t~~~~~~-~g~~~~~viG~gt~LDs~ 152 (309)
T cd05294 75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAP-DTKILVVTNPVDVMTYKALKE-SGFDKNRVFGLGTHLDSL 152 (309)
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHHHh-cCCCHHHEeeccchHHHH
Confidence 999999999999999999999999999999999999997 789999999999999999998 68999885 666899999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCcc
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t 242 (300)
|++++||+++++++.+|++++ +||||++|+|+||+++| +|+|+.++++.+++..+++.++++++|++|++.||++
T Consensus 153 R~~~~la~~l~v~~~~v~~~v-iGeHg~s~~~~~S~~~i----~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~kg~t 227 (309)
T cd05294 153 RFKVAIAKHFNVHISEVHTRI-IGEHGDSMVPLISSTSI----GGIPIKRFPEYKDFDVEKIVETVKNAGQNIISLKGGS 227 (309)
T ss_pred HHHHHHHHHHCcChHHeEEEE-EecCCCceEeeeeecEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999886 79999999999999999 9999999875434556789999999999999999987
Q ss_pred ccchHHHHHHHHHhhhhccC--------CCcccc-CCCCCeEEEEeEEE--CCeeeeee
Q 022227 243 SALSAASSACDHIRDWVLGT--------PEVGSL-LIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 243 ~~~s~a~ai~~~~~~~~~~t--------~~~g~y-gi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
+ +++|.++++++++++.++ +..|+| |++ |+++|+||++ ++++..++
T Consensus 228 ~-~~~a~~~~~ii~ail~~~~~v~~vsv~~~g~~~~~~-~~~~svP~~ig~~Gv~~i~~ 284 (309)
T cd05294 228 E-YGPASAISNLVRTIANDERRILTVSTYLEGEIDGIR-DVCIGVPVKLGKNGIEEIVP 284 (309)
T ss_pred h-hhHHHHHHHHHHHHHCCCCeEEEEEEEECCccCCCC-CeEEEeEEEEcCCccEEEeC
Confidence 6 489999999999887554 345887 998 9999999999 46655554
No 25
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=2.6e-52 Score=382.13 Aligned_cols=251 Identities=25% Similarity=0.325 Sum_probs=211.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEe-C--ChhhhcCCCc
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T--DAVEACTGVN 83 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~-~--~~~~a~~~aD 83 (300)
||+||||+|+||+++++.|+.+++.. |++|+|+++ ++|+++||+|... ..++..+ . +++++++|||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~-----elvL~Di~~----a~g~a~DL~~~~~--~~~i~~~~~~~~~~~~~~daD 69 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVS-----ELSLYDIAG----AAGVAADLSHIPT--AASVKGFSGEEGLENALKGAD 69 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEecCCC----CcEEEchhhcCCc--CceEEEecCCCchHHHcCCCC
Confidence 79999977999999999999888765 899999973 6799999999762 2344432 2 3489999999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh----HHHHHHHHCCCCCCCcEEeeehh
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRL 159 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~----~~~~~~~~~~~~p~~~i~~~t~l 159 (300)
+||++||.+|+++++|.|++..|+++++++++.+.+++| ++++|++|||+|+ +++++++. +++|++|+.|.+.|
T Consensus 70 ivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p-~~iiivvsNPvDv~~~i~t~~~~~~-sg~p~~rViG~g~L 147 (312)
T TIGR01772 70 VVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCP-KAMILVITNPVNSTVPIAAEVLKKK-GVYDPNKLFGVTTL 147 (312)
T ss_pred EEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCC-CeEEEEecCchhhHHHHHHHHHHHh-cCCChHHEEeeecc
Confidence 999999999999999999999999999999999999997 7899999999998 88888887 79999997666679
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhc
Q 022227 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA 238 (300)
Q Consensus 160 d~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~ 238 (300)
|++|+++++|+++|+++++|+.++ |||||+ +|||+||++++ . |+ +++++ .+++.++++++|++|+++
T Consensus 148 DsaR~r~~la~~l~v~~~~v~~~V-iGeHg~~s~vp~~S~~~~----~--~~---~~~~~--~~~i~~~v~~~g~~Ii~~ 215 (312)
T TIGR01772 148 DIVRANTFVAELKGKDPMEVNVPV-IGGHSGETIIPLISQCPG----K--VL---FTEDQ--LEALIHRIQNAGTEVVKA 215 (312)
T ss_pred hHHHHHHHHHHHhCCCHHHeEEEE-EEecCCCccccccccccc----c--CC---CCHHH--HHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999885 999997 99999999986 2 22 22222 468999999999999998
Q ss_pred C-Cc-cccchHHHHHHHHHhhhh---cc-------CCCccccCCCCCeEEEEeEEEC
Q 022227 239 R-KL-SSALSAASSACDHIRDWV---LG-------TPEVGSLLIFTPMIYTELVSWL 283 (300)
Q Consensus 239 k-g~-t~~~s~a~ai~~~~~~~~---~~-------t~~~g~ygi~~~v~~s~Pv~~~ 283 (300)
| |. ++++++|.|+++++++++ .+ ++.+|+||+ +|+|||+||+++
T Consensus 216 k~gkg~t~~~ia~a~~~iv~ail~~~~d~~~v~~~s~~~g~yg~-~~v~~s~P~~ig 271 (312)
T TIGR01772 216 KAGAGSATLSMAFAGARFVLSLVRGLKGEEGVVECAYVESDGVT-EATFFATPLLLG 271 (312)
T ss_pred ccCCCChhHHHHHHHHHHHHHHHHhhCCCccEEEEEEEccCCCc-CceEEEEEEEEc
Confidence 4 32 344689989887777644 23 344588996 699999999994
No 26
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=9.7e-52 Score=379.80 Aligned_cols=267 Identities=21% Similarity=0.266 Sum_probs=233.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+| +|.||+++++.|+..++.. +++|+|+++ +++++.++|+.|+.... ....+.++.++++++||+|
T Consensus 1 mkI~IIG-aG~VG~~~a~~l~~~g~~~-----ev~l~D~~~--~~~~g~a~dl~~~~~~~-~~~~i~~~d~~~l~~aDiV 71 (308)
T cd05292 1 MKVAIVG-AGFVGSTTAYALLLRGLAS-----EIVLVDINK--AKAEGEAMDLAHGTPFV-KPVRIYAGDYADCKGADVV 71 (308)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCC-----EEEEEECCc--hhhhhHHHHHHcccccc-CCeEEeeCCHHHhCCCCEE
Confidence 4899999 6999999999999888654 899999974 67889999999986322 2233444567899999999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc-EEeeehhhHHHH
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRA 164 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~-i~~~t~ld~~R~ 164 (300)
|++++.+++++++|.+++..|+++++++++.+++++| +++++++|||+|+++++++++ +++|++| |+.+|.||+.|+
T Consensus 72 iita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~-~giiiv~tNP~d~~~~~~~~~-sg~p~~~viG~gt~LDs~R~ 149 (308)
T cd05292 72 VITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAP-DAILLVVTNPVDVLTYVAYKL-SGLPPNRVIGSGTVLDTARF 149 (308)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCcHHHHHHHHHHH-HCcCHHHeecccchhhHHHH
Confidence 9999999999999999999999999999999999997 689999999999999999998 6999998 577899999999
Q ss_pred HHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhccc-----ccchhHHHHHHHhHHHHHHhcC
Q 022227 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD-----AWLNGEFITTVQQRGAAIIKAR 239 (300)
Q Consensus 165 ~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~-----~~~~~~~~~~v~~~~~~i~~~k 239 (300)
++++|+++++++.+|++++ |||||++|+|+||+++| +|+|+.+++.+. ++..+++.++++++|++|++.|
T Consensus 150 ~~~la~~~~v~~~~v~~~v-iGeHg~~~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~k 224 (308)
T cd05292 150 RYLLGEHLGVDPRSVHAYI-IGEHGDSEVAVWSSANI----GGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERK 224 (308)
T ss_pred HHHHHHHhCCCccceecee-eccCCCcEEecceeeeE----CCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999885 89999999999999999 999999987542 1235689999999999999999
Q ss_pred CccccchHHHHHHHHHhhhhc--------cCCCccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 240 KLSSALSAASSACDHIRDWVL--------GTPEVGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 240 g~t~~~s~a~ai~~~~~~~~~--------~t~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
|.|+ +++|.++++++++++. ++..+|+||+ +|+|||+||++ ++.+..++
T Consensus 225 g~t~-~~~a~a~~~i~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~ 283 (308)
T cd05292 225 GATY-YAIGLALARIVEAILRDENSVLTVSSLLDGQYGI-KDVALSLPCIVGRSGVERVLP 283 (308)
T ss_pred CccH-HHHHHHHHHHHHHHHcCCCcEEEEEEEEcccCCC-CCEEEEEEEEEeCCceEEecC
Confidence 9777 4788899999988764 3445589998 69999999999 58887765
No 27
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=2.3e-51 Score=378.53 Aligned_cols=273 Identities=20% Similarity=0.283 Sum_probs=232.5
Q ss_pred CCC-CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCc--ccEEEeCChhh
Q 022227 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVE 77 (300)
Q Consensus 1 m~~-~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~--~~v~~~~~~~~ 77 (300)
|.| +.+||+||| +|++|+++++.++..++. +++|+|+++ +++++.++|+.|...... .++..+++ ++
T Consensus 1 ~~~~~~~KI~IIG-aG~vG~~ia~~la~~gl~------~i~LvDi~~--~~~~~~~ld~~~~~~~~~~~~~I~~~~d-~~ 70 (321)
T PTZ00082 1 MTMIKRRKISLIG-SGNIGGVMAYLIVLKNLG------DVVLFDIVK--NIPQGKALDISHSNVIAGSNSKVIGTNN-YE 70 (321)
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCC------eEEEEeCCC--chhhHHHHHHHhhhhccCCCeEEEECCC-HH
Confidence 555 567999999 799999999999888763 699999975 567888999999753332 35554455 58
Q ss_pred hcCCCcEEEEeCCCCCCCCC-----cHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCc
Q 022227 78 ACTGVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN 152 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~g~-----~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~ 152 (300)
+++|||+||+++|.++++++ +|.+++..|+++++++++.|++++| ++++|++|||+|++++.+++. +++|++|
T Consensus 71 ~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p-~a~~iv~sNP~di~t~~~~~~-sg~p~~r 148 (321)
T PTZ00082 71 DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCP-NAFVIVITNPLDVMVKLLQEH-SGLPKNK 148 (321)
T ss_pred HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCcHHHHHHHHHHh-cCCChhh
Confidence 99999999999999999999 9999999999999999999999997 689999999999999999998 7999888
Q ss_pred E-EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhccccc---chhHHHHHH
Q 022227 153 I-TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW---LNGEFITTV 228 (300)
Q Consensus 153 i-~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~---~~~~~~~~v 228 (300)
+ +.+|.||++|+++.+|+++++++++|++++ +||||++|||+||+++| +|+|+.++++.+.+ ..+++.+++
T Consensus 149 viGlgt~lds~R~~~~la~~l~v~~~~v~~~v-iGeHg~s~v~~~S~~~i----~g~~~~~~~~~~~~~~~~~~~i~~~~ 223 (321)
T PTZ00082 149 VCGMAGVLDSSRLRTYIAEKLGVNPRDVHASV-IGAHGDKMVPLPRYVTV----GGIPLSEFIKKGLITQEEIDEIVERT 223 (321)
T ss_pred EEEecCcccHHHHHHHHHHHhCCCcccceeeE-EecCCCceEecceeeEE----CCEEHHHhhhcccCCHHHHHHHHHHH
Confidence 6 555799999999999999999999999986 79999999999999999 99999998643211 146799999
Q ss_pred HhHHHHHHhcCC-ccccchHHHHHHHHHhhhhcc--------CCCccccCCCCCeEEEEeEEE--CCeeeeeee
Q 022227 229 QQRGAAIIKARK-LSSALSAASSACDHIRDWVLG--------TPEVGSLLIFTPMIYTELVSW--LEPWTAIVG 291 (300)
Q Consensus 229 ~~~~~~i~~~kg-~t~~~s~a~ai~~~~~~~~~~--------t~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~~ 291 (300)
+++|++|+++|| .++++++|.++++++++++.+ +...|+||+ +|+|+|+||++ ++++.+++-
T Consensus 224 ~~~g~~i~~~~gkg~t~~~ia~a~~~i~~ail~d~~~v~~vs~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~~ 296 (321)
T PTZ00082 224 RNTGKEIVDLLGTGSAYFAPAAAAIEMAEAYLKDKKRVLPCSAYLEGQYGH-KDIYMGTPAVIGANGVEKIIEL 296 (321)
T ss_pred HHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHcCCCcEEEEEEEecccCCC-CCeEEEEEEEEeCCeEEEEeCC
Confidence 999999999753 244469999999999998754 344599999 69999999999 588777653
No 28
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=6.1e-51 Score=373.58 Aligned_cols=265 Identities=23% Similarity=0.296 Sum_probs=227.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC--cccEEEeCChhhhcCCCc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTGVN 83 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~--~~~v~~~~~~~~a~~~aD 83 (300)
+||+|+| +|.||+.+++.++..++. +++|+|+.+ +..++.++|+.+..... ..+++.+++. +++++||
T Consensus 2 ~KV~VIG-aG~vG~~iA~~la~~g~~------~VvlvDi~~--~l~~g~a~d~~~~~~~~~~~~~i~~t~d~-~~~~~aD 71 (305)
T TIGR01763 2 KKISVIG-AGFVGATTAFRLAEKELA------DLVLLDVVE--GIPQGKALDMYEASPVGGFDTKVTGTNNY-ADTANSD 71 (305)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHcCCC------eEEEEeCCC--ChhHHHHHhhhhhhhccCCCcEEEecCCH-HHhCCCC
Confidence 6999999 699999999999987652 699999964 56677888888765322 2456555664 6699999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-EeeehhhHH
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN 162 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ld~~ 162 (300)
+||+++|.|++++++|.|++..|++++++++++|.+++| ++++|++|||+|+++++++++ +++|++|+ +.+|.||++
T Consensus 72 iVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p-~~~iIv~tNP~di~t~~~~~~-sg~~~~rviG~g~~lds~ 149 (305)
T TIGR01763 72 IVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSP-NPIIVVVSNPLDAMTYVAWQK-SGFPKERVIGQAGVLDSA 149 (305)
T ss_pred EEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCcHHHHHHHHHHH-HCcCHHHEEEeccchHHH
Confidence 999999999999999999999999999999999999986 789999999999999999998 79999886 556799999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCc-
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKL- 241 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~- 241 (300)
|+++.+|+++++++.+|++++ |||||++|+|+||+++| +|+|+.+++.++. .+++.++++++|++|+++||.
T Consensus 150 R~~~~la~~l~v~~~~v~~~v-~GeHg~s~~~~wS~~~i----~g~~~~~~~~~~~--~~~l~~~v~~~g~~ii~~~~kg 222 (305)
T TIGR01763 150 RFRTFIAMELGVSVQDVTACV-LGGHGDAMVPLVRYSTV----AGIPVADLISAER--IAEIVERTRKGGGEIVNLLKQG 222 (305)
T ss_pred HHHHHHHHHhCcCHHHeeeeE-EecCCCcEEeeeeeeEE----CCEEHHHhcCHHH--HHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999995 89999999999999999 9999999876543 468999999999999998442
Q ss_pred cccchHHHHHHHHHhhhh--------ccCCCccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 242 SSALSAASSACDHIRDWV--------LGTPEVGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 242 t~~~s~a~ai~~~~~~~~--------~~t~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
++++++|.++++++++++ .+++.+|+||+ +|+|+|+||++ +++...++
T Consensus 223 ~t~~~~a~~~~~i~~ai~~~~~~v~~~s~~~~~~yg~-~~v~~s~P~~ig~~Gv~~i~~ 280 (305)
T TIGR01763 223 SAYYAPAASVVEMVEAILKDRKRVLPCAAYLDGQYGI-DGIYVGVPVILGKNGVEHIYE 280 (305)
T ss_pred ChHHHHHHHHHHHHHHHhCCCCeEEEEEEEecccCCC-CceEEEEEEEEeCCeEEEEeC
Confidence 334688888888887765 34555699998 69999999999 57766665
No 29
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=1.6e-49 Score=365.04 Aligned_cols=263 Identities=25% Similarity=0.345 Sum_probs=220.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~~a~~~a 82 (300)
++.||+||||+|+||+++++.|+.+++++ +++|+|+++ ++++++||.|+..+. ...+...++.+++++||
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~Di~~----~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~a 87 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVS-----ELHLYDIAN----TPGVAADVSHINTPAQVRGFLGDDQLGDALKGA 87 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCC-----EEEEEecCC----CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCC
Confidence 35799999977999999999999888876 899999963 788999999988542 12222345668999999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh----hHHHHHHHHCCCCCCCcEEeeeh
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN----TNALILKEFAPSIPAKNITCLTR 158 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~----~~~~~~~~~~~~~p~~~i~~~t~ 158 (300)
|+||++||.+++++++|.|++..|+++++++++.+++++| +++++++|||+| ++++.+++. +++|+++++|.+.
T Consensus 88 DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p-~aivivvSNPvD~~~~i~t~~~~~~-s~~p~~~viG~~~ 165 (323)
T PLN00106 88 DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCP-NALVNIISNPVNSTVPIAAEVLKKA-GVYDPKKLFGVTT 165 (323)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEeCCCccccHHHHHHHHHHc-CCCCcceEEEEec
Confidence 9999999999999999999999999999999999999997 789999999999 899988887 7999999878788
Q ss_pred hhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHh
Q 022227 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (300)
Q Consensus 159 ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (300)
||++|+++++|+++|+++.+|++++ +||||+ +|||+||++++ .. + +.+++ .+++.++++++|++|++
T Consensus 166 LDs~Rl~~~lA~~lgv~~~~V~~~V-iGeHg~~s~vp~~S~~~~----~~----~-~~~~~--~~~i~~~v~~~g~~Ii~ 233 (323)
T PLN00106 166 LDVVRANTFVAEKKGLDPADVDVPV-VGGHAGITILPLLSQATP----KV----S-FTDEE--IEALTKRIQNGGTEVVE 233 (323)
T ss_pred chHHHHHHHHHHHhCCChhheEEEE-EEeCCCccEeeehhccee----cc----c-CCHHH--HHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999986 799965 99999999987 21 2 22222 46899999999999999
Q ss_pred cC-C-ccccchHHHHHHHHHhhhhccCC----------CccccCCCCCeEEEEeEEE--CCeeeeeee
Q 022227 238 AR-K-LSSALSAASSACDHIRDWVLGTP----------EVGSLLIFTPMIYTELVSW--LEPWTAIVG 291 (300)
Q Consensus 238 ~k-g-~t~~~s~a~ai~~~~~~~~~~t~----------~~g~ygi~~~v~~s~Pv~~--~~~~~~~~~ 291 (300)
+| | .++++++|.++++++++|+.++. ..|+| ++++|||+||++ ++...++.-
T Consensus 234 ~k~~kg~t~~~~a~a~~~ii~ail~~~~~~~~v~~~s~~~~~~--~~~v~~s~P~~ig~~Gv~~i~~~ 299 (323)
T PLN00106 234 AKAGAGSATLSMAYAAARFADACLRGLNGEADVVECSYVQSEV--TELPFFASKVRLGRNGVEEVLGL 299 (323)
T ss_pred CccCCCCchHHHHHHHHHHHHHHHhccCCCceEEEEEEECccc--CCceEEEEEEEEcCCeeEEEcCC
Confidence 85 3 34556999999999999887422 12433 334999999999 577777654
No 30
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=7.8e-49 Score=360.16 Aligned_cols=259 Identities=24% Similarity=0.295 Sum_probs=217.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCC---hhhhcC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD---AVEACT 80 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~---~~~a~~ 80 (300)
++.||+||||+|+||+++++.|+..++.. +++|+|++ +++++++||.|+.. ...+...++ .+++++
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~-----elvL~Di~----~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~ 75 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVS-----ELSLYDIV----GAPGVAADLSHIDT--PAKVTGYADGELWEKALR 75 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCC-----EEEEEecC----CCcccccchhhcCc--CceEEEecCCCchHHHhC
Confidence 46799999977999999999998777654 89999993 57889999999764 123332322 279999
Q ss_pred CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH----HHCCCCCCCcEEee
Q 022227 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCL 156 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~----~~~~~~p~~~i~~~ 156 (300)
|||+||+++|.+++++++|.+++..|++++++++++++++++ +.+++++|||+|.++++++ +. +++|+++++|.
T Consensus 76 gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~-~~iviv~SNPvdv~~~~~~~~~~~~-sg~p~~~viG~ 153 (321)
T PTZ00325 76 GADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAP-KAIVGIVSNPVNSTVPIAAETLKKA-GVYDPRKLFGV 153 (321)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCcHHHHHHHHHhhhhhc-cCCChhheeec
Confidence 999999999999999999999999999999999999999997 6789999999999999986 54 78999997666
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHH
Q 022227 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI 235 (300)
Q Consensus 157 t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i 235 (300)
+.||++||++++|+++|++|++|++++ |||||+ +|||+||++ |+|+. +++ .+++.++++++|++|
T Consensus 154 g~LDs~R~r~~la~~l~v~~~~V~~~V-lGeHGd~s~v~~~S~~-------g~~l~----~~~--~~~i~~~v~~~g~~I 219 (321)
T PTZ00325 154 TTLDVVRARKFVAEALGMNPYDVNVPV-VGGHSGVTIVPLLSQT-------GLSLP----EEQ--VEQITHRVQVGGDEV 219 (321)
T ss_pred hhHHHHHHHHHHHHHhCcChhheEEEE-EeecCCcccccchhcc-------CCCCC----HHH--HHHHHHHHHHHHHHH
Confidence 679999999999999999999999885 899999 899999998 44552 222 468999999999999
Q ss_pred HhcCC--ccccchHHHHHHHHHhhhhcc---C-------CCccccCCCCCeEEEEeEEE--CCeeeeee
Q 022227 236 IKARK--LSSALSAASSACDHIRDWVLG---T-------PEVGSLLIFTPMIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 236 ~~~kg--~t~~~s~a~ai~~~~~~~~~~---t-------~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~ 290 (300)
+++|| .++++++|.++++++++|+.. . ...|+||+ +|+|||+||++ ++.-..+.
T Consensus 220 i~~k~~kg~t~~g~a~a~~~i~~ail~~~~~~~~v~~~~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~ 287 (321)
T PTZ00325 220 VKAKEGAGSATLSMAYAAAEWSTSVLKALRGDKGIVECAFVESDMRP-ECPFFSSPVELGKEGVERVLP 287 (321)
T ss_pred HhcccCCCCchHHHHHHHHHHHHHHHhhcCCCCCeEEEEEEecCCCC-CCeEEEEEEEEcCCeeEEEcC
Confidence 99873 355569999999999998743 2 23489996 69999999999 46655554
No 31
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=1.2e-48 Score=358.38 Aligned_cols=262 Identities=26% Similarity=0.354 Sum_probs=225.0
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCc--ccEEEeCChhhhcCCCcEE
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~--~~v~~~~~~~~a~~~aDvV 85 (300)
|+|+| +|.||+.+++.|+..++. +++|+|+++ +++++.++|+.+...... .+++.+++ +++++|||+|
T Consensus 1 I~IIG-aG~vG~~ia~~la~~~l~------eV~L~Di~e--~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dADiV 70 (300)
T cd01339 1 ISIIG-AGNVGATLAQLLALKELG------DVVLLDIVE--GLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSDVV 70 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhCCCc------EEEEEeCCC--cHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCCEE
Confidence 68999 699999999999877642 799999974 577888899988653332 35555555 6889999999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-EeeehhhHHHH
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRA 164 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ld~~R~ 164 (300)
|+++|.|++++++|.+++..|+++++++++.|++++| ++++|++|||+|+++++++++ +++|++|+ +.+|.||++|+
T Consensus 71 Iit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p-~~~iIv~sNP~di~t~~~~~~-s~~~~~rviGlgt~lds~r~ 148 (300)
T cd01339 71 VITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAP-NAIVIVVTNPLDVMTYVAYKA-SGFPRNRVIGMAGVLDSARF 148 (300)
T ss_pred EEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCcHHHHHHHHHHH-hCCCHHHEEEecchHHHHHH
Confidence 9999999999999999999999999999999999997 578999999999999999998 79998886 55569999999
Q ss_pred HHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcC--Ccc
Q 022227 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR--KLS 242 (300)
Q Consensus 165 ~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k--g~t 242 (300)
++++|+++++++.+|++++ +|+||++++|+||+++| +|.|+.+++.+++ .+++.+++++++++|++.| |+|
T Consensus 149 ~~~la~~l~v~~~~v~~~v-~G~hg~~~~~~~s~~~v----~g~~~~~~~~~~~--~~~~~~~v~~~~~~ii~~k~~g~t 221 (300)
T cd01339 149 RYFIAEELGVSVKDVQAMV-LGGHGDTMVPLPRYSTV----GGIPLTELITKEE--IDEIVERTRNGGAEIVNLLKTGSA 221 (300)
T ss_pred HHHHHHHhCCCccceEEEE-EeCCCCcceecceecEE----CCEEHHHhcChHH--HHHHHHHHHHHHHHHHhhcCCCch
Confidence 9999999999999999986 69999999999999999 9999999876654 4789999999999999987 544
Q ss_pred ccchHHHHHHHHHhhhhcc--------CCCccccCCCCCeEEEEeEEEC-Ceeeeee
Q 022227 243 SALSAASSACDHIRDWVLG--------TPEVGSLLIFTPMIYTELVSWL-EPWTAIV 290 (300)
Q Consensus 243 ~~~s~a~ai~~~~~~~~~~--------t~~~g~ygi~~~v~~s~Pv~~~-~~~~~~~ 290 (300)
+ +++|.++++++++++.+ +...|+||++ |++||+||+++ +-|..+.
T Consensus 222 ~-~~~a~~~~~i~~ail~~~~~i~~~s~~~~g~yg~~-~~~~s~P~~ig~~G~~~~~ 276 (300)
T cd01339 222 Y-YAPAAAIAEMVEAILKDKKRVLPCSAYLEGEYGIK-DIFVGVPVVLGKNGVEKII 276 (300)
T ss_pred h-HHHHHHHHHHHHHHHcCCCcEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEe
Confidence 4 58888999998877643 3445999997 99999999994 5555444
No 32
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=2e-48 Score=358.19 Aligned_cols=264 Identities=25% Similarity=0.353 Sum_probs=226.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCc--ccEEEeCChhhhcCCCc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVN 83 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~--~~v~~~~~~~~a~~~aD 83 (300)
+||+|+| +|++|+++++.++..++. +++|+|+++ +++++..+|+.+...+.. .+++.+++ +++++|||
T Consensus 3 ~KI~VIG-aG~vG~~ia~~la~~~~~------ev~L~D~~~--~~~~~~~~dl~~~~~~~~~~~~i~~~~d-~~~~~~aD 72 (307)
T PRK06223 3 KKISIIG-AGNVGATLAHLLALKELG------DVVLFDIVE--GVPQGKALDIAEAAPVEGFDTKITGTND-YEDIAGSD 72 (307)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCe------EEEEEECCC--chhHHHHHHHHhhhhhcCCCcEEEeCCC-HHHHCCCC
Confidence 7999999 599999999999877641 799999964 678889999988764432 34444445 57899999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-EeeehhhHH
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN 162 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ld~~ 162 (300)
+||+++|.|++++++|.+++.+|+++++++++.+++++| ++++|++|||+|++|++++++ +++|++|+ +.+|.||++
T Consensus 73 iVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~-~~~viv~tNP~d~~~~~~~~~-s~~~~~~viG~gt~lds~ 150 (307)
T PRK06223 73 VVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAP-DAIVIVVTNPVDAMTYVALKE-SGFPKNRVIGMAGVLDSA 150 (307)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCcHHHHHHHHHHH-hCCCcccEEEeCCCcHHH
Confidence 999999999999999999999999999999999999997 679999999999999999998 79999996 555799999
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhc--CC
Q 022227 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA--RK 240 (300)
Q Consensus 163 R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~--kg 240 (300)
|+++.||+++++++.+|++++ +||||++++|+||+++| +|.|+.++++ ++| .+++.+++++++++|++. |+
T Consensus 151 r~~~~la~~l~v~~~~v~~~v-iGehg~s~~p~~S~~~v----~g~~~~~~~~-~~~-~~~l~~~v~~~~~~ii~~~~kg 223 (307)
T PRK06223 151 RFRTFIAEELNVSVKDVTAFV-LGGHGDSMVPLVRYSTV----GGIPLEDLLS-KEK-LDEIVERTRKGGAEIVGLLKTG 223 (307)
T ss_pred HHHHHHHHHhCcChhhCcccE-EcCCCCcceEchhhCEE----CCEEHHHhCC-hHH-HHHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999986 79999999999999999 9999999864 345 478999999999999997 55
Q ss_pred ccccchHHHHHHHHHhhhhcc--------CCCccccCCCCCeEEEEeEEEC-Ceeeeee
Q 022227 241 LSSALSAASSACDHIRDWVLG--------TPEVGSLLIFTPMIYTELVSWL-EPWTAIV 290 (300)
Q Consensus 241 ~t~~~s~a~ai~~~~~~~~~~--------t~~~g~ygi~~~v~~s~Pv~~~-~~~~~~~ 290 (300)
++++++|.++++.+++++.+ +...|+||+ +|++||+||+++ +-|..+.
T Consensus 224 -~t~~~~A~~~~~ii~ail~~~~~~~~~~v~~~g~yg~-~~~~~s~P~~i~~~Gv~~i~ 280 (307)
T PRK06223 224 -SAYYAPAASIAEMVEAILKDKKRVLPCSAYLEGEYGV-KDVYVGVPVKLGKNGVEKII 280 (307)
T ss_pred -ChhHHHHHHHHHHHHHHHcCCCcEEEEEEEecCcCCC-CCeEEEeEEEEeCCeEEEEe
Confidence 44568888999999887654 344589999 899999999993 5555553
No 33
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-47 Score=352.79 Aligned_cols=259 Identities=22% Similarity=0.268 Sum_probs=215.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHh-cccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEE--eCChhhhcCCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--TTDAVEACTGV 82 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~-~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~--~~~~~~a~~~a 82 (300)
|||+|+||+|.||+++++.|.. .+... +++|+|+++ ..+++++|+.|.. ....+.. .++.+++++|+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~-----el~L~d~~~---~~~g~alDl~~~~--~~~~i~~~~~~d~~~~l~~~ 70 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGS-----ELSLYDIAP---VTPGVAVDLSHIP--TAVKIKGFSGEDPTPALEGA 70 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCcc-----EEEEEecCC---CCcceehhhhcCC--CCceEEEeCCCCHHHHcCCC
Confidence 5999999889999999998865 33322 899999863 3567889998742 1123332 34668999999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH----HHCCCCCCCcEEeeeh
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCLTR 158 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~----~~~~~~p~~~i~~~t~ 158 (300)
|+||+++|.+++++++|.+++..|++++++++++|++++| +++++++|||+|+||++++ ++ +++|++++.+.|.
T Consensus 71 DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~-~~ivivvsNP~D~~t~~~~~~~~~~-sg~p~~rvig~~~ 148 (312)
T PRK05086 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCP-KACIGIITNPVNTTVAIAAEVLKKA-GVYDKNKLFGVTT 148 (312)
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEccCchHHHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence 9999999999999999999999999999999999999997 6899999999999999988 66 7899999877778
Q ss_pred hhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHh
Q 022227 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (300)
Q Consensus 159 ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (300)
||++|+++.+|+++|+++++|+.++ |||||+ +|||+||++ +|.|+.+ ++ .+++.++++++|++|++
T Consensus 149 Lds~R~~~~ia~~l~~~~~~v~~~v-~GeHg~~s~~p~~S~~------~g~~l~~----~~--~~~i~~~v~~~g~~ii~ 215 (312)
T PRK05086 149 LDVIRSETFVAELKGKQPGEVEVPV-IGGHSGVTILPLLSQV------PGVSFTE----QE--VADLTKRIQNAGTEVVE 215 (312)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEE-EEecCCCceecccccc------CCccCCH----HH--HHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999875 999977 999999999 4777732 22 46899999999999999
Q ss_pred cC--CccccchHHHHHHHHHhhhhccC----------CCccccCCCCCeEEEEeEEE--CCeeeeeee
Q 022227 238 AR--KLSSALSAASSACDHIRDWVLGT----------PEVGSLLIFTPMIYTELVSW--LEPWTAIVG 291 (300)
Q Consensus 238 ~k--g~t~~~s~a~ai~~~~~~~~~~t----------~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~~ 291 (300)
+| +.++++++|.++++++++++.++ ...|+ |+ +|+|||+||++ ++.+..+.-
T Consensus 216 ~k~~~g~t~~~~a~a~~~~v~ai~~~~~~~~~v~~~~~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~~ 281 (312)
T PRK05086 216 AKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGD-GK-YARFFAQPVLLGKNGVEERLPI 281 (312)
T ss_pred cccCCCCchhhHHHHHHHHHHHHHhcCCCCCcEEEEEEEecc-CC-cceEEEEEEEEcCCeeEEEcCC
Confidence 88 23555699999999999988442 12254 74 68999999999 578887664
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=1.1e-44 Score=326.51 Aligned_cols=230 Identities=31% Similarity=0.418 Sum_probs=200.4
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChhhhcCCCcEEE
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNIAV 86 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~~a~~~aDvVi 86 (300)
|+|+||+|.+|+++++.|+..+.. ...+|+|+|+++ +++++.++|++|...+. ..+++.++|.+++++|||+||
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~---~~~el~L~D~~~--~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv 75 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVL---LAIELVLYDIDE--EKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVI 75 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCC---cceEEEEEeCCc--ccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEE
Confidence 689996699999999999988721 113899999974 78999999999987655 457777778899999999999
Q ss_pred EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhhHHHHHH
Q 022227 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166 (300)
Q Consensus 87 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~R~~~ 166 (300)
+++|.++++|++|.+++.+|+++++++++.++++|| ++++|++|||+|.+|++++++ +++|++|+.|.|.+|+.|+++
T Consensus 76 ~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p-~a~~i~~tNP~d~~t~~~~~~-sg~~~~kviG~~~ld~~r~~~ 153 (263)
T cd00650 76 ITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSP-DAWIIVVSNPVDIITYLVWRY-SGLPKEKVIGLGTLDPIRFRR 153 (263)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCcHHHHHHHHHHH-hCCCchhEEEeecchHHHHHH
Confidence 999999999999999999999999999999999996 799999999999999999998 699999975654499999999
Q ss_pred HHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHhcCCccccch
Q 022227 167 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALS 246 (300)
Q Consensus 167 ~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~t~~~s 246 (300)
++|+++++++++|+.+ |||+||++++|+||+++
T Consensus 154 ~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~---------------------------------------------- 186 (263)
T cd00650 154 ILAEKLGVDPDDVKVY-ILGEHGGSQVPDWSTVR---------------------------------------------- 186 (263)
T ss_pred HHHHHhCCCccceEEE-EEEcCCCceEeccccch----------------------------------------------
Confidence 9999999999999966 59999999999999866
Q ss_pred HHHHHHHHHhhhhc--------cCCCccccCCCCCeEEEEeEEE--CCeeeeeee
Q 022227 247 AASSACDHIRDWVL--------GTPEVGSLLIFTPMIYTELVSW--LEPWTAIVG 291 (300)
Q Consensus 247 ~a~ai~~~~~~~~~--------~t~~~g~ygi~~~v~~s~Pv~~--~~~~~~~~~ 291 (300)
+|.++++++++|+. +++.+|+||+|+|++||+||++ ++.|++++-
T Consensus 187 ~a~~~~~ii~ai~~~~~~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~ 241 (263)
T cd00650 187 IATSIADLIRSLLNDEGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV 241 (263)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC
Confidence 66677777777664 3455699999999999999999 477788874
No 35
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=7.2e-38 Score=273.08 Aligned_cols=260 Identities=26% Similarity=0.358 Sum_probs=209.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~~a~~~a 82 (300)
+..||+|.||+|-||+.+...|....+.+ ++.|||+. ...|.+.||+|..... ...+....+++.++++|
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs-----~LaLYDi~----~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~a 97 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIA----NTPGVAADLSHINTNSSVVGFTGADGLENALKGA 97 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccc-----eeeeeecc----cCCcccccccccCCCCceeccCChhHHHHHhcCC
Confidence 45799999999999999998888776655 89999996 3678999999987542 34444556789999999
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHC---CCCCCCcEEeeehh
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA---PSIPAKNITCLTRL 159 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~---~~~p~~~i~~~t~l 159 (300)
|+||+.||+||||||+|.||+..|+.|+++++.++.++|| ++.+.++|||+|...+++.+.. .-++++++.|.|.|
T Consensus 98 dvVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP-~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTtL 176 (345)
T KOG1494|consen 98 DVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCP-NALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTL 176 (345)
T ss_pred CEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCc-cceeEeecCcccccchHHHHHHHHcCCCCccceeceehh
Confidence 9999999999999999999999999999999999999997 6899999999997666655532 34677888899999
Q ss_pred hHHHHHHHHHHHcCCCCCC-eEEEEEecCCCC-ceeeeccceeeeccCCCcchhhhhcccccchhHHHHHHHhHHHHHHh
Q 022227 160 DHNRALGQISEKLNVQVSD-VKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (300)
Q Consensus 160 d~~R~~~~la~~l~v~~~~-V~~~~V~G~hg~-~~~p~~s~a~v~~~~~g~p~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (300)
|..|++.++++.++++|.+ ++ ++|+|.|.. |..|++|++... .. +++++ .+.|+.++|+.|.||++
T Consensus 177 DvVRA~tFv~~~~~~~p~~~v~-VPVIGGHaG~TIlPLlSQ~~p~--------~~-~~~~~--~~~Lt~RiQ~gGtEVV~ 244 (345)
T KOG1494|consen 177 DVVRANTFVAEVLNLDPAEDVD-VPVIGGHAGITIIPLLSQCKPP--------FR-FTDDE--IEALTHRIQNGGTEVVK 244 (345)
T ss_pred hhhhHHHHHHHHhCCCchhcCC-cceecCcCCceEeeecccCCCc--------cc-CCHHH--HHHHHHHHHhCCceEEE
Confidence 9999999999999999944 76 667899986 999999999871 01 22222 46899999999999999
Q ss_pred cCCc--cccchHHHHHHHHHhhhhc---cCCCc-------c-ccCCCCCeEEEEeEEE--CCeeee
Q 022227 238 ARKL--SSALSAASSACDHIRDWVL---GTPEV-------G-SLLIFTPMIYTELVSW--LEPWTA 288 (300)
Q Consensus 238 ~kg~--t~~~s~a~ai~~~~~~~~~---~t~~~-------g-~ygi~~~v~~s~Pv~~--~~~~~~ 288 (300)
.|.. |..+|+|+|-++...+++. |.... . .+++| ||+.|+.+ +++=..
T Consensus 245 AKaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~~~~~~---fFaspv~Lg~~Gv~~v 307 (345)
T KOG1494|consen 245 AKAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASPVTELP---FFATPVTLGKKGVEEV 307 (345)
T ss_pred eccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEeccccCcc---ceeceEEecCCceeee
Confidence 9864 5567999998888776553 32111 1 14555 99999999 454443
No 36
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=100.00 E-value=2.8e-32 Score=223.24 Aligned_cols=141 Identities=28% Similarity=0.494 Sum_probs=128.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+||+|.||+++++.|+++++.+ ||+|+|++ +++++|+++||+|+..+...+..++.+.+++++|||+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~-----ei~L~D~~--~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLAD-----EIVLIDIN--EDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSS-----EEEEEESS--HHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----ceEEeccC--cccceeeehhhhhhhhhcccccccccccccccccccEE
Confidence 599999977999999999999998866 89999997 46899999999999877656667777889999999999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEe
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC 155 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~ 155 (300)
|++||.++++|++|.+++..|+++++++++.+++++| +++++++|||+|++|++++++ +++|++++.|
T Consensus 74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p-~~~vivvtNPvd~~t~~~~~~-s~~~~~kviG 141 (141)
T PF00056_consen 74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAP-DAIVIVVTNPVDVMTYVAQKY-SGFPPNKVIG 141 (141)
T ss_dssp EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHST-TSEEEE-SSSHHHHHHHHHHH-HTSSGGGEEE
T ss_pred EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCC-ccEEEEeCCcHHHHHHHHHHh-hCcCcccCcC
Confidence 9999999999999999999999999999999999997 789999999999999999998 7999888643
No 37
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=99.95 E-value=6.2e-28 Score=204.51 Aligned_cols=129 Identities=28% Similarity=0.250 Sum_probs=113.8
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchhhhhcc----cccchhHHHHHHHhHH
Q 022227 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRG 232 (300)
Q Consensus 157 t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~~~~~~----~~~~~~~~~~~v~~~~ 232 (300)
|.||++|+++++|+++|++|.+++.++ |||||++|||+||++++ +|+|+.++.+. .+|..+++.++++++|
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~V-iGeHg~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g 75 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAYV-IGEHGDSQVPDWSHAKV----GGVPLLSYAKPSGKLSEEELEELTERVRKAG 75 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEEE-EBSSSTTEEEEGGGEEE----TTEEHHHHHHTTTSSSHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEEE-EecCCcceeeeeecccc----cccccccccccccchhHHhhhccccccEecc
Confidence 689999999999999999999999875 99999999999999999 99999877543 2455689999999999
Q ss_pred HHHHhcCCccccchHHHHHHHHHhhhhcc--------CCCccccCCCCC-eEEEEeEEE--CCeeeeee
Q 022227 233 AAIIKARKLSSALSAASSACDHIRDWVLG--------TPEVGSLLIFTP-MIYTELVSW--LEPWTAIV 290 (300)
Q Consensus 233 ~~i~~~kg~t~~~s~a~ai~~~~~~~~~~--------t~~~g~ygi~~~-v~~s~Pv~~--~~~~~~~~ 290 (300)
++|+++|+.++++|+|.|+++++++|+.+ +...|+||++.+ +|||+||++ ++.|..+.
T Consensus 76 ~~ii~~k~g~t~~s~A~a~~~~v~ail~~~~~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~ 144 (174)
T PF02866_consen 76 YEIIKAKGGSTSYSIAAAAARIVEAILKDERRILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVE 144 (174)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHHHHTTHTEEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEEC
T ss_pred ceeeeeccccCcCCHHHHHHHHHHHHhhcccccccceeccccccCcccccceecceEEEcCCeeEEEeC
Confidence 99999996566679999999999998754 344599999977 999999999 68898876
No 38
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.92 E-value=3.4e-24 Score=204.24 Aligned_cols=187 Identities=17% Similarity=0.176 Sum_probs=137.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCC-CCC-eEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChhhhcC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGT-DQP-VILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEACT 80 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~-~~~-~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~~a~~ 80 (300)
+||+|||| |+. ..+.|+..-+..+ +.+ .+|+|+|+++ ++++- ...+..... ....+++.|+|.++|++
T Consensus 1 ~KI~iIGg-GS~---~tp~li~~l~~~~~~l~~~ei~L~Did~--~Rl~~-v~~l~~~~~~~~g~~~~v~~ttD~~~Al~ 73 (425)
T cd05197 1 VKIAIIGG-GSS---FTPELVSGLLKTPEELPISEVTLYDIDE--ERLDI-ILTIAKRYVEEVGADIKFEKTMDLEDAII 73 (425)
T ss_pred CEEEEECC-chH---hHHHHHHHHHcChhhCCCCEEEEEcCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEeCCHHHHhC
Confidence 59999995 543 4444443211111 122 3899999974 55542 222222111 12347888999999999
Q ss_pred CCcEEEEeCCC---C---------CCCCC---c-----HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH
Q 022227 81 GVNIAVMVGGF---P---------RKEGM---E-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (300)
Q Consensus 81 ~aDvVi~~ag~---~---------~~~g~---~-----r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~ 140 (300)
||||||.+.-+ . .+.|. + -.-...+|+++++++++.|+++|| ++|+|++|||+|++|++
T Consensus 74 gADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P-~a~lin~TNP~di~t~a 152 (425)
T cd05197 74 DADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSP-DAWYLNFTNPAGEVTEA 152 (425)
T ss_pred CCCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCC-CcEEEecCChHHHHHHH
Confidence 99999997532 1 12211 1 122356899999999999999997 79999999999999999
Q ss_pred HHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEec-CCCCceeeeccceeeeccCCCcchhhh
Q 022227 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVREL 213 (300)
Q Consensus 141 ~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G-~hg~~~~p~~s~a~v~~~~~g~p~~~~ 213 (300)
+++. + |+.++.|.|.. +.|+++.+|+.+|+++++|+.++ +| ||| ++||++++ +|+|+..-
T Consensus 153 ~~~~-~--p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v-~GlnHg----~~~s~~~~----~G~~l~p~ 213 (425)
T cd05197 153 VRRY-V--PPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQY-AGLNHG----IWLNRVRY----NGGDVTPK 213 (425)
T ss_pred HHHh-C--CCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEE-EeccCe----EeeEeEEE----CCeecHHH
Confidence 9987 2 66788787776 99999999999999999999886 89 999 99999999 88887643
No 39
>PRK15076 alpha-galactosidase; Provisional
Probab=99.89 E-value=4.6e-22 Score=190.23 Aligned_cols=176 Identities=16% Similarity=0.162 Sum_probs=135.5
Q ss_pred cEEEEEcCCChHHHHHHH--HHH-hcccCCCCCCeEEEEEecCCchhhhh-hhhhhhhhhccC--CcccEEEeCChhhhc
Q 022227 6 VRVLVTGAAGQIGYALVP--MIA-RGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFP--LLKGVVATTDAVEAC 79 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~--~L~-~~~~~~~~~~~~l~L~D~~~~~~~l~-g~~~dl~~~~~~--~~~~v~~~~~~~~a~ 79 (300)
+||+|+| +|++|++.+. .++ ..++.+ .+|+|+|+++ ++++ +..+ +.+.... ...+++.++|.++|+
T Consensus 2 ~KIaIIG-aGsvg~~~~~~~~i~~~~~l~~----~evvLvDid~--er~~~~~~l-~~~~~~~~~~~~~i~~ttD~~eal 73 (431)
T PRK15076 2 PKITFIG-AGSTVFTKNLLGDILSVPALRD----AEIALMDIDP--ERLEESEIV-ARKLAESLGASAKITATTDRREAL 73 (431)
T ss_pred cEEEEEC-CCHHHhHHHHHHHHhhCccCCC----CEEEEECCCH--HHHHHHHHH-HHHHHHhcCCCeEEEEECCHHHHh
Confidence 6999999 6999988776 555 233321 2899999974 5665 4444 4444322 235777788989999
Q ss_pred CCCcEEEEeCCCC-CCCC--------------CcHHHH--------HHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh
Q 022227 80 TGVNIAVMVGGFP-RKEG--------------MERKDV--------MSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (300)
Q Consensus 80 ~~aDvVi~~ag~~-~~~g--------------~~r~dl--------~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~ 136 (300)
+|||+||++++++ ++++ ++|.+. +.+|+++++++++.|+++|| ++|+|++|||+|+
T Consensus 74 ~dADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p-~a~iin~tNP~di 152 (431)
T PRK15076 74 QGADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCP-DALLLNYVNPMAM 152 (431)
T ss_pred CCCCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCC-CeEEEEcCChHHH
Confidence 9999999999887 4444 456677 89999999999999999997 7999999999999
Q ss_pred HHHHHHHHCCCCCCCcEEee--ehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceee
Q 022227 137 NALILKEFAPSIPAKNITCL--TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 201 (300)
Q Consensus 137 ~~~~~~~~~~~~p~~~i~~~--t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v 201 (300)
+|+.+++ +|+.++.|. +.+|+. +.+|+.+|+++++|+.++ .| -+++.++.+.+.
T Consensus 153 vt~~~~~----~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~-~G---lNH~~W~~~~~~ 208 (431)
T PRK15076 153 NTWAMNR----YPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRC-AG---INHMAWYLELER 208 (431)
T ss_pred HHHHHhc----CCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEE-Ee---ecchhhheeeeE
Confidence 9999873 466676555 677774 789999999999999875 78 344677777776
No 40
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.88 E-value=6.7e-22 Score=188.24 Aligned_cols=180 Identities=20% Similarity=0.169 Sum_probs=133.0
Q ss_pred cEEEEEcCCChHHH-HHHHHHHhcccCCCCCC-eEEEEEecCCchhhhhhhhhhhhhhccC--CcccEEEeCChhhhcCC
Q 022227 6 VRVLVTGAAGQIGY-ALVPMIARGVMLGTDQP-VILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTG 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~-~la~~L~~~~~~~~~~~-~~l~L~D~~~~~~~l~g~~~dl~~~~~~--~~~~v~~~~~~~~a~~~ 81 (300)
+||+|||| |++-. .+...|+... +..+ .+|+|+|+++ +++++....-....... ...+++.++|..+|++|
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~---~~l~~~ei~L~Did~-~~rl~~v~~~~~~~~~~~~~~~~v~~t~d~~~al~g 75 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRY---EELPVTELVLVDIDE-EEKLEIVGALAKRMVKKAGLPIKVHLTTDRREALEG 75 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhcc---ccCCCCEEEEecCCh-HHHHHHHHHHHHHHHHhhCCCeEEEEeCCHHHHhCC
Confidence 59999995 55422 1333334321 1112 3899999983 46665432222222111 23478889999999999
Q ss_pred CcEEEEeCCCCCCCCCcHHHH--------------------HHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 82 VNIAVMVGGFPRKEGMERKDV--------------------MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 82 aDvVi~~ag~~~~~g~~r~dl--------------------~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
||+||.++++...+++++.+. ..+|+++++++++.|+++|| ++|+|++|||++++|+++
T Consensus 76 adfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~P-da~lin~TNP~~ivt~a~ 154 (419)
T cd05296 76 ADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAP-DAWLINFTNPAGIVTEAV 154 (419)
T ss_pred CCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCC-CeEEEEecCHHHHHHHHH
Confidence 999999998877665555442 57899999999999999997 799999999999999999
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEec-CCCCceeeeccceee
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATV 201 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G-~hg~~~~p~~s~a~v 201 (300)
++. + +.++.|.|..+ .|+++.+|+.+|+++++|+.++ +| || +-++.+.+.
T Consensus 155 ~k~-~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v-~GlNH----~~w~~~~~~ 205 (419)
T cd05296 155 LRH-T---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDY-AGLNH----LGWLRRVLL 205 (419)
T ss_pred HHh-c---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEE-Eeccc----ceeeeeeeE
Confidence 987 3 45777778774 7999999999999999999875 79 88 456666666
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.86 E-value=9.8e-20 Score=174.05 Aligned_cols=180 Identities=19% Similarity=0.232 Sum_probs=127.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCC-CCCC-eEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChhhhcC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLG-TDQP-VILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEACT 80 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~-~~~~-~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~~a~~ 80 (300)
|||+|||| |+. .++.|+..-+.. +..+ .+|+|+|+++ ++++- ...+..... ....+++.|+|..+|++
T Consensus 1 ~KI~iIGa-GS~---~tp~li~~l~~~~~~l~~~ei~L~DId~--~rl~~-v~~l~~~~~~~~g~~~~v~~Ttdr~eAl~ 73 (437)
T cd05298 1 FKIVIAGG-GST---YTPGIVKSLLDRKEDFPLRELVLYDIDA--ERQEK-VAEAVKILFKENYPEIKFVYTTDPEEAFT 73 (437)
T ss_pred CeEEEECC-cHH---HHHHHHHHHHhCcccCCCCEEEEECCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEECCHHHHhC
Confidence 59999995 543 444443321111 1122 3899999974 56653 223322211 12347888999999999
Q ss_pred CCcEEEEeCCC---C---------CCCCC---c-----HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH
Q 022227 81 GVNIAVMVGGF---P---------RKEGM---E-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (300)
Q Consensus 81 ~aDvVi~~ag~---~---------~~~g~---~-----r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~ 140 (300)
||||||.+.-+ . .+.|. + -.-...+|+++++++++.|+++|| ++|+|++|||++++|++
T Consensus 74 gADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~p-da~lin~tNP~~~vt~~ 152 (437)
T cd05298 74 DADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSP-DAWILNYSNPAAIVAEA 152 (437)
T ss_pred CCCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCC-CeEEEEecCcHHHHHHH
Confidence 99999997532 1 12221 1 122357999999999999999997 79999999999999999
Q ss_pred HHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeeccceee
Q 022227 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 201 (300)
Q Consensus 141 ~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s~a~v 201 (300)
+++. +|..++.|.|+--. -++..+|+.+|+++++|+..+ .| -+++.++.+.+.
T Consensus 153 ~~~~---~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~-~G---lNH~~w~~~~~~ 205 (437)
T cd05298 153 LRRL---FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDY-FG---LNHFGWFTKIYD 205 (437)
T ss_pred HHHH---CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEE-Ee---ecchhhhhheEE
Confidence 9886 56678999998765 578889999999999998664 67 333566666666
No 42
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.83 E-value=2.8e-19 Score=171.19 Aligned_cols=178 Identities=18% Similarity=0.175 Sum_probs=138.4
Q ss_pred cEEEEEcCCChHHHHHHH--HHHhc-ccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC--CcccEEEeCChhhhcC
Q 022227 6 VRVLVTGAAGQIGYALVP--MIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACT 80 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~--~L~~~-~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~--~~~~v~~~~~~~~a~~ 80 (300)
+||+|+| +|.+|++++. .++.. .+.+ .+|+|+|+++ ++++....++.+.... ...++..++|.+++++
T Consensus 1 ~KIaIIG-aGs~G~a~a~~~~i~~~~~~~g----~eV~L~Did~--e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~eal~ 73 (423)
T cd05297 1 IKIAFIG-AGSVVFTKNLVGDLLKTPELSG----STIALMDIDE--ERLETVEILAKKIVEELGAPLKIEATTDRREALD 73 (423)
T ss_pred CeEEEEC-CChHHhHHHHHHHHhcCCCCCC----CEEEEECCCH--HHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhc
Confidence 4899999 6999998776 45433 2211 2899999974 6777666666554322 2357778889999999
Q ss_pred CCcEEEEeCCCCCCCCCcH----------------------HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH
Q 022227 81 GVNIAVMVGGFPRKEGMER----------------------KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~g~~r----------------------~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~ 138 (300)
|||+||.+++....++.++ .....+|++++.++++.++++|| +++++++|||++++|
T Consensus 74 ~AD~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p-~a~~i~~tNPv~i~t 152 (423)
T cd05297 74 GADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCP-DAWLLNYANPMAELT 152 (423)
T ss_pred CCCEEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCC-CCEEEEcCChHHHHH
Confidence 9999999987655444433 33467899999999999999998 799999999999999
Q ss_pred HHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEec-CCCCceeeeccceee
Q 022227 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATV 201 (300)
Q Consensus 139 ~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G-~hg~~~~p~~s~a~v 201 (300)
+++++. ++ .++.|.|.. +.++++.+|+.+|+++++|+.++ +| || +.++.+.+.
T Consensus 153 ~~~~k~-~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~-~GlNH----~~w~~~~~~ 206 (423)
T cd05297 153 WALNRY-TP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQV-AGINH----MAWLLKFEY 206 (423)
T ss_pred HHHHHh-CC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEE-Eeecc----HhhhhhheE
Confidence 999998 34 466566654 77899999999999999999886 78 55 667777776
No 43
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.71 E-value=1.9e-16 Score=133.87 Aligned_cols=156 Identities=21% Similarity=0.235 Sum_probs=104.3
Q ss_pred EEEEEcCCChHHHHH-HHH-HHhcccCCCCCCeEEEEEecCCchhhhhhh---hhhhhhhccCCcccEEEeCChhhhcCC
Q 022227 7 RVLVTGAAGQIGYAL-VPM-IARGVMLGTDQPVILHMLDIPPAAEALNGV---KMELVDAAFPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 7 kV~IiGAaG~vG~~l-a~~-L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~---~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (300)
||+||| +|++-+.. ... +....-+ ...+++|+|+++ ++|+.. +..+.... ....+++.++|.++|++|
T Consensus 1 KI~iIG-aGS~~~~~~l~~~l~~~~~l---~~~ei~L~Did~--~RL~~~~~~~~~~~~~~-~~~~~v~~ttd~~eAl~g 73 (183)
T PF02056_consen 1 KITIIG-AGSTYFPLLLLGDLLRTEEL---SGSEIVLMDIDE--ERLEIVERLARRMVEEA-GADLKVEATTDRREALEG 73 (183)
T ss_dssp EEEEET-TTSCCHHHHHHHHHHCTTTS---TEEEEEEE-SCH--HHHHHHHHHHHHHHHHC-TTSSEEEEESSHHHHHTT
T ss_pred CEEEEC-CchHhhHHHHHHHHhcCccC---CCcEEEEEcCCH--HHHHHHHHHHHHHHHhc-CCCeEEEEeCCHHHHhCC
Confidence 899999 47655442 222 2222211 123899999974 677632 11222211 223578889999999999
Q ss_pred CcEEEEeCCC------------CCCCCCcH----------HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH
Q 022227 82 VNIAVMVGGF------------PRKEGMER----------KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL 139 (300)
Q Consensus 82 aDvVi~~ag~------------~~~~g~~r----------~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~ 139 (300)
||+||.+..+ |.+.|... .-...++++.+.++++.|+++|| ++|+|++|||+..+|.
T Consensus 74 ADfVi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~P-dAw~iNytNP~~~vt~ 152 (183)
T PF02056_consen 74 ADFVINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCP-DAWLINYTNPMGIVTE 152 (183)
T ss_dssp ESEEEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTT-TSEEEE-SSSHHHHHH
T ss_pred CCEEEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCC-CcEEEeccChHHHHHH
Confidence 9999998643 33433211 23356899999999999999997 8999999999999999
Q ss_pred HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCC
Q 022227 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (300)
Q Consensus 140 ~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v 174 (300)
.+.+.. |..++.|.|+... -+...+|+.||.
T Consensus 153 a~~r~~---~~~k~vGlCh~~~-~~~~~la~~L~~ 183 (183)
T PF02056_consen 153 ALSRYT---PKIKVVGLCHGPQ-GTRRQLAKLLGM 183 (183)
T ss_dssp HHHHHS---TTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred HHHHhC---CCCCEEEECCCHH-HHHHHHHHHhCc
Confidence 999874 4357889998754 567788888773
No 44
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.71 E-value=9.9e-17 Score=150.81 Aligned_cols=183 Identities=20% Similarity=0.208 Sum_probs=126.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCC-CCCCe-EEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChhh
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLG-TDQPV-ILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVE 77 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~-~~~~~-~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~~ 77 (300)
|+..||+|||| |+++.. .++.+.+.. +..+. ++.|+|+++ ++++ ...++.+... -...+++.++|.++
T Consensus 1 m~~~KI~iIGg-GSt~tp---~~v~g~l~~~e~l~~~el~L~Did~--~r~~-~i~~~~~~~v~~~g~~~kv~~ttd~~e 73 (442)
T COG1486 1 MKKFKIVIIGG-GSTYTP---KLLLGDLARTEELPVRELALYDIDE--ERLK-IIAILAKKLVEEAGAPVKVEATTDRRE 73 (442)
T ss_pred CCcceEEEECC-CccccH---HHHHHHHhcCccCCcceEEEEeCCH--HHHH-HHHHHHHHHHHhhCCCeEEEEecCHHH
Confidence 35679999995 655443 333332221 22233 899999974 5655 2233332211 12257888999999
Q ss_pred hcCCCcEEEEeCCC------------CCCCCCcHH--------HHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhH
Q 022227 78 ACTGVNIAVMVGGF------------PRKEGMERK--------DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN 137 (300)
Q Consensus 78 a~~~aDvVi~~ag~------------~~~~g~~r~--------dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~ 137 (300)
||+|||||+.+.-+ |.|.|.-+. -.-.++++++.+|++.|+++|| +||+|++|||+..+
T Consensus 74 Al~gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P-~Aw~lNytNP~~~v 152 (442)
T COG1486 74 ALEGADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCP-NAWMLNYTNPAAIV 152 (442)
T ss_pred HhcCCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCC-CceEEeccChHHHH
Confidence 99999999997522 222221111 1235899999999999999996 89999999999999
Q ss_pred HHHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCC-CCeEEEEEecCCCCceeeeccceee
Q 022227 138 ALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQV-SDVKNVIIWGNHSSSQYPDVNHATV 201 (300)
Q Consensus 138 ~~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~-~~V~~~~V~G~hg~~~~p~~s~a~v 201 (300)
|+++.++. |.-++.|.|+... -....+|+.||+++ .+++.- +.| -+++.+|..++.
T Consensus 153 TeAv~r~~---~~~K~VGlCh~~~-g~~~~lAe~L~~~~~~~l~~~-~aG---lNH~~w~~~~~~ 209 (442)
T COG1486 153 TEAVRRLY---PKIKIVGLCHGPI-GIAMELAEVLGLEPREDLRYR-VAG---LNHMVWILRVRD 209 (442)
T ss_pred HHHHHHhC---CCCcEEeeCCchH-HHHHHHHHHhCCCchhceeEE-Eee---chhhhhhhHhhh
Confidence 99999973 4237889998743 56888999999975 999854 477 334566666666
No 45
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.35 E-value=9.6e-12 Score=113.60 Aligned_cols=173 Identities=14% Similarity=0.119 Sum_probs=112.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEE-EecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhhc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHM-LDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L-~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a~ 79 (300)
..++|+||||+||||++++..|+++|+ +|+- +..++++++ ..+..+|...... ...++.-...+.+|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-------~V~gtVR~~~~~k~-~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-------TVRGTVRDPEDEKK-TEHLRKLEGAKERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-------EEEEEEcCcchhhh-HHHHHhcccCcccceEEeccccccchHHHHH
Confidence 568999999999999999999999998 3333 322222221 1133344322211 123444455788999
Q ss_pred CCCcEEEEeCCCCCCCCC-cHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCC--CCC------
Q 022227 80 TGVNIAVMVGGFPRKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS--IPA------ 150 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~g~-~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~--~p~------ 150 (300)
++||.|||+|.+...... ...+++..+++.+.++.++++++. .++.+|+|++...+.+-.....++ ++.
T Consensus 77 ~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~ 154 (327)
T KOG1502|consen 77 DGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDL 154 (327)
T ss_pred hCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEeccHHHhccCCcCCCCCcccccccCCcH
Confidence 999999999987654333 345789999999999999999985 588899998876443210000000 000
Q ss_pred ------CcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEec
Q 022227 151 ------KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (300)
Q Consensus 151 ------~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G 186 (300)
+..|..++.-.++....+|++-+++...|....|+|
T Consensus 155 ~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~G 196 (327)
T KOG1502|consen 155 DFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFG 196 (327)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceEC
Confidence 113455666667777888888887777666555555
No 46
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.14 E-value=3.6e-10 Score=105.72 Aligned_cols=175 Identities=15% Similarity=0.139 Sum_probs=108.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCch--hhhhhhhhhhhhhccC----CcccEEEeCChhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFP----LLKGVVATTDAVE 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~--~~l~g~~~dl~~~~~~----~~~~v~~~~~~~~ 77 (300)
+++||.||||+||+|++++..|+..+. +|+.+|..... ..+............. ...++.-...+.+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~ 86 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQ-------TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK 86 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence 457999999999999999999998874 78888874210 0010000000000000 0011111113345
Q ss_pred hcCCCcEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH----HHHHCCCCCCC
Q 022227 78 ACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEFAPSIPAK 151 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~----~~~~~~~~p~~ 151 (300)
.++++|+|||+|+....+ ..+..+....|+....++.+.+++.+.+ ++|++|.. .+.... ..+..+ ..+.
T Consensus 87 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~--~~v~~SS~-~vyg~~~~~~~~e~~~-~~p~ 162 (348)
T PRK15181 87 ACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS--SFTYAASS-STYGDHPDLPKIEERI-GRPL 162 (348)
T ss_pred HhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEeech-HhhCCCCCCCCCCCCC-CCCC
Confidence 578999999999864322 2344567889999999999999887432 46666542 211000 001001 1123
Q ss_pred cEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 152 ~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
..++.+++..+++...+++..+++...++...|+|.+.
T Consensus 163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 46888888888887777888899999999999999764
No 47
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.08 E-value=2.5e-10 Score=103.84 Aligned_cols=116 Identities=20% Similarity=0.245 Sum_probs=81.1
Q ss_pred EEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc--CCcccEEEeCChhhhcCCCcEEE
Q 022227 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTGVNIAV 86 (300)
Q Consensus 9 ~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~--~~~~~v~~~~~~~~a~~~aDvVi 86 (300)
+||||+||+|++++..|++.|.. .+|+.+|+.+....+. ++..... ....+++-..+..++++++|+||
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~-----~~Vr~~d~~~~~~~~~----~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~ 71 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYI-----YEVRVLDRSPPPKFLK----DLQKSGVKEYIQGDITDPESLEEALEGVDVVF 71 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCc-----eEEEEcccccccccch----hhhcccceeEEEeccccHHHHHHHhcCCceEE
Confidence 48999999999999999998731 2789999865322111 1111110 11234444457889999999999
Q ss_pred EeCCCCCCCC-CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh
Q 022227 87 MVGGFPRKEG-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (300)
Q Consensus 87 ~~ag~~~~~g-~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~ 136 (300)
|+|+.....+ .++..+...|+..++++++++.+. +++.+|+|+++.+
T Consensus 72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~---~VkrlVytSS~~v 119 (280)
T PF01073_consen 72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA---GVKRLVYTSSISV 119 (280)
T ss_pred EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcCcce
Confidence 9998654334 456778899999999999999986 3566777666543
No 48
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.07 E-value=2e-09 Score=103.88 Aligned_cols=170 Identities=13% Similarity=0.050 Sum_probs=107.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
.++|||.||||+||||++++..|+.+|. +|+.+|.... .... ....+.. . +. ..+...+-...++.++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~-------~V~~ldr~~~-~~~~-~~~~~~~-~-~~-~~~~~~Di~~~~~~~~ 185 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGD-------EVIVIDNFFT-GRKE-NLVHLFG-N-PR-FELIRHDVVEPILLEV 185 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCC-ccHh-Hhhhhcc-C-Cc-eEEEECccccccccCC
Confidence 3568999999999999999999998875 7889986421 1100 0001100 0 00 0111112223457789
Q ss_pred cEEEEeCCCCC--CCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----HHHHHC----CCCCCCc
Q 022227 83 NIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFA----PSIPAKN 152 (300)
Q Consensus 83 DvVi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----~~~~~~----~~~p~~~ 152 (300)
|+|||+|+... ....+..+.+..|+....++++++++.+ +++|++|+.. +... ...+.. ....+..
T Consensus 186 D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g---~r~V~~SS~~-VYg~~~~~p~~E~~~~~~~p~~p~s 261 (436)
T PLN02166 186 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---ARFLLTSTSE-VYGDPLEHPQKETYWGNVNPIGERS 261 (436)
T ss_pred CEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECcHH-HhCCCCCCCCCccccccCCCCCCCC
Confidence 99999997532 2223556778899999999999999874 3667666532 1100 000000 0011233
Q ss_pred EEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 153 ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 153 i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
.++.+++..+++...+++..+++..-++...|+|.+
T Consensus 262 ~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 262 CYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPR 297 (436)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCC
Confidence 577888888888777788889998888888889965
No 49
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.03 E-value=1.5e-09 Score=97.37 Aligned_cols=160 Identities=19% Similarity=0.137 Sum_probs=113.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCc--hhhhhhh-----hhhhhhhccCCcccEEEeCChhhh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--AEALNGV-----KMELVDAAFPLLKGVVATTDAVEA 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~--~~~l~g~-----~~dl~~~~~~~~~~v~~~~~~~~a 78 (300)
|+|.|+||+|+||||.+..|++.|+ +++.+|...+ .+.+... ..|+.|.. -+.+.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-------~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~-----------~L~~v 62 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH-------EVVVLDNLSNGHKIALLKLQFKFYEGDLLDRA-----------LLTAV 62 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC-------eEEEEecCCCCCHHHhhhccCceEEeccccHH-----------HHHHH
Confidence 5899999999999999999999876 8999997432 1212111 12333222 12233
Q ss_pred cC--CCcEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH-----HHHHHHCCCCC
Q 022227 79 CT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-----LILKEFAPSIP 149 (300)
Q Consensus 79 ~~--~aDvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~-----~~~~~~~~~~p 149 (300)
|+ ..|.|||.||...-. -+....+...|+-.+..+.++|.+++. +-+|+|+++.+-. ++ .+.. ...
T Consensus 63 f~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv---~~~vFSStAavYG~p~~~PI-~E~~-~~~ 137 (329)
T COG1087 63 FEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGV---KKFIFSSTAAVYGEPTTSPI-SETS-PLA 137 (329)
T ss_pred HHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCC---CEEEEecchhhcCCCCCccc-CCCC-CCC
Confidence 32 689999999875422 134678899999999999999999964 4567776664211 11 1110 112
Q ss_pred CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
+.+-+|-|+|-.+++.+.+++..+.+..-+|.+++.|-|
T Consensus 138 p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 138 PINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred CCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCC
Confidence 346789999999999999999999999999999999877
No 50
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.00 E-value=5.3e-09 Score=101.07 Aligned_cols=170 Identities=14% Similarity=0.028 Sum_probs=105.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+.|||.||||+||||++++..|+++|. +|+.+|.... .+ .....+. ...+. .++...+-...++.++|
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-------~V~~ld~~~~-~~-~~~~~~~--~~~~~-~~~i~~D~~~~~l~~~D 185 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGD-------SVIVVDNFFT-GR-KENVMHH--FSNPN-FELIRHDVVEPILLEVD 185 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcC-------EEEEEeCCCc-cc-hhhhhhh--ccCCc-eEEEECCccChhhcCCC
Confidence 458999999999999999999998875 6888875321 11 1011110 00000 01111112334567899
Q ss_pred EEEEeCCCCC--CCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH---HHHHHCC-C-CC--CCcEE
Q 022227 84 IAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL---ILKEFAP-S-IP--AKNIT 154 (300)
Q Consensus 84 vVi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~---~~~~~~~-~-~p--~~~i~ 154 (300)
+|||+|+... ....+..+.+..|+....++++++++.+ +++|++|+..-.-.. ...+... . .| +...+
T Consensus 186 ~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g---~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y 262 (442)
T PLN02206 186 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY 262 (442)
T ss_pred EEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECChHHhCCCCCCCCCccccccCCCCCccchH
Confidence 9999997643 1223456778899999999999998874 367766653210000 0000000 0 01 12356
Q ss_pred eeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 155 ~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
+.++...+++...+.+..+++..-++...|+|.+
T Consensus 263 ~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 263 DEGKRTAETLTMDYHRGANVEVRIARIFNTYGPR 296 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 7788887777777777789988888888889975
No 51
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.00 E-value=2.3e-09 Score=101.26 Aligned_cols=172 Identities=14% Similarity=0.137 Sum_probs=105.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
.+.|||+|+||+||||++++..|...|+ +|+.+|...+ ..+.... +.. . ....++.-.....++++++
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~-------~V~~v~r~~~-~~~~~~~--~~~-~-~~~~Dl~d~~~~~~~~~~~ 86 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGH-------YIIASDWKKN-EHMSEDM--FCH-E-FHLVDLRVMENCLKVTKGV 86 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCC-------EEEEEEeccc-ccccccc--ccc-e-EEECCCCCHHHHHHHHhCC
Confidence 3568999999999999999999998775 7888886431 1111000 000 0 0001111111234557899
Q ss_pred cEEEEeCCCCCCCC---CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH--------HHHHCC-CCCC
Q 022227 83 NIAVMVGGFPRKEG---MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI--------LKEFAP-SIPA 150 (300)
Q Consensus 83 DvVi~~ag~~~~~g---~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~--------~~~~~~-~~p~ 150 (300)
|+|||+|+.....+ .+.......|+....++++.+++...+ ++|.+|+..- .... ..+..+ ...+
T Consensus 87 D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk--~~V~~SS~~v-Yg~~~~~~~~~~~~E~~~~p~~p 163 (370)
T PLN02695 87 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVK--RFFYASSACI-YPEFKQLETNVSLKESDAWPAEP 163 (370)
T ss_pred CEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCC--EEEEeCchhh-cCCccccCcCCCcCcccCCCCCC
Confidence 99999987532111 122335678999999999999887532 5666665321 0000 011000 1223
Q ss_pred CcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 151 ~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
...++.++...+++...+++..|++..-++...|+|.++
T Consensus 164 ~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 164 QDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 346777888888877777888899999999988999875
No 52
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.00 E-value=4.3e-09 Score=97.84 Aligned_cols=176 Identities=11% Similarity=0.106 Sum_probs=105.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhh--hhhhhh-ccC-CcccEEEeCChhhhc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK--MELVDA-AFP-LLKGVVATTDAVEAC 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~--~dl~~~-~~~-~~~~v~~~~~~~~a~ 79 (300)
..+||.||||+||+|++++..|++.|. +|++++++.. ...... ..+... ... ...++.-..+..+.+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 78 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGY-------AVNTTVRDPE--NQKKIAHLRALQELGDLKIFGADLTDEESFEAPI 78 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCC-------EEEEEECCCC--CHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHH
Confidence 457899999999999999999998774 6766655421 111000 001000 000 011111112345668
Q ss_pred CCCcEEEEeCCCCCCCCCcH-HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH-------HHHHH-------
Q 022227 80 TGVNIAVMVGGFPRKEGMER-KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL-------ILKEF------- 144 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~g~~r-~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~-------~~~~~------- 144 (300)
+++|+|||+|+.......+. .++...|+....++++.+.+.... .++|++|+-...-.. ...+.
T Consensus 79 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~-~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~ 157 (338)
T PLN00198 79 AGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSV-KRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEF 157 (338)
T ss_pred hcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEeecceeeeccCCCCCCceeccccCCchhh
Confidence 89999999998543222222 346688999999999999876421 256665543211000 00000
Q ss_pred -CCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 145 -APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 145 -~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
....++...++.+++..+++...+++..|++..-++...|+|..-
T Consensus 158 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~ 203 (338)
T PLN00198 158 LTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSL 203 (338)
T ss_pred hhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCc
Confidence 001123345778888888888888888899999999888999753
No 53
>PLN02650 dihydroflavonol-4-reductase
Probab=98.99 E-value=2.7e-09 Score=99.71 Aligned_cols=178 Identities=15% Similarity=0.122 Sum_probs=108.6
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-----cC-CcccEEEeCC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-----FP-LLKGVVATTD 74 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-----~~-~~~~v~~~~~ 74 (300)
|-...++|.||||+||||++++..|+..|. +|++++.+. +.+... .++.... .. ...++.-...
T Consensus 1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~-------~V~~~~r~~--~~~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~ 70 (351)
T PLN02650 1 MGSQKETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRDP--ANVKKV-KHLLDLPGATTRLTLWKADLAVEGS 70 (351)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHCCC-------EEEEEEcCc--chhHHH-HHHHhccCCCCceEEEEecCCChhh
Confidence 555678999999999999999999998775 677776643 222111 1111100 00 0112222224
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCc-HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH-----HHHHHHCCC-
Q 022227 75 AVEACTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-----LILKEFAPS- 147 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~~g~~-r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~-----~~~~~~~~~- 147 (300)
..++++++|+|||+|+.......+ ..+.+..|+..+.++++.+.+.+. -.++|++|.....-. ....+....
T Consensus 71 ~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~ 149 (351)
T PLN02650 71 FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKT-VRRIVFTSSAGTVNVEEHQKPVYDEDCWSD 149 (351)
T ss_pred HHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCC-ceEEEEecchhhcccCCCCCCccCcccCCc
Confidence 556788999999999764322222 235678899999999999988642 125666654321100 000000000
Q ss_pred -----CC--CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 148 -----IP--AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 148 -----~p--~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
.+ +...++.+++..+.+...+++..|++..-++...|+|..-
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI 198 (351)
T ss_pred hhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence 00 1124677788888888788888899988888888899753
No 54
>PLN02427 UDP-apiose/xylose synthase
Probab=98.98 E-value=1.7e-09 Score=102.46 Aligned_cols=172 Identities=10% Similarity=0.069 Sum_probs=103.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcc-cCCCCCCeEEEEEecCCchhhhhhhhhhhh----hhccC-CcccEEEeCChhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELV----DAAFP-LLKGVVATTDAVE 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~-~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~----~~~~~-~~~~v~~~~~~~~ 77 (300)
++|||+||||+||||++++..|+.++ . +|+.+|... ++.... .+.. +.... ...++.-..+..+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-------~V~~l~r~~--~~~~~l-~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 82 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH-------KVLALDVYN--DKIKHL-LEPDTVPWSGRIQFHRINIKHDSRLEG 82 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC-------EEEEEecCc--hhhhhh-hccccccCCCCeEEEEcCCCChHHHHH
Confidence 56899999999999999999999863 3 688888643 221110 0000 00000 0011111123456
Q ss_pred hcCCCcEEEEeCCCCCC--CCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----HHHHHCC-----
Q 022227 78 ACTGVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAP----- 146 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----~~~~~~~----- 146 (300)
+++++|+|||+|+.... ...+..+.+..|+....++++.+++.+ .++|++|+.. +... ...+..+
T Consensus 83 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~-vYg~~~~~~~~e~~p~~~~~ 158 (386)
T PLN02427 83 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCE-VYGKTIGSFLPKDHPLRQDP 158 (386)
T ss_pred HhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeee-eeCCCcCCCCCccccccccc
Confidence 78899999999986431 112334566789998999999887764 2567766531 1000 0000000
Q ss_pred ----------CC---C---CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 147 ----------SI---P---AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 147 ----------~~---p---~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
.. | +...++.+++..+++...+++..+++..-++...|+|.+.
T Consensus 159 ~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 217 (386)
T PLN02427 159 AFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM 217 (386)
T ss_pred ccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCC
Confidence 00 0 1124666777777777777777899999999888999753
No 55
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.94 E-value=4.8e-09 Score=96.95 Aligned_cols=170 Identities=11% Similarity=0.011 Sum_probs=111.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh----hhhhh--c----cCCcccEEEeCC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM----ELVDA--A----FPLLKGVVATTD 74 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~----dl~~~--~----~~~~~~v~~~~~ 74 (300)
..||+|+| +|.+|+.++..++..|+ +|+|+|.++ +.++.... .+... . .....+++.+++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~-------~V~l~D~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 76 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGL-------DVVAWDPAP--GAEAALRANVANAWPALERQGLAPGASPARLRFVAT 76 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCC
Confidence 46899999 79999999999998876 899999974 22221111 01110 0 011246677778
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCC-------
Q 022227 75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS------- 147 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~------- 147 (300)
+++++++||+||.+. .+|.++.+++.+.+.+.+++++ |+.||.+.....-+......
T Consensus 77 l~~av~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~la~~~~~p~R~~g~ 140 (321)
T PRK07066 77 IEACVADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDFYARATHPERCVVG 140 (321)
T ss_pred HHHHhcCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHHHHhcCCcccEEEE
Confidence 888999999999973 3456777888899999998875 88888876443333322111
Q ss_pred ---CCCCc-----E--EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceee
Q 022227 148 ---IPAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATV 201 (300)
Q Consensus 148 ---~p~~~-----i--~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v 201 (300)
.|+.. + +..|.-++......+.+.+|..|.-++.-. -|+..+ -+++.|+.|.-
T Consensus 141 HffnP~~~~pLVEVv~g~~T~~e~~~~~~~f~~~lGk~pV~v~kd~-pGFi~NRl~~a~~~EA~~ 204 (321)
T PRK07066 141 HPFNPVYLLPLVEVLGGERTAPEAVDAAMGIYRALGMRPLHVRKEV-PGFIADRLLEALWREALH 204 (321)
T ss_pred ecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCEeEecCCCC-ccHHHHHHHHHHHHHHHH
Confidence 13331 2 224667766666677788998887663222 477666 67777777654
No 56
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.93 E-value=7.6e-09 Score=95.18 Aligned_cols=172 Identities=15% Similarity=0.099 Sum_probs=103.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-----cc-CCcccEEEeCChhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-----AF-PLLKGVVATTDAVE 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-----~~-~~~~~v~~~~~~~~ 77 (300)
+.+||.||||+||||++++..|+..|. +++.++.+.. ... ....+... .. ....++.-.....+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY-------TVKATVRDPN--DPK-KTEHLLALDGAKERLHLFKANLLEEGSFDS 72 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC-------EEEEEEcCCC--chh-hHHHHHhccCCCCceEEEeccccCcchHHH
Confidence 457999999999999999999998875 6777766431 111 01111100 00 01112222234567
Q ss_pred hcCCCcEEEEeCCCCCCCCCcH-HHHHHhhHHHHHHHHHHHhhh-cCCCeEEEEecCchhhHHHH---------HHHHCC
Q 022227 78 ACTGVNIAVMVGGFPRKEGMER-KDVMSKNVSIYKAQASALEQH-AAPNCKVLVVANPANTNALI---------LKEFAP 146 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~g~~r-~dl~~~N~~i~~~i~~~i~~~-~~~~~~viv~sNP~~~~~~~---------~~~~~~ 146 (300)
+++++|+|||+|+......... .+.+..|+....++++.+.+. .. . ++|++|. .....+- +.+..+
T Consensus 73 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~-~-~~v~~SS-~~~~~y~~~~~~~~~~~~E~~~ 149 (322)
T PLN02662 73 VVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSV-K-RVVVTSS-MAAVAYNGKPLTPDVVVDETWF 149 (322)
T ss_pred HHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCC-C-EEEEccC-HHHhcCCCcCCCCCCcCCcccC
Confidence 7899999999998643222222 367788999999999998876 32 1 4555543 3211110 000000
Q ss_pred CCCC-----CcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 147 SIPA-----KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 147 ~~p~-----~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
..|. ...++.++...+++...+++..+++..-++...|+|..
T Consensus 150 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~ 196 (322)
T PLN02662 150 SDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL 196 (322)
T ss_pred CChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Confidence 0010 12456667777777666777889988888888888864
No 57
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.90 E-value=1.3e-08 Score=98.33 Aligned_cols=179 Identities=13% Similarity=0.191 Sum_probs=105.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCc--hh------hh---hhhhhhh---hhh---ccC-C
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--AE------AL---NGVKMEL---VDA---AFP-L 65 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~--~~------~l---~g~~~dl---~~~---~~~-~ 65 (300)
+.+||.||||+||||++++..|+..|. +|+++|.... .+ .+ ......+ .+. ... .
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v 118 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY-------EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY 118 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence 347899999999999999999998875 7888874210 00 00 0000000 000 000 0
Q ss_pred cccEEEeCChhhhcC--CCcEEEEeCCCCCCC-C-CcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh--
Q 022227 66 LKGVVATTDAVEACT--GVNIAVMVGGFPRKE-G-MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-- 136 (300)
Q Consensus 66 ~~~v~~~~~~~~a~~--~aDvVi~~ag~~~~~-g-~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~-- 136 (300)
..++.-.....++++ ++|+|||+|+....+ . .+. ...+..|+..+.++++.+.+++.+ .++|.+|...-.
T Consensus 119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~-~~~V~~SS~~vYG~ 197 (442)
T PLN02572 119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPD-CHLVKLGTMGEYGT 197 (442)
T ss_pred ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCC-ccEEEEecceecCC
Confidence 011111112344555 489999998654321 1 111 234578999999999999988642 346655532210
Q ss_pred ----HHH-HHH------HHCCCCC--CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC
Q 022227 137 ----NAL-ILK------EFAPSIP--AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS 190 (300)
Q Consensus 137 ----~~~-~~~------~~~~~~p--~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~ 190 (300)
+.. .+. +.....| +...|+.+++..+.+...+++.+|++...++...|+|.+..
T Consensus 198 ~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~ 264 (442)
T PLN02572 198 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTD 264 (442)
T ss_pred CCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCc
Confidence 000 000 0000011 23578999998888888888999999999999999997643
No 58
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.90 E-value=1.3e-08 Score=93.90 Aligned_cols=177 Identities=14% Similarity=0.080 Sum_probs=107.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhh--h---ccC-CcccEEEeCC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD--A---AFP-LLKGVVATTD 74 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~--~---~~~-~~~~v~~~~~ 74 (300)
|..+.++|.||||+|+||++++..|+..|. ++++++++. +.+... ..+.. . ... ...++.-..+
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~-------~V~~~~r~~--~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~ 70 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGY-------TINATVRDP--KDRKKT-DHLLALDGAKERLKLFKADLLDEGS 70 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcCC--cchhhH-HHHHhccCCCCceEEEeCCCCCchH
Confidence 556678999999999999999999998875 676666543 111111 01100 0 000 0112222223
Q ss_pred hhhhcCCCcEEEEeCCCCCCC-C-CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH--------HHHHH
Q 022227 75 AVEACTGVNIAVMVGGFPRKE-G-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--------ILKEF 144 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~~-g-~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~--------~~~~~ 144 (300)
..++++++|+|||+||..... . ....+.+..|+....++.+.+.++... .++|++|+-...... .+.+.
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~-~~iv~~SS~~~~~~~~~~~~~~~~~~E~ 149 (325)
T PLN02989 71 FELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSV-KRVILTSSMAAVLAPETKLGPNDVVDET 149 (325)
T ss_pred HHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCc-eEEEEecchhheecCCccCCCCCccCcC
Confidence 456678899999999864321 1 123456788999999999998876321 256665543221110 00111
Q ss_pred CCCCC-----CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 145 APSIP-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 145 ~~~~p-----~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
.+..| +...++.+++..+++...+++..+++..-++...|+|..
T Consensus 150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred CCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence 01111 123577788888888888888889988888888888964
No 59
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.89 E-value=1.3e-08 Score=93.82 Aligned_cols=177 Identities=14% Similarity=0.096 Sum_probs=103.6
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCc-hhhhhhhhhhhhhh--cc-CCcccEEEeCChh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDA--AF-PLLKGVVATTDAV 76 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~-~~~l~g~~~dl~~~--~~-~~~~~v~~~~~~~ 76 (300)
|.-+.++|.||||+|+||++++..|+..|+ +|++...+.. .+++... ...... .. ....++.-.....
T Consensus 1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~ 72 (322)
T PLN02986 1 MNGGGKLVCVTGASGYIASWIVKLLLLRGY-------TVKATVRDLTDRKKTEHL-LALDGAKERLKLFKADLLEESSFE 72 (322)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCCcchHHHHHH-HhccCCCCceEEEecCCCCcchHH
Confidence 554567999999999999999999998875 5664433321 1111100 000000 00 0011222222456
Q ss_pred hhcCCCcEEEEeCCCCCCC-CCcHHHHHHhhHHHHHHHHHHHhhhcCCCe-EEEEecCchhhHHHH---------HHHHC
Q 022227 77 EACTGVNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEQHAAPNC-KVLVVANPANTNALI---------LKEFA 145 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~~-g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~-~viv~sNP~~~~~~~---------~~~~~ 145 (300)
++++++|+|||+|+..... .....+++..|+....++.+.+.+.. ++ ++|++|..... .+. ..+..
T Consensus 73 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~v~rvV~~SS~~~~-~~~~~~~~~~~~~~E~~ 149 (322)
T PLN02986 73 QAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP--SVKRVILTSSTAAV-LFRQPPIEANDVVDETF 149 (322)
T ss_pred HHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcC--CccEEEEecchhhe-ecCCccCCCCCCcCccc
Confidence 7788999999999864221 11223567889999999999988752 23 45555443221 110 00000
Q ss_pred CCCC-----CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 146 PSIP-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 146 ~~~p-----~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
+..| +...++.++...+++...+++..+++...++...|+|..
T Consensus 150 ~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~ 197 (322)
T PLN02986 150 FSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPL 197 (322)
T ss_pred CCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCC
Confidence 0001 123567777777777777778889888888888888863
No 60
>PLN02214 cinnamoyl-CoA reductase
Probab=98.89 E-value=1.2e-08 Score=95.29 Aligned_cols=172 Identities=15% Similarity=0.099 Sum_probs=106.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh-hhhhhhhhhc--c-CCcccEEEeCChhhhc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAA--F-PLLKGVVATTDAVEAC 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~-g~~~dl~~~~--~-~~~~~v~~~~~~~~a~ 79 (300)
+.++|+||||+||+|++++..|++.|+ +|+.++++.+ ... .....+.... . ....++.-..+..+++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 79 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGY-------TVKGTVRNPD--DPKNTHLRELEGGKERLILCKADLQDYEALKAAI 79 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCch--hhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH
Confidence 346899999999999999999998875 6777776431 111 0011111100 0 0011222223456778
Q ss_pred CCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH-------HHHHHCC-C--CC
Q 022227 80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL-------ILKEFAP-S--IP 149 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~-------~~~~~~~-~--~p 149 (300)
+++|+|||+|+... .+..+.+..|+..+.++++++.+.+. . ++|++|+-..+... .+.+..+ . .+
T Consensus 80 ~~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v-~-r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~ 154 (342)
T PLN02214 80 DGCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKV-K-RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFC 154 (342)
T ss_pred hcCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCC-C-EEEEeccceeeeccCCCCCCcccCcccCCChhhc
Confidence 99999999998642 23456788899999999999988753 2 46665543221100 0011000 0 01
Q ss_pred --CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 150 --AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 150 --~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
+...++.++...+++...+++..|++..-++...|+|...
T Consensus 155 ~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~ 196 (342)
T PLN02214 155 KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPL 196 (342)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCC
Confidence 1124566777777787777888899999999888999753
No 61
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.89 E-value=1e-08 Score=87.23 Aligned_cols=102 Identities=22% Similarity=0.380 Sum_probs=69.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhh----h----cc------CCcccEEEe
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD----A----AF------PLLKGVVAT 72 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~----~----~~------~~~~~v~~~ 72 (300)
||+|+| +|.+|..++..++..|+ +++|+|.++ +.++.....+.+ . .. ....+++.+
T Consensus 1 ~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 70 (180)
T PF02737_consen 1 KVAVIG-AGTMGRGIAALFARAGY-------EVTLYDRSP--EALERARKRIERLLDRLVRKGRLSQEEADAALARISFT 70 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS-------EEEEE-SSH--HHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEE
T ss_pred CEEEEc-CCHHHHHHHHHHHhCCC-------cEEEEECCh--HHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccc
Confidence 799999 69999999999999886 899999974 333211111111 0 00 124688888
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 73 ~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
+++.++. +||+||-+. .++.++.+++.+.+++.+++++ |++||.+.
T Consensus 71 ~dl~~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~--ilasnTSs 116 (180)
T PF02737_consen 71 TDLEEAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDT--ILASNTSS 116 (180)
T ss_dssp SSGGGGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTS--EEEE--SS
T ss_pred cCHHHHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCc--eEEecCCC
Confidence 8876655 999999983 3467888999999999998885 77888764
No 62
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.89 E-value=2.1e-09 Score=97.35 Aligned_cols=172 Identities=20% Similarity=0.225 Sum_probs=104.5
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc----c-----CCcccEEEeCChhhh
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----F-----PLLKGVVATTDAVEA 78 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~----~-----~~~~~v~~~~~~~~a 78 (300)
|.||||+|++|+.++..|+..+- .+|+++|.++ ..+-....++.... . +...++.-......+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p------~~lil~d~~E--~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~ 72 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP------KKLILFDRDE--NKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI 72 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-------SEEEEEES-H--HHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCC------CeEEEeCCCh--hHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence 68999999999999999997642 2799999974 45555555553111 0 112233322335667
Q ss_pred cC--CCcEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEec-----CchhhHHHHHHHHCCCCC
Q 022227 79 CT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-----NPANTNALILKEFAPSIP 149 (300)
Q Consensus 79 ~~--~aDvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~s-----NP~~~~~~~~~~~~~~~p 149 (300)
++ +.|+|||+|....-| .....+.++.|+-..++++++..+++- + ++|.+| ||.+
T Consensus 73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v-~-~~v~ISTDKAv~Ptn-------------- 136 (293)
T PF02719_consen 73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGV-E-RFVFISTDKAVNPTN-------------- 136 (293)
T ss_dssp TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--S-EEEEEEECGCSS--S--------------
T ss_pred HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCC-C-EEEEccccccCCCCc--------------
Confidence 78 899999999875433 235577899999999999999999875 3 455554 3443
Q ss_pred CCcEEeeehhhHHHHHHHHHHHc---CCCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchh
Q 022227 150 AKNITCLTRLDHNRALGQISEKL---NVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVR 211 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l---~v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~ 211 (300)
+.|.|+.-.+++....+... +.....||.-+|+|..| |.+|.|.+--- .|.|++
T Consensus 137 ---vmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G-SVip~F~~Qi~----~g~PlT 193 (293)
T PF02719_consen 137 ---VMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG-SVIPLFKKQIK----NGGPLT 193 (293)
T ss_dssp ---HHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT-SCHHHHHHHHH----TTSSEE
T ss_pred ---HHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC-cHHHHHHHHHH----cCCcce
Confidence 43555555556555555544 34456677777888665 56777655444 677774
No 63
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.86 E-value=1.8e-08 Score=91.90 Aligned_cols=164 Identities=18% Similarity=0.174 Sum_probs=105.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhh-----hhhhhhhhhhccCCcccEEEeCChhhhcCC
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-----NGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l-----~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (300)
+|.||||+||||++++..|++.|. +++.+|........ .....|+.+. ....+.+++
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~d~~~~-----------~~~~~~~~~ 63 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGH-------DVRGLDRLRDGLDPLLSGVEFVVLDLTDR-----------DLVDELAKG 63 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCC-------eEEEEeCCCccccccccccceeeecccch-----------HHHHHHHhc
Confidence 599999999999999999998765 79999975321100 0011122211 134455667
Q ss_pred C-cEEEEeCCCCCCCCCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH-H----HHHHH-CCCCCCC
Q 022227 82 V-NIAVMVGGFPRKEGMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-L----ILKEF-APSIPAK 151 (300)
Q Consensus 82 a-DvVi~~ag~~~~~g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~-~----~~~~~-~~~~p~~ 151 (300)
. |.|||+|+....++..+ .+....|+...+++++++.+.+. .++|. +++..... . .+.+. .+..|..
T Consensus 64 ~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~--~~~v~-~ss~~~~~~~~~~~~~~E~~~~~~p~~ 140 (314)
T COG0451 64 VPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV--KRFVF-ASSVSVVYGDPPPLPIDEDLGPPRPLN 140 (314)
T ss_pred CCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC--CeEEE-eCCCceECCCCCCCCcccccCCCCCCC
Confidence 7 99999998765444432 35788999999999999998432 23444 44432111 0 11111 0111211
Q ss_pred cEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCce
Q 022227 152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQ 192 (300)
Q Consensus 152 ~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~ 192 (300)
.++.+++..++.....++..+++..-++...|+|......
T Consensus 141 -~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~ 180 (314)
T COG0451 141 -PYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPD 180 (314)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCC
Confidence 4778888888888877777889999999878898665433
No 64
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.86 E-value=1.1e-08 Score=95.39 Aligned_cols=173 Identities=9% Similarity=-0.031 Sum_probs=98.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCch---hhhhhhhhhhhh---hccC-CcccEEEeCChhhh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA---EALNGVKMELVD---AAFP-LLKGVVATTDAVEA 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~---~~l~g~~~dl~~---~~~~-~~~~v~~~~~~~~a 78 (300)
+||.||||+||||++++..|+..|. +|+++|..... +.+.....+... .... ...+++-.....++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~ 73 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-------EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI 73 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-------EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH
Confidence 4899999999999999999998875 78888875321 111111000000 0000 00111111123455
Q ss_pred cCC--CcEEEEeCCCCCCC-C-CcHHHHHHhhHHHHHHHHHHHhhhcCCC-eEEEEecCchhhHHHH----HHHHCCCCC
Q 022227 79 CTG--VNIAVMVGGFPRKE-G-MERKDVMSKNVSIYKAQASALEQHAAPN-CKVLVVANPANTNALI----LKEFAPSIP 149 (300)
Q Consensus 79 ~~~--aDvVi~~ag~~~~~-g-~~r~dl~~~N~~i~~~i~~~i~~~~~~~-~~viv~sNP~~~~~~~----~~~~~~~~p 149 (300)
+++ .|+|||+|+..... . ......+..|+....++++++.+.+-+. .++|.+|.. .+-... ..+. ....
T Consensus 74 ~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~-~vyg~~~~~~~~E~-~~~~ 151 (343)
T TIGR01472 74 IDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTS-ELYGKVQEIPQNET-TPFY 151 (343)
T ss_pred HHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccH-HhhCCCCCCCCCCC-CCCC
Confidence 664 59999999875322 1 1233445678889999999998865322 245555542 211100 0111 1122
Q ss_pred CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecC
Q 022227 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~ 187 (300)
+...++.+++..+++...+++.++++....+.+.++|.
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp 189 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESP 189 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCC
Confidence 34567888999888888888888876554444444454
No 65
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.84 E-value=2.9e-08 Score=92.05 Aligned_cols=172 Identities=14% Similarity=0.182 Sum_probs=104.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~~~v~~~~~~~~a~~~a 82 (300)
+.++|+||||+|++|++++..|+..+- ..+|+++|.+. ........++..... ....++.-..+..++++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~-----~~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~i 75 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYN-----PKKIIIYSRDE--LKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGV 75 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCC-----CcEEEEEcCCh--hHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcC
Confidence 357899999999999999999987641 01688888653 111111111111000 0011111122355677899
Q ss_pred cEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehhh
Q 022227 83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD 160 (300)
Q Consensus 83 DvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld 160 (300)
|+|||+||....+ ..+..+.+..|+.....+.+.+.+.+. . ++|++|... +..| ...++.++..
T Consensus 76 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~-~-~iV~~SS~~-----------~~~p-~~~Y~~sK~~ 141 (324)
T TIGR03589 76 DYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGV-K-RVVALSTDK-----------AANP-INLYGATKLA 141 (324)
T ss_pred CEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-C-EEEEEeCCC-----------CCCC-CCHHHHHHHH
Confidence 9999999874322 234567789999999999999998653 2 566666421 1112 2345666666
Q ss_pred HHHHHHHHH---HHcCCCCCCeEEEEEecCCCCceeeecc
Q 022227 161 HNRALGQIS---EKLNVQVSDVKNVIIWGNHSSSQYPDVN 197 (300)
Q Consensus 161 ~~R~~~~la---~~l~v~~~~V~~~~V~G~hg~~~~p~~s 197 (300)
.+++...++ +..|++...++...|+|..+ +.+|.+.
T Consensus 142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~~~~ 180 (324)
T TIGR03589 142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-SVVPFFK 180 (324)
T ss_pred HHHHHHHHHhhccccCcEEEEEeecceeCCCC-CcHHHHH
Confidence 666554433 35678888888888888643 3444443
No 66
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.83 E-value=2.2e-08 Score=101.53 Aligned_cols=170 Identities=14% Similarity=0.128 Sum_probs=107.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhc-ccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCC-hhhhcC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTD-AVEACT 80 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~-~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~-~~~a~~ 80 (300)
+.+||+||||+||||++++..|+.. ++ +|+.+|.... ..... +.+..... ..++.-..+ ..++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-------~V~~l~r~~~--~~~~~---~~~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNY-------EVYGLDIGSD--AISRF---LGHPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCc-------EEEEEeCCch--hhhhh---cCCCceEEEeccccCcHHHHHHHhc
Confidence 4579999999999999999999874 44 7888887531 11100 00000000 011110011 245688
Q ss_pred CCcEEEEeCCCCC--CCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----HHHHHCCC---CC--
Q 022227 81 GVNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPS---IP-- 149 (300)
Q Consensus 81 ~aDvVi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----~~~~~~~~---~p-- 149 (300)
++|+|||+|+... ....+..++...|+....++++++.+++ + ++|.+|+.. +... ...+..+- .|
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~--~~V~~SS~~-vyg~~~~~~~~E~~~~~~~~p~~ 457 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K--RIIFPSTSE-VYGMCTDKYFDEDTSNLIVGPIN 457 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C--eEEEEcchh-hcCCCCCCCcCccccccccCCCC
Confidence 9999999998643 1223455678889999999999999875 2 566666532 1100 00110000 01
Q ss_pred -CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 150 -AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 150 -~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
+...++.+++..+++...+++..+++...++...|+|...
T Consensus 458 ~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 498 (660)
T PRK08125 458 KQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRL 498 (660)
T ss_pred CCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCc
Confidence 1236888988888888888888899999999998999753
No 67
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.82 E-value=4.9e-08 Score=89.14 Aligned_cols=171 Identities=18% Similarity=0.208 Sum_probs=102.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhh-------hh-hcc------CCc
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL-------VD-AAF------PLL 66 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl-------~~-~~~------~~~ 66 (300)
|+++..||+|+| +|.+|..++..++..|+ +++|+|.++ +.++.....+ .+ ... ...
T Consensus 1 ~~~~~~~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~ 70 (286)
T PRK07819 1 MSDAIQRVGVVG-AGQMGAGIAEVCARAGV-------DVLVFETTE--ELATAGRNRIEKSLERAVSRGKLTERERDAAL 70 (286)
T ss_pred CCCCccEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHHHHHHHHHHHhcccCChhhHHHHH
Confidence 777777999999 79999999999998875 899999975 3332111111 00 000 123
Q ss_pred ccEEEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEecCchhhHHHHHHHHC
Q 022227 67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 67 ~~v~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
.+++.+++. +++++||+||.+. .++.++.+++...+++.+ ++++ |++||.+......+....
T Consensus 71 ~~l~~~~~~-~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~--il~snTS~~~~~~la~~~ 133 (286)
T PRK07819 71 ARLRFTTDL-GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDA--VLASNTSSIPIMKLAAAT 133 (286)
T ss_pred hCeEeeCCH-HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHhhc
Confidence 567777776 7799999999983 345677788888999997 6674 667777653322222221
Q ss_pred --CC--------CCCCc-----E--EeeehhhHHHHHHHHHH-HcCCCCCCeEEEEEecCCCC-ceeeecccee
Q 022227 146 --PS--------IPAKN-----I--TCLTRLDHNRALGQISE-KLNVQVSDVKNVIIWGNHSS-SQYPDVNHAT 200 (300)
Q Consensus 146 --~~--------~p~~~-----i--~~~t~ld~~R~~~~la~-~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~ 200 (300)
++ .|+.. + +..|.-.+......+.+ .+|..|.-++.. -|...+ -+.|.+..+.
T Consensus 134 ~~~~r~~g~hf~~P~~~~~lvElv~~~~T~~~~~~~~~~~~~~~lgk~pv~v~d~--pGfi~nRi~~~~~~Ea~ 205 (286)
T PRK07819 134 KRPGRVLGLHFFNPVPVLPLVELVPTLVTSEATVARAEEFASDVLGKQVVRAQDR--SGFVVNALLVPYLLSAI 205 (286)
T ss_pred CCCccEEEEecCCCcccCceEEEeCCCCCCHHHHHHHHHHHHHhCCCCceEecCC--CChHHHHHHHHHHHHHH
Confidence 11 12221 2 22355554433444545 588776555432 254444 4445555444
No 68
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.82 E-value=2.5e-08 Score=93.14 Aligned_cols=166 Identities=11% Similarity=0.085 Sum_probs=101.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhc-ccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-ccC-CcccEE-EeCChhhhcCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVV-ATTDAVEACTG 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~-~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-~~~-~~~~v~-~~~~~~~a~~~ 81 (300)
|||+||||+||+|++++..|+.. +. +|+.+|... ++.. ++... ... ...++. -.....+++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~-------~V~~~~r~~--~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 68 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW-------EVYGMDMQT--DRLG----DLVNHPRMHFFEGDITINKEWIEYHVKK 68 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC-------eEEEEeCcH--HHHH----HhccCCCeEEEeCCCCCCHHHHHHHHcC
Confidence 68999999999999999999874 33 788888642 2111 11100 000 001111 00123356789
Q ss_pred CcEEEEeCCCCCC--CCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----HHHHHCCCC---C---
Q 022227 82 VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSI---P--- 149 (300)
Q Consensus 82 aDvVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----~~~~~~~~~---p--- 149 (300)
+|+|||+|+.... ...+.......|+....++++++++.. .++|.+|+.. +... ...+..+.+ |
T Consensus 69 ~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~-vyg~~~~~~~~ee~~~~~~~~~~~ 144 (347)
T PRK11908 69 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSE-VYGMCPDEEFDPEASPLVYGPINK 144 (347)
T ss_pred CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecce-eeccCCCcCcCccccccccCcCCC
Confidence 9999999875421 223345567788999999999998763 3677666532 1000 000000101 1
Q ss_pred CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
+...++.++...+.....++++.+++..-++...|+|.+
T Consensus 145 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 145 PRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG 183 (347)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence 122466677777777777778889999999988889964
No 69
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.80 E-value=4.9e-08 Score=91.41 Aligned_cols=176 Identities=14% Similarity=0.112 Sum_probs=103.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-cC-CcccEEEeCChhhhcCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACTG 81 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~~-~~~~v~~~~~~~~a~~~ 81 (300)
..+||.||||+||||++++..|++.|. +|++++.+. +.......++.... .. ...++.-.....+++++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY-------TVHATLRDP--AKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG 79 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC
Confidence 358999999999999999999998875 677776642 22211111111100 00 00111111124566788
Q ss_pred CcEEEEeCCCCCCC---C-CcHHH-----HHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH--------HHHHH
Q 022227 82 VNIAVMVGGFPRKE---G-MERKD-----VMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--------ILKEF 144 (300)
Q Consensus 82 aDvVi~~ag~~~~~---g-~~r~d-----l~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~--------~~~~~ 144 (300)
+|+|||+|+..... . .+..+ .+..|+....++++.+.+... -.++|++|+....... .+.+.
T Consensus 80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~~~~~~E~ 158 (353)
T PLN02896 80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKT-VKRVVFTSSISTLTAKDSNGRWRAVVDET 158 (353)
T ss_pred CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCC-ccEEEEEechhhccccccCCCCCCccCcc
Confidence 99999999864321 1 12222 334456888999998887631 1256666653211100 00000
Q ss_pred C--C------CCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 145 A--P------SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 145 ~--~------~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
. + ..++...++.+++..+++...+++..+++..-++...|+|.+-
T Consensus 159 ~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 159 CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL 211 (353)
T ss_pred cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence 0 0 0011125788888888888888988999999999888899754
No 70
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.79 E-value=6e-08 Score=88.82 Aligned_cols=163 Identities=17% Similarity=0.201 Sum_probs=98.3
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhh-hhhhhhhhhhccCCcccEEEeCC-hhhhc-----C
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAAFPLLKGVVATTD-AVEAC-----T 80 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l-~g~~~dl~~~~~~~~~~v~~~~~-~~~a~-----~ 80 (300)
|.||||+||||++++..|+..|. . .+.++|........ .-...|+.|.. ...+ ..+++ .
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~~~~~~~~~~d~~--------~~~~~~~~~~~~~~~~ 67 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-T-----DILVVDNLKDGTKFVNLVDLDIADYM--------DKEDFLAQIMAGDDFG 67 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-c-----eEEEecCCCcchHHHhhhhhhhhhhh--------hHHHHHHHHhcccccC
Confidence 78999999999999999998764 1 46677764311110 10112332211 0001 12222 3
Q ss_pred CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----HHHHHCCCCCCCcEEee
Q 022227 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL 156 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----~~~~~~~~~p~~~i~~~ 156 (300)
++|+|||+|+.+.....+.....+.|+....++++.+.+.+ +++|..|+.. +... ...+. ....+...++.
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~---~~~i~~SS~~-vyg~~~~~~~~E~-~~~~p~~~Y~~ 142 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE---IPFLYASSAA-TYGGRTDDFIEER-EYEKPLNVYGY 142 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC---CcEEEEcchH-HhCcCCCCCCccC-CCCCCCCHHHH
Confidence 69999999986543333445578889999999999998863 4566655432 1100 00010 00112234667
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 157 t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
++...+++...+++..+++...++...|+|...
T Consensus 143 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 143 SKFLFDEYVRQILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCC
Confidence 777777776667767788888889888899654
No 71
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.78 E-value=1.9e-08 Score=91.96 Aligned_cols=173 Identities=21% Similarity=0.208 Sum_probs=113.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh---hhhhhh-hhhc----------cCCcccEE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN---GVKMEL-VDAA----------FPLLKGVV 70 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~---g~~~dl-~~~~----------~~~~~~v~ 70 (300)
-+||+|+| +|.+|+.+|..++..|+ +|+|+|+++ +.++ ...... .... .....+++
T Consensus 3 i~kv~ViG-aG~MG~gIA~~~A~~G~-------~V~l~D~~~--~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~ 72 (307)
T COG1250 3 IKKVAVIG-AGVMGAGIAAVFALAGY-------DVVLKDISP--EALERALAYIEKNLEKLVEKGKLTEEEADAALARIT 72 (307)
T ss_pred ccEEEEEc-ccchhHHHHHHHhhcCC-------ceEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhcc
Confidence 46999999 79999999999998665 799999974 2222 111111 1000 01234566
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh-hHHHHHHHHC-CC-
Q 022227 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN-TNALILKEFA-PS- 147 (300)
Q Consensus 71 ~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~-~~~~~~~~~~-~~- 147 (300)
.++++ +++++||+||-+. -+|.++.+++.+.+.++++|++ |+.||.+. .++.++.... |.
T Consensus 73 ~~~~~-~~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSsl~it~ia~~~~rper 135 (307)
T COG1250 73 PTTDL-AALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSSLSITELAEALKRPER 135 (307)
T ss_pred ccCch-hHhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCCCCHHHHHHHhCCchh
Confidence 56554 5899999999873 4678889999999999998875 88999875 4444443321 11
Q ss_pred -------CCCCc------E-EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceeeeccCC
Q 022227 148 -------IPAKN------I-TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAG 206 (300)
Q Consensus 148 -------~p~~~------i-~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v~~~~~ 206 (300)
.|+.. + +-.|.-++......+++++|..|..++.. -|+..+ -..|.|..|.....++
T Consensus 136 ~iG~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~vv~~D~--pGFi~NRil~~~~~eA~~l~~eG 207 (307)
T COG1250 136 FIGLHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTPVVVKDV--PGFIVNRLLAALLNEAIRLLEEG 207 (307)
T ss_pred EEEEeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCCEeecCC--CceehHhHHHHHHHHHHHHHHhC
Confidence 13321 3 22477778888888999999666322322 466666 4667777776533333
No 72
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.77 E-value=2.7e-08 Score=92.98 Aligned_cols=173 Identities=12% Similarity=0.056 Sum_probs=102.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-ccC-CcccEEEeCChhhhcCC-
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVVATTDAVEACTG- 81 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-~~~-~~~~v~~~~~~~~a~~~- 81 (300)
.++|.|+||+|++|++++..|++.|. +|+.+|.+.. ........+... ... ...++.-..+..+.+++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA-------EVYGYSLDPP--TSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF 74 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC-------EEEEEeCCCc--cchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc
Confidence 47899999999999999999998774 6888887532 111110011100 000 01111111123344554
Q ss_pred -CcEEEEeCCCCCC--CCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH----HHHHHHCCCCCCCcEE
Q 022227 82 -VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFAPSIPAKNIT 154 (300)
Q Consensus 82 -aDvVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~----~~~~~~~~~~p~~~i~ 154 (300)
.|+|||+|+.+.. ...+....+..|+....++++.+.+.+.. .++|++|+..-.-. .-..+. ...++...+
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~-~~iv~~SS~~vyg~~~~~~~~~e~-~~~~p~~~Y 152 (349)
T TIGR02622 75 KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSV-KAVVNVTSDKCYRNDEWVWGYRET-DPLGGHDPY 152 (349)
T ss_pred CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCC-CEEEEEechhhhCCCCCCCCCccC-CCCCCCCcc
Confidence 5999999985422 12234566788999999999998876421 25676665321000 000011 112223467
Q ss_pred eeehhhHHHHHHHHHHHc-------CCCCCCeEEEEEecCC
Q 022227 155 CLTRLDHNRALGQISEKL-------NVQVSDVKNVIIWGNH 188 (300)
Q Consensus 155 ~~t~ld~~R~~~~la~~l-------~v~~~~V~~~~V~G~h 188 (300)
+.++...+++...+++.+ +++...++...|+|..
T Consensus 153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 778888877777777665 7778888888888864
No 73
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.76 E-value=5.5e-08 Score=90.87 Aligned_cols=175 Identities=11% Similarity=0.075 Sum_probs=104.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-ccC-CcccEEEeCChhhhcC--C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVVATTDAVEACT--G 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-~~~-~~~~v~~~~~~~~a~~--~ 81 (300)
+||.||||+||||++++..|+..|.- .++++|..+....+.... .+... ... ...++.-..+..++++ +
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~------~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSD------AVVVVDKLTYAGNLMSLA-PVAQSERFAFEKVDICDRAELARVFTEHQ 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCC------EEEEEecCccccchhhhh-hcccCCceEEEECCCcChHHHHHHHhhcC
Confidence 58999999999999999999987641 356667542111111000 00000 000 0011111123445565 3
Q ss_pred CcEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhc------CCCe-EEEEecCchhhHHH------HHHHHCC
Q 022227 82 VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHA------APNC-KVLVVANPANTNAL------ILKEFAP 146 (300)
Q Consensus 82 aDvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~------~~~~-~viv~sNP~~~~~~------~~~~~~~ 146 (300)
+|+|||+||..... .....+....|+.....+++.+.++. .+.+ ++|.+|... +... .+.+. .
T Consensus 75 ~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~E~-~ 152 (355)
T PRK10217 75 PDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHSTDDFFTET-T 152 (355)
T ss_pred CCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCCCCCCcCCC-C
Confidence 89999999875321 12345677889999999999997641 1122 456555432 1100 00111 1
Q ss_pred CCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 147 ~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
...+...++.+++..+++...+++..+++..-++...|+|.+.
T Consensus 153 ~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 153 PYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 1122345788888888888888899999998899888899764
No 74
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.75 E-value=5.7e-08 Score=90.65 Aligned_cols=175 Identities=11% Similarity=0.075 Sum_probs=102.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-cC-CcccEEEeCChhhhcC--C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACT--G 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~~-~~~~v~~~~~~~~a~~--~ 81 (300)
|||.||||+|+||++++..|+..|.- .++.+|......... ...++.... .. ...++.-..+..++++ +
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~------~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD------SVVNVDKLTYAGNLE-SLADVSDSERYVFEHADICDRAELDRIFAQHQ 73 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC------eEEEecCCCccchHH-HHHhcccCCceEEEEecCCCHHHHHHHHHhcC
Confidence 48999999999999999999987631 355566431101111 000110000 00 0011111113344554 4
Q ss_pred CcEEEEeCCCCCC--CCCcHHHHHHhhHHHHHHHHHHHhhhc------CCCe-EEEEecCchhhHHH-------------
Q 022227 82 VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHA------APNC-KVLVVANPANTNAL------------- 139 (300)
Q Consensus 82 aDvVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~------~~~~-~viv~sNP~~~~~~------------- 139 (300)
+|+|||+|+.... ......+....|+....++++.+.++. .+.+ ++|.+|... +...
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~ 152 (352)
T PRK10084 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEEL 152 (352)
T ss_pred CCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccC
Confidence 8999999986532 122345678899999999999998751 0112 456565432 1110
Q ss_pred -HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 140 -ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 140 -~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
.+.+. ....+...++.++...+++...+++.++++...++...|+|.+.
T Consensus 153 ~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 153 PLFTET-TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCcccc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 00111 11122346888899888888888888999888888888899763
No 75
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.74 E-value=3.7e-08 Score=90.24 Aligned_cols=157 Identities=15% Similarity=0.122 Sum_probs=93.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC--CCc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN 83 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~--~aD 83 (300)
|||.||||+||+|++++..|+..| +++.+|... .. ...|+.+.. ...++++ ++|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~--~~---~~~Dl~d~~-----------~~~~~~~~~~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHS--TD---YCGDFSNPE-----------GVAETVRKIRPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEecccc--cc---ccCCCCCHH-----------HHHHHHHhcCCC
Confidence 489999999999999999998764 366677642 11 123554432 2344555 589
Q ss_pred EEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh--HHH-HHHHHCCCCCCCcEEeeeh
Q 022227 84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT--NAL-ILKEFAPSIPAKNITCLTR 158 (300)
Q Consensus 84 vVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~--~~~-~~~~~~~~~p~~~i~~~t~ 158 (300)
+|||+|+..... ..+.......|+....++++.+++.+ +++|.+|...-. ... -..+. ....+.+.++.++
T Consensus 57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g---~~~v~~Ss~~Vy~~~~~~p~~E~-~~~~P~~~Yg~sK 132 (299)
T PRK09987 57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG---AWVVHYSTDYVFPGTGDIPWQET-DATAPLNVYGETK 132 (299)
T ss_pred EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEccceEECCCCCCCcCCC-CCCCCCCHHHHHH
Confidence 999999865321 12334445789999999999998874 466666643200 000 00010 0111234567777
Q ss_pred hhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceee
Q 022227 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194 (300)
Q Consensus 159 ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p 194 (300)
+..+++... +..+..-+|...|+|..+.+.++
T Consensus 133 ~~~E~~~~~----~~~~~~ilR~~~vyGp~~~~~~~ 164 (299)
T PRK09987 133 LAGEKALQE----HCAKHLIFRTSWVYAGKGNNFAK 164 (299)
T ss_pred HHHHHHHHH----hCCCEEEEecceecCCCCCCHHH
Confidence 766554332 23344566777788865554444
No 76
>PLN02240 UDP-glucose 4-epimerase
Probab=98.72 E-value=6.5e-08 Score=90.15 Aligned_cols=177 Identities=15% Similarity=0.060 Sum_probs=98.4
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhh-hhhhhhhhhhccC----CcccEEEeCCh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAAFP----LLKGVVATTDA 75 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l-~g~~~dl~~~~~~----~~~~v~~~~~~ 75 (300)
|++..+||+|+||+|++|++++..|+..|. +|+++|........ .....++...... ...++.-..+.
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l 73 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGY-------KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEAL 73 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHH
Confidence 777788999999999999999999998764 78888753210000 0000111000000 00111111123
Q ss_pred hhhcC--CCcEEEEeCCCCCC-CC-CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH----HHHHCCC
Q 022227 76 VEACT--GVNIAVMVGGFPRK-EG-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEFAPS 147 (300)
Q Consensus 76 ~~a~~--~aDvVi~~ag~~~~-~g-~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~----~~~~~~~ 147 (300)
.++++ ++|+||++|+.... .. ....+.+..|+.....+++.+.+... . ++|.+|+ ..+.... +.+. ..
T Consensus 74 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~v~~Ss-~~vyg~~~~~~~~E~-~~ 149 (352)
T PLN02240 74 EKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGC-K-KLVFSSS-ATVYGQPEEVPCTEE-FP 149 (352)
T ss_pred HHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCC-C-EEEEEcc-HHHhCCCCCCCCCCC-CC
Confidence 33343 68999999986431 11 23456788999999999999887643 2 4666664 3211000 0000 01
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHH-cCCCCCCeEEEEEecCC
Q 022227 148 IPAKNITCLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~-l~v~~~~V~~~~V~G~h 188 (300)
..+...++.++...+++...+++. .++...-++.+.|+|.|
T Consensus 150 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~ 191 (352)
T PLN02240 150 LSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAH 191 (352)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence 111223556666666666555543 46666666766666754
No 77
>PLN02686 cinnamoyl-CoA reductase
Probab=98.70 E-value=4.2e-08 Score=92.59 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=102.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhh---------hccCCcccEEEeCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD---------AAFPLLKGVVATTD 74 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~---------~~~~~~~~v~~~~~ 74 (300)
+.++|+||||+||+|++++..|++.|+ +|+++..+. +.++.. .++.. .......++.-..+
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~-------~V~~~~r~~--~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~ 121 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGY-------SVRIAVDTQ--EDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES 121 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence 457999999999999999999998875 676654432 222111 11110 00000112211223
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCC--cHHHHHHhhHHHHHHHHHHHhhhcCCCe-EEEEecCchhhHHH----------HH
Q 022227 75 AVEACTGVNIAVMVGGFPRKEGM--ERKDVMSKNVSIYKAQASALEQHAAPNC-KVLVVANPANTNAL----------IL 141 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~~g~--~r~dl~~~N~~i~~~i~~~i~~~~~~~~-~viv~sNP~~~~~~----------~~ 141 (300)
..++++++|.|||+|+.....+. ....+...|+..++++++++.+.. ++ ++|.+|... ...+ .+
T Consensus 122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~--~v~r~V~~SS~~-~~vyg~~~~~~~~~~i 198 (367)
T PLN02686 122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTE--SVRKCVFTSSLL-ACVWRQNYPHDLPPVI 198 (367)
T ss_pred HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcC--CccEEEEeccHH-HhcccccCCCCCCccc
Confidence 45678899999999876432221 123456678999999999988753 23 455555432 1111 00
Q ss_pred HHHCC---CCC--CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 142 KEFAP---SIP--AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 142 ~~~~~---~~p--~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
.+..+ ..+ +...++.+++..+++...+++..|++..-++...|+|..
T Consensus 199 ~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 199 DEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred CCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 00000 001 112466778888888777888889999899888889974
No 78
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.68 E-value=9.1e-08 Score=87.89 Aligned_cols=168 Identities=17% Similarity=0.139 Sum_probs=100.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-CcccEEEeCChhhhcCCCcE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~~~v~~~~~~~~a~~~aDv 84 (300)
|||.|+||+|++|++++..|+..|. +++.+|.++. .... +.+.... ...++.-..+..++++++|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~d~ 67 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE-------EVRVLVRPTS--DRRN----LEGLDVEIVEGDLRDPASLRKAVAGCRA 67 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC-------EEEEEEecCc--cccc----cccCCceEEEeeCCCHHHHHHHHhCCCE
Confidence 4899999999999999999998774 7888887542 1110 1100000 00111111245667889999
Q ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----HHHHHCCCCCCC--cEEeeeh
Q 022227 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAK--NITCLTR 158 (300)
Q Consensus 85 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----~~~~~~~~~p~~--~i~~~t~ 158 (300)
||++|+.......+..+....|+.....+++.+.+.+. . ++|+.|+....-.. ...+..+..|.. ..++.++
T Consensus 68 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 68 LFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGV-E-RVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred EEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCC-C-eEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHH
Confidence 99998754333345566788899999999999887643 2 56666653211000 000000001111 1244556
Q ss_pred hhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 159 ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
+-.+++...+++..+++..-++...++|.+
T Consensus 146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~ 175 (328)
T TIGR03466 146 FLAEQAALEMAAEKGLPVVIVNPSTPIGPR 175 (328)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCC
Confidence 666677666777778888788777777754
No 79
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.4e-07 Score=91.37 Aligned_cols=176 Identities=19% Similarity=0.207 Sum_probs=114.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-----CCcccEEEeCChhhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-----PLLKGVVATTDAVEA 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-----~~~~~v~~~~~~~~a 78 (300)
+.++|.||||+|++|+.+...++..+ +.+++++|.++ -++.....++.+... +...++.-......+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~------p~~i~l~~~~E--~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~ 320 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFN------PKEIILFSRDE--YKLYLIDMELREKFPELKLRFYIGDVRDRDRVERA 320 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcC------CCEEEEecCch--HHHHHHHHHHHhhCCCcceEEEecccccHHHHHHH
Confidence 34689999999999999999998763 33899999975 344444555554211 122333333346778
Q ss_pred cCC--CcEEEEeCCCCCCCCC--cHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEec-----CchhhHHHHHHHHCCCCC
Q 022227 79 CTG--VNIAVMVGGFPRKEGM--ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-----NPANTNALILKEFAPSIP 149 (300)
Q Consensus 79 ~~~--aDvVi~~ag~~~~~g~--~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~s-----NP~~~~~~~~~~~~~~~p 149 (300)
+++ .|+|+|+|....-|-+ +..+-+..|+-..++++++..+++-+ +++.+| ||.++|
T Consensus 321 ~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~--~~V~iSTDKAV~PtNvm------------ 386 (588)
T COG1086 321 MEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVK--KFVLISTDKAVNPTNVM------------ 386 (588)
T ss_pred HhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCC--EEEEEecCcccCCchHh------------
Confidence 888 9999999988766644 45677899999999999999998753 345444 444433
Q ss_pred CCcEEeeehhhHHHHHHHHHHHcC---CCCCCeEEEEEecCCCCceeeeccceeeeccCCCcchh
Q 022227 150 AKNITCLTRLDHNRALGQISEKLN---VQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVR 211 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l~---v~~~~V~~~~V~G~hg~~~~p~~s~a~v~~~~~g~p~~ 211 (300)
|.|+.-.+.+-...+++.+ ....-||.=+|+|.-| |.+|+|.+--- .|.|++
T Consensus 387 -----GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG-SViPlFk~QI~----~GgplT 441 (588)
T COG1086 387 -----GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG-SVIPLFKKQIA----EGGPLT 441 (588)
T ss_pred -----hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC-CCHHHHHHHHH----cCCCcc
Confidence 4444333333333333222 3334566556777654 67887765444 566764
No 80
>PLN02583 cinnamoyl-CoA reductase
Probab=98.67 E-value=1.8e-07 Score=85.68 Aligned_cols=178 Identities=12% Similarity=0.059 Sum_probs=102.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc--c-CCcccEEEeCChhhh
Q 022227 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--F-PLLKGVVATTDAVEA 78 (300)
Q Consensus 2 ~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~--~-~~~~~v~~~~~~~~a 78 (300)
+.+.++|+||||+|++|++++..|+++|+ +|++++.+.+...+.....++.... . ....+++-..+..++
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~ 75 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGY-------TVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA 75 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH
Confidence 34557899999999999999999998875 6777765321122111111111000 0 001112112234678
Q ss_pred cCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCC--CC-------
Q 022227 79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS--IP------- 149 (300)
Q Consensus 79 ~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~--~p------- 149 (300)
++++|.|+++++.+........+++..|+.....+.+++.+.... .++|++|+-.... +.-...... ++
T Consensus 76 l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v-~riV~~SS~~a~~-~~~~~~~~~~~~~E~~~~~~ 153 (297)
T PLN02583 76 LKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTI-EKVVFTSSLTAVI-WRDDNISTQKDVDERSWSDQ 153 (297)
T ss_pred HcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEecchHhee-cccccCCCCCCCCcccCCCH
Confidence 999999999876543221223567889999999999999876311 2455555432211 000000000 00
Q ss_pred -----CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 150 -----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 150 -----~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
....++.++...+++...+++..|++...++...|+|..
T Consensus 154 ~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~ 197 (297)
T PLN02583 154 NFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPS 197 (297)
T ss_pred HHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCC
Confidence 001355667777777666666678888888877788864
No 81
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.67 E-value=1.1e-07 Score=97.15 Aligned_cols=166 Identities=19% Similarity=0.199 Sum_probs=112.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhh-h--hhh-hh----hhcc------CCcccEEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-V--KME-LV----DAAF------PLLKGVVA 71 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g-~--~~d-l~----~~~~------~~~~~v~~ 71 (300)
.||+|+| +|.+|..++..++..|+ +|+|+|.++ +.++. . ... +. .... ....+++.
T Consensus 314 ~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~ 383 (715)
T PRK11730 314 KQAAVLG-AGIMGGGIAYQSASKGV-------PVIMKDINQ--KALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP 383 (715)
T ss_pred ceEEEEC-CchhHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE
Confidence 5899999 79999999999998886 899999974 33321 1 111 10 0000 12357777
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh-hHHHHHHHHC-CC--
Q 022227 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN-TNALILKEFA-PS-- 147 (300)
Q Consensus 72 ~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~-~~~~~~~~~~-~~-- 147 (300)
++++ +++++||+||-+. .++.++.+++...+++++++++ |++||.+. .++.++.... +.
T Consensus 384 ~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la~~~~~p~r~ 446 (715)
T PRK11730 384 TLDY-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLLAKALKRPENF 446 (715)
T ss_pred eCCH-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhhcCCCccE
Confidence 7776 7799999999973 4567888999999999998874 77899876 4445544321 11
Q ss_pred ------CCCCc-----E--EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeecccee
Q 022227 148 ------IPAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHAT 200 (300)
Q Consensus 148 ------~p~~~-----i--~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~ 200 (300)
.|+.. | +..|.-++......+++.+|..|.-|+.. -|..++ -++|+++.+.
T Consensus 447 ~g~Hff~P~~~~~lVEvv~g~~T~~~~~~~~~~~~~~lgk~pv~v~d~--pGfv~nRi~~~~~~ea~ 511 (715)
T PRK11730 447 CGMHFFNPVHRMPLVEVIRGEKTSDETIATVVAYASKMGKTPIVVNDC--PGFFVNRVLFPYFAGFS 511 (715)
T ss_pred EEEecCCcccccceEEeeCCCCCCHHHHHHHHHHHHHhCCceEEecCc--CchhHHHHHHHHHHHHH
Confidence 13321 2 22366666666667789999999888644 487776 4566655554
No 82
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.67 E-value=1.1e-07 Score=96.67 Aligned_cols=178 Identities=13% Similarity=0.120 Sum_probs=103.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-ccC-CcccEEEeCChhhhc--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVVATTDAVEAC-- 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-~~~-~~~~v~~~~~~~~a~-- 79 (300)
+++||+||||+||||++++..|++.+. ..+|+.+|.....+.+.... ..... ... ...++.-.......+
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~-----~~~V~~~d~~~~~~~~~~l~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~ 78 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYP-----DYKIVVLDKLDYCSNLKNLN-PSKSSPNFKFVKGDIASADLVNYLLIT 78 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCC-----CCEEEEEeCCCccchhhhhh-hcccCCCeEEEECCCCChHHHHHHHhh
Confidence 468999999999999999999997631 12688888632111111000 00000 000 000110000111222
Q ss_pred CCCcEEEEeCCCCCCCC--CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH------HHCCCCCCC
Q 022227 80 TGVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK------EFAPSIPAK 151 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~g--~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~------~~~~~~p~~ 151 (300)
.++|+|||+|+...... .+..+....|+.....+++.+++.+. -.++|.+|. ..+...... .......+.
T Consensus 79 ~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-vkr~I~~SS-~~vyg~~~~~~~~~~~E~~~~~p~ 156 (668)
T PLN02260 79 EGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ-IRRFIHVST-DEVYGETDEDADVGNHEASQLLPT 156 (668)
T ss_pred cCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEcc-hHHhCCCccccccCccccCCCCCC
Confidence 68999999998754221 23346678899999999999988752 125666654 221100000 000011123
Q ss_pred cEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 152 ~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
..++.+++..+++...+++..+++..-++...|+|.+.
T Consensus 157 ~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 45778888888888777888899888888888899764
No 83
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.67 E-value=2.9e-07 Score=83.93 Aligned_cols=174 Identities=14% Similarity=0.063 Sum_probs=102.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-c-CCcccEEEeCChhhhcCC--C
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEACTG--V 82 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~-~~~~~v~~~~~~~~a~~~--a 82 (300)
||.||||+|++|++++..|+..+. ..+++++|........+ ...++.... . ....++.-..+..+++++ +
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-----~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 74 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-----DAEVIVLDKLTYAGNLE-NLADLEDNPRYRFVKGDIGDRELVSRLFTEHQP 74 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-----CCEEEEecCCCcchhhh-hhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCC
Confidence 589999999999999999987641 12678887532111111 001111100 0 000111111234556666 8
Q ss_pred cEEEEeCCCCCC--CCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh--HH--HHHHHHCCCCCCCcEEee
Q 022227 83 NIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT--NA--LILKEFAPSIPAKNITCL 156 (300)
Q Consensus 83 DvVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~--~~--~~~~~~~~~~p~~~i~~~ 156 (300)
|+||++|+.... ........+..|+.....+++.+.+... +.+++.+|...-. .. ....+. ....+...++.
T Consensus 75 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~~~~e~-~~~~~~~~Y~~ 152 (317)
T TIGR01181 75 DAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGDAFTET-TPLAPSSPYSA 152 (317)
T ss_pred CEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCCCcCCC-CCCCCCCchHH
Confidence 999999986431 1223455678899999999999988643 3466666542100 00 000111 11222345777
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 157 t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
++...+++...+++..+++..-++...|+|..
T Consensus 153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY 184 (317)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 78888887777788889988888888888854
No 84
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.64 E-value=1.5e-07 Score=95.86 Aligned_cols=167 Identities=17% Similarity=0.205 Sum_probs=111.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHh-cccCCCCCCeEEEEEecCCchhhhhhh---hh-hhhhhc----c------CCcccE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGV---KM-ELVDAA----F------PLLKGV 69 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~-~~~~~~~~~~~l~L~D~~~~~~~l~g~---~~-dl~~~~----~------~~~~~v 69 (300)
..||+|+| +|.+|+.++..++. .|+ +|+|+|.++ +.++.- .. .+.... . ....++
T Consensus 304 i~~v~ViG-aG~mG~~iA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 373 (699)
T TIGR02440 304 IKKVGILG-GGLMGGGIASVTATKAGI-------PVRIKDINP--QGINNALKYAWKLLDKGVKRRHMTPAERDNQMALI 373 (699)
T ss_pred ccEEEEEC-CcHHHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCe
Confidence 35899999 79999999998874 675 899999974 333211 11 111110 0 013577
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh-hHHHHHHHHC-CC
Q 022227 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN-TNALILKEFA-PS 147 (300)
Q Consensus 70 ~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~-~~~~~~~~~~-~~ 147 (300)
+.++++ ++++|||+||-+. .++.++.+++...++++++++ .|++||.+. .++.++.... ++
T Consensus 374 ~~~~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~--~ilasnTS~l~i~~la~~~~~p~ 436 (699)
T TIGR02440 374 TGTTDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAH--TIFASNTSSLPIGQIAAAASRPE 436 (699)
T ss_pred EEeCCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCC--cEEEeCCCCCCHHHHHHhcCCcc
Confidence 788776 6899999999973 356788899999999999877 477899876 4444443321 11
Q ss_pred --------CCCCc-----E--EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeecccee
Q 022227 148 --------IPAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHAT 200 (300)
Q Consensus 148 --------~p~~~-----i--~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~ 200 (300)
.|+.. | +..|.-++......+++.+|..|.-|+.. -|...+ -+.+.+..+.
T Consensus 437 r~~g~HffnP~~~~~lVEvv~g~~T~~~~~~~~~~~~~~~gk~pv~v~d~--pGfi~nRl~~~~~~Ea~ 503 (699)
T TIGR02440 437 NVIGLHYFSPVEKMPLVEVIPHAGTSEQTIATTVALAKKQGKTPIVVADK--AGFYVNRILAPYMNEAA 503 (699)
T ss_pred cEEEEecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEccc--cchHHHHHHHHHHHHHH
Confidence 13321 2 22466666666677888999999888653 477776 5666666664
No 85
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.64 E-value=1.5e-07 Score=96.00 Aligned_cols=168 Identities=19% Similarity=0.236 Sum_probs=114.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh-h--hhhhhhhhc-----c------CCcccEE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-G--VKMELVDAA-----F------PLLKGVV 70 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~-g--~~~dl~~~~-----~------~~~~~v~ 70 (300)
..||+|+| +|.+|..++..++..|+ +|+|+|.++ +.++ + ...+..+.. . ....+++
T Consensus 313 i~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 382 (714)
T TIGR02437 313 VKQAAVLG-AGIMGGGIAYQSASKGT-------PIVMKDINQ--HSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGIT 382 (714)
T ss_pred cceEEEEC-CchHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE
Confidence 36899999 79999999999998886 899999974 3332 1 111111100 0 1135777
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh-hHHHHHHHHC-CC-
Q 022227 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN-TNALILKEFA-PS- 147 (300)
Q Consensus 71 ~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~-~~~~~~~~~~-~~- 147 (300)
.++++ +++++||+||.+. -++.++.+++...+++.++|++ |++||.+. .++.++.... |.
T Consensus 383 ~~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasnTS~l~i~~ia~~~~~p~r 445 (714)
T TIGR02437 383 PTLSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDA--ILASNTSTISISLLAKALKRPEN 445 (714)
T ss_pred EeCCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHhhcCCccc
Confidence 77775 7799999999983 3567888999999999998875 78899876 3444443321 11
Q ss_pred -------CCCCc-----E--EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceee
Q 022227 148 -------IPAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATV 201 (300)
Q Consensus 148 -------~p~~~-----i--~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v 201 (300)
.|++. | +..|.-++......+++.+|..|.-|+.. -|..++ -++|.+..+.-
T Consensus 446 ~ig~Hff~P~~~~~lvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v~d~--pGfi~NRl~~~~~~ea~~ 512 (714)
T TIGR02437 446 FCGMHFFNPVHRMPLVEVIRGEKSSDETIATVVAYASKMGKTPIVVNDC--PGFFVNRVLFPYFGGFSK 512 (714)
T ss_pred EEEEecCCCcccCceEeecCCCCCCHHHHHHHHHHHHHcCCEEEEeCCc--ccchHHHHHHHHHHHHHH
Confidence 13321 2 22466777666777889999999888643 588887 56666666643
No 86
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.64 E-value=1.3e-07 Score=96.76 Aligned_cols=168 Identities=17% Similarity=0.182 Sum_probs=113.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhh---hhhhhhhhc-----c------CCcccEE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKMELVDAA-----F------PLLKGVV 70 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g---~~~dl~~~~-----~------~~~~~v~ 70 (300)
..||+|+| +|.+|+.++..++..|+ +|+|+|.++ +.++. ...+..+.. . ....+++
T Consensus 335 i~~v~ViG-aG~MG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~ 404 (737)
T TIGR02441 335 VKTLAVLG-AGLMGAGIAQVSVDKGL-------KTVLKDATP--AGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLT 404 (737)
T ss_pred ccEEEEEC-CCHhHHHHHHHHHhCCC-------cEEEecCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 36899999 69999999999998886 799999974 33321 111111110 0 1235777
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh-hHHHHHHHHC-CC-
Q 022227 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN-TNALILKEFA-PS- 147 (300)
Q Consensus 71 ~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~-~~~~~~~~~~-~~- 147 (300)
.++++ +++++||+||.+. -+|.++.+++.+.+++++++++ |++||++. .++.++.... |.
T Consensus 405 ~~~~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la~~~~~p~r 467 (737)
T TIGR02441 405 PTLDY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHC--IIASNTSALPIKDIAAVSSRPEK 467 (737)
T ss_pred EeCCH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhhcCCccc
Confidence 77775 6899999998873 4577888999999999998875 77899876 3444443321 11
Q ss_pred -------CCCCc-----E--EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceee
Q 022227 148 -------IPAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATV 201 (300)
Q Consensus 148 -------~p~~~-----i--~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v 201 (300)
.|++. | +..|.-++......+++.+|..|.-|+.. -|..++ -+.|.+..+.-
T Consensus 468 ~ig~Hff~P~~~m~LvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v~d~--pGFi~NRi~~~~~~ea~~ 534 (737)
T TIGR02441 468 VIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVVIVVKDG--PGFYTTRCLGPMLAEVIR 534 (737)
T ss_pred eEEEeccCCcccCceEEEeCCCCCCHHHHHHHHHHHHHCCCeEEEECCc--CCchHHHHHHHHHHHHHH
Confidence 13321 2 22477777666777889999988777543 587777 55666666653
No 87
>PLN02778 3,5-epimerase/4-reductase
Probab=98.62 E-value=2.5e-07 Score=84.90 Aligned_cols=139 Identities=12% Similarity=0.046 Sum_probs=83.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.|||.||||+||+|++++..|+..|. ++++...+. ........|+. + .++|+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-------~V~~~~~~~--~~~~~v~~~l~-----------------~--~~~D~ 60 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI-------DFHYGSGRL--ENRASLEADID-----------------A--VKPTH 60 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC-------EEEEecCcc--CCHHHHHHHHH-----------------h--cCCCE
Confidence 48999999999999999999998764 555432210 11111111111 0 26899
Q ss_pred EEEeCCCCCCCC-----CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----------HHHHHCCCCC
Q 022227 85 AVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----------ILKEFAPSIP 149 (300)
Q Consensus 85 Vi~~ag~~~~~g-----~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----------~~~~~~~~~p 149 (300)
|||+|+....+. .+..+.+..|+....++++.+++.+ ++++++|..+- ..+ ...+..+..|
T Consensus 61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g---v~~v~~sS~~v-y~~~~~~p~~~~~~~~Ee~~p~~ 136 (298)
T PLN02778 61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG---LVLTNYATGCI-FEYDDAHPLGSGIGFKEEDTPNF 136 (298)
T ss_pred EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC---CCEEEEecceE-eCCCCCCCcccCCCCCcCCCCCC
Confidence 999998754222 2456778899999999999999874 34555543210 000 0011111122
Q ss_pred CCcEEeeehhhHHHHHHHHHHHcCCC
Q 022227 150 AKNITCLTRLDHNRALGQISEKLNVQ 175 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l~v~ 175 (300)
+.+.++.+++..+++...+++.+++.
T Consensus 137 ~~s~Yg~sK~~~E~~~~~y~~~~~lr 162 (298)
T PLN02778 137 TGSFYSKTKAMVEELLKNYENVCTLR 162 (298)
T ss_pred CCCchHHHHHHHHHHHHHhhccEEee
Confidence 33577888888877766665554443
No 88
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.61 E-value=1.5e-07 Score=87.47 Aligned_cols=175 Identities=9% Similarity=-0.027 Sum_probs=97.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCch---hhhhhhhhhhhh--hccC-CcccEEEeCChhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA---EALNGVKMELVD--AAFP-LLKGVVATTDAVE 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~---~~l~g~~~dl~~--~~~~-~~~~v~~~~~~~~ 77 (300)
+.++|.||||+||+|++++..|+..|+ +|+++|..+.. +.++....+... .... ...++.-..+..+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-------EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence 457899999999999999999998875 78888765311 111111000000 0000 0011111112334
Q ss_pred hcCC--CcEEEEeCCCCCCCC--CcHHHHHHhhHHHHHHHHHHHhhhcCCC---eEEEEecCchhhHHHH---HHHHCCC
Q 022227 78 ACTG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPN---CKVLVVANPANTNALI---LKEFAPS 147 (300)
Q Consensus 78 a~~~--aDvVi~~ag~~~~~g--~~r~dl~~~N~~i~~~i~~~i~~~~~~~---~~viv~sNP~~~~~~~---~~~~~~~ 147 (300)
++++ .|+|||+|+...... .+....+..|+....++++.+.++..+. .++|++|. ..+.... ..+. ..
T Consensus 78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss-~~vyg~~~~~~~E~-~~ 155 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS-SEMYGSTPPPQSET-TP 155 (340)
T ss_pred HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc-HHHhCCCCCCCCCC-CC
Confidence 4554 599999998753221 1233456779999999999998876421 24555543 2211100 0000 01
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecC
Q 022227 148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~ 187 (300)
..+...++.++...+.+...+++.+++.....+.+.++|.
T Consensus 156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp 195 (340)
T PLN02653 156 FHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESP 195 (340)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCC
Confidence 1123467888888888877788888875443343344444
No 89
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.61 E-value=1.9e-07 Score=95.31 Aligned_cols=168 Identities=18% Similarity=0.234 Sum_probs=113.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHH-hcccCCCCCCeEEEEEecCCchhhhhh---hhhhhhhhc-----------cCCcccE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEALNG---VKMELVDAA-----------FPLLKGV 69 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~-~~~~~~~~~~~~l~L~D~~~~~~~l~g---~~~dl~~~~-----------~~~~~~v 69 (300)
..||+|+| +|.+|..++..++ ..|+ +|+|+|.++ +.++. ...+..+.. .....++
T Consensus 309 i~~v~ViG-aG~mG~giA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 378 (708)
T PRK11154 309 VNKVGVLG-GGLMGGGIAYVTATKAGL-------PVRIKDINP--QGINHALKYSWDLLDKKVKRRHLKPSERDKQMALI 378 (708)
T ss_pred ccEEEEEC-CchhhHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcE
Confidence 36899999 6999999999988 6675 899999964 33321 111111100 0123578
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh-hHHHHHHHHC-CC
Q 022227 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN-TNALILKEFA-PS 147 (300)
Q Consensus 70 ~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~-~~~~~~~~~~-~~ 147 (300)
+.++++ ++++|||+||.+. -+|.++.+++...++++++|++ |++||.+. .++.++.... ++
T Consensus 379 ~~~~~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la~~~~~p~ 441 (708)
T PRK11154 379 SGTTDY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIAAAAARPE 441 (708)
T ss_pred EEeCCh-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHHhcCccc
Confidence 888776 7899999999983 4678889999999999998875 77899876 4444443321 11
Q ss_pred --------CCCCc-----E--EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccceee
Q 022227 148 --------IPAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATV 201 (300)
Q Consensus 148 --------~p~~~-----i--~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~v 201 (300)
.|++. | +..|.-++......+++.+|..|.-|+.. -|..++ -+.|.+..+.-
T Consensus 442 r~ig~Hff~P~~~~~lVEvv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~d~--pGfi~nRl~~~~~~EA~~ 509 (708)
T PRK11154 442 QVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVVRDG--AGFYVNRILAPYINEAAR 509 (708)
T ss_pred ceEEEecCCccccCceEEEECCCCCCHHHHHHHHHHHHHcCCceEEEecc--CcHHHHHHHHHHHHHHHH
Confidence 13331 2 33477777777777889999988877643 477776 56666666653
No 90
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.60 E-value=5.5e-07 Score=82.18 Aligned_cols=168 Identities=20% Similarity=0.147 Sum_probs=96.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhh---hhhh-----cc-------CCcccE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME---LVDA-----AF-------PLLKGV 69 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~d---l~~~-----~~-------~~~~~v 69 (300)
.+||+|+| +|.+|+.++..|+..|. +|+++|.++ +.++..... +.+. .. ....++
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGF-------DVTIYDISD--EALEKAKERIAKLADRYVRDLEATKEAPAEAALNRI 72 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCe
Confidence 46999999 79999999999988764 799999864 333211111 1110 00 012466
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh-HHHHHHHHC-CC
Q 022227 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-PS 147 (300)
Q Consensus 70 ~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~-~~~~~~~~~-~~ 147 (300)
+.+++..+++++||+||.+. ..+.+..+++.+.+.+++++++ |+++|.+.. .+.+..... +.
T Consensus 73 ~~~~d~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~--ii~sntSt~~~~~~~~~~~~~~ 136 (287)
T PRK08293 73 TLTTDLAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKT--IFATNSSTLLPSQFAEATGRPE 136 (287)
T ss_pred EEeCCHHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCC--EEEECcccCCHHHHHhhcCCcc
Confidence 77888888899999999984 1234566777777888877665 445666542 233333221 10
Q ss_pred --------CCCC--c---EE--eeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccce
Q 022227 148 --------IPAK--N---IT--CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHA 199 (300)
Q Consensus 148 --------~p~~--~---i~--~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a 199 (300)
.|.. . +. ..|.-++......+.+.+|..|..+..-. -|+..+ -+.+.+..+
T Consensus 137 r~vg~Hf~~p~~~~~lvevv~~~~t~~~~~~~~~~~~~~~Gk~pv~v~~d~-pgfi~nRi~~~~~~ea 203 (287)
T PRK08293 137 KFLALHFANEIWKNNTAEIMGHPGTDPEVFDTVVAFAKAIGMVPIVLKKEQ-PGYILNSLLVPFLSAA 203 (287)
T ss_pred cEEEEcCCCCCCcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEecCCC-CCHhHHHHHHHHHHHH
Confidence 1221 1 22 23555554455566677886664442111 244444 344444444
No 91
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.60 E-value=3.7e-07 Score=84.58 Aligned_cols=173 Identities=15% Similarity=0.100 Sum_probs=96.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCc-hhhhhhhhhhhhhhccC-CcccEEEeCChhhhcC--C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFP-LLKGVVATTDAVEACT--G 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~-~~~l~g~~~dl~~~~~~-~~~~v~~~~~~~~a~~--~ 81 (300)
|||+||||+|++|++++..|+..|. +|+++|.... .........++.+.... ...++.-.....++++ +
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHA 73 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCC
Confidence 4899999999999999999998764 6888875321 11000000011110000 0011110112233444 6
Q ss_pred CcEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH----HHHHCCCCCCCcEEe
Q 022227 82 VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEFAPSIPAKNITC 155 (300)
Q Consensus 82 aDvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~----~~~~~~~~p~~~i~~ 155 (300)
+|+|||+|+..... .....+.+..|+.....+++.+++.+.+ ++|.+|+ ..+.... +.+..+.-.+...++
T Consensus 74 ~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss-~~~yg~~~~~~~~E~~~~~~p~~~Y~ 150 (338)
T PRK10675 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK--NLIFSSS-ATVYGDQPKIPYVESFPTGTPQSPYG 150 (338)
T ss_pred CCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEecc-HHhhCCCCCCccccccCCCCCCChhH
Confidence 89999999864321 1234567889999999999999887432 4555554 3221100 001000001122456
Q ss_pred eehhhHHHHHHHHHHH-cCCCCCCeEEEEEecCC
Q 022227 156 LTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 156 ~t~ld~~R~~~~la~~-l~v~~~~V~~~~V~G~h 188 (300)
.++...+++...+++. .+++..-+|...|+|.|
T Consensus 151 ~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~ 184 (338)
T PRK10675 151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH 184 (338)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence 6777777776666654 36666667766777876
No 92
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.59 E-value=1.5e-07 Score=87.75 Aligned_cols=176 Identities=17% Similarity=0.203 Sum_probs=102.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChhhhcCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTG 81 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~~a~~~ 81 (300)
+++.+++||||+||+|.+++..|++++. ..+++++|..+....+.....++....... ..++.-......|+++
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-----~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~ 76 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENEL-----KLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQG 76 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhccc-----ccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccC
Confidence 4557999999999999999999998763 138999998653222222222210111011 1222233357788999
Q ss_pred CcEEEEeCCCC-CCCCC-cHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhH---HHHHH-HHCCCCCCC--cE
Q 022227 82 VNIAVMVGGFP-RKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN---ALILK-EFAPSIPAK--NI 153 (300)
Q Consensus 82 aDvVi~~ag~~-~~~g~-~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~---~~~~~-~~~~~~p~~--~i 153 (300)
+ .|+|+|..+ ..-.+ .|......|+...+++.+++.+.+ ++.+|+|+...+. ..+.. .....+|.. ..
T Consensus 77 ~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~---v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~ 152 (361)
T KOG1430|consen 77 A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG---VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDP 152 (361)
T ss_pred c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC---CCEEEEecCceEEeCCeecccCCCCCCCccccccc
Confidence 9 666655432 22233 466667889999999999999985 4456666554321 11111 111123422 15
Q ss_pred EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecC
Q 022227 154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (300)
Q Consensus 154 ~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~ 187 (300)
++.|+...+++....+..-+....-+|...|+|+
T Consensus 153 Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGp 186 (361)
T KOG1430|consen 153 YGESKALAEKLVLEANGSDDLYTCALRPPGIYGP 186 (361)
T ss_pred cchHHHHHHHHHHHhcCCCCeeEEEEccccccCC
Confidence 7777776655554443333345566666666775
No 93
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.57 E-value=1.3e-07 Score=84.30 Aligned_cols=170 Identities=13% Similarity=0.021 Sum_probs=106.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
.++||+||||+||||||++..|+..|- +|..+|...+ +....++++.....-++........-+..+|
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh-------~VIa~Dn~ft-----g~k~n~~~~~~~~~fel~~hdv~~pl~~evD 93 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGH-------EVIALDNYFT-----GRKENLEHWIGHPNFELIRHDVVEPLLKEVD 93 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCC-------eEEEEecccc-----cchhhcchhccCcceeEEEeechhHHHHHhh
Confidence 458999999999999999999998762 7888887532 2223344443222223333333445688999
Q ss_pred EEEEeCCCCCCCC--CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH--------HHHHHCCCCCCCcE
Q 022227 84 IAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--------ILKEFAPSIPAKNI 153 (300)
Q Consensus 84 vVi~~ag~~~~~g--~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~--------~~~~~~~~~p~~~i 153 (300)
-|+++|.....++ .+..+.+..|.-.+.+.....++.+ ++++.+|... +-.. .-|-....+.++--
T Consensus 94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aSTse-VYgdp~~hpq~e~ywg~vnpigpr~c 169 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTSE-VYGDPLVHPQVETYWGNVNPIGPRSC 169 (350)
T ss_pred hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEeeccc-ccCCcccCCCccccccccCcCCchhh
Confidence 9999987654333 2445567778777777777777774 5677766432 1100 00000000111223
Q ss_pred EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 154 ~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
+...++-++++.+.+.+..|+..+-.+.++.+|.-+
T Consensus 170 ydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 170 YDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred hhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 445566677888888899999888888888778554
No 94
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.57 E-value=2.5e-07 Score=85.38 Aligned_cols=109 Identities=12% Similarity=0.045 Sum_probs=69.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-CcccEEEeCChhhhcCCCcE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~~~v~~~~~~~~a~~~aDv 84 (300)
|||+|+||+|++|++++..|+..|+ +|+.++++. ++... +.+.... ...++.-..+..++++++|+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~-------~V~~l~R~~--~~~~~----l~~~~v~~v~~Dl~d~~~l~~al~g~d~ 67 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY-------QVRCLVRNL--RKASF----LKEWGAELVYGDLSLPETLPPSFKGVTA 67 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCh--HHhhh----HhhcCCEEEECCCCCHHHHHHHHCCCCE
Confidence 4899999999999999999998875 788887653 22110 1110000 00111112245788999999
Q ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 85 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
||++++.... +..+....|.....++++++++.+-+ ++|.+|.
T Consensus 68 Vi~~~~~~~~---~~~~~~~~~~~~~~~l~~aa~~~gvk--r~I~~Ss 110 (317)
T CHL00194 68 IIDASTSRPS---DLYNAKQIDWDGKLALIEAAKAAKIK--RFIFFSI 110 (317)
T ss_pred EEECCCCCCC---CccchhhhhHHHHHHHHHHHHHcCCC--EEEEecc
Confidence 9998754321 12234567888889999999887542 5666554
No 95
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.52 E-value=7.5e-08 Score=84.12 Aligned_cols=159 Identities=16% Similarity=0.214 Sum_probs=100.3
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhh-------hhhhhhhhccCCcccEEEeCChhhhcC
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-------VKMELVDAAFPLLKGVVATTDAVEACT 80 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g-------~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (300)
|+|+||+|++|++++..|+.++. +++.+...+..+.... ...|+.+.. ...+.++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~-----------~~~~~~~ 62 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-------EVIVLSRSSNSESFEEKKLNVEFVIGDLTDKE-----------QLEKLLE 62 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-------EEEEEESCSTGGHHHHHHTTEEEEESETTSHH-----------HHHHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-------ccccccccccccccccccceEEEEEeeccccc-----------ccccccc
Confidence 78999999999999999998875 4443433322221110 012222211 3455566
Q ss_pred CC--cEEEEeCCCCC--CCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH--CCCCC--CCc
Q 022227 81 GV--NIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF--APSIP--AKN 152 (300)
Q Consensus 81 ~a--DvVi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~--~~~~p--~~~ 152 (300)
+. |.||++|+... ....+..+....|+...+++.+.+.+... .++|+.|. ..+.... ... ....+ +..
T Consensus 63 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~i~~sS-~~~y~~~-~~~~~~e~~~~~~~~ 138 (236)
T PF01370_consen 63 KANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGV--KRFIFLSS-ASVYGDP-DGEPIDEDSPINPLS 138 (236)
T ss_dssp HHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEE-GGGGTSS-SSSSBETTSGCCHSS
T ss_pred ccCceEEEEeeccccccccccccccccccccccccccccccccccc--cccccccc-ccccccc-ccccccccccccccc
Confidence 66 99999998753 11134567788999999999999999864 26677665 3211000 000 00001 112
Q ss_pred EEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 153 ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 153 i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
.++.++...+++...++++.+++...++...|+|.+
T Consensus 139 ~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 139 PYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccc
Confidence 355667777777777888889999999999999977
No 96
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.52 E-value=9e-07 Score=80.52 Aligned_cols=166 Identities=22% Similarity=0.293 Sum_probs=95.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh-hhh------hhhhhhc-c------CCcccEEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVK------MELVDAA-F------PLLKGVVA 71 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~-g~~------~dl~~~~-~------~~~~~v~~ 71 (300)
.||+|+| +|.+|..++..++..|+ +++++|+++ ++++ +.. ..+.+.. . ....+++.
T Consensus 4 ~kI~VIG-~G~mG~~ia~~la~~g~-------~V~~~d~~~--~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~ 73 (282)
T PRK05808 4 QKIGVIG-AGTMGNGIAQVCAVAGY-------DVVMVDISD--AAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG 73 (282)
T ss_pred cEEEEEc-cCHHHHHHHHHHHHCCC-------ceEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE
Confidence 4899999 79999999999998875 699999864 3332 110 0111100 0 01235666
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCC----
Q 022227 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS---- 147 (300)
Q Consensus 72 ~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~---- 147 (300)
+++. +++++||+||.+. ..+....+++.+.+.+++++++ +++||.+......+.+....
T Consensus 74 ~~~~-~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~--il~s~ts~~~~~~la~~~~~~~r~ 136 (282)
T PRK05808 74 TTDL-DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEA--ILATNTSSLSITELAAATKRPDKV 136 (282)
T ss_pred eCCH-HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHHhhCCCcce
Confidence 7665 5689999999984 2334556678888888887775 33666655333233332110
Q ss_pred ------CCCCc-----E--EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeecccee
Q 022227 148 ------IPAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHAT 200 (300)
Q Consensus 148 ------~p~~~-----i--~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~ 200 (300)
.|... + +..|.-+.......+.+.+|..|..+... -|+-++ -+++.++.+.
T Consensus 137 ig~h~~~P~~~~~~vev~~g~~t~~e~~~~~~~l~~~lGk~pv~~~d~--~g~i~~Ri~~~~~~ea~ 201 (282)
T PRK05808 137 IGMHFFNPVPVMKLVEIIRGLATSDATHEAVEALAKKIGKTPVEVKNA--PGFVVNRILIPMINEAI 201 (282)
T ss_pred EEeeccCCcccCccEEEeCCCCCCHHHHHHHHHHHHHcCCeeEEecCc--cChHHHHHHHHHHHHHH
Confidence 12211 2 22344455445556667888777555322 354444 4445554443
No 97
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.47 E-value=7.2e-07 Score=81.26 Aligned_cols=152 Identities=15% Similarity=0.179 Sum_probs=93.9
Q ss_pred EEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC--CCcEEE
Q 022227 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVNIAV 86 (300)
Q Consensus 9 ~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~--~aDvVi 86 (300)
.||||+||||++++..|+..+. +++++... ...|+.+.. +..+.++ ++|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~-------~v~~~~~~--------~~~Dl~~~~-----------~l~~~~~~~~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF-------TNLVLRTH--------KELDLTRQA-----------DVEAFFAKEKPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC-------cEEEeecc--------ccCCCCCHH-----------HHHHHHhccCCCEEE
Confidence 4899999999999999987763 34444321 123454432 2333334 579999
Q ss_pred EeCCCCCC---CCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH----HHHHHHC----CCCCCCcEEe
Q 022227 87 MVGGFPRK---EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFA----PSIPAKNITC 155 (300)
Q Consensus 87 ~~ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~----~~~~~~~----~~~p~~~i~~ 155 (300)
|+|+.... ......+....|.....++++.+++...+ ++|++|+.. +.. .-..+.. +.-|....++
T Consensus 55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~i~~SS~~-vyg~~~~~~~~E~~~~~~~~~p~~~~Y~ 131 (306)
T PLN02725 55 LAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVK--KLLFLGSSC-IYPKFAPQPIPETALLTGPPEPTNEWYA 131 (306)
T ss_pred EeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCC--eEEEeCcee-ecCCCCCCCCCHHHhccCCCCCCcchHH
Confidence 99986431 12234567888999999999999987532 466665421 100 0000100 1111112366
Q ss_pred eehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 156 ~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
.++....++...+.+..+++...++...|+|.+.
T Consensus 132 ~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~ 165 (306)
T PLN02725 132 IAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHD 165 (306)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 6777666666666777899988898888899753
No 98
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.47 E-value=3.6e-06 Score=78.64 Aligned_cols=114 Identities=20% Similarity=0.219 Sum_probs=75.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh--------hhhhhccC--CcccEEEeCCh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM--------ELVDAAFP--LLKGVVATTDA 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~--------dl~~~~~~--~~~~v~~~~~~ 75 (300)
|||+|+| +|+||...+-.|++.|. +++.+|+++ ++.+.... .|++.... ...++..|+|.
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GH-------eVv~vDid~--~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~ 70 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGH-------EVVCVDIDE--SKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDY 70 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCH
Confidence 6999999 89999999988888763 899999975 44332110 11111111 12458899999
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEe--cCchhh
Q 022227 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV--ANPANT 136 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~--sNP~~~ 136 (300)
.+|++++|++|++-|.|.++.-+ .+...+...++.|.++-++.. +||. |=|+..
T Consensus 71 ~~a~~~adv~fIavgTP~~~dg~------aDl~~V~ava~~i~~~~~~~~-vvV~KSTVPvGt 126 (414)
T COG1004 71 EEAVKDADVVFIAVGTPPDEDGS------ADLSYVEAVAKDIGEILDGKA-VVVIKSTVPVGT 126 (414)
T ss_pred HHHHhcCCEEEEEcCCCCCCCCC------ccHHHHHHHHHHHHhhcCCCe-EEEEcCCCCCCc
Confidence 99999999999999988765221 234566667777766655333 4443 335543
No 99
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.44 E-value=2.2e-07 Score=80.25 Aligned_cols=158 Identities=18% Similarity=0.243 Sum_probs=107.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh----hhhhhhhhhcc---------------CC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN----GVKMELVDAAF---------------PL 65 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~----g~~~dl~~~~~---------------~~ 65 (300)
.+.|+|+| +|.+|+.+|...++.|+ .+.|+|.++ +.|. +....+.+.+. ..
T Consensus 11 ~~~V~ivG-aG~MGSGIAQv~a~sg~-------~V~l~d~~~--~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~ 80 (298)
T KOG2304|consen 11 IKNVAIVG-AGQMGSGIAQVAATSGL-------NVWLVDANE--DALSRATKAISSSLKRVAKKKKADDPVALEEFVDDT 80 (298)
T ss_pred ccceEEEc-ccccchhHHHHHHhcCC-------ceEEecCCH--HHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHH
Confidence 45799999 79999999999998886 799999975 3332 12112211110 01
Q ss_pred cccEEEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh-hHHHHHHHH
Q 022227 66 LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN-TNALILKEF 144 (300)
Q Consensus 66 ~~~v~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~-~~~~~~~~~ 144 (300)
+.++..+++...+++|||+||.+ +-+|+++.+++.+.+++.|++++ |..||.+. .++.++.-.
T Consensus 81 l~ri~~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~--il~tNTSSl~lt~ia~~~ 144 (298)
T KOG2304|consen 81 LDRIKTSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST--ILATNTSSLSLTDIASAT 144 (298)
T ss_pred HHHHHHcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce--EEeecccceeHHHHHhhc
Confidence 34566778888999999988665 67899999999999999998764 77888864 344433221
Q ss_pred C-----CCC----CC------CcE-EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC
Q 022227 145 A-----PSI----PA------KNI-TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS 190 (300)
Q Consensus 145 ~-----~~~----p~------~~i-~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~ 190 (300)
. .|+ |. +.| ...|.-++-.+...+++.+|..+...+..+ |+.-+
T Consensus 145 ~~~srf~GlHFfNPvPvMKLvEVir~~~TS~eTf~~l~~f~k~~gKttVackDtp--GFIVN 204 (298)
T KOG2304|consen 145 QRPSRFAGLHFFNPVPVMKLVEVIRTDDTSDETFNALVDFGKAVGKTTVACKDTP--GFIVN 204 (298)
T ss_pred cChhhhceeeccCCchhHHHhhhhcCCCCCHHHHHHHHHHHHHhCCCceeecCCC--chhhh
Confidence 0 111 11 123 334666676777788999999888888765 76544
No 100
>PRK05865 hypothetical protein; Provisional
Probab=98.43 E-value=2.2e-06 Score=88.41 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=70.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh----hhhhhhhhhccCCcccEEEeCChhhhcCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN----GVKMELVDAAFPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~----g~~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (300)
|||.|+||+|++|++++..|+..|. +++.+|.... +... ....|+.+ ..+..+++++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~-------~Vv~l~R~~~-~~~~~~v~~v~gDL~D-----------~~~l~~al~~ 61 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH-------EVVGIARHRP-DSWPSSADFIAADIRD-----------ATAVESAMTG 61 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCch-hhcccCceEEEeeCCC-----------HHHHHHHHhC
Confidence 4899999999999999999998775 7888887531 1111 01112221 1244567889
Q ss_pred CcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCch
Q 022227 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (300)
Q Consensus 82 aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~ 134 (300)
+|+|||+|+... + ....|+....++++.+.+.+. . ++|++|++.
T Consensus 62 vD~VVHlAa~~~-~------~~~vNv~GT~nLLeAa~~~gv-k-r~V~iSS~~ 105 (854)
T PRK05865 62 ADVVAHCAWVRG-R------NDHINIDGTANVLKAMAETGT-G-RIVFTSSGH 105 (854)
T ss_pred CCEEEECCCccc-c------hHHHHHHHHHHHHHHHHHcCC-C-eEEEECCcH
Confidence 999999997542 1 356799999999999988753 2 677788765
No 101
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.43 E-value=1.5e-06 Score=72.25 Aligned_cols=97 Identities=20% Similarity=0.253 Sum_probs=65.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc---c---CCcccEEEeCChhhhcC
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---F---PLLKGVVATTDAVEACT 80 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~---~---~~~~~v~~~~~~~~a~~ 80 (300)
||+|+| +|..|.++|..|...+. +|.|+++++ +.++... -.+.. + .+..++.+++|+.++++
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~-------~V~l~~~~~--~~~~~i~--~~~~n~~~~~~~~l~~~i~~t~dl~~a~~ 68 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGH-------EVTLWGRDE--EQIEEIN--ETRQNPKYLPGIKLPENIKATTDLEEALE 68 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTE-------EEEEETSCH--HHHHHHH--HHTSETTTSTTSBEETTEEEESSHHHHHT
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC-------EEEEEeccH--HHHHHHH--HhCCCCCCCCCcccCcccccccCHHHHhC
Confidence 899999 79999999999998874 899999863 3332211 11211 1 12357888999999999
Q ss_pred CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEec
Q 022227 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~s 131 (300)
+||+||++- | ....+++++.+..+-+++..+|.++
T Consensus 69 ~ad~Iiiav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~ 103 (157)
T PF01210_consen 69 DADIIIIAV--P--------------SQAHREVLEQLAPYLKKGQIIISAT 103 (157)
T ss_dssp T-SEEEE-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred cccEEEecc--c--------------HHHHHHHHHHHhhccCCCCEEEEec
Confidence 999999872 2 1334677788888765555555544
No 102
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.41 E-value=4.2e-06 Score=82.28 Aligned_cols=150 Identities=16% Similarity=0.212 Sum_probs=90.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhh---hhhhhh-----hcc------CCcccE
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV---KMELVD-----AAF------PLLKGV 69 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~---~~dl~~-----~~~------~~~~~v 69 (300)
+..||+|+| +|.+|+.++..++..|+ +|+++|+++ +.++.. ..+..+ ... ....++
T Consensus 6 ~i~~V~VIG-aG~MG~gIA~~la~aG~-------~V~l~D~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i 75 (507)
T PRK08268 6 SIATVAVIG-AGAMGAGIAQVAAQAGH-------TVLLYDARA--GAAAAARDGIAARLAKLVEKGKLTAEQADAALARL 75 (507)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 457899999 79999999999998876 899999974 444321 111111 000 112456
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh-HHHHHHHHC-C-
Q 022227 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P- 146 (300)
Q Consensus 70 ~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~-~~~~~~~~~-~- 146 (300)
+.+++. +++++||+||.+. -++..+.+.+...+++.+++++ |++||.+.+ .+.+..... +
T Consensus 76 ~~~~~~-~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~a--ilasntStl~i~~la~~~~~p~ 138 (507)
T PRK08268 76 RPVEAL-ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDC--ILATNTSSLSITAIAAALKHPE 138 (507)
T ss_pred EEeCCH-HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHhhcCCcc
Confidence 777775 5689999999973 2345555666677888887675 555665432 223322221 1
Q ss_pred ---C---C-CCC--c---EEee--ehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 147 ---S---I-PAK--N---ITCL--TRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 147 ---~---~-p~~--~---i~~~--t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
+ + |.. + +.++ |.-++......+++.+|..|.-|.
T Consensus 139 r~~G~hff~Pa~v~~LvEvv~g~~Ts~~~~~~~~~l~~~lgk~pv~v~ 186 (507)
T PRK08268 139 RVAGLHFFNPVPLMKLVEVVSGLATDPAVADALYALARAWGKTPVRAK 186 (507)
T ss_pred cEEEEeecCCcccCeeEEEeCCCCCCHHHHHHHHHHHHHcCCceEEec
Confidence 1 1 221 2 2232 556665556677888997775443
No 103
>PRK09135 pteridine reductase; Provisional
Probab=98.41 E-value=5.4e-06 Score=72.92 Aligned_cols=154 Identities=12% Similarity=0.090 Sum_probs=85.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC----CcccEEEeCChhhh
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTDAVEA 78 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~----~~~~v~~~~~~~~a 78 (300)
++.++|.|+||+|++|++++..|+..|. ++++++... .+.++....++.+.... ...+++-..+...+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 75 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGY-------RVAIHYHRS-AAEADALAAELNALRPGSAAALQADLLDPDALPEL 75 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHH
Confidence 3457899999999999999999998775 788888642 23333222233221100 00111111111222
Q ss_pred c-------CCCcEEEEeCCCCCCC---C---CcHHHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEecCchhhHHHHHHHH
Q 022227 79 C-------TGVNIAVMVGGFPRKE---G---MERKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 79 ~-------~~aDvVi~~ag~~~~~---g---~~r~dl~~~N~~i~~~i~~~i~~~~~-~~~~viv~sNP~~~~~~~~~~~ 144 (300)
+ ...|+||++||..... . .+..+.+..|+.....+.+.+.++-. ....++..++ .. ..
T Consensus 76 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~-~~-------~~ 147 (249)
T PRK09135 76 VAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD-IH-------AE 147 (249)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC-hh-------hc
Confidence 2 3579999999863211 1 12244677888877777777654321 1223443332 11 11
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...++...++.++.....+...++++++
T Consensus 148 -~~~~~~~~Y~~sK~~~~~~~~~l~~~~~ 175 (249)
T PRK09135 148 -RPLKGYPVYCAAKAALEMLTRSLALELA 175 (249)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHHHC
Confidence 2233344577777777777777777764
No 104
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.38 E-value=3.5e-06 Score=77.02 Aligned_cols=106 Identities=16% Similarity=0.233 Sum_probs=65.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhh--------hhccC------Cccc
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV--------DAAFP------LLKG 68 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~--------~~~~~------~~~~ 68 (300)
++.+||+|+| +|.+|..++..|+..|. +|+++|.++ +.++.....+. ....+ ...+
T Consensus 2 ~~~~kI~vIG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~ 71 (292)
T PRK07530 2 MAIKKVGVIG-AGQMGNGIAHVCALAGY-------DVLLNDVSA--DRLEAGLATINGNLARQVAKGKISEEARAAALAR 71 (292)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhC
Confidence 3456999999 79999999999998774 799999864 33332111111 01000 1134
Q ss_pred EEEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 69 VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 69 v~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
++.+++. +++++||+||.+. | .+....+.+.+.+.+.+++++ +++||.+.
T Consensus 72 i~~~~~~-~~~~~aD~Vieav--p------------e~~~~k~~~~~~l~~~~~~~~--ii~s~ts~ 121 (292)
T PRK07530 72 ISTATDL-EDLADCDLVIEAA--T------------EDETVKRKIFAQLCPVLKPEA--ILATNTSS 121 (292)
T ss_pred eEeeCCH-HHhcCCCEEEEcC--c------------CCHHHHHHHHHHHHhhCCCCc--EEEEcCCC
Confidence 6666665 6799999999984 1 112333455566777776665 33455543
No 105
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.36 E-value=8.1e-06 Score=74.73 Aligned_cols=104 Identities=24% Similarity=0.289 Sum_probs=64.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh-------hhhhhcc-------CCcccEE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-------ELVDAAF-------PLLKGVV 70 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~-------dl~~~~~-------~~~~~v~ 70 (300)
.+||+|+| +|.+|+.++..|+..|+ +|+++|.++ ++++.... ++.+... .....+.
T Consensus 4 ~~~V~vIG-~G~mG~~iA~~l~~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 73 (295)
T PLN02545 4 IKKVGVVG-AGQMGSGIAQLAAAAGM-------DVWLLDSDP--AALSRGLDSISSSLARLVKKGKMSQEEADATLGRIR 73 (295)
T ss_pred cCEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceE
Confidence 46899999 79999999999998774 799999864 33321100 1111000 0112344
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 71 ~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
.+++. +++++||+||.+. ..+..+...+.+.+.+..++++ |++||.+.
T Consensus 74 ~~~~~-~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~--il~s~tS~ 121 (295)
T PLN02545 74 CTTNL-EELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSA--ILASNTSS 121 (295)
T ss_pred eeCCH-HHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCc--EEEECCCC
Confidence 55554 6799999999984 2233444566666777776665 44455544
No 106
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.36 E-value=5e-06 Score=75.97 Aligned_cols=104 Identities=16% Similarity=0.287 Sum_probs=66.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhh-------hhhh----cc------CCcc
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-------LVDA----AF------PLLK 67 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~d-------l~~~----~~------~~~~ 67 (300)
..||+|+| +|.+|..++..|+..|. +|+++|.++ +.++..... +... .. ....
T Consensus 3 i~~I~ViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~ 72 (291)
T PRK06035 3 IKVIGVVG-SGVMGQGIAQVFARTGY-------DVTIVDVSE--EILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMA 72 (291)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHh
Confidence 35899999 79999999999998875 799999874 333311110 1100 00 0123
Q ss_pred cEEEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 68 GVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 68 ~v~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
++..+++. +++++||+||.+.. .+.+..+++.+.+.+++++++ |++||.+.
T Consensus 73 ~i~~~~~~-~~~~~aDlVieav~--------------e~~~~k~~~~~~l~~~~~~~~--il~S~tsg 123 (291)
T PRK06035 73 RIRTSTSY-ESLSDADFIVEAVP--------------EKLDLKRKVFAELERNVSPET--IIASNTSG 123 (291)
T ss_pred CcEeeCCH-HHhCCCCEEEEcCc--------------CcHHHHHHHHHHHHhhCCCCe--EEEEcCCC
Confidence 45555665 67999999999841 233555677777888877665 34566553
No 107
>PRK06194 hypothetical protein; Provisional
Probab=98.34 E-value=5.5e-06 Score=74.91 Aligned_cols=162 Identities=17% Similarity=0.124 Sum_probs=92.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhhcC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEACT 80 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a~~ 80 (300)
+.++|.||||+|++|++++..|++.|. +|+++|.+. +.++....++...... ...++.-..+..++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 75 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-------KLVLADVQQ--DALDRAVAELRAQGAEVLGVRTDVSDAAQVEALAD 75 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 457899999999999999999998875 788999853 3343333333221100 0011111112222222
Q ss_pred -------CCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHH----HhhhcCC----CeEEEEecCchhhHHH
Q 022227 81 -------GVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASA----LEQHAAP----NCKVLVVANPANTNAL 139 (300)
Q Consensus 81 -------~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~----i~~~~~~----~~~viv~sNP~~~~~~ 139 (300)
..|+||++||..... ..+. ...+..|+.....+.+. +.+.+.+ ...+|++|+....
T Consensus 76 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--- 152 (287)
T PRK06194 76 AALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL--- 152 (287)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc---
Confidence 469999999875421 1122 23466676655555444 5544421 1356666553321
Q ss_pred HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEE
Q 022227 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (300)
Q Consensus 140 ~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~ 183 (300)
.+.|....++.++.-...+...+++.++.....|+...
T Consensus 153 ------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~ 190 (287)
T PRK06194 153 ------LAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASV 190 (287)
T ss_pred ------cCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 12233335677777777778888888887766776443
No 108
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.34 E-value=3e-06 Score=72.42 Aligned_cols=108 Identities=19% Similarity=0.263 Sum_probs=62.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh---hhhhh-----ccC-C-cccEEEeCCh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDA-----AFP-L-LKGVVATTDA 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~---dl~~~-----~~~-~-~~~v~~~~~~ 75 (300)
|||+|+| .|++|..+|..|+..|. +++-+|+++ ++.+.... .+.+. ... . ..++..+++.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~-------~V~g~D~~~--~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~ 70 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGH-------QVIGVDIDE--EKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDI 70 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS-------EEEEE-S-H--HHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEH
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCC-------EEEEEeCCh--HHHHHHhhccccccccchhhhhccccccccchhhhhh
Confidence 6999999 89999999999999885 799999974 44332211 11100 000 1 2578888899
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEe
Q 022227 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV 130 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~ 130 (300)
.+++++||++|++.+.|..++.+ .+...+.+.++.|.++..++. +|++
T Consensus 71 ~~ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~-lvV~ 118 (185)
T PF03721_consen 71 EEAIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGD-LVVI 118 (185)
T ss_dssp HHHHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCE-EEEE
T ss_pred hhhhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcc-eEEE
Confidence 99999999999998877655321 123344455555555544443 4444
No 109
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.34 E-value=4.4e-06 Score=76.27 Aligned_cols=167 Identities=17% Similarity=0.236 Sum_probs=92.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh---hhhhhc-----c------CCcccEEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAA-----F------PLLKGVVA 71 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~---dl~~~~-----~------~~~~~v~~ 71 (300)
.||+|+| +|.+|..++..|+..|. +|+++|+++ ++++.... ++.+.. . ....+++.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 71 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVSGF-------QTTLVDIKQ--EQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY 71 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhCCC-------cEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE
Confidence 5899999 79999999999998775 799999964 34432111 111100 0 01234667
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCC----
Q 022227 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS---- 147 (300)
Q Consensus 72 ~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~---- 147 (300)
+++..+++++||+||.+.. .+..+.+.+...+.+++++++ ++++|.+.+-...+.+....
T Consensus 72 ~~~~~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~--il~~~tSt~~~~~l~~~~~~~~r~ 135 (288)
T PRK09260 72 SLDLKAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAEC--YIATNTSTMSPTEIASFTKRPERV 135 (288)
T ss_pred eCcHHHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhhcCCcccE
Confidence 7788889999999999842 122334455556777777665 33344332111112222111
Q ss_pred ------CCCC--c---EEee--ehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeecccee
Q 022227 148 ------IPAK--N---ITCL--TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHAT 200 (300)
Q Consensus 148 ------~p~~--~---i~~~--t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a~ 200 (300)
.|.. + +.++ |.-+.......+.+.+|..|.-+... -|.-.+ -+.+.+..+.
T Consensus 136 ~g~h~~~Pv~~~~Lve~v~g~~t~~~~~~~~~~~l~~lg~~~v~v~d~--~Gf~~nRl~~~~~~ea~ 200 (288)
T PRK09260 136 IAMHFFNPVHKMKLVELIRGLETSDETVQVAKEVAEQMGKETVVVNEF--PGFVTSRISALVGNEAF 200 (288)
T ss_pred EEEecCCCcccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEecCc--ccHHHHHHHHHHHHHHH
Confidence 1222 1 2222 45555444556667788766544322 244444 3445555553
No 110
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.33 E-value=3.2e-06 Score=83.38 Aligned_cols=118 Identities=12% Similarity=0.075 Sum_probs=73.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-----c-c--C----CcccEEE
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-----A-F--P----LLKGVVA 71 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-----~-~--~----~~~~v~~ 71 (300)
+.+.|+|+||+|++|++++..|+..|. +|++++++. +++.....++.+. . . . ...++.-
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~-------~Vval~Rn~--ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD 149 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSA--QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK 149 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhhhhccccccccccCceEEEEecCCC
Confidence 346899999999999999999998775 688887753 3443222222110 0 0 0 0011111
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 72 ~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
..+..+++.++|+||+++|.......+-...+..|....+++++++.+.+- + ++|++|.
T Consensus 150 ~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agV-g-RIV~VSS 208 (576)
T PLN03209 150 PDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKV-N-HFILVTS 208 (576)
T ss_pred HHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCC-C-EEEEEcc
Confidence 113445688999999999875432222233466788889999999887753 2 5666664
No 111
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.32 E-value=3.1e-06 Score=76.46 Aligned_cols=147 Identities=16% Similarity=0.240 Sum_probs=89.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC--cE
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV--NI 84 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a--Dv 84 (300)
||+|+||+|++|++++..|+..|. ++++++.. ..|+.+.. +..++++++ |+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~-------~v~~~~r~---------~~d~~~~~-----------~~~~~~~~~~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR-------VVVALTSS---------QLDLTDPE-----------ALERLLRAIRPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC-------EEEEeCCc---------ccCCCCHH-----------HHHHHHHhCCCCE
Confidence 689999999999999999998764 78888753 13444332 345556655 99
Q ss_pred EEEeCCCCCCCC--CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----HHHHHCCCCCCCcEEeeeh
Q 022227 85 AVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLTR 158 (300)
Q Consensus 85 Vi~~ag~~~~~g--~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----~~~~~~~~~p~~~i~~~t~ 158 (300)
||++|+...... .........|+....++++.+.+.. .++|++|... +... ...+. ....+...++.++
T Consensus 54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~Ss~~-vy~~~~~~~~~E~-~~~~~~~~Y~~~K 128 (287)
T TIGR01214 54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG---ARLVHISTDY-VFDGEGKRPYRED-DATNPLNVYGQSK 128 (287)
T ss_pred EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEeeee-eecCCCCCCCCCC-CCCCCcchhhHHH
Confidence 999998653221 2345567889999999999988764 2566666421 0000 00000 0000112344444
Q ss_pred hhHHHHHHHHHHHcCCCCCCeEEEEEecCCC
Q 022227 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 159 ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg 189 (300)
...++ +.+.++.+..-++...|+|.+.
T Consensus 129 ~~~E~----~~~~~~~~~~ilR~~~v~G~~~ 155 (287)
T TIGR01214 129 LAGEQ----AIRAAGPNALIVRTSWLYGGGG 155 (287)
T ss_pred HHHHH----HHHHhCCCeEEEEeeecccCCC
Confidence 43333 3344467777777777788764
No 112
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.31 E-value=3.1e-06 Score=71.36 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=64.6
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEEE
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM 87 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi~ 87 (300)
|+|+||+|++|+.++..|++++. +|+++-+++ ++++. ...+.- ...++.-..+..++++++|.||+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-------~V~~~~R~~--~~~~~-~~~~~~----~~~d~~d~~~~~~al~~~d~vi~ 66 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-------EVTALVRSP--SKAED-SPGVEI----IQGDLFDPDSVKAALKGADAVIH 66 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-------EEEEEESSG--GGHHH-CTTEEE----EESCTTCHHHHHHHHTTSSEEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhccc-cccccc----ceeeehhhhhhhhhhhhcchhhh
Confidence 78999999999999999999873 788877653 33321 000000 00011011245788999999999
Q ss_pred eCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 88 VGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 88 ~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
++|.+.+ ....++.+++++++.+.+ +++++|.
T Consensus 67 ~~~~~~~-----------~~~~~~~~~~a~~~~~~~--~~v~~s~ 98 (183)
T PF13460_consen 67 AAGPPPK-----------DVDAAKNIIEAAKKAGVK--RVVYLSS 98 (183)
T ss_dssp CCHSTTT-----------HHHHHHHHHHHHHHTTSS--EEEEEEE
T ss_pred hhhhhcc-----------cccccccccccccccccc--cceeeec
Confidence 9876543 167788899999887543 5666654
No 113
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.30 E-value=2.9e-06 Score=76.61 Aligned_cols=98 Identities=21% Similarity=0.313 Sum_probs=66.7
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEEE
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM 87 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi~ 87 (300)
|.|+||+|++|++++..|+..|+ +|+.+++++. .......+ .. ..+.. ....++++++|+|||
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~--~~-----~~~~~-~~~~~~~~~~D~Vvh 63 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH-------EVTILTRSPP--AGANTKWE--GY-----KPWAP-LAESEALEGADAVIN 63 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC-------EEEEEeCCCC--CCCcccce--ee-----ecccc-cchhhhcCCCCEEEE
Confidence 57999999999999999998764 7888887642 11111000 00 00001 234567899999999
Q ss_pred eCCCCCCCC-C---cHHHHHHhhHHHHHHHHHHHhhhcC
Q 022227 88 VGGFPRKEG-M---ERKDVMSKNVSIYKAQASALEQHAA 122 (300)
Q Consensus 88 ~ag~~~~~g-~---~r~dl~~~N~~i~~~i~~~i~~~~~ 122 (300)
+|+.+...+ . ...++...|+...+++++.+.+.+.
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 102 (292)
T TIGR01777 64 LAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ 102 (292)
T ss_pred CCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence 998754322 1 2345677899999999999998754
No 114
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.29 E-value=1e-05 Score=74.54 Aligned_cols=105 Identities=14% Similarity=0.257 Sum_probs=64.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc---c------CCcccEEEeCCh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---F------PLLKGVVATTDA 75 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~---~------~~~~~v~~~~~~ 75 (300)
.+||+|+| +|.+|..++..|+..|+ +++++|.++ +.++.....+.... . ....+++.+++.
T Consensus 4 ~~~I~vIG-aG~mG~~iA~~l~~~g~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 73 (311)
T PRK06130 4 IQNLAIIG-AGTMGSGIAALFARKGL-------QVVLIDVME--GALERARGVIERALGVYAPLGIASAGMGRIRMEAGL 73 (311)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCH
Confidence 46899999 79999999999998764 799999864 33332211111000 0 012335566677
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
.+++++||+||++.- ........+.+.+....++++ +++||.+.
T Consensus 74 ~~~~~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~--ii~s~tsg 117 (311)
T PRK06130 74 AAAVSGADLVIEAVP--------------EKLELKRDVFARLDGLCDPDT--IFATNTSG 117 (311)
T ss_pred HHHhccCCEEEEecc--------------CcHHHHHHHHHHHHHhCCCCc--EEEECCCC
Confidence 778999999999841 112333455555666665554 44455543
No 115
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.27 E-value=7.3e-06 Score=80.46 Aligned_cols=167 Identities=22% Similarity=0.249 Sum_probs=100.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh-------hhhh-hcc------CCcccE
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-------ELVD-AAF------PLLKGV 69 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~-------dl~~-~~~------~~~~~v 69 (300)
+..||+||| +|.+|+.++..++..|+ +++++|+++ ++++.... .+.. ... ....++
T Consensus 4 ~~~kV~VIG-aG~MG~gIA~~la~aG~-------~V~l~d~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i 73 (503)
T TIGR02279 4 NVVTVAVIG-AGAMGAGIAQVAASAGH-------QVLLYDIRA--EALARAIAGIEARLNSLVTKGKLTAEECERTLKRL 73 (503)
T ss_pred CccEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc
Confidence 346899999 79999999999998875 799999974 44431100 0110 000 113456
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh-HHHHHHHHC-C-
Q 022227 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P- 146 (300)
Q Consensus 70 ~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~-~~~~~~~~~-~- 146 (300)
+.++++ +++++||+||.+. .++..+.+.+...+.+.+++++ |++||.+.. .+.++.... +
T Consensus 74 ~~~~~~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~--IlasnTStl~i~~iA~~~~~p~ 136 (503)
T TIGR02279 74 IPVTDL-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADT--IIASNTSSLSITAIAAGLARPE 136 (503)
T ss_pred EEeCCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe--EEEECCCCCCHHHHHHhcCccc
Confidence 777776 6789999999973 2345666677777888888764 677777653 233333321 1
Q ss_pred ---C---C-CCC--c---EEee--ehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC-ceeeeccce
Q 022227 147 ---S---I-PAK--N---ITCL--TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHA 199 (300)
Q Consensus 147 ---~---~-p~~--~---i~~~--t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~-~~~p~~s~a 199 (300)
+ + |.. + +.++ |.-++......+.+.+|..|.-+... -|..++ -+.+.++.+
T Consensus 137 r~~G~HFf~Papv~~LvEvv~g~~Ts~e~~~~~~~l~~~lgk~pv~v~d~--pGfi~Nrl~~~~~~EA 202 (503)
T TIGR02279 137 RVAGLHFFNPAPVMALVEVVSGLATAAEVAEQLYETALAWGKQPVHCHST--PGFIVNRVARPYYAEA 202 (503)
T ss_pred ceEEEeccCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeeeEeCCC--CCcHHHHHHHHHHHHH
Confidence 1 1 222 2 2233 55666556667788999877655422 354444 233344444
No 116
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.24 E-value=1.2e-05 Score=78.86 Aligned_cols=105 Identities=17% Similarity=0.221 Sum_probs=68.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhh-------h---hhccCCcccEEEeCCh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL-------V---DAAFPLLKGVVATTDA 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl-------~---~~~~~~~~~v~~~~~~ 75 (300)
+||+||| +|.+|+.++..|+..|+ +|+++|.++ ++++.....+ . ........++..++++
T Consensus 5 ~kIavIG-~G~MG~~iA~~la~~G~-------~V~v~D~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~ 74 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFLLAGI-------DVAVFDPHP--EAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASL 74 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCH
Confidence 6899999 79999999999998875 799999964 3333211000 0 0000011246677788
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh
Q 022227 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~ 136 (300)
.+++++||+||.+. ..+..+.+.+.+.+.+.+++++ |+.||.+..
T Consensus 75 ~ea~~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~--iI~SsTsgi 119 (495)
T PRK07531 75 AEAVAGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA--LIGSSTSGF 119 (495)
T ss_pred HHHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc--EEEEcCCCC
Confidence 88999999999873 1223444555566777777664 566776653
No 117
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.20 E-value=1.5e-05 Score=70.21 Aligned_cols=155 Identities=19% Similarity=0.164 Sum_probs=80.8
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-c-CCcccEEEeCChh--
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAV-- 76 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~-~~~~~v~~~~~~~-- 76 (300)
|+.+.++|+|+||+|.+|+.++..|++.|. +++++++++ ++++....++.+.. . ....++.-..+..
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGA-------RVVVTDRNE--EAAERVAAEILAGGRAIAVAADVSDEADVEAA 71 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 666778999999999999999999998875 789998864 33332222222100 0 0000111011111
Q ss_pred -----hhcCCCcEEEEeCCCCCCCC----CcH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHHHHH
Q 022227 77 -----EACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILK 142 (300)
Q Consensus 77 -----~a~~~aDvVi~~ag~~~~~g----~~r---~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~~~~ 142 (300)
+.+...|+||+++|...... .+. .+.+..|+.....+.+.+.++.. +...+|++|.....
T Consensus 72 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------ 145 (251)
T PRK07231 72 VAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGL------ 145 (251)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc------
Confidence 12346799999998742111 111 33466676654444444443211 12356666653210
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+....++.++.-...+...++++++
T Consensus 146 ---~~~~~~~~y~~sk~~~~~~~~~~a~~~~ 173 (251)
T PRK07231 146 ---RPRPGLGWYNASKGAVITLTKALAAELG 173 (251)
T ss_pred ---CCCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 1122222234444444455566666654
No 118
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.19 E-value=9.3e-06 Score=74.20 Aligned_cols=166 Identities=14% Similarity=0.133 Sum_probs=91.9
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhh----cCCCc
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA----CTGVN 83 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a----~~~aD 83 (300)
|.||||+|++|++++..|...|.. ++.++|......++. .+.... ....+......... +.++|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~------~v~~~~~~~~~~~~~----~~~~~~--~~~d~~~~~~~~~~~~~~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT------DILVVDNLRDGHKFL----NLADLV--IADYIDKEDFLDRLEKGAFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc------eEEEEecCCCchhhh----hhhhee--eeccCcchhHHHHHHhhccCCCC
Confidence 579999999999999999987631 577777643222111 010000 00011111112121 25799
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH---HHHHHCCCCCCCcEEeeehhh
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL---ILKEFAPSIPAKNITCLTRLD 160 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~---~~~~~~~~~p~~~i~~~t~ld 160 (300)
+|||+|+.......+.......|+....++++.+.+.. .++|.+|+. .+... ...+..+-..+...++.++..
T Consensus 69 ~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~v~~SS~-~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~ 144 (314)
T TIGR02197 69 AIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG---IPFIYASSA-ATYGDGEAGFREGRELERPLNVYGYSKFL 144 (314)
T ss_pred EEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC---CcEEEEccH-HhcCCCCCCcccccCcCCCCCHHHHHHHH
Confidence 99999987543333445667889999999999998864 356666642 21100 000000001122345556665
Q ss_pred HHHHHHH-HHH-HcCCCCCCeEEEEEecCCC
Q 022227 161 HNRALGQ-ISE-KLNVQVSDVKNVIIWGNHS 189 (300)
Q Consensus 161 ~~R~~~~-la~-~l~v~~~~V~~~~V~G~hg 189 (300)
...+... .++ ..+++...++...|+|...
T Consensus 145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred HHHHHHHHhHhhccCCceEEEEEeeccCCCC
Confidence 5554332 222 3456777788888889763
No 119
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.17 E-value=2e-05 Score=72.66 Aligned_cols=104 Identities=21% Similarity=0.315 Sum_probs=64.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhh----h---hhhhhcc-------CCcccEEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK----M---ELVDAAF-------PLLKGVVA 71 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~----~---dl~~~~~-------~~~~~v~~ 71 (300)
+||+|+| +|.+|++++..|+..|+ +|+++|.++ +.++... . .+.+... ....++..
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~-------~V~v~d~~~--~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~ 72 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGH-------EVRLWDADP--AAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV 72 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCC-------eeEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE
Confidence 5899999 79999999999998875 799999864 3332110 0 0111100 11234667
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 72 ~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
++++.+++++||+|+.+. | .+....+.+.+.+.+..++++ ++.||...
T Consensus 73 ~~~~~~a~~~ad~Vi~av--p------------e~~~~k~~~~~~l~~~~~~~~--ii~ssts~ 120 (308)
T PRK06129 73 TDSLADAVADADYVQESA--P------------ENLELKRALFAELDALAPPHA--ILASSTSA 120 (308)
T ss_pred ECcHHHhhCCCCEEEECC--c------------CCHHHHHHHHHHHHHhCCCcc--eEEEeCCC
Confidence 778888899999999874 1 112233345555666666553 44566543
No 120
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.17 E-value=8.8e-06 Score=77.53 Aligned_cols=115 Identities=18% Similarity=0.157 Sum_probs=68.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhh--hhhhhhh--ccC-CcccEEEeCChhhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV--KMELVDA--AFP-LLKGVVATTDAVEA 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~--~~dl~~~--~~~-~~~~v~~~~~~~~a 78 (300)
+.+||.|+||+|++|++++..|+..|+ +|++++.+.. .+... ..++... ... ...++.-..+..++
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 129 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGY-------NVVAVAREKS--GIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKV 129 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEEechh--hccccchhhHHhhhcCCceEEEeeCCCHHHHHHH
Confidence 357999999999999999999998775 7888887531 11100 0011000 000 00111111234455
Q ss_pred cC----CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 79 CT----GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 79 ~~----~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
++ ++|+||++++.+.... .+....|.....++++.+++.+-+ ++|++|+
T Consensus 130 ~~~~~~~~D~Vi~~aa~~~~~~---~~~~~vn~~~~~~ll~aa~~~gv~--r~V~iSS 182 (390)
T PLN02657 130 LFSEGDPVDVVVSCLASRTGGV---KDSWKIDYQATKNSLDAGREVGAK--HFVLLSA 182 (390)
T ss_pred HHHhCCCCcEEEECCccCCCCC---ccchhhHHHHHHHHHHHHHHcCCC--EEEEEee
Confidence 55 5899999887532111 123456788888999998877532 4666664
No 121
>PRK12320 hypothetical protein; Provisional
Probab=98.17 E-value=8.7e-06 Score=82.40 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=65.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+||||+||+|++++..|+..|. +|+.+|..+. .......++.. .++.-. ...++++++|+|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~-------~Vi~ldr~~~--~~~~~~ve~v~------~Dl~d~-~l~~al~~~D~V 64 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH-------TVSGIAQHPH--DALDPRVDYVC------ASLRNP-VLQELAGEADAV 64 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCChh--hcccCCceEEE------ccCCCH-HHHHHhcCCCEE
Confidence 4899999999999999999998774 7888886431 11000000100 111111 234567899999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEec
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~s 131 (300)
||+|+... .. -...|+....++++.+++.+ +++|++|
T Consensus 65 IHLAa~~~--~~----~~~vNv~Gt~nLleAA~~~G---vRiV~~S 101 (699)
T PRK12320 65 IHLAPVDT--SA----PGGVGITGLAHVANAAARAG---ARLLFVS 101 (699)
T ss_pred EEcCccCc--cc----hhhHHHHHHHHHHHHHHHcC---CeEEEEE
Confidence 99997531 11 12468899999999998864 4666666
No 122
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.16 E-value=1.7e-05 Score=70.36 Aligned_cols=154 Identities=10% Similarity=0.040 Sum_probs=85.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchh----hhhhhhhhhhhhccCCcccEEEeCChh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE----ALNGVKMELVDAAFPLLKGVVATTDAV 76 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~----~l~g~~~dl~~~~~~~~~~v~~~~~~~ 76 (300)
|+.+.+++.|+||+|.+|..++..|+..|. +++++|.++... .......|+.+.... ..+ -....
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~--~~~--~~~~~ 70 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGA-------TVVVCGRRAPETVDGRPAEFHAADVRDPDQV--AAL--VDAIV 70 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCChhhhhcCCceEEEEccCCCHHHH--HHH--HHHHH
Confidence 555678999999999999999999998775 788888764110 000111222221100 000 00011
Q ss_pred hhcCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHHHhhhc---CCCeEEEEecCchhhHHHHHHHHCCC
Q 022227 77 EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEFAPS 147 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~---~~~~~viv~sNP~~~~~~~~~~~~~~ 147 (300)
+.+...|+||++||..... ..+ ....+..|+.....+.+.+.++- ....++|++|+-... .+
T Consensus 71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~---------~~ 141 (252)
T PRK07856 71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR---------RP 141 (252)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC---------CC
Confidence 2234569999999864321 111 23456677777766666654321 112467777653321 12
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHHcCC
Q 022227 148 IPAKNITCLTRLDHNRALGQISEKLNV 174 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~l~v 174 (300)
.|....++.++.-...+.+.++.+++-
T Consensus 142 ~~~~~~Y~~sK~a~~~l~~~la~e~~~ 168 (252)
T PRK07856 142 SPGTAAYGAAKAGLLNLTRSLAVEWAP 168 (252)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhcC
Confidence 232234566666666777778887763
No 123
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.15 E-value=3.1e-05 Score=67.87 Aligned_cols=103 Identities=14% Similarity=0.126 Sum_probs=62.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC--CcccEEEeCChhhhcCCCc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~--~~~~v~~~~~~~~a~~~aD 83 (300)
|||+||||+|.+|++++..|...|. ++.+++.++ ++++....+..+.... ...++.. ++..++++++|
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~-------~V~v~~r~~--~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aD 70 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN-------KIIIGSRDL--EKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRAD 70 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-------EEEEEEcCH--HHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCC
Confidence 5899998689999999999998763 788888853 4454433333221100 0112222 25568899999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
+||++.-. ..+.++++.+...-. +..+|-++||..
T Consensus 71 vVilavp~----------------~~~~~~l~~l~~~l~-~~vvI~~~ngi~ 105 (219)
T TIGR01915 71 VVILAVPW----------------DHVLKTLESLRDELS-GKLVISPVVPLA 105 (219)
T ss_pred EEEEECCH----------------HHHHHHHHHHHHhcc-CCEEEEeccCce
Confidence 99998521 112233333433322 235778899974
No 124
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.14 E-value=1.3e-05 Score=80.98 Aligned_cols=169 Identities=15% Similarity=0.161 Sum_probs=90.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHh--cccCCCCCCeEEEEEecCCchhhhhhhhhhhh-hhccCCcccEEE-----eCChhh
Q 022227 6 VRVLVTGAAGQIGYALVPMIAR--GVMLGTDQPVILHMLDIPPAAEALNGVKMELV-DAAFPLLKGVVA-----TTDAVE 77 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~--~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~-~~~~~~~~~v~~-----~~~~~~ 77 (300)
|||.||||+||+|++++..|+. .+. +|++++++.....+........ +.......++.- .....+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-------~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~ 73 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA-------TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIA 73 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC-------EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHH
Confidence 4899999999999999999984 332 7888887542222221110000 000000011100 001123
Q ss_pred hcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHC-CCC----CCCc
Q 022227 78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA-PSI----PAKN 152 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~-~~~----p~~~ 152 (300)
.++++|+|||+|+.... ..+..+....|+...+++++.+.+...+ +++.+|.. .+....-.... ..+ +...
T Consensus 74 ~l~~~D~Vih~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~~~~--~~v~~SS~-~v~g~~~~~~~e~~~~~~~~~~~ 149 (657)
T PRK07201 74 ELGDIDHVVHLAAIYDL-TADEEAQRAANVDGTRNVVELAERLQAA--TFHHVSSI-AVAGDYEGVFREDDFDEGQGLPT 149 (657)
T ss_pred HhcCCCEEEECceeecC-CCCHHHHHHHHhHHHHHHHHHHHhcCCC--eEEEEecc-ccccCccCccccccchhhcCCCC
Confidence 34899999999986432 2344566788999999999999887432 45555532 21100000000 000 0012
Q ss_pred EEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 153 ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 153 i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
.++.++...+++.. +..+++..-++...|+|.+
T Consensus 150 ~Y~~sK~~~E~~~~---~~~g~~~~ilRp~~v~G~~ 182 (657)
T PRK07201 150 PYHRTKFEAEKLVR---EECGLPWRVYRPAVVVGDS 182 (657)
T ss_pred chHHHHHHHHHHHH---HcCCCcEEEEcCCeeeecC
Confidence 24445555544332 2356776777776777854
No 125
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.14 E-value=4e-05 Score=67.26 Aligned_cols=152 Identities=15% Similarity=0.209 Sum_probs=81.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChh-----
Q 022227 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV----- 76 (300)
Q Consensus 2 ~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~----- 76 (300)
+++.+++.|+||+|++|+.++..|++.|. .+.+.+.+. ++++....++.........++.-..+..
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGA-------IVGLHGTRV--EKLEALAAELGERVKIFPANLSDRDEVKALGQK 73 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence 34567999999999999999999998874 577777642 3333222221100000000110000111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---C---CcHHHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEecCchhhHHHHHHHHC
Q 022227 77 --EACTGVNIAVMVGGFPRKE---G---MERKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 77 --~a~~~aDvVi~~ag~~~~~---g---~~r~dl~~~N~~i~~~i~~~i~~~---~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
+.+...|+||++||..... . ++-.+.+..|+.....+++.+.+. .. ...+|++|+....
T Consensus 74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~--------- 143 (245)
T PRK12936 74 AEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGV--------- 143 (245)
T ss_pred HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhC---------
Confidence 1245689999999874321 1 122345667777665555554322 12 2357777764431
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.|....++.++.....+.+.+++++
T Consensus 144 ~~~~~~~~Y~~sk~a~~~~~~~la~~~ 170 (245)
T PRK12936 144 TGNPGQANYCASKAGMIGFSKSLAQEI 170 (245)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 122322345555555555666666664
No 126
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.13 E-value=4.9e-05 Score=67.53 Aligned_cols=153 Identities=18% Similarity=0.122 Sum_probs=85.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhh-----
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE----- 77 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~----- 77 (300)
.+.+++.|+||+|++|.+++..|++.|. +++++|.+. ++++....++.........++.-..+..+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA-------RVVIADIKP--ARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAA 74 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence 3556899999999999999999998875 788998864 33332222221110000011111111112
Q ss_pred --hcCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHHHhhhc---CCCeEEEEecCchhhHHHHHHHHCC
Q 022227 78 --ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEFAP 146 (300)
Q Consensus 78 --a~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~---~~~~~viv~sNP~~~~~~~~~~~~~ 146 (300)
.+...|++|++||..... ..+ -.+.+..|+.....+.+.+.++- .++.++|++|..... .
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~ 145 (257)
T PRK07067 75 VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR---------R 145 (257)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC---------C
Confidence 234689999999864311 111 23346678777777776664431 112457777653321 1
Q ss_pred CCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 147 SIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 147 ~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
+.|....++.++.....+.+.+++.+.
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~ 172 (257)
T PRK07067 146 GEALVSHYCATKAAVISYTQSAALALI 172 (257)
T ss_pred CCCCCchhhhhHHHHHHHHHHHHHHhc
Confidence 223333466666666666777777654
No 127
>PLN02253 xanthoxin dehydrogenase
Probab=98.13 E-value=3.8e-05 Score=69.20 Aligned_cols=154 Identities=15% Similarity=0.087 Sum_probs=84.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-c-CCcccEEEeCChhhhc--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEAC-- 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~-~~~~~v~~~~~~~~a~-- 79 (300)
+.+++.||||+|.+|.+++..|+..|. +++++|.++ +.++....++.... . ....++.-..+..+++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 87 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-------KVCIVDLQD--DLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDF 87 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHH
Confidence 346899999999999999999998875 788998753 22222222221100 0 0001111111122222
Q ss_pred -----CCCcEEEEeCCCCCCC-----CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHHHHH
Q 022227 80 -----TGVNIAVMVGGFPRKE-----GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 80 -----~~aDvVi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
...|++|+.||..... ..+. ...+..|+.....+.+.+.+.- .+...++++++....
T Consensus 88 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~-------- 159 (280)
T PLN02253 88 TVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA-------- 159 (280)
T ss_pred HHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc--------
Confidence 3689999999875321 1121 3456677666555554443221 012356776654321
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcCCC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQ 175 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~ 175 (300)
.+.|....|+.++.-...+.+.++++++-.
T Consensus 160 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~ 189 (280)
T PLN02253 160 -IGGLGPHAYTGSKHAVLGLTRSVAAELGKH 189 (280)
T ss_pred -ccCCCCcccHHHHHHHHHHHHHHHHHhhhc
Confidence 122222356777777778888888887643
No 128
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.12 E-value=8.5e-06 Score=71.95 Aligned_cols=169 Identities=17% Similarity=0.147 Sum_probs=88.4
Q ss_pred CC-CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh
Q 022227 1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV 76 (300)
Q Consensus 1 m~-~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~ 76 (300)
|+ ++.+++.|+||+|++|.+++..|+..|. ++++++++.. +.++....++...... ...++.-..+..
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~-------~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 72 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILAGAGA-------HVVVNYRQKA-PRANKVVAEIEAAGGRASAVGADLTDEESVA 72 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCch-HhHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 54 3557899999999999999999998774 6777776431 2222222222211000 001111111111
Q ss_pred h-------hcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCC
Q 022227 77 E-------ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP 149 (300)
Q Consensus 77 ~-------a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p 149 (300)
. .+.+.|+||+.||.......+..+.+..|......+++.+.++..+..++|++|..... ..... ...|
T Consensus 73 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~---~~~~~-~~~~ 148 (248)
T PRK07806 73 ALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH---FIPTV-KTMP 148 (248)
T ss_pred HHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh---cCccc-cCCc
Confidence 1 12468999999876432222223445677777777877777653323467777653211 00000 1122
Q ss_pred CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEE
Q 022227 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~ 183 (300)
....++.++.-...+.+.++.++. +..|+...
T Consensus 149 ~~~~Y~~sK~a~e~~~~~l~~~~~--~~~i~v~~ 180 (248)
T PRK07806 149 EYEPVARSKRAGEDALRALRPELA--EKGIGFVV 180 (248)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhh--ccCeEEEE
Confidence 111244566666666666666553 34566444
No 129
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.11 E-value=1.1e-05 Score=73.90 Aligned_cols=169 Identities=15% Similarity=0.085 Sum_probs=93.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-cc-CCcccEEEeCChhhhcC--CC
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-PLLKGVVATTDAVEACT--GV 82 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-~~-~~~~~v~~~~~~~~a~~--~a 82 (300)
||.|+||+|++|+.++..|++.+. +++++|.... .... ....+... .. ....++.-..+..++++ +.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~-------~V~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH-------EVVVLDNLSN-GSPE-ALKRGERITRVTFVEGDLRDRELLDRLFEEHKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC-------eEEEEeCCCc-cchh-hhhhhccccceEEEECCCCCHHHHHHHHHhCCC
Confidence 689999999999999999998764 6777775321 1111 00011100 00 00001111112334443 68
Q ss_pred cEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----HHHHHCCCCCCCcEEee
Q 022227 83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL 156 (300)
Q Consensus 83 DvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----~~~~~~~~~p~~~i~~~ 156 (300)
|+||++||..... ..+..+.+..|+.....+++.+.+.+. . .++++|. ...... ...+. ....+...++.
T Consensus 72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~v~~ss-~~~~g~~~~~~~~e~-~~~~~~~~y~~ 147 (328)
T TIGR01179 72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGV-K-KFIFSSS-AAVYGEPSSIPISED-SPLGPINPYGR 147 (328)
T ss_pred cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCC-C-EEEEecc-hhhcCCCCCCCcccc-CCCCCCCchHH
Confidence 9999999865322 123345677899999999999887753 2 4555543 211000 00000 00111234566
Q ss_pred ehhhHHHHHHHHHHH-cCCCCCCeEEEEEecCC
Q 022227 157 TRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 157 t~ld~~R~~~~la~~-l~v~~~~V~~~~V~G~h 188 (300)
++...+++...+++. .+++..-++...|+|.+
T Consensus 148 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~ 180 (328)
T TIGR01179 148 SKLMSERILRDLSKADPGLSYVILRYFNVAGAD 180 (328)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEecCcccCCC
Confidence 666666666666666 67787778766677864
No 130
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.11 E-value=0.0001 Score=65.20 Aligned_cols=155 Identities=14% Similarity=0.112 Sum_probs=82.1
Q ss_pred CCC-CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEE-ecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh
Q 022227 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA 75 (300)
Q Consensus 1 m~~-~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~-D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~ 75 (300)
|++ +.++|.|+||+|++|++++..|++.|. ++.+. +.+ .++++....++...... ...++.-..+.
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~-------~v~i~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i 71 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLANDGA-------LVAIHYGRN--KQAADETIREIESNGGKAFLIEADLNSIDGV 71 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC--HHHHHHHHHHHHhcCCcEEEEEcCcCCHHHH
Confidence 543 457999999999999999999998764 56554 333 23332222222110000 00111111111
Q ss_pred hhhc-------------CCCcEEEEeCCCCCCCC---CcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh
Q 022227 76 VEAC-------------TGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (300)
Q Consensus 76 ~~a~-------------~~aDvVi~~ag~~~~~g---~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~ 136 (300)
.+++ .+.|+||++||...... .+. ...+..|+.....+.+.+.++..+...++++|.....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~ 151 (254)
T PRK12746 72 KKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR 151 (254)
T ss_pred HHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc
Confidence 1112 25899999998753211 121 2345678887777777776643222356666654321
Q ss_pred HHHHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 137 ~~~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|....++.++.-...+.+.++++++
T Consensus 152 ---------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~ 179 (254)
T PRK12746 152 ---------LGFTGSIAYGLSKGALNTMTLPLAKHLG 179 (254)
T ss_pred ---------CCCCCCcchHhhHHHHHHHHHHHHHHHh
Confidence 1222222355566555566666676654
No 131
>PRK05717 oxidoreductase; Validated
Probab=98.10 E-value=3.3e-05 Score=68.62 Aligned_cols=152 Identities=16% Similarity=0.108 Sum_probs=85.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCCh-------hh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VE 77 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~-------~~ 77 (300)
.++|.||||+|++|++++..|++.|. +++++|.++ +++.....++.........++.-..+. .+
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGW-------QVVLADLDR--ERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 36799999999999999999998764 788888753 222211111110000000011100011 11
Q ss_pred hcCCCcEEEEeCCCCCCC-----CCcH---HHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEecCchhhHHHHHHHHCCCC
Q 022227 78 ACTGVNIAVMVGGFPRKE-----GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSI 148 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~-~~~~~viv~sNP~~~~~~~~~~~~~~~ 148 (300)
.+...|++|++||..... ..+. .+.+..|+.....+.+.+.++- .+...+|++|+.... .+.
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~---------~~~ 151 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR---------QSE 151 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc---------CCC
Confidence 123579999999875321 1122 3456788887778877776431 112356777654321 122
Q ss_pred CCCcEEeeehhhHHHHHHHHHHHcCC
Q 022227 149 PAKNITCLTRLDHNRALGQISEKLNV 174 (300)
Q Consensus 149 p~~~i~~~t~ld~~R~~~~la~~l~v 174 (300)
|....++.++.-...+.+.++++++-
T Consensus 152 ~~~~~Y~~sKaa~~~~~~~la~~~~~ 177 (255)
T PRK05717 152 PDTEAYAASKGGLLALTHALAISLGP 177 (255)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhcC
Confidence 32234667776666778888888763
No 132
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.10 E-value=6.6e-05 Score=67.70 Aligned_cols=151 Identities=13% Similarity=0.083 Sum_probs=79.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhh-----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA----- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a----- 78 (300)
+.++|.||||+|++|++++..|+..|. +|++++.++ ++++...............++.-..+..++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-------RVVGTVRSE--AARADFEALHPDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-------EEEEEeCCH--HHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHH
Confidence 346899999999999999999998774 788888853 333211110000000000011000111122
Q ss_pred --cCCCcEEEEeCCCCCC---CCCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHHHHHCCCC
Q 022227 79 --CTGVNIAVMVGGFPRK---EGMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (300)
Q Consensus 79 --~~~aDvVi~~ag~~~~---~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~~~~~~~~ 148 (300)
+...|+||++||.... ...+. .+.+..|+.....+.+.+.++. .+..++|++|+-... .+.
T Consensus 74 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~---------~~~ 144 (277)
T PRK06180 74 ATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL---------ITM 144 (277)
T ss_pred HHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc---------CCC
Confidence 2358999999987431 11222 2346778877777776644321 112357777653321 122
Q ss_pred CCCcEEeeehhhHHHHHHHHHHHc
Q 022227 149 PAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 149 p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
|....++.++.-...+...++.++
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~ 168 (277)
T PRK06180 145 PGIGYYCGSKFALEGISESLAKEV 168 (277)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHh
Confidence 333345555554445555566554
No 133
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.10 E-value=7.9e-06 Score=74.40 Aligned_cols=169 Identities=17% Similarity=0.160 Sum_probs=100.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhh--hhhhhhhccCCcccEEE-eC------Ch
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV--KMELVDAAFPLLKGVVA-TT------DA 75 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~--~~dl~~~~~~~~~~v~~-~~------~~ 75 (300)
+.+|.||||+|+||+|.+..|+.+|+ +++.+|...+ ..+... ...+.+. ...+.. .. .+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy-------~v~~vDNl~n-~~~~sl~r~~~l~~~----~~~v~f~~~Dl~D~~~L 69 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY-------GVVIVDNLNN-SYLESLKRVRQLLGE----GKSVFFVEGDLNDAEAL 69 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC-------cEEEEecccc-cchhHHHHHHHhcCC----CCceEEEEeccCCHHHH
Confidence 46899999999999999999999987 7889997432 112111 1111111 011111 01 12
Q ss_pred hhhcC--CCcEEEEeCCCCC-CCC-CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH---H-HHHHHCCC
Q 022227 76 VEACT--GVNIAVMVGGFPR-KEG-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA---L-ILKEFAPS 147 (300)
Q Consensus 76 ~~a~~--~aDvVi~~ag~~~-~~g-~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~---~-~~~~~~~~ 147 (300)
++-|+ .-|-|+|.|+..+ .+. +.+......|+-.+.++.+.++++.- +-+|.+.++.+-- . -+.+..+-
T Consensus 70 ~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~---~~~V~sssatvYG~p~~ip~te~~~t 146 (343)
T KOG1371|consen 70 EKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNV---KALVFSSSATVYGLPTKVPITEEDPT 146 (343)
T ss_pred HHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCC---ceEEEecceeeecCcceeeccCcCCC
Confidence 22222 3589999887643 122 34566778899999999999999853 3455554443110 0 01111111
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
--+.+.++-|....+.+...+-+.++.....+|.+.+.|.|
T Consensus 147 ~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~ 187 (343)
T KOG1371|consen 147 DQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAH 187 (343)
T ss_pred CCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCcc
Confidence 11234567777777777777777777778888888777744
No 134
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.10 E-value=2.4e-05 Score=68.53 Aligned_cols=152 Identities=19% Similarity=0.163 Sum_probs=80.5
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE 77 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~ 77 (300)
|+++.++|+|+||+|++|..++..|+++|. ++.+++.++ ++++....++...... ...++.-..+..+
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGA-------KVVIYDSNE--EAAEALAAELRAAGGEARVLVFDVSDEAAVRA 71 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 667778999999999999999999998875 688888764 3332222222211000 0001000001111
Q ss_pred -------hcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEecCchhhHHHH
Q 022227 78 -------ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALI 140 (300)
Q Consensus 78 -------a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~----~~~~~~~~viv~sNP~~~~~~~ 140 (300)
.+...|.||+++|..... ..+. .+.+..|+.....+.+.+. +... .++|++|.-...
T Consensus 72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~ii~~ss~~~~---- 145 (246)
T PRK05653 72 LIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARY--GRIVNISSVSGV---- 145 (246)
T ss_pred HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEECcHHhc----
Confidence 234569999998763221 1122 2346677777776666664 3322 256666542210
Q ss_pred HHHHCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 141 ~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.+...-++.++.....+...+++.+
T Consensus 146 -----~~~~~~~~y~~sk~~~~~~~~~l~~~~ 172 (246)
T PRK05653 146 -----TGNPGQTNYSAAKAGVIGFTKALALEL 172 (246)
T ss_pred -----cCCCCCcHhHhHHHHHHHHHHHHHHHH
Confidence 112212223444544455566666654
No 135
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.09 E-value=5.4e-05 Score=66.83 Aligned_cols=157 Identities=14% Similarity=0.055 Sum_probs=82.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc-
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC- 79 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~- 79 (300)
|..+.++|.||||+|++|++++..|+..|. ++++.+.+. .++++....++.........++.-..+..+++
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGA-------RVVVNYHQS-EDAAEALADELGDRAIALQADVTDREQVQAMFA 72 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCC-------eEEEEcCCC-HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 555667899999999999999999998775 566654432 22222111111100000000110011112222
Q ss_pred ------CC-CcEEEEeCCCCC-------CC--CCcH---HHHHHhhHHHHHHHHHHHhhh--cCCCeEEEEecCchhhHH
Q 022227 80 ------TG-VNIAVMVGGFPR-------KE--GMER---KDVMSKNVSIYKAQASALEQH--AAPNCKVLVVANPANTNA 138 (300)
Q Consensus 80 ------~~-aDvVi~~ag~~~-------~~--g~~r---~dl~~~N~~i~~~i~~~i~~~--~~~~~~viv~sNP~~~~~ 138 (300)
.. .|++|+.||... .+ ..+. .+.+..|+.....+.+.+.++ ..+...++++++....
T Consensus 73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-- 150 (253)
T PRK08642 73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-- 150 (253)
T ss_pred HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc--
Confidence 23 899999997521 11 1122 234666766555555554321 0112467777654320
Q ss_pred HHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCC
Q 022227 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (300)
Q Consensus 139 ~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v 174 (300)
...++...|+.++.-...+.+.+|+.++-
T Consensus 151 -------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~ 179 (253)
T PRK08642 151 -------NPVVPYHDYTTAKAALLGLTRNLAAELGP 179 (253)
T ss_pred -------CCCCCccchHHHHHHHHHHHHHHHHHhCc
Confidence 11222235677777777888888887753
No 136
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.08 E-value=3.1e-05 Score=68.17 Aligned_cols=152 Identities=14% Similarity=0.138 Sum_probs=83.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeC-------Ch
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-------DA 75 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~-------~~ 75 (300)
++.++|.|+||+|++|++++..|+..|. ++++++.++ +.++....++.........++.-.. ..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGA-------RVAITGRDP--ASLEAARAELGESALVIRADAGDVAAQKALAQAL 74 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence 3457999999999999999999998875 688888753 3332211111100000000000000 01
Q ss_pred hhhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCC
Q 022227 76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP 149 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p 149 (300)
.+.+...|++|+.||..... ..+. ...+..|+.....+.+.+.++-.....+++++..... .+.|
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~---------~~~~ 145 (249)
T PRK06500 75 AEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH---------IGMP 145 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc---------cCCC
Confidence 22235689999999874321 1122 3456788888888888776531112345665543321 1223
Q ss_pred CCcEEeeehhhHHHHHHHHHHHc
Q 022227 150 AKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l 172 (300)
....++.++.-...+.+.+++++
T Consensus 146 ~~~~Y~~sK~a~~~~~~~la~e~ 168 (249)
T PRK06500 146 NSSVYAASKAALLSLAKTLSGEL 168 (249)
T ss_pred CccHHHHHHHHHHHHHHHHHHHh
Confidence 23345556655556666666665
No 137
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.07 E-value=7.2e-05 Score=66.38 Aligned_cols=157 Identities=17% Similarity=0.149 Sum_probs=82.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeCChhh---
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVE--- 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~~~~~--- 77 (300)
+.+++.|+||+|++|++++..|++.|. ++++++.++ +.++....++.+..... ..++.-.....+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-------AVAIADLNQ--DGANAVADEINKAGGKAIGVAMDVTNEDAVNAGID 76 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHH
Confidence 457899999999999999999998875 688888864 33332222232211000 001000001111
Q ss_pred ----hcCCCcEEEEeCCCCCCC---C---CcHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHH
Q 022227 78 ----ACTGVNIAVMVGGFPRKE---G---MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 78 ----a~~~aDvVi~~ag~~~~~---g---~~r~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
.+...|+||+++|..... . +.-.+.+..|+.. ++.+.+.+.+... ..+++++|.-.. .
T Consensus 77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~-------~ 148 (262)
T PRK13394 77 KVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHS-------H 148 (262)
T ss_pred HHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhh-------c
Confidence 223589999999874211 1 1123445567766 6666666622222 235666654211 0
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
.+.|....++.++.....+.+.+++++ .+..++.
T Consensus 149 --~~~~~~~~y~~sk~a~~~~~~~la~~~--~~~~i~v 182 (262)
T PRK13394 149 --EASPLKSAYVTAKHGLLGLARVLAKEG--AKHNVRS 182 (262)
T ss_pred --CCCCCCcccHHHHHHHHHHHHHHHHHh--hhcCeEE
Confidence 122333345655555555556666664 2334553
No 138
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.07 E-value=5.7e-05 Score=66.91 Aligned_cols=148 Identities=14% Similarity=0.110 Sum_probs=78.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCCh-------hhh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VEA 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~-------~~a 78 (300)
|+|.|+||+|.+|..++..|+..|. +++++++++ ++++....++.........++.-..+. .+.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 71 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRRQ--ERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE 71 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4899999999999999999998774 788998863 333322111110000000011000011 122
Q ss_pred cCCCcEEEEeCCCCC--CC--CCcH---HHHHHhhHHHHHHHHH----HHhhhcCCCeEEEEecCchhhHHHHHHHHCCC
Q 022227 79 CTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (300)
Q Consensus 79 ~~~aDvVi~~ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~----~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~ 147 (300)
+.+.|+||+.||... .+ ..+. .+.+..|......+.+ .+.+.. ...++++|..... .+
T Consensus 72 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~---------~~ 140 (248)
T PRK10538 72 WRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN--HGHIINIGSTAGS---------WP 140 (248)
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEECCcccC---------CC
Confidence 347999999998642 11 1122 3346667666444444 444332 2356777653321 12
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
++....++.++.-...+...+++.++
T Consensus 141 ~~~~~~Y~~sK~~~~~~~~~l~~~~~ 166 (248)
T PRK10538 141 YAGGNVYGATKAFVRQFSLNLRTDLH 166 (248)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhc
Confidence 23223455555555556666776654
No 139
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.06 E-value=2.8e-05 Score=69.40 Aligned_cols=156 Identities=19% Similarity=0.156 Sum_probs=82.6
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhh---
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE--- 77 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~--- 77 (300)
|+++.+++.|+||+|.+|++++..|++.|. +|+++|.++ ++++...............++.-..+..+
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGA-------RVAVLDKSA--AGLQELEAAHGDAVVGVEGDVRSLDDHKEAVA 71 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHhhcCCceEEEEeccCCHHHHHHHHH
Confidence 766778999999999999999999998875 788888753 33322111110000000011110111112
Q ss_pred ----hcCCCcEEEEeCCCCCC--C--CCc-------HHHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEecCchhhHHHHH
Q 022227 78 ----ACTGVNIAVMVGGFPRK--E--GME-------RKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALIL 141 (300)
Q Consensus 78 ----a~~~aDvVi~~ag~~~~--~--g~~-------r~dl~~~N~~i~~~i~~~i~~~~-~~~~~viv~sNP~~~~~~~~ 141 (300)
.+...|++|++||.... + ..+ -...+..|+.....+.+.+.+.- .++..+|+++.....
T Consensus 72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~----- 146 (262)
T TIGR03325 72 RCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF----- 146 (262)
T ss_pred HHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee-----
Confidence 23467999999986421 1 111 12345566655555555444321 111235555432211
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCC
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v 174 (300)
. + .+....++.++.-...+.+.+|++++-
T Consensus 147 --~-~-~~~~~~Y~~sKaa~~~l~~~la~e~~~ 175 (262)
T TIGR03325 147 --Y-P-NGGGPLYTAAKHAVVGLVKELAFELAP 175 (262)
T ss_pred --c-C-CCCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 1 1 121224566666667778888888763
No 140
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.06 E-value=0.00019 Score=63.22 Aligned_cols=160 Identities=16% Similarity=0.172 Sum_probs=102.2
Q ss_pred CCC-CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhh-hccCCcccEEEeC-----
Q 022227 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD-AAFPLLKGVVATT----- 73 (300)
Q Consensus 1 m~~-~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~-~~~~~~~~v~~~~----- 73 (300)
|+. +.+-+.||||++-+|..++..|.+.|. .++|..+. .++|+..+.++.+ ...+..-+++-..
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~-------~vvl~aRR--~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~ 71 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALAEAGA-------KVVLAARR--EERLEALADEIGAGAALALALDVTDRAAVEAA 71 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecc--HHHHHHHHHhhccCceEEEeeccCCHHHHHHH
Confidence 444 345678999999999999999999886 79999986 4788877777764 1111111221111
Q ss_pred --ChhhhcCCCcEEEEeCCCCCCCCC---c---HHHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 74 --DAVEACTGVNIAVMVGGFPRKEGM---E---RKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 74 --~~~~a~~~aDvVi~~ag~~~~~g~---~---r~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
...+.+...|++|.-||..+.... + -..+++.|++.+.... +.+.+.. ..-+|+.++=..
T Consensus 72 i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~--~G~IiN~~SiAG------ 143 (246)
T COG4221 72 IEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK--SGHIINLGSIAG------ 143 (246)
T ss_pred HHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC--CceEEEeccccc------
Confidence 234556789999999998654211 1 2356788887665554 4455543 336788775332
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEE
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~ 182 (300)
+ ..+|...+|+.|+--...|...|.+.+. ...|+-.
T Consensus 144 -~--~~y~~~~vY~ATK~aV~~fs~~LR~e~~--g~~IRVt 179 (246)
T COG4221 144 -R--YPYPGGAVYGATKAAVRAFSLGLRQELA--GTGIRVT 179 (246)
T ss_pred -c--ccCCCCccchhhHHHHHHHHHHHHHHhc--CCCeeEE
Confidence 2 2367677999988776666555555443 4555533
No 141
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.05 E-value=8.4e-05 Score=65.28 Aligned_cols=156 Identities=13% Similarity=0.123 Sum_probs=83.2
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE 77 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~ 77 (300)
|..+.++|.||||+|.+|++++..|++.|. +++++..+. .+.++....++...... ...++.-..+..+
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGF-------AVAVNYAGS-AAAADELVAEIEAAGGRAIAVQADVADAAAVTR 72 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCC-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 555667999999999999999999998875 566665532 22222222222211100 0001110111222
Q ss_pred h-------cCCCcEEEEeCCCCCCC---CC---cHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 78 A-------CTGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 78 a-------~~~aDvVi~~ag~~~~~---g~---~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
+ +...|+||+.||..... .. +-...+..|+.....+.+.+.+.-.+..+++++|.....
T Consensus 73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-------- 144 (245)
T PRK12937 73 LFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA-------- 144 (245)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc--------
Confidence 2 23689999999864311 11 122346677776666666555442223456766643210
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|....++.++.-...+...+++++.
T Consensus 145 -~~~~~~~~Y~~sK~a~~~~~~~~a~~~~ 172 (245)
T PRK12937 145 -LPLPGYGPYAASKAAVEGLVHVLANELR 172 (245)
T ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHhh
Confidence 1233333456665555556666676654
No 142
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.05 E-value=7.1e-05 Score=67.48 Aligned_cols=164 Identities=16% Similarity=0.144 Sum_probs=89.9
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchh-----hhhhhhhhhhhhccC---CcccEEEe
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-----ALNGVKMELVDAAFP---LLKGVVAT 72 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~-----~l~g~~~dl~~~~~~---~~~~v~~~ 72 (300)
|.++.+++.|+||+|++|++++..|++.|. ++++++.+.... .++..+.++...... ...++.-.
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~ 74 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGA-------NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDE 74 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCH
Confidence 345567899999999999999999998875 788888753210 122122222211000 00111111
Q ss_pred CChhhh-------cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhH
Q 022227 73 TDAVEA-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTN 137 (300)
Q Consensus 73 ~~~~~a-------~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~ 137 (300)
.+..+. +...|++|++||..... ..+. ...++.|+.....+.+.+..+- .....++++|.+...
T Consensus 75 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~- 153 (273)
T PRK08278 75 DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL- 153 (273)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc-
Confidence 111222 23689999999874321 1222 2345567665555555554321 013456776654321
Q ss_pred HHHHHHHCCC-CCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 138 ALILKEFAPS-IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 138 ~~~~~~~~~~-~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
. +. +|....++.++.-..++...++++++ +..|+.
T Consensus 154 ------~-~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v 189 (273)
T PRK08278 154 ------D-PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAV 189 (273)
T ss_pred ------c-ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 1 11 13334577788777888888888876 344553
No 143
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.05 E-value=7.4e-05 Score=65.92 Aligned_cols=150 Identities=22% Similarity=0.182 Sum_probs=82.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh---
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV--- 76 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~--- 76 (300)
.+.++++|+||+|++|.+++..|++.|. +++++|.++ +.++....++.+.... ...++.-..+..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 74 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA-------SVVVADINA--EGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMA 74 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 3567899999999999999999998774 788998863 2332222222221100 001111000111
Q ss_pred ----hhcCCCcEEEEeCCCCCC----C--CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHH
Q 022227 77 ----EACTGVNIAVMVGGFPRK----E--GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL 141 (300)
Q Consensus 77 ----~a~~~aDvVi~~ag~~~~----~--g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~ 141 (300)
+.+...|+||++||.... + ..+. .+.+..|+.....+.+.+.++- .+..+++++|+-..
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------ 148 (250)
T PRK07774 75 DATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA------ 148 (250)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc------
Confidence 122468999999987421 1 1122 2345677776666666655442 11235677664221
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
+++...++.++.....+.+.+++++.
T Consensus 149 ------~~~~~~Y~~sK~a~~~~~~~l~~~~~ 174 (250)
T PRK07774 149 ------WLYSNFYGLAKVGLNGLTQQLARELG 174 (250)
T ss_pred ------cCCccccHHHHHHHHHHHHHHHHHhC
Confidence 11123455566555566667777664
No 144
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.04 E-value=7.1e-05 Score=66.43 Aligned_cols=151 Identities=18% Similarity=0.173 Sum_probs=81.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh-----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV----- 76 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~----- 76 (300)
.++|.|+||+|++|..++..|+..|. +|++.|.++ ++++....++.+.... ...++.-..+..
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA-------EVILNGRDP--AKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA 80 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence 46899999999999999999998875 788888863 3333322223221000 000110000111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHHHHHHHCC
Q 022227 77 --EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAP 146 (300)
Q Consensus 77 --~a~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~~~~~~~~ 146 (300)
+.+...|++|+.+|..... ..+ -.+.+..|+.....+.+.+.++.. +..++|++|+.... .
T Consensus 81 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------~ 151 (255)
T PRK07523 81 FEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA---------L 151 (255)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc---------c
Confidence 2234579999999875311 111 133466787766666666554421 12367777764321 1
Q ss_pred CCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 147 SIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 147 ~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
..|....++.++.....+.+.++.++.
T Consensus 152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~ 178 (255)
T PRK07523 152 ARPGIAPYTATKGAVGNLTKGMATDWA 178 (255)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 122222345555555555666666553
No 145
>PRK08264 short chain dehydrogenase; Validated
Probab=98.04 E-value=3.6e-05 Score=67.47 Aligned_cols=147 Identities=22% Similarity=0.185 Sum_probs=80.9
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhh-------hhhhhhhhccCCcccEEEeC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-------VKMELVDAAFPLLKGVVATT 73 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g-------~~~dl~~~~~~~~~~v~~~~ 73 (300)
|++..++|.|+||+|.+|++++..|++.|.- ++++++.+. ++++. ...|+.+.. .+ .
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~------~V~~~~r~~--~~~~~~~~~~~~~~~D~~~~~-----~~---~ 65 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAA------KVYAAARDP--ESVTDLGPRVVPLQLDVTDPA-----SV---A 65 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcc------cEEEEecCh--hhhhhcCCceEEEEecCCCHH-----HH---H
Confidence 4556679999999999999999999987641 578888753 22221 111222111 00 0
Q ss_pred ChhhhcCCCcEEEEeCCCCCCC----CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHHHHH
Q 022227 74 DAVEACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 74 ~~~~a~~~aDvVi~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
...+.+...|+||+++|..... ..+. .+.+..|......+.+.+.+.. .+..+++++|+....
T Consensus 66 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-------- 137 (238)
T PRK08264 66 AAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW-------- 137 (238)
T ss_pred HHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc--------
Confidence 1122234589999999873211 1122 2345667766666666654321 012356777654321
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.+....++.++.-...+...+++++
T Consensus 138 -~~~~~~~~y~~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 138 -VNFPNLGTYSASKAAAWSLTQALRAEL 164 (238)
T ss_pred -cCCCCchHhHHHHHHHHHHHHHHHHHh
Confidence 122322234555555556666666665
No 146
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.04 E-value=0.00025 Score=61.21 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=59.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
+|+++|+| +|++|+.++..+...|. |+..-..+. +++++..+..+.- .++. ....+|.+.||+
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~-------eV~igs~r~-~~~~~a~a~~l~~-------~i~~-~~~~dA~~~aDV 63 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGH-------EVIIGSSRG-PKALAAAAAALGP-------LITG-GSNEDAAALADV 63 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCC-------eEEEecCCC-hhHHHHHHHhhcc-------cccc-CChHHHHhcCCE
Confidence 37899999 89999999999998764 666664442 3444433332321 1222 356789999999
Q ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCch
Q 022227 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (300)
Q Consensus 85 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~ 134 (300)
||++- | +... .++.+.+...-. +-++|=.|||.
T Consensus 64 VvLAV--P----------~~a~----~~v~~~l~~~~~-~KIvID~tnp~ 96 (211)
T COG2085 64 VVLAV--P----------FEAI----PDVLAELRDALG-GKIVIDATNPI 96 (211)
T ss_pred EEEec--c----------HHHH----HhHHHHHHHHhC-CeEEEecCCCc
Confidence 99983 2 1222 334444443221 34678889994
No 147
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.03 E-value=7.4e-05 Score=67.10 Aligned_cols=161 Identities=12% Similarity=0.053 Sum_probs=87.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-C----CcccEEEeCChh
Q 022227 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P----LLKGVVATTDAV 76 (300)
Q Consensus 2 ~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~----~~~~v~~~~~~~ 76 (300)
+++.+++.|+||+|++|++++..|++.|. +|++++.++ ++++....++..... . ...++.-..+..
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~ 74 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-------AVMIVGRNP--DKLAAAAEEIEALKGAGAVRYEPADVTDEDQVA 74 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhccCCCceEEEEcCCCCHHHHH
Confidence 34557999999999999999999998875 788888753 333322223321100 0 000111011111
Q ss_pred hhc-------CCCcEEEEeCCCCCC--C--CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHH
Q 022227 77 EAC-------TGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALI 140 (300)
Q Consensus 77 ~a~-------~~aDvVi~~ag~~~~--~--g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~ 140 (300)
..+ ...|++|+.||.... + ..+. .+.+..|......+.+.+.+.- .+...++++|+...
T Consensus 75 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~----- 149 (276)
T PRK05875 75 RAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA----- 149 (276)
T ss_pred HHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh-----
Confidence 222 368999999985421 1 1222 2345567666666665444321 11235676665332
Q ss_pred HHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEE
Q 022227 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (300)
Q Consensus 141 ~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~ 182 (300)
. ...|....++.++.-...+.+.+++.++ +..++..
T Consensus 150 ---~-~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~ 185 (276)
T PRK05875 150 ---S-NTHRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVN 185 (276)
T ss_pred ---c-CCCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEE
Confidence 1 1123223466677666677777777765 3456533
No 148
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.02 E-value=0.0001 Score=65.92 Aligned_cols=162 Identities=14% Similarity=0.087 Sum_probs=85.8
Q ss_pred CC-CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChh---
Q 022227 1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV--- 76 (300)
Q Consensus 1 m~-~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~--- 76 (300)
|. ++.+++.|+||+|.+|..++..|++.|. +|++.|++. ++++....++.........++.-..+..
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 71 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALVAAGA-------RVAIVDIDA--DNGAAVAASLGERARFIATDITDDAAIERAV 71 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCeeEEEEecCCCHHHHHHHH
Confidence 54 3557899999999999999999998875 788998863 3332222111100000000111011111
Q ss_pred ----hhcCCCcEEEEeCCCCCCC--CCcH---HHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEecCchhhHHHHHHHHCC
Q 022227 77 ----EACTGVNIAVMVGGFPRKE--GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAP 146 (300)
Q Consensus 77 ----~a~~~aDvVi~~ag~~~~~--g~~r---~dl~~~N~~i~~~i~~~i~~~~-~~~~~viv~sNP~~~~~~~~~~~~~ 146 (300)
+.+...|++|+.||..... ..+. .+.+..|+.....+.+.+...- .+...+|+++.-... .
T Consensus 72 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~---------~ 142 (261)
T PRK08265 72 ATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK---------F 142 (261)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc---------c
Confidence 2234679999999864322 1222 2345567665555554443321 123456776653321 1
Q ss_pred CCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEE
Q 022227 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (300)
Q Consensus 147 ~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~ 182 (300)
+.|..-.++.++.-...+.+.++.++. +..|+..
T Consensus 143 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn 176 (261)
T PRK08265 143 AQTGRWLYPASKAAIRQLTRSMAMDLA--PDGIRVN 176 (261)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCEEEE
Confidence 222222455555555666777777764 3456543
No 149
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.02 E-value=7.3e-05 Score=66.95 Aligned_cols=108 Identities=18% Similarity=0.214 Sum_probs=64.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhh------hhhhhhhhccCCcccEEEeCChhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG------VKMELVDAAFPLLKGVVATTDAVE 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g------~~~dl~~~~~~~~~~v~~~~~~~~ 77 (300)
+.++|.||||+|.+|++++..|+.+|. +|++.+.++ +.++. ...|+.+.. +..+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~D~~d~~-----------~~~~ 62 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-------RVFGTSRNP--ARAAPIPGVELLELDVTDDA-----------SVQA 62 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCh--hhccccCCCeeEEeecCCHH-----------HHHH
Confidence 345899999999999999999998874 688888753 22211 112222211 1222
Q ss_pred h-------cCCCcEEEEeCCCCCCCC---Cc---HHHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEecCc
Q 022227 78 A-------CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANP 133 (300)
Q Consensus 78 a-------~~~aDvVi~~ag~~~~~g---~~---r~dl~~~N~~i~~~i~~~----i~~~~~~~~~viv~sNP 133 (300)
+ +...|++|++||...... .+ -...+..|......+.+. +++.+. .++|++|+.
T Consensus 63 ~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~~iv~isS~ 133 (270)
T PRK06179 63 AVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGS--GRIINISSV 133 (270)
T ss_pred HHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--ceEEEECCc
Confidence 2 345799999999754221 11 234566676555555554 444432 356776653
No 150
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.00 E-value=8e-05 Score=65.13 Aligned_cols=122 Identities=15% Similarity=0.151 Sum_probs=67.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-cC-CcccEEEeCChhh---
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVE--- 77 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~~-~~~~v~~~~~~~~--- 77 (300)
++.++|+|+||+|++|++++..|+..|. +++++++++ +++.....++.... .. ...++.-..+..+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~ 74 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY-------KVAITARDQ--KELEEAAAELNNKGNVLGLAADVRDEADVQRAVD 74 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEeeCCH--HHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHH
Confidence 4457899999999999999999998764 788888763 33332222332110 00 0001000011112
Q ss_pred ----hcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEecCc
Q 022227 78 ----ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANP 133 (300)
Q Consensus 78 ----a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~-~~~~viv~sNP 133 (300)
.+..+|+||+++|..... ..+. .+.+..|+.....+.+.+.+... ....+|++|+.
T Consensus 75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 75 AIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 234789999999865321 1222 23466677666666555543321 12356666654
No 151
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.00 E-value=4.7e-05 Score=67.18 Aligned_cols=152 Identities=16% Similarity=0.083 Sum_probs=80.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhh-hhccC-CcccEEEeCChhhh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV-DAAFP-LLKGVVATTDAVEA 78 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~-~~~~~-~~~~v~~~~~~~~a 78 (300)
|..+.++++|+||+|.+|++++..|++.|. ++++++.+. +.+.....++. ..... ...++.-..+..++
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGA-------RVVVADRDA--EAAERVAAAIAAGGRAFARQGDVGSAEAVEAL 71 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCC-------eEEEecCCH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 666677999999999999999999998774 688888753 33322222221 00000 00011000011122
Q ss_pred -------cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 79 -------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 79 -------~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
+.+.|+||+++|..... ..+. ...+..|+.....+. +.+++.. ..+++++|.-...
T Consensus 72 ~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~sS~~~~----- 144 (252)
T PRK06138 72 VDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG--GGSIVNTASQLAL----- 144 (252)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC--CeEEEEECChhhc-----
Confidence 24789999999864321 1122 223566766554444 4444443 2356666643221
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.+....++.++.-...+.+.+++++
T Consensus 145 ----~~~~~~~~Y~~sK~a~~~~~~~l~~~~ 171 (252)
T PRK06138 145 ----AGGRGRAAYVASKGAIASLTRAMALDH 171 (252)
T ss_pred ----cCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 122222334555555556666677665
No 152
>PRK06182 short chain dehydrogenase; Validated
Probab=98.00 E-value=7.9e-05 Score=66.93 Aligned_cols=114 Identities=15% Similarity=0.150 Sum_probs=64.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc-----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC----- 79 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~----- 79 (300)
.++|+||||+|.+|.+++..|++.|. +|++.+.++ ++++.... ........++.-..+..+.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~ 70 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY-------TVYGAARRV--DKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIA 70 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHH
Confidence 45899999999999999999998774 688888753 33321110 00000001111111122222
Q ss_pred --CCCcEEEEeCCCCCCC---CC---cHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecC
Q 022227 80 --TGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 80 --~~aDvVi~~ag~~~~~---g~---~r~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sN 132 (300)
.+.|++|+.||..... .. +....+..|... ++.+.+.+++... .++|++|+
T Consensus 71 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--g~iv~isS 133 (273)
T PRK06182 71 EEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS--GRIINISS 133 (273)
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC--CEEEEEcc
Confidence 3789999999875321 11 123445666654 5666666666543 35777765
No 153
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.98 E-value=8e-05 Score=65.22 Aligned_cols=125 Identities=18% Similarity=0.183 Sum_probs=67.8
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh-
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV- 76 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~- 76 (300)
|.++.++|+|+||+|++|++++..|++.|. ++++...+. .+.++....++...... ...++.-..+..
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGA-------NVVINYASS-EAGAEALVAEIGALGGKALAVQGDVSDAESVER 72 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCc-hhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 667778999999999999999999998875 565555432 12222222222111000 000110000111
Q ss_pred ------hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCc
Q 022227 77 ------EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANP 133 (300)
Q Consensus 77 ------~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP 133 (300)
+.+.+.|+||+++|..... ..+. ...+..|+.....+.+.+.++.. +..+++++|+.
T Consensus 73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~ 143 (248)
T PRK05557 73 AVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSV 143 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccc
Confidence 1234689999999864321 1122 23455677777777766665421 12356666653
No 154
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.97 E-value=1.1e-05 Score=73.61 Aligned_cols=156 Identities=15% Similarity=0.183 Sum_probs=84.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||.|+||+|++|+++...|...++ +++.++.. ..|+.+.... ....++. ..|+|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~-------~v~~~~r~---------~~dl~d~~~~--------~~~~~~~-~pd~V 55 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY-------EVIATSRS---------DLDLTDPEAV--------AKLLEAF-KPDVV 55 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE-------EEEEESTT---------CS-TTSHHHH--------HHHHHHH---SEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC-------EEEEeCch---------hcCCCCHHHH--------HHHHHHh-CCCeE
Confidence 6999999999999999999887654 67777543 1234332200 0111222 47999
Q ss_pred EEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH----HHHHCCCCCCCcEEeeehh
Q 022227 86 VMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEFAPSIPAKNITCLTRL 159 (300)
Q Consensus 86 i~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~----~~~~~~~~p~~~i~~~t~l 159 (300)
|++|+..... ..++......|+.....+++.+.+. ++++|.+|.=. +..-- ..+.. ...+.+.+|-+++
T Consensus 56 in~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~---~~~li~~STd~-VFdG~~~~~y~E~d-~~~P~~~YG~~K~ 130 (286)
T PF04321_consen 56 INCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER---GARLIHISTDY-VFDGDKGGPYTEDD-PPNPLNVYGRSKL 130 (286)
T ss_dssp EE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC---T-EEEEEEEGG-GS-SSTSSSB-TTS-----SSHHHHHHH
T ss_pred eccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc---CCcEEEeeccE-EEcCCcccccccCC-CCCCCCHHHHHHH
Confidence 9999875321 2244556778999999999999887 45677776421 10000 00000 0112346777887
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeee
Q 022227 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 195 (300)
Q Consensus 160 d~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~ 195 (300)
..+++.... .. +..-+|.-.++|.++.+.+-.
T Consensus 131 ~~E~~v~~~---~~-~~~IlR~~~~~g~~~~~~~~~ 162 (286)
T PF04321_consen 131 EGEQAVRAA---CP-NALILRTSWVYGPSGRNFLRW 162 (286)
T ss_dssp HHHHHHHHH----S-SEEEEEE-SEESSSSSSHHHH
T ss_pred HHHHHHHHh---cC-CEEEEecceecccCCCchhhh
Confidence 766544331 12 444556656689877655443
No 155
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.96 E-value=8.2e-05 Score=66.88 Aligned_cols=147 Identities=13% Similarity=0.161 Sum_probs=79.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChh-------hh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------EA 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~-------~a 78 (300)
+++.||||+|++|++++..|+..|. .+.+++.++ +.++.....+.........+++-..+.. +.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-------RVAATVRRP--DALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA 73 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999998774 677777653 2222111110000000000000000111 12
Q ss_pred cCCCcEEEEeCCCCCCCC---CcH---HHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecCchhhHHHHHHHHCCCC
Q 022227 79 CTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEFAPSI 148 (300)
Q Consensus 79 ~~~aDvVi~~ag~~~~~g---~~r---~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~ 148 (300)
+...|+||++||...... .+. ...+..|+.....+.+.+ ++.+. .++|++|+-... .+.
T Consensus 74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~---------~~~ 142 (276)
T PRK06482 74 LGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG--GRIVQVSSEGGQ---------IAY 142 (276)
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CEEEEEcCcccc---------cCC
Confidence 346899999998754221 112 345667888888887776 33322 356666652210 123
Q ss_pred CCCcEEeeehhhHHHHHHHHHHHc
Q 022227 149 PAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 149 p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
|....++.++.-...+...+++.+
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~~~ 166 (276)
T PRK06482 143 PGFSLYHATKWGIEGFVEAVAQEV 166 (276)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHh
Confidence 333345666665556666666664
No 156
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.96 E-value=0.0002 Score=65.96 Aligned_cols=110 Identities=24% Similarity=0.315 Sum_probs=74.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhh--hc---cC---CcccEEEeCChh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD--AA---FP---LLKGVVATTDAV 76 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~--~~---~~---~~~~v~~~~~~~ 76 (300)
++||+|+| +|.=|++++..|.+.+. +++|+.+++ + ...++.. .. +| +..++..++|+.
T Consensus 1 ~~kI~ViG-aGswGTALA~~la~ng~-------~V~lw~r~~--~----~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~ 66 (329)
T COG0240 1 MMKIAVIG-AGSWGTALAKVLARNGH-------EVRLWGRDE--E----IVAEINETRENPKYLPGILLPPNLKATTDLA 66 (329)
T ss_pred CceEEEEc-CChHHHHHHHHHHhcCC-------eeEEEecCH--H----HHHHHHhcCcCccccCCccCCcccccccCHH
Confidence 37999999 79999999999998763 788898863 2 2223332 22 12 346788899999
Q ss_pred hhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC-----chhhHHHHHHHH
Q 022227 77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-----PANTNALILKEF 144 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN-----P~~~~~~~~~~~ 144 (300)
+++++||+|++.- | ...++++++.++.+-+++++++.+|- +...++.++.+.
T Consensus 67 ~a~~~ad~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~ 123 (329)
T COG0240 67 EALDGADIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEE 123 (329)
T ss_pred HHHhcCCEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHH
Confidence 9999999999973 2 24455666666544445666776662 234556666555
No 157
>PRK06398 aldose dehydrogenase; Validated
Probab=97.96 E-value=0.0002 Score=63.94 Aligned_cols=149 Identities=12% Similarity=0.086 Sum_probs=83.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchh-hhhhhhhhhhhhccCCcccEEEeCChhhhcCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-ALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~-~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (300)
++.+++.|+||+|.+|.+++..|+..|. ++++++.++... ++.....|+.+.... .. ......+.+..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~~D~~~~~~i--~~--~~~~~~~~~~~ 72 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS-------NVINFDIKEPSYNDVDYFKVDVSNKEQV--IK--GIDYVISKYGR 72 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCccccCceEEEEccCCCHHHH--HH--HHHHHHHHcCC
Confidence 3557899999999999999999998875 688888753211 122223344432200 00 00011223457
Q ss_pred CcEEEEeCCCCCCC---CCcHH---HHHHhhHHHHHHHHHH----HhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCC
Q 022227 82 VNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK 151 (300)
Q Consensus 82 aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~----i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~ 151 (300)
.|++|+.||..... ..+.. ..+..|+.....+.+. +.+.. ...+|++|.-... ...|..
T Consensus 73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~~---------~~~~~~ 141 (258)
T PRK06398 73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD--KGVIINIASVQSF---------AVTRNA 141 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeCcchhc---------cCCCCC
Confidence 89999999875321 11222 3456676655555444 43332 3466776653211 112322
Q ss_pred cEEeeehhhHHHHHHHHHHHcC
Q 022227 152 NITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 152 ~i~~~t~ld~~R~~~~la~~l~ 173 (300)
..|+.++.-...+.+.++.+++
T Consensus 142 ~~Y~~sKaal~~~~~~la~e~~ 163 (258)
T PRK06398 142 AAYVTSKHAVLGLTRSIAVDYA 163 (258)
T ss_pred chhhhhHHHHHHHHHHHHHHhC
Confidence 3466666666677778888776
No 158
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.96 E-value=0.00014 Score=64.40 Aligned_cols=154 Identities=16% Similarity=0.093 Sum_probs=83.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh--
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA-- 75 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~-- 75 (300)
|-++.++|.|+||+|+||++++..|+.+|. +|+++|+++ +.++....++...... ...++.-..+.
T Consensus 1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (258)
T PRK07890 1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGA-------DVVLAARTA--ERLDEVAAEIDDLGRRALAVPTDITDEDQCAN 71 (258)
T ss_pred CccCCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEecCCCCHHHHHH
Confidence 445667999999999999999999998875 788898753 3333333333211100 00111100111
Q ss_pred -----hhhcCCCcEEEEeCCCCCC--C--CCcH---HHHHHhhHHHHHHHHHHHhhhcCC-CeEEEEecCchhhHHHHHH
Q 022227 76 -----VEACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNALILK 142 (300)
Q Consensus 76 -----~~a~~~aDvVi~~ag~~~~--~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~-~~~viv~sNP~~~~~~~~~ 142 (300)
.+.+...|+||+.||.... + ..+. .+.+..|+.....+.+.+.++-.+ ..++|++|+...
T Consensus 72 ~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~------- 144 (258)
T PRK07890 72 LVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL------- 144 (258)
T ss_pred HHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh-------
Confidence 1223468999999986421 1 1222 344667777777777666543211 125666665322
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
. .+.|....++.++--...+.+.+++++
T Consensus 145 ~--~~~~~~~~Y~~sK~a~~~l~~~~a~~~ 172 (258)
T PRK07890 145 R--HSQPKYGAYKMAKGALLAASQSLATEL 172 (258)
T ss_pred c--cCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 1 122322334555444445555566554
No 159
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=97.96 E-value=6.2e-05 Score=73.31 Aligned_cols=119 Identities=15% Similarity=0.252 Sum_probs=72.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhh---hhhhcc-----C-CcccEEEeCChh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME---LVDAAF-----P-LLKGVVATTDAV 76 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~d---l~~~~~-----~-~~~~v~~~~~~~ 76 (300)
|||+|+| +|+||..++..|+..|. + .+++.+|+++ ++.+..... +.+... . ...+++.+++..
T Consensus 2 m~I~ViG-~GyvGl~~A~~lA~~g~-g----~~V~gvD~~~--~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~ 73 (473)
T PLN02353 2 VKICCIG-AGYVGGPTMAVIALKCP-D----IEVVVVDISV--PRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVE 73 (473)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCC-C----CeEEEEECCH--HHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHH
Confidence 7999999 89999999999997642 1 2799999974 444332111 111000 0 123477888888
Q ss_pred hhcCCCcEEEEeCCCCCCCCC-cHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEe--cCchh
Q 022227 77 EACTGVNIAVMVGGFPRKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV--ANPAN 135 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~~g~-~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~--sNP~~ 135 (300)
+++++||++|++.+.|...+- +. + -..+...+.+.++.|.++.+++. +|+. |-|..
T Consensus 74 ~~i~~advi~I~V~TP~~~~g~~~-~-~~~Dls~v~~a~~~i~~~l~~~~-lVv~~STvp~G 132 (473)
T PLN02353 74 KHVAEADIVFVSVNTPTKTRGLGA-G-KAADLTYWESAARMIADVSKSDK-IVVEKSTVPVK 132 (473)
T ss_pred HHHhcCCEEEEEeCCCCCCCCCcC-C-CCCcHHHHHHHHHHHHhhCCCCc-EEEEeCCCCCC
Confidence 899999999999988864321 00 0 01233445566666666655443 3333 34544
No 160
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.95 E-value=7.1e-05 Score=66.88 Aligned_cols=155 Identities=13% Similarity=0.109 Sum_probs=83.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh-----hhhhhhhhhccCCcccEEEeCChh
Q 022227 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-----GVKMELVDAAFPLLKGVVATTDAV 76 (300)
Q Consensus 2 ~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~-----g~~~dl~~~~~~~~~~v~~~~~~~ 76 (300)
+++.++++|+||+|.+|..++..|++.|. ++++.|.++. ++. ....|+.+.... .. ......
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~-------~v~~~~~~~~--~~~~~~~~~~~~D~~~~~~~--~~--~~~~~~ 72 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGA-------NVVNADIHGG--DGQHENYQFVPTDVSSAEEV--NH--TVAEII 72 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCcc--ccccCceEEEEccCCCHHHH--HH--HHHHHH
Confidence 34557899999999999999999998875 7888887642 221 112233322100 00 000112
Q ss_pred hhcCCCcEEEEeCCCCCCC------------CCcH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHH
Q 022227 77 EACTGVNIAVMVGGFPRKE------------GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNAL 139 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~~------------g~~r---~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~ 139 (300)
+.+...|++|++||..... ..+. ...+..|+.....+.+.+.++-. +...+|++|+....
T Consensus 73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~--- 149 (266)
T PRK06171 73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL--- 149 (266)
T ss_pred HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc---
Confidence 2334689999999864210 1122 23466777666666655554321 12356666654321
Q ss_pred HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 140 ~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.+....++.++.-...+.+.+++++. +.+|+
T Consensus 150 ------~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~gi~ 182 (266)
T PRK06171 150 ------EGSEGQSCYAATKAALNSFTRSWAKELG--KHNIR 182 (266)
T ss_pred ------CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1122222345554444556666777664 34454
No 161
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.95 E-value=0.00011 Score=65.34 Aligned_cols=154 Identities=10% Similarity=0.083 Sum_probs=81.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (300)
+.++|.|+||+|.+|..++..|+..|. .+++++.+++.+.+. ..+.+.... ...++.-..+..+.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 83 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-------DIIITTHGTNWDETR---RLIEKEGRKVTFVQVDLTKPESAEKVVK 83 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCcHHHHHH---HHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 457899999999999999999998775 688887753222221 112111000 00111111111122
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecCchhhHHHHHHH
Q 022227 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
+...|++|+++|..... ..+. .+.+..|+.....+. +.+.+.. ...+|++|+....
T Consensus 84 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------- 154 (258)
T PRK06935 84 EALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG--SGKIINIASMLSF------- 154 (258)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC--CeEEEEECCHHhc-------
Confidence 23679999999874321 1122 234556665544444 4444432 2357777664321
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.+..-.++.++.....+.+.++++++ +.+|+
T Consensus 155 --~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~ 187 (258)
T PRK06935 155 --QGGKFVPAYTASKHGVAGLTKAFANELA--AYNIQ 187 (258)
T ss_pred --cCCCCchhhHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 1112112345555555667777777765 33444
No 162
>PRK06128 oxidoreductase; Provisional
Probab=97.95 E-value=0.0002 Score=65.43 Aligned_cols=153 Identities=17% Similarity=0.137 Sum_probs=84.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCC-------
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD------- 74 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~------- 74 (300)
.++|.||||+|.+|.+++..|+..|. ++++.+.+.+...++.....+...... ...++.-..+
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~-------~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA-------DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC-------EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHH
Confidence 46899999999999999999998875 677766543222222222222211100 0011110111
Q ss_pred hhhhcCCCcEEEEeCCCCC--CC--CCc---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCC
Q 022227 75 AVEACTGVNIAVMVGGFPR--KE--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~--~~--g~~---r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~ 147 (300)
..+.+...|++|+.||... .+ ..+ -...+..|+.....+++.+.++-.++.++|++|+.... .+
T Consensus 128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~---------~~ 198 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY---------QP 198 (300)
T ss_pred HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc---------CC
Confidence 1222346899999998642 11 112 23457788888878887776653334466666653321 11
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+..-.++.++.-...+.+.+++.+.
T Consensus 199 ~~~~~~Y~asK~a~~~~~~~la~el~ 224 (300)
T PRK06128 199 SPTLLDYASTKAAIVAFTKALAKQVA 224 (300)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhh
Confidence 12112355566655667777777653
No 163
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.94 E-value=0.00025 Score=62.00 Aligned_cols=153 Identities=13% Similarity=0.077 Sum_probs=85.0
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhh---hhhhhhhhhhhccCCcccEEEeCChhh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA---LNGVKMELVDAAFPLLKGVVATTDAVE 77 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~---l~g~~~dl~~~~~~~~~~v~~~~~~~~ 77 (300)
|..+.+++.|+||+|.+|++++..|++.|. +++++++++.... +.....|+.+. .....+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~D~~~~----------~~~~~~ 63 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGA-------QVYGVDKQDKPDLSGNFHFLQLDLSDD----------LEPLFD 63 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCC-------EEEEEeCCcccccCCcEEEEECChHHH----------HHHHHH
Confidence 566667899999999999999999998775 6888887532110 01111222221 011223
Q ss_pred hcCCCcEEEEeCCCCC--CC--CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHHHHHCCCC
Q 022227 78 ACTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~~~~~~~~ 148 (300)
.+...|++|+.||... .+ ..+. ...+..|+.....+.+.+...- .+...+++++..... .+.
T Consensus 64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~ 134 (235)
T PRK06550 64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASF---------VAG 134 (235)
T ss_pred hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc---------cCC
Confidence 3567899999998642 11 1122 2346677666555555544321 012356666643321 112
Q ss_pred CCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 149 p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
|....++.++.-...+.+.+++++. +..|+.
T Consensus 135 ~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~v 165 (235)
T PRK06550 135 GGGAAYTASKHALAGFTKQLALDYA--KDGIQV 165 (235)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 2222456666555566677777764 344553
No 164
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.93 E-value=0.00012 Score=64.76 Aligned_cols=119 Identities=20% Similarity=0.204 Sum_probs=66.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh---
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE--- 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~--- 77 (300)
+.++|.|+||+|++|++++..|+..|. +++++++++ ++++....++...... ...++.-..+..+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 73 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-------KVVIADLND--EAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGID 73 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 446899999999999999999998775 788898864 3333333333211100 0011111111112
Q ss_pred ----hcCCCcEEEEeCCCCCCCC---Cc---HHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCc
Q 022227 78 ----ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 78 ----a~~~aDvVi~~ag~~~~~g---~~---r~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
.+.+.|+||++||...... .+ -.+.+..|+.. ++.+.+.+++... .+++++|+.
T Consensus 74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~iss~ 141 (258)
T PRK12429 74 YAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG--GRIINMASV 141 (258)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC--eEEEEEcch
Confidence 2246899999998643211 11 12334556555 5666666665542 256666653
No 165
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.93 E-value=0.00019 Score=63.26 Aligned_cols=155 Identities=15% Similarity=0.096 Sum_probs=82.1
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCCh-----
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA----- 75 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~----- 75 (300)
|+.+.++|.||||+|.||.+++..|++.|. ++++++.++. +.+......+.........++.-..+.
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGA-------DIVGAGRSEP-SETQQQVEALGRRFLSLTADLSDIEAIKALVD 72 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCchH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 455678999999999999999999998875 7888887531 111111111100000000011101111
Q ss_pred --hhhcCCCcEEEEeCCCCCCCC---Cc---HHHHHHhhHHHHHHHHHHHhh----hcCCCeEEEEecCchhhHHHHHHH
Q 022227 76 --VEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQ----HAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 76 --~~a~~~aDvVi~~ag~~~~~g---~~---r~dl~~~N~~i~~~i~~~i~~----~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
.+.+...|++|++||...... .+ -.+.+..|+.....+.+.+.+ ... ...+|++++-..
T Consensus 73 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~-------- 143 (248)
T TIGR01832 73 SAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR-GGKIINIASMLS-------- 143 (248)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-CeEEEEEecHHh--------
Confidence 122346899999998743211 11 234466776666666655543 221 245666665321
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
+ .+.+....++.++.-...+.+.+++.+.
T Consensus 144 ~-~~~~~~~~Y~~sKaa~~~~~~~la~e~~ 172 (248)
T TIGR01832 144 F-QGGIRVPSYTASKHGVAGLTKLLANEWA 172 (248)
T ss_pred c-cCCCCCchhHHHHHHHHHHHHHHHHHhC
Confidence 1 1112122355555555566777777764
No 166
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.93 E-value=9.2e-05 Score=75.33 Aligned_cols=144 Identities=11% Similarity=0.065 Sum_probs=84.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEE--EEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH--MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-- 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~--L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~-- 79 (300)
..|||.||||+||+|++++..|...+. ++. .-|+ .+.. .....+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~-------~v~~~~~~l--------------~d~~-----------~v~~~i~~ 426 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGI-------AYEYGKGRL--------------EDRS-----------SLLADIRN 426 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCC-------eEEeecccc--------------ccHH-----------HHHHHHHh
Confidence 457999999999999999999987663 342 1121 1110 011111
Q ss_pred CCCcEEEEeCCCCCCCC-----CcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH----------HHHHH
Q 022227 80 TGVNIAVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----------ILKEF 144 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~g-----~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~----------~~~~~ 144 (300)
.+.|+|||+|+....+. .+..+....|+....++++.+++.+ ++++++|... +..+ -..+.
T Consensus 427 ~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g---~~~v~~Ss~~-v~~~~~~~~~~~~~p~~E~ 502 (668)
T PLN02260 427 VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG---LLMMNFATGC-IFEYDAKHPEGSGIGFKEE 502 (668)
T ss_pred hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC---CeEEEEcccc-eecCCcccccccCCCCCcC
Confidence 26899999998753221 2445678899999999999999874 4456664311 1000 00111
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~h 188 (300)
.+-.|+.+.++.+++..+++...+++. ..++..+++|.+
T Consensus 503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~~-----~~~r~~~~~~~~ 541 (668)
T PLN02260 503 DKPNFTGSFYSKTKAMVEELLREYDNV-----CTLRVRMPISSD 541 (668)
T ss_pred CCCCCCCChhhHHHHHHHHHHHhhhhh-----eEEEEEEecccC
Confidence 011123357888888887776555432 234444456543
No 167
>PRK07069 short chain dehydrogenase; Validated
Probab=97.93 E-value=0.00062 Score=59.92 Aligned_cols=155 Identities=21% Similarity=0.215 Sum_probs=85.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-Cc----ccEEEeCCh------
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LL----KGVVATTDA------ 75 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~----~~v~~~~~~------ 75 (300)
||+|+||+|++|.+++..|+..|. ++++.+.+. .++++....++.+.... .. .++.-..+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 72 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-------KVFLTDIND-AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQ 72 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc-chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence 489999999999999999998875 788998752 23343333233221100 00 011000011
Q ss_pred -hhhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 76 -VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 76 -~~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~----i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
.+.+...|+||+.||..... ..+. ...+..|+. ..+.+.+.+.+... ..++++|+....
T Consensus 73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~ii~~ss~~~~-------- 142 (251)
T PRK07069 73 AADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP--ASIVNISSVAAF-------- 142 (251)
T ss_pred HHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--cEEEEecChhhc--------
Confidence 12235689999999875421 1122 334566766 77778888876543 356666654321
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.|..-.++.++.-...+.+.+++++.-....++
T Consensus 143 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~ 177 (251)
T PRK07069 143 -KAEPDYTAYNASKAAVASLTKSIALDCARRGLDVR 177 (251)
T ss_pred -cCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEE
Confidence 11221223555555555666677777654333344
No 168
>PRK08643 acetoin reductase; Validated
Probab=97.92 E-value=0.00028 Score=62.55 Aligned_cols=154 Identities=16% Similarity=0.175 Sum_probs=82.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCC-------h
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD-------A 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~-------~ 75 (300)
++++|+||+|++|.+++..|++.|. +++++|.+. ++++....++.+.... ...++.-..+ .
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF-------KVAIVDYNE--ETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV 73 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4789999999999999999998875 788998753 3333233333221100 0011111111 1
Q ss_pred hhhcCCCcEEEEeCCCCCC-CC--CcH---HHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecCchhhHHHHHHHHC
Q 022227 76 VEACTGVNIAVMVGGFPRK-EG--MER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~-~g--~~r---~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
.+.+...|++|++||.... +- .+. ...+..|+.....+. +.+.+... +.+++++|+....
T Consensus 74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~--------- 143 (256)
T PRK08643 74 VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH-GGKIINATSQAGV--------- 143 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCEEEEECccccc---------
Confidence 1223468999999987432 11 111 234556765544444 33433322 3467777754321
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.|....++.++.-...+.+.+++++. +..|+
T Consensus 144 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~ 176 (256)
T PRK08643 144 VGNPELAVYSSTKFAVRGLTQTAARDLA--SEGIT 176 (256)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence 1223223456666655566677777653 34454
No 169
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00017 Score=63.82 Aligned_cols=156 Identities=14% Similarity=0.056 Sum_probs=84.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhhc-
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a~- 79 (300)
+.++|+|+||+|.+|+.++..|++.|. ++++++.++ +.++....++...... ...++.-..+..+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 76 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-------KVVVADRDA--AGGEETVALIREAGGEALFVACDVTRDAEVKALVE 76 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 457999999999999999999998764 788898863 3333222233221100 001111011112222
Q ss_pred ------CCCcEEEEeCCCCCCC----CCcH---HHHHHhhHHHHHHHHH----HHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 80 ------TGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 80 ------~~aDvVi~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~----~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
...|++|+.+|..... ..+. .+.+..|+.....+.+ .+.+.. ...++++|+....
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~sS~~~~------ 148 (253)
T PRK06172 77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG--GGAIVNTASVAGL------ 148 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEECchhhc------
Confidence 3459999999874321 2222 2345667666544443 343332 2356666653321
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
.+.+....++.++.-...+.+.+++++. +.+|+.
T Consensus 149 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v 182 (253)
T PRK06172 149 ---GAAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIRV 182 (253)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 1223222455566655677777777764 345553
No 170
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.92 E-value=0.0002 Score=64.42 Aligned_cols=171 Identities=18% Similarity=0.196 Sum_probs=101.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc----CCcccEEEeCCh---
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTDA--- 75 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~----~~~~~v~~~~~~--- 75 (300)
++.++++||||++-||..++..|+.+|+ .|+|+.++ +++|+..+.++++... ....++.-..+.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-------~liLvaR~--~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l 74 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-------NLILVARR--EDKLEALAKELEDKTGVEVEVIPADLSDPEALERL 74 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc--HHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence 4557899999999999999999999886 79999986 5888888888876431 001111111111
Q ss_pred ----hhhcCCCcEEEEeCCCCCCC------CCcHHHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 76 ----VEACTGVNIAVMVGGFPRKE------GMERKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 76 ----~~a~~~aDvVi~~ag~~~~~------g~~r~dl~~~N~~----i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
.+..-..|+.|..||..... ..+..+++.-|+- ..+.+.+.+.+.+. + -+|++++-+..
T Consensus 75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~-G-~IiNI~S~ag~----- 147 (265)
T COG0300 75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA-G-HIINIGSAAGL----- 147 (265)
T ss_pred HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-c-eEEEEechhhc-----
Confidence 11122589999999975422 1233567777764 44555666666543 3 58888753321
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceeeecc
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVN 197 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p~~s 197 (300)
. |. |..-+|+.|+---.-|...|..++ ....|+-..| .-|.+.=..|.
T Consensus 148 --~-p~-p~~avY~ATKa~v~~fSeaL~~EL--~~~gV~V~~v--~PG~~~T~f~~ 195 (265)
T COG0300 148 --I-PT-PYMAVYSATKAFVLSFSEALREEL--KGTGVKVTAV--CPGPTRTEFFD 195 (265)
T ss_pred --C-CC-cchHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEE--ecCcccccccc
Confidence 1 11 333355666555555555565555 4444543332 34454444443
No 171
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.91 E-value=0.00011 Score=70.38 Aligned_cols=79 Identities=23% Similarity=0.275 Sum_probs=53.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---------C-cccEEEeCCh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---------L-LKGVVATTDA 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---------~-~~~v~~~~~~ 75 (300)
|||+|+| +|.+|..++..|+..|. +|..+|+++ ++++...........+ . ..+++.+++.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~-------~V~~~d~~~--~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~ 70 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGH-------EVTGVDIDQ--EKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDY 70 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCC-------eEEEEECCH--HHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCH
Confidence 4899999 89999999999998774 799999864 3333211100000000 0 1236667777
Q ss_pred hhhcCCCcEEEEeCCCCCC
Q 022227 76 VEACTGVNIAVMVGGFPRK 94 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~ 94 (300)
.+++++||+||++...|..
T Consensus 71 ~~~~~~advvii~vpt~~~ 89 (411)
T TIGR03026 71 EDAIRDADVIIICVPTPLK 89 (411)
T ss_pred HHHHhhCCEEEEEeCCCCC
Confidence 7889999999999776643
No 172
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.00012 Score=66.06 Aligned_cols=143 Identities=7% Similarity=0.071 Sum_probs=77.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-CcccEEEeCChhhhc-----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEAC----- 79 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~~~v~~~~~~~~a~----- 79 (300)
++|.||||+|.+|.+++..|+..|. +|++.+.++ +.++. +.+.... ...++.-..+..+++
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~-------~Vi~~~r~~--~~~~~----l~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 71 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGW-------RVFATCRKE--EDVAA----LEAEGLEAFQLDYAEPESIAALVAQVLE 71 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHH----HHHCCceEEEccCCCHHHHHHHHHHHHH
Confidence 5799999999999999999998774 788888753 33321 1110000 000110000111111
Q ss_pred ---CCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCC
Q 022227 80 ---TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP 146 (300)
Q Consensus 80 ---~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~ 146 (300)
...|++|+.||..... ..+. ...+..|+.. .+.+.+.+++.+. .++|++|+... . .
T Consensus 72 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~--g~iv~isS~~~--------~-~ 140 (277)
T PRK05993 72 LSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQ--GRIVQCSSILG--------L-V 140 (277)
T ss_pred HcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCC--CEEEEECChhh--------c-C
Confidence 2579999999875321 1121 3356677665 6667777766542 35777765321 1 1
Q ss_pred CCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 147 SIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 147 ~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
..|....++.++.-...+...++.++
T Consensus 141 ~~~~~~~Y~asK~a~~~~~~~l~~el 166 (277)
T PRK05993 141 PMKYRGAYNASKFAIEGLSLTLRMEL 166 (277)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHh
Confidence 22322345555555555555555444
No 173
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.0003 Score=62.39 Aligned_cols=154 Identities=16% Similarity=0.127 Sum_probs=86.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE 77 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~ 77 (300)
|+.+.++++|+||+|.+|..++..|++.|. ++++.+.++ ++++....++.+.... ...++.-..+..+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGA-------KVVVGARRQ--AELDQLVAEIRAEGGEAVALAGDVRDEAYAKA 72 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 444557899999999999999999998875 788888753 4444333333321100 0001110111111
Q ss_pred -------hcCCCcEEEEeCCCCC--CC--CCcH---HHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEecCchhhHHH
Q 022227 78 -------ACTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNAL 139 (300)
Q Consensus 78 -------a~~~aDvVi~~ag~~~--~~--g~~r---~dl~~~N~~----i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~ 139 (300)
.+...|++|+.||... .+ ..+. ...+..|+. ..+.+.+.+.+.. ..++|++++....
T Consensus 73 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~--~~~iv~~sS~~~~--- 147 (254)
T PRK07478 73 LVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG--GGSLIFTSTFVGH--- 147 (254)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CceEEEEechHhh---
Confidence 2336899999998632 12 1222 334666764 4445555555543 2356766653321
Q ss_pred HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 140 ~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
. .+.|....++.++.-...+...++++++
T Consensus 148 ----~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~ 176 (254)
T PRK07478 148 ----T-AGFPGMAAYAASKAGLIGLTQVLAAEYG 176 (254)
T ss_pred ----c-cCCCCcchhHHHHHHHHHHHHHHHHHHh
Confidence 0 1233333567777766777777888765
No 174
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00042 Score=60.94 Aligned_cols=152 Identities=17% Similarity=0.117 Sum_probs=80.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV---- 76 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~---- 76 (300)
+.++++|+||+|.+|++++..|++.|. ++++++.++ ++++....++...... ...++.-..+..
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-------TVAFNDGLA--AEARELAAALEAAGGRAHAIAADLADPASVQRFFD 76 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 457899999999999999999998775 788888753 3343333333221100 000110001111
Q ss_pred ---hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHHHHHHHC
Q 022227 77 ---EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 77 ---~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
+.+.+.|+||+++|..... ..+. ...+..|......+.+.+.++.. +..++|++|.....
T Consensus 77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~--------- 147 (250)
T PRK12939 77 AAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTAL--------- 147 (250)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhc---------
Confidence 1125789999999874321 1122 22355677666666655543311 13367776653210
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+..-.++.++.-..++.+.+++++.
T Consensus 148 ~~~~~~~~y~~sK~~~~~~~~~l~~~~~ 175 (250)
T PRK12939 148 WGAPKLGAYVASKGAVIGMTRSLARELG 175 (250)
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 1112111234444445556666666654
No 175
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00019 Score=64.46 Aligned_cols=151 Identities=16% Similarity=0.067 Sum_probs=81.3
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCC------
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------ 74 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~------ 74 (300)
|+++.++|.||||+|.+|..++..|+..|. .+++.+.++ ++++....++.... ....++.-..+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~ 70 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGA-------RVAIGDLDE--ALAKETAAELGLVV-GGPLDVTDPASFAAFLD 70 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccce-EEEccCCCHHHHHHHHH
Confidence 677778999999999999999999998875 688888753 44432222221000 00000000001
Q ss_pred -hhhhcCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHH----HHHHHhhhcCCCeEEEEecCchhhHHHHHHH
Q 022227 75 -AVEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 75 -~~~a~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~----i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
..+.+.+.|++|+.||..... ..+ -...+..|+..... +.+.+.+.+. ..++++|.-...
T Consensus 71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--g~iv~isS~~~~------- 141 (273)
T PRK07825 71 AVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGR--GHVVNVASLAGK------- 141 (273)
T ss_pred HHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CEEEEEcCcccc-------
Confidence 122235789999999875321 111 12345667654444 4455544432 357777754321
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.|..-.++.++.-...+...++.++
T Consensus 142 --~~~~~~~~Y~asKaa~~~~~~~l~~el 168 (273)
T PRK07825 142 --IPVPGMATYCASKHAVVGFTDAARLEL 168 (273)
T ss_pred --CCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 122322234555544444555555554
No 176
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.89 E-value=9.1e-05 Score=66.37 Aligned_cols=153 Identities=14% Similarity=0.131 Sum_probs=82.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh-
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA- 78 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a- 78 (300)
.+.+++.|+||+|.||+.++..|+..|. +|+++|++. +.++....++...... ...++.-..+..++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~ 77 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA-------NVAVASRSQ--EKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAF 77 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence 3457899999999999999999998774 788998753 3333222223211100 00111111111222
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEecCchhhHHHHHHHHC
Q 022227 79 ------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 79 ------~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~-~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
+...|++|+.||..... ..+. ...+..|......+.+.+.+.- .++..++++|.....
T Consensus 78 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~--------- 148 (264)
T PRK07576 78 AQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAF--------- 148 (264)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhc---------
Confidence 34579999998754211 1222 2345577766666665554321 112367777765321
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|....++.++.-..++...++..+.
T Consensus 149 ~~~~~~~~Y~asK~a~~~l~~~la~e~~ 176 (264)
T PRK07576 149 VPMPMQAHVCAAKAGVDMLTRTLALEWG 176 (264)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 1122222355555555667677777664
No 177
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.89 E-value=0.00018 Score=59.98 Aligned_cols=64 Identities=20% Similarity=0.385 Sum_probs=46.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
++||++|| .|.+|+.++..|+..|+ ++..+|+.+ ++++. +.+. ......+..++++++|+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~-------~v~~~d~~~--~~~~~----~~~~------g~~~~~s~~e~~~~~dv 60 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGY-------EVTVYDRSP--EKAEA----LAEA------GAEVADSPAEAAEQADV 60 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT-------EEEEEESSH--HHHHH----HHHT------TEEEESSHHHHHHHBSE
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCC-------eEEeeccch--hhhhh----hHHh------hhhhhhhhhhHhhcccc
Confidence 37999999 89999999999998875 899999863 43332 2221 13455688899999999
Q ss_pred EEEe
Q 022227 85 AVMV 88 (300)
Q Consensus 85 Vi~~ 88 (300)
||.+
T Consensus 61 vi~~ 64 (163)
T PF03446_consen 61 VILC 64 (163)
T ss_dssp EEE-
T ss_pred eEee
Confidence 9987
No 178
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00018 Score=62.37 Aligned_cols=115 Identities=21% Similarity=0.239 Sum_probs=62.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC---C
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---G 81 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~---~ 81 (300)
++++.|+||+|++|+.++..|+++ . ++++++++. +.++....++.+.. ....++.-..+..++++ +
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-------TLLLGGRPA--ERLDELAAELPGAT-PFPVDLTDPEAIAAAVEQLGR 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-------CEEEEeCCH--HHHHHHHHHhccce-EEecCCCCHHHHHHHHHhcCC
Confidence 468999999999999999999876 3 688888753 22221111111000 00011111112334443 6
Q ss_pred CcEEEEeCCCCCCCC---CcH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCc
Q 022227 82 VNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 82 aDvVi~~ag~~~~~g---~~r---~dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP 133 (300)
.|+||+++|...... .+. ...+..|.... +.+.+.+++. ..+++++|..
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss~ 130 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINSG 130 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcch
Confidence 899999998753211 121 23355666664 4444444443 2356666643
No 179
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00032 Score=62.60 Aligned_cols=122 Identities=25% Similarity=0.263 Sum_probs=69.3
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEe-CCh---h
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA---V 76 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~-~~~---~ 76 (300)
|.++.++++|+||+|.+|..++..|+..|. +|+++++++ +.++....++.... ...-+... ++. .
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~--~~~~~~~D~~d~~~~~ 69 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGA-------RLLLVGRNA--EKLEALAARLPYPG--RHRWVVADLTSEAGRE 69 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHhcCC--ceEEEEccCCCHHHHH
Confidence 677778999999999999999999998875 788998763 33332222221100 00000000 011 0
Q ss_pred ------hhcCCCcEEEEeCCCCCCCC---Cc---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCc
Q 022227 77 ------EACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANP 133 (300)
Q Consensus 77 ------~a~~~aDvVi~~ag~~~~~g---~~---r~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP 133 (300)
..+...|++|++||...... .+ -.+.+..|+.....+.+.+.++- .+...++++++.
T Consensus 70 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~ 140 (263)
T PRK09072 70 AVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGST 140 (263)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecCh
Confidence 11356899999998753211 11 13456677776666666654421 112356666653
No 180
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.89 E-value=9.3e-05 Score=65.07 Aligned_cols=119 Identities=19% Similarity=0.119 Sum_probs=66.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhhc-
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a~- 79 (300)
+.++|+|+||+|++|.+++..|+++|. +|++++++. +++.....++...... ...++.-..+..+.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 75 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-------EVIVVDICG--DDAAATAELVEAAGGKARARQVDVRDRAALKAAVA 75 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 457899999999999999999998875 688888763 3333222223211100 000110011112222
Q ss_pred ------CCCcEEEEeCCCCCC-C--CCcH---HHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEecCc
Q 022227 80 ------TGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANP 133 (300)
Q Consensus 80 ------~~aDvVi~~ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~----~~~~~~~~viv~sNP 133 (300)
...|+||+++|.... + ..+. .+.+..|+.....+.+.+. +... .++|++|.-
T Consensus 76 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~ii~~ss~ 143 (251)
T PRK12826 76 AGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG--GRIVLTSSV 143 (251)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--cEEEEEech
Confidence 368999999876532 1 1222 3356677776666666553 3332 356666643
No 181
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00051 Score=61.39 Aligned_cols=151 Identities=14% Similarity=0.056 Sum_probs=84.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeCChhhh--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA-- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~~~~~a-- 78 (300)
+.+++.|+||+|++|.+++..|+.+|. ++++++++. ++++....++....... ..++.-..+..++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 79 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-------DVLIAARTE--SQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAG 79 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 457899999999999999999998875 788998863 33433333332111000 0011000011111
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHHHhh----hcCCCeEEEEecCchhhHHHHHHH
Q 022227 79 -----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQ----HAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~----~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
+...|+||+.||..... ..+ -.+.+..|......+.+.+.+ ... ...++++|+-...
T Consensus 80 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~------- 151 (263)
T PRK07814 80 QAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGR------- 151 (263)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEcccccc-------
Confidence 24689999999864321 111 234466777766666666543 232 2457777653221
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+....++.++.-...+...++.++.
T Consensus 152 --~~~~~~~~Y~~sK~a~~~~~~~~~~e~~ 179 (263)
T PRK07814 152 --LAGRGFAAYGTAKAALAHYTRLAALDLC 179 (263)
T ss_pred --CCCCCCchhHHHHHHHHHHHHHHHHHHC
Confidence 1123223456666655667777777764
No 182
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00013 Score=65.70 Aligned_cols=147 Identities=14% Similarity=0.129 Sum_probs=75.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCC-------hhhh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-------AVEA 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~-------~~~a 78 (300)
++|.|+||+|++|++++..|++.|. ++++.+.++ +.++.....+.........++.-..+ ..+.
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD-------RVVATARDT--ATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH 74 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999998764 688888753 33321111110000000000000001 1122
Q ss_pred cCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCC
Q 022227 79 CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKEFAPSI 148 (300)
Q Consensus 79 ~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~ 148 (300)
+...|.||++||..... ..+ -.+.+..|+.....+. +.+++... + ++|++|..... .+.
T Consensus 75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~-~iv~vsS~~~~---------~~~ 143 (275)
T PRK08263 75 FGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRS-G-HIIQISSIGGI---------SAF 143 (275)
T ss_pred cCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-C-EEEEEcChhhc---------CCC
Confidence 34679999999975321 112 2345667776654444 44455432 3 56666643211 122
Q ss_pred CCCcEEeeehhhHHHHHHHHHHHc
Q 022227 149 PAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 149 p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
|....++.++.-...+...++.++
T Consensus 144 ~~~~~Y~~sKaa~~~~~~~la~e~ 167 (275)
T PRK08263 144 PMSGIYHASKWALEGMSEALAQEV 167 (275)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHh
Confidence 322234555554445555666654
No 183
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.87 E-value=0.00025 Score=62.51 Aligned_cols=156 Identities=14% Similarity=0.106 Sum_probs=79.6
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCC---
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD--- 74 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~--- 74 (300)
|+++.++|.|+||+|+||++++..|++.|. ++++...+. .+.+.....++...... ...++.-..+
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 73 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGS-------LVVVNAKKR-AEEMNETLKMVKENGGEGIGVLADVSTREGCET 73 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHH
Confidence 345567999999999999999999998775 555544321 12222211111111000 0001110111
Q ss_pred ----hhhhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 75 ----AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 75 ----~~~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
..+.+...|+||++||..... ..+. .+.+..|+.....+.+.+.++-.+..++|++|+-.. +
T Consensus 74 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--------~ 145 (252)
T PRK06077 74 LAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG--------I 145 (252)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc--------c
Confidence 112234679999999863211 1222 234556665555555555543222235666664221 1
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+....++.++.....+...++++++
T Consensus 146 -~~~~~~~~Y~~sK~~~~~~~~~l~~~~~ 173 (252)
T PRK06077 146 -RPAYGLSIYGAMKAAVINLTKYLALELA 173 (252)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 1233233345555555666777777765
No 184
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.87 E-value=4.7e-05 Score=67.77 Aligned_cols=115 Identities=14% Similarity=0.085 Sum_probs=64.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEE-eCChhhhc-CC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTDAVEAC-TG 81 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~-~~~~~~a~-~~ 81 (300)
.++||+|+||+|++|+.++..|+..+. +|+++.++. +++.....+-.... ....++.- ..+..+++ .+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~~~~~~~~~~-~~~~Dl~d~~~~l~~~~~~~ 85 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-------AVKAGVRDV--DKAKTSLPQDPSLQ-IVRADVTEGSDKLVEAIGDD 85 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-------EEEEEecCH--HHHHHhcccCCceE-EEEeeCCCCHHHHHHHhhcC
Confidence 457999999999999999999998764 566665542 22211100000000 00001100 01234556 68
Q ss_pred CcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 82 aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
+|+||+++|.....+. .+....|......+++.+.+... .++|++|.
T Consensus 86 ~d~vi~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~--~~iV~iSS 132 (251)
T PLN00141 86 SDAVICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGV--TRFILVSS 132 (251)
T ss_pred CCEEEECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCC--CEEEEEcc
Confidence 9999998876432111 11123455667788888877643 25565553
No 185
>PLN02996 fatty acyl-CoA reductase
Probab=97.87 E-value=0.00028 Score=69.27 Aligned_cols=122 Identities=18% Similarity=0.125 Sum_probs=69.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchh----hhhhh--hhhhhhh-------ccC--CcccE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE----ALNGV--KMELVDA-------AFP--LLKGV 69 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~----~l~g~--~~dl~~~-------~~~--~~~~v 69 (300)
.++|.||||+||+|++++..|+...- +. .+|+++.+.+..+ ++... ..++.+. .+. ...++
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~---~v-~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQP---NV-KKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCC---CC-CEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 46899999999999999999886421 11 1566665543211 11100 0111110 000 00111
Q ss_pred EE-eCC-------------hhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 70 VA-TTD-------------AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 70 ~~-~~~-------------~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
+. ..| ..+.++++|+|||+|+.... ..+..+....|+....++++.+.+..... +++.+|.
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k-~~V~vST 161 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKCVKVK-MLLHVST 161 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhcCCCC-eEEEEee
Confidence 11 111 23456789999999986542 33456677889999999999988753212 3555443
No 186
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00015 Score=63.70 Aligned_cols=149 Identities=20% Similarity=0.168 Sum_probs=80.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc---C
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC---T 80 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~---~ 80 (300)
+.++++|+||+|++|.+++..|+..|. ++++++.++ ++++.....+ ... ....++.-..+..+++ .
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~-~~~-~~~~D~~~~~~v~~~~~~~~ 76 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-------RVVAAARNA--AALDRLAGET-GCE-PLRLDVGDDAAIRAALAAAG 76 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHh-CCe-EEEecCCCHHHHHHHHHHhC
Confidence 457899999999999999999998774 788898753 3332111111 000 0000110011122222 3
Q ss_pred CCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcC-C--CeEEEEecCchhhHHHHHHHHCCCCCCC
Q 022227 81 GVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA-P--NCKVLVVANPANTNALILKEFAPSIPAK 151 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~-~--~~~viv~sNP~~~~~~~~~~~~~~~p~~ 151 (300)
..|+||+.+|..... ..+. .+.+..|+.....+.+.+.+... + ..++|++|+.... .+.+..
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~~ 147 (245)
T PRK07060 77 AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL---------VGLPDH 147 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc---------CCCCCC
Confidence 589999999875321 1122 23456777777677666655321 1 1356666643321 112222
Q ss_pred cEEeeehhhHHHHHHHHHHHc
Q 022227 152 NITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 152 ~i~~~t~ld~~R~~~~la~~l 172 (300)
..++.++.-..++.+.+++.+
T Consensus 148 ~~y~~sK~a~~~~~~~~a~~~ 168 (245)
T PRK07060 148 LAYCASKAALDAITRVLCVEL 168 (245)
T ss_pred cHhHHHHHHHHHHHHHHHHHH
Confidence 234555555566666677665
No 187
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.86 E-value=0.00011 Score=61.97 Aligned_cols=99 Identities=16% Similarity=0.231 Sum_probs=65.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh---hh---hhhhhhhccCCcccEEEeCChhhhc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN---GV---KMELVDAAFPLLKGVVATTDAVEAC 79 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~---g~---~~dl~~~~~~~~~~v~~~~~~~~a~ 79 (300)
|||+||||+|.+|+.++..+..+|. +++-+-+++ .++. +. ..|+.+.. ...+++
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH-------eVTAivRn~--~K~~~~~~~~i~q~Difd~~-----------~~a~~l 60 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH-------EVTAIVRNA--SKLAARQGVTILQKDIFDLT-----------SLASDL 60 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC-------eeEEEEeCh--HhccccccceeecccccChh-----------hhHhhh
Confidence 6999999999999999999999875 666665543 3332 21 22333322 445789
Q ss_pred CCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
+|-|+||-+-|.+. ++. ..+. .+-...+.+.++..+. .+++|++.
T Consensus 61 ~g~DaVIsA~~~~~-~~~--~~~~---~k~~~~li~~l~~agv--~RllVVGG 105 (211)
T COG2910 61 AGHDAVISAFGAGA-SDN--DELH---SKSIEALIEALKGAGV--PRLLVVGG 105 (211)
T ss_pred cCCceEEEeccCCC-CCh--hHHH---HHHHHHHHHHHhhcCC--eeEEEEcC
Confidence 99999999877653 222 1222 2335566777777653 47888875
No 188
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00087 Score=59.31 Aligned_cols=153 Identities=15% Similarity=0.101 Sum_probs=82.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeC-------
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT------- 73 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~------- 73 (300)
+.+++.||||+|++|++++..|+..|. ++++.+... .+.++....++...... ...++.-..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNR-KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYS 74 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcCCC-HHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHH
Confidence 346899999999999999999998875 577765322 23333222233211000 000000000
Q ss_pred Chhhh------cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 74 DAVEA------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 74 ~~~~a------~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
+..+. ....|++|+.||..... ..+. ...+..|+.....+.+.+.+.-.+..++|++|+-...
T Consensus 75 ~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----- 149 (252)
T PRK12747 75 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR----- 149 (252)
T ss_pred HHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc-----
Confidence 01111 12689999999864211 1122 2345677666666665554432223467777754321
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|....|+.++.-...+.+.++.+++
T Consensus 150 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~ 177 (252)
T PRK12747 150 ----ISLPDFIAYSMTKGAINTMTFTLAKQLG 177 (252)
T ss_pred ----cCCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence 1223223466677767777777888775
No 189
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.85 E-value=0.00022 Score=63.43 Aligned_cols=147 Identities=17% Similarity=0.099 Sum_probs=78.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV---- 76 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~---- 76 (300)
+.+++.||||+|++|++++..|++.|. +++++|+++. +.....++...... ...++.-..+..
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-------~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-------RVVLVDRSEL---VHEVAAELRAAGGEALALTADLETYAGAQAAMA 76 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCchH---HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHH
Confidence 346899999999999999999998875 7888887531 11111122111000 000110000111
Q ss_pred ---hhcCCCcEEEEeCCCCC--CC--CCcHH---HHHHhhHH----HHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 77 ---EACTGVNIAVMVGGFPR--KE--GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 77 ---~a~~~aDvVi~~ag~~~--~~--g~~r~---dl~~~N~~----i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
+.+...|++|+.||... .+ ..+.. ..+..|+- .++.+.+.+.+... .++|++|....
T Consensus 77 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~------- 147 (260)
T PRK12823 77 AAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGG--GAIVNVSSIAT------- 147 (260)
T ss_pred HHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CeEEEEcCccc-------
Confidence 12346899999998532 11 12222 23445543 44556666655432 35677665321
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
+ + +....++.++.-...+.+.+++++.
T Consensus 148 -~--~-~~~~~Y~~sK~a~~~~~~~la~e~~ 174 (260)
T PRK12823 148 -R--G-INRVPYSAAKGGVNALTASLAFEYA 174 (260)
T ss_pred -c--C-CCCCccHHHHHHHHHHHHHHHHHhc
Confidence 0 1 1112356666666677777887763
No 190
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.85 E-value=0.00026 Score=62.11 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=66.3
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEE-ecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChh
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAV 76 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~-D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~ 76 (300)
|..+.++|.|+||+|++|+.++..|++.|. +++++ +.++ ++++....++..... ....++.-..+..
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~-------~v~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 71 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGA-------KVVIAYDINE--EAAQELLEEIKEEGGDAIAVKADVSSEEDVE 71 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 555667999999999999999999988764 56666 7753 233222222221000 0000000000111
Q ss_pred hh-------cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCch
Q 022227 77 EA-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPA 134 (300)
Q Consensus 77 ~a-------~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~ 134 (300)
+. +...|+||+.+|..... ..+. ...+..|......+.+.+..... +...+|++|...
T Consensus 72 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~ 144 (247)
T PRK05565 72 NLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIW 144 (247)
T ss_pred HHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHh
Confidence 11 23789999999875211 1122 23456677765555555543211 112466666543
No 191
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.85 E-value=9.7e-05 Score=64.65 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=33.2
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
|+.+.++|.|+||+|++|+.++..|++.|. +|++++.++
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~-------~V~~~~r~~ 39 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGA-------QVCINSRNE 39 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 665667999999999999999999998875 788888753
No 192
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.85 E-value=0.00022 Score=62.94 Aligned_cols=156 Identities=15% Similarity=0.085 Sum_probs=81.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCch---hhhhhhhhhhhhhccCCcccEEEeCChhhhc
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA---EALNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~---~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~ 79 (300)
++.+++.|+||+|++|+.++..|++.|. ++++++.+... ..+.....|+.+.... .. ......+.+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~--~~~~~~~~~ 74 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGA-------KVIGFDQAFLTQEDYPFATFVLDVSDAAAV--AQ--VCQRLLAET 74 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecchhhhcCCceEEEEecCCCHHHH--HH--HHHHHHHHc
Confidence 3457899999999999999999998875 68888875300 0011112233221100 00 000112223
Q ss_pred CCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHHHHHCCCCCCC
Q 022227 80 TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSIPAK 151 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~~~~~~~~p~~ 151 (300)
...|+||+++|..... ..+. ...+..|......+++.+..+- .+..+++++|+-.. . .+.+..
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~-------~--~~~~~~ 145 (252)
T PRK08220 75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA-------H--VPRIGM 145 (252)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh-------c--cCCCCC
Confidence 4579999999875321 1121 3346677776666665553321 01235666665321 0 111211
Q ss_pred cEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 152 NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 152 ~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
..++.++.-...+.+.+++++. +.+|+
T Consensus 146 ~~Y~~sK~a~~~~~~~la~e~~--~~~i~ 172 (252)
T PRK08220 146 AAYGASKAALTSLAKCVGLELA--PYGVR 172 (252)
T ss_pred chhHHHHHHHHHHHHHHHHHhh--HhCeE
Confidence 2345555555566667777653 33454
No 193
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.84 E-value=0.00014 Score=65.66 Aligned_cols=177 Identities=13% Similarity=0.097 Sum_probs=104.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-cCCc-ccEEEeCChhhhcC--C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLL-KGVVATTDAVEACT--G 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~~~~-~~v~~~~~~~~a~~--~ 81 (300)
|++.|||++||||+++...++...- ..+++.+|.-.=...++.. .++.+.. ..+. ..+.-.......++ +
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~-----d~~v~~~DkLTYAgn~~~l-~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~ 74 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHP-----DDHVVNLDKLTYAGNLENL-ADVEDSPRYRFVQGDICDRELVDRLFKEYQ 74 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCC-----CceEEEEecccccCCHHHH-HhhhcCCCceEEeccccCHHHHHHHHHhcC
Confidence 5899999999999999988886532 1257788753211111111 2233321 1111 11111112344455 6
Q ss_pred CcEEEEeCCCCC--CCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHH------HHHHHCCCCCCCcE
Q 022227 82 VNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL------ILKEFAPSIPAKNI 153 (300)
Q Consensus 82 aDvVi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~------~~~~~~~~~p~~~i 153 (300)
.|+|++.|.-.. +.=....++++.|+-.+..+.++++++.. ..+++-+|.= .+-.. .+.+. +.+.|..-
T Consensus 75 ~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~-~frf~HISTD-EVYG~l~~~~~~FtE~-tp~~PsSP 151 (340)
T COG1088 75 PDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWG-KFRFHHISTD-EVYGDLGLDDDAFTET-TPYNPSSP 151 (340)
T ss_pred CCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcc-cceEEEeccc-cccccccCCCCCcccC-CCCCCCCC
Confidence 899999876432 11223467899999999999999999964 2466666531 11111 11122 34445566
Q ss_pred EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCceee
Q 022227 154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194 (300)
Q Consensus 154 ~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~p 194 (300)
++-++-.+--+.+...+.+|++..-.++-+ |-|.-|+|
T Consensus 152 YSASKAasD~lVray~~TYglp~~ItrcSN---NYGPyqfp 189 (340)
T COG1088 152 YSASKAASDLLVRAYVRTYGLPATITRCSN---NYGPYQFP 189 (340)
T ss_pred cchhhhhHHHHHHHHHHHcCCceEEecCCC---CcCCCcCc
Confidence 677766666778888899999876665544 44455555
No 194
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.84 E-value=0.00021 Score=65.99 Aligned_cols=104 Identities=19% Similarity=0.257 Sum_probs=64.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc----cCCcccEEEeCChhhhcCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~----~~~~~~v~~~~~~~~a~~~ 81 (300)
|||+|+| +|.+|+.++..|...|. ++.++|+++ +.++....+..+.. ......+...++..+++++
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLARNGH-------DVTLWARDP--EQAAEINADRENPRYLPGIKLPDNLRATTDLAEALAD 71 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhC
Confidence 6999999 79999999999998764 789999863 33332221110100 0111235556677778899
Q ss_pred CcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 82 aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
+|+||++.-. ..+.++.+.+..+..++..+|..+|.++
T Consensus 72 ~D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~ 109 (325)
T PRK00094 72 ADLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE 109 (325)
T ss_pred CCEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence 9999998421 1233444455554444556777777554
No 195
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=97.82 E-value=8.9e-05 Score=67.05 Aligned_cols=159 Identities=13% Similarity=0.168 Sum_probs=99.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC--CCc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN 83 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~--~aD 83 (300)
|||.|+|++|++|+.+...|. .+. ++.-.|..+ +|+.+.. ...+.++ .-|
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~-------~v~a~~~~~---------~Ditd~~-----------~v~~~i~~~~PD 52 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF-------EVIATDRAE---------LDITDPD-----------AVLEVIRETRPD 52 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc-------eEEeccCcc---------ccccChH-----------HHHHHHHhhCCC
Confidence 469999999999999988776 322 676676531 5665544 2344455 359
Q ss_pred EEEEeCCCCCC--CCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC-ch-hhHHHHHHHHCCCC-CCCcEEeeeh
Q 022227 84 IAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PA-NTNALILKEFAPSI-PAKNITCLTR 158 (300)
Q Consensus 84 vVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN-P~-~~~~~~~~~~~~~~-p~~~i~~~t~ 158 (300)
+||++|....- ...++..-...|+....++++...+.+ +++|.+|. -+ |-...--.+. ... .|-+++|.|+
T Consensus 53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g---a~lVhiSTDyVFDG~~~~~Y~E-~D~~~P~nvYG~sK 128 (281)
T COG1091 53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG---ARLVHISTDYVFDGEKGGPYKE-TDTPNPLNVYGRSK 128 (281)
T ss_pred EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC---CeEEEeecceEecCCCCCCCCC-CCCCCChhhhhHHH
Confidence 99999988653 233455567889999999999999985 56777763 22 1000000000 111 1245888888
Q ss_pred hhHHHHHHHHHHHcCCCCCCeEEEEEecCCCCcee-eecccee
Q 022227 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY-PDVNHAT 200 (300)
Q Consensus 159 ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~~~~-p~~s~a~ 200 (300)
+-.+.+... .+-+.--+|.-.|+|++|.+.+ ..++.+.
T Consensus 129 l~GE~~v~~----~~~~~~I~Rtswv~g~~g~nFv~tml~la~ 167 (281)
T COG1091 129 LAGEEAVRA----AGPRHLILRTSWVYGEYGNNFVKTMLRLAK 167 (281)
T ss_pred HHHHHHHHH----hCCCEEEEEeeeeecCCCCCHHHHHHHHhh
Confidence 876655433 3334445566667999996544 3444443
No 196
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.82 E-value=0.00012 Score=66.92 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=59.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh---hhhhhccCCcccEEEeCChhhhcCCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~---dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
|||+|+| +|.+|..++..|.+.|. ++.+++. + ++++.... .+..............++..++.+++
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~-------~V~~~~r-~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGR-------DVTFLVR-P--KRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPF 69 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCC-------ceEEEec-H--HHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCC
Confidence 5899999 79999999999998763 6889987 2 22222111 11100000001112234555556899
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhH
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN 137 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~ 137 (300)
|+||++.-.+ ...++++.+..+-.++..+|.+.|..+..
T Consensus 70 d~vilavk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~ 108 (305)
T PRK12921 70 DLVILAVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQL 108 (305)
T ss_pred CEEEEEeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChH
Confidence 9999984211 12234444444433455677788987643
No 197
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.82 E-value=0.0002 Score=63.82 Aligned_cols=154 Identities=16% Similarity=0.124 Sum_probs=81.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChh------
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV------ 76 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~------ 76 (300)
++.+++.|+||+|.||.+++..|+..|. +|+++|.++ ++++....++.........++.-..+..
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGA-------RVAVLERSA--EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence 4567899999999999999999998875 788898763 3333222222110000000110000111
Q ss_pred -hhcCCCcEEEEeCCCCCC--C--CCcHH-------HHHHhhHHHHHHHHHHHhhhc-CCCeEEEEecCchhhHHHHHHH
Q 022227 77 -EACTGVNIAVMVGGFPRK--E--GMERK-------DVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 77 -~a~~~aDvVi~~ag~~~~--~--g~~r~-------dl~~~N~~i~~~i~~~i~~~~-~~~~~viv~sNP~~~~~~~~~~ 143 (300)
+.+...|++|+.||.... + ..+.. ..+..|+.....+.+.+.+.- .+...+|++++-...
T Consensus 75 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------- 147 (263)
T PRK06200 75 VDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF------- 147 (263)
T ss_pred HHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc-------
Confidence 223468999999997431 1 22221 234456554444444433221 012346665543211
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHcCC
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v 174 (300)
...+....++.++.-...+.+.+|++++-
T Consensus 148 --~~~~~~~~Y~~sK~a~~~~~~~la~el~~ 176 (263)
T PRK06200 148 --YPGGGGPLYTASKHAVVGLVRQLAYELAP 176 (263)
T ss_pred --CCCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 11122224666766667778888888753
No 198
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.81 E-value=0.00021 Score=63.30 Aligned_cols=121 Identities=13% Similarity=0.144 Sum_probs=68.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh-
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA- 78 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a- 78 (300)
.+.++|.|+||+|.+|+.++..|+..|. .|++++.++ +.++....++...... ...++.-..+...+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 79 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA-------HVLVNGRNA--ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAF 79 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 3567899999999999999999998775 789998863 3343333333221100 00111111111222
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEecCch
Q 022227 79 ------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPA 134 (300)
Q Consensus 79 ------~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~----~~~~~~~~viv~sNP~ 134 (300)
+...|++|+.+|..... ..+. ...+..|+.....+.+.+. +.. ...+|++|+..
T Consensus 80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~ 149 (256)
T PRK06124 80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG--YGRIIAITSIA 149 (256)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEeech
Confidence 23469999999864321 1122 2346677666666664443 332 23577777643
No 199
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.81 E-value=0.00036 Score=61.16 Aligned_cols=122 Identities=16% Similarity=0.197 Sum_probs=66.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (300)
+.+++.|+||+|.+|.+++..|+..|. +|++++++. +.++....++...... ...++.-..+..++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-------NVGLLARTE--ENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIE 76 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHH
Confidence 346899999999999999999998875 788998863 3333222233211000 00011001111222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCch
Q 022227 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPA 134 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~ 134 (300)
+.+.|+||+++|..... ..+. ...+..|+.....+.+.+..+. ....++++++...
T Consensus 77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~ 145 (239)
T PRK07666 77 QLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTA 145 (239)
T ss_pred HHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchh
Confidence 24789999999875321 1121 2345667665555555544321 0123566666544
No 200
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.81 E-value=0.00021 Score=66.89 Aligned_cols=81 Identities=25% Similarity=0.306 Sum_probs=50.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCC-CCeEEEEEecCC---chhhhhhhhhhhhhhc-c---CCcccEEEeCChhhh
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTD-QPVILHMLDIPP---AAEALNGVKMELVDAA-F---PLLKGVVATTDAVEA 78 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~-~~~~l~L~D~~~---~~~~l~g~~~dl~~~~-~---~~~~~v~~~~~~~~a 78 (300)
||+|+| +|..|++++..|...+...+. ...+|.|+.+++ +++..+....+-.... . .+..+++.++|+.++
T Consensus 1 kI~VIG-aG~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVG-SGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 699999 799999999999876622110 001788888742 1121111111111111 1 124567888899999
Q ss_pred cCCCcEEEEe
Q 022227 79 CTGVNIAVMV 88 (300)
Q Consensus 79 ~~~aDvVi~~ 88 (300)
+++||+||++
T Consensus 80 l~~ADiIIlA 89 (342)
T TIGR03376 80 AKGADILVFV 89 (342)
T ss_pred HhcCCEEEEE
Confidence 9999998887
No 201
>PRK12742 oxidoreductase; Provisional
Probab=97.81 E-value=0.00046 Score=60.32 Aligned_cols=155 Identities=10% Similarity=0.139 Sum_probs=81.3
Q ss_pred CC-CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhh--
Q 022227 1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-- 77 (300)
Q Consensus 1 m~-~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~-- 77 (300)
|+ ++.++|.|+||+|.||+.++..|++.|. ++++.+... .+.++....++. .. ....++.-.....+
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~l~~~~~-~~-~~~~D~~~~~~~~~~~ 70 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGA-------NVRFTYAGS-KDAAERLAQETG-AT-AVQTDSADRDAVIDVV 70 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCC-HHHHHHHHHHhC-Ce-EEecCCCCHHHHHHHH
Confidence 54 3457899999999999999999998774 676665432 222221111110 00 00000000001111
Q ss_pred -hcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCC
Q 022227 78 -ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (300)
Q Consensus 78 -a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~ 150 (300)
.+...|++|++||..... ..+. ...+..|+.....+...+.+.-.+...+|+++.-... . ...|.
T Consensus 71 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~------~--~~~~~ 142 (237)
T PRK12742 71 RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD------R--MPVAG 142 (237)
T ss_pred HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc------c--CCCCC
Confidence 234589999999875321 1121 3345667665555544443332123456666653210 0 11232
Q ss_pred CcEEeeehhhHHHHHHHHHHHcC
Q 022227 151 KNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 151 ~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...++.++.....+...++++++
T Consensus 143 ~~~Y~~sKaa~~~~~~~la~~~~ 165 (237)
T PRK12742 143 MAAYAASKSALQGMARGLARDFG 165 (237)
T ss_pred CcchHHhHHHHHHHHHHHHHHHh
Confidence 33566777766777777888765
No 202
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00031 Score=62.55 Aligned_cols=153 Identities=18% Similarity=0.200 Sum_probs=80.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh--
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE-- 77 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~-- 77 (300)
++.++++|+||+|.+|++++..|+..|. ++++++.++ + +.....++...... ...++.-..+..+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~-------~Vv~~~r~~--~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~ 73 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGA-------NLILLDISP--E-IEKLADELCGRGHRCTAVVADVRDPASVAAAI 73 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCH--H-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence 3567899999999999999999998875 789998763 1 11111112110000 0001100001111
Q ss_pred -----hcCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHHHHH
Q 022227 78 -----ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 78 -----a~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
.+...|+||+.||..... ..+ ..+.+..|+.....+.+.+.++. .+...++++|+.... .
T Consensus 74 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~ 146 (263)
T PRK08226 74 KRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD-------M 146 (263)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc-------c
Confidence 134579999999864211 111 23346677776666665544321 112356666653210 0
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|....++.++.-...+.+.+++.+.
T Consensus 147 -~~~~~~~~Y~~sK~a~~~~~~~la~~~~ 174 (263)
T PRK08226 147 -VADPGETAYALTKAAIVGLTKSLAVEYA 174 (263)
T ss_pred -cCCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence 1122222455555555566677777764
No 203
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00026 Score=63.02 Aligned_cols=157 Identities=16% Similarity=0.101 Sum_probs=81.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-CcccEEEeCChhhh------
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEA------ 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~~~v~~~~~~~~a------ 78 (300)
+++.|+||+|++|+.++..|++.|. +++++|.+. +.++....++...... ...++.-..+..++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 72 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-------RVGAYDINE--AGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAA 72 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999998875 688888753 3333222222100000 00011000111222
Q ss_pred --cCCCcEEEEeCCCCCCCC---Cc---HHHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEecCchhhHHHHHHHHCCC
Q 022227 79 --CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNALILKEFAPS 147 (300)
Q Consensus 79 --~~~aDvVi~~ag~~~~~g---~~---r~dl~~~N~~i~~~i~~~i~~~---~~~~~~viv~sNP~~~~~~~~~~~~~~ 147 (300)
....|+||++||...... .+ -...+..|+.....+.+.+.++ .+ ..++++++..... .+
T Consensus 73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~---------~~ 142 (260)
T PRK08267 73 ATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAI---------YG 142 (260)
T ss_pred HcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhC---------cC
Confidence 235699999998754221 11 2345677877666665555322 22 2456776654321 11
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEE
Q 022227 148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~ 183 (300)
.+....++.++.-...+...++.++. +..++...
T Consensus 143 ~~~~~~Y~~sKaa~~~~~~~l~~~~~--~~~i~v~~ 176 (260)
T PRK08267 143 QPGLAVYSATKFAVRGLTEALDLEWR--RHGIRVAD 176 (260)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhc--ccCcEEEE
Confidence 12111244444444455556665543 33455443
No 204
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.80 E-value=9.7e-05 Score=68.51 Aligned_cols=171 Identities=18% Similarity=0.125 Sum_probs=90.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhh-hhhhhhhhhhhccC---Cc-ccEEE-eCC------
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA-LNGVKMELVDAAFP---LL-KGVVA-TTD------ 74 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~-l~g~~~dl~~~~~~---~~-~~v~~-~~~------ 74 (300)
+|.||||+|++|++++..|+..+.. .+|+++.+..+.+. .+.....+...... .. .++.. ..|
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-----~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-----AKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-----CEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 5899999999999999999987521 15777776542211 11010011100000 00 11111 111
Q ss_pred ------hhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH----HHHH
Q 022227 75 ------AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEF 144 (300)
Q Consensus 75 ------~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~----~~~~ 144 (300)
..+..+++|+|||+|+.... ..+..++...|+....++++.+.+...+ .++++|.-. +.... ....
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~--~~v~iSS~~-v~~~~~~~~~~~~ 151 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGRAK--PLHYVSTIS-VLAAIDLSTVTED 151 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCCCc--eEEEEcccc-ccCCcCCCCcccc
Confidence 23445789999999986532 2234556778999999999988876532 355555322 11100 0000
Q ss_pred CCCCC----CCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecC
Q 022227 145 APSIP----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (300)
Q Consensus 145 ~~~~p----~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~ 187 (300)
.+..+ ...-++.++...+++....++. |++..-++.-.|.|.
T Consensus 152 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 152 DAIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGN 197 (367)
T ss_pred ccccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeec
Confidence 00000 0112445566555555544443 777777766666775
No 205
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00047 Score=60.73 Aligned_cols=149 Identities=15% Similarity=0.113 Sum_probs=83.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC----C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT----G 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~----~ 81 (300)
.++.||||+|.+|..++..|+..|. +++++|+++ ++++.......+.. ....++.-..+..++++ .
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 71 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-------QVIACGRNQ--SVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLPFI 71 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcccC
Confidence 5799999999999999999998775 788998863 33332211100000 00011111112222222 2
Q ss_pred CcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEe
Q 022227 82 VNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC 155 (300)
Q Consensus 82 aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~ 155 (300)
.|.+|+.||..... ..+. .+.+..|......+.+.+..+-.+..+++++++.... .+.|....++
T Consensus 72 ~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~---------~~~~~~~~Y~ 142 (240)
T PRK06101 72 PELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE---------LALPRAEAYG 142 (240)
T ss_pred CCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc---------cCCCCCchhh
Confidence 47888888753211 1222 2457788888888888777642223456666653321 1233333566
Q ss_pred eehhhHHHHHHHHHHHcC
Q 022227 156 LTRLDHNRALGQISEKLN 173 (300)
Q Consensus 156 ~t~ld~~R~~~~la~~l~ 173 (300)
.++.-...+.+.++.++.
T Consensus 143 asK~a~~~~~~~l~~e~~ 160 (240)
T PRK06101 143 ASKAAVAYFARTLQLDLR 160 (240)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677666677777775553
No 206
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.79 E-value=0.00032 Score=62.25 Aligned_cols=153 Identities=14% Similarity=0.124 Sum_probs=81.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCcccEEEeCCh-------
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDA------- 75 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~~~v~~~~~~------- 75 (300)
+.+++.|+||+|.+|..++..|++.|. ++++.+... ++.++ ++.+... ....++.-..+.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~----~l~~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-------KVAVLYNSA-ENEAK----ELREKGVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCc-HHHHH----HHHhCCCeEEEecCCCHHHHHHHHHHH
Confidence 457899999999999999999998874 576765432 12221 1111000 000000000011
Q ss_pred hhhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHC
Q 022227 76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
.+.+...|++|++||..... ..+. ...+..|+.. ++.+.+.+++.. ...+|++|..... .
T Consensus 74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~~~--------~ 143 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK--NGAIVNIASNAGI--------G 143 (255)
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcCHHhC--------C
Confidence 12234679999999875321 1222 2345566655 566666665443 2456776653211 0
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
+..+....++.++.-...+.+.++.++. +.+|+
T Consensus 144 ~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~~i~ 176 (255)
T PRK06463 144 TAAEGTTFYAITKAGIIILTRRLAFELG--KYGIR 176 (255)
T ss_pred CCCCCccHhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1112122456666666667777777654 34455
No 207
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.79 E-value=0.00031 Score=62.23 Aligned_cols=153 Identities=14% Similarity=0.134 Sum_probs=79.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh--
Q 022227 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV-- 76 (300)
Q Consensus 2 ~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~-- 76 (300)
+...+++.||||+|.+|.+++..|+..|. ++++.|.++ ++++....++.+.... ...++.-..+..
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~-------~vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~ 76 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGA-------EIIINDITA--ERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAA 76 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHH
Confidence 34557899999999999999999998774 788998863 3443333333321100 000110000111
Q ss_pred -----hhcCCCcEEEEeCCCCCC-C--CCcH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHHHH
Q 022227 77 -----EACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 77 -----~a~~~aDvVi~~ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~~~ 143 (300)
+.+...|+||+++|.... + ..+. ...+..|......+.+.+.++. .+..++|++|+-.. .
T Consensus 77 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-------~ 149 (254)
T PRK08085 77 IEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS-------E 149 (254)
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh-------c
Confidence 122457999999986421 1 1122 2346667665555555544432 11246777665321 1
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.+....++.++.-...+.+.+++++
T Consensus 150 --~~~~~~~~Y~~sK~a~~~~~~~la~e~ 176 (254)
T PRK08085 150 --LGRDTITPYAASKGAVKMLTRGMCVEL 176 (254)
T ss_pred --cCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 122222234445444445555566554
No 208
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00036 Score=61.90 Aligned_cols=153 Identities=14% Similarity=0.067 Sum_probs=79.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh
Q 022227 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA 78 (300)
Q Consensus 2 ~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a 78 (300)
+++.+++.||||+|.+|..++..|++.|. .+++++.++ +++ ....++...... ...++.-..+....
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~-------~v~~~~r~~--~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGA-------IPVIFGRSA--PDD-EFAEELRALQPRAEFVQVDLTDDAQCRDA 73 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCC-------cEEEEcCCh--hhH-HHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 45567999999999999999999998875 577787754 222 122222211100 00111111112222
Q ss_pred c-------CCCcEEEEeCCCCCCCCC-----cHHHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEecCchhhHHHHHHHHC
Q 022227 79 C-------TGVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 79 ~-------~~aDvVi~~ag~~~~~g~-----~r~dl~~~N~~i~~~i~~~i~~~~~-~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
+ ...|+||++||....... +-.+.+..|+.....+.+.+.++-. +...++++|.-...
T Consensus 74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~--------- 144 (258)
T PRK08628 74 VEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL--------- 144 (258)
T ss_pred HHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc---------
Confidence 2 357999999986432211 1133466777666666655543221 12245555542221
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+...-++.++.-...+.+.+++++.
T Consensus 145 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~ 172 (258)
T PRK08628 145 TGQGGTSGYAAAKGAQLALTREWAVALA 172 (258)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 1112122345555544556666666553
No 209
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.0002 Score=63.56 Aligned_cols=150 Identities=20% Similarity=0.264 Sum_probs=78.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCcccEEEeCCh-------
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDA------- 75 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~~~v~~~~~~------- 75 (300)
+.+++.|+||+|++|++++..|++.|. ++++++.++ +.++....++.+... ....++.-..+.
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA-------RVHVCDVSE--AALAATAARLPGAKVTATVADVADPAQVERVFDTA 80 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHH
Confidence 557999999999999999999998875 688888753 222211111111100 000000000011
Q ss_pred hhhcCCCcEEEEeCCCCCCCC----CcH---HHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 76 VEACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~g----~~r---~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
.+.+.++|+||+.+|.....+ .+. .+.+..|......+.+.+ .+... ..++++.|.-...
T Consensus 81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~vv~~ss~~~~-------- 151 (264)
T PRK12829 81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH-GGVIIALSSVAGR-------- 151 (264)
T ss_pred HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CeEEEEecccccc--------
Confidence 122357899999998752221 122 234556666666555554 33222 1245554432210
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.++|....++.++-....+...+++++
T Consensus 152 -~~~~~~~~y~~~K~a~~~~~~~l~~~~ 178 (264)
T PRK12829 152 -LGYPGRTPYAASKWAVVGLVKSLAIEL 178 (264)
T ss_pred -cCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 233333335555555555666666665
No 210
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00027 Score=62.56 Aligned_cols=151 Identities=17% Similarity=0.179 Sum_probs=79.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCcccEEEeCCh-------
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDA------- 75 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~~~v~~~~~~------- 75 (300)
+.++|.|+||+|.+|++++..|++.|. ++++.++++. . .....++..... ....++.-..+.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-------~Vi~~~r~~~--~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-------RVALLDRSED--V-AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCHH--H-HHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence 456899999999999999999998875 6888887532 1 111111111000 000011000011
Q ss_pred hhhcCCCcEEEEeCCCCCCCC---CcH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHHHHHHHCCC
Q 022227 76 VEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAPS 147 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~g---~~r---~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~~~~~~~~~ 147 (300)
.+.+...|++|+++|...... .+. ...+..|+.....+.+.+.++-. ...++|++|.-... .+
T Consensus 84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~ 154 (255)
T PRK06841 84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV---------VA 154 (255)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc---------cC
Confidence 112346799999998753211 111 23466777766666666554310 12356666643211 12
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.|..--++.++.....+.+.+|+++.
T Consensus 155 ~~~~~~Y~~sK~a~~~~~~~la~e~~ 180 (255)
T PRK06841 155 LERHVAYCASKAGVVGMTKVLALEWG 180 (255)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 23222344555544555666666653
No 211
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00026 Score=62.98 Aligned_cols=148 Identities=18% Similarity=0.195 Sum_probs=80.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-cc-CCcccEEEeCChhhhc----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-PLLKGVVATTDAVEAC---- 79 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-~~-~~~~~v~~~~~~~~a~---- 79 (300)
++|.||||+|.+|..++..|++.|. +++++|.+. ++++....++... .. ....+++-..+..+++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 73 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGA-------TLGLVARRT--DALQAFAARLPKAARVSVYAADVRDADALAAAAADFI 73 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHH
Confidence 5899999999999999999998875 788998863 3443322222111 00 0001111111122222
Q ss_pred ---CCCcEEEEeCCCCCCCC----Cc---HHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEecCchhhHHHHHHHHC
Q 022227 80 ---TGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 80 ---~~aDvVi~~ag~~~~~g----~~---r~dl~~~N~~i~~~i----~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
...|++|+.||...... .+ -...+..|+.....+ .+.+.+... ..+|++++-...
T Consensus 74 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~--~~iv~isS~~~~--------- 142 (257)
T PRK07024 74 AAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARR--GTLVGIASVAGV--------- 142 (257)
T ss_pred HhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCC--CEEEEEechhhc---------
Confidence 23699999998743211 12 123455666555554 445555532 356666643321
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|..-.++.++.-...+...++.++.
T Consensus 143 ~~~~~~~~Y~asK~a~~~~~~~l~~e~~ 170 (257)
T PRK07024 143 RGLPGAGAYSASKAAAIKYLESLRVELR 170 (257)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence 1233333466666666666666666553
No 212
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00075 Score=61.64 Aligned_cols=151 Identities=16% Similarity=0.137 Sum_probs=79.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh---
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE--- 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~--- 77 (300)
+.++|.|+||+|.+|..++..|+..|. +|++++++. ++++....++...... ...++.-..+..+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-------~Vi~~~R~~--~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~ 109 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-------TVVAVARRE--DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVA 109 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 346899999999999999999998775 789999863 4444332222211000 0001100011112
Q ss_pred ----hcCCCcEEEEeCCCCCCCC--C---cH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 78 ----ACTGVNIAVMVGGFPRKEG--M---ER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 78 ----a~~~aDvVi~~ag~~~~~g--~---~r---~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
.+...|++|++||...... + +. ...+..|.-. .+.+.+.+.+... ..+|++|+ ...
T Consensus 110 ~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--g~iv~isS-~~~----- 181 (293)
T PRK05866 110 DVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGD--GHIINVAT-WGV----- 181 (293)
T ss_pred HHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cEEEEECC-hhh-----
Confidence 2347899999998753211 1 11 2345556544 4444455555432 35666664 211
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.....|....++.++.-...+.+.++.++.
T Consensus 182 --~~~~~p~~~~Y~asKaal~~l~~~la~e~~ 211 (293)
T PRK05866 182 --LSEASPLFSVYNASKAALSAVSRVIETEWG 211 (293)
T ss_pred --cCCCCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence 101123222455555555566666666664
No 213
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.78 E-value=0.00011 Score=55.51 Aligned_cols=67 Identities=22% Similarity=0.298 Sum_probs=44.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEE-ecCCchhhhhhhhhhhhhhccCCcccEEEeC-ChhhhcCCCcE
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~-D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~-~~~~a~~~aDv 84 (300)
||+||| +|.+|++++..|+..+. . +.++.++ +.+ .++++..+.++. +.... +..++++.+|+
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~-~---~~~v~~~~~r~--~~~~~~~~~~~~---------~~~~~~~~~~~~~~adv 64 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGI-K---PHEVIIVSSRS--PEKAAELAKEYG---------VQATADDNEEAAQEADV 64 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESS--HHHHHHHHHHCT---------TEEESEEHHHHHHHTSE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC-C---ceeEEeeccCc--HHHHHHHHHhhc---------cccccCChHHhhccCCE
Confidence 799999 79999999999998874 1 2267755 775 344433222221 11222 57888999999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
||++.
T Consensus 65 vilav 69 (96)
T PF03807_consen 65 VILAV 69 (96)
T ss_dssp EEE-S
T ss_pred EEEEE
Confidence 99984
No 214
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.78 E-value=0.00048 Score=61.23 Aligned_cols=122 Identities=18% Similarity=0.152 Sum_probs=69.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh---
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV--- 76 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~--- 76 (300)
.+.+++.|+||+|++|++++..|+..|. ++++++.+. ++++....++...... ...++.-..+..
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~ 80 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGA-------RVVLSARKA--EELEEAAAHLEALGIDALWIAADVADEADIERLA 80 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 3457899999999999999999998764 688888753 3333222222211000 000110000111
Q ss_pred ----hhcCCCcEEEEeCCCCCCCC---C---cHHHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEecCc
Q 022227 77 ----EACTGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANP 133 (300)
Q Consensus 77 ----~a~~~aDvVi~~ag~~~~~g---~---~r~dl~~~N~~i~~~i~~~i~~~---~~~~~~viv~sNP 133 (300)
+.+...|.||++||...... . .-.+.++.|+.....+.+.+.++ ..+..+++++|+.
T Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~ 150 (259)
T PRK08213 81 EETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASV 150 (259)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECCh
Confidence 11246799999998643211 1 11345678888888888876554 1112356666653
No 215
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.77 E-value=0.00098 Score=63.49 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=49.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC--------CcccEEEeCChhh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--------LLKGVVATTDAVE 77 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~--------~~~~v~~~~~~~~ 77 (300)
|||+|+| +|.||..++..++. |. +++.+|+++ ++++...........+ ...+++.+++..+
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA~-G~-------~VigvD~d~--~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~ 69 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIAQ-NH-------EVVALDILP--SRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNE 69 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-CC-------cEEEEECCH--HHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhh
Confidence 4899999 89999999976664 53 799999974 4443221111000000 1234555666778
Q ss_pred hcCCCcEEEEeCCCC
Q 022227 78 ACTGVNIAVMVGGFP 92 (300)
Q Consensus 78 a~~~aDvVi~~ag~~ 92 (300)
+.++||+||++...|
T Consensus 70 ~~~~ad~vii~Vpt~ 84 (388)
T PRK15057 70 AYRDADYVIIATPTD 84 (388)
T ss_pred hhcCCCEEEEeCCCC
Confidence 889999999986554
No 216
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00033 Score=63.34 Aligned_cols=150 Identities=14% Similarity=0.097 Sum_probs=79.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh---
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE--- 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~--- 77 (300)
+.+.+.||||+|.+|++++..|+..|. ++++.|.++ +.++....++...... ...++.-..+..+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-------~Vv~~~r~~--~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 75 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-------RVVLGDVDK--PGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLAD 75 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 456799999999999999999998875 788898763 3444333333211100 0011111111111
Q ss_pred ----hcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecCchhhHHHHHHH
Q 022227 78 ----ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 78 ----a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
.+...|++|+.||..... ..+. ...+..|+.....+.+.+ .+.+. ...+|++|+-...
T Consensus 76 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~-~g~iv~isS~~~~------- 147 (275)
T PRK05876 76 EAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT-GGHVVFTASFAGL------- 147 (275)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-CCEEEEeCChhhc-------
Confidence 223579999999874311 1222 234566766555555444 34432 2356666653221
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.|..-.++.++.-...+...++.++
T Consensus 148 --~~~~~~~~Y~asK~a~~~~~~~l~~e~ 174 (275)
T PRK05876 148 --VPNAGLGAYGVAKYGVVGLAETLAREV 174 (275)
T ss_pred --cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 122322234555554444555555555
No 217
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.76 E-value=8.5e-05 Score=68.59 Aligned_cols=120 Identities=13% Similarity=0.036 Sum_probs=65.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhhc-
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a~- 79 (300)
+.++|+||||+|+||.+++..|+..|. +|++.+++. ++++....++...... ...++.-..+..+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-------HVIMACRNL--KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVD 75 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHH
Confidence 567899999999999999999998874 788888753 3443222222110000 000110001111222
Q ss_pred ------CCCcEEEEeCCCCCC----CCCcH---HHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecC
Q 022227 80 ------TGVNIAVMVGGFPRK----EGMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 80 ------~~aDvVi~~ag~~~~----~g~~r---~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sN 132 (300)
...|++|+.||.... ...+. ...+..|......+. +.+++...+..++|++|+
T Consensus 76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS 145 (322)
T PRK07453 76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGT 145 (322)
T ss_pred HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcc
Confidence 248999999986321 12222 334667766554444 444443221236777664
No 218
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.76 E-value=0.00017 Score=69.01 Aligned_cols=103 Identities=17% Similarity=0.118 Sum_probs=61.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeCChhhhc
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC 79 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~~~~~a~ 79 (300)
.+.++|+||||+|.+|.+++..|++.|. ++++++.++ +++... +.+..... ..++.-..+..+.+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~-------~Vi~l~r~~--~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~l 243 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA-------KVVALTSNS--DKITLE---INGEDLPVKTLHWQVGQEAALAELL 243 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH---HhhcCCCeEEEEeeCCCHHHHHHHh
Confidence 4567899999999999999999998774 688888753 233211 11100000 00111011233456
Q ss_pred CCCcEEEEeCCCCCCCCCcH---HHHHHhhHHHHHHHHHHH
Q 022227 80 TGVNIAVMVGGFPRKEGMER---KDVMSKNVSIYKAQASAL 117 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~g~~r---~dl~~~N~~i~~~i~~~i 117 (300)
.+.|++|+.||.......+. .+.++.|......+.+.+
T Consensus 244 ~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~ 284 (406)
T PRK07424 244 EKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELF 284 (406)
T ss_pred CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999998754333332 345667776655555554
No 219
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.76 E-value=0.0016 Score=57.35 Aligned_cols=155 Identities=17% Similarity=0.183 Sum_probs=82.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCc----ccEEEeC------
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATT------ 73 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~----~~v~~~~------ 73 (300)
+.++|.|+||+|++|.+++..|++.|. +++++|++. +.++....++.+...... .++....
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 81 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGA-------TVILLGRTE--EKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQ 81 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------cEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHH
Confidence 356899999999999999999998774 688999863 334333334433211100 0110000
Q ss_pred ---ChhhhcCCCcEEEEeCCCCCC--C--CCcH---HHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecCchhhHHH
Q 022227 74 ---DAVEACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNAL 139 (300)
Q Consensus 74 ---~~~~a~~~aDvVi~~ag~~~~--~--g~~r---~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sNP~~~~~~ 139 (300)
...+.+...|+||+.||.... + ..+. ...+..|+.....+.+.+ .+.. ...++++|+....
T Consensus 82 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~--- 156 (247)
T PRK08945 82 LADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP--AASLVFTSSSVGR--- 156 (247)
T ss_pred HHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC--CCEEEEEccHhhc---
Confidence 112233468999999986421 1 2222 334667776655555444 3332 2356666653321
Q ss_pred HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 140 ~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.+....++.++.-...+...+++.+. ...++
T Consensus 157 ------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~ 189 (247)
T PRK08945 157 ------QGRANWGAYAVSKFATEGMMQVLADEYQ--GTNLR 189 (247)
T ss_pred ------CCCCCCcccHHHHHHHHHHHHHHHHHhc--ccCEE
Confidence 1222222355555444455555666553 23454
No 220
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00061 Score=60.53 Aligned_cols=153 Identities=11% Similarity=0.058 Sum_probs=80.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC--chhhhhhhhhhhhhhccC---CcccEEEeCChhhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFP---LLKGVVATTDAVEA 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~--~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a 78 (300)
+.+++.|+||+|.+|.+++..|+..|. ++++++... +.+.++....++...... ...++.-..+..+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-------~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 79 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-------KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKL 79 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-------cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHH
Confidence 446899999999999999999998774 555554321 122222222222211000 00111111111111
Q ss_pred -------cCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEe-cCchhhHHHHHHHH
Q 022227 79 -------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILKEF 144 (300)
Q Consensus 79 -------~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~-sNP~~~~~~~~~~~ 144 (300)
+...|++|+.||..... ..+ -...+..|+.....+.+.+.+.-.+...++++ +..+..
T Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------- 151 (257)
T PRK12744 80 FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------- 151 (257)
T ss_pred HHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc--------
Confidence 34689999999874321 112 23456677766666666555432112234444 332221
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
..|....++.++.-...+.+.++++++
T Consensus 152 --~~~~~~~Y~~sK~a~~~~~~~la~e~~ 178 (257)
T PRK12744 152 --FTPFYSAYAGSKAPVEHFTRAASKEFG 178 (257)
T ss_pred --cCCCcccchhhHHHHHHHHHHHHHHhC
Confidence 012223467777777788888888876
No 221
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.0017 Score=56.90 Aligned_cols=151 Identities=19% Similarity=0.194 Sum_probs=79.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC--chhhhhhhhhhhhhhccC---CcccEEEeCChhhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFP---LLKGVVATTDAVEA 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~--~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a 78 (300)
+.++|.|+||+|++|++++..|++.|. ++++++... +.+.++....++...... ...++.-..+..+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA-------DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 567999999999999999999998775 678876531 122222111122111000 00000000011122
Q ss_pred -------cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHh-----hhcCCCeEEEEecCchhhHHHH
Q 022227 79 -------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE-----QHAAPNCKVLVVANPANTNALI 140 (300)
Q Consensus 79 -------~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~-----~~~~~~~~viv~sNP~~~~~~~ 140 (300)
....|+||+++|..... ..+. ...+..|......+++.+. +.. ..++++++.....
T Consensus 78 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~iv~~sS~~~~---- 151 (249)
T PRK12827 78 LDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR--GGRIVNIASVAGV---- 151 (249)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC--CeEEEEECCchhc----
Confidence 24689999999875421 1122 2346778888888887776 222 2356666654321
Q ss_pred HHHHCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 141 ~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.+...-++.++.-...+.+.+++.+
T Consensus 152 -----~~~~~~~~y~~sK~a~~~~~~~l~~~~ 178 (249)
T PRK12827 152 -----RGNRGQVNYAASKAGLIGLTKTLANEL 178 (249)
T ss_pred -----CCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 112222234555444444455566554
No 222
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.74 E-value=0.00039 Score=65.08 Aligned_cols=115 Identities=21% Similarity=0.236 Sum_probs=70.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-----ccCCcccEEEeCChhh
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-----AFPLLKGVVATTDAVE 77 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-----~~~~~~~v~~~~~~~~ 77 (300)
+.++||+|+| +|.+|+.++..|...+ .++++..++ +..+....+-... ...+..++..+++..+
T Consensus 5 ~~~mkI~IiG-aGa~G~alA~~La~~g--------~v~l~~~~~--~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~ 73 (341)
T PRK12439 5 KREPKVVVLG-GGSWGTTVASICARRG--------PTLQWVRSA--ETADDINDNHRNSRYLGNDVVLSDTLRATTDFAE 73 (341)
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHCC--------CEEEEeCCH--HHHHHHHhcCCCcccCCCCcccCCCeEEECCHHH
Confidence 3568999999 7999999999998764 255666542 3222111110000 1112235667788888
Q ss_pred hcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh-----HHHHHHHH
Q 022227 78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-----NALILKEF 144 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~-----~~~~~~~~ 144 (300)
+++++|+||++. | ...++++++.+..+-+++..+|.++|-.+. +..++.+.
T Consensus 74 a~~~aDlVilav--p--------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~ 129 (341)
T PRK12439 74 AANCADVVVMGV--P--------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEV 129 (341)
T ss_pred HHhcCCEEEEEe--C--------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHH
Confidence 899999999973 1 234556666666554445567888886652 34455554
No 223
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=97.74 E-value=0.00017 Score=65.33 Aligned_cols=94 Identities=10% Similarity=0.133 Sum_probs=57.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhh---hhhhhhhhhhccCCcccEEEeCChhhhc----
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL---NGVKMELVDAAFPLLKGVVATTDAVEAC---- 79 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l---~g~~~dl~~~~~~~~~~v~~~~~~~~a~---- 79 (300)
||+|+||+|++|++++..|++.|. +++.+.++++.... +....|+.|.. .+.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~~d~~d~~-----------~l~~a~~~~~ 62 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-------PFLVASRSSSSSAGPNEKHVKFDWLDED-----------TWDNPFSSDD 62 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-------cEEEEeCCCccccCCCCccccccCCCHH-----------HHHHHHhccc
Confidence 589999999999999999998764 67777775421111 11222333322 344555
Q ss_pred --CC-CcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEec
Q 022227 80 --TG-VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (300)
Q Consensus 80 --~~-aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~s 131 (300)
++ +|.|+++++... +. ....+++++++++.+-+ ++|..|
T Consensus 63 ~~~g~~d~v~~~~~~~~----~~-------~~~~~~~i~aa~~~gv~--~~V~~S 104 (285)
T TIGR03649 63 GMEPEISAVYLVAPPIP----DL-------APPMIKFIDFARSKGVR--RFVLLS 104 (285)
T ss_pred CcCCceeEEEEeCCCCC----Ch-------hHHHHHHHHHHHHcCCC--EEEEee
Confidence 67 999999875321 11 13345677777776532 455554
No 224
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00017 Score=62.90 Aligned_cols=121 Identities=13% Similarity=0.083 Sum_probs=65.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChh-----
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAV----- 76 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~----- 76 (300)
.+.++|+|+||+|.+|++++..|++.|. ++++++.++ ++......++....... ..++.-..+..
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA-------RVALIGRGA--APLSQTLPGVPADALRIGGIDLVDPQAARRAVDE 75 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC-------eEEEEeCCh--HhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHH
Confidence 3457999999999999999999998875 689998854 22221111221111000 00110001111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEecCc
Q 022227 77 --EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANP 133 (300)
Q Consensus 77 --~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~---~~~~~~viv~sNP 133 (300)
+.+...|+||+.+|..... ..+. .+.+..|......+.+.+.+. .+ ..+++++|.-
T Consensus 76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~ 142 (239)
T PRK12828 76 VNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAG 142 (239)
T ss_pred HHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECch
Confidence 2234689999998864211 1122 234556766666666655432 12 2356666653
No 225
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00054 Score=62.46 Aligned_cols=122 Identities=16% Similarity=0.170 Sum_probs=69.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (300)
+.+++.|+||+|.+|++++..|++.|. ++++++.++. +.++.....+...... ...++.-..+..+.
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~-------~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 116 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA-------DIAIVYLDEH-EDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVE 116 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 346899999999999999999998775 7888887632 1222222222111000 00011001111122
Q ss_pred -----cCCCcEEEEeCCCCCC--C--CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCc
Q 022227 79 -----CTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~--~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
+...|+||+.||.... + ..+. ...+..|+.....+.+.+.+.-.+...+|++|+-
T Consensus 117 ~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~ 183 (290)
T PRK06701 117 ETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI 183 (290)
T ss_pred HHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 2357999999986421 1 1122 3457788888888888776642123356666653
No 226
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00025 Score=63.11 Aligned_cols=153 Identities=16% Similarity=0.116 Sum_probs=77.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (300)
..+++.|+||+|++|.+++..|++.|. .+++.+... .+.++....++...... ...++.-..+..++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 79 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-------DVAVHYNRS-RDEAEALAAEIRALGRRAVALQADLADEAEVRALVA 79 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 346899999999999999999998774 566665532 22232222222111100 00011101111222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhcCC--CeEEEEecCchhhHHHHHHHHC
Q 022227 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAP--NCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~~--~~~viv~sNP~~~~~~~~~~~~ 145 (300)
+...|+||++||..... ..+. ...+..|+.....+.+.+.++.++ ...+++++.... .
T Consensus 80 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~--------~- 150 (258)
T PRK09134 80 RASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV--------W- 150 (258)
T ss_pred HHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh--------c-
Confidence 23479999999864321 1122 345677877666666665543221 234554442110 0
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|....|+.++.-...+.+.++++++
T Consensus 151 ~~~p~~~~Y~~sK~a~~~~~~~la~~~~ 178 (258)
T PRK09134 151 NLNPDFLSYTLSKAALWTATRTLAQALA 178 (258)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 1112112345555555566666777664
No 227
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.73 E-value=0.0016 Score=57.69 Aligned_cols=148 Identities=11% Similarity=0.118 Sum_probs=77.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-C----CcccEEEeCChhhh--
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P----LLKGVVATTDAVEA-- 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~----~~~~v~~~~~~~~a-- 78 (300)
++|.|+||+|++|++++..|++.|. +++++|.+. +.++....++..... . ...+++-..+...+
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 73 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY-------RVAVADINS--EKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSR 73 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHH
Confidence 4799999999999999999998875 789999753 333322222221100 0 00011100011111
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHHHHHHH
Q 022227 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
+...|+||++||..... ..+. ...+..|+... +.+.+.+.+... ..++|.+|+....
T Consensus 74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~~ss~~~~------- 145 (259)
T PRK12384 74 GVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI-QGRIIQINSKSGK------- 145 (259)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC-CcEEEEecCcccc-------
Confidence 24579999999875422 1222 23355666553 444454444432 2367777664321
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
+ +.+...-++.++.....+.+.+++++
T Consensus 146 ~--~~~~~~~Y~~sKaa~~~l~~~la~e~ 172 (259)
T PRK12384 146 V--GSKHNSGYSAAKFGGVGLTQSLALDL 172 (259)
T ss_pred c--CCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 1 11212234555554445555566554
No 228
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.73 E-value=0.00052 Score=61.35 Aligned_cols=151 Identities=13% Similarity=0.140 Sum_probs=81.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh----
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA---- 75 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~---- 75 (300)
++.+++.|+||+|.+|.+++..|+..|. ++++.+.++ ++++....++...... ...++.-..+.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~-------~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA-------TIVFNDINQ--ELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMV 78 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 3456899999999999999999998775 688888753 3443332233221100 00111000011
Q ss_pred ---hhhcCCCcEEEEeCCCCCC-C--CCcH---HHHHHhhHHHHH----HHHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 76 ---VEACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYK----AQASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 76 ---~~a~~~aDvVi~~ag~~~~-~--g~~r---~dl~~~N~~i~~----~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
.+.+...|++|++||.... + ..+. ...+..|..... .+.+.+.+.. ..++|++++....
T Consensus 79 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~~------ 150 (265)
T PRK07097 79 SQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG--HGKIINICSMMSE------ 150 (265)
T ss_pred HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC--CcEEEEEcCcccc------
Confidence 1223457999999987431 1 1111 233455655444 3444444432 3467777764421
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+....++.++.-...+.+.+++.++
T Consensus 151 ---~~~~~~~~Y~~sKaal~~l~~~la~e~~ 178 (265)
T PRK07097 151 ---LGRETVSAYAAAKGGLKMLTKNIASEYG 178 (265)
T ss_pred ---CCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 1222223456666655667777777764
No 229
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.0014 Score=57.63 Aligned_cols=149 Identities=13% Similarity=0.060 Sum_probs=79.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC----cccEEEeCChhhhc--
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----LKGVVATTDAVEAC-- 79 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~----~~~v~~~~~~~~a~-- 79 (300)
++|.|+||+|++|..++..|++.|. +|+++|+++ ++++....++....... ..++.-..+..+.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 72 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-------RLYLAARDV--ERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS 72 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence 5899999999999999999998875 688888864 33333222332111000 01111111122222
Q ss_pred --CCCcEEEEeCCCCCC---CCCcH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHHHHHHHCCCCC
Q 022227 80 --TGVNIAVMVGGFPRK---EGMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAPSIP 149 (300)
Q Consensus 80 --~~aDvVi~~ag~~~~---~g~~r---~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~~~~~~~~~~p 149 (300)
+..|++|+.+|.... ...+. .+.+..|+.....+.+.+.++-. +...++++|..... .+.|
T Consensus 73 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~ 143 (243)
T PRK07102 73 LPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD---------RGRA 143 (243)
T ss_pred HhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc---------CCCC
Confidence 245999999886421 12222 24566777766666665544311 12356666653321 1222
Q ss_pred CCcEEeeehhhHHHHHHHHHHHc
Q 022227 150 AKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l 172 (300)
..-.++.++.-...+...++.++
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~el 166 (243)
T PRK07102 144 SNYVYGSAKAALTAFLSGLRNRL 166 (243)
T ss_pred CCcccHHHHHHHHHHHHHHHHHh
Confidence 22235555554445555565554
No 230
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.72 E-value=0.0005 Score=60.79 Aligned_cols=150 Identities=18% Similarity=0.206 Sum_probs=77.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh-------
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA------- 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~------- 75 (300)
++|.|+||+|++|++++..|++.|. +++++|.... +.+.....++...... ...+++-..+.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-------~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-------DLAINDRPDD-EELAATQQELRALGVEVIFFPADVADLSAHEAMLDAA 74 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecCch-hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4799999999999999999998874 7888886531 2222111122111100 00111101111
Q ss_pred hhhcCCCcEEEEeCCCCCC---C--CCcH---HHHHHhhHHHHHHHHHHHhhh----cC-C---CeEEEEecCchhhHHH
Q 022227 76 VEACTGVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKAQASALEQH----AA-P---NCKVLVVANPANTNAL 139 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~---~--g~~r---~dl~~~N~~i~~~i~~~i~~~----~~-~---~~~viv~sNP~~~~~~ 139 (300)
.+.+...|+||++||.... + ..+. .+.+..|+.....+.+.+.++ .. . ...++++|+....
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--- 151 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI--- 151 (256)
T ss_pred HHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc---
Confidence 1112468999999987431 1 1122 234667776666665554332 21 0 1235665543321
Q ss_pred HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 140 ~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.+....++.++.-...+...+++++
T Consensus 152 ------~~~~~~~~Y~~sK~a~~~~~~~l~~~~ 178 (256)
T PRK12745 152 ------MVSPNRGEYCISKAGLSMAAQLFAARL 178 (256)
T ss_pred ------cCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 122323345666665566666677654
No 231
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00025 Score=63.00 Aligned_cols=152 Identities=18% Similarity=0.170 Sum_probs=82.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhh---hhhhhhhhhhhccCCcccEEEeCChhhhcCC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA---LNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~---l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (300)
.++|.|+||+|.||+.++..|+..|. ++++++.++.... ......|+.+.... ..+ .....+.+..
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~--~~~--~~~~~~~~~~ 77 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGA-------RVVTTARSRPDDLPEGVEFVAADLTTAEGC--AAV--ARAVLERLGG 77 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCC-------EEEEEeCChhhhcCCceeEEecCCCCHHHH--HHH--HHHHHHHcCC
Confidence 47899999999999999999998775 6888887542110 11112233222100 000 0012233567
Q ss_pred CcEEEEeCCCCCCC-----CCcH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCC
Q 022227 82 VNIAVMVGGFPRKE-----GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP 149 (300)
Q Consensus 82 aDvVi~~ag~~~~~-----g~~r---~dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p 149 (300)
.|+||+.||..... ..+. .+.+..|+... +.+.+.+.+... .++|++|+.... ...+
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~ii~isS~~~~---------~~~~ 146 (260)
T PRK06523 78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGS--GVIIHVTSIQRR---------LPLP 146 (260)
T ss_pred CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--cEEEEEeccccc---------CCCC
Confidence 89999999864211 1121 23455665544 444555555432 357777764321 1122
Q ss_pred -CCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 150 -AKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 150 -~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
....++.++.-...+.+.++++++ +..|+
T Consensus 147 ~~~~~Y~~sK~a~~~l~~~~a~~~~--~~gi~ 176 (260)
T PRK06523 147 ESTTAYAAAKAALSTYSKSLSKEVA--PKGVR 176 (260)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence 122455566555666667777654 34454
No 232
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.72 E-value=0.00078 Score=59.27 Aligned_cols=120 Identities=22% Similarity=0.197 Sum_probs=65.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (300)
+.+++.|+||+|.+|++++..|++.|. ++++.+... .+.++....++.+.... ...++.-.....++
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-------KVVINYNSS-KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVE 76 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEcCCc-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 457899999999999999999998774 565554321 23333222233221100 00011101111222
Q ss_pred -----cCCCcEEEEeCCCCCCCC------CcHHHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEecC
Q 022227 79 -----CTGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVAN 132 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~~g------~~r~dl~~~N~~i~~~i~~~i~~~---~~~~~~viv~sN 132 (300)
+...|+||++||...... +.-.+.+..|+.....+.+.+.++ .. ..+++++|+
T Consensus 77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS 143 (247)
T PRK12935 77 EAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISS 143 (247)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcc
Confidence 234799999998754221 122345677877766666666543 12 235666665
No 233
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=97.71 E-value=5.5e-05 Score=67.43 Aligned_cols=168 Identities=16% Similarity=0.136 Sum_probs=82.1
Q ss_pred EEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhh-hhhhhhhhcc--C----CcccEEE-eCC-------
Q 022227 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-VKMELVDAAF--P----LLKGVVA-TTD------- 74 (300)
Q Consensus 10 IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g-~~~dl~~~~~--~----~~~~v~~-~~~------- 74 (300)
||||+||+|++++..|+..+- + ++|+++-+.++...+.. ....+.+... . ...++++ ..|
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~---~--~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPP---D--VKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS----T--TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCC---C--cEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 799999999999999997642 0 15666655432211111 1011111000 0 0112221 112
Q ss_pred ----hhhhc-CCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH-------
Q 022227 75 ----AVEAC-TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK------- 142 (300)
Q Consensus 75 ----~~~a~-~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~------- 142 (300)
.++.+ +.+|+|||+|+.-.-. .+..++...|+..++++++.+.+... .+++.+|. .-+......
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~~--~~~~~iST-a~v~~~~~~~~~~~~~ 151 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGKR--KRFHYIST-AYVAGSRPGTIEEKVY 151 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEE-GGGTTS-TTT--SSS-
T ss_pred CChHHhhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhccC--cceEEecc-ccccCCCCCccccccc
Confidence 22333 6899999998764322 23445778899999999999986543 26777775 211111100
Q ss_pred -HHCCCC-CCCc---EEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEec
Q 022227 143 -EFAPSI-PAKN---ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (300)
Q Consensus 143 -~~~~~~-p~~~---i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G 186 (300)
...... +... -|..++...+++....+++.|++..-+|--.|.|
T Consensus 152 ~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 152 PEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred ccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 000001 1112 3556889899998888888899988888777666
No 234
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.70 E-value=0.00041 Score=61.16 Aligned_cols=116 Identities=18% Similarity=0.192 Sum_probs=64.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeC-------Ch
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATT-------DA 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~-------~~ 75 (300)
++|.|+||+|++|+.++..|+..|. +++++++++ +..+....++....... ..++.-.. ..
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-------NVVVNDLGE--AGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAA 72 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4799999999999999999998775 788998863 22222221221110000 00110000 12
Q ss_pred hhhcCCCcEEEEeCCCCCC-C--CCc---HHHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecC
Q 022227 76 VEACTGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN 132 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~-~--g~~---r~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sN 132 (300)
.+.+.+.|+||+.+|.... + ..+ -...+..|......+.+.+ ++... .+++++|+
T Consensus 73 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~~~v~~ss 137 (255)
T TIGR01963 73 AAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGW--GRIINIAS 137 (255)
T ss_pred HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--eEEEEEcc
Confidence 2335678999999986421 1 111 1234556776655555555 44432 25666654
No 235
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00032 Score=63.12 Aligned_cols=146 Identities=11% Similarity=0.122 Sum_probs=75.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc--C---CcccEEEeCC------
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--P---LLKGVVATTD------ 74 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~--~---~~~~v~~~~~------ 74 (300)
+++.||||+|++|++++..|+..|. .|++++.++ +.++....++.+... . ...++.-..+
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 74 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY-------LVIATMRNP--EKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQL 74 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHH
Confidence 4799999999999999999998875 688888753 333222211211100 0 0001100001
Q ss_pred hhhhcCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 75 AVEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~----i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
..+.+...|+||++||..... ..+ -.+.+..|......+.+. +++... ..++++|+-...
T Consensus 75 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~vsS~~~~-------- 144 (280)
T PRK06914 75 VLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS--GKIINISSISGR-------- 144 (280)
T ss_pred HHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CEEEEECccccc--------
Confidence 111234579999999875421 111 123456777665555555 444432 345665543221
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHH
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEK 171 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~ 171 (300)
.+.+....++.++.....+...++.+
T Consensus 145 -~~~~~~~~Y~~sK~~~~~~~~~l~~~ 170 (280)
T PRK06914 145 -VGFPGLSPYVSSKYALEGFSESLRLE 170 (280)
T ss_pred -CCCCCCchhHHhHHHHHHHHHHHHHH
Confidence 12232233455555444555555544
No 236
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.70 E-value=0.0005 Score=63.76 Aligned_cols=104 Identities=11% Similarity=0.213 Sum_probs=63.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc----cCCcccEEEeCChhhhc-C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEAC-T 80 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~----~~~~~~v~~~~~~~~a~-~ 80 (300)
|||+|+| +|.+|+.++..|.+.|. +|.|+++++ +.++....+-.+.. .....++..+++..+++ .
T Consensus 1 MkI~IiG-aGa~G~ala~~L~~~g~-------~V~l~~r~~--~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 70 (326)
T PRK14620 1 MKISILG-AGSFGTAIAIALSSKKI-------SVNLWGRNH--TTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSD 70 (326)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEecCH--HHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhC
Confidence 4899999 79999999999998763 788999853 33332211100111 01223566677777776 5
Q ss_pred CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhh-hcCCCeEEEEecCchh
Q 022227 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ-HAAPNCKVLVVANPAN 135 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~~~~~~viv~sNP~~ 135 (300)
++|+||++. + ...+.++++.+.. +-.++..+|..+|=.+
T Consensus 71 ~~Dliiiav-----k-----------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~ 110 (326)
T PRK14620 71 NATCIILAV-----P-----------TQQLRTICQQLQDCHLKKNTPILICSKGIE 110 (326)
T ss_pred CCCEEEEEe-----C-----------HHHHHHHHHHHHHhcCCCCCEEEEEEcCee
Confidence 899999983 1 1233445555554 3233555777787653
No 237
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.70 E-value=0.00021 Score=66.65 Aligned_cols=106 Identities=22% Similarity=0.229 Sum_probs=61.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc----CCcccEEEeCChhhhcCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTDAVEACTG 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~----~~~~~v~~~~~~~~a~~~ 81 (300)
|||+|+| +|.+|+.++..|...|. +|.++|+++..+.+......+.+... ....++..+++. +++++
T Consensus 3 mkI~IiG-~G~mG~~~A~~L~~~G~-------~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 73 (341)
T PRK08229 3 ARICVLG-AGSIGCYLGGRLAAAGA-------DVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALAT 73 (341)
T ss_pred ceEEEEC-CCHHHHHHHHHHHhcCC-------cEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhccC
Confidence 6899999 79999999999998774 68899975311111100000100000 001234445554 67899
Q ss_pred CcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh
Q 022227 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (300)
Q Consensus 82 aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~ 136 (300)
+|+||++...+. ..++++.+....+++..++..+|....
T Consensus 74 ~D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~ 112 (341)
T PRK08229 74 ADLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRN 112 (341)
T ss_pred CCEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCc
Confidence 999999852211 123334454444445667777887653
No 238
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.70 E-value=0.00051 Score=66.01 Aligned_cols=107 Identities=17% Similarity=0.109 Sum_probs=62.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC----------CcccEEEeCC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----------LLKGVVATTD 74 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~----------~~~~v~~~~~ 74 (300)
.+||+|+| .|.+|..++..|+..|. +++.+|+++ ++++.......+...+ ....+..+++
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~-------~V~~~D~~~--~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~ 72 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQK-------QVIGVDINQ--HAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTT 72 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecc
Confidence 47999999 89999999999998874 799999964 4444221100000000 0122333332
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEec
Q 022227 75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~s 131 (300)
.++||+||++...|..+.. ..++..+.+.++.+.++.+++..+|+-|
T Consensus 73 ----~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~S 119 (415)
T PRK11064 73 ----PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILES 119 (415)
T ss_pred ----cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeC
Confidence 4589999999877643221 1123344455555655555555444444
No 239
>PRK07985 oxidoreductase; Provisional
Probab=97.69 E-value=0.00096 Score=60.90 Aligned_cols=151 Identities=16% Similarity=0.127 Sum_probs=82.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeC-------Ch
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-------DA 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~-------~~ 75 (300)
+++.||||+|.+|.+++..|+..|. ++++.+.+.+.+.++.....+...... ...++.-.. ..
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~-------~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA-------DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-------EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 5899999999999999999998875 677877643222222221111111000 000110000 11
Q ss_pred hhhcCCCcEEEEeCCCCCC--C--CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCC
Q 022227 76 VEACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI 148 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~--~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~ 148 (300)
.+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+.++-.++..+|++|+.... .+.
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~---------~~~ 193 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY---------QPS 193 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc---------cCC
Confidence 1234567999999986421 1 1222 3346778877766666665542223467777754321 122
Q ss_pred CCCcEEeeehhhHHHHHHHHHHHc
Q 022227 149 PAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 149 p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
|....|+.++.-...+.+.+++++
T Consensus 194 ~~~~~Y~asKaal~~l~~~la~el 217 (294)
T PRK07985 194 PHLLDYAATKAAILNYSRGLAKQV 217 (294)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHH
Confidence 322235666665556667777765
No 240
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00065 Score=59.39 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=75.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc----CC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC----TG 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~----~~ 81 (300)
||+.|+||+|.+|++++..|++.|. ++++++.++ ++++....++. .. ....++.-..+..+.+ +.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~-~~-~~~~D~~~~~~v~~~~~~~~~~ 69 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH-------KVTLVGARR--DDLEVAAKELD-VD-AIVCDNTDPASLEEARGLFPHH 69 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcc-Cc-EEecCCCCHHHHHHHHHHHhhc
Confidence 4899999999999999999998764 788888753 34432222111 00 0001111111122222 25
Q ss_pred CcEEEEeCCCCCC---C---C--CcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCC
Q 022227 82 VNIAVMVGGFPRK---E---G--MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (300)
Q Consensus 82 aDvVi~~ag~~~~---~---g--~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~ 150 (300)
.|++|+.+|.... + . ++. ...+..|+...-.+.+.+.+.-.+...+|+++... .|.
T Consensus 70 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~-------------~~~ 136 (223)
T PRK05884 70 LDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN-------------PPA 136 (223)
T ss_pred CcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC-------------CCC
Confidence 7999999874210 0 0 111 23456666554455544433211123567666422 111
Q ss_pred CcEEeeehhhHHHHHHHHHHHcC
Q 022227 151 KNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 151 ~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...++.++--...+.+.+++++.
T Consensus 137 ~~~Y~asKaal~~~~~~la~e~~ 159 (223)
T PRK05884 137 GSAEAAIKAALSNWTAGQAAVFG 159 (223)
T ss_pred ccccHHHHHHHHHHHHHHHHHhh
Confidence 22455565555666777777764
No 241
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.0013 Score=58.07 Aligned_cols=159 Identities=14% Similarity=0.061 Sum_probs=82.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh--
Q 022227 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV-- 76 (300)
Q Consensus 2 ~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~-- 76 (300)
+++.++|.|+||+|++|.+++..|+..|. .++++|.+. +.++....++.+.... ...++.-..+..
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 75 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGA-------HVIVSSRKL--DGCQAVADAIVAAGGKAEALACHIGEMEQIDAL 75 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 34557899999999999999999998875 788998753 3343333333221100 000110000111
Q ss_pred -----hhcCCCcEEEEeCCCCC--CC--CCcH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHHHHH
Q 022227 77 -----EACTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILK 142 (300)
Q Consensus 77 -----~a~~~aDvVi~~ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~~~~ 142 (300)
+.+...|++|+.||... .+ ..+. ...+..|......+.+.+.++.. +..++++++.....
T Consensus 76 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------ 149 (252)
T PRK07035 76 FAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV------ 149 (252)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc------
Confidence 12345799999988521 11 1222 23456676665555544433211 12356666643211
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...|....++.++.-...+.+.++++++ +..|+
T Consensus 150 ---~~~~~~~~Y~~sK~al~~~~~~l~~e~~--~~gi~ 182 (252)
T PRK07035 150 ---SPGDFQGIYSITKAAVISMTKAFAKECA--PFGIR 182 (252)
T ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCEE
Confidence 1112222345555555556666676654 33454
No 242
>PRK06196 oxidoreductase; Provisional
Probab=97.69 E-value=0.00041 Score=63.88 Aligned_cols=157 Identities=9% Similarity=0.027 Sum_probs=81.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCCh-------hh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VE 77 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~-------~~ 77 (300)
.++|+||||+|.+|.+++..|+..|. +|++.++++ ++++....++.... ....++.-..+. .+
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~-------~Vv~~~R~~--~~~~~~~~~l~~v~-~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA-------HVIVPARRP--DVAREALAGIDGVE-VVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhhhCe-EEEccCCCHHHHHHHHHHHHh
Confidence 46899999999999999999998875 788888763 33332222221110 000011100011 11
Q ss_pred hcCCCcEEEEeCCCCCCCC----CcHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH---CC
Q 022227 78 ACTGVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEF---AP 146 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~g----~~r~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~---~~ 146 (300)
.+...|++|+.||....+. +.-...+..|... ++.+.+.+++.+ ..++|++|+............ ..
T Consensus 96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~~~~~~~~ 173 (315)
T PRK06196 96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA--GARVVALSSAGHRRSPIRWDDPHFTR 173 (315)
T ss_pred cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCeEEEECCHHhccCCCCccccCccC
Confidence 2356899999998643221 1123345566554 555666665543 246777775321100000000 00
Q ss_pred CCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 147 SIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 147 ~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+++...++.++.-...+...+++++.
T Consensus 174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~ 200 (315)
T PRK06196 174 GYDKWLAYGQSKTANALFAVHLDKLGK 200 (315)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111112355566666666677777653
No 243
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.69 E-value=0.00054 Score=60.26 Aligned_cols=117 Identities=17% Similarity=0.178 Sum_probs=66.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh---
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (300)
.+++.|+||+|++|+.++..|++.|. +++++|.+. +.++....++...... ...++.-..+..++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 73 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA-------KVAVFDLNR--EAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAA 73 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 46899999999999999999998875 788998763 3333222233221100 00011000011122
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEecC
Q 022227 79 ----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN 132 (300)
Q Consensus 79 ----~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~----~~~~~~~~viv~sN 132 (300)
+...|++|+.+|..... ..+. ...+..|+.....+.+.+. +.. ..+++++++
T Consensus 74 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~iss 139 (250)
T TIGR03206 74 AEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG--AGRIVNIAS 139 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEECc
Confidence 23589999999864221 1122 2346677777766655554 332 235777765
No 244
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.68 E-value=0.0011 Score=57.78 Aligned_cols=119 Identities=18% Similarity=0.148 Sum_probs=62.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV---- 76 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~---- 76 (300)
++++|.|+||+|.+|+.++..|+++|. ++.++.... .+..+....++...... ...++.-..+..
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 76 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-------DVVVHYRSD-EEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVA 76 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCC-HHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHH
Confidence 456899999999999999999998875 555544432 12222121122111000 000100000111
Q ss_pred ---hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecC
Q 022227 77 ---EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN 132 (300)
Q Consensus 77 ---~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sN 132 (300)
+.+.+.|+||+++|..... ..+. .+.+..|+.....+.+.+ ++... .+++++|.
T Consensus 77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~i~~SS 143 (249)
T PRK12825 77 AAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRG--GRIVNISS 143 (249)
T ss_pred HHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CEEEEECc
Confidence 1234679999999864321 1222 344666777666666665 34332 25666664
No 245
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00064 Score=60.30 Aligned_cols=154 Identities=14% Similarity=0.101 Sum_probs=79.3
Q ss_pred CCC-CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeE-EEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh
Q 022227 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA 75 (300)
Q Consensus 1 m~~-~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~-l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~ 75 (300)
|+. +.++|+|+||+|.+|+.++..|+..|. + |++++.+. +.+.....++...... ...++.-..+.
T Consensus 1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~-------~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~ 71 (260)
T PRK06198 1 MGRLDGKVALVTGGTQGLGAAIARAFAERGA-------AGLVICGRNA--EKGEAQAAELEALGAKAVFVQADLSDVEDC 71 (260)
T ss_pred CCCCCCcEEEEeCCCchHHHHHHHHHHHCCC-------CeEEEEcCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Confidence 443 457899999999999999999998774 4 88888753 3333222222111000 00011000011
Q ss_pred hhh-------cCCCcEEEEeCCCCCCC---CCcHH---HHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecCchhhHH
Q 022227 76 VEA-------CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 76 ~~a-------~~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sNP~~~~~ 138 (300)
.+. +.+.|++|+++|..... ..+.. ..+..|+.....+.+.+ .+... ...++++|+....
T Consensus 72 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~~ss~~~~-- 148 (260)
T PRK06198 72 RRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA-EGTIVNIGSMSAH-- 148 (260)
T ss_pred HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCEEEEECCcccc--
Confidence 111 24689999999875422 12222 23566766555555444 33321 2356666643321
Q ss_pred HHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 139 ~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|....++.++.-...+.+.+++.+.
T Consensus 149 -------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~ 176 (260)
T PRK06198 149 -------GGQPFLAAYCASKGALATLTRNAAYALL 176 (260)
T ss_pred -------cCCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 1122122345555544555566666554
No 246
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.68 E-value=0.00083 Score=59.59 Aligned_cols=157 Identities=14% Similarity=0.095 Sum_probs=84.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh----
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA---- 75 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~---- 75 (300)
++.++|.|+||+|.+|++++..|+..|. ++++.+.+. +.++....++.+.... ...++.-..+.
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~-------~vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~ 79 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDINA--DAANHVVDEIQQLGGQAFACRCDITSEQELSALA 79 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 3457999999999999999999998875 688888753 3333333333221100 00111100111
Q ss_pred ---hhhcCCCcEEEEeCCCCCC--CCCcHH---HHHHhhHHHHHHHHHHHhhh---cCCCeEEEEecCchhhHHHHHHHH
Q 022227 76 ---VEACTGVNIAVMVGGFPRK--EGMERK---DVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 76 ---~~a~~~aDvVi~~ag~~~~--~g~~r~---dl~~~N~~i~~~i~~~i~~~---~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
.+.+...|++|++||.... ...+.. +.+..|+.....+.+.+..+ .. ...+|++|.....
T Consensus 80 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-------- 150 (255)
T PRK06113 80 DFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE-------- 150 (255)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEeccccc--------
Confidence 1223467999999986431 122222 23667777666666665432 12 2356776653321
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.+....++.++.-...+.+.+++.+. +..|+
T Consensus 151 -~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~ 183 (255)
T PRK06113 151 -NKNINMTSYASSKAAASHLVRNMAFDLG--EKNIR 183 (255)
T ss_pred -CCCCCcchhHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 1122222345555555555666666553 44555
No 247
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.67 E-value=0.00041 Score=61.64 Aligned_cols=155 Identities=12% Similarity=0.118 Sum_probs=82.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChh---
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAV--- 76 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~--- 76 (300)
++.+++.||||++.||..++..|+..|. ++++++.++. +.+.. .+..... ....++.-..+..
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~-------~vv~~~~~~~-~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~ 74 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGA-------DIVGVGVAEA-PETQA---QVEALGRKFHFITADLIQQKDIDSIV 74 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCchH-HHHHH---HHHHcCCeEEEEEeCCCCHHHHHHHH
Confidence 3456899999999999999999998875 6888876431 22211 1111000 0000111111111
Q ss_pred ----hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 77 ----EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 77 ----~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
+.+...|++|+.||..... ..+. ...+..|+... +.+.+.+.+... ..++|++++....
T Consensus 75 ~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-~g~ii~isS~~~~------ 147 (251)
T PRK12481 75 SQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN-GGKIINIASMLSF------ 147 (251)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC-CCEEEEeCChhhc------
Confidence 2234579999999875321 1122 23455665544 444444444332 2467777754321
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.+..-.|+.++.-...+.+.+|.++. +..|+
T Consensus 148 ---~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gir 180 (251)
T PRK12481 148 ---QGGIRVPSYTASKSAVMGLTRALATELS--QYNIN 180 (251)
T ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence 1122222456666666677777777764 33454
No 248
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.67 E-value=0.00071 Score=60.84 Aligned_cols=151 Identities=13% Similarity=0.105 Sum_probs=80.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChh----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAV---- 76 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~---- 76 (300)
+.+++.|+||+|.+|++++..|+..|. +++++|.+. +.++....++.+... ....++.-..+..
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 79 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-------KVAILDRNQ--EKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQ 79 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 346899999999999999999998875 788998853 333333223322100 0000110000111
Q ss_pred ---hhcCCCcEEEEeCCCCCCC------------------CCcH---HHHHHhhHHHHH----HHHHHHhhhcCCCeEEE
Q 022227 77 ---EACTGVNIAVMVGGFPRKE------------------GMER---KDVMSKNVSIYK----AQASALEQHAAPNCKVL 128 (300)
Q Consensus 77 ---~a~~~aDvVi~~ag~~~~~------------------g~~r---~dl~~~N~~i~~----~i~~~i~~~~~~~~~vi 128 (300)
+.+...|++|++||..... ..+. ...+..|+.... .+.+.+.+.. ...+|
T Consensus 80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~ii 157 (278)
T PRK08277 80 QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK--GGNII 157 (278)
T ss_pred HHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CcEEE
Confidence 1234789999999853211 1111 223455655443 4445554442 24577
Q ss_pred EecCchhhHHHHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCC
Q 022227 129 VVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (300)
Q Consensus 129 v~sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v 174 (300)
++|.-... ...|....++.++.-...+.+.++.++.-
T Consensus 158 ~isS~~~~---------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~ 194 (278)
T PRK08277 158 NISSMNAF---------TPLTKVPAYSAAKAAISNFTQWLAVHFAK 194 (278)
T ss_pred EEccchhc---------CCCCCCchhHHHHHHHHHHHHHHHHHhCc
Confidence 77643321 12222223555655555666777777653
No 249
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.0047 Score=55.31 Aligned_cols=155 Identities=14% Similarity=0.211 Sum_probs=84.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC----CcccEEEeCChhhh-
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTDAVEA- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~----~~~~v~~~~~~~~a- 78 (300)
+.+.+.||||+|.||..++..|++.|. +|++.|+++ +.++....++...... ...++.-..+..+.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~ 77 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-------DVILLSRNE--ENLKKAREKIKSESNVDVSYIVADLTKREDLERTV 77 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH
Confidence 446789999999999999999998875 788888863 3443333333221000 00111111111122
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCcHH---HHHHhh----HHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHH
Q 022227 79 -----CTGVNIAVMVGGFPRKE---GMERK---DVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~~---g~~r~---dl~~~N----~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
+...|++|+.+|..... ..+.. ..+..| ...++.+.+.+++.. ..++|++|.....
T Consensus 78 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~--~g~Ii~isS~~~~------- 148 (263)
T PRK08339 78 KELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG--FGRIIYSTSVAIK------- 148 (263)
T ss_pred HHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEEcCcccc-------
Confidence 23589999999875421 12222 234445 445666677776553 2467777764321
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.|..-.++.++--...+.+.+|+++. +.+|+
T Consensus 149 --~~~~~~~~y~asKaal~~l~~~la~el~--~~gIr 181 (263)
T PRK08339 149 --EPIPNIALSNVVRISMAGLVRTLAKELG--PKGIT 181 (263)
T ss_pred --CCCCcchhhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1122112344445445566777777765 34454
No 250
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00032 Score=64.19 Aligned_cols=159 Identities=11% Similarity=0.036 Sum_probs=83.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc--cC---CcccEEEeCChhh-
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FP---LLKGVVATTDAVE- 77 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~--~~---~~~~v~~~~~~~~- 77 (300)
+.++|.|+||+|+||++++..|++.|. ++++++++. ++++....++.... .. ...++.-..+..+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-------~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~ 85 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-------HVVLAVRNL--DKGKAAAARITAATPGADVTLQELDLTSLASVRAA 85 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHH
Confidence 346899999999999999999998874 688888753 33332222232110 00 0001100001111
Q ss_pred ------hcCCCcEEEEeCCCCCCCC----CcHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCchhhH-HHH-H
Q 022227 78 ------ACTGVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTN-ALI-L 141 (300)
Q Consensus 78 ------a~~~aDvVi~~ag~~~~~g----~~r~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP~~~~-~~~-~ 141 (300)
.+...|++|+.||....+. +.-...+..|... ++.+.+.+++.. ..++|++|+..... ... .
T Consensus 86 ~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~~ 163 (306)
T PRK06197 86 ADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGGHRIRAAIHF 163 (306)
T ss_pred HHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHHHhccCCCCc
Confidence 1236899999998642211 1112345566655 666777666553 24677777543211 000 0
Q ss_pred HHH--CCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 142 KEF--APSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 142 ~~~--~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
... ...+++...++.+++-...+.+.+++++.
T Consensus 164 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~ 197 (306)
T PRK06197 164 DDLQWERRYNRVAAYGQSKLANLLFTYELQRRLA 197 (306)
T ss_pred cccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 000 00111122356667766777778888775
No 251
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00067 Score=60.30 Aligned_cols=156 Identities=14% Similarity=0.114 Sum_probs=84.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-----CcccEEEeCChhhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-----LLKGVVATTDAVEA 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-----~~~~v~~~~~~~~a 78 (300)
+.+++.|+||+|.+|.+++..|++.|. +++++|.++ ++++....++...... ...++.-..+..++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-------AVALADLDA--ALAERAAAAIARDVAGARVLAVPADVTDAASVAAA 76 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHH
Confidence 456899999999999999999998875 788998863 4444333333221000 00111101111222
Q ss_pred -------cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEecCchhhHHHHH
Q 022227 79 -------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 79 -------~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~----i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
+...|++|+.||..... ..+. ...+..|+.....+.+. +.+.. ...+|++|+....
T Consensus 77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~----- 149 (260)
T PRK07063 77 VAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG--RGSIVNIASTHAF----- 149 (260)
T ss_pred HHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC--CeEEEEECChhhc-----
Confidence 24689999999864311 1122 23355666555444444 44332 2467777654321
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
.+.|....++.++.-...+.+.+++++. +..|+.
T Consensus 150 ----~~~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIrv 183 (260)
T PRK07063 150 ----KIIPGCFPYPVAKHGLLGLTRALGIEYA--ARNVRV 183 (260)
T ss_pred ----cCCCCchHHHHHHHHHHHHHHHHHHHhC--ccCeEE
Confidence 1122222345555555566777777764 345553
No 252
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00062 Score=59.74 Aligned_cols=123 Identities=17% Similarity=0.170 Sum_probs=66.2
Q ss_pred CCCC-CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh
Q 022227 1 MAKE-PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV 76 (300)
Q Consensus 1 m~~~-~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~ 76 (300)
|+.+ ++++.|+||+|.+|..++..|++.|. .|+++++++ +.++....++...... ...++.-..+..
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 71 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFAKAGW-------DLALVARSQ--DALEALAAELRSTGVKAAAYSIDLSNPEAIA 71 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhCCCcEEEEEccCCCHHHHH
Confidence 6553 45799999999999999999998875 688888763 3332222222111000 001111011111
Q ss_pred hh-------cCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecCch
Q 022227 77 EA-------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPA 134 (300)
Q Consensus 77 ~a-------~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sNP~ 134 (300)
.+ +...|++|+++|..... ..+ -...+..|+.....+. +.+.+.. ...++++|+..
T Consensus 72 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~ 144 (241)
T PRK07454 72 PGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG--GGLIINVSSIA 144 (241)
T ss_pred HHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--CcEEEEEccHH
Confidence 12 24589999999875321 112 1234556666544444 4444432 23567766543
No 253
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.64 E-value=0.00037 Score=64.92 Aligned_cols=73 Identities=26% Similarity=0.347 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhc-ccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~-~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
+.++|+||||+|++|+.++..|... +. . ++++++++ .+++.....++.+.. + .+.++++.++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv-~-----~lilv~R~--~~rl~~La~el~~~~------i---~~l~~~l~~a 216 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGV-A-----ELLLVARQ--QERLQELQAELGGGK------I---LSLEEALPEA 216 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCC-C-----EEEEEcCC--HHHHHHHHHHhcccc------H---HhHHHHHccC
Confidence 4579999998899999999999754 32 1 68899875 345544433332111 1 1467889999
Q ss_pred cEEEEeCCCCC
Q 022227 83 NIAVMVGGFPR 93 (300)
Q Consensus 83 DvVi~~ag~~~ 93 (300)
|+||++++.+.
T Consensus 217 DiVv~~ts~~~ 227 (340)
T PRK14982 217 DIVVWVASMPK 227 (340)
T ss_pred CEEEECCcCCc
Confidence 99999998765
No 254
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00028 Score=61.46 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=75.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeC---Chhhhc--C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT---DAVEAC--T 80 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~---~~~~a~--~ 80 (300)
++|.|+||+|.+|+.++..|+..|. +|+++|.++. .++. ..++.+... ...++.-.. ...+.+ .
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~~--~~~~-~~~~~~~~~-~~~D~~d~~~~~~~~~~~~~~ 70 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-------QVTATVRGPQ--QDTA-LQALPGVHI-EKLDMNDPASLDQLLQRLQGQ 70 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-------EEEEEeCCCc--chHH-HHhccccce-EEcCCCCHHHHHHHHHHhhcC
Confidence 5799999999999999999998775 7889988642 2211 111111000 000100000 111222 2
Q ss_pred CCcEEEEeCCCCCC---C--CCcHH---HHHHhhHHHHHHHHHHHhhhcCCC-eEEEEecCchhhHHHHHHHHCCCCCCC
Q 022227 81 GVNIAVMVGGFPRK---E--GMERK---DVMSKNVSIYKAQASALEQHAAPN-CKVLVVANPANTNALILKEFAPSIPAK 151 (300)
Q Consensus 81 ~aDvVi~~ag~~~~---~--g~~r~---dl~~~N~~i~~~i~~~i~~~~~~~-~~viv~sNP~~~~~~~~~~~~~~~p~~ 151 (300)
..|+||+.||.... + ..+.. ..+..|......+.+.+.++..++ ..+++.+...... .. +..+..
T Consensus 71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~-----~~-~~~~~~ 144 (225)
T PRK08177 71 RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSV-----EL-PDGGEM 144 (225)
T ss_pred CCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccc-----cc-CCCCCc
Confidence 58999999987421 1 11222 223445544444544444332112 3344444322110 00 000111
Q ss_pred cEEeeehhhHHHHHHHHHHHcC
Q 022227 152 NITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 152 ~i~~~t~ld~~R~~~~la~~l~ 173 (300)
..++.++.....+.+.++++++
T Consensus 145 ~~Y~~sK~a~~~~~~~l~~e~~ 166 (225)
T PRK08177 145 PLYKASKAALNSMTRSFVAELG 166 (225)
T ss_pred cchHHHHHHHHHHHHHHHHHhh
Confidence 1356666667777778887765
No 255
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.64 E-value=0.00044 Score=65.23 Aligned_cols=79 Identities=20% Similarity=0.332 Sum_probs=52.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhccc----CCCCCCeEEEEEecCCchhhhhhhhhhhhh--hc------cCCcccEEE
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVM----LGTDQPVILHMLDIPPAAEALNGVKMELVD--AA------FPLLKGVVA 71 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~----~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~--~~------~~~~~~v~~ 71 (300)
+++||+|+| +|.-|++++..|...+. |+ + ++.|+.+++..+. +....++.+ .. ..+..++..
T Consensus 10 ~~~ki~ViG-aG~wGtAlA~~l~~n~~~~~~~~--~--~V~lw~~~~~~~~-~~~~~~in~~~~N~~ylp~~~Lp~ni~~ 83 (365)
T PTZ00345 10 GPLKVSVIG-SGNWGSAISKVVGENTQRNYIFH--N--EVRMWVLEEIVEG-EKLSDIINTKHENVKYLPGIKLPDNIVA 83 (365)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHhcCCcccCCC--C--eEEEEEecccccc-hHHHHHHHhcCCCcccCCCCcCCCceEE
Confidence 457999999 79999999999987652 22 1 6777776541100 011222321 11 123468888
Q ss_pred eCChhhhcCCCcEEEEe
Q 022227 72 TTDAVEACTGVNIAVMV 88 (300)
Q Consensus 72 ~~~~~~a~~~aDvVi~~ 88 (300)
++|..+++++||+||++
T Consensus 84 tsdl~eav~~aDiIvlA 100 (365)
T PTZ00345 84 VSDLKEAVEDADLLIFV 100 (365)
T ss_pred ecCHHHHHhcCCEEEEE
Confidence 89988999999988886
No 256
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.0008 Score=57.43 Aligned_cols=142 Identities=14% Similarity=0.118 Sum_probs=77.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|+++|+||+|.+|..++..|.+. . ++++.+.++ + ....|+.+.... . ...+.+...|++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~-------~vi~~~r~~--~---~~~~D~~~~~~~--~------~~~~~~~~id~l 59 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H-------EVITAGRSS--G---DVQVDITDPASI--R------ALFEKVGKVDAV 59 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C-------cEEEEecCC--C---ceEecCCChHHH--H------HHHHhcCCCCEE
Confidence 47999999999999999999875 2 688887753 1 123455443200 0 111223468999
Q ss_pred EEeCCCCCCC---CCcHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEeeehh
Q 022227 86 VMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRL 159 (300)
Q Consensus 86 i~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~t~l 159 (300)
|+.||..... ..+.. +.+..|+.....+.+.+.++-.+...++++|.... . .+.|..-.++.++-
T Consensus 60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~--------~-~~~~~~~~Y~~sK~ 130 (199)
T PRK07578 60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILS--------D-EPIPGGASAATVNG 130 (199)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEccccc--------C-CCCCCchHHHHHHH
Confidence 9999874311 12222 23556666666666555443222334666554221 0 12222122444444
Q ss_pred hHHHHHHHHHHHcCCCCCCeE
Q 022227 160 DHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 160 d~~R~~~~la~~l~v~~~~V~ 180 (300)
-...+.+.++.++ +..|+
T Consensus 131 a~~~~~~~la~e~---~~gi~ 148 (199)
T PRK07578 131 ALEGFVKAAALEL---PRGIR 148 (199)
T ss_pred HHHHHHHHHHHHc---cCCeE
Confidence 4456666777776 34454
No 257
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.61 E-value=0.0005 Score=63.50 Aligned_cols=79 Identities=24% Similarity=0.187 Sum_probs=47.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-CcccEEEeCChhhhc
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEAC 79 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~~~v~~~~~~~~a~ 79 (300)
|.++.|||+|+| +|.||..++..|...|. ++.+++.++ .+.+......+...... ....+...++. ++.
T Consensus 1 ~~~~~m~I~IiG-~GaiG~~lA~~L~~~g~-------~V~~~~r~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 70 (313)
T PRK06249 1 MDSETPRIGIIG-TGAIGGFYGAMLARAGF-------DVHFLLRSD-YEAVRENGLQVDSVHGDFHLPPVQAYRSA-EDM 70 (313)
T ss_pred CCCcCcEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeCC-HHHHHhCCeEEEeCCCCeeecCceEEcch-hhc
Confidence 778889999999 79999999999988763 688888753 22221110011100000 01112233333 357
Q ss_pred CCCcEEEEeC
Q 022227 80 TGVNIAVMVG 89 (300)
Q Consensus 80 ~~aDvVi~~a 89 (300)
..+|+||++-
T Consensus 71 ~~~D~vilav 80 (313)
T PRK06249 71 PPCDWVLVGL 80 (313)
T ss_pred CCCCEEEEEe
Confidence 7899999984
No 258
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.61 E-value=0.0014 Score=58.22 Aligned_cols=150 Identities=14% Similarity=0.103 Sum_probs=78.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChh---
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAV--- 76 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~--- 76 (300)
++.+.+.|+||+|.||.+++..|++.|. +++++|.....+.. .++..... ....++.-..+..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~-------~vv~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 76 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGC-------DIVGINIVEPTETI----EQVTALGRRFLSLTADLRKIDGIPALL 76 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEecCcchHHHH----HHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 3446899999999999999999998875 67888765322111 11111000 0000110000111
Q ss_pred ----hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEecCchhhHHHHHH
Q 022227 77 ----EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 77 ----~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~----~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
+.+...|++|++||..... ..+. .+.+..|+.....+.+.+. +.++ ...++++|+-...
T Consensus 77 ~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~------ 149 (253)
T PRK08993 77 ERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN-GGKIINIASMLSF------ 149 (253)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-CeEEEEECchhhc------
Confidence 1234689999999875321 1122 3346677665555554443 3322 3467776653321
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+..-.++.++.-...+.+.+|+++.
T Consensus 150 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~ 177 (253)
T PRK08993 150 ---QGGIRVPSYTASKSGVMGVTRLMANEWA 177 (253)
T ss_pred ---cCCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence 1112112456666555566666777654
No 259
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.61 E-value=0.00071 Score=61.77 Aligned_cols=104 Identities=18% Similarity=0.226 Sum_probs=59.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh---hhhhhccCCcccEEEeCChhhhcCCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~---dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
|||+|+| +|.+|..++..|.+.|. ++.++|.++ +.++.... .+.+.. ....+...++..+ .+++
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~-~~~~ 67 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQAGH-------DVTLVARRG--AHLDALNENGLRLEDGE--ITVPVLAADDPAE-LGPQ 67 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCh--HHHHHHHHcCCcccCCc--eeecccCCCChhH-cCCC
Confidence 4899999 79999999999998763 799999843 23321111 110100 0011122334433 4899
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~ 138 (300)
|+||++--.. .+.++++.+..+-.++..+|...|..+...
T Consensus 68 d~vila~k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~ 107 (304)
T PRK06522 68 DLVILAVKAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLE 107 (304)
T ss_pred CEEEEecccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHH
Confidence 9999984211 122344444443333556888889876443
No 260
>PRK08589 short chain dehydrogenase; Validated
Probab=97.61 E-value=0.00069 Score=60.94 Aligned_cols=156 Identities=12% Similarity=0.085 Sum_probs=83.6
Q ss_pred CCC-CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChh
Q 022227 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAV 76 (300)
Q Consensus 1 m~~-~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~ 76 (300)
|+. +.+++.||||+|.+|..++..|+..|. ++++++.+ +.++....++.+... ....++.-..+..
T Consensus 1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~-------~vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 70 (272)
T PRK08589 1 MKRLENKVAVITGASTGIGQASAIALAQEGA-------YVLAVDIA---EAVSETVDKIKSNGGKAKAYHVDISDEQQVK 70 (272)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc---HHHHHHHHHHHhcCCeEEEEEeecCCHHHHH
Confidence 542 456899999999999999999998875 78888875 233323333322110 0000110000111
Q ss_pred -------hhcCCCcEEEEeCCCCCCC----CCcH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHH
Q 022227 77 -------EACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 77 -------~a~~~aDvVi~~ag~~~~~----g~~r---~dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~ 138 (300)
+.+...|++|+.||..... ..+. ...+..|+... +.+.+.+.+. +.++|++++....
T Consensus 71 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~-- 145 (272)
T PRK08589 71 DFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ---GGSIINTSSFSGQ-- 145 (272)
T ss_pred HHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCEEEEeCchhhc--
Confidence 1234579999999875321 1122 22344555444 4444545433 2467777754321
Q ss_pred HHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 139 ~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.|..-.++.++.-...+.+.+|++++ +..|+
T Consensus 146 -------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~ 178 (272)
T PRK08589 146 -------AADLYRSGYNAAKGAVINFTKSIAIEYG--RDGIR 178 (272)
T ss_pred -------CCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1122222355555555677777887764 34455
No 261
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.60 E-value=0.00047 Score=61.75 Aligned_cols=168 Identities=17% Similarity=0.235 Sum_probs=89.9
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC-CCcEEE
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GVNIAV 86 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~-~aDvVi 86 (300)
|+|+||+|+||+++...|...|. ++..+-+++ .+.+.. + +.. +..-....+... ++|+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-------~v~iltR~~--~~~~~~---~-~~~------v~~~~~~~~~~~~~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-------QVTILTRRP--PKASQN---L-HPN------VTLWEGLADALTLGIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-------eEEEEEcCC--cchhhh---c-Ccc------ccccchhhhcccCCCCEEE
Confidence 68999999999999999988753 566665543 111111 1 100 001112222233 799999
Q ss_pred EeCCCCCC---CCCc-HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH----HHHHHHCCCCCCCcEEee-e
Q 022227 87 MVGGFPRK---EGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFAPSIPAKNITCL-T 157 (300)
Q Consensus 87 ~~ag~~~~---~g~~-r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~----~~~~~~~~~~p~~~i~~~-t 157 (300)
..||.|-. .... ...+...-+...+.+.+.|.+...+ .++++-++-+..-. ..+.+. +-+.+.|-+- |
T Consensus 62 NLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~-P~~~isaSAvGyYG~~~~~~~tE~--~~~g~~Fla~lc 138 (297)
T COG1090 62 NLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETK-PKVLISASAVGYYGHSGDRVVTEE--SPPGDDFLAQLC 138 (297)
T ss_pred ECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCC-CcEEEecceEEEecCCCceeeecC--CCCCCChHHHHH
Confidence 99998742 2222 3455666788889999999865433 23433332222100 000110 1111223221 2
Q ss_pred hhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC---ceeeeccce
Q 022227 158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS---SQYPDVNHA 199 (300)
Q Consensus 158 ~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~---~~~p~~s~a 199 (300)
..-. .. ..=|+.+|+...-+|.=+|+|.-|. .|.|+++.-
T Consensus 139 ~~WE-~~-a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~g 181 (297)
T COG1090 139 QDWE-EE-ALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLG 181 (297)
T ss_pred HHHH-HH-HhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhc
Confidence 1111 11 1225566777777777778886664 677766553
No 262
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00064 Score=59.97 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=29.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
++|.|+||+|.+|+.++..|++.|. +|++++.++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~-------~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT-------HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC-------EEEEEeCCc
Confidence 4799999999999999999998875 688888754
No 263
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00085 Score=59.68 Aligned_cols=120 Identities=23% Similarity=0.190 Sum_probs=66.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeCChhhh----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA---- 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~~~~~a---- 78 (300)
++|.|+||+|++|+.++..|+..|. ++++++.++ +.++....++....... ..++.-.....++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 72 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-------QLVLAARNE--TRLASLAQELADHGGEALVVPTDVSDAEACERLIEAA 72 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 5799999999999999999998764 688888753 33332222232211000 0000000011111
Q ss_pred ---cCCCcEEEEeCCCCCCCC---C-cH---HHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEecCch
Q 022227 79 ---CTGVNIAVMVGGFPRKEG---M-ER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPA 134 (300)
Q Consensus 79 ---~~~aDvVi~~ag~~~~~g---~-~r---~dl~~~N~~i~~~i~~~i~~~~~-~~~~viv~sNP~ 134 (300)
+.+.|+||+++|...... . +. .+.+..|+.....+.+.+.++-. ...++|++|...
T Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~ 139 (263)
T PRK06181 73 VARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLA 139 (263)
T ss_pred HHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccc
Confidence 236899999998643211 1 22 23466777777777666543211 123567766544
No 264
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.57 E-value=0.00046 Score=60.56 Aligned_cols=101 Identities=20% Similarity=0.201 Sum_probs=58.8
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-cccEEEeCChhhhcCCCcEEE
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNIAV 86 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~~~v~~~~~~~~a~~~aDvVi 86 (300)
|+|+||+|.+|++++..|+..+. +|+.+=++.+.+.+. .+.+..... ..++.-...+.++|+|+|.||
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-------~V~~l~R~~~~~~~~----~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-------SVRALVRDPSSDRAQ----QLQALGAEVVEADYDDPESLVAALKGVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-------CEEEEESSSHHHHHH----HHHHTTTEEEES-TT-HHHHHHHHTTCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-------CcEEEEeccchhhhh----hhhcccceEeecccCCHHHHHHHHcCCceEE
Confidence 78999999999999999998653 455554443222221 122111000 001111225678899999999
Q ss_pred EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 87 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
++-+... . .-.+..+++++++++.+ ++.++.|.
T Consensus 70 ~~~~~~~---~-------~~~~~~~~li~Aa~~ag---Vk~~v~ss 102 (233)
T PF05368_consen 70 SVTPPSH---P-------SELEQQKNLIDAAKAAG---VKHFVPSS 102 (233)
T ss_dssp EESSCSC---C-------CHHHHHHHHHHHHHHHT----SEEEESE
T ss_pred eecCcch---h-------hhhhhhhhHHHhhhccc---cceEEEEE
Confidence 9865432 1 12355567888888874 45566554
No 265
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.0034 Score=58.48 Aligned_cols=158 Identities=17% Similarity=0.117 Sum_probs=82.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeCChh-----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV----- 76 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~~~~----- 76 (300)
.++|+||||+|.+|..++..|+..|. +|++++.++ ++++....++....... ..++.-..+..
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~-------~Vvl~~R~~--~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~ 78 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGA-------KVVLLARGE--EGLEALAAEIRAAGGEALAVVADVADAEAVQAAADR 78 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46899999999999999999998875 788988753 44443333332211000 00110001111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhh----HHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 77 --EACTGVNIAVMVGGFPRKE---GMER---KDVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 77 --~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N----~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
+.+...|++|+.||..... ..+. ...+..| +..++.+.+.+.+.. ...+|++|+-...
T Consensus 79 ~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~--~g~iV~isS~~~~-------- 148 (334)
T PRK07109 79 AEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD--RGAIIQVGSALAY-------- 148 (334)
T ss_pred HHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEeCChhhc--------
Confidence 1234689999999864321 1122 2234444 344555666665543 2356776653321
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEEE
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~ 182 (300)
.+.|....|+.++.-...+...++.++......|+..
T Consensus 149 -~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~ 185 (334)
T PRK07109 149 -RSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVT 185 (334)
T ss_pred -cCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 1122222234444444455566666654433445533
No 266
>PLN00016 RNA-binding protein; Provisional
Probab=97.56 E-value=0.00032 Score=66.37 Aligned_cols=150 Identities=16% Similarity=0.205 Sum_probs=79.2
Q ss_pred CCcEEEEE----cCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCch-hhhhhh----hhhhhhhccCCcccEEEe-C
Q 022227 4 EPVRVLVT----GAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGV----KMELVDAAFPLLKGVVAT-T 73 (300)
Q Consensus 4 ~~~kV~Ii----GAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~-~~l~g~----~~dl~~~~~~~~~~v~~~-~ 73 (300)
.++||+|+ ||+|++|++++..|+..|+ +|+++++.... ..+... ..++.... ...+... .
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-------~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~---v~~v~~D~~ 120 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-------EVTLFTRGKEPSQKMKKEPFSRFSELSSAG---VKTVWGDPA 120 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC-------EEEEEecCCcchhhhccCchhhhhHhhhcC---ceEEEecHH
Confidence 35789999 9999999999999998875 78888875421 111000 00111100 0011110 0
Q ss_pred Chhhhc--CCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCC-
Q 022227 74 DAVEAC--TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA- 150 (300)
Q Consensus 74 ~~~~a~--~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~- 150 (300)
+..+.+ .++|+||++++. +....+.+++++++.+.+ ++|.+|.. .+ |- .....|.
T Consensus 121 d~~~~~~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~gvk--r~V~~SS~-~v--yg---~~~~~p~~ 178 (378)
T PLN00016 121 DVKSKVAGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPGLK--QFLFCSSA-GV--YK---KSDEPPHV 178 (378)
T ss_pred HHHhhhccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcCCC--EEEEEccH-hh--cC---CCCCCCCC
Confidence 122333 579999998642 123456777877766432 46666643 21 10 0001110
Q ss_pred ----CcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC
Q 022227 151 ----KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS 190 (300)
Q Consensus 151 ----~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~ 190 (300)
..... +++..++ +.+..+++..-++...++|....
T Consensus 179 E~~~~~p~~-sK~~~E~----~l~~~~l~~~ilRp~~vyG~~~~ 217 (378)
T PLN00016 179 EGDAVKPKA-GHLEVEA----YLQKLGVNWTSFRPQYIYGPGNN 217 (378)
T ss_pred CCCcCCCcc-hHHHHHH----HHHHcCCCeEEEeceeEECCCCC
Confidence 00111 3333332 23456888888888888897543
No 267
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00083 Score=60.32 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=29.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
+++.||||+|.+|..++..|+..|. +|++.+.+.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-------EVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 5799999999999999999998775 788888753
No 268
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.56 E-value=0.00093 Score=58.73 Aligned_cols=39 Identities=23% Similarity=0.374 Sum_probs=33.0
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
|+.+..++.|+||+|.+|..++..|+..|. .++++|.++
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~-------~vi~~~r~~ 39 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGA-------KLALIDLNQ 39 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 666678999999999999999999998764 688888763
No 269
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.0039 Score=55.92 Aligned_cols=148 Identities=14% Similarity=0.125 Sum_probs=79.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcc--cEEEeC---------C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVATT---------D 74 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~--~v~~~~---------~ 74 (300)
++++||||+|.+|..++..|+..|. .+++++.++ +.++....++......... ....+. .
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-------ELFLTDRDA--DGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence 3799999999999999999998774 688888753 3333332233211100000 000100 1
Q ss_pred hhhhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 75 AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~----~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
..+.+...|++|+++|..... ..+. ...+..|+.....+.+.+. +... ...+|++|.....
T Consensus 72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~g~ii~isS~~~~-------- 142 (272)
T PRK07832 72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR-GGHLVNVSSAAGL-------- 142 (272)
T ss_pred HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CcEEEEEcccccc--------
Confidence 112245689999999864321 1222 2346677776666666543 2222 2467777654321
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.|....++.++.-...+.+.++.++
T Consensus 143 -~~~~~~~~Y~~sK~a~~~~~~~l~~e~ 169 (272)
T PRK07832 143 -VALPWHAAYSASKFGLRGLSEVLRFDL 169 (272)
T ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 122322235555554445666666554
No 270
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00059 Score=60.38 Aligned_cols=147 Identities=14% Similarity=0.170 Sum_probs=74.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-c--ccEEEeCChhhhcC-C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-L--KGVVATTDAVEACT-G 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-~--~~v~~~~~~~~a~~-~ 81 (300)
++|.||||+|.+|+.++..|++.|. .+++.+.++ +.++....+........ . .++.-..+...++. +
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH-------NVIAGVQIA--PQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWD 73 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCC
Confidence 4799999999999999999998874 677777642 22221111111110000 0 01111112233444 7
Q ss_pred CcEEEEeCCCCCCCC---CcH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCC
Q 022227 82 VNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK 151 (300)
Q Consensus 82 aDvVi~~ag~~~~~g---~~r---~dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~ 151 (300)
.|+||++||...... .+. ...+..|+... +.+.+.+.+... .++|++|.-... .+.|..
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~SS~~~~---------~~~~~~ 142 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK--GKVVFTSSMAGL---------ITGPFT 142 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--ceEEEEcChhhc---------cCCCCc
Confidence 999999998753211 111 12344455443 344444444432 356776643211 112222
Q ss_pred cEEeeehhhHHHHHHHHHHHc
Q 022227 152 NITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 152 ~i~~~t~ld~~R~~~~la~~l 172 (300)
..++.++....++...+++.+
T Consensus 143 ~~Y~~sK~a~~~~~~~l~~~~ 163 (257)
T PRK09291 143 GAYCASKHALEAIAEAMHAEL 163 (257)
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 234445555555555555543
No 271
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00068 Score=60.39 Aligned_cols=103 Identities=13% Similarity=0.051 Sum_probs=59.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.+++.||||+|.+|.+++..|+..|. ++++++.++. +.++ ...+ ........++.-..+..+.+...|+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-------~Vi~~~r~~~-~~~~-~~~~--~~~~~~~~D~~~~~~~~~~~~~iDi 82 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-------KVIGLTHSKI-NNSE-SNDE--SPNEWIKWECGKEESLDKQLASLDV 82 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEECCch-hhhh-hhcc--CCCeEEEeeCCCHHHHHHhcCCCCE
Confidence 46899999999999999999998875 6888887531 1111 0000 0000000011111123345678999
Q ss_pred EEEeCCCCCCCCCcH---HHHHHhhHHHHHHHHHHHh
Q 022227 85 AVMVGGFPRKEGMER---KDVMSKNVSIYKAQASALE 118 (300)
Q Consensus 85 Vi~~ag~~~~~g~~r---~dl~~~N~~i~~~i~~~i~ 118 (300)
+|+.||.......+. .+.+..|+.....+++.+.
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 119 (245)
T PRK12367 83 LILNHGINPGGRQDPENINKALEINALSSWRLLELFE 119 (245)
T ss_pred EEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999998743222222 3456778766555555443
No 272
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00049 Score=60.01 Aligned_cols=35 Identities=31% Similarity=0.216 Sum_probs=30.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
.++|.|+||+|.+|+.++..|++.|. ++++++++.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-------~v~~~~r~~ 37 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-------QVIGIARSA 37 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCc
Confidence 46899999999999999999998874 688888754
No 273
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.0013 Score=58.32 Aligned_cols=149 Identities=19% Similarity=0.139 Sum_probs=77.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCcccEEEeCChhhhc-----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC----- 79 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~~~v~~~~~~~~a~----- 79 (300)
+++.|+||+|++|..++..|++.|. ++++++.+. +.++....++..... ....++.-..+...++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD-------RVLALDIDA--AALAAFADALGDARFVPVACDLTDAASLAAALANAAA 73 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999998764 788888753 333222222211000 0000000001111222
Q ss_pred --CCCcEEEEeCCCCCCCC---CcHH---HHHHhhHHHHHHHHHHHhhhc--CCCeEEEEecCchhhHHHHHHHHCCCCC
Q 022227 80 --TGVNIAVMVGGFPRKEG---MERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSIP 149 (300)
Q Consensus 80 --~~aDvVi~~ag~~~~~g---~~r~---dl~~~N~~i~~~i~~~i~~~~--~~~~~viv~sNP~~~~~~~~~~~~~~~p 149 (300)
...|+||+++|...... .+.. ..+..|......+.+.+.... .+...++++|+.... .. .+
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~------~~-~~-- 144 (257)
T PRK07074 74 ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM------AA-LG-- 144 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc------CC-CC--
Confidence 35899999998643221 1222 224456665555555553221 112356666652211 00 11
Q ss_pred CCcEEeeehhhHHHHHHHHHHHcC
Q 022227 150 AKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...++.++.-..++.+.++++++
T Consensus 145 -~~~y~~sK~a~~~~~~~~a~~~~ 167 (257)
T PRK07074 145 -HPAYSAAKAGLIHYTKLLAVEYG 167 (257)
T ss_pred -CcccHHHHHHHHHHHHHHHHHHh
Confidence 11345566666677777787765
No 274
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0056 Score=53.60 Aligned_cols=151 Identities=15% Similarity=0.096 Sum_probs=80.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC--CcccEEEeC----Chh-
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATT----DAV- 76 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~--~~~~v~~~~----~~~- 76 (300)
+.++|.|+||+|++|.+++..|++.|. +++++++++ ++++....++...... ......... +..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 75 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-------TVILVARHQ--KKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQ 75 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCh--HHHHHHHHHHHHcCCCCcceEEeeecccchHHHHH
Confidence 457899999999999999999998775 788998864 3443332222211100 000111110 111
Q ss_pred ------hhc-CCCcEEEEeCCCCC--CC--CCcHH---HHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHH
Q 022227 77 ------EAC-TGVNIAVMVGGFPR--KE--GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 77 ------~a~-~~aDvVi~~ag~~~--~~--g~~r~---dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~ 138 (300)
+.+ ...|+||++||... .+ ..+.. ..+..|+... +.+.+.+.+.. ...++++++....
T Consensus 76 ~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~iv~~ss~~~~-- 151 (239)
T PRK08703 76 FAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP--DASVIFVGESHGE-- 151 (239)
T ss_pred HHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC--CCEEEEEeccccc--
Confidence 112 46799999998642 12 11222 2355666544 44444444432 2356666543211
Q ss_pred HHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCC
Q 022227 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (300)
Q Consensus 139 ~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v 174 (300)
...|...-++.++.-...+.+.++.+++-
T Consensus 152 -------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~ 180 (239)
T PRK08703 152 -------TPKAYWGGFGASKAALNYLCKVAADEWER 180 (239)
T ss_pred -------cCCCCccchHHhHHHHHHHHHHHHHHhcc
Confidence 11121123555666556667777777654
No 275
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0018 Score=57.95 Aligned_cols=117 Identities=20% Similarity=0.165 Sum_probs=63.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh-----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE----- 77 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~----- 77 (300)
++|.||||+|.+|+.++..|+..|. ++++.+.+. ++++....++...... ...++.-..+..+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i 71 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-------RLALADVNE--EGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQAC 71 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 3799999999999999999998875 688888753 3343332233221100 0001000001111
Q ss_pred --hcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCc
Q 022227 78 --ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 78 --a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP 133 (300)
.+...|++|+.||..... ..+. ...+..|+... +.+.+.+++... ..++++|+.
T Consensus 72 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS~ 137 (270)
T PRK05650 72 EEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKS--GRIVNIASM 137 (270)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC--CEEEEECCh
Confidence 224689999999874321 1122 22456665444 444455555432 356666653
No 276
>PRK09242 tropinone reductase; Provisional
Probab=97.53 E-value=0.00091 Score=59.35 Aligned_cols=149 Identities=15% Similarity=0.129 Sum_probs=81.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-----CcccEEEeC-----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-----LLKGVVATT----- 73 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-----~~~~v~~~~----- 73 (300)
+.+++.|+||+|.+|..++..|++.|. +|++++.+. +.++....++...... ...++.-..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~ 78 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-------DVLIVARDA--DALAQARDELAEEFPEREVHGLAADVSDDEDRRAI 78 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence 456899999999999999999998775 788888753 4444333333322100 000110000
Q ss_pred --ChhhhcCCCcEEEEeCCCCCC-C--CCcH---HHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecCchhhHHHHH
Q 022227 74 --DAVEACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 74 --~~~~a~~~aDvVi~~ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
...+.+...|++|+++|.... + ..+. ...+..|+.....+.+.+ ++.. ...+|++|.....
T Consensus 79 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~sS~~~~----- 151 (257)
T PRK09242 79 LDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA--SSAIVNIGSVSGL----- 151 (257)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CceEEEECccccC-----
Confidence 112234568999999986321 1 1122 234566666555554444 3332 2356666653321
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.+....++.++.-...+...++.++
T Consensus 152 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~ 178 (257)
T PRK09242 152 ----THVRSGAPYGMTKAALLQMTRNLAVEW 178 (257)
T ss_pred ----CCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 112222245666665666666677665
No 277
>PLN02503 fatty acyl-CoA reductase 2
Probab=97.52 E-value=0.00049 Score=68.93 Aligned_cols=112 Identities=21% Similarity=0.150 Sum_probs=65.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhh-hhhhhhhhhhc--------cC------CcccE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAA--------FP------LLKGV 69 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l-~g~~~dl~~~~--------~~------~~~~v 69 (300)
.++|.||||+||+|..++..|+...- +. .+|+++.+.++.+.+ +....++.+.. .+ ...++
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~---~v-~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki 194 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNP---DV-GKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL 194 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCC---CC-cEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence 47899999999999999999986431 00 156776554321111 11111111100 00 01111
Q ss_pred EE-eCC------------hhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhc
Q 022227 70 VA-TTD------------AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA 121 (300)
Q Consensus 70 ~~-~~~------------~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~ 121 (300)
+. ..| .....+++|+|||+|+... ...+..+....|+...+++++.+.+..
T Consensus 195 ~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~ 258 (605)
T PLN02503 195 VPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCK 258 (605)
T ss_pred EEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11 111 1222467999999998654 234456678889999999999988763
No 278
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.52 E-value=0.00085 Score=61.85 Aligned_cols=53 Identities=13% Similarity=0.194 Sum_probs=42.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..|||+|+| +|.+|++++..|...|. +|.++|+++. .+..++++++|
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~-------~V~~~~r~~~-------------------------~~~~~~~~~ad 49 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGH-------RVRVWSRRSG-------------------------LSLAAVLADAD 49 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCC-------EEEEEeCCCC-------------------------CCHHHHHhcCC
Confidence 457999999 79999999999998774 7899998531 14557788999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+||++.
T Consensus 50 vvi~~v 55 (308)
T PRK14619 50 VIVSAV 55 (308)
T ss_pred EEEEEC
Confidence 999874
No 279
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.51 E-value=0.0017 Score=57.01 Aligned_cols=150 Identities=10% Similarity=0.068 Sum_probs=73.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeCChh-----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV----- 76 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~~~~----- 76 (300)
.+.+.|+||+|++|..++..|++.|. ++++..... .+..+....++....... ..++.-..+..
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 74 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-------KVVAGCGPN-SPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDK 74 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCCC-hHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 35789999999999999999998874 566643211 111111111221111000 00110000111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHH----HHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 77 --EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 77 --~a~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~----i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
+.+...|+||++||..... ..+ -...+..|...... +.+.+.+.. ..+++++|.....
T Consensus 75 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~-------- 144 (246)
T PRK12938 75 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG--WGRIINISSVNGQ-------- 144 (246)
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEEechhcc--------
Confidence 2234689999999875421 111 23446667665444 444444332 2357777653211
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+....++.++.....+...++++++
T Consensus 145 -~~~~~~~~y~~sK~a~~~~~~~l~~~~~ 172 (246)
T PRK12938 145 -KGQFGQTNYSTAKAGIHGFTMSLAQEVA 172 (246)
T ss_pred -CCCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 1112122344444444455666666654
No 280
>PRK09186 flagellin modification protein A; Provisional
Probab=97.50 E-value=0.0012 Score=58.42 Aligned_cols=163 Identities=17% Similarity=0.135 Sum_probs=81.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-ccC---C-cccEEEeCChhhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP---L-LKGVVATTDAVEA 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-~~~---~-~~~v~~~~~~~~a 78 (300)
+.++|.|+||+|.+|.+++..|+..|. ++++.+.++ ++++....++... ... . ..++.-.++..++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-------IVIAADIDK--EALNELLESLGKEFKSKKLSLVELDITDQESLEEF 73 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecCh--HHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHH
Confidence 457899999999999999999998875 688888753 3333332233111 000 0 0111111112222
Q ss_pred cC-------CCcEEEEeCCCCCC----C--CCcH---HHHHHhhH----HHHHHHHHHHhhhcCCCeEEEEecCchhhHH
Q 022227 79 CT-------GVNIAVMVGGFPRK----E--GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 79 ~~-------~aDvVi~~ag~~~~----~--g~~r---~dl~~~N~----~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~ 138 (300)
++ ..|+||++|+.... + ..+. ...+..|+ ...+.+.+.+++... .++|++|.-.....
T Consensus 74 ~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~ 151 (256)
T PRK09186 74 LSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGG--GNLVNISSIYGVVA 151 (256)
T ss_pred HHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC--ceEEEEechhhhcc
Confidence 32 37999999875321 1 1221 22344454 444555566554432 36666664221110
Q ss_pred HHHHHHCCCCCCC--cEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 139 LILKEFAPSIPAK--NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 139 ~~~~~~~~~~p~~--~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.-..-. .+.+.. ..++.++.-...+.+.+++.+. +..++
T Consensus 152 ~~~~~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~i~ 192 (256)
T PRK09186 152 PKFEIY-EGTSMTSPVEYAAIKAGIIHLTKYLAKYFK--DSNIR 192 (256)
T ss_pred ccchhc-cccccCCcchhHHHHHHHHHHHHHHHHHhC--cCCeE
Confidence 000000 111111 1356566656666667777653 34454
No 281
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.50 E-value=0.0018 Score=59.94 Aligned_cols=151 Identities=18% Similarity=0.165 Sum_probs=84.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-Ccc--cEEEeCC-------
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLK--GVVATTD------- 74 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~~--~v~~~~~------- 74 (300)
...+.||||+|.||.+++..|+..|. +|+++++++ ++++....++...... ... ....+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~ 123 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL-------NLVLVARNP--DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKR 123 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------CEEEEECCH--HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHH
Confidence 35799999999999999999998875 689999863 5665554455331100 000 0111111
Q ss_pred hhhhcC--CCcEEEEeCCCCCC---C--CCcH---HHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEecCchhhHHHH
Q 022227 75 AVEACT--GVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALI 140 (300)
Q Consensus 75 ~~~a~~--~aDvVi~~ag~~~~---~--g~~r---~dl~~~N~~i~~~i~~~----i~~~~~~~~~viv~sNP~~~~~~~ 140 (300)
..+.+. |.|++|+.||.... + ..+. .+.+..|+.....+.+. +.+.. ...+|++|+-...
T Consensus 124 l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~---- 197 (320)
T PLN02780 124 IKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIINIGSGAAI---- 197 (320)
T ss_pred HHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--CcEEEEEechhhc----
Confidence 122233 45699999987421 1 1222 23566776655555544 44433 2357777653321
Q ss_pred HHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 141 ~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
..+..|....++.++.-...+...++.++.
T Consensus 198 ---~~~~~p~~~~Y~aSKaal~~~~~~L~~El~ 227 (320)
T PLN02780 198 ---VIPSDPLYAVYAATKAYIDQFSRCLYVEYK 227 (320)
T ss_pred ---cCCCCccchHHHHHHHHHHHHHHHHHHHHh
Confidence 001223223466666666677777777764
No 282
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00044 Score=60.87 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=29.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
+++.|+||+|++|..++..|++.|. ++++++.+.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~-------~v~~~~r~~ 35 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGI-------AVLGVARSR 35 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCC-------EEEEEecCc
Confidence 5899999999999999999998774 688888754
No 283
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.49 E-value=0.00085 Score=58.44 Aligned_cols=149 Identities=15% Similarity=0.135 Sum_probs=80.1
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhhc-----
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC----- 79 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a~----- 79 (300)
|.|+|++|++|+.++..|+++|. ++++++.+. .+.++....++.+.... ...++.-..+..+.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA-------KVIITYRSS-EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCc-hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 47999999999999999998875 788887753 12333232333221100 001111111112222
Q ss_pred --CCCcEEEEeCCCCCCC---C---CcHHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHHHHHHHCCCCC
Q 022227 80 --TGVNIAVMVGGFPRKE---G---MERKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAPSIP 149 (300)
Q Consensus 80 --~~aDvVi~~ag~~~~~---g---~~r~dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~~~~~~~~~~p 149 (300)
...|+||+.+|..... . .+..+.+..|+.....+.+.+.++.. +..+++++|..... .+.|
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~---------~g~~ 143 (239)
T TIGR01830 73 ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL---------MGNA 143 (239)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc---------CCCC
Confidence 3469999999864311 1 12244567788877777777665421 12356776654321 1223
Q ss_pred CCcEEeeehhhHHHHHHHHHHHcC
Q 022227 150 AKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 150 ~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...-++.++.-...+.+.+++++.
T Consensus 144 ~~~~y~~~k~a~~~~~~~l~~~~~ 167 (239)
T TIGR01830 144 GQANYAASKAGVIGFTKSLAKELA 167 (239)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHh
Confidence 222345555444455555666553
No 284
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.49 E-value=0.0012 Score=58.83 Aligned_cols=155 Identities=14% Similarity=0.121 Sum_probs=80.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc--CCcccEEEeCChh-------
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAV------- 76 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~--~~~~~v~~~~~~~------- 76 (300)
|++.||||+|.+|..++..|++.|. ++++.++++ ++++....++.+... ....++.-..+..
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA-------RVVISSRNE--ENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAW 71 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHH
Confidence 4899999999999999999998875 788888763 344333333322110 0001111001111
Q ss_pred hhcCCCcEEEEeCCCCCC-----CCCcHHHH---HHhhH----HHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 77 EACTGVNIAVMVGGFPRK-----EGMERKDV---MSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~-----~g~~r~dl---~~~N~----~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
+.+...|++|+.||.... ...+..++ +..|. -..+.+.+.+.+... ...+|++|+....
T Consensus 72 ~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~iv~isS~~~~-------- 142 (259)
T PRK08340 72 ELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVLVYLSSVSVK-------- 142 (259)
T ss_pred HhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEEEEEeCcccC--------
Confidence 123468999999986421 11222222 23343 223444555443222 2457777654320
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
...|....++.++--...+.+.+|+.++ +..|+.
T Consensus 143 -~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~gI~v 176 (259)
T PRK08340 143 -EPMPPLVLADVTRAGLVQLAKGVSRTYG--GKGIRA 176 (259)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHhC--CCCEEE
Confidence 1123222344455555566777887765 445553
No 285
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0018 Score=56.86 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=78.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA---- 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a---- 78 (300)
..++|+||+|++|++++..|+..|. .+++.+... .++++....++...... ...++.-..+..++
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGY-------AVCLNYLRN-RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAV 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------eEEEecCCC-HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHH
Confidence 4689999999999999999998764 566766432 23332222222211100 00111111112222
Q ss_pred ---cCCCcEEEEeCCCCCCC----CCcH---HHHHHhhHHHHHHHHHHHhhhc-----CCCeEEEEecCchhhHHHHHHH
Q 022227 79 ---CTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEQHA-----APNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 79 ---~~~aDvVi~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~-----~~~~~viv~sNP~~~~~~~~~~ 143 (300)
+...|+||++||..... ..+. ...+..|+.....+.+.+.+.- .+...++++|+....
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~------- 147 (248)
T PRK06123 75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR------- 147 (248)
T ss_pred HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc-------
Confidence 23679999999875321 1122 2346677776655554444321 112357777764421
Q ss_pred HCCCCCCC-cEEeeehhhHHHHHHHHHHHc
Q 022227 144 FAPSIPAK-NITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 144 ~~~~~p~~-~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.|.. .-++.++.....+...+++++
T Consensus 148 --~~~~~~~~~Y~~sKaa~~~~~~~la~~~ 175 (248)
T PRK06123 148 --LGSPGEYIDYAASKGAIDTMTIGLAKEV 175 (248)
T ss_pred --CCCCCCccchHHHHHHHHHHHHHHHHHh
Confidence 112211 125666666667777777776
No 286
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0013 Score=59.11 Aligned_cols=148 Identities=13% Similarity=0.067 Sum_probs=77.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh-----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV----- 76 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~----- 76 (300)
.+.++|+||+|++|.+++..|+..|. ++++.+.+. +.+.....++...... ...+++-..+..
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 80 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-------PVALGARRV--EKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQ 80 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 35799999999999999999998875 677777642 3332221111110000 000111001111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 77 --EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 77 --~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~----~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
+.+...|++|++||..... ..+. .+.+..|+.....+.+.+. +.. ..+++++|+... +
T Consensus 81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~g~iv~isS~~~--------~ 150 (274)
T PRK07775 81 AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR--RGDLIFVGSDVA--------L 150 (274)
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CceEEEECChHh--------c
Confidence 1234689999999875321 1111 2345667766666655543 322 235666665321 1
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.|....++.++.-...+...+++.+
T Consensus 151 -~~~~~~~~Y~~sK~a~~~l~~~~~~~~ 177 (274)
T PRK07775 151 -RQRPHMGAYGAAKAGLEAMVTNLQMEL 177 (274)
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 122322235556665666666777665
No 287
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.48 E-value=0.00039 Score=55.03 Aligned_cols=73 Identities=16% Similarity=0.223 Sum_probs=42.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeE-EEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~-l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
||+|+||+|++|..++..|..... .+ +.+++...+ .|....-..........+.+.....+.++++|+|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~------~e~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv 70 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD------FELVALVSSSRS----AGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVV 70 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST------EEEEEEEESTTT----TTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC------ccEEEeeeeccc----cCCeeehhccccccccceeEeecchhHhhcCCEE
Confidence 799999999999999999887533 24 455555421 1121111111111122333443445678999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|.+.
T Consensus 71 f~a~ 74 (121)
T PF01118_consen 71 FLAL 74 (121)
T ss_dssp EE-S
T ss_pred EecC
Confidence 9984
No 288
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.47 E-value=0.0019 Score=62.49 Aligned_cols=120 Identities=28% Similarity=0.336 Sum_probs=68.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCCh-------hh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VE 77 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~-------~~ 77 (300)
.+++.|+||+|.+|..++..|+..|. +++++|.....+.+.....++.... ...++.-..+. .+
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga-------~vi~~~~~~~~~~l~~~~~~~~~~~--~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA-------HVVCLDVPAAGEALAAVANRVGGTA--LALDITAPDAPARIAEHLAE 280 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCccHHHHHHHHHHcCCeE--EEEeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999998774 7888887543333322211111000 00000000011 11
Q ss_pred hcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhh--cCCCeEEEEecCc
Q 022227 78 ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQH--AAPNCKVLVVANP 133 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~--~~~~~~viv~sNP 133 (300)
.+...|+||++||..... ..+. ...+..|+.....+.+.+... -.++.++|++|+.
T Consensus 281 ~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~ 344 (450)
T PRK08261 281 RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSI 344 (450)
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECCh
Confidence 123589999999975422 1222 345677888888888777652 1123467777753
No 289
>PRK06484 short chain dehydrogenase; Validated
Probab=97.46 E-value=0.00097 Score=65.60 Aligned_cols=151 Identities=18% Similarity=0.177 Sum_probs=85.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCCh-------hh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VE 77 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~-------~~ 77 (300)
.+++.||||+|.||..++..|+..|. .|++.|+++ ++++....++.........++.-..+. .+
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 339 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD-------RLLIIDRDA--EGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA 339 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999998875 788898853 333322211110000000011000011 12
Q ss_pred hcCCCcEEEEeCCCCC--CC--CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCC
Q 022227 78 ACTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~ 150 (300)
.+...|++|+.||... .+ ..+. ...+..|+.....+.+.+..+-.+...+|++|+.... .+.|.
T Consensus 340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~ 410 (520)
T PRK06484 340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL---------LALPP 410 (520)
T ss_pred HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc---------CCCCC
Confidence 2345799999999752 11 1222 3456778777666666554432223467777764431 12232
Q ss_pred CcEEeeehhhHHHHHHHHHHHcC
Q 022227 151 KNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 151 ~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.-.|+.++.-...+.+.+++++.
T Consensus 411 ~~~Y~asKaal~~l~~~la~e~~ 433 (520)
T PRK06484 411 RNAYCASKAAVTMLSRSLACEWA 433 (520)
T ss_pred CchhHHHHHHHHHHHHHHHHHhh
Confidence 33466666666677777887764
No 290
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.45 E-value=0.0017 Score=56.80 Aligned_cols=154 Identities=14% Similarity=0.173 Sum_probs=78.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchh----hhhhhhhhhhhhccCCcccEEEeCChhhhcCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE----ALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~----~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (300)
|+|+|+||+|.||+.++..|++++. + ..+.+.+.+...+ ++.....|+.+... + ....+.+..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-~----~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~-----~---~~~~~~~~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-D----ATVHATYRHHKPDFQHDNVQWHALDVTDEAE-----I---KQLSEQFTQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-C----CEEEEEccCCccccccCceEEEEecCCCHHH-----H---HHHHHhcCC
Confidence 4899999999999999999988642 1 1455555532111 01112223332210 0 012344678
Q ss_pred CcEEEEeCCCCCCC---------CCcHH---HHHHhhH----HHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHC
Q 022227 82 VNIAVMVGGFPRKE---------GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 82 aDvVi~~ag~~~~~---------g~~r~---dl~~~N~----~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
.|++|++||..... ..+.. ..+..|+ .+.+.+.+.+++.. ..+++++|...... ..
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~--~~~i~~iss~~~~~----~~-- 139 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE--SAKFAVISAKVGSI----SD-- 139 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC--CceEEEEeeccccc----cc--
Confidence 99999999975321 11222 2234444 34445555454332 23566665322111 00
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...|....++.++.-...+.+.++.++.-...+++
T Consensus 140 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~ 174 (235)
T PRK09009 140 NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGV 174 (235)
T ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeE
Confidence 11222224555666556677777777654333454
No 291
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0022 Score=59.67 Aligned_cols=151 Identities=15% Similarity=0.114 Sum_probs=81.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeCChhhh-
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA- 78 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~~~~~a- 78 (300)
.+.++|+||||+|.||..++..|++.|. +|++++.++ ++++....++....... ..++.-..+..+.
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~-------~Vvl~~R~~--~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 75 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGA-------RLVLAARDE--EALQAVAEECRALGAEVLVVPTDVTDADQVKALA 75 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence 3457899999999999999999998875 789998863 45543333333211000 0011100111111
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHH----HHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 79 ------~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~----i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
+...|++|+.||..... ..+ -.+.+..|.-.... ..+.+.+.. ...+|++++....
T Consensus 76 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~--~g~iV~isS~~~~------ 147 (330)
T PRK06139 76 TQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG--HGIFINMISLGGF------ 147 (330)
T ss_pred HHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC--CCEEEEEcChhhc------
Confidence 24679999999875321 111 12345666554444 444444443 2356666643211
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|..-.|+.++.-...+...++.++.
T Consensus 148 ---~~~p~~~~Y~asKaal~~~~~sL~~El~ 175 (330)
T PRK06139 148 ---AAQPYAAAYSASKFGLRGFSEALRGELA 175 (330)
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 1223222455555555556666666664
No 292
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0007 Score=59.98 Aligned_cols=158 Identities=16% Similarity=0.180 Sum_probs=83.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCCh----
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDA---- 75 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~---- 75 (300)
.+.+++.||||+|.+|..++..|+..|. +|++.+.+. ++++....++..... ....++.-..+.
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 77 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGA-------QVAIAARHL--DALEKLADEIGTSGGKVVPVCCDVSQHQQVTSML 77 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 4457899999999999999999998875 788888753 444433333322110 000011100111
Q ss_pred ---hhhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecCchhhHHHHHH
Q 022227 76 ---VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 76 ---~~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
.+.+...|++|+.||..... ..+. .+.+..|+.....+.+.+ .+... ...++++++-..
T Consensus 78 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~------- 149 (253)
T PRK05867 78 DQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ-GGVIINTASMSG------- 149 (253)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC-CcEEEEECcHHh-------
Confidence 12234789999999875321 1122 234556665555554444 33322 234555553221
Q ss_pred HHCCCCCCC-cEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 143 EFAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 143 ~~~~~~p~~-~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.. ...|.. ..|+.++.-...+.+.+++++. +..|+
T Consensus 150 ~~-~~~~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~ 185 (253)
T PRK05867 150 HI-INVPQQVSHYCASKAAVIHLTKAMAVELA--PHKIR 185 (253)
T ss_pred cC-CCCCCCccchHHHHHHHHHHHHHHHHHHh--HhCeE
Confidence 00 111222 2355566666677777777764 33454
No 293
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.44 E-value=0.002 Score=58.49 Aligned_cols=72 Identities=19% Similarity=0.187 Sum_probs=47.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+.|||++|| +|.+|.+++..|+..+... +.++.++|+.. +++++. +.... .+....+..+++++||
T Consensus 2 ~~mkI~~IG-~G~mG~aia~~l~~~g~~~---~~~v~v~~r~~-~~~~~~----l~~~~-----g~~~~~~~~e~~~~aD 67 (279)
T PRK07679 2 SIQNISFLG-AGSIAEAIIGGLLHANVVK---GEQITVSNRSN-ETRLQE----LHQKY-----GVKGTHNKKELLTDAN 67 (279)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCC-HHHHHH----HHHhc-----CceEeCCHHHHHhcCC
Confidence 346999999 8999999999999876321 22688888742 223332 21110 1234456667789999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+||++.
T Consensus 68 vVilav 73 (279)
T PRK07679 68 ILFLAM 73 (279)
T ss_pred EEEEEe
Confidence 999984
No 294
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.44 E-value=0.0021 Score=62.00 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=52.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC----------CcccEEEe
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----------LLKGVVAT 72 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~----------~~~~v~~~ 72 (300)
.++|||+||| .|+||..++..|.. ++ +++.+|+++ ++.+. +.....+ ....+..+
T Consensus 4 ~~~mkI~vIG-lGyvGlpmA~~la~-~~-------~V~g~D~~~--~~ve~----l~~G~~~~~e~~~~~l~~~g~l~~t 68 (425)
T PRK15182 4 IDEVKIAIIG-LGYVGLPLAVEFGK-SR-------QVVGFDVNK--KRILE----LKNGVDVNLETTEEELREARYLKFT 68 (425)
T ss_pred CCCCeEEEEC-cCcchHHHHHHHhc-CC-------EEEEEeCCH--HHHHH----HHCcCCCCCCCCHHHHHhhCCeeEE
Confidence 3678999999 99999999998776 32 799999974 44332 2222111 01234556
Q ss_pred CChhhhcCCCcEEEEeCCCCCC
Q 022227 73 TDAVEACTGVNIAVMVGGFPRK 94 (300)
Q Consensus 73 ~~~~~a~~~aDvVi~~ag~~~~ 94 (300)
++. +++++||++|++.+.|.+
T Consensus 69 ~~~-~~~~~advvii~Vptp~~ 89 (425)
T PRK15182 69 SEI-EKIKECNFYIITVPTPIN 89 (425)
T ss_pred eCH-HHHcCCCEEEEEcCCCCC
Confidence 554 579999999999887753
No 295
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.44 E-value=0.0013 Score=67.19 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=80.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-----CCcccEEEeCChhhhc
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-----PLLKGVVATTDAVEAC 79 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-----~~~~~v~~~~~~~~a~ 79 (300)
.++|.||||+|+||++++..|++.|. +|+++|++. +.++....++..... ....+++-..+..+++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga-------~Vvi~~r~~--~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~ 484 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA-------HVVLADLNL--EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF 484 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence 36899999999999999999998875 789999863 334332222321100 0001111111122222
Q ss_pred -------CCCcEEEEeCCCCCCC---CCcHH---HHHHhhHH----HHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 80 -------TGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 80 -------~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~----i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
.+.|++|+.||..... ..+.. ..+..|+. ..+...+.+++.+. ...+|++|+....
T Consensus 485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~-~g~IV~iSS~~a~------ 557 (676)
T TIGR02632 485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL-GGNIVFIASKNAV------ 557 (676)
T ss_pred HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEeChhhc------
Confidence 3689999999975321 11222 22334443 33455555555432 2356666543211
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|....++.++.....+.+.++.+++
T Consensus 558 ---~~~~~~~aY~aSKaA~~~l~r~lA~el~ 585 (676)
T TIGR02632 558 ---YAGKNASAYSAAKAAEAHLARCLAAEGG 585 (676)
T ss_pred ---CCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 1122222456666666677777787765
No 296
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.43 E-value=0.0023 Score=61.94 Aligned_cols=66 Identities=18% Similarity=0.320 Sum_probs=46.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+||+|.+|.+++..|...|. ++.++|.++ +.+...+.++ .+...++..++++++|+|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~-------~V~v~~r~~--~~~~~~a~~~---------gv~~~~~~~e~~~~aDvV 62 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF-------EVIVTGRDP--KKGKEVAKEL---------GVEYANDNIDAAKDADIV 62 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC-------EEEEEECCh--HHHHHHHHHc---------CCeeccCHHHHhccCCEE
Confidence 4899998789999999999988764 688999763 3222111111 122345677889999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 63 Ilav 66 (437)
T PRK08655 63 IISV 66 (437)
T ss_pred EEec
Confidence 9984
No 297
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0039 Score=55.08 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
+.++|.|+||+|+||++++..|+..|. ++++++.++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-------~Vi~~~r~~ 43 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-------KVVLASRRV 43 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 357999999999999999999998764 688888753
No 298
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.00075 Score=59.90 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=80.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh--
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE-- 77 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~-- 77 (300)
++.+++.|+||+|.+|++++..|++.|. ++++.|.+.. +.++....++.+.... ...++.-..+..+
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~-------~v~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~ 77 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGA-------DVALFDLRTD-DGLAETAEHIEAAGRRAIQIAADVTSKADLRAAV 77 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4557899999999999999999998875 7888887532 2222222223221100 0001100011111
Q ss_pred -----hcCCCcEEEEeCCCCCCCC---CcH---HHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 78 -----ACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 78 -----a~~~aDvVi~~ag~~~~~g---~~r---~dl~~~N~~i~~~i----~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
.+...|++|++||...... .+. ...+..|+.....+ .+.+.+.. ...+|++|.......
T Consensus 78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~~---- 151 (254)
T PRK06114 78 ARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG--GGSIVNIASMSGIIV---- 151 (254)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC--CcEEEEECchhhcCC----
Confidence 2334699999999753211 122 23455676555444 44444332 235666665332100
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.++. ...-++.++.-...+.+.+|+++. +..|+
T Consensus 152 --~~~~-~~~~Y~~sKaa~~~l~~~la~e~~--~~gi~ 184 (254)
T PRK06114 152 --NRGL-LQAHYNASKAGVIHLSKSLAMEWV--GRGIR 184 (254)
T ss_pred --CCCC-CcchHHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence 0110 011244444444456666776654 33454
No 299
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.41 E-value=0.0026 Score=55.99 Aligned_cols=151 Identities=13% Similarity=0.045 Sum_probs=75.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEE-ecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh-
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~-D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a- 78 (300)
+.++++|+||+|.+|..++..|++.|. ++++. +.+ .++++....++...... ...++.-..+...+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-------~v~~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-------DIAVNYARS--RKAAEETAEEIEALGRKALAVKANVGDVEKIKEMF 73 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC--HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 346899999999999999999998774 55553 443 23333222222211100 00011101111122
Q ss_pred ------cCCCcEEEEeCCCCCC-C--CCcHH---HHHHhhHHHHHHHHHHHhhhcC--CCeEEEEecCchhhHHHHHHHH
Q 022227 79 ------CTGVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 79 ------~~~aDvVi~~ag~~~~-~--g~~r~---dl~~~N~~i~~~i~~~i~~~~~--~~~~viv~sNP~~~~~~~~~~~ 144 (300)
+...|+||+.||.... + ..+.. ..+..|......+++.+.++.. +..++|++|+... .
T Consensus 74 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--------~ 145 (250)
T PRK08063 74 AQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGS--------I 145 (250)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhh--------c
Confidence 2358999999986421 1 11222 2345666555555555544321 1235666665221 0
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
...|....++.++.-...+...+++.+
T Consensus 146 -~~~~~~~~y~~sK~a~~~~~~~~~~~~ 172 (250)
T PRK08063 146 -RYLENYTTVGVSKAALEALTRYLAVEL 172 (250)
T ss_pred -cCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 112222345556666666666666654
No 300
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.39 E-value=0.0013 Score=60.53 Aligned_cols=73 Identities=30% Similarity=0.299 Sum_probs=48.2
Q ss_pred CCCC-CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc
Q 022227 1 MAKE-PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (300)
Q Consensus 1 m~~~-~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~ 79 (300)
|+.. .+||+|+| +|.+|..++..|...+.. .++.++|.++ +.++. ..+. . . ......+..+++
T Consensus 1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~-----~~V~~~dr~~--~~~~~-a~~~---g--~--~~~~~~~~~~~~ 64 (307)
T PRK07502 1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLA-----GEIVGADRSA--ETRAR-AREL---G--L--GDRVTTSAAEAV 64 (307)
T ss_pred CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCC-----cEEEEEECCH--HHHHH-HHhC---C--C--CceecCCHHHHh
Confidence 6554 37999999 899999999999877641 1688999863 33221 1111 0 0 011234566778
Q ss_pred CCCcEEEEeC
Q 022227 80 TGVNIAVMVG 89 (300)
Q Consensus 80 ~~aDvVi~~a 89 (300)
++||+||++.
T Consensus 65 ~~aDvViiav 74 (307)
T PRK07502 65 KGADLVILCV 74 (307)
T ss_pred cCCCEEEECC
Confidence 9999999985
No 301
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0031 Score=56.13 Aligned_cols=120 Identities=12% Similarity=0.187 Sum_probs=66.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcc-cCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-C---CcccEEEeCC----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P---LLKGVVATTD---- 74 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~-~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~---~~~~v~~~~~---- 74 (300)
++++|.|+||+|.+|.+++..|+..+ . .|++.+++++ ..++....++..... . ...++.-..+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~-------~V~~~~r~~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~ 78 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA-------RVVLAALPDD-PRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKV 78 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC-------eEEEEeCCcc-hhHHHHHHHHHhcCCCceEEEEecCCChHHHHHH
Confidence 45789999999999999999998764 3 6888887642 113333233322110 0 0001110111
Q ss_pred hhhhc--CCCcEEEEeCCCCCCCCC---cH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCc
Q 022227 75 AVEAC--TGVNIAVMVGGFPRKEGM---ER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 75 ~~~a~--~~aDvVi~~ag~~~~~g~---~r---~dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP 133 (300)
..+.. .+.|++|+.+|....... +. .+.+..|+... +.+.+.+.+... ..++++|.-
T Consensus 79 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~--~~iv~isS~ 147 (253)
T PRK07904 79 IDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF--GQIIAMSSV 147 (253)
T ss_pred HHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC--ceEEEEech
Confidence 11111 379999998887532111 11 13466666433 456677766543 356776653
No 302
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.37 E-value=0.0049 Score=53.90 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=77.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhh--------hhhhhhhccCCcccEEEeCChhh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV--------KMELVDAAFPLLKGVVATTDAVE 77 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~--------~~dl~~~~~~~~~~v~~~~~~~~ 77 (300)
+++.|+||+|.+|..++..|+..|. ++++.|.++. +..+.. ..|+.+... ...+ .....+
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~-~~~~~~~~~~~~~~~~D~~~~~~--~~~~--~~~~~~ 70 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ-------PVIVSYRTHY-PAIDGLRQAGAQCIQADFSTNAG--IMAF--IDELKQ 70 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCch-hHHHHHHHcCCEEEEcCCCCHHH--HHHH--HHHHHh
Confidence 5799999999999999999998775 6888887642 111100 111111100 0000 001112
Q ss_pred hcCCCcEEEEeCCCCCC--CC-CcH---HHHHHhhHHHHH----HHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCC
Q 022227 78 ACTGVNIAVMVGGFPRK--EG-MER---KDVMSKNVSIYK----AQASALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~--~g-~~r---~dl~~~N~~i~~----~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~ 147 (300)
.+...|++|+.||.... +. .+. .+.+..|+.... .+.+.+.+...+...+++++.... . .+
T Consensus 71 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~-------~--~~ 141 (236)
T PRK06483 71 HTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV-------E--KG 141 (236)
T ss_pred hCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh-------c--cC
Confidence 23458999999986421 11 122 234555655443 344444433211234666554221 1 12
Q ss_pred CCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 148 ~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.|....|+.++.--..+.+.+++++.
T Consensus 142 ~~~~~~Y~asKaal~~l~~~~a~e~~ 167 (236)
T PRK06483 142 SDKHIAYAASKAALDNMTLSFAAKLA 167 (236)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHC
Confidence 23223466676666777888888875
No 303
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.37 E-value=0.001 Score=61.84 Aligned_cols=75 Identities=28% Similarity=0.309 Sum_probs=50.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh----ccCCcccEEEeCChhhhcC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA----AFPLLKGVVATTDAVEACT 80 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~----~~~~~~~v~~~~~~~~a~~ 80 (300)
+|||+|+| +|.+|+.++..|+..|. +|.++|.++ ++++.....-.+. ......++..++++.++++
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~-------~V~~~~r~~--~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~ 73 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGV-------PVRLWARRP--EFAAALAAERENREYLPGVALPAELYPTADPEEALA 73 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHc
Confidence 57999999 79999999999998764 799999853 3333221110000 1111223556667778889
Q ss_pred CCcEEEEeC
Q 022227 81 GVNIAVMVG 89 (300)
Q Consensus 81 ~aDvVi~~a 89 (300)
++|+||++.
T Consensus 74 ~aD~Vi~~v 82 (328)
T PRK14618 74 GADFAVVAV 82 (328)
T ss_pred CCCEEEEEC
Confidence 999999873
No 304
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.37 E-value=0.0021 Score=60.79 Aligned_cols=103 Identities=13% Similarity=0.092 Sum_probs=63.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-cCCcccEEEeCChhhhcCCCc
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~~~~~~v~~~~~~~~a~~~aD 83 (300)
++||.|+| +|+||+.++..|++.+- .+|.+.|+.. +++..... ..+.. ....-++.-...+.+.+++.|
T Consensus 1 m~~ilviG-aG~Vg~~va~~la~~~d------~~V~iAdRs~--~~~~~i~~-~~~~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 1 MMKILVIG-AGGVGSVVAHKLAQNGD------GEVTIADRSK--EKCARIAE-LIGGKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CCcEEEEC-CchhHHHHHHHHHhCCC------ceEEEEeCCH--HHHHHHHh-hccccceeEEecccChHHHHHHHhcCC
Confidence 37999999 69999999999998763 2899999863 33332211 11100 001111112235678899999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~ 136 (300)
+||.++..+. + ..+++++.+.+ +-++-.|+-.+.
T Consensus 71 ~VIn~~p~~~------------~----~~i~ka~i~~g---v~yvDts~~~~~ 104 (389)
T COG1748 71 LVINAAPPFV------------D----LTILKACIKTG---VDYVDTSYYEEP 104 (389)
T ss_pred EEEEeCCchh------------h----HHHHHHHHHhC---CCEEEcccCCch
Confidence 9999974331 1 25666666664 336777765544
No 305
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.35 E-value=0.0068 Score=55.00 Aligned_cols=157 Identities=20% Similarity=0.205 Sum_probs=94.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-----cccEEEeCCh---
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----LKGVVATTDA--- 75 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-----~~~v~~~~~~--- 75 (300)
..+.|+||||+.-||.++|+.|+..|. .++|+... .++++-...++....... ..+++-..+.
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-------~l~lvar~--~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~ 81 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-------KLVLVARR--ARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF 81 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-------ceEEeehh--hhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence 456899999999999999999999886 46666653 244543434443322111 0111111111
Q ss_pred ----hhhcCCCcEEEEeCCCCCCCCC------cHHHHHHhh----HHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 76 ----VEACTGVNIAVMVGGFPRKEGM------ERKDVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 76 ----~~a~~~aDvVi~~ag~~~~~g~------~r~dl~~~N----~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
..-+.+.|+.|.-||..+..-. +...+++.| +-.++...+.+++.. +..|+++++....
T Consensus 82 ~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~--~GhIVvisSiaG~----- 154 (282)
T KOG1205|consen 82 VEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN--DGHIVVISSIAGK----- 154 (282)
T ss_pred HHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC--CCeEEEEeccccc-----
Confidence 2346789999999999872211 122345555 577888888888875 3467777765542
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
..+|..-+|+-++-.-..|-.-|..++.-....|+
T Consensus 155 ----~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~ 189 (282)
T KOG1205|consen 155 ----MPLPFRSIYSASKHALEGFFETLRQELIPLGTIII 189 (282)
T ss_pred ----cCCCcccccchHHHHHHHHHHHHHHHhhccCceEE
Confidence 13443346777666655666666666654444444
No 306
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.33 E-value=0.011 Score=52.68 Aligned_cols=151 Identities=11% Similarity=0.112 Sum_probs=80.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc----CCcccEEEeCC-----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTD----- 74 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~----~~~~~v~~~~~----- 74 (300)
+.+++.|+||++.||.+++..|++.|. .+++.+.. +.++++....++..... ....+++-..+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 78 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-------NIAFTYNS-NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELF 78 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCC-CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 457899999999999999999998875 67776543 23444433333322100 00011110001
Q ss_pred --hhhhcCCCcEEEEeCCCCCC-------C--CCcH---HHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEecCchhh
Q 022227 75 --AVEACTGVNIAVMVGGFPRK-------E--GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANT 136 (300)
Q Consensus 75 --~~~a~~~aDvVi~~ag~~~~-------~--g~~r---~dl~~~N~~----i~~~i~~~i~~~~~~~~~viv~sNP~~~ 136 (300)
..+.+...|++|+.||.... + ..+. ...+..|+. ..+.+.+.+++.. ...+|++|.....
T Consensus 79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~ 156 (260)
T PRK08416 79 KKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG--GGSIISLSSTGNL 156 (260)
T ss_pred HHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC--CEEEEEEeccccc
Confidence 11223468999999975311 1 0111 122334433 3445555555432 2467777654321
Q ss_pred HHHHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 137 ~~~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|....++.++.-...+...+++++.
T Consensus 157 ---------~~~~~~~~Y~asK~a~~~~~~~la~el~ 184 (260)
T PRK08416 157 ---------VYIENYAGHGTSKAAVETMVKYAATELG 184 (260)
T ss_pred ---------cCCCCcccchhhHHHHHHHHHHHHHHhh
Confidence 1122222467777777788888888875
No 307
>PRK05855 short chain dehydrogenase; Validated
Probab=97.32 E-value=0.0027 Score=62.80 Aligned_cols=151 Identities=15% Similarity=0.045 Sum_probs=81.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChh----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAV---- 76 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~---- 76 (300)
+.+++.|+||+|.+|.+++..|+..|. +|++.+++. ++++....++..... ....+++-.....
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~ 384 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-------EVVASDIDE--AAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAE 384 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 446899999999999999999998875 788998863 344333333321100 0000110000111
Q ss_pred ---hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHH----HHhhhcCCCeEEEEecCchhhHHHHHHH
Q 022227 77 ---EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 77 ---~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~----~i~~~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
+.+...|++|+.||..... ..+. ...+..|+.....+.+ .+.+.+. ...+|++|+-...
T Consensus 385 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~------- 456 (582)
T PRK05855 385 WVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT-GGHIVNVASAAAY------- 456 (582)
T ss_pred HHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEECChhhc-------
Confidence 1223579999999985421 1122 2345677655555444 4444432 2457777653321
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|....++.++.-...+...++.++.
T Consensus 457 --~~~~~~~~Y~~sKaa~~~~~~~l~~e~~ 484 (582)
T PRK05855 457 --APSRSLPAYATSKAAVLMLSECLRAELA 484 (582)
T ss_pred --cCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 1222222455555555556666666654
No 308
>PRK08324 short chain dehydrogenase; Validated
Probab=97.31 E-value=0.0016 Score=66.63 Aligned_cols=150 Identities=20% Similarity=0.179 Sum_probs=78.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh--ccCCcccEEEeCChhhh----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--AFPLLKGVVATTDAVEA---- 78 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~--~~~~~~~v~~~~~~~~a---- 78 (300)
.++|.|+||+|+||+.++..|+..|. +|+++|++. +.++....++... ......++.-..+..++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga-------~Vvl~~r~~--~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~ 492 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGA-------CVVLADLDE--EAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEA 492 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEeCCH--HHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHH
Confidence 36899999999999999999998774 799999864 3333222222210 00000011000111122
Q ss_pred ---cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecCchhhHHHHHHHHC
Q 022227 79 ---CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 79 ---~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
+.+.|+||++||..... ..+. ...+..|......+. +.+++... +..+|++|+-...
T Consensus 493 ~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-~g~iV~vsS~~~~--------- 562 (681)
T PRK08324 493 ALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL-GGSIVFIASKNAV--------- 562 (681)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CcEEEEECCcccc---------
Confidence 23689999999865321 1122 223556666555554 44444322 2456766653221
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|....++.++.....+.+.++..++
T Consensus 563 ~~~~~~~~Y~asKaa~~~l~~~la~e~~ 590 (681)
T PRK08324 563 NPGPNFGAYGAAKAAELHLVRQLALELG 590 (681)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 0112112344455555556666666664
No 309
>PRK07680 late competence protein ComER; Validated
Probab=97.31 E-value=0.003 Score=57.11 Aligned_cols=100 Identities=13% Similarity=0.215 Sum_probs=61.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+| +|.+|..++..|...+.+. +.++.++|+++ ++++. +.+.. ..+....+..+.++++|+|
T Consensus 1 m~I~iIG-~G~mG~ala~~L~~~g~~~---~~~v~v~~r~~--~~~~~----~~~~~----~g~~~~~~~~~~~~~aDiV 66 (273)
T PRK07680 1 MNIGFIG-TGNMGTILIEAFLESGAVK---PSQLTITNRTP--AKAYH----IKERY----PGIHVAKTIEEVISQSDLI 66 (273)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCH--HHHHH----HHHHc----CCeEEECCHHHHHHhCCEE
Confidence 4899999 7999999999998876421 12688898853 33322 11110 1233445667778999999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
|++.- | ..+.++++.+..+-.++..+|-++|.+.
T Consensus 67 ilav~-p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 67 FICVK-P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred EEecC-H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 99851 1 1123344444443323446777788663
No 310
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.30 E-value=0.0018 Score=58.57 Aligned_cols=161 Identities=14% Similarity=0.144 Sum_probs=82.8
Q ss_pred CCCCCcEEEEEcCC--ChHHHHHHHHHHhcccCCCCCCeEEEEEecCCc-hhhhhhhhhhhhhhccCCcccEEEeCC---
Q 022227 1 MAKEPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFPLLKGVVATTD--- 74 (300)
Q Consensus 1 m~~~~~kV~IiGAa--G~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~-~~~l~g~~~dl~~~~~~~~~~v~~~~~--- 74 (300)
|.++.+.+.||||+ +-||..++..|++.|. .+++.|+++. .++++....++... .....++.-..+
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~-------~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~ 72 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGA-------ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKS 72 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHH
Confidence 66777899999976 6899999999998875 6888887521 11222111111100 000000000000
Q ss_pred ----hhhhcCCCcEEEEeCCCCCC-----C--CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH
Q 022227 75 ----AVEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (300)
Q Consensus 75 ----~~~a~~~aDvVi~~ag~~~~-----~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~ 140 (300)
..+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+...-.++..+|++|.-...
T Consensus 73 ~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~---- 148 (274)
T PRK08415 73 LAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV---- 148 (274)
T ss_pred HHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc----
Confidence 11223567999999997421 1 2232 2346667555444444333321122356666642210
Q ss_pred HHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 141 ~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...|....|+.++--...+.+.+|.++. +..|+
T Consensus 149 -----~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 181 (274)
T PRK08415 149 -----KYVPHYNVMGVAKAALESSVRYLAVDLG--KKGIR 181 (274)
T ss_pred -----cCCCcchhhhhHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1122222355666666667777787764 34454
No 311
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.30 E-value=0.0037 Score=54.95 Aligned_cols=151 Identities=17% Similarity=0.082 Sum_probs=76.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC---cccEEEeCChhh-----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVE----- 77 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~---~~~v~~~~~~~~----- 77 (300)
++|.|+||+|++|+.++..|++.|. ++++.+.+. .+.++....++....... ..++.-..+..+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-------SVGINYARD-AAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAV 74 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHH
Confidence 5899999999999999999998774 566654321 233333322332211000 001110111111
Q ss_pred --hcCCCcEEEEeCCCCCC--C--CCcHH---HHHHhhHHHHHHHHH----HHhhhcC-CCeEEEEecCchhhHHHHHHH
Q 022227 78 --ACTGVNIAVMVGGFPRK--E--GMERK---DVMSKNVSIYKAQAS----ALEQHAA-PNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 78 --a~~~aDvVi~~ag~~~~--~--g~~r~---dl~~~N~~i~~~i~~----~i~~~~~-~~~~viv~sNP~~~~~~~~~~ 143 (300)
.+...|++|++||.... + ..+.. ..+..|......+++ .+....+ +..++|++++....
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~------- 147 (248)
T PRK06947 75 QSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR------- 147 (248)
T ss_pred HHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-------
Confidence 13468999999986421 1 12222 235566655444443 3322211 12357777754321
Q ss_pred HCCCCCCC-cEEeeehhhHHHHHHHHHHHcC
Q 022227 144 FAPSIPAK-NITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 144 ~~~~~p~~-~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.+.. ..++.++.-...+...+++++.
T Consensus 148 --~~~~~~~~~Y~~sK~~~~~~~~~la~~~~ 176 (248)
T PRK06947 148 --LGSPNEYVDYAGSKGAVDTLTLGLAKELG 176 (248)
T ss_pred --CCCCCCCcccHhhHHHHHHHHHHHHHHhh
Confidence 111211 2356666665666677777664
No 312
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.30 E-value=0.0069 Score=53.39 Aligned_cols=149 Identities=18% Similarity=0.191 Sum_probs=76.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh-----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE----- 77 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~----- 77 (300)
++++|+||+|.+|.+++..|++.|. ++++++.++ +.++....++...... ...++.-..+..+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 71 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-------AVAVADLNE--ETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQA 71 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3689999999999999999998874 688888753 3333222222211100 0001100001111
Q ss_pred --hcCCCcEEEEeCCCCCC-C--CCcHH---HHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHC
Q 022227 78 --ACTGVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 78 --a~~~aDvVi~~ag~~~~-~--g~~r~---dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
.+...|+||+++|.... + +.+.. ..+..|+... +.+.+.+++... ..+++++|.-...
T Consensus 72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~--------- 141 (254)
T TIGR02415 72 AEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH-GGKIINAASIAGH--------- 141 (254)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-CeEEEEecchhhc---------
Confidence 13357999999987431 1 22222 3355665433 344455555433 2356655532211
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.+.|...-++.++.-...+...+++++.
T Consensus 142 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~ 169 (254)
T TIGR02415 142 EGNPILSAYSSTKFAVRGLTQTAAQELA 169 (254)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 1222222345555555556666666654
No 313
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.29 E-value=0.0017 Score=59.04 Aligned_cols=65 Identities=14% Similarity=0.126 Sum_probs=43.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+| .|.+|.+++..|...|. +|.++|.++ +.++. ..+. ... . ...++ .+++++||+|
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~-------~V~~~d~~~--~~~~~-a~~~--g~~----~-~~~~~-~~~~~~aDlV 61 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGH-------TVYGVSRRE--STCER-AIER--GLV----D-EASTD-LSLLKDCDLV 61 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHH-HHHC--CCc----c-cccCC-HhHhcCCCEE
Confidence 4899999 89999999999988764 799999863 33221 1111 000 0 11223 3568999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 62 ilav 65 (279)
T PRK07417 62 ILAL 65 (279)
T ss_pred EEcC
Confidence 9984
No 314
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.28 E-value=0.0017 Score=60.12 Aligned_cols=140 Identities=12% Similarity=0.142 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhcccCCCCCCeEEEEEecCCch--------hhhhhhhhhhhhhc-----c------CCcccEEEeCC--h
Q 022227 17 IGYALVPMIARGVMLGTDQPVILHMLDIPPAA--------EALNGVKMELVDAA-----F------PLLKGVVATTD--A 75 (300)
Q Consensus 17 vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~--------~~l~g~~~dl~~~~-----~------~~~~~v~~~~~--~ 75 (300)
+|+.++..++..|+ +|+|+|.++.. ++.........+.. . ....+++.+++ .
T Consensus 1 MG~giA~~~a~~G~-------~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 73 (314)
T PRK08269 1 MGQGIALAFAFAGH-------DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVARDGA 73 (314)
T ss_pred CcHHHHHHHHhCCC-------eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeecCcch
Confidence 47788888888775 89999997521 11111111111100 0 11356776654 6
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhH-HHHHHHHC-C----C--
Q 022227 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN-ALILKEFA-P----S-- 147 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~-~~~~~~~~-~----~-- 147 (300)
++++++||+||.+. .++.++.+.+...+.+.+++++ |+.||.+... +.+..... + +
T Consensus 74 ~~a~~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~--ilaSntS~~~~~~la~~~~~p~r~~g~H 137 (314)
T PRK08269 74 ADALADADLVFEAV--------------PEVLDAKREALRWLGRHVDADA--IIASTTSTFLVTDLQRHVAHPERFLNAH 137 (314)
T ss_pred HHHhccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCc--EEEEccccCCHHHHHhhcCCcccEEEEe
Confidence 68899999999983 3456777788888999988775 4488876533 34433220 1 0
Q ss_pred --CCCCc-----EEe--eehhhHHHHHHHHHHHcCCCCCCe
Q 022227 148 --IPAKN-----ITC--LTRLDHNRALGQISEKLNVQVSDV 179 (300)
Q Consensus 148 --~p~~~-----i~~--~t~ld~~R~~~~la~~l~v~~~~V 179 (300)
.|+.. +.. .|.-++......+.+.+|..|..+
T Consensus 138 f~~Pp~~~~lvEVv~g~~t~~e~~~~~~~ll~~lGk~~v~v 178 (314)
T PRK08269 138 WLNPAYLMPLVEVSPSDATDPAVVDRLAALLERIGKVPVVC 178 (314)
T ss_pred cCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 13321 222 355555444556667788666433
No 315
>PRK12743 oxidoreductase; Provisional
Probab=97.28 E-value=0.011 Score=52.53 Aligned_cols=150 Identities=11% Similarity=0.109 Sum_probs=76.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh-------
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA------- 75 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~------- 75 (300)
.+|.|+||+|.+|++++..|++.|. ++++.+... .+.++....++...... ...++.-..+.
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~-------~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF-------DIGITWHSD-EEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKL 74 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 5899999999999999999998875 676665432 22332222222211100 00011000011
Q ss_pred hhhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhh----cCCCeEEEEecCchhhHHHHHHHHC
Q 022227 76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQH----AAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~----~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
.+.+...|++|+.+|..... ..+. .+.+..|......+.+.+.++ .. ..++|++|+-...
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~g~ii~isS~~~~--------- 144 (256)
T PRK12743 75 IQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ-GGRIINITSVHEH--------- 144 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CeEEEEEeecccc---------
Confidence 11224579999999874321 1121 234566766666665544432 21 2467777653210
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...+..-.++.++.....+.+.+++++.
T Consensus 145 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~ 172 (256)
T PRK12743 145 TPLPGASAYTAAKHALGGLTKAMALELV 172 (256)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 1112122345555555556666666654
No 316
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.28 E-value=0.0044 Score=54.85 Aligned_cols=73 Identities=22% Similarity=0.185 Sum_probs=46.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
|+.+||+|+| +|.+|..++..|+..+... ..+++.++... .++++. +.+.. .+..+++..+.++++
T Consensus 2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~---~~~i~~~~~~~-~~~~~~----~~~~~-----~~~~~~~~~~~~~~~ 67 (245)
T PRK07634 2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEY---IEEIIVSNRSN-VEKLDQ----LQARY-----NVSTTTDWKQHVTSV 67 (245)
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHhCCCCC---cCeEEEECCCC-HHHHHH----HHHHc-----CcEEeCChHHHHhcC
Confidence 4568999999 7999999999988765211 11366676531 233332 22111 122345677788999
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||++.
T Consensus 68 DiViiav 74 (245)
T PRK07634 68 DTIVLAM 74 (245)
T ss_pred CEEEEec
Confidence 9999973
No 317
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.28 E-value=0.0031 Score=55.12 Aligned_cols=118 Identities=19% Similarity=0.136 Sum_probs=62.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCChhhh----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEA---- 78 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~~~~a---- 78 (300)
++++|+||+|++|++++..|++.|. .+++.+.++. +.++.....+..... ....++.-..+..++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-------~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 74 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-------RVIATYFSGN-DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEI 74 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCcH-HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4899999999999999999998764 6888887632 212111111110000 000011101111111
Q ss_pred ---cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEecCc
Q 022227 79 ---CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 79 ---~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i----~~~i~~~~~~~~~viv~sNP 133 (300)
+...|++|+.+|..... ..+. ...+..|+.....+ .+.+++.. ..++|++|+.
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~iss~ 140 (245)
T PRK12824 75 EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG--YGRIINISSV 140 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC--CeEEEEECCh
Confidence 33589999999865311 1122 23455676665555 44445443 2467777753
No 318
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0017 Score=57.64 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
+.++|.|+||+|++|.+++..|++.|. +++++|++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-------~v~~~~r~~ 41 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-------TVVVGDIDP 41 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH
Confidence 456899999999999999999998774 788898863
No 319
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0077 Score=52.94 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=64.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-----CcccEEEeCC------
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-----LLKGVVATTD------ 74 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-----~~~~v~~~~~------ 74 (300)
+++.||||+|.+|.+++..|++.|. .+++.++++ ++++....++...... ...++.-..+
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 73 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR-------DLALCARRT--DRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFA 73 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHH
Confidence 5799999999999999999998764 688888753 3343333333221100 0001100001
Q ss_pred -hhhhcCCCcEEEEeCCCCCCCCC---c---HHHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEecC
Q 022227 75 -AVEACTGVNIAVMVGGFPRKEGM---E---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN 132 (300)
Q Consensus 75 -~~~a~~~aDvVi~~ag~~~~~g~---~---r~dl~~~N~~i~~~i~~~i----~~~~~~~~~viv~sN 132 (300)
..+.+...|++|+.||....... + -...+..|+.....+.+.+ ++... .++|++|+
T Consensus 74 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~sS 140 (248)
T PRK08251 74 EFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS--GHLVLISS 140 (248)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CeEEEEec
Confidence 12234578999999987532211 1 1234566766555555544 34332 25666664
No 320
>PRK06484 short chain dehydrogenase; Validated
Probab=97.26 E-value=0.0024 Score=62.85 Aligned_cols=123 Identities=20% Similarity=0.127 Sum_probs=66.8
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCC------
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------ 74 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~------ 74 (300)
|+.+.+.+.||||++.+|..++..|++.|. .|++++.+. ++++....++.........++.-..+
T Consensus 1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (520)
T PRK06484 1 SKAQSRVVLVTGAAGGIGRAACQRFARAGD-------QVVVADRNV--ERARERADSLGPDHHALAMDVSDEAQIREGFE 71 (520)
T ss_pred CCCCCeEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEeccCCHHHHHHHHH
Confidence 445567899999999999999999998874 688888753 33332222221100000001100001
Q ss_pred -hhhhcCCCcEEEEeCCCCC---CC--CCcH---HHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEecCc
Q 022227 75 -AVEACTGVNIAVMVGGFPR---KE--GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 75 -~~~a~~~aDvVi~~ag~~~---~~--g~~r---~dl~~~N~~i~~~i~----~~i~~~~~~~~~viv~sNP 133 (300)
..+.+...|++|+.||... .+ ..+. ...+..|+.....+. +.+.+... ...+|++++-
T Consensus 72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~~iv~isS~ 142 (520)
T PRK06484 72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH-GAAIVNVASG 142 (520)
T ss_pred HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCeEEEECCc
Confidence 1222356899999998721 11 1222 334566665444444 44433322 2367777754
No 321
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.0023 Score=58.78 Aligned_cols=158 Identities=17% Similarity=0.101 Sum_probs=81.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (300)
+.+++.||||+|.+|..++..|+..|. .+++.|... .+.++....++...... ...++.-..+..+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-------~Vv~~~~~~-~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~ 82 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-------TVVVNDVAS-ALDASDVLDEIRAAGAKAVAVAGDISQRATADELVA 82 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCc-hhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 457899999999999999999998874 688888743 22333222223211100 00011000011111
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHh----hhc-----CCCeEEEEecCchhhHHH
Q 022227 79 ----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHA-----APNCKVLVVANPANTNAL 139 (300)
Q Consensus 79 ----~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~----~~~-----~~~~~viv~sNP~~~~~~ 139 (300)
+...|++|+.||..+.. ..+. ...+..|+.....+.+.+. +.. .....+|++++....
T Consensus 83 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--- 159 (306)
T PRK07792 83 TAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL--- 159 (306)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc---
Confidence 34689999999986532 1222 2345667665555554432 211 011356666543321
Q ss_pred HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 140 ~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.+..-.|+.++.-...+...+++.+. +.+|+
T Consensus 160 ------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~ 192 (306)
T PRK07792 160 ------VGPVGQANYGAAKAGITALTLSAARALG--RYGVR 192 (306)
T ss_pred ------cCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1111111345555555566666666553 34455
No 322
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0022 Score=58.47 Aligned_cols=120 Identities=23% Similarity=0.206 Sum_probs=67.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCc--ccEEEeCCh------
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDA------ 75 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~--~~v~~~~~~------ 75 (300)
+.++++|+||+|.+|..++..|+..|. ++++.+.++ ++++....++........ .++.-..+.
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~ 78 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-------KLALVDLEE--AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEE 78 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHH
Confidence 346899999999999999999998875 788898853 444433333321100000 011000011
Q ss_pred -hhhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEecC
Q 022227 76 -VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVAN 132 (300)
Q Consensus 76 -~~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~-~~~~~viv~sN 132 (300)
.+.+...|+||+.||..... ..+. .+.+..|+.....+.+.+..+- .+...+|++|+
T Consensus 79 ~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 79 AVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred HHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 12235689999999974321 1122 2346677776666666554321 11235677664
No 323
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=97.22 E-value=0.0026 Score=58.67 Aligned_cols=124 Identities=20% Similarity=0.258 Sum_probs=71.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+| +|.||+.++..|.+.| - ++.++-+++..++++..-+.+.+....... ........+....+|+|
T Consensus 1 mkI~IlG-aGAvG~l~g~~L~~~g-~------~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~-~~~~~~~~~~~~~~Dlv 71 (307)
T COG1893 1 MKILILG-AGAIGSLLGARLAKAG-H------DVTLLVRSRRLEALKKKGLRIEDEGGNFTT-PVVAATDAEALGPADLV 71 (307)
T ss_pred CeEEEEC-CcHHHHHHHHHHHhCC-C------eEEEEecHHHHHHHHhCCeEEecCCCcccc-ccccccChhhcCCCCEE
Confidence 5999999 7999999999999876 1 455655542112332222222222210011 11222345667799999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-Eeeeh
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTR 158 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ 158 (300)
|++.- .. ...+..+.+..+.+++.+|+..-|=....- .+.+. +|.+++ .|.|.
T Consensus 72 iv~vK----a~------------q~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~---~~~~~il~G~~~ 125 (307)
T COG1893 72 IVTVK----AY------------QLEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKI---LPKETVLGGVTT 125 (307)
T ss_pred EEEec----cc------------cHHHHHHHhhhcCCCCcEEEEEeCCCcHHH-HHHHh---CCcceEEEEEee
Confidence 99841 11 123566677777766777888888776443 34443 354443 44443
No 324
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.22 E-value=0.0039 Score=55.55 Aligned_cols=153 Identities=16% Similarity=0.140 Sum_probs=76.5
Q ss_pred CCcEEEEEcC--CChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeC-------C
Q 022227 4 EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-------D 74 (300)
Q Consensus 4 ~~~kV~IiGA--aG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~-------~ 74 (300)
+.++++|||| ++-+|..++..|+..|. .|++.|++.+.+.++....++.........++.-.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~ 78 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-------EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADR 78 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-------EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHH
Confidence 4568999998 68999999999998875 688888653223232222222110000001111000 1
Q ss_pred hhhhcCCCcEEEEeCCCCCC-----C--CCcHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 75 AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~-----~--g~~r~---dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
..+.+...|++|+.||.... + ..+.. ..+..|+...-.+.+.+...=.+...+++++.. ..
T Consensus 79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~-~~-------- 149 (256)
T PRK07889 79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFD-AT-------- 149 (256)
T ss_pred HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeec-cc--------
Confidence 12234568999999987421 1 12222 235667654444443333221112345555421 10
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|.-..++.++.-...+.+.++.++.
T Consensus 150 -~~~~~~~~Y~asKaal~~l~~~la~el~ 177 (256)
T PRK07889 150 -VAWPAYDWMGVAKAALESTNRYLARDLG 177 (256)
T ss_pred -ccCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 1112111234555555667777777764
No 325
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0024 Score=58.84 Aligned_cols=166 Identities=10% Similarity=0.009 Sum_probs=86.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-Cc----ccEEEeCC----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LL----KGVVATTD---- 74 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~----~~v~~~~~---- 74 (300)
+.+++.||||++.||..++..|+..|. +|++.+++. ++++....++...... .. .++.-..+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~ 83 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-------EVILPVRNR--AKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAAL 83 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHH
Confidence 346899999999999999999998874 788888753 3443333333221100 00 00000001
Q ss_pred ---hhhhcCCCcEEEEeCCCCCCC--CC---cHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 75 ---AVEACTGVNIAVMVGGFPRKE--GM---ERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 75 ---~~~a~~~aDvVi~~ag~~~~~--g~---~r~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
..+.....|++|+.||....+ .. .-...+..|... ++.+.+.+++. ..++|++|+-.......-.
T Consensus 84 ~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~---~~riv~vsS~~~~~~~~~~ 160 (313)
T PRK05854 84 GEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG---RARVTSQSSIAARRGAINW 160 (313)
T ss_pred HHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC---CCCeEEEechhhcCCCcCc
Confidence 111234589999999874321 11 123345556544 44555555443 2356776653321100000
Q ss_pred H---HCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 143 E---FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 143 ~---~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
. ....++....++.+++-...+...+++++......|+.
T Consensus 161 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v 202 (313)
T PRK05854 161 DDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITS 202 (313)
T ss_pred ccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEE
Confidence 0 00012222346667777777777788765444445653
No 326
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.19 E-value=0.0043 Score=56.37 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=60.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||+|+| +|.+|+.++..|...+.+. +.++.+++.+. .++++. +.... ..+..+.+..++++++|+|
T Consensus 2 ~~I~iIG-~G~mG~ala~~L~~~g~~~---~~~V~~~~r~~-~~~~~~----l~~~~----~~~~~~~~~~e~~~~aDvV 68 (277)
T PRK06928 2 EKIGFIG-YGSMADMIATKLLETEVAT---PEEIILYSSSK-NEHFNQ----LYDKY----PTVELADNEAEIFTKCDHS 68 (277)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cccEEEEeCCc-HHHHHH----HHHHc----CCeEEeCCHHHHHhhCCEE
Confidence 5899999 7999999999998876321 12688888753 222221 11110 1223445666778999999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
|++.-. ..++++++.+..+-+++..+|.+.+-+.
T Consensus 69 ilavpp----------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~ 102 (277)
T PRK06928 69 FICVPP----------------LAVLPLLKDCAPVLTPDRHVVSIAAGVS 102 (277)
T ss_pred EEecCH----------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 987421 2233455555443333445666666543
No 327
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0099 Score=52.77 Aligned_cols=118 Identities=19% Similarity=0.162 Sum_probs=65.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC----CcccEEEeCC---hh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTD---AV 76 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~----~~~~v~~~~~---~~ 76 (300)
+.+++.|+||+|.+|..++..|+..|. +|++++.++ ++++....++...... ...++.-..+ ..
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-------HLHLVARDA--DALEALAADLRAAHGVDVAVHALDLSSPEAREQLA 76 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH
Confidence 557899999999999999999998775 688998753 3443322223221000 0001100001 11
Q ss_pred hhcCCCcEEEEeCCCCCC-C--CCcH---HHHHHhhHHHHH----HHHHHHhhhcCCCeEEEEecC
Q 022227 77 EACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYK----AQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~-~--g~~r---~dl~~~N~~i~~----~i~~~i~~~~~~~~~viv~sN 132 (300)
+.+...|++|+++|.... + ..+. ...+..|+.... .+.+.+.+.. ...++++|+
T Consensus 77 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~iss 140 (259)
T PRK06125 77 AEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG--SGVIVNVIG 140 (259)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CcEEEEecC
Confidence 234578999999987532 1 1122 233556655444 4444444442 235666664
No 328
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.18 E-value=0.005 Score=55.28 Aligned_cols=68 Identities=18% Similarity=0.266 Sum_probs=46.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEE-ecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~-D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
|||++|| .|.+|+.++..|+..++.. +.+++.+ |+++ ++++. +.+. .+...++..++++++|+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~---~~~i~v~~~r~~--~~~~~----~~~~------g~~~~~~~~e~~~~aDv 64 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVP---PSRISTADDSNP--ARRDV----FQSL------GVKTAASNTEVVKSSDV 64 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCC---cceEEEEeCCCH--HHHHH----HHHc------CCEEeCChHHHHhcCCE
Confidence 5899999 8999999999999876421 2367788 6643 33321 2111 22344566677899999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
||++.
T Consensus 65 Vil~v 69 (266)
T PLN02688 65 IILAV 69 (266)
T ss_pred EEEEE
Confidence 99985
No 329
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.17 E-value=0.0047 Score=55.08 Aligned_cols=154 Identities=14% Similarity=0.075 Sum_probs=78.4
Q ss_pred CCCcEEEEEcCC--ChHHHHHHHHHHhcccCCCCCCeEEEEEecCCch-hhhhhhhhhhhhhccCCcccEEEeCC-----
Q 022227 3 KEPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGVKMELVDAAFPLLKGVVATTD----- 74 (300)
Q Consensus 3 ~~~~kV~IiGAa--G~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~-~~l~g~~~dl~~~~~~~~~~v~~~~~----- 74 (300)
++.+.+.||||+ +-||..++..|++.|. .|++.|+++.. +.++....++.... ....++.-..+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~ 79 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGA-------ELAVTYLNDKARPYVEPLAEELDAPI-FLPLDVREPGQLEAVF 79 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCChhhHHHHHHHHHhhccce-EEecCcCCHHHHHHHH
Confidence 345678999976 4899999999998874 68888876321 11221111221100 00001100001
Q ss_pred --hhhhcCCCcEEEEeCCCCCC-----C--CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 75 --AVEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 75 --~~~a~~~aDvVi~~ag~~~~-----~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
..+.+...|++|+.||.... + ..+. .+.+..|+...-.+.+.+..+-.+...+++++.....
T Consensus 80 ~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~------ 153 (258)
T PRK07533 80 ARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE------ 153 (258)
T ss_pred HHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc------
Confidence 11223467999999987431 1 1222 3345667665555555443322122356666543210
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|....++.++--...+.+.++.+++
T Consensus 154 ---~~~~~~~~Y~asKaal~~l~~~la~el~ 181 (258)
T PRK07533 154 ---KVVENYNLMGPVKAALESSVRYLAAELG 181 (258)
T ss_pred ---cCCccchhhHHHHHHHHHHHHHHHHHhh
Confidence 0112112345555555666777777765
No 330
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.16 E-value=0.028 Score=49.86 Aligned_cols=157 Identities=13% Similarity=0.129 Sum_probs=79.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh-----
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA----- 75 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~----- 75 (300)
+.+++.|+||+|.+|..++..|+..|. .+++..... .+.++....++...... ...+++-..+.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-------~vvi~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~ 77 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-------KVVINYRSD-EEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQ 77 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHH
Confidence 457899999999999999999998874 566665532 22222222222211000 00011000011
Q ss_pred --hhhcCCCcEEEEeCCCCCCC---CCcHH---HHHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHHHHHHH
Q 022227 76 --VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (300)
Q Consensus 76 --~~a~~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~ 143 (300)
.+.+...|++|+.||..... ..+.. ..+..|+... +.+.+.+.+... ...+|++|.-..
T Consensus 78 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~-~g~iv~~sS~~~-------- 148 (261)
T PRK08936 78 TAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI-KGNIINMSSVHE-------- 148 (261)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEccccc--------
Confidence 11233579999999874321 11222 3356665433 445555555433 235666665211
Q ss_pred HCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 144 ~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
. ...|....++.++.-...+.+.+++.+. +..|+
T Consensus 149 ~-~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~ 182 (261)
T PRK08936 149 Q-IPWPLFVHYAASKGGVKLMTETLAMEYA--PKGIR 182 (261)
T ss_pred c-CCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence 1 1233223456665554555666666653 33454
No 331
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.15 E-value=0.015 Score=51.96 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=26.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEec
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI 44 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~ 44 (300)
..+.||||+|.+|.+++..|++.|. ++++.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~-------~V~~~~~ 33 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY-------RVVLHYH 33 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC-------eEEEEcC
Confidence 4689999999999999999998875 6777654
No 332
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.15 E-value=0.0038 Score=55.34 Aligned_cols=38 Identities=24% Similarity=0.178 Sum_probs=31.1
Q ss_pred CCCCCcEEEEEcCCC--hHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 1 MAKEPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 1 m~~~~~kV~IiGAaG--~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
|+.+.++|.|+||+| .+|..++..|+..|. ++++++..
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~-------~vi~~~r~ 40 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGI-------DIFFTYWS 40 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCC-------cEEEEcCC
Confidence 566667899999875 699999999998874 67888764
No 333
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0024 Score=55.47 Aligned_cols=115 Identities=20% Similarity=0.137 Sum_probs=63.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-CcccEEEeCChhh---hcC-
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVE---ACT- 80 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~~~v~~~~~~~~---a~~- 80 (300)
+++.|+||+|.+|++++..|+..|. +++++|.+. +.++. +...... ...++.-..+..+ .+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-------~v~~~~r~~--~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 68 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-------RVIATARDA--AALAA----LQALGAEALALDVADPASVAGLAWKLDG 68 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-------EEEEEECCH--HHHHH----HHhccceEEEecCCCHHHHHHHHHHhcC
Confidence 4799999999999999999988764 788888763 22221 1110000 0001111111111 133
Q ss_pred -CCcEEEEeCCCCCC---C--CCcH---HHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEecCc
Q 022227 81 -GVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANP 133 (300)
Q Consensus 81 -~aDvVi~~ag~~~~---~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~-~~~~viv~sNP 133 (300)
..|+||+++|.... + ..+. ...+..|+.....+.+.+.++-. ....++++++.
T Consensus 69 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~ 131 (222)
T PRK06953 69 EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSR 131 (222)
T ss_pred CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCc
Confidence 47999999987521 1 1122 33567787777777766654321 12345555543
No 334
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.03 Score=49.78 Aligned_cols=118 Identities=19% Similarity=0.173 Sum_probs=64.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-CcccEE--EeC--Ch----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVV--ATT--DA---- 75 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-~~~~v~--~~~--~~---- 75 (300)
.+.+.|+||+|.+|..++..|+..|. +|++.++++ ++++....++...... ....+. .+. +.
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 78 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGA-------SVAICGRDE--ERLASAEARLREKFPGARLLAARCDVLDEADVAAFA 78 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHH
Confidence 46899999999999999999998875 688898863 4444333333221000 000000 110 11
Q ss_pred ---hhhcCCCcEEEEeCCCCCCC---CCcHH---HHHHhh----HHHHHHHHHHHhhhcCCCeEEEEecCc
Q 022227 76 ---VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKN----VSIYKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 76 ---~~a~~~aDvVi~~ag~~~~~---g~~r~---dl~~~N----~~i~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
.+.+...|++|+.||..... ..+.. ..+..| ...++.+.+.+++.. ...++++|.-
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~ 147 (265)
T PRK07062 79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA--AASIVCVNSL 147 (265)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--CcEEEEeccc
Confidence 11234679999999875321 11221 223334 334555566665543 2356776653
No 335
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.12 E-value=0.0053 Score=55.68 Aligned_cols=69 Identities=19% Similarity=0.300 Sum_probs=46.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||++|| +|.+|++++..|++.+.+. +.++..+|+++ ++++. +.+.. .+...++..+.+++||+|
T Consensus 3 ~~IgfIG-~G~MG~aia~~L~~~g~~~---~~~I~v~~r~~--~~~~~----l~~~~-----g~~~~~~~~e~~~~aDiI 67 (272)
T PRK12491 3 KQIGFIG-CGNMGIAMIGGMINKNIVS---PDQIICSDLNV--SNLKN----ASDKY-----GITITTNNNEVANSADIL 67 (272)
T ss_pred CeEEEEC-ccHHHHHHHHHHHHCCCCC---CceEEEECCCH--HHHHH----HHHhc-----CcEEeCCcHHHHhhCCEE
Confidence 4899999 8999999999999877532 12688888753 33332 21110 123344666778999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 68 iLav 71 (272)
T PRK12491 68 ILSI 71 (272)
T ss_pred EEEe
Confidence 9984
No 336
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.11 E-value=0.0045 Score=55.62 Aligned_cols=69 Identities=22% Similarity=0.274 Sum_probs=46.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
++||+||| +|.+|..++..|.+.+. .+.++.++|.++ ++++. +.+.. .+....+..+.++++|+
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~----~~~~v~v~~r~~--~~~~~----~~~~~-----g~~~~~~~~~~~~~adv 65 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGV----PAKDIIVSDPSP--EKRAA----LAEEY-----GVRAATDNQEAAQEADV 65 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCC----CcceEEEEcCCH--HHHHH----HHHhc-----CCeecCChHHHHhcCCE
Confidence 46899999 79999999999987763 112688898853 33322 11110 12234456667889999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
||++.
T Consensus 66 Vil~v 70 (267)
T PRK11880 66 VVLAV 70 (267)
T ss_pred EEEEc
Confidence 99974
No 337
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0041 Score=63.00 Aligned_cols=148 Identities=14% Similarity=0.075 Sum_probs=77.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh---
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (300)
.++++|+||+|.+|..++..|+..|. +|++++.++ +.++....++...... ...++.-..+..++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 441 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-------TVFLVARNG--EALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD 441 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46899999999999999999998875 788998763 3443332233211100 00011101112222
Q ss_pred ----cCCCcEEEEeCCCCCCCC--------CcHHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 79 ----CTGVNIAVMVGGFPRKEG--------MERKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 79 ----~~~aDvVi~~ag~~~~~g--------~~r~dl~~~N~~i~~~i----~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
+...|++|+.||...... ++-...+..|+.....+ .+.+++.. ...+|++|+-...
T Consensus 442 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~------ 513 (657)
T PRK07201 442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR--FGHVVNVSSIGVQ------ 513 (657)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CCEEEEECChhhc------
Confidence 236899999998642111 11233456676655444 44444443 2357777653211
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHc
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l 172 (300)
.+.|....++.++.-...+...++..+
T Consensus 514 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~ 540 (657)
T PRK07201 514 ---TNAPRFSAYVASKAALDAFSDVAASET 540 (657)
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 112211224445544455555566554
No 338
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.10 E-value=0.0052 Score=53.61 Aligned_cols=117 Identities=17% Similarity=0.177 Sum_probs=60.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeC-------Chh
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-------DAV 76 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~-------~~~ 76 (300)
.+.|+||+|++|+.++..|+..|. +++++.... .+.++....++...... ...++.-.. ...
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY-------RVAANCGPN-EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVE 73 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHH
Confidence 578999999999999999998774 566666521 22222111112111000 000110000 112
Q ss_pred hhcCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHH----HHHHHhhhcCCCeEEEEecCc
Q 022227 77 EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~----i~~~i~~~~~~~~~viv~sNP 133 (300)
+.+...|+||+++|..... ..+ -.+.+..|...... +.+.+++.. ..+++++|..
T Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~iss~ 138 (242)
T TIGR01829 74 AELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG--WGRIINISSV 138 (242)
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcch
Confidence 2245689999999865321 111 23345667665444 444444443 2357777654
No 339
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.09 E-value=0.0049 Score=56.11 Aligned_cols=65 Identities=14% Similarity=0.257 Sum_probs=47.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||++|| .|.+|+.++..|+..|+ +++.+|+++ ++.. ..+...- .....+..++.+++|+|
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~-------~v~v~~r~~--~ka~---~~~~~~G------a~~a~s~~eaa~~aDvV 61 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGH-------EVTVYNRTP--EKAA---ELLAAAG------ATVAASPAEAAAEADVV 61 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCC-------EEEEEeCCh--hhhh---HHHHHcC------CcccCCHHHHHHhCCEE
Confidence 4899999 99999999999999986 899999874 3321 1122211 11233567899999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|.+-
T Consensus 62 itmv 65 (286)
T COG2084 62 ITML 65 (286)
T ss_pred EEec
Confidence 9974
No 340
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.04 E-value=0.006 Score=54.45 Aligned_cols=160 Identities=14% Similarity=0.168 Sum_probs=80.0
Q ss_pred CCCcEEEEEcCC--ChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCC---
Q 022227 3 KEPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTD--- 74 (300)
Q Consensus 3 ~~~~kV~IiGAa--G~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~--- 74 (300)
++.+.+.||||+ +-||..++..|++.|. ++++.+.+.+..+.+....++.+... ....++.-..+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~ 76 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGA-------ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEE 76 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHH
Confidence 455689999975 6899999999998875 67776543211111111111211100 00001100001
Q ss_pred ----hhhhcCCCcEEEEeCCCCCC-----C--CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHH
Q 022227 75 ----AVEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (300)
Q Consensus 75 ----~~~a~~~aDvVi~~ag~~~~-----~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~ 140 (300)
..+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+...-.+...+|+++.....
T Consensus 77 ~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~---- 152 (258)
T PRK07370 77 TFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV---- 152 (258)
T ss_pred HHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc----
Confidence 12223468999999987531 1 1122 2334556544433333332211112357777653321
Q ss_pred HHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 141 ~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.|..-.|+.++--...+.+.++.+++ +..|+
T Consensus 153 -----~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~ 185 (258)
T PRK07370 153 -----RAIPNYNVMGVAKAALEASVRYLAAELG--PKNIR 185 (258)
T ss_pred -----cCCcccchhhHHHHHHHHHHHHHHHHhC--cCCeE
Confidence 1223223456666666677888888875 44554
No 341
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.04 E-value=0.0035 Score=57.49 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=55.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+| .|.+|+.++..|...|. +|.++|+++ ++++.. .+....... ...+..+.++++|+|
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~-------~V~~~dr~~--~~~~~l----~~~g~~~~~---s~~~~~~~~~~~dvI 63 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGH-------DCVGYDHDQ--DAVKAM----KEDRTTGVA---NLRELSQRLSAPRVV 63 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHH----HHcCCcccC---CHHHHHhhcCCCCEE
Confidence 4899999 89999999999998764 788999863 333322 111100000 001223456789999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCc
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
|++. | . ..++++++.+....+++..+|..||.
T Consensus 64 i~~v--p---~-----------~~~~~v~~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 64 WVMV--P---H-----------GIVDAVLEELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred EEEc--C---c-----------hHHHHHHHHHHhhCCCCCEEEECCCC
Confidence 9973 1 1 12333444444444345567777765
No 342
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.053 Score=47.53 Aligned_cols=151 Identities=11% Similarity=-0.004 Sum_probs=79.9
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCC---
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD--- 74 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~--- 74 (300)
|+++.+.+.|+||++-+|..++..|++.|. .++++++++ ++++....++...... ...++.-..+
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~ 71 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGA-------TLILCDQDQ--SALKDTYEQCSALTDNVYSFQLKDFSQESIRH 71 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHH
Confidence 667778999999999999999999998875 788888753 4444332222211100 0000000001
Q ss_pred ----hhhhcC-CCcEEEEeCCCCCCC----CCcHHH---HHHhhH----HHHHHHHHHHhhhcCCCeEEEEecCchhhHH
Q 022227 75 ----AVEACT-GVNIAVMVGGFPRKE----GMERKD---VMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 75 ----~~~a~~-~aDvVi~~ag~~~~~----g~~r~d---l~~~N~----~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~ 138 (300)
..+.+. ..|++|+.||....+ ..+..+ .+..|. ...+...+.+.+... ...+|++|+-..
T Consensus 72 ~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~-~g~Iv~isS~~~--- 147 (227)
T PRK08862 72 LFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK-KGVIVNVISHDD--- 147 (227)
T ss_pred HHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CceEEEEecCCC---
Confidence 112234 689999998743211 112222 233343 334455566655432 245677764221
Q ss_pred HHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 139 ~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
.|..-.++.++--...+.+.++.++.
T Consensus 148 ---------~~~~~~Y~asKaal~~~~~~la~el~ 173 (227)
T PRK08862 148 ---------HQDLTGVESSNALVSGFTHSWAKELT 173 (227)
T ss_pred ---------CCCcchhHHHHHHHHHHHHHHHHHHh
Confidence 11111244454445566667777653
No 343
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.03 E-value=0.0046 Score=56.36 Aligned_cols=63 Identities=22% Similarity=0.314 Sum_probs=45.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEE
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi 86 (300)
||+||| .|.+|+.++..|+..|+ +|.++|+++ ++++. +.+.. ....++..+++++||+||
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~-------~V~~~dr~~--~~~~~----~~~~g------~~~~~~~~~~~~~aDivi 60 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGY-------QLHVTTIGP--EVADE----LLAAG------AVTAETARQVTEQADVIF 60 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHHH----HHHCC------CcccCCHHHHHhcCCEEE
Confidence 589999 89999999999998764 789999863 33321 11111 112346678899999999
Q ss_pred EeC
Q 022227 87 MVG 89 (300)
Q Consensus 87 ~~a 89 (300)
++.
T Consensus 61 ~~v 63 (291)
T TIGR01505 61 TMV 63 (291)
T ss_pred Eec
Confidence 984
No 344
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.02 E-value=0.008 Score=54.87 Aligned_cols=64 Identities=19% Similarity=0.298 Sum_probs=45.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||+|+| .|.+|+.++..|...|. ++.++|.++ ++++. +... .....++..++++++|+|
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~-------~v~~~d~~~--~~~~~----~~~~------g~~~~~~~~e~~~~~d~v 62 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGY-------SLVVYDRNP--EAVAE----VIAA------GAETASTAKAVAEQCDVI 62 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHHH----HHHC------CCeecCCHHHHHhcCCEE
Confidence 5899999 89999999999988764 688899863 33221 1111 122344667788999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 63 i~~v 66 (296)
T PRK11559 63 ITML 66 (296)
T ss_pred EEeC
Confidence 9984
No 345
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.02 E-value=0.0046 Score=56.42 Aligned_cols=77 Identities=22% Similarity=0.218 Sum_probs=53.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
..||+|+| +|.+|.++++.|...|. . +|.++|++ .++++..+.++.+.. +. ..+....+..++++++|+
T Consensus 127 ~k~vlIlG-aGGaaraia~aL~~~G~-~-----~I~I~nR~--~~ka~~la~~l~~~~-~~-~~~~~~~~~~~~~~~aDi 195 (284)
T PRK12549 127 LERVVQLG-AGGAGAAVAHALLTLGV-E-----RLTIFDVD--PARAAALADELNARF-PA-ARATAGSDLAAALAAADG 195 (284)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCC-C-----EEEEECCC--HHHHHHHHHHHHhhC-CC-eEEEeccchHhhhCCCCE
Confidence 46899999 79999999999998774 2 79999986 467776666664422 11 122222344567899999
Q ss_pred EEEe--CCCC
Q 022227 85 AVMV--GGFP 92 (300)
Q Consensus 85 Vi~~--ag~~ 92 (300)
||.+ +|..
T Consensus 196 VInaTp~Gm~ 205 (284)
T PRK12549 196 LVHATPTGMA 205 (284)
T ss_pred EEECCcCCCC
Confidence 9997 5654
No 346
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.01 E-value=0.0047 Score=58.23 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=44.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||+|+| +|.+|.+++..|...|+ ++.++|.+++...+. ... .. .... ...++..+++++||+|
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~~G~-------~v~i~~~~~~~~~~~-~a~---~~--~~~~--~~~~~~~~~~~~aDlV 64 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKAAGP-------DVFIIGYDPSAAQLA-RAL---GF--GVID--ELAADLQRAAAEADLI 64 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHhcCC-------CeEEEEeCCCHHHHH-HHh---cC--CCCc--ccccCHHHHhcCCCEE
Confidence 4799999 89999999999998764 567788764322111 111 00 0001 1234667788999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 65 ilav 68 (359)
T PRK06545 65 VLAV 68 (359)
T ss_pred EEeC
Confidence 9984
No 347
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0091 Score=53.11 Aligned_cols=155 Identities=15% Similarity=0.042 Sum_probs=79.4
Q ss_pred CcEEEEEcCCC-hHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCc----ccEEEeCChh--
Q 022227 5 PVRVLVTGAAG-QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLL----KGVVATTDAV-- 76 (300)
Q Consensus 5 ~~kV~IiGAaG-~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~----~~v~~~~~~~-- 76 (300)
.+++.|+||+| .+|..++..|+..|. +|++.|.+. ++++....++..... ... .++.-..+..
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-------~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 87 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGA-------RVVISDIHE--RRLGETADELAAELGLGRVEAVVCDVTSEAQVDAL 87 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHH
Confidence 46899999887 599999999998875 688888753 334333223322100 000 0110000111
Q ss_pred -----hhcCCCcEEEEeCCCCCCC---CCcH---HHHHHhhHHHHHHHHH----HHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 77 -----EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 77 -----~a~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~----~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
+.+...|++|++||..... ..+. .+.+..|+.....+.+ .+.+... ...+++++.....
T Consensus 88 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~ss~~~~----- 161 (262)
T PRK07831 88 IDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH-GGVIVNNASVLGW----- 161 (262)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEeCchhhc-----
Confidence 1124679999999864311 1111 2334556555444444 3333321 2345555442211
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...+....++.++.-...+.+.+|.++. +..|+
T Consensus 162 ----~~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~ 194 (262)
T PRK07831 162 ----RAQHGQAHYAAAKAGVMALTRCSALEAA--EYGVR 194 (262)
T ss_pred ----CCCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence 1122223456666666677777777654 34454
No 348
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.97 E-value=0.0083 Score=52.40 Aligned_cols=118 Identities=16% Similarity=0.139 Sum_probs=62.7
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh-------h
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV-------E 77 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~-------~ 77 (300)
|.|+||+|++|.+++..|++.|. ++++++... .++++....++.+.... ...++.-..+.. +
T Consensus 1 vlItGas~giG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF-------EICVHYHSG-RSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 57999999999999999998875 677776542 23333222223221100 000110000111 1
Q ss_pred hcCCCcEEEEeCCCCCCCC---Cc---HHHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEecCch
Q 022227 78 ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPA 134 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~~g---~~---r~dl~~~N~~i~~~i~~~i~----~~~~~~~~viv~sNP~ 134 (300)
.+...|.+|+.+|...... .+ -...+..|+.....+.+.+. +..+ ...+|++|+..
T Consensus 73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~ 138 (239)
T TIGR01831 73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVS 138 (239)
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchh
Confidence 2335699999998653221 12 23456677776666655431 2122 34677777644
No 349
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.96 E-value=0.0031 Score=51.49 Aligned_cols=120 Identities=14% Similarity=0.271 Sum_probs=67.9
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhh---hhhhhhc-cCCcccEEEeCChhhhcCCCc
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---MELVDAA-FPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~---~dl~~~~-~~~~~~v~~~~~~~~a~~~aD 83 (300)
|+|+| +|.+|..++..|.+.+. ++.|++..+ .++... ..+.+.. ..............+..+.+|
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~-------~V~l~~r~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 69 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGH-------DVTLVSRSP---RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYD 69 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTC-------EEEEEESHH---HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTES
T ss_pred CEEEC-cCHHHHHHHHHHHHCCC-------ceEEEEccc---cHHhhhheeEEEEecccceecccccccCcchhccCCCc
Confidence 78999 79999999999988664 799998752 222111 1111111 000111112222225678999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcE-Eeeeh
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTR 158 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i-~~~t~ 158 (300)
+||++.-.. -..+.++.++.+..++..++.+-|=....-.+ .+. +|+.++ .+.+.
T Consensus 70 ~viv~vKa~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~l-~~~---~~~~~v~~g~~~ 125 (151)
T PF02558_consen 70 LVIVAVKAY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEEVL-AEY---FPRPRVLGGVTT 125 (151)
T ss_dssp EEEE-SSGG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHHHH-HCH---STGSGEEEEEEE
T ss_pred EEEEEeccc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHHHH-HHH---cCCCcEEEEEEe
Confidence 999984111 11346666777776677788888877654333 333 354564 44444
No 350
>PRK08017 oxidoreductase; Provisional
Probab=96.95 E-value=0.0066 Score=53.57 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=28.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
++|.|+||+|++|.+++..|++.|. ++++++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-------~v~~~~r~ 35 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-------RVLAACRK 35 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCC
Confidence 4799999999999999999998764 67888775
No 351
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.95 E-value=0.019 Score=51.22 Aligned_cols=154 Identities=12% Similarity=0.090 Sum_probs=78.7
Q ss_pred CCcEEEEEcCC--ChHHHHHHHHHHhcccCCCCCCeEEEEEecCC-chhhhhhhhhhhhhhcc-CCcccEEEeC------
Q 022227 4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAF-PLLKGVVATT------ 73 (300)
Q Consensus 4 ~~~kV~IiGAa--G~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~-~~~~l~g~~~dl~~~~~-~~~~~v~~~~------ 73 (300)
+.+.++||||+ +-||..++..|++.|. ++++.+++. +.+.++....++..... ....++.-..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 78 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-------KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACF 78 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHH
Confidence 45689999976 7899999999998875 678876532 12223222222210000 0000110000
Q ss_pred -ChhhhcCCCcEEEEeCCCCCC-----C--CCcHHH---HHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 74 -DAVEACTGVNIAVMVGGFPRK-----E--GMERKD---VMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 74 -~~~~a~~~aDvVi~~ag~~~~-----~--g~~r~d---l~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
...+.+...|++|+.||.... + ..+..+ .+..|......+.+.+...-.+...+|++|+-...
T Consensus 79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~------ 152 (257)
T PRK08594 79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE------ 152 (257)
T ss_pred HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc------
Confidence 112224558999999986421 1 122222 24455554444443333321123467777753321
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|..-.|+.++.-...+.+.+|.++.
T Consensus 153 ---~~~~~~~~Y~asKaal~~l~~~la~el~ 180 (257)
T PRK08594 153 ---RVVQNYNVMGVAKASLEASVKYLANDLG 180 (257)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhh
Confidence 1122222456666666777777887774
No 352
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.94 E-value=0.015 Score=52.99 Aligned_cols=68 Identities=16% Similarity=0.357 Sum_probs=44.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh-hhhhhhhhhccCCcccEEEeCC-hhhhcCCC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFPLLKGVVATTD-AVEACTGV 82 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~-g~~~dl~~~~~~~~~~v~~~~~-~~~a~~~a 82 (300)
.++|+|+| .|.+|.+++..|...|+ .+..++.+.+.+.++ +..+++.+.. +.+ ..++.++|
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~-------~v~i~g~d~~~~~~~~a~~lgv~d~~---------~~~~~~~~~~~a 65 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGL-------VVRIIGRDRSAATLKAALELGVIDEL---------TVAGLAEAAAEA 65 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCC-------eEEEEeecCcHHHHHHHhhcCccccc---------ccchhhhhcccC
Confidence 46899999 89999999999998876 455666654332222 2223333321 122 26778899
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||++.
T Consensus 66 D~Vivav 72 (279)
T COG0287 66 DLVIVAV 72 (279)
T ss_pred CEEEEec
Confidence 9999973
No 353
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.93 E-value=0.0054 Score=56.24 Aligned_cols=64 Identities=22% Similarity=0.456 Sum_probs=46.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||+|+| .|.+|..++..|+..|. ++.++|+++ ++++. +... .....++..++++++|+|
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~-------~V~v~d~~~--~~~~~----~~~~------g~~~~~s~~~~~~~aDvV 61 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGH-------QLQVFDVNP--QAVDA----LVDK------GATPAASPAQAAAGAEFV 61 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHHH----HHHc------CCcccCCHHHHHhcCCEE
Confidence 4899999 89999999999998764 789999864 33332 2111 112334667889999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 62 i~~v 65 (296)
T PRK15461 62 ITML 65 (296)
T ss_pred EEec
Confidence 9874
No 354
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.03 Score=49.46 Aligned_cols=149 Identities=10% Similarity=0.028 Sum_probs=79.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhh-----
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE----- 77 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~----- 77 (300)
+++.|+||+|.+|.+++..|++.|. .|++.|.+. ++++....++...... ...++.-..+..+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA-------NVVITGRTK--EKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQI 72 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 5789999999999999999998875 688888763 3333333233211100 0001100001111
Q ss_pred --hcCCCcEEEEeCCCCCC-C--CCcH---HHHHHhhHHHHHHHHHHHhh----hcCCCeEEEEecCchhhHHHHHHHHC
Q 022227 78 --ACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEQ----HAAPNCKVLVVANPANTNALILKEFA 145 (300)
Q Consensus 78 --a~~~aDvVi~~ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~----~~~~~~~viv~sNP~~~~~~~~~~~~ 145 (300)
.+...|++|+.+|.... + ..+. ...+..|......+.+.+.+ ... ...++++|.-.. ..
T Consensus 73 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~ii~isS~~~-------~~- 143 (252)
T PRK07677 73 DEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI-KGNIINMVATYA-------WD- 143 (252)
T ss_pred HHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC-CEEEEEEcChhh-------cc-
Confidence 23467999999885321 1 2222 23466676655555555533 222 245676664321 00
Q ss_pred CCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 146 ~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
+ .+..-.++.++.....+.+.+|+.+.
T Consensus 144 ~-~~~~~~Y~~sKaa~~~~~~~la~e~~ 170 (252)
T PRK07677 144 A-GPGVIHSAAAKAGVLAMTRTLAVEWG 170 (252)
T ss_pred C-CCCCcchHHHHHHHHHHHHHHHHHhC
Confidence 1 11111345555555667777777764
No 355
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.91 E-value=0.0014 Score=52.41 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=53.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.+||.||| +|.+|.+++..|.+.|+ +|.-+-.. +.+..+ .+... .....+ .++.+.++++|+
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~ag~-------~v~~v~sr-s~~sa~----~a~~~----~~~~~~-~~~~~~~~~aDl 71 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARAGH-------EVVGVYSR-SPASAE----RAAAF----IGAGAI-LDLEEILRDADL 71 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHTTS-------EEEEESSC-HH-HHH----HHHC------TT------TTGGGCC-SE
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeC-Cccccc----ccccc----cccccc-cccccccccCCE
Confidence 58999999 79999999999998774 45444322 111111 11111 111112 245678899999
Q ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhh--cCCCeEEEEecC---chhhHHHH
Q 022227 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH--AAPNCKVLVVAN---PANTNALI 140 (300)
Q Consensus 85 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~--~~~~~~viv~sN---P~~~~~~~ 140 (300)
+|++. ++ ..+.++++.+..+ -.++ ++++-++ +++++..+
T Consensus 72 v~iav-----pD-----------daI~~va~~La~~~~~~~g-~iVvHtSGa~~~~vL~p~ 115 (127)
T PF10727_consen 72 VFIAV-----PD-----------DAIAEVAEQLAQYGAWRPG-QIVVHTSGALGSDVLAPA 115 (127)
T ss_dssp EEE-S------C-----------CHHHHHHHHHHCC--S-TT--EEEES-SS--GGGGHHH
T ss_pred EEEEe-----ch-----------HHHHHHHHHHHHhccCCCC-cEEEECCCCChHHhhhhH
Confidence 99984 22 1234677777765 2234 4666654 35566554
No 356
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.91 E-value=0.015 Score=56.87 Aligned_cols=100 Identities=12% Similarity=-0.024 Sum_probs=61.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC---CC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---GV 82 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~---~a 82 (300)
.+|+|+| .|.+|++++..|+..|. +|.++|+++ ++.+. +.+........+....++.+.++ ++
T Consensus 2 ~~IgvIG-LG~MG~~lA~nL~~~G~-------~V~v~dr~~--~~~~~----l~~~~~~~g~~i~~~~s~~e~v~~l~~~ 67 (470)
T PTZ00142 2 SDIGLIG-LAVMGQNLALNIASRGF-------KISVYNRTY--EKTEE----FVKKAKEGNTRVKGYHTLEELVNSLKKP 67 (470)
T ss_pred CEEEEEe-EhHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHH----HHHhhhhcCCcceecCCHHHHHhcCCCC
Confidence 4899999 89999999999998875 799999864 43332 22110000112334556666665 58
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCch
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~ 134 (300)
|+||++.-. .+.++++++.+..+-.++.++|..+|..
T Consensus 68 d~Iil~v~~---------------~~~v~~vi~~l~~~L~~g~iIID~gn~~ 104 (470)
T PTZ00142 68 RKVILLIKA---------------GEAVDETIDNLLPLLEKGDIIIDGGNEW 104 (470)
T ss_pred CEEEEEeCC---------------hHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 988887411 1233344444444433455678888753
No 357
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.90 E-value=0.011 Score=53.00 Aligned_cols=159 Identities=19% Similarity=0.191 Sum_probs=80.8
Q ss_pred CCC-CCcEEEEEcCCC--hHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEeCC
Q 022227 1 MAK-EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTD 74 (300)
Q Consensus 1 m~~-~~~kV~IiGAaG--~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~~~ 74 (300)
|.+ +.+.+.||||++ -||..++..|++.|. .|++.+.+. +++....++..... ....++.-..+
T Consensus 1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~-------~vil~~r~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 70 (262)
T PRK07984 1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQND---KLKGRVEEFAAQLGSDIVLPCDVAEDAS 70 (262)
T ss_pred CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCC-------EEEEEecch---hHHHHHHHHHhccCCceEeecCCCCHHH
Confidence 443 346789999764 799999999998875 688887642 22212222221100 00011110001
Q ss_pred h-------hhhcCCCcEEEEeCCCCCCC--------CCcHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhh
Q 022227 75 A-------VEACTGVNIAVMVGGFPRKE--------GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (300)
Q Consensus 75 ~-------~~a~~~aDvVi~~ag~~~~~--------g~~r~---dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~ 136 (300)
. .+.+...|++|+.||..... ..+.. ..+..|+.....+.+.+...-.++..++++|+-...
T Consensus 71 v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~ 150 (262)
T PRK07984 71 IDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE 150 (262)
T ss_pred HHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC
Confidence 1 11234579999999864211 11222 234556654444444433221122456776643210
Q ss_pred HHHHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 137 ~~~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...|....|+.++--...+.+.+|.++. +.+|+
T Consensus 151 ---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 183 (262)
T PRK07984 151 ---------RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVR 183 (262)
T ss_pred ---------CCCCCcchhHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence 1123222456666666777888888764 34455
No 358
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.89 E-value=0.0096 Score=52.87 Aligned_cols=154 Identities=14% Similarity=0.131 Sum_probs=77.6
Q ss_pred CCC--CCcEEEEEcCC--ChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCcccEEEeCC-
Q 022227 1 MAK--EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTD- 74 (300)
Q Consensus 1 m~~--~~~kV~IiGAa--G~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~~~v~~~~~- 74 (300)
|++ +.+.+.||||+ +-||..++..|++.|. +|++.+.++ ++.....++..... ....++.-..+
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~-------~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v 70 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGA-------TVIYTYQND---RMKKSLQKLVDEEDLLVECDVASDESI 70 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEecCch---HHHHHHHhhccCceeEEeCCCCCHHHH
Confidence 554 45689999987 6899999999998875 688887652 22211111111000 00011110001
Q ss_pred ------hhhhcCCCcEEEEeCCCCCC-----C--CCcHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH
Q 022227 75 ------AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 75 ------~~~a~~~aDvVi~~ag~~~~-----~--g~~r~---dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~ 138 (300)
..+.+...|++|+.||.... + ..+.. ..+..|+.....+.+.+.+.-.+...+++++.-...
T Consensus 71 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-- 148 (252)
T PRK06079 71 ERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE-- 148 (252)
T ss_pred HHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc--
Confidence 11223457999999987431 1 12222 234456544444443333321122356676642210
Q ss_pred HHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcC
Q 022227 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (300)
Q Consensus 139 ~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~ 173 (300)
...|....++.++--...+.+.+|.++.
T Consensus 149 -------~~~~~~~~Y~asKaal~~l~~~la~el~ 176 (252)
T PRK06079 149 -------RAIPNYNVMGIAKAALESSVRYLARDLG 176 (252)
T ss_pred -------ccCCcchhhHHHHHHHHHHHHHHHHHhh
Confidence 1122222355566666677777777764
No 359
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0098 Score=53.99 Aligned_cols=35 Identities=34% Similarity=0.304 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
+.+.+.||||++.||..++..|+..|. .+++.|.+
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~-------~vii~~~~ 39 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIG 39 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeeCC
Confidence 456899999999999999999998774 67888764
No 360
>PRK05599 hypothetical protein; Provisional
Probab=96.88 E-value=0.036 Score=48.95 Aligned_cols=153 Identities=14% Similarity=0.193 Sum_probs=82.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC----CcccEEEeC-------C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATT-------D 74 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~----~~~~v~~~~-------~ 74 (300)
|.+.|+||++.+|..++..|.+ |. .+++.+.++ ++++....++...... ...++.-.. .
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 70 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE-------DVVLAARRP--EAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ 70 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence 3689999999999999999884 53 688888753 5555444444322100 000110000 1
Q ss_pred hhhhcCCCcEEEEeCCCCCCCC---CcH---HHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 75 AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~~g---~~r---~dl~~~N~~----i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
..+.+...|++|+.||...... .+. .+....|.. ..+.+.+.+.+... +..+|++|+-...
T Consensus 71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-~g~Iv~isS~~~~-------- 141 (246)
T PRK05599 71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA-PAAIVAFSSIAGW-------- 141 (246)
T ss_pred HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC-CCEEEEEeccccc--------
Confidence 1222346899999998753211 111 123333433 33444565654432 2467777764431
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.|..-.|+.++--...+.+.++++++ ..+|+
T Consensus 142 -~~~~~~~~Y~asKaa~~~~~~~la~el~--~~~I~ 174 (246)
T PRK05599 142 -RARRANYVYGSTKAGLDAFCQGLADSLH--GSHVR 174 (246)
T ss_pred -cCCcCCcchhhHHHHHHHHHHHHHHHhc--CCCce
Confidence 1122223466677666677778888774 33454
No 361
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0049 Score=55.60 Aligned_cols=116 Identities=19% Similarity=0.185 Sum_probs=62.0
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChhhh-----
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA----- 78 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~~a----- 78 (300)
.+.|+| +|.+|.+++..|. .|. +|++.|+++ ++++....++...... ...++.-..+..++
T Consensus 4 ~~lItG-a~gIG~~la~~l~-~G~-------~Vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~ 72 (275)
T PRK06940 4 VVVVIG-AGGIGQAIARRVG-AGK-------KVLLADYNE--ENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQ 72 (275)
T ss_pred EEEEEC-CChHHHHHHHHHh-CCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHH
Confidence 567788 5899999999986 553 789998853 3333222223211000 00011000011111
Q ss_pred -cCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCch
Q 022227 79 -CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (300)
Q Consensus 79 -~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~ 134 (300)
+...|++|+.||... ...+-.+.+..|+.....+.+.+.+.-.++..++++++.+
T Consensus 73 ~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 73 TLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred hcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 246899999999753 2223455677887776666666554311122345555443
No 362
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.85 E-value=0.011 Score=48.44 Aligned_cols=121 Identities=19% Similarity=0.185 Sum_probs=69.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc---CCcccEEEe-------CChh
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVAT-------TDAV 76 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~---~~~~~v~~~-------~~~~ 76 (300)
.++|+||++.+|..++..|++.|- ..+++++.+++.+.++....++..... ....++.-. ....
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeecccccccccccccccccccccccccccccccccccccccccc
Confidence 588999999999999999998742 167888775222333333233331110 000000000 0112
Q ss_pred hhcCCCcEEEEeCCCCCCCCC---cH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 77 EACTGVNIAVMVGGFPRKEGM---ER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~~g~---~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
+.....|++|+++|....... +. .+.+..|+.....+.+.+.. .. ...++++|....
T Consensus 76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~-~g~iv~~sS~~~ 138 (167)
T PF00106_consen 76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QG-GGKIVNISSIAG 138 (167)
T ss_dssp HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HT-TEEEEEEEEGGG
T ss_pred cccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-cc-ccceEEecchhh
Confidence 234578999999998652211 11 24566777777777777776 33 457888876554
No 363
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.85 E-value=0.0085 Score=55.88 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=45.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.+|+.++..|...|. +|..+|..+. ... +. . ....++.+++++||
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~-------~V~~~d~~~~--~~~----~~---~-------~~~~~l~ell~~aD 200 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYAGFGA-------TITAYDAYPN--KDL----DF---L-------TYKDSVKEAIKDAD 200 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEeCChh--Hhh----hh---h-------hccCCHHHHHhcCC
Confidence 346999999 89999999999886554 7999998631 110 11 0 12346788999999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|+++.
T Consensus 201 iVil~l 206 (330)
T PRK12480 201 IISLHV 206 (330)
T ss_pred EEEEeC
Confidence 999874
No 364
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=96.83 E-value=0.027 Score=51.96 Aligned_cols=106 Identities=25% Similarity=0.421 Sum_probs=63.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhccc-CCCCCCeEEEEEecCCchhhhhh---hhhhhh---hhc---cC---CcccE
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVM-LGTDQPVILHMLDIPPAAEALNG---VKMELV---DAA---FP---LLKGV 69 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~-~~~~~~~~l~L~D~~~~~~~l~g---~~~dl~---~~~---~~---~~~~v 69 (300)
+.+.||+|+| +|+=|++++..+...-. +. ....+|++.-.. +...+ ...|+- |.. .| +..++
T Consensus 19 ~~~~kV~ivG-sGnWGsaiaki~~~n~~~~~-~f~~~Vrmwv~e---e~i~~~~~~L~eiIN~~heN~KYlpg~~lP~Nv 93 (372)
T KOG2711|consen 19 RDPLKVCIVG-SGNWGSAIAKIVGENVKEFP-IFDPQVRMWVFE---EEINGEAEKLTEIINSRHENVKYLPGIKLPENV 93 (372)
T ss_pred cCceEEEEEc-cChHHHHHHHHHhhhhhhcc-ccCceeeEEEec---cccCChhHHHHHHhccccccccccCCccCCCCe
Confidence 4568999999 89999999987764311 11 011134443321 22222 112221 111 12 34678
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEE
Q 022227 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLV 129 (300)
Q Consensus 70 ~~~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv 129 (300)
...+|+.++++|||++|+.- |. ..+.++++.|..+-+|++..|-
T Consensus 94 vAv~dl~ea~~dADilvf~v--Ph--------------Qf~~~ic~~l~g~vk~~~~aIS 137 (372)
T KOG2711|consen 94 VAVPDLVEAAKDADILVFVV--PH--------------QFIPRICEQLKGYVKPGATAIS 137 (372)
T ss_pred EecchHHHHhccCCEEEEeC--Ch--------------hhHHHHHHHHhcccCCCCeEEE
Confidence 88999999999999999972 31 3345677777777666654443
No 365
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.81 E-value=0.0044 Score=54.58 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=29.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
|+++|+| +|.+|++++..|...|. +++++|.++
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~-------~Vv~Id~d~ 33 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGH-------NVVLIDRDE 33 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCC-------ceEEEEcCH
Confidence 5899999 79999999999998874 799999974
No 366
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.78 E-value=0.016 Score=52.51 Aligned_cols=66 Identities=12% Similarity=0.118 Sum_probs=41.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+| .|.+|.+++..|...|.. .++..+|.++ ++++. +.+... +....+..+ +.++|+|
T Consensus 1 m~I~iIG-~G~mG~sla~~l~~~g~~-----~~v~~~d~~~--~~~~~----~~~~g~-----~~~~~~~~~-~~~aD~V 62 (275)
T PRK08507 1 MKIGIIG-LGLMGGSLGLALKEKGLI-----SKVYGYDHNE--LHLKK----ALELGL-----VDEIVSFEE-LKKCDVI 62 (275)
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCC-----CEEEEEcCCH--HHHHH----HHHCCC-----CcccCCHHH-HhcCCEE
Confidence 4899999 799999999999887641 2688888863 33221 111110 001123444 4569999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 63 ilav 66 (275)
T PRK08507 63 FLAI 66 (275)
T ss_pred EEeC
Confidence 9984
No 367
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.016 Score=52.27 Aligned_cols=157 Identities=15% Similarity=0.143 Sum_probs=82.3
Q ss_pred CcEEEEEcCC--ChHHHHHHHHHHhcccCCCCCCeEEEEEecCC-chhhhhhhhhhhhhhccCCcccEEEeCC-------
Q 022227 5 PVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAFPLLKGVVATTD------- 74 (300)
Q Consensus 5 ~~kV~IiGAa--G~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~-~~~~l~g~~~dl~~~~~~~~~~v~~~~~------- 74 (300)
.+++.|+||+ +-||..++..|+..|. .|++.+.++ ..++++....++.... ....++.-..+
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~-------~V~l~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 81 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGA-------ELAFTYQGDALKKRVEPLAAELGAFV-AGHCDVTDEASIDAVFET 81 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCchHHHHHHHHHHHhcCCce-EEecCCCCHHHHHHHHHH
Confidence 4579999976 6899999999998875 677776532 1122221111111000 00001100001
Q ss_pred hhhhcCCCcEEEEeCCCCCC-----C--CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH
Q 022227 75 AVEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~~-----~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~ 144 (300)
..+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+.+.-.++..+|+++.....
T Consensus 82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-------- 153 (272)
T PRK08159 82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE-------- 153 (272)
T ss_pred HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc--------
Confidence 12224468999999987531 1 1222 2345667655555555444332223456666643210
Q ss_pred CCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 145 ~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...|....|+.++--...+.+.++.++. +..|+
T Consensus 154 -~~~p~~~~Y~asKaal~~l~~~la~el~--~~gIr 186 (272)
T PRK08159 154 -KVMPHYNVMGVAKAALEASVKYLAVDLG--PKNIR 186 (272)
T ss_pred -cCCCcchhhhhHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1233233466777777777778888775 33444
No 368
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.015 Score=52.35 Aligned_cols=156 Identities=14% Similarity=0.153 Sum_probs=80.2
Q ss_pred CCcEEEEEcCCC--hHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc---cCCcccEEEeCC----
Q 022227 4 EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---FPLLKGVVATTD---- 74 (300)
Q Consensus 4 ~~~kV~IiGAaG--~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~---~~~~~~v~~~~~---- 74 (300)
+.+.+.||||++ -||..++..|+..|. .|++.+.++ +..+ ...++.+.. .....++.-..+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-------~V~~~~r~~--~~~~-~~~~~~~~~g~~~~~~~Dv~d~~~v~~~ 75 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-------ELAFTYQGE--ALGK-RVKPLAESLGSDFVLPCDVEDIASVDAV 75 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-------EEEEecCch--HHHH-HHHHHHHhcCCceEEeCCCCCHHHHHHH
Confidence 446799999875 799999999998875 688887642 1111 111121100 000001110001
Q ss_pred ---hhhhcCCCcEEEEeCCCCCC-----C--CCcHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 75 ---AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 75 ---~~~a~~~aDvVi~~ag~~~~-----~--g~~r~---dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
..+.+...|++|+.||.... + ..+.. ..+..|......+.+.+..+=.+...+|++|+....
T Consensus 76 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~----- 150 (271)
T PRK06505 76 FEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST----- 150 (271)
T ss_pred HHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc-----
Confidence 11224568999999987532 1 12222 234556554444443332211112356777653321
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...|....|+.++--...+.+.+|.++. +..|+
T Consensus 151 ----~~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIr 183 (271)
T PRK06505 151 ----RVMPNYNVMGVAKAALEASVRYLAADYG--PQGIR 183 (271)
T ss_pred ----ccCCccchhhhhHHHHHHHHHHHHHHHh--hcCeE
Confidence 1123223466677766777888888874 34444
No 369
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.72 E-value=0.011 Score=56.18 Aligned_cols=53 Identities=15% Similarity=0.253 Sum_probs=42.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.+||+|+||+|.+|.+++..|...|. ++.++|.+. . ++..+++++||+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~-------~V~~~d~~~-----------~--------------~~~~~~~~~aDl 145 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY-------QVRILEQDD-----------W--------------DRAEDILADAGM 145 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC-------eEEEeCCCc-----------c--------------hhHHHHHhcCCE
Confidence 37899999889999999999998774 789998741 0 133566889999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
||++.
T Consensus 146 Vilav 150 (374)
T PRK11199 146 VIVSV 150 (374)
T ss_pred EEEeC
Confidence 99984
No 370
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.71 E-value=0.0087 Score=48.30 Aligned_cols=76 Identities=20% Similarity=0.153 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+..+|+|+| +|-+|..+++.|...|.- +|.+++++ .++++..+..+... ...+...++..+.+.++|
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~------~i~i~nRt--~~ra~~l~~~~~~~----~~~~~~~~~~~~~~~~~D 77 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGAK------EITIVNRT--PERAEALAEEFGGV----NIEAIPLEDLEEALQEAD 77 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTSS------EEEEEESS--HHHHHHHHHHHTGC----SEEEEEGGGHCHHHHTES
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCCC------EEEEEECC--HHHHHHHHHHcCcc----ccceeeHHHHHHHHhhCC
Confidence 457999999 699999999999988752 69999885 45665444444111 011222345667788999
Q ss_pred EEEEeCCCC
Q 022227 84 IAVMVGGFP 92 (300)
Q Consensus 84 vVi~~ag~~ 92 (300)
+||.+-+.+
T Consensus 78 ivI~aT~~~ 86 (135)
T PF01488_consen 78 IVINATPSG 86 (135)
T ss_dssp EEEE-SSTT
T ss_pred eEEEecCCC
Confidence 999985544
No 371
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.70 E-value=0.0065 Score=56.88 Aligned_cols=77 Identities=18% Similarity=0.424 Sum_probs=49.0
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (300)
|+.+++||+|+||+|.+|..++..|.....|.. .++.++....+ .|+...+.. ..+.+..-..++++
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v---~~l~~~aS~~s----aGk~~~~~~------~~l~v~~~~~~~~~ 67 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNI---AEVTLLSSKRS----AGKTVQFKG------REIIIQEAKINSFE 67 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCc---ccEEEEECccc----CCCCeeeCC------cceEEEeCCHHHhc
Confidence 777889999999999999999988885433320 14777765422 223222211 12333322345678
Q ss_pred CCcEEEEeCC
Q 022227 81 GVNIAVMVGG 90 (300)
Q Consensus 81 ~aDvVi~~ag 90 (300)
++|+||++++
T Consensus 68 ~~Divf~a~~ 77 (347)
T PRK06728 68 GVDIAFFSAG 77 (347)
T ss_pred CCCEEEECCC
Confidence 9999999764
No 372
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.70 E-value=0.018 Score=45.73 Aligned_cols=73 Identities=26% Similarity=0.265 Sum_probs=44.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEE-EEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l-~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
+||+|+|++|.+|+.++..+.+..- .+| ..+|.+++ ...| .|+.+........+.+++++.+.++.+|+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~------~~lv~~v~~~~~--~~~g--~d~g~~~~~~~~~~~v~~~l~~~~~~~DV 70 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPG------FELVGAVDRKPS--AKVG--KDVGELAGIGPLGVPVTDDLEELLEEADV 70 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTT------EEEEEEEETTTS--TTTT--SBCHHHCTSST-SSBEBS-HHHHTTH-SE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCC------cEEEEEEecCCc--cccc--chhhhhhCcCCcccccchhHHHhcccCCE
Confidence 5999999779999999999987421 143 45566531 1222 23333221113345566788888888998
Q ss_pred EEEe
Q 022227 85 AVMV 88 (300)
Q Consensus 85 Vi~~ 88 (300)
||-.
T Consensus 71 vIDf 74 (124)
T PF01113_consen 71 VIDF 74 (124)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8775
No 373
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=96.70 E-value=0.0083 Score=66.00 Aligned_cols=175 Identities=11% Similarity=0.069 Sum_probs=89.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchh-hhhhhhhhhhhhc--cC-CcccEEE-eC------
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-ALNGVKMELVDAA--FP-LLKGVVA-TT------ 73 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~-~l~g~~~dl~~~~--~~-~~~~v~~-~~------ 73 (300)
+++|.||||+||+|++++..|+..+- ....+++.+....+.. ..+.....+.+.. .. ...+++. ..
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~---~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~ 1047 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRS---NSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEK 1047 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCC---CCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCcc
Confidence 47899999999999999999987641 0112455554432111 1110000000000 00 0001111 11
Q ss_pred ------ChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHH---------
Q 022227 74 ------DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA--------- 138 (300)
Q Consensus 74 ------~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~--------- 138 (300)
...+..+++|+|||+|+... ......++...|+..++++++.+.+... . +++.+|.- .+..
T Consensus 1048 lgl~~~~~~~l~~~~d~iiH~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~-~-~~v~vSS~-~v~~~~~~~~~~~ 1123 (1389)
T TIGR03443 1048 FGLSDEKWSDLTNEVDVIIHNGALVH-WVYPYSKLRDANVIGTINVLNLCAEGKA-K-QFSFVSST-SALDTEYYVNLSD 1123 (1389)
T ss_pred CCcCHHHHHHHHhcCCEEEECCcEec-CccCHHHHHHhHHHHHHHHHHHHHhCCC-c-eEEEEeCe-eecCcccccchhh
Confidence 12334568999999987653 2223344556799999999999887643 2 45555532 1110
Q ss_pred HHHHHHCCCCCC-----------CcEEeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecC
Q 022227 139 LILKEFAPSIPA-----------KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (300)
Q Consensus 139 ~~~~~~~~~~p~-----------~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~ 187 (300)
........+++. ..-|+.++.-.+++....++ .|++..-++...|+|.
T Consensus 1124 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443 1124 ELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred hhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccC
Confidence 000000001111 11245566666666655444 3777776666666774
No 374
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.67 E-value=0.02 Score=52.57 Aligned_cols=64 Identities=14% Similarity=0.148 Sum_probs=43.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCC---C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG---V 82 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~---a 82 (300)
|||+||| .|.+|+.++..|...+. +|..+|.++ ++++. +.+. ......+..+.+++ +
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~-------~v~v~dr~~--~~~~~----~~~~------g~~~~~s~~~~~~~~~~a 60 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGH-------EVVGYDVNQ--EAVDV----AGKL------GITARHSLEELVSKLEAP 60 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHH----HHHC------CCeecCCHHHHHHhCCCC
Confidence 4899999 89999999999998764 688899863 33321 2111 12233455565554 6
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||++.
T Consensus 61 dvVi~~v 67 (299)
T PRK12490 61 RTIWVMV 67 (299)
T ss_pred CEEEEEe
Confidence 8998873
No 375
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.65 E-value=0.0075 Score=49.28 Aligned_cols=116 Identities=15% Similarity=0.098 Sum_probs=62.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhh---hhhhhhccC---CcccEEEeCChhhh--
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---MELVDAAFP---LLKGVVATTDAVEA-- 78 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~---~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (300)
++.|+||+|.+|.+++..|++.+.. .+.+.+.++ +..+... .++...... ...++.-..+..+.
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~~------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 73 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGAR------HLVLLSRSG--PDAPGAAELLAELEALGAEVTVVACDVADRAALAAALA 73 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhCC------eEEEEeCCC--CCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 6899999999999999999877631 355565542 1111111 112111000 00000000011111
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 79 -----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 79 -----~~~aDvVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
+...|.+|+.+|..... ..+ -..++..|+.....+.+.+.+... .+++++|+
T Consensus 74 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~ii~~ss 136 (180)
T smart00822 74 AIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPL--DFFVLFSS 136 (180)
T ss_pred HHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCc--ceEEEEcc
Confidence 23469999999864311 111 234567888888888888866543 35666664
No 376
>PLN02256 arogenate dehydrogenase
Probab=96.65 E-value=0.017 Score=53.20 Aligned_cols=65 Identities=14% Similarity=0.223 Sum_probs=43.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc-CCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~-~~a 82 (300)
+.+||+|+| .|.+|.+++..|...|. ++..+|.++ . ...+.++ . +...++..+.+ .++
T Consensus 35 ~~~kI~IIG-~G~mG~slA~~L~~~G~-------~V~~~d~~~--~--~~~a~~~---g------v~~~~~~~e~~~~~a 93 (304)
T PLN02256 35 RKLKIGIVG-FGNFGQFLAKTFVKQGH-------TVLATSRSD--Y--SDIAAEL---G------VSFFRDPDDFCEEHP 93 (304)
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCC-------EEEEEECcc--H--HHHHHHc---C------CeeeCCHHHHhhCCC
Confidence 467999999 79999999999987653 688898763 1 1111111 1 11234555555 479
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||++.
T Consensus 94 DvVilav 100 (304)
T PLN02256 94 DVVLLCT 100 (304)
T ss_pred CEEEEec
Confidence 9999974
No 377
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.62 E-value=0.011 Score=50.44 Aligned_cols=75 Identities=19% Similarity=0.219 Sum_probs=48.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEe-----CChhhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-----TDAVEA 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~-----~~~~~a 78 (300)
+.++++|+||+|.+|..++..|+..+. ++.+++++ .++++....++.+.. ...+... .+..++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-------~V~l~~R~--~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~ 94 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-------RVVLVGRD--LERAQKAADSLRARF---GEGVGAVETSDDAARAAA 94 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCC--HHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHH
Confidence 457999999889999999999987653 68888875 355554433332111 0111111 123477
Q ss_pred cCCCcEEEEeCC
Q 022227 79 CTGVNIAVMVGG 90 (300)
Q Consensus 79 ~~~aDvVi~~ag 90 (300)
++++|+||.+..
T Consensus 95 ~~~~diVi~at~ 106 (194)
T cd01078 95 IKGADVVFAAGA 106 (194)
T ss_pred HhcCCEEEECCC
Confidence 899998888643
No 378
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.58 E-value=0.032 Score=51.36 Aligned_cols=120 Identities=14% Similarity=0.200 Sum_probs=64.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhh----hhhhhccCCcccEEEeCChhhhcC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM----ELVDAAFPLLKGVVATTDAVEACT 80 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~----dl~~~~~~~~~~v~~~~~~~~a~~ 80 (300)
.|||+|+| +|.||..++..|...|. ++.|++... +.++.... -+.+..... .+.......+...
T Consensus 2 ~m~I~IiG-aGaiG~~~a~~L~~~G~-------~V~lv~r~~--~~~~~i~~~~Gl~i~~~g~~~--~~~~~~~~~~~~~ 69 (305)
T PRK05708 2 SMTWHILG-AGSLGSLWACRLARAGL-------PVRLILRDR--QRLAAYQQAGGLTLVEQGQAS--LYAIPAETADAAE 69 (305)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhCCC-------CeEEEEech--HHHHHHhhcCCeEEeeCCcce--eeccCCCCccccc
Confidence 36899999 79999999999988763 688898742 22221110 011000000 0111111123346
Q ss_pred CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHCCCCCCCcEEee
Q 022227 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 156 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~~~~p~~~i~~~ 156 (300)
..|+||++. |. --..+..+.+..+..++..++.+-|=++....+ .+. +|.+++..+
T Consensus 70 ~~D~viv~v----K~------------~~~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l-~~~---~~~~~v~~g 125 (305)
T PRK05708 70 PIHRLLLAC----KA------------YDAEPAVASLAHRLAPGAELLLLQNGLGSQDAV-AAR---VPHARCIFA 125 (305)
T ss_pred ccCEEEEEC----CH------------HhHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHH-HHh---CCCCcEEEE
Confidence 789999984 11 011233444545443466778888877654433 332 454554333
No 379
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.58 E-value=0.049 Score=48.58 Aligned_cols=156 Identities=12% Similarity=0.136 Sum_probs=81.2
Q ss_pred CCcEEEEEcCCC--hHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh-c--cCCcccEEEeCC----
Q 022227 4 EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-A--FPLLKGVVATTD---- 74 (300)
Q Consensus 4 ~~~kV~IiGAaG--~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~-~--~~~~~~v~~~~~---- 74 (300)
+.+.+.||||++ -||..++..|+..|. .|++.+.++ .++....++... . .....++.-..+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-------~v~~~~r~~---~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~ 76 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-------ELWFTYQSE---VLEKRVKPLAEEIGCNFVSELDVTNPKSISNL 76 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-------EEEEEeCch---HHHHHHHHHHHhcCCceEEEccCCCHHHHHHH
Confidence 345789999875 699999999998775 677877642 111111122111 0 000001100001
Q ss_pred ---hhhhcCCCcEEEEeCCCCCC-----C--CCcH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHH
Q 022227 75 ---AVEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (300)
Q Consensus 75 ---~~~a~~~aDvVi~~ag~~~~-----~--g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~ 141 (300)
..+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+...-.+...+|++++....
T Consensus 77 ~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~----- 151 (260)
T PRK06603 77 FDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE----- 151 (260)
T ss_pred HHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc-----
Confidence 12234568999999886421 1 1122 2345566655445444433221123467777754321
Q ss_pred HHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 142 ~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...|....|+.++--...+.+.+|.++. +..|+
T Consensus 152 ----~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 184 (260)
T PRK06603 152 ----KVIPNYNVMGVAKAALEASVKYLANDMG--ENNIR 184 (260)
T ss_pred ----cCCCcccchhhHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1223223466777777777888888775 34454
No 380
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.56 E-value=0.03 Score=50.27 Aligned_cols=62 Identities=21% Similarity=0.221 Sum_probs=43.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.|||+|+| +|.+|++++..|.+.+.+. +.+++.+|.++ +++ .+....+..+.++++|+
T Consensus 3 ~mkI~iIG-~G~mG~ai~~~l~~~~~~~---~~~i~~~~~~~--~~~----------------~~~~~~~~~~~~~~~D~ 60 (260)
T PTZ00431 3 NIRVGFIG-LGKMGSALAYGIENSNIIG---KENIYYHTPSK--KNT----------------PFVYLQSNEELAKTCDI 60 (260)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHhCCCCC---cceEEEECCCh--hcC----------------CeEEeCChHHHHHhCCE
Confidence 46999999 7999999999999876432 11578887653 221 01123355667889999
Q ss_pred EEEe
Q 022227 85 AVMV 88 (300)
Q Consensus 85 Vi~~ 88 (300)
||++
T Consensus 61 Vila 64 (260)
T PTZ00431 61 IVLA 64 (260)
T ss_pred EEEE
Confidence 9987
No 381
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.56 E-value=0.05 Score=48.58 Aligned_cols=158 Identities=16% Similarity=0.198 Sum_probs=79.0
Q ss_pred CCcEEEEEcC--CChHHHHHHHHHHhcccCCCCCCeEEEEEecC-CchhhhhhhhhhhhhhccCCcccEEEeCC------
Q 022227 4 EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIP-PAAEALNGVKMELVDAAFPLLKGVVATTD------ 74 (300)
Q Consensus 4 ~~~kV~IiGA--aG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~-~~~~~l~g~~~dl~~~~~~~~~~v~~~~~------ 74 (300)
+.+++.|||| ++-+|..++..|++.|. .+++.+.. .+.++++....++... .....++.-..+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~ 76 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-------ELAFTYVGDRFKDRITEFAAEFGSD-LVFPCDVASDEQIDALFA 76 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-------eEEEEccchHHHHHHHHHHHhcCCc-ceeeccCCCHHHHHHHHH
Confidence 3467999996 46899999999998875 67777542 1122332211111100 000011110011
Q ss_pred -hhhhcCCCcEEEEeCCCCCCC--------CCcHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHH
Q 022227 75 -AVEACTGVNIAVMVGGFPRKE--------GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (300)
Q Consensus 75 -~~~a~~~aDvVi~~ag~~~~~--------g~~r~---dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~ 142 (300)
..+.+...|++|+.||..... ..+.. ..+..|+.....+.+.+..+-.+...+|++++-...
T Consensus 77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~------ 150 (260)
T PRK06997 77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE------ 150 (260)
T ss_pred HHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc------
Confidence 112245689999999875321 12222 235556554444444433321122456776643210
Q ss_pred HHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 143 ~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
.+.|....|+.++--...+.+.+|.++. +..|+
T Consensus 151 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 183 (260)
T PRK06997 151 ---RVVPNYNTMGLAKASLEASVRYLAVSLG--PKGIR 183 (260)
T ss_pred ---cCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1123222355666666677777887764 33454
No 382
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.56 E-value=0.012 Score=48.07 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=48.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+.++|+|+| +|.+|..++..|...+. . ++.++|.+. ++++..+.++.... ... ...+..+.++++|
T Consensus 18 ~~~~i~iiG-~G~~g~~~a~~l~~~g~-~-----~v~v~~r~~--~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~D 83 (155)
T cd01065 18 KGKKVLILG-AGGAARAVAYALAELGA-A-----KIVIVNRTL--EKAKALAERFGELG----IAI-AYLDLEELLAEAD 83 (155)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCC-C-----EEEEEcCCH--HHHHHHHHHHhhcc----cce-eecchhhccccCC
Confidence 457999999 69999999999987651 1 689999863 44443332222110 011 1235556689999
Q ss_pred EEEEeCCCC
Q 022227 84 IAVMVGGFP 92 (300)
Q Consensus 84 vVi~~ag~~ 92 (300)
+||.+....
T Consensus 84 vvi~~~~~~ 92 (155)
T cd01065 84 LIINTTPVG 92 (155)
T ss_pred EEEeCcCCC
Confidence 999986544
No 383
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.55 E-value=0.019 Score=52.99 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=62.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+.++|+|+| +|.+|..++..|...+.. ++.++|+++ +++...+..+.. .+....+..+++.++|
T Consensus 177 ~~~~V~ViG-aG~iG~~~a~~L~~~g~~------~V~v~~r~~--~ra~~la~~~g~-------~~~~~~~~~~~l~~aD 240 (311)
T cd05213 177 KGKKVLVIG-AGEMGELAAKHLAAKGVA------EITIANRTY--ERAEELAKELGG-------NAVPLDELLELLNEAD 240 (311)
T ss_pred cCCEEEEEC-cHHHHHHHHHHHHHcCCC------EEEEEeCCH--HHHHHHHHHcCC-------eEEeHHHHHHHHhcCC
Confidence 467999999 699999999988875431 688998863 444333322211 1112234667789999
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhH
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN 137 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~ 137 (300)
+||.+.+.+.. . ....... +....++..++-+++|-|+-
T Consensus 241 vVi~at~~~~~-----~-------~~~~~~~---~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 241 VVISATGAPHY-----A-------KIVERAM---KKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred EEEECCCCCch-----H-------HHHHHHH---hhCCCCCeEEEEeCCCCCCc
Confidence 99998665431 1 1111221 11111245788899998743
No 384
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.53 E-value=0.026 Score=54.65 Aligned_cols=117 Identities=20% Similarity=0.210 Sum_probs=66.9
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (300)
|.++.++|.|+| +|.+|..++..|+..|. +|+++|.+.. +.++....++... ..++.......+...
T Consensus 1 ~~~~~k~v~iiG-~g~~G~~~A~~l~~~G~-------~V~~~d~~~~-~~~~~~~~~l~~~----~~~~~~~~~~~~~~~ 67 (450)
T PRK14106 1 MELKGKKVLVVG-AGVSGLALAKFLKKLGA-------KVILTDEKEE-DQLKEALEELGEL----GIELVLGEYPEEFLE 67 (450)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCch-HHHHHHHHHHHhc----CCEEEeCCcchhHhh
Confidence 656678999999 57899999999999886 7999998642 2222212222211 112222222234467
Q ss_pred CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCch
Q 022227 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (300)
Q Consensus 81 ~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~ 134 (300)
++|+||.++|.+.... .....-..+++++.......... + .++|-+|-+.
T Consensus 68 ~~d~vv~~~g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~--~~vI~ITGS~ 117 (450)
T PRK14106 68 GVDLVVVSPGVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K--APIVAITGTN 117 (450)
T ss_pred cCCEEEECCCCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C--CCEEEEeCCC
Confidence 8999999988753211 11112234566666555433322 1 2466666554
No 385
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.53 E-value=0.012 Score=54.32 Aligned_cols=120 Identities=11% Similarity=0.003 Sum_probs=64.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcc-cCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCCh-----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA----- 75 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~-~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~----- 75 (300)
.+.+.||||++.+|..++..|+..| . .|++.++++ ++++....++...... ...++.-..+.
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 73 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-------HVIMACRDF--LKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQ 73 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-------EEEEEeCCH--HHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHH
Confidence 3478999999999999999999877 4 688888753 3333222222110000 00011000011
Q ss_pred --hhhcCCCcEEEEeCCCCCC----CCCcH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCc
Q 022227 76 --VEACTGVNIAVMVGGFPRK----EGMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 76 --~~a~~~aDvVi~~ag~~~~----~g~~r---~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
.+.+...|++|+.||.... +..+. ...+..|... ++.+.+.+++.+....+||++|+-
T Consensus 74 ~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~ 144 (314)
T TIGR01289 74 QFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSI 144 (314)
T ss_pred HHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecC
Confidence 1113468999999987421 11222 2345566544 555566665542112467777653
No 386
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.50 E-value=0.029 Score=51.46 Aligned_cols=64 Identities=19% Similarity=0.284 Sum_probs=42.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCC---C
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG---V 82 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~---a 82 (300)
|||+|+| .|.+|+.++..|+..|. ++.++|.++ ++++. +.+. .+....+..+.++. +
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~-------~v~v~dr~~--~~~~~----~~~~------g~~~~~~~~e~~~~~~~~ 60 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGH-------EVVGYDRNP--EAVEA----LAEE------GATGADSLEELVAKLPAP 60 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCC-------eEEEEECCH--HHHHH----HHHC------CCeecCCHHHHHhhcCCC
Confidence 4899999 89999999999998764 789999863 33332 2211 11223345454444 6
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||++.
T Consensus 61 dvvi~~v 67 (301)
T PRK09599 61 RVVWLMV 67 (301)
T ss_pred CEEEEEe
Confidence 8888873
No 387
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=96.48 E-value=0.0071 Score=52.80 Aligned_cols=161 Identities=17% Similarity=0.196 Sum_probs=97.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCch--hhhhhhhhhh---hhhc-c-------CCcccEEE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMEL---VDAA-F-------PLLKGVVA 71 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~--~~l~g~~~dl---~~~~-~-------~~~~~v~~ 71 (300)
.-||+|.| +|-+|++.|..++..|+ ++.|||+.+.. ..|+...-|+ +... . .....+..
T Consensus 3 ~~ki~ivg-Sgl~g~~WAmlFAs~Gy-------qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~ 74 (313)
T KOG2305|consen 3 FGKIAIVG-SGLVGSSWAMLFASSGY-------QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISG 74 (313)
T ss_pred ccceeEee-cccccchHHHHHhccCc-------eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhC
Confidence 45999999 89999999999999887 89999996421 1122222222 2211 1 01245667
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHC------
Q 022227 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA------ 145 (300)
Q Consensus 72 ~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~------ 145 (300)
++++.|..++|=.|=.+ +.+.+..-+.+-+++.+...| ..|+.|+.+..|...+..-.
T Consensus 75 t~~l~E~vk~Ai~iQEc--------------vpE~L~lkk~ly~qlD~i~d~--~tIlaSSTSt~mpS~~s~gL~~k~q~ 138 (313)
T KOG2305|consen 75 TTSLNELVKGAIHIQEC--------------VPEDLNLKKQLYKQLDEIADP--TTILASSTSTFMPSKFSAGLINKEQC 138 (313)
T ss_pred CccHHHHHhhhhhHHhh--------------chHhhHHHHHHHHHHHHhcCC--ceEEeccccccChHHHhhhhhhhhhe
Confidence 78888888888443222 222344556777788887644 46778877766654332210
Q ss_pred ----CCCCC-----CcE--EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEecCCCC
Q 022227 146 ----PSIPA-----KNI--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS 190 (300)
Q Consensus 146 ----~~~p~-----~~i--~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G~hg~ 190 (300)
|-.|+ -.+ --+|..|+..-.+.+.+++|-.|.-...-+ .|+-=+
T Consensus 139 lvaHPvNPPyfiPLvElVPaPwTsp~tVdrt~~lM~sigq~pV~l~rei-~Gf~ln 193 (313)
T KOG2305|consen 139 LVAHPVNPPYFIPLVELVPAPWTSPDTVDRTRALMRSIGQEPVTLKREI-LGFALN 193 (313)
T ss_pred eEecCCCCCcccchheeccCCCCChhHHHHHHHHHHHhCCCCccccccc-ccceec
Confidence 00111 111 235777776556677889998888887664 565443
No 388
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.47 E-value=0.0097 Score=53.91 Aligned_cols=74 Identities=22% Similarity=0.278 Sum_probs=46.1
Q ss_pred CC-CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEE-EEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhh
Q 022227 1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA 78 (300)
Q Consensus 1 m~-~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~-L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a 78 (300)
|+ |+++||+|+| .|.+|..++..|... .. ..+++ ++|.++ ++.+..+..+. . ....++.++.
T Consensus 1 ~~~m~~irIGIIG-~G~IG~~~a~~L~~~-~~----~~el~aV~dr~~--~~a~~~a~~~g-~-------~~~~~~~eel 64 (271)
T PRK13302 1 MSSRPELRVAIAG-LGAIGKAIAQALDRG-LP----GLTLSAVAVRDP--QRHADFIWGLR-R-------PPPVVPLDQL 64 (271)
T ss_pred CCCCCeeEEEEEC-ccHHHHHHHHHHHhc-CC----CeEEEEEECCCH--HHHHHHHHhcC-C-------CcccCCHHHH
Confidence 44 4678999999 799999999888753 10 12554 778753 33332221111 0 0123466777
Q ss_pred cCCCcEEEEeCC
Q 022227 79 CTGVNIAVMVGG 90 (300)
Q Consensus 79 ~~~aDvVi~~ag 90 (300)
++++|+|++++.
T Consensus 65 l~~~D~Vvi~tp 76 (271)
T PRK13302 65 ATHADIVVEAAP 76 (271)
T ss_pred hcCCCEEEECCC
Confidence 889999999864
No 389
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.041 Score=50.58 Aligned_cols=160 Identities=11% Similarity=0.035 Sum_probs=82.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCc--------hhhhhhhhhhhhhhcc---CCcccEEEe
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--------AEALNGVKMELVDAAF---PLLKGVVAT 72 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~--------~~~l~g~~~dl~~~~~---~~~~~v~~~ 72 (300)
+.+.+.||||++.||..++..|+..|. .|++.+++.. .++++..+..+..... ....++.-.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~ 79 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-------TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVP 79 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCH
Confidence 446899999999999999999998875 6888887521 1222222222221100 000011101
Q ss_pred CC-------hhhhcCCCcEEEEeC-CCCC-----CC--CCcHH---HHHHhhHH----HHHHHHHHHhhhcCCCeEEEEe
Q 022227 73 TD-------AVEACTGVNIAVMVG-GFPR-----KE--GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVV 130 (300)
Q Consensus 73 ~~-------~~~a~~~aDvVi~~a-g~~~-----~~--g~~r~---dl~~~N~~----i~~~i~~~i~~~~~~~~~viv~ 130 (300)
.+ ..+.+...|++|+.| |... .+ ..+.. +.+..|+. ..+.+.+.+.+.. ...||++
T Consensus 80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~--~g~IV~i 157 (305)
T PRK08303 80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP--GGLVVEI 157 (305)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC--CcEEEEE
Confidence 11 112234689999998 7421 11 11111 23344443 4455555554432 2467777
Q ss_pred cCchhhHHHHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 131 ANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 131 sNP~~~~~~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
|+..... .....+..-.|+.++.-...+.+.+|.+++ +..|+
T Consensus 158 sS~~~~~------~~~~~~~~~~Y~asKaal~~lt~~La~el~--~~gIr 199 (305)
T PRK08303 158 TDGTAEY------NATHYRLSVFYDLAKTSVNRLAFSLAHELA--PHGAT 199 (305)
T ss_pred CCccccc------cCcCCCCcchhHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence 7532210 001111112366667666777778888765 44555
No 390
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.013 Score=50.87 Aligned_cols=112 Identities=15% Similarity=0.088 Sum_probs=60.9
Q ss_pred EEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhc-c-CCcccEEEeCChhhhc---CCCc
Q 022227 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEAC---TGVN 83 (300)
Q Consensus 9 ~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~-~-~~~~~v~~~~~~~~a~---~~aD 83 (300)
.|+||+|++|+.++..|++.|. +++++++++ ++++....++.... . ....++.-..+..+++ ...|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-------RVTIASRSR--DRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 3899999999999999998875 788898863 33332222221100 0 0001111111222222 3479
Q ss_pred EEEEeCCCCCCC---CCc---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEec
Q 022227 84 IAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (300)
Q Consensus 84 vVi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~s 131 (300)
++|+.+|..... ..+ -.+.+..|+.....+.+.. .... ...+|+++
T Consensus 72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-~~~~-~g~iv~~s 123 (230)
T PRK07041 72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAA-RIAP-GGSLTFVS 123 (230)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhh-hhcC-CeEEEEEC
Confidence 999999864321 111 2345667777666676633 2222 23455554
No 391
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.41 E-value=0.029 Score=52.66 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=27.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEec
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI 44 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~ 44 (300)
++||+|+||+|++|+.++..|..... .+++++..
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~------~el~~~~~ 36 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPW------FEVTALAA 36 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEEc
Confidence 57999999999999999998885432 26777743
No 392
>PLN02712 arogenate dehydrogenase
Probab=96.40 E-value=0.038 Score=56.38 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=43.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc-CCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~-~~a 82 (300)
+++||+||| .|.+|.+++..|...|. +|..+|.+. ... .+.++ .+...++..+.+ ++|
T Consensus 51 ~~~kIgIIG-~G~mG~slA~~L~~~G~-------~V~~~dr~~--~~~--~A~~~---------Gv~~~~d~~e~~~~~a 109 (667)
T PLN02712 51 TQLKIAIIG-FGNYGQFLAKTLISQGH-------TVLAHSRSD--HSL--AARSL---------GVSFFLDPHDLCERHP 109 (667)
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHH--HHHHc---------CCEEeCCHHHHhhcCC
Confidence 357999999 79999999999987763 688898752 111 11111 112234555544 579
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||++.
T Consensus 110 DvViLav 116 (667)
T PLN02712 110 DVILLCT 116 (667)
T ss_pred CEEEEcC
Confidence 9999983
No 393
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.39 E-value=0.096 Score=46.70 Aligned_cols=155 Identities=15% Similarity=0.208 Sum_probs=77.5
Q ss_pred CCcEEEEEcC--CChHHHHHHHHHHhcccCCCCCCeEEEEEecCC-chhhhhhhhhhhhhhccCCcccEEEeCC------
Q 022227 4 EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAFPLLKGVVATTD------ 74 (300)
Q Consensus 4 ~~~kV~IiGA--aG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~-~~~~l~g~~~dl~~~~~~~~~~v~~~~~------ 74 (300)
+.+.+.|||| ++-||..++..|++.|. .+++.++.+ ..+.++....++.. ......++.-..+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~ 76 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-------ELAFTYVVDKLEERVRKMAAELDS-ELVFRCDVASDDEINQVFA 76 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCcHHHHHHHHHHHhccCC-ceEEECCCCCHHHHHHHHH
Confidence 4468999996 56899999999998875 677766531 11222211111100 0000011111111
Q ss_pred -hhhhcCCCcEEEEeCCCCCC-----C---CCcHHH---HHHhhHHHH----HHHHHHHhhhcCCCeEEEEecCchhhHH
Q 022227 75 -AVEACTGVNIAVMVGGFPRK-----E---GMERKD---VMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNA 138 (300)
Q Consensus 75 -~~~a~~~aDvVi~~ag~~~~-----~---g~~r~d---l~~~N~~i~----~~i~~~i~~~~~~~~~viv~sNP~~~~~ 138 (300)
..+.+...|++|+.||.... + ..+..+ .+..|+... +.+.+.+++. ...+|++|+....
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~---~g~Iv~iss~~~~-- 151 (261)
T PRK08690 77 DLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR---NSAIVALSYLGAV-- 151 (261)
T ss_pred HHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc---CcEEEEEcccccc--
Confidence 11223468999999987532 1 122222 234555433 3333434322 2356676654321
Q ss_pred HHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeE
Q 022227 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (300)
Q Consensus 139 ~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~ 180 (300)
...|....|+.++--...+.+.+|.++. +..|+
T Consensus 152 -------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gIr 184 (261)
T PRK08690 152 -------RAIPNYNVMGMAKASLEAGIRFTAACLG--KEGIR 184 (261)
T ss_pred -------cCCCCcccchhHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1223223466666666667777777664 34454
No 394
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.39 E-value=0.0075 Score=54.58 Aligned_cols=119 Identities=14% Similarity=0.227 Sum_probs=71.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhc----ccCCCCCCeEEEEEecCCc----hhhhhhhhhhhhhhccCCcccEEEeCChh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARG----VMLGTDQPVILHMLDIPPA----AEALNGVKMELVDAAFPLLKGVVATTDAV 76 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~----~~~~~~~~~~l~L~D~~~~----~~~l~g~~~dl~~~~~~~~~~v~~~~~~~ 76 (300)
..||+|.| +|..|..++..|... |+-.+.-...+.++|.+.- .+.+......+.+.. .. ....++.
T Consensus 25 d~~iv~~G-AGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~----~~-~~~~~L~ 98 (279)
T cd05312 25 DQRILFLG-AGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD----EE-KEGKSLL 98 (279)
T ss_pred hcEEEEEC-cCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc----Cc-ccCCCHH
Confidence 36999999 799999999888765 5411111126899997531 111211122222211 10 1235799
Q ss_pred hhcC--CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh---hHHHHHHHH
Q 022227 77 EACT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF 144 (300)
Q Consensus 77 ~a~~--~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~---~~~~~~~~~ 144 (300)
++++ ++|+.|=+.+.+ | -+.+++++.|.++++ +.+|.-.|||.. ....-+.+.
T Consensus 99 e~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~-~PIIFaLSNPt~~~E~~pe~a~~~ 156 (279)
T cd05312 99 EVVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSNE-RPIIFALSNPTSKAECTAEDAYKW 156 (279)
T ss_pred HHHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcCC-CCEEEECCCcCCccccCHHHHHHh
Confidence 9999 899988765433 2 122578888888886 467888899964 444444443
No 395
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.36 E-value=0.03 Score=49.63 Aligned_cols=155 Identities=14% Similarity=0.114 Sum_probs=78.2
Q ss_pred EEEEEcCCChHHHHHHHHHHh----cccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC-----CcccEEEeCChhh
Q 022227 7 RVLVTGAAGQIGYALVPMIAR----GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-----LLKGVVATTDAVE 77 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~----~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~-----~~~~v~~~~~~~~ 77 (300)
.+.||||++.+|..++..|+. .|. .|++.++++ ++++....++...... ...++.-..+..+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~ 72 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS-------VLVLSARND--EALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQ 72 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc-------EEEEEEcCH--HHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHH
Confidence 478999999999999999986 343 688888753 4454443344321000 0001110001111
Q ss_pred hc---C--------CCcEEEEeCCCCCCC----C--CcH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCc
Q 022227 78 AC---T--------GVNIAVMVGGFPRKE----G--MER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 78 a~---~--------~aDvVi~~ag~~~~~----g--~~r---~dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
.+ . +-|++|+.||..... . .+. ...+..|+.. .+.+.+.+.+.......++++|+.
T Consensus 73 ~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~ 152 (256)
T TIGR01500 73 LLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSL 152 (256)
T ss_pred HHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCH
Confidence 11 1 125889999864211 1 111 2345666544 444455554431112456776653
Q ss_pred hhhHHHHHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 134 ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 134 ~~~~~~~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
... ...|..-.++.++.-...+.+.++.++. +.+|+.
T Consensus 153 ~~~---------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~~i~v 189 (256)
T TIGR01500 153 CAI---------QPFKGWALYCAGKAARDMLFQVLALEEK--NPNVRV 189 (256)
T ss_pred HhC---------CCCCCchHHHHHHHHHHHHHHHHHHHhc--CCCeEE
Confidence 321 1122112345555555667777777764 445653
No 396
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.34 E-value=0.03 Score=48.95 Aligned_cols=90 Identities=17% Similarity=0.246 Sum_probs=57.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||.++| .|.||..++..+..+.. + .+ -+.++|.++ ++++. +.... ... ..++..+.+.+.|++
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~-~--~e-~v~v~D~~~--ek~~~----~~~~~---~~~--~~s~ide~~~~~Dlv 64 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRV-D--FE-LVAVYDRDE--EKAKE----LEASV---GRR--CVSDIDELIAEVDLV 64 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCc-c--ee-EEEEecCCH--HHHHH----HHhhc---CCC--ccccHHHHhhcccee
Confidence 5899999 79999998877664421 1 11 467788863 44432 21111 111 125677777999999
Q ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEE
Q 022227 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128 (300)
Q Consensus 86 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~vi 128 (300)
+-+|+. +.+++++..+-+.+. ++.++
T Consensus 65 VEaAS~----------------~Av~e~~~~~L~~g~-d~iV~ 90 (255)
T COG1712 65 VEAASP----------------EAVREYVPKILKAGI-DVIVM 90 (255)
T ss_pred eeeCCH----------------HHHHHHhHHHHhcCC-CEEEE
Confidence 999853 556788888887765 65333
No 397
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.34 E-value=0.022 Score=52.95 Aligned_cols=66 Identities=11% Similarity=-0.018 Sum_probs=44.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+.+||+||| .|.+|.+++..|...|+ +++..+.+.. +....+. ... +.. .+..++++.||
T Consensus 16 ~gktIgIIG-~GsmG~AlA~~L~~sG~-------~Vvv~~r~~~--~s~~~A~---~~G------~~~-~s~~eaa~~AD 75 (330)
T PRK05479 16 KGKKVAIIG-YGSQGHAHALNLRDSGV-------DVVVGLREGS--KSWKKAE---ADG------FEV-LTVAEAAKWAD 75 (330)
T ss_pred CCCEEEEEe-eHHHHHHHHHHHHHCCC-------EEEEEECCch--hhHHHHH---HCC------Cee-CCHHHHHhcCC
Confidence 457999999 79999999999988764 5766665421 1111111 111 112 26778899999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|+++.
T Consensus 76 VVvLaV 81 (330)
T PRK05479 76 VIMILL 81 (330)
T ss_pred EEEEcC
Confidence 999984
No 398
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.33 E-value=0.015 Score=50.89 Aligned_cols=25 Identities=32% Similarity=0.359 Sum_probs=22.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhccc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVM 30 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~ 30 (300)
..+.|+||+|++|+.++..|++.|.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~ 26 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY 26 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC
Confidence 3689999999999999999998764
No 399
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.057 Score=47.90 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCC--hHHHHHHHHHHhcccCCCCCCeEEEEEe
Q 022227 4 EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLD 43 (300)
Q Consensus 4 ~~~kV~IiGAaG--~vG~~la~~L~~~~~~~~~~~~~l~L~D 43 (300)
+.++|.||||+| .+|.+++..|++.|. ++++.+
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~-------~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGA-------DIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCC-------eEEEEe
Confidence 457899999874 799999999998874 566654
No 400
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.29 E-value=0.014 Score=55.54 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
+++||+|+||+|.+|..++..|..... .+|.++...
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~------~el~~l~s~ 72 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPD------FEITVMTAD 72 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCC------CeEEEEECh
Confidence 346999999999999999998887643 278887653
No 401
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=96.28 E-value=0.027 Score=55.31 Aligned_cols=73 Identities=10% Similarity=0.061 Sum_probs=46.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCC--
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG-- 81 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~-- 81 (300)
+.++|++|| .|.+|+.++..|+..|. +|+.+|+.. ++.+.......... ...+....+..+..+.
T Consensus 5 ~~~~IG~IG-LG~MG~~mA~nL~~~G~-------~V~V~NRt~--~k~~~l~~~~~~~G---a~~~~~a~s~~e~v~~l~ 71 (493)
T PLN02350 5 ALSRIGLAG-LAVMGQNLALNIAEKGF-------PISVYNRTT--SKVDETVERAKKEG---NLPLYGFKDPEDFVLSIQ 71 (493)
T ss_pred CCCCEEEEe-eHHHHHHHHHHHHhCCC-------eEEEECCCH--HHHHHHHHhhhhcC---CcccccCCCHHHHHhcCC
Confidence 457899999 99999999999998875 799999863 44332211000000 0112233455555554
Q ss_pred -CcEEEEeC
Q 022227 82 -VNIAVMVG 89 (300)
Q Consensus 82 -aDvVi~~a 89 (300)
+|+||++-
T Consensus 72 ~~dvIi~~v 80 (493)
T PLN02350 72 KPRSVIILV 80 (493)
T ss_pred CCCEEEEEC
Confidence 99999973
No 402
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=96.26 E-value=0.048 Score=49.93 Aligned_cols=81 Identities=20% Similarity=0.219 Sum_probs=52.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhh--------hhhcc-CCcccEEEeCChh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL--------VDAAF-PLLKGVVATTDAV 76 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl--------~~~~~-~~~~~v~~~~~~~ 76 (300)
+|||-|| +|+||-.....++.. +.++++.++|++. ++....--|- .+.-. ....++...+|.+
T Consensus 2 ~kiccig-agyvggptcavia~k-----cp~i~vtvvd~s~--~ri~~wnsd~lpiyepgldevv~~crgknlffstdie 73 (481)
T KOG2666|consen 2 VKICCIG-AGYVGGPTCAVIALK-----CPDIEVTVVDISV--PRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFSTDIE 73 (481)
T ss_pred ceEEEec-CcccCCcchheeeec-----CCceEEEEEecCc--hHhhcccCCCCcccCCCHHHHHHHhcCCceeeecchH
Confidence 6999999 799987655443321 2346899999964 3333221111 11000 1245777888999
Q ss_pred hhcCCCcEEEEeCCCCCC
Q 022227 77 EACTGVNIAVMVGGFPRK 94 (300)
Q Consensus 77 ~a~~~aDvVi~~ag~~~~ 94 (300)
.+++.||+||+....|.+
T Consensus 74 kai~eadlvfisvntptk 91 (481)
T KOG2666|consen 74 KAIKEADLVFISVNTPTK 91 (481)
T ss_pred HHhhhcceEEEEecCCcc
Confidence 999999999998766654
No 403
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.25 E-value=0.043 Score=51.83 Aligned_cols=73 Identities=14% Similarity=0.203 Sum_probs=42.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
++|+|+||+|.+|.-+...|+...-|.. .+++++.... ..+....+.... .........+.++++|+|
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~---~~l~~~ss~~----sg~~~~~f~g~~-----~~v~~~~~~~~~~~~Div 69 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDL---IEPVFFSTSQ----AGGAAPSFGGKE-----GTLQDAFDIDALKKLDII 69 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCc---CcEEEecchh----hCCcccccCCCc-----ceEEecCChhHhcCCCEE
Confidence 6999999999999999986665433321 1477765432 111211222110 111111223567999999
Q ss_pred EEeCC
Q 022227 86 VMVGG 90 (300)
Q Consensus 86 i~~ag 90 (300)
|++++
T Consensus 70 f~a~~ 74 (369)
T PRK06598 70 ITCQG 74 (369)
T ss_pred EECCC
Confidence 99875
No 404
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.23 E-value=0.028 Score=52.32 Aligned_cols=73 Identities=22% Similarity=0.240 Sum_probs=50.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
.+.+++|+| +|..|...+..+....-+ .++.++|+++ ++++..+.++.+. ...+....+.++++++||
T Consensus 127 ~~~~lgiiG-~G~qA~~~l~al~~~~~~-----~~v~V~~r~~--~~~~~~~~~~~~~----g~~v~~~~~~~eav~~aD 194 (325)
T TIGR02371 127 DSSVLGIIG-AGRQAWTQLEALSRVFDL-----EEVSVYCRTP--STREKFALRASDY----EVPVRAATDPREAVEGCD 194 (325)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCC-----CEEEEECCCH--HHHHHHHHHHHhh----CCcEEEeCCHHHHhccCC
Confidence 457899999 899999877666542111 2799999864 5555554444321 123555678899999999
Q ss_pred EEEEe
Q 022227 84 IAVMV 88 (300)
Q Consensus 84 vVi~~ 88 (300)
+|+.+
T Consensus 195 iVita 199 (325)
T TIGR02371 195 ILVTT 199 (325)
T ss_pred EEEEe
Confidence 99875
No 405
>PRK06720 hypothetical protein; Provisional
Probab=96.21 E-value=0.032 Score=46.82 Aligned_cols=36 Identities=22% Similarity=0.187 Sum_probs=30.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
.+.+.+.|+||++.+|..++..|++.|. ++.+.|.+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~-------~V~l~~r~ 49 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGA-------KVIVTDID 49 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEECC
Confidence 3457899999999999999999998774 78899875
No 406
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.18 E-value=0.0049 Score=58.50 Aligned_cols=76 Identities=22% Similarity=0.311 Sum_probs=44.0
Q ss_pred EEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEe--CChhhhcCCCcEE
Q 022227 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT--TDAVEACTGVNIA 85 (300)
Q Consensus 8 V~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~--~~~~~a~~~aDvV 85 (300)
|.|+|| |++|+.++..|++..-+. ++++.|++. ++++.....+...... ...+... .++.+.++++|+|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~-----~v~va~r~~--~~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~dvV 71 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFE-----EVTVADRNP--EKAERLAEKLLGDRVE-AVQVDVNDPESLAELLRGCDVV 71 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE------EEEEEESSH--HHHHHHHT--TTTTEE-EEE--TTTHHHHHHHHTTSSEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCC-----cEEEEECCH--HHHHHHHhhcccccee-EEEEecCCHHHHHHHHhcCCEE
Confidence 789997 999999999998764221 799999963 5554433222111100 0011111 1256678999999
Q ss_pred EEeCCCC
Q 022227 86 VMVGGFP 92 (300)
Q Consensus 86 i~~ag~~ 92 (300)
|.++|..
T Consensus 72 in~~gp~ 78 (386)
T PF03435_consen 72 INCAGPF 78 (386)
T ss_dssp EE-SSGG
T ss_pred EECCccc
Confidence 9998765
No 407
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.16 E-value=0.073 Score=46.01 Aligned_cols=35 Identities=29% Similarity=0.467 Sum_probs=30.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
+..||+|+| +|.+|+.++..|+..|+ + +++|+|.+
T Consensus 20 ~~~~V~IvG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICG-LGGLGSNVAINLARAGI-G-----KLILVDFD 54 (200)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHHcCC-C-----EEEEECCC
Confidence 356999999 79999999999999886 3 69999976
No 408
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=96.15 E-value=0.037 Score=52.15 Aligned_cols=72 Identities=13% Similarity=0.143 Sum_probs=44.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeC-ChhhhcCCCcE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~-~~~~a~~~aDv 84 (300)
+||+|+||+|.||+.+...|.....|. -.+++++.... ..+....+.. ....+.. +..++++++|+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp---~~~~~~~ss~~----s~g~~~~f~~------~~~~v~~~~~~~~~~~vDi 67 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFD---AIRPVFFSTSQ----LGQAAPSFGG------TTGTLQDAFDIDALKALDI 67 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCc---cccEEEEEchh----hCCCcCCCCC------CcceEEcCcccccccCCCE
Confidence 489999999999999999888443332 12688886532 2222222211 1122222 22247899999
Q ss_pred EEEeCC
Q 022227 85 AVMVGG 90 (300)
Q Consensus 85 Vi~~ag 90 (300)
||+++|
T Consensus 68 vffa~g 73 (366)
T TIGR01745 68 IITCQG 73 (366)
T ss_pred EEEcCC
Confidence 999875
No 409
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.14 E-value=0.021 Score=52.62 Aligned_cols=71 Identities=11% Similarity=0.190 Sum_probs=47.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCe-EEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPV-ILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~-~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
..++|+| ||+|.||..+...|-+++. ++ +++|+.... +..|....+. ...+++..-..++++++
T Consensus 2 ~~~~iAi-GATg~VG~~~l~~Leer~f-----pv~~l~l~~s~~---~s~gk~i~f~------g~~~~V~~l~~~~f~~v 66 (322)
T PRK06901 2 ATLNIAI-AAEFELSEKLLEALEQSDL-----EIEQISIVEIEP---FGEEQGIRFN------NKAVEQIAPEEVEWADF 66 (322)
T ss_pred CcceEEE-ecCcHHHHHHHHHHHhcCC-----chhheeeccccc---ccCCCEEEEC------CEEEEEEECCccCcccC
Confidence 3468999 9999999999998887764 22 688887641 1122222221 23444444345679999
Q ss_pred cEEEEeCC
Q 022227 83 NIAVMVGG 90 (300)
Q Consensus 83 DvVi~~ag 90 (300)
|++|+ +|
T Consensus 67 Dia~f-ag 73 (322)
T PRK06901 67 NYVFF-AG 73 (322)
T ss_pred CEEEE-cC
Confidence 99999 65
No 410
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.14 E-value=0.026 Score=52.70 Aligned_cols=75 Identities=24% Similarity=0.392 Sum_probs=44.5
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~ 80 (300)
|+ +++||+|+||+|++|.-++..|.+++. ...+++++...+. .|..+.+.. ....+.....++++
T Consensus 1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~h----P~~~l~~v~s~~~----aG~~l~~~~------~~l~~~~~~~~~~~ 65 (336)
T PRK05671 1 MS-QPLDIAVVGATGTVGEALVQILEERDF----PVGTLHLLASSES----AGHSVPFAG------KNLRVREVDSFDFS 65 (336)
T ss_pred CC-CCCEEEEEccCCHHHHHHHHHHhhCCC----CceEEEEEECccc----CCCeeccCC------cceEEeeCChHHhc
Confidence 54 348999999999999999999886542 1126666654321 122222221 12222221223478
Q ss_pred CCcEEEEeCC
Q 022227 81 GVNIAVMVGG 90 (300)
Q Consensus 81 ~aDvVi~~ag 90 (300)
++|+||++.+
T Consensus 66 ~vD~vFla~p 75 (336)
T PRK05671 66 QVQLAFFAAG 75 (336)
T ss_pred CCCEEEEcCC
Confidence 9999999753
No 411
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.09 E-value=0.026 Score=52.94 Aligned_cols=73 Identities=19% Similarity=0.325 Sum_probs=44.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
.++||+|+||+|++|..++..|..++.- ..++.++....+ .|...+... ..+.+..-..++++++|
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP----~~~l~~las~rs----aGk~~~~~~------~~~~v~~~~~~~~~~~D 71 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFP----YSSLKMLASARS----AGKKVTFEG------RDYTVEELTEDSFDGVD 71 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCC----cceEEEEEccCC----CCCeeeecC------ceeEEEeCCHHHHcCCC
Confidence 5689999999999999999888765421 126666644322 122222211 12233322235678999
Q ss_pred EEEEeCC
Q 022227 84 IAVMVGG 90 (300)
Q Consensus 84 vVi~~ag 90 (300)
+||++++
T Consensus 72 ~vf~a~p 78 (344)
T PLN02383 72 IALFSAG 78 (344)
T ss_pred EEEECCC
Confidence 9999865
No 412
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.07 E-value=0.024 Score=52.98 Aligned_cols=75 Identities=23% Similarity=0.278 Sum_probs=45.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCC
Q 022227 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (300)
Q Consensus 2 ~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~ 81 (300)
-++.+||+|+||+|.+|..++..|.++.. ...++.++-...+ .|....+.. ..+.+......++++
T Consensus 1 ~~~~~~vaIvGATG~vG~ellrlL~~~~h----P~~~l~~laS~~s----aG~~~~~~~------~~~~v~~~~~~~~~~ 66 (336)
T PRK08040 1 MSEGWNIALLGATGAVGEALLELLAERQF----PVGELYALASEES----AGETLRFGG------KSVTVQDAAEFDWSQ 66 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhcCCC----CceEEEEEEccCc----CCceEEECC------cceEEEeCchhhccC
Confidence 03568999999999999999998887422 0127777754321 222222211 123333222344589
Q ss_pred CcEEEEeCC
Q 022227 82 VNIAVMVGG 90 (300)
Q Consensus 82 aDvVi~~ag 90 (300)
+|+||++++
T Consensus 67 ~Dvvf~a~p 75 (336)
T PRK08040 67 AQLAFFVAG 75 (336)
T ss_pred CCEEEECCC
Confidence 999999764
No 413
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.06 E-value=0.021 Score=51.11 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=44.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||+|+| +|.+|+.++..|...+. . ...+.++|.+ .++++. +.+.. ..+....+..+.++++|+|
T Consensus 1 m~IgiIG-~G~mG~aia~~L~~~g~-~---~~~i~v~~r~--~~~~~~----l~~~~----~~~~~~~~~~~~~~~aDvV 65 (258)
T PRK06476 1 MKIGFIG-TGAITEAMVTGLLTSPA-D---VSEIIVSPRN--AQIAAR----LAERF----PKVRIAKDNQAVVDRSDVV 65 (258)
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCCC-C---hheEEEECCC--HHHHHH----HHHHc----CCceEeCCHHHHHHhCCEE
Confidence 4899999 89999999999987753 1 1146677764 243332 21110 0123345666778899999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 66 ilav 69 (258)
T PRK06476 66 FLAV 69 (258)
T ss_pred EEEe
Confidence 9984
No 414
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=96.06 E-value=0.069 Score=48.16 Aligned_cols=70 Identities=20% Similarity=0.246 Sum_probs=47.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
++||++|| +|++|+.++..|+..+... +.+|...|.++ +++. ++.+.. .. . .+++..++...+|+
T Consensus 1 ~~~IgfIG-~G~Mg~Ai~~gl~~~g~~~---~~~I~v~~~~~--e~~~----~l~~~~-g~--~--~~~~~~~~~~~adv 65 (266)
T COG0345 1 MMKIGFIG-AGNMGEAILSGLLKSGALP---PEEIIVTNRSE--EKRA----ALAAEY-GV--V--TTTDNQEAVEEADV 65 (266)
T ss_pred CceEEEEc-cCHHHHHHHHHHHhcCCCC---cceEEEeCCCH--HHHH----HHHHHc-CC--c--ccCcHHHHHhhCCE
Confidence 36999999 7999999999999887422 22677777753 3332 222211 11 1 15566788899999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
||++.
T Consensus 66 v~Lav 70 (266)
T COG0345 66 VFLAV 70 (266)
T ss_pred EEEEe
Confidence 99984
No 415
>PRK09620 hypothetical protein; Provisional
Probab=96.04 E-value=0.019 Score=50.79 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=29.5
Q ss_pred CCcEEEEEcCC----------------ChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 4 EPVRVLVTGAA----------------GQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 4 ~~~kV~IiGAa----------------G~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
+.+||.||+|. |++|++++..|+.+|. +|+++|..
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga-------~V~li~g~ 52 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA-------HVIYLHGY 52 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC-------eEEEEeCC
Confidence 45699999876 9999999999999875 78888853
No 416
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.02 E-value=0.027 Score=52.60 Aligned_cols=71 Identities=21% Similarity=0.340 Sum_probs=43.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
+||+|+||+|++|..++..|.+++. ...+++.+-..++ .+...++.. ..+........+++++|+|
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~h----p~~~l~~l~s~~~----~g~~l~~~g------~~i~v~d~~~~~~~~vDvV 67 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNF----PVDKLRLLASARS----AGKELSFKG------KELKVEDLTTFDFSGVDIA 67 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC----CcceEEEEEcccc----CCCeeeeCC------ceeEEeeCCHHHHcCCCEE
Confidence 6999999999999999998887542 1126666644321 122222211 1233322223457899999
Q ss_pred EEeCC
Q 022227 86 VMVGG 90 (300)
Q Consensus 86 i~~ag 90 (300)
|++.|
T Consensus 68 f~A~g 72 (334)
T PRK14874 68 LFSAG 72 (334)
T ss_pred EECCC
Confidence 99864
No 417
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.02 E-value=0.031 Score=49.96 Aligned_cols=119 Identities=18% Similarity=0.258 Sum_probs=69.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhc----ccCCCCCCeEEEEEecCC----chhhhhhhhhhhhhhccCCcccEEEeCChhh
Q 022227 6 VRVLVTGAAGQIGYALVPMIARG----VMLGTDQPVILHMLDIPP----AAEALNGVKMELVDAAFPLLKGVVATTDAVE 77 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~----~~~~~~~~~~l~L~D~~~----~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~ 77 (300)
.||++.| +|..|..++..|+.. |+-.++-...+.|+|.+. +.+.+......+.+...+ .....++.+
T Consensus 26 ~riv~~G-AGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~----~~~~~~L~e 100 (255)
T PF03949_consen 26 QRIVFFG-AGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNP----EKDWGSLLE 100 (255)
T ss_dssp -EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSST----TT--SSHHH
T ss_pred cEEEEeC-CChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCcc----cccccCHHH
Confidence 5999999 799999999988765 651000001699999753 111222122222221111 111148899
Q ss_pred hcCCC--cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh---hHHHHHHHH
Q 022227 78 ACTGV--NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF 144 (300)
Q Consensus 78 a~~~a--DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~---~~~~~~~~~ 144 (300)
+++++ |++|=+.+.+ | -+.+++++.|.+++. ..+|.-.|||.. ....-+.+.
T Consensus 101 av~~~kPtvLIG~S~~~---g-----------~ft~evv~~Ma~~~e-rPIIF~LSNPt~~aE~~peda~~~ 157 (255)
T PF03949_consen 101 AVKGAKPTVLIGLSGQG---G-----------AFTEEVVRAMAKHNE-RPIIFPLSNPTPKAECTPEDAYEW 157 (255)
T ss_dssp HHHCH--SEEEECSSST---T-----------SS-HHHHHHCHHHSS-SEEEEE-SSSCGGSSS-HHHHHHT
T ss_pred HHHhcCCCEEEEecCCC---C-----------cCCHHHHHHHhccCC-CCEEEECCCCCCcccCCHHHHHhh
Confidence 99999 9988776543 2 223578888889886 567888899965 333444443
No 418
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.01 E-value=0.014 Score=51.90 Aligned_cols=74 Identities=23% Similarity=0.307 Sum_probs=47.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
++|+|+||+|++|++++..|+..+. +++..-.++ +++.... .... ....++.....+..+++|.|.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~-------~v~~~~r~~--~~~~~~~---~~v~-~~~~d~~~~~~l~~a~~G~~~~ 67 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH-------EVRAAVRNP--EAAAALA---GGVE-VVLGDLRDPKSLVAGAKGVDGV 67 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC-------EEEEEEeCH--HHHHhhc---CCcE-EEEeccCCHhHHHHHhccccEE
Confidence 5899999999999999999998764 555554432 3332221 0100 0112222334678889999999
Q ss_pred EEeCCCC
Q 022227 86 VMVGGFP 92 (300)
Q Consensus 86 i~~ag~~ 92 (300)
+++.+..
T Consensus 68 ~~i~~~~ 74 (275)
T COG0702 68 LLISGLL 74 (275)
T ss_pred EEEeccc
Confidence 9987644
No 419
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=95.99 E-value=0.092 Score=45.44 Aligned_cols=119 Identities=17% Similarity=0.198 Sum_probs=72.8
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhh----------hhhhhhhccCCcccEE
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV----------KMELVDAAFPLLKGVV 70 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~----------~~dl~~~~~~~~~~v~ 70 (300)
|+.....|.|+||+.-||..++..+.+.|- +|.+..++ +++|... ++|+.|..... .
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN-------~VIi~gR~--e~~L~e~~~~~p~~~t~v~Dv~d~~~~~--~-- 67 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGN-------TVIICGRN--EERLAEAKAENPEIHTEVCDVADRDSRR--E-- 67 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCC-------EEEEecCc--HHHHHHHHhcCcchheeeecccchhhHH--H--
Confidence 777788999999999999999999988653 67777775 4555432 22222221000 0
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCc-----H---HHHHHhh----HHHHHHHHHHHhhhcCCCeEEEEecCch
Q 022227 71 ATTDAVEACTGVNIAVMVGGFPRKEGME-----R---KDVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPA 134 (300)
Q Consensus 71 ~~~~~~~a~~~aDvVi~~ag~~~~~g~~-----r---~dl~~~N----~~i~~~i~~~i~~~~~~~~~viv~sNP~ 134 (300)
.-.-..+..-+-+++|..||+.|..+.+ . .+.+..| +.....+.+.+.+. |++-+|++|+=.
T Consensus 68 lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q--~~a~IInVSSGL 141 (245)
T COG3967 68 LVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ--PEATIINVSSGL 141 (245)
T ss_pred HHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC--CCceEEEecccc
Confidence 0001223345679999999997754322 1 1223344 45556666766665 367799998643
No 420
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=95.97 E-value=0.015 Score=53.31 Aligned_cols=63 Identities=24% Similarity=0.369 Sum_probs=44.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
|||++|| .|.+|+.++..|++.|+ ++.++|+++. .+ ++... ......+..++.+++|+|
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G~-------~v~v~~~~~~---~~----~~~~~------g~~~~~s~~~~~~~advV 59 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAGH-------QLHVTTIGPV---AD----ELLSL------GAVSVETARQVTEASDII 59 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEeCCHh---HH----HHHHc------CCeecCCHHHHHhcCCEE
Confidence 3899999 89999999999998874 6788887531 11 12111 112234566778999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++-
T Consensus 60 i~~v 63 (292)
T PRK15059 60 FIMV 63 (292)
T ss_pred EEeC
Confidence 9973
No 421
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.92 E-value=0.072 Score=48.06 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=43.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeE-EEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~-l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
+||+|+| .|.+|..++..|...+. ..+ +.++|.++ ++++. +.+.. .....++.++.+.++|+
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~-----~~elv~v~d~~~--~~a~~----~a~~~-----~~~~~~~~~ell~~~Dv 64 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRI-----NAELYAFYDRNL--EKAEN----LASKT-----GAKACLSIDELVEDVDL 64 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCC-----CeEEEEEECCCH--HHHHH----HHHhc-----CCeeECCHHHHhcCCCE
Confidence 6999999 79999999988876431 123 56788753 33332 21110 11234466676789999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
|++++
T Consensus 65 Vvi~a 69 (265)
T PRK13304 65 VVECA 69 (265)
T ss_pred EEEcC
Confidence 99986
No 422
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.91 E-value=0.031 Score=47.17 Aligned_cols=33 Identities=30% Similarity=0.565 Sum_probs=28.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
||+|+| +|.+|+.++..|+..|+ + +++|+|.+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV-G-----NLKLVDFDV 33 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC-C-----eEEEEeCCE
Confidence 689999 79999999999998886 3 699999753
No 423
>PRK07574 formate dehydrogenase; Provisional
Probab=95.90 E-value=0.055 Score=51.50 Aligned_cols=66 Identities=21% Similarity=0.237 Sum_probs=45.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.||+.++..|..-|+ +|+.+|...... +..... .++...++.+.++.||
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~-------~V~~~dr~~~~~-------~~~~~~-----g~~~~~~l~ell~~aD 250 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDV-------KLHYTDRHRLPE-------EVEQEL-----GLTYHVSFDSLVSVCD 250 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCCch-------hhHhhc-----CceecCCHHHHhhcCC
Confidence 347999999 89999999999886554 788999753111 011000 1122346888999999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|++..
T Consensus 251 vV~l~l 256 (385)
T PRK07574 251 VVTIHC 256 (385)
T ss_pred EEEEcC
Confidence 999975
No 424
>PLN02712 arogenate dehydrogenase
Probab=95.90 E-value=0.12 Score=52.87 Aligned_cols=65 Identities=15% Similarity=0.271 Sum_probs=43.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcC-CC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~-~a 82 (300)
+++||+||| .|.+|.+++..|...|. +|..+|.+. +. + .+.++ .+...++..+.++ ++
T Consensus 368 ~~~kIgIIG-lG~mG~slA~~L~~~G~-------~V~~~dr~~--~~-~-~a~~~---------Gv~~~~~~~el~~~~a 426 (667)
T PLN02712 368 SKLKIAIVG-FGNFGQFLAKTMVKQGH-------TVLAYSRSD--YS-D-EAQKL---------GVSYFSDADDLCEEHP 426 (667)
T ss_pred CCCEEEEEe-cCHHHHHHHHHHHHCcC-------EEEEEECCh--HH-H-HHHHc---------CCeEeCCHHHHHhcCC
Confidence 458999999 89999999999987653 788898863 11 1 11111 1122345556565 58
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||++.
T Consensus 427 DvVILav 433 (667)
T PLN02712 427 EVILLCT 433 (667)
T ss_pred CEEEECC
Confidence 9999983
No 425
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.88 E-value=0.062 Score=50.33 Aligned_cols=35 Identities=31% Similarity=0.507 Sum_probs=30.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
+..||+|+| +|.+|+.++..|+..|+ + ++.|+|.+
T Consensus 23 ~~~~VlVvG-~GglGs~va~~La~aGv-g-----~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIG-AGALGTANAEMLVRAGV-G-----KVTIVDRD 57 (339)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 346999999 79999999999998886 4 79999975
No 426
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.87 E-value=0.056 Score=50.34 Aligned_cols=74 Identities=20% Similarity=0.204 Sum_probs=51.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHh-cccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~-~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
..++|+|+| +|..|...+..+.. .+. . ++.+++++ .++++..+.++.+. ....+....+..++++++
T Consensus 131 ~~~~v~IiG-aG~~a~~~~~al~~~~~~-~-----~V~v~~R~--~~~a~~l~~~~~~~---~g~~v~~~~d~~~al~~a 198 (330)
T PRK08291 131 DASRAAVIG-AGEQARLQLEALTLVRPI-R-----EVRVWARD--AAKAEAYAADLRAE---LGIPVTVARDVHEAVAGA 198 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCC-C-----EEEEEcCC--HHHHHHHHHHHhhc---cCceEEEeCCHHHHHccC
Confidence 346899999 79999988777764 332 2 79999986 45666555544321 112344566788999999
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||.+-
T Consensus 199 DiVi~aT 205 (330)
T PRK08291 199 DIIVTTT 205 (330)
T ss_pred CEEEEee
Confidence 9998764
No 427
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.86 E-value=0.032 Score=52.05 Aligned_cols=64 Identities=13% Similarity=-0.042 Sum_probs=44.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.||+.++..|...|+ +|..+|..... . . +.... +. ..++.+.+++||
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~-------~V~~~d~~~~~--~--~--~~~~~-------~~-~~~l~ell~~aD 206 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGM-------RILYYSRTRKP--E--A--EKELG-------AE-YRPLEELLRESD 206 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCCCCh--h--h--HHHcC-------CE-ecCHHHHHhhCC
Confidence 347999999 89999999999886654 78889975321 1 1 00110 11 236788899999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|+++.
T Consensus 207 iV~l~l 212 (333)
T PRK13243 207 FVSLHV 212 (333)
T ss_pred EEEEeC
Confidence 999985
No 428
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.85 E-value=0.063 Score=46.46 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=42.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
.+.+||+|+| +|.+|...+..|+..|. ++++++.... +.+. ++.+.. . -......-.++.+.++
T Consensus 8 l~~k~vLVIG-gG~va~~ka~~Ll~~ga-------~V~VIs~~~~-~~l~----~l~~~~-~--i~~~~~~~~~~~l~~a 71 (202)
T PRK06718 8 LSNKRVVIVG-GGKVAGRRAITLLKYGA-------HIVVISPELT-ENLV----KLVEEG-K--IRWKQKEFEPSDIVDA 71 (202)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEcCCCC-HHHH----HHHhCC-C--EEEEecCCChhhcCCc
Confidence 3567999999 69999999999988763 6888875321 1111 222111 0 0111111234668999
Q ss_pred cEEEEe
Q 022227 83 NIAVMV 88 (300)
Q Consensus 83 DvVi~~ 88 (300)
|+||.+
T Consensus 72 dlViaa 77 (202)
T PRK06718 72 FLVIAA 77 (202)
T ss_pred eEEEEc
Confidence 988876
No 429
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.84 E-value=0.048 Score=50.46 Aligned_cols=64 Identities=11% Similarity=0.124 Sum_probs=44.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.||+.++..|..-|+ ++..+|... +...+ +... ....++.+.+++||
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~-------~V~~~~~~~--~~~~~----~~~~--------~~~~~l~e~l~~aD 192 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGF-------PLRCWSRSR--KSWPG----VQSF--------AGREELSAFLSQTR 192 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCC--CCCCC----ceee--------cccccHHHHHhcCC
Confidence 347999999 89999999999986554 788898743 11111 1100 01236788999999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|+++.
T Consensus 193 vvv~~l 198 (312)
T PRK15469 193 VLINLL 198 (312)
T ss_pred EEEECC
Confidence 999974
No 430
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.84 E-value=0.05 Score=50.05 Aligned_cols=74 Identities=7% Similarity=-0.004 Sum_probs=52.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
...+++|+| +|..+.+.+..++.-.-+. +++++|+++ ++++..+.++.+. ...++....+.++++++||
T Consensus 116 da~~l~iiG-aG~QA~~~~~a~~~v~~i~-----~v~v~~r~~--~~a~~f~~~~~~~---~~~~v~~~~~~~eav~~aD 184 (301)
T PRK06407 116 NVENFTIIG-SGFQAETQLEGMASVYNPK-----RIRVYSRNF--DHARAFAERFSKE---FGVDIRPVDNAEAALRDAD 184 (301)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHhcCCCC-----EEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcCC
Confidence 457899999 7999998877766521111 899999864 5666565555542 1235666678999999999
Q ss_pred EEEEe
Q 022227 84 IAVMV 88 (300)
Q Consensus 84 vVi~~ 88 (300)
+|+.+
T Consensus 185 IV~ta 189 (301)
T PRK06407 185 TITSI 189 (301)
T ss_pred EEEEe
Confidence 98864
No 431
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.81 E-value=0.53 Score=43.29 Aligned_cols=37 Identities=30% Similarity=0.434 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeE-EEEEecCC
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPP 46 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~-l~L~D~~~ 46 (300)
|+++||+|+| +|++|..++..+..... ++ ..++|+++
T Consensus 2 m~klrVAIIG-tG~IGt~hm~~l~~~~~------velvAVvdid~ 39 (302)
T PRK08300 2 MSKLKVAIIG-SGNIGTDLMIKILRSEH------LEPGAMVGIDP 39 (302)
T ss_pred CCCCeEEEEc-CcHHHHHHHHHHhcCCC------cEEEEEEeCCh
Confidence 4568999999 89999998877775322 24 45778864
No 432
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.79 E-value=0.038 Score=53.20 Aligned_cols=73 Identities=21% Similarity=0.234 Sum_probs=48.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+..+|+|+| +|.+|..++..|...|.. +++++|.+. +++...+..+.. ......+..+++.++|
T Consensus 179 ~~~~VlViG-aG~iG~~~a~~L~~~G~~------~V~v~~rs~--~ra~~la~~~g~-------~~i~~~~l~~~l~~aD 242 (417)
T TIGR01035 179 KGKKALLIG-AGEMGELVAKHLLRKGVG------KILIANRTY--ERAEDLAKELGG-------EAVKFEDLEEYLAEAD 242 (417)
T ss_pred cCCEEEEEC-ChHHHHHHHHHHHHCCCC------EEEEEeCCH--HHHHHHHHHcCC-------eEeeHHHHHHHHhhCC
Confidence 347999999 699999999999876642 688998863 343333222211 1111135667889999
Q ss_pred EEEEeCCCC
Q 022227 84 IAVMVGGFP 92 (300)
Q Consensus 84 vVi~~ag~~ 92 (300)
+||.+.+.+
T Consensus 243 vVi~aT~s~ 251 (417)
T TIGR01035 243 IVISSTGAP 251 (417)
T ss_pred EEEECCCCC
Confidence 999986544
No 433
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.76 E-value=0.055 Score=50.04 Aligned_cols=72 Identities=25% Similarity=0.218 Sum_probs=48.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHh-cccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~-~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
.+.+++|+| +|..+.+.+..++. .+ +. +|.++|++ .++++..+.++.+ +...+....+.++++++|
T Consensus 127 ~~~~l~viG-aG~QA~~~~~a~~~~~~-i~-----~v~v~~r~--~~~~~~~~~~~~~----~~~~v~~~~~~~~av~~a 193 (313)
T PF02423_consen 127 DARTLGVIG-AGVQARWHLRALAAVRP-IK-----EVRVYSRS--PERAEAFAARLRD----LGVPVVAVDSAEEAVRGA 193 (313)
T ss_dssp T--EEEEE---SHHHHHHHHHHHHHS---S-----EEEEE-SS--HHHHHHHHHHHHC----CCTCEEEESSHHHHHTTS
T ss_pred CCceEEEEC-CCHHHHHHHHHHHHhCC-ce-----EEEEEccC--hhHHHHHHHhhcc----ccccceeccchhhhcccC
Confidence 456899999 79999988877664 33 22 89999986 4666666666655 244666777899999999
Q ss_pred cEEEEe
Q 022227 83 NIAVMV 88 (300)
Q Consensus 83 DvVi~~ 88 (300)
|+|+.+
T Consensus 194 Dii~ta 199 (313)
T PF02423_consen 194 DIIVTA 199 (313)
T ss_dssp SEEEE-
T ss_pred CEEEEc
Confidence 988764
No 434
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.75 E-value=0.055 Score=50.31 Aligned_cols=74 Identities=14% Similarity=0.123 Sum_probs=49.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHh-cccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~-~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
...+++|+| +|..|...+..++. .++ . ++.++|+++ ++++..+.++.+. ...++....+.+++++++
T Consensus 126 ~~~~v~iiG-aG~~a~~~~~al~~~~~~-~-----~v~v~~r~~--~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~a 193 (325)
T PRK08618 126 DAKTLCLIG-TGGQAKGQLEAVLAVRDI-E-----RVRVYSRTF--EKAYAFAQEIQSK---FNTEIYVVNSADEAIEEA 193 (325)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHhcCCc-c-----EEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcC
Confidence 357899999 79999887766653 232 2 799999863 5555554444321 112344456778899999
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||.+-
T Consensus 194 DiVi~aT 200 (325)
T PRK08618 194 DIIVTVT 200 (325)
T ss_pred CEEEEcc
Confidence 9988763
No 435
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=95.74 E-value=0.039 Score=53.86 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=55.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhh---hcCCCc
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE---ACTGVN 83 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~---a~~~aD 83 (300)
+|+||| .|.+|.+++..|+..|. +|.++|+++ ++++....+.... ..+....+..+ .++.+|
T Consensus 1 ~IG~IG-LG~MG~~mA~nL~~~G~-------~V~v~drt~--~~~~~l~~~~~~g-----~~~~~~~s~~e~v~~l~~~d 65 (467)
T TIGR00873 1 DIGVIG-LAVMGSNLALNMADHGF-------TVSVYNRTP--EKTDEFLAEHAKG-----KKIVGAYSIEEFVQSLERPR 65 (467)
T ss_pred CEEEEe-eHHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHhhccCC-----CCceecCCHHHHHhhcCCCC
Confidence 489999 89999999999998875 799999863 4443221110000 01222223333 456789
Q ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCc
Q 022227 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 84 vVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
+||++.- ++ +.+.++.+.+..+-.++.++|-.||.
T Consensus 66 vIil~v~----~~-----------~~v~~Vi~~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 66 KIMLMVK----AG-----------APVDAVINQLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred EEEEECC----Cc-----------HHHHHHHHHHHhhCCCCCEEEECCCc
Confidence 8888741 11 22223334444443335567778773
No 436
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=95.72 E-value=0.085 Score=49.84 Aligned_cols=78 Identities=19% Similarity=0.210 Sum_probs=52.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhh------hh--hhhhhc--cCCcccEEEeCC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV------KM--ELVDAA--FPLLKGVVATTD 74 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~------~~--dl~~~~--~~~~~~v~~~~~ 74 (300)
.++|+|+| .|+||..+|-.++..|. .+.=+|+++ .+.+.. .. ++.... .-...++..|++
T Consensus 9 ~~~I~ViG-LGYVGLPlA~~fA~~G~-------~ViG~DIn~--~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraTtd 78 (436)
T COG0677 9 SATIGVIG-LGYVGLPLAAAFASAGF-------KVIGVDINQ--KKVDKLNRGESYIEEPDLDEVVKEAVESGKLRATTD 78 (436)
T ss_pred ceEEEEEc-cccccHHHHHHHHHcCC-------ceEeEeCCH--HHHHHHhCCcceeecCcHHHHHHHHHhcCCceEecC
Confidence 48999999 99999999999998875 688999974 332211 00 111100 011356788888
Q ss_pred hhhhcCCCcEEEEeCCCCC
Q 022227 75 AVEACTGVNIAVMVGGFPR 93 (300)
Q Consensus 75 ~~~a~~~aDvVi~~ag~~~ 93 (300)
. +.++.||++|++.=.|-
T Consensus 79 ~-~~l~~~dv~iI~VPTPl 96 (436)
T COG0677 79 P-EELKECDVFIICVPTPL 96 (436)
T ss_pred h-hhcccCCEEEEEecCCc
Confidence 6 55789999999864443
No 437
>PRK08605 D-lactate dehydrogenase; Validated
Probab=95.71 E-value=0.037 Score=51.68 Aligned_cols=63 Identities=27% Similarity=0.323 Sum_probs=43.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.+||+|+| .|.+|+.++..|+. + ++ .++..+|..... . .... +...+++.+++++||+
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~-~-~g----~~V~~~d~~~~~-~-------~~~~-------~~~~~~l~ell~~aDv 203 (332)
T PRK08605 146 DLKVAVIG-TGRIGLAVAKIFAK-G-YG----SDVVAYDPFPNA-K-------AATY-------VDYKDTIEEAVEGADI 203 (332)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-c-CC----CEEEEECCCccH-h-------HHhh-------ccccCCHHHHHHhCCE
Confidence 57999999 79999999999853 2 22 278888875311 1 0010 1123467889999999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
|+++.
T Consensus 204 Ivl~l 208 (332)
T PRK08605 204 VTLHM 208 (332)
T ss_pred EEEeC
Confidence 99985
No 438
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.70 E-value=0.044 Score=50.50 Aligned_cols=72 Identities=14% Similarity=0.064 Sum_probs=50.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHh-cccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~-~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
...+|+|+| +|..|...+..++. .+. .++.++|++ .++++..+.++.... ..+. ..+.++++.++
T Consensus 124 ~~~~v~IiG-aG~qa~~~~~al~~~~~~------~~v~v~~r~--~~~a~~~a~~~~~~~----~~~~-~~~~~~av~~a 189 (304)
T PRK07340 124 PPGDLLLIG-TGVQARAHLEAFAAGLPV------RRVWVRGRT--AASAAAFCAHARALG----PTAE-PLDGEAIPEAV 189 (304)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhCCC------CEEEEEcCC--HHHHHHHHHHHHhcC----CeeE-ECCHHHHhhcC
Confidence 457999999 79999999988875 332 179999986 356665555554211 1222 35678899999
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+||.+-
T Consensus 190 DiVitaT 196 (304)
T PRK07340 190 DLVVTAT 196 (304)
T ss_pred CEEEEcc
Confidence 9998863
No 439
>PRK07589 ornithine cyclodeaminase; Validated
Probab=95.68 E-value=0.061 Score=50.46 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
...+++|+| +|..+.+.+..++.-.-+ .++.++++.+ ++++..+.++.+. ..++...++.++++++||
T Consensus 128 da~~l~iiG-aG~QA~~~l~a~~~vr~i-----~~V~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~AD 195 (346)
T PRK07589 128 DSRTMALIG-NGAQSEFQALAFKALLGI-----EEIRLYDIDP--AATAKLARNLAGP----GLRIVACRSVAEAVEGAD 195 (346)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHHhCCc-----eEEEEEeCCH--HHHHHHHHHHHhc----CCcEEEeCCHHHHHhcCC
Confidence 457899999 799998877666542111 2899999864 5666555555431 124556678999999999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|+.+-
T Consensus 196 IIvtaT 201 (346)
T PRK07589 196 IITTVT 201 (346)
T ss_pred EEEEec
Confidence 988753
No 440
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=95.68 E-value=0.19 Score=46.48 Aligned_cols=68 Identities=25% Similarity=0.241 Sum_probs=44.9
Q ss_pred cEEEEEcCCCh--------------------HHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhh-hhhhhhhhhccC
Q 022227 6 VRVLVTGAAGQ--------------------IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFP 64 (300)
Q Consensus 6 ~kV~IiGAaG~--------------------vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~-g~~~dl~~~~~~ 64 (300)
|||.|-| +|+ -|+.+|..|+..|+ +|+++|+++ ++++ .....+.+.
T Consensus 1 ~~~~~~g-~gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh-------eV~V~Drnr--sa~e~e~~e~Laea--- 67 (341)
T TIGR01724 1 MKVSVYG-AGNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH-------DVVLAEPNR--EFMSDDLWKKVEDA--- 67 (341)
T ss_pred CeeEEec-CcchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC-------EEEEEeCCh--hhhhhhhhHHHHHC---
Confidence 5888888 464 37889999888775 799999863 2221 111223322
Q ss_pred CcccEEEeCChhhhcCCCcEEEEeC
Q 022227 65 LLKGVVATTDAVEACTGVNIAVMVG 89 (300)
Q Consensus 65 ~~~~v~~~~~~~~a~~~aDvVi~~a 89 (300)
.....++..++.+++|+||.+-
T Consensus 68 ---GA~~AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 68 ---GVKVVSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred ---CCeecCCHHHHHhCCCEEEEec
Confidence 1233456789999999999983
No 441
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.68 E-value=0.067 Score=49.48 Aligned_cols=72 Identities=19% Similarity=0.198 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHh-cccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~-~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
...+|+|+| +|.+|...+..++. .+. . +|.++++.+ ++++..+.++.+. ...+....+.++++++|
T Consensus 124 ~~~~v~iiG-~G~~a~~~~~al~~~~~~-~-----~V~V~~Rs~--~~a~~~a~~~~~~----g~~~~~~~~~~~av~~a 190 (314)
T PRK06141 124 DASRLLVVG-TGRLASLLALAHASVRPI-K-----QVRVWGRDP--AKAEALAAELRAQ----GFDAEVVTDLEAAVRQA 190 (314)
T ss_pred CCceEEEEC-CcHHHHHHHHHHHhcCCC-C-----EEEEEcCCH--HHHHHHHHHHHhc----CCceEEeCCHHHHHhcC
Confidence 457999999 79999999876654 332 1 799999863 5565555554321 11344556778899999
Q ss_pred cEEEEe
Q 022227 83 NIAVMV 88 (300)
Q Consensus 83 DvVi~~ 88 (300)
|+|+.+
T Consensus 191 DIVi~a 196 (314)
T PRK06141 191 DIISCA 196 (314)
T ss_pred CEEEEe
Confidence 998654
No 442
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=95.67 E-value=0.12 Score=53.26 Aligned_cols=68 Identities=22% Similarity=0.252 Sum_probs=45.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEE
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvV 85 (300)
.||+|+| +|.+|..++..|...|.. .+|..+|.++ ++++. +.+. .. .....++..++++++|+|
T Consensus 4 ~~I~IIG-~G~mG~ala~~l~~~G~~-----~~V~~~d~~~--~~~~~-a~~~--g~-----~~~~~~~~~~~~~~aDvV 67 (735)
T PRK14806 4 GRVVVIG-LGLIGGSFAKALRERGLA-----REVVAVDRRA--KSLEL-AVSL--GV-----IDRGEEDLAEAVSGADVI 67 (735)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCC-----CEEEEEECCh--hHHHH-HHHC--CC-----CCcccCCHHHHhcCCCEE
Confidence 6899999 799999999999887631 1688899864 33321 1111 10 001233566778999999
Q ss_pred EEeC
Q 022227 86 VMVG 89 (300)
Q Consensus 86 i~~a 89 (300)
|++.
T Consensus 68 ilav 71 (735)
T PRK14806 68 VLAV 71 (735)
T ss_pred EECC
Confidence 9974
No 443
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.66 E-value=0.057 Score=46.68 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
...||+|+| +|.+|+.++..|+..|+ + ++.|+|.+
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv-~-----~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGV-G-----TIVIVDDD 54 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEecCC
Confidence 356999999 79999999999998885 3 78999875
No 444
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=95.66 E-value=0.06 Score=49.02 Aligned_cols=60 Identities=22% Similarity=0.375 Sum_probs=42.7
Q ss_pred EEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEEEeC
Q 022227 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (300)
Q Consensus 10 IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi~~a 89 (300)
||| .|.+|..++..|+..|. ++.++|+++ ++++. +... .....++..++++++|+||++.
T Consensus 1 ~IG-lG~mG~~mA~~L~~~G~-------~V~v~dr~~--~~~~~----l~~~------g~~~~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIG-LGNMGGPMAANLLKAGH-------PVRVFDLFP--DAVEE----AVAA------GAQAAASPAEAAEGADRVITML 60 (288)
T ss_pred CCc-ccHhHHHHHHHHHhCCC-------eEEEEeCCH--HHHHH----HHHc------CCeecCCHHHHHhcCCEEEEeC
Confidence 578 89999999999998764 789999863 33322 2211 1223456778899999999984
No 445
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.64 E-value=0.048 Score=51.05 Aligned_cols=36 Identities=31% Similarity=0.422 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
+..||+|+| +|.+|+.++..|+..|+ + ++.|+|.+.
T Consensus 23 ~~~~VlIiG-~GglGs~va~~La~aGv-g-----~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVG-AGALGAANAEALVRAGI-G-----KLTIADRDY 58 (338)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCCc
Confidence 346899999 79999999999999886 3 799999763
No 446
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.64 E-value=0.089 Score=50.69 Aligned_cols=66 Identities=20% Similarity=0.149 Sum_probs=44.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
...+|+|+| .|.+|..++..|...|. +|+.+|+++ .++....+ +.. .. .+..++++++|
T Consensus 211 ~Gk~VlViG-~G~IG~~vA~~lr~~Ga-------~ViV~d~dp--~ra~~A~~---~G~-------~v-~~l~eal~~aD 269 (425)
T PRK05476 211 AGKVVVVAG-YGDVGKGCAQRLRGLGA-------RVIVTEVDP--ICALQAAM---DGF-------RV-MTMEEAAELGD 269 (425)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEcCCc--hhhHHHHh---cCC-------Ee-cCHHHHHhCCC
Confidence 356899999 79999999999887664 789999864 22211111 111 11 14567889999
Q ss_pred EEEEeCC
Q 022227 84 IAVMVGG 90 (300)
Q Consensus 84 vVi~~ag 90 (300)
+||.+.|
T Consensus 270 VVI~aTG 276 (425)
T PRK05476 270 IFVTATG 276 (425)
T ss_pred EEEECCC
Confidence 9988754
No 447
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.63 E-value=0.064 Score=49.70 Aligned_cols=71 Identities=23% Similarity=0.369 Sum_probs=44.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCe-EEEEEecCCchhhhhhhh-hhhhhhccCCcccEEEeC--ChhhhcC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPV-ILHMLDIPPAAEALNGVK-MELVDAAFPLLKGVVATT--DAVEACT 80 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~-~l~L~D~~~~~~~l~g~~-~dl~~~~~~~~~~v~~~~--~~~~a~~ 80 (300)
++||+|+||+|.||+.++..|.++.. ++ ++.++-..++ .|.. .++..-. +.+.. ....+++
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f-----~~~~~~~~AS~rS----aG~~~~~f~~~~------~~v~~~~~~~~~~~ 65 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF-----PFEELVLLASARS----AGKKYIEFGGKS------IGVPEDAADEFVFS 65 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC-----CcceEEEEecccc----cCCccccccCcc------ccCccccccccccc
Confidence 36899999999999999999887532 22 4666654332 2222 3333221 11111 1234577
Q ss_pred CCcEEEEeCC
Q 022227 81 GVNIAVMVGG 90 (300)
Q Consensus 81 ~aDvVi~~ag 90 (300)
++|+||.++|
T Consensus 66 ~~Divf~~ag 75 (334)
T COG0136 66 DVDIVFFAAG 75 (334)
T ss_pred cCCEEEEeCc
Confidence 9999999985
No 448
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.61 E-value=0.11 Score=48.89 Aligned_cols=34 Identities=21% Similarity=0.375 Sum_probs=26.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEE-EEecC
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIP 45 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~-L~D~~ 45 (300)
+||+|+||+|.+|..++..|..... .+++ +++..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~------~el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPE------VEITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEeccc
Confidence 4899999999999999998885432 2566 66654
No 449
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.60 E-value=0.098 Score=50.24 Aligned_cols=66 Identities=15% Similarity=0.097 Sum_probs=44.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
...+|+|+| .|.+|..++..+...|. +++.+|+++ .++. .+..+ .. . . .+..++++++|
T Consensus 201 ~GktVvViG-~G~IG~~va~~ak~~Ga-------~ViV~d~d~--~R~~-~A~~~--G~-----~--~-~~~~e~v~~aD 259 (413)
T cd00401 201 AGKVAVVAG-YGDVGKGCAQSLRGQGA-------RVIVTEVDP--ICAL-QAAME--GY-----E--V-MTMEEAVKEGD 259 (413)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEECCh--hhHH-HHHhc--CC-----E--E-ccHHHHHcCCC
Confidence 346999999 79999999998887664 677788864 3332 11111 11 1 1 13457789999
Q ss_pred EEEEeCC
Q 022227 84 IAVMVGG 90 (300)
Q Consensus 84 vVi~~ag 90 (300)
+||.+.|
T Consensus 260 VVI~atG 266 (413)
T cd00401 260 IFVTTTG 266 (413)
T ss_pred EEEECCC
Confidence 9998765
No 450
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.55 E-value=0.11 Score=48.69 Aligned_cols=170 Identities=11% Similarity=0.076 Sum_probs=85.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhh---hhh-hhhhccCCcccEEEe---------
Q 022227 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV---KME-LVDAAFPLLKGVVAT--------- 72 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~---~~d-l~~~~~~~~~~v~~~--------- 72 (300)
++|.+|||+||+|..++..|+.+--.. -+.|+--+ ++|.+... ..+ ..+-......++++-
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~k-----v~cLVRA~-s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~l 74 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAK-----VICLVRAQ-SDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDL 74 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCc-----EEEEEecC-CHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccC
Confidence 378999999999999999988653211 34555444 32322211 111 101000001122211
Q ss_pred ---CChhhhcC-CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHHC-CC
Q 022227 73 ---TDAVEACT-GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA-PS 147 (300)
Q Consensus 73 ---~~~~~a~~-~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~~-~~ 147 (300)
...+..+. ++|.|||.|...-- -..-..+...|+..+.++.+.....-+ .. +..+|. ..+.++..-... ..
T Consensus 75 GL~~~~~~~La~~vD~I~H~gA~Vn~-v~pYs~L~~~NVlGT~evlrLa~~gk~-Kp-~~yVSs-isv~~~~~~~~~~~~ 150 (382)
T COG3320 75 GLSERTWQELAENVDLIIHNAALVNH-VFPYSELRGANVLGTAEVLRLAATGKP-KP-LHYVSS-ISVGETEYYSNFTVD 150 (382)
T ss_pred CCCHHHHHHHhhhcceEEecchhhcc-cCcHHHhcCcchHhHHHHHHHHhcCCC-ce-eEEEee-eeeccccccCCCccc
Confidence 11223344 59999998764320 112245677899999999987765422 21 444443 322221100000 00
Q ss_pred C----CC----CcE---EeeehhhHHHHHHHHHHHcCCCCCCeEEEEEec
Q 022227 148 I----PA----KNI---TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (300)
Q Consensus 148 ~----p~----~~i---~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V~G 186 (300)
+ |. ... ++-++--.+.+.+...+. |++..-+|.-.|.|
T Consensus 151 ~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~g 199 (382)
T COG3320 151 FDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITG 199 (382)
T ss_pred cccccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeec
Confidence 1 11 111 233566666666665555 88777776555445
No 451
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.54 E-value=0.079 Score=49.27 Aligned_cols=74 Identities=19% Similarity=0.191 Sum_probs=51.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHh-cccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~-~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
...+++|+| +|..+...+..|+. .++ . ++.+++++. ++++..+.++.+. ...++....+.++++++|
T Consensus 128 ~~~~v~iiG-aG~qA~~~~~al~~~~~i-~-----~v~V~~R~~--~~a~~~a~~~~~~---~g~~v~~~~~~~~av~~a 195 (326)
T TIGR02992 128 DSSVVAIFG-AGMQARLQLEALTLVRDI-R-----SARIWARDS--AKAEALALQLSSL---LGIDVTAATDPRAAMSGA 195 (326)
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHhCCc-c-----EEEEECCCH--HHHHHHHHHHHhh---cCceEEEeCCHHHHhccC
Confidence 346899999 79999998888864 332 1 699998863 5666555555321 112344556788899999
Q ss_pred cEEEEeC
Q 022227 83 NIAVMVG 89 (300)
Q Consensus 83 DvVi~~a 89 (300)
|+|+.+-
T Consensus 196 DiVvtaT 202 (326)
T TIGR02992 196 DIIVTTT 202 (326)
T ss_pred CEEEEec
Confidence 9998863
No 452
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.53 E-value=0.086 Score=48.83 Aligned_cols=73 Identities=16% Similarity=0.063 Sum_probs=50.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
.+.+++|+| +|..+.+.+..++.-.-+ .+|.++|+.+ ++++..+..+.+. ..++...++..+++++||
T Consensus 127 d~~~l~iiG-~G~qA~~~~~a~~~v~~i-----~~v~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~AD 194 (315)
T PRK06823 127 HVSAIGIVG-TGIQARMQLMYLKNVTDC-----RQLWVWGRSE--TALEEYRQYAQAL----GFAVNTTLDAAEVAHAAN 194 (315)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhcCCC-----CEEEEECCCH--HHHHHHHHHHHhc----CCcEEEECCHHHHhcCCC
Confidence 457899999 899999888777653111 1899999864 5555544333321 224556678889999999
Q ss_pred EEEEe
Q 022227 84 IAVMV 88 (300)
Q Consensus 84 vVi~~ 88 (300)
+|+.+
T Consensus 195 IV~ta 199 (315)
T PRK06823 195 LIVTT 199 (315)
T ss_pred EEEEe
Confidence 99875
No 453
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=95.52 E-value=0.033 Score=49.73 Aligned_cols=120 Identities=14% Similarity=0.103 Sum_probs=71.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccC----CCCCCeEEEEEecCCc----hhhhhhhhhhhhhhccCCcccEEEeCChh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVML----GTDQPVILHMLDIPPA----AEALNGVKMELVDAAFPLLKGVVATTDAV 76 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~----~~~~~~~l~L~D~~~~----~~~l~g~~~dl~~~~~~~~~~v~~~~~~~ 76 (300)
..||++.| +|..|..++..|+..+.- .+.-...++++|.+.- ...+......+.+.. +.-....++.
T Consensus 25 d~riv~~G-AGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~----~~~~~~~~L~ 99 (254)
T cd00762 25 EHKVLFNG-AGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFA----NPERESGDLE 99 (254)
T ss_pred hcEEEEEC-cCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHc----CcccccCCHH
Confidence 36999999 799999999888764331 1100126899997530 111111111111111 1111235899
Q ss_pred hhcC--CCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh---hHHHHHHHH
Q 022227 77 EACT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF 144 (300)
Q Consensus 77 ~a~~--~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~---~~~~~~~~~ 144 (300)
++++ ++|+.|=+.+.+ | -+.+++++.|.++++ ..+|.-.|||.. ....-+.+.
T Consensus 100 eav~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~-~PIIFaLSNPt~~aE~tpe~a~~~ 157 (254)
T cd00762 100 DAVEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEINE-RPVIFALSNPTSKAECTAEEAYTA 157 (254)
T ss_pred HHHHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcCC-CCEEEECCCcCCccccCHHHHHhh
Confidence 9999 999988765543 2 123578888888886 467888899974 444454443
No 454
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.52 E-value=0.46 Score=44.02 Aligned_cols=164 Identities=15% Similarity=0.102 Sum_probs=92.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCC-----------cccEEE-
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----------LKGVVA- 71 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~-----------~~~v~~- 71 (300)
+.+.+.||||+.-||..++..|+.+|. +|++..++. ++.+..+.++....... ...+..
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga-------~Vv~~~R~~--~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~f 104 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGA-------HVVLACRNE--ERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKF 104 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHH
Confidence 446788999999999999999999883 688887753 44444444454311000 011110
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCC---cH-HHHHHhhH----HHHHHHHHHHhhhcCCCeEEEEecCchh----hHHH
Q 022227 72 TTDAVEACTGVNIAVMVGGFPRKEGM---ER-KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPAN----TNAL 139 (300)
Q Consensus 72 ~~~~~~a~~~aDvVi~~ag~~~~~g~---~r-~dl~~~N~----~i~~~i~~~i~~~~~~~~~viv~sNP~~----~~~~ 139 (300)
..........-|+.|.-||+...+.. +- +..+..|. -++..+.+.+++.+| .+||++|+-.- -+-.
T Consensus 105 a~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~--~RIV~vsS~~~~~~~~~~~ 182 (314)
T KOG1208|consen 105 AEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP--SRIVNVSSILGGGKIDLKD 182 (314)
T ss_pred HHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC--CCEEEEcCccccCccchhh
Confidence 01122334567999999998543322 11 12244453 455666677776654 58888886321 0001
Q ss_pred HHHHHCCCCCCCcEEeeehhhHHHHHHHHHHHcCCCCCCeEE
Q 022227 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (300)
Q Consensus 140 ~~~~~~~~~p~~~i~~~t~ld~~R~~~~la~~l~v~~~~V~~ 181 (300)
+-.+..+.+...+.++.+.+...-+...+++++.- +|..
T Consensus 183 l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~---~V~~ 221 (314)
T KOG1208|consen 183 LSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK---GVTT 221 (314)
T ss_pred ccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc---CceE
Confidence 11111011222224677788777788889988864 5553
No 455
>PLN03139 formate dehydrogenase; Provisional
Probab=95.50 E-value=0.095 Score=49.91 Aligned_cols=66 Identities=20% Similarity=0.141 Sum_probs=44.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.||..++..|..-|+ ++..+|.... ..+ .. .+. .+....++.+.+++||
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~afG~-------~V~~~d~~~~--~~~-~~---~~~------g~~~~~~l~ell~~sD 257 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPFNC-------NLLYHDRLKM--DPE-LE---KET------GAKFEEDLDAMLPKCD 257 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCC-------EEEEECCCCc--chh-hH---hhc------CceecCCHHHHHhhCC
Confidence 357999999 89999999999986543 6888887531 111 00 010 1112236888899999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|+++.
T Consensus 258 vV~l~l 263 (386)
T PLN03139 258 VVVINT 263 (386)
T ss_pred EEEEeC
Confidence 999974
No 456
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.49 E-value=0.26 Score=39.80 Aligned_cols=32 Identities=31% Similarity=0.594 Sum_probs=28.0
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
||+|+| +|.+|+.++..|+..|+ + ++.++|.+
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv-~-----~i~ivD~d 32 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGV-G-----KITLIDFD 32 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC-C-----EEEEEcCC
Confidence 689999 79999999999999886 3 79999865
No 457
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.47 E-value=0.05 Score=48.88 Aligned_cols=67 Identities=24% Similarity=0.342 Sum_probs=42.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEE-EEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l-~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
++||+|+|++|.+|..++..+....- .++ .++|.+. ++.... .. ..+...+++.+.++++|
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~------~elvav~d~~~--~~~~~~----~~------~~i~~~~dl~~ll~~~D 62 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAED------LELVAAVDRPG--SPLVGQ----GA------LGVAITDDLEAVLADAD 62 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCC--cccccc----CC------CCccccCCHHHhccCCC
Confidence 37999999669999999987765321 244 4577653 222211 11 12234457777788899
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+||.+.
T Consensus 63 vVid~t 68 (257)
T PRK00048 63 VLIDFT 68 (257)
T ss_pred EEEECC
Confidence 998664
No 458
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.47 E-value=0.041 Score=46.51 Aligned_cols=66 Identities=20% Similarity=0.113 Sum_probs=44.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.||+.++..|..-|+ +|..+|...... . ...+.. + ...++++.++.||
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~--~----~~~~~~------~-~~~~l~ell~~aD 93 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLKAFGM-------RVIGYDRSPKPE--E----GADEFG------V-EYVSLDELLAQAD 93 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHHHTT--------EEEEEESSCHHH--H----HHHHTT------E-EESSHHHHHHH-S
T ss_pred CCCEEEEEE-EcCCcCeEeeeeecCCc-------eeEEecccCChh--h----hccccc------c-eeeehhhhcchhh
Confidence 357999999 89999999999986554 899999864211 1 011111 1 1237888999999
Q ss_pred EEEEeCC
Q 022227 84 IAVMVGG 90 (300)
Q Consensus 84 vVi~~ag 90 (300)
+|+++.-
T Consensus 94 iv~~~~p 100 (178)
T PF02826_consen 94 IVSLHLP 100 (178)
T ss_dssp EEEE-SS
T ss_pred hhhhhhc
Confidence 9999753
No 459
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=95.46 E-value=0.12 Score=49.55 Aligned_cols=66 Identities=18% Similarity=0.110 Sum_probs=44.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
...+|+|+| .|.+|..++..+...|. +++.+|.++ .++....+ +.. .. .+..++++++|
T Consensus 194 ~Gk~VvViG-~G~IG~~vA~~ak~~Ga-------~ViV~d~dp--~r~~~A~~---~G~-------~v-~~leeal~~aD 252 (406)
T TIGR00936 194 AGKTVVVAG-YGWCGKGIAMRARGMGA-------RVIVTEVDP--IRALEAAM---DGF-------RV-MTMEEAAKIGD 252 (406)
T ss_pred CcCEEEEEC-CCHHHHHHHHHHhhCcC-------EEEEEeCCh--hhHHHHHh---cCC-------Ee-CCHHHHHhcCC
Confidence 356999999 79999999998886654 688898864 22211111 111 11 13467889999
Q ss_pred EEEEeCC
Q 022227 84 IAVMVGG 90 (300)
Q Consensus 84 vVi~~ag 90 (300)
+||.+.|
T Consensus 253 VVItaTG 259 (406)
T TIGR00936 253 IFITATG 259 (406)
T ss_pred EEEECCC
Confidence 9988644
No 460
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.44 E-value=0.17 Score=44.11 Aligned_cols=35 Identities=29% Similarity=0.524 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
+..||+|+| +|.+|+.++..|+..|+ + ++.|+|.+
T Consensus 27 ~~~~V~ViG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAG-AGGLGSNIAVALARSGV-G-----NLKLVDFD 61 (212)
T ss_pred hCCCEEEEC-cCHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 356899999 79999999999998886 3 68999876
No 461
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.43 E-value=0.21 Score=43.96 Aligned_cols=78 Identities=22% Similarity=0.293 Sum_probs=48.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCc--hhh---hhhhhhhhhhhccCCcccEEEeCChhhh
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--AEA---LNGVKMELVDAAFPLLKGVVATTDAVEA 78 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~--~~~---l~g~~~dl~~~~~~~~~~v~~~~~~~~a 78 (300)
+..||+|+| +|..|..++..|...|+- ..++.++|++.. .++ +.....++.+.. .. .. ...++.++
T Consensus 24 ~~~rvlvlG-AGgAg~aiA~~L~~~G~~----~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~-~~-~~--~~~~l~~~ 94 (226)
T cd05311 24 EEVKIVING-AGAAGIAIARLLLAAGAK----PENIVVVDSKGVIYEGREDDLNPDKNEIAKET-NP-EK--TGGTLKEA 94 (226)
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHcCcC----cceEEEEeCCCccccccchhhhHHHHHHHHHh-cc-Cc--ccCCHHHH
Confidence 346999999 699999999999887652 115999998721 111 221222222211 00 11 11256688
Q ss_pred cCCCcEEEEeCC
Q 022227 79 CTGVNIAVMVGG 90 (300)
Q Consensus 79 ~~~aDvVi~~ag 90 (300)
++++|++|-+-+
T Consensus 95 l~~~dvlIgaT~ 106 (226)
T cd05311 95 LKGADVFIGVSR 106 (226)
T ss_pred HhcCCEEEeCCC
Confidence 999999988754
No 462
>PRK08818 prephenate dehydrogenase; Provisional
Probab=95.36 E-value=0.18 Score=47.69 Aligned_cols=56 Identities=14% Similarity=0.164 Sum_probs=40.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.+||+|||.+|-+|.+++..|.+.. + .+|+-+|... .. ..+..+.+++||+
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~--~----~~V~g~D~~d--------------~~---------~~~~~~~v~~aDl 54 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRM--Q----LEVIGHDPAD--------------PG---------SLDPATLLQRADV 54 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC--C----CEEEEEcCCc--------------cc---------cCCHHHHhcCCCE
Confidence 4799999955999999999998641 2 2688888631 00 1245677899999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
||++.
T Consensus 55 Vilav 59 (370)
T PRK08818 55 LIFSA 59 (370)
T ss_pred EEEeC
Confidence 99984
No 463
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=95.31 E-value=0.12 Score=48.24 Aligned_cols=92 Identities=21% Similarity=0.165 Sum_probs=62.5
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCcccEEEeCC-----
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTD----- 74 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~~~v~~~~~----- 74 (300)
|+....-++|.||+||.|..+...++....+. ...+.+-.++ +++|+.....+..... .+...+.+..|
T Consensus 1 M~~~~yDvVIyGASGfTG~yivee~v~~~~~~---~~slavAGRn--~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~ 75 (423)
T KOG2733|consen 1 MAAIRYDVVIYGASGFTGKYIVEEAVSSQVFE---GLSLAVAGRN--EKKLQEVLEKVGEKTGTDLSSSVILIADSANEA 75 (423)
T ss_pred CCCceeeEEEEccccccceeeHHHHhhhhccc---CceEEEecCC--HHHHHHHHHHHhhccCCCcccceEEEecCCCHH
Confidence 54556679999999999999999998754432 1267788775 4777755444444332 12223333223
Q ss_pred -hhhhcCCCcEEEEeCCCCCCCCC
Q 022227 75 -AVEACTGVNIAVMVGGFPRKEGM 97 (300)
Q Consensus 75 -~~~a~~~aDvVi~~ag~~~~~g~ 97 (300)
+.+-++.|-+|+.|+|+-|..|+
T Consensus 76 Sl~emak~~~vivN~vGPyR~hGE 99 (423)
T KOG2733|consen 76 SLDEMAKQARVIVNCVGPYRFHGE 99 (423)
T ss_pred HHHHHHhhhEEEEeccccceecCc
Confidence 66778899999999999887665
No 464
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=95.30 E-value=0.19 Score=45.26 Aligned_cols=84 Identities=14% Similarity=0.116 Sum_probs=53.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEE-EEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhh-cCCC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-CTGV 82 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~-L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a-~~~a 82 (300)
.+||+|+| .|.+|..++..|..+.. .+.++. ++|... ++.+. +.+. ....+++.+. ....
T Consensus 2 ~~rvgiIG-~GaIG~~va~~l~~~~~----~~~~l~~V~~~~~--~~~~~----~~~~-------~~~~~~l~~ll~~~~ 63 (267)
T PRK13301 2 THRIAFIG-LGAIASDVAAGLLADAA----QPCQLAALTRNAA--DLPPA----LAGR-------VALLDGLPGLLAWRP 63 (267)
T ss_pred ceEEEEEC-ccHHHHHHHHHHhcCCC----CceEEEEEecCCH--HHHHH----hhcc-------CcccCCHHHHhhcCC
Confidence 46999999 79999999998876432 123443 455532 22222 2211 1133456553 4789
Q ss_pred cEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcC
Q 022227 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122 (300)
Q Consensus 83 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~ 122 (300)
|+||-+|+. ..++++++.+-+.+.
T Consensus 64 DlVVE~A~~----------------~av~e~~~~iL~~g~ 87 (267)
T PRK13301 64 DLVVEAAGQ----------------QAIAEHAEGCLTAGL 87 (267)
T ss_pred CEEEECCCH----------------HHHHHHHHHHHhcCC
Confidence 999999863 566788888877654
No 465
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.29 E-value=0.097 Score=45.19 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=29.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~ 46 (300)
+.++|+|+| .|.+|++++..|...|. +|+.+|.++
T Consensus 27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~-------~Vvv~D~~~ 61 (200)
T cd01075 27 EGKTVAVQG-LGKVGYKLAEHLLEEGA-------KLIVADINE 61 (200)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEcCCH
Confidence 457999999 79999999999998774 788999863
No 466
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.28 E-value=0.11 Score=49.50 Aligned_cols=76 Identities=13% Similarity=0.205 Sum_probs=53.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhc-ccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~-~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
...+++|+| +|..+...+..++.- .-+. +|.++|+++ ++++..+.++.+.. +...++....+.++++++|
T Consensus 154 da~~l~iiG-~G~QA~~~l~a~~~v~~~i~-----~V~v~~r~~--~~a~~f~~~~~~~~-~~~~~v~~~~s~~eav~~A 224 (379)
T PRK06199 154 DSKVVGLLG-PGVMGKTILAAFMAVCPGID-----TIKIKGRGQ--KSLDSFATWVAETY-PQITNVEVVDSIEEVVRGS 224 (379)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhcCCcc-----EEEEECCCH--HHHHHHHHHHHHhc-CCCceEEEeCCHHHHHcCC
Confidence 457899999 799999888777652 1122 799999964 56666655554321 1112466677899999999
Q ss_pred cEEEEe
Q 022227 83 NIAVMV 88 (300)
Q Consensus 83 DvVi~~ 88 (300)
|+|+.+
T Consensus 225 DIVvta 230 (379)
T PRK06199 225 DIVTYC 230 (379)
T ss_pred CEEEEc
Confidence 998864
No 467
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.20 E-value=0.055 Score=50.10 Aligned_cols=65 Identities=12% Similarity=0.041 Sum_probs=42.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.+||+||| .|.+|.+++..|...|+ +++..+... .+.++. +... .+... +..+++++||+
T Consensus 3 ~kkIgiIG-~G~mG~AiA~~L~~sG~-------~Viv~~~~~-~~~~~~----a~~~------Gv~~~-s~~ea~~~ADi 62 (314)
T TIGR00465 3 GKTVAIIG-YGSQGHAQALNLRDSGL-------NVIVGLRKG-GASWKK----ATED------GFKVG-TVEEAIPQADL 62 (314)
T ss_pred cCEEEEEe-EcHHHHHHHHHHHHCCC-------eEEEEECcC-hhhHHH----HHHC------CCEEC-CHHHHHhcCCE
Confidence 46899999 79999999999998764 455544432 122211 1111 11222 46778899999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
|+++.
T Consensus 63 VvLaV 67 (314)
T TIGR00465 63 IMNLL 67 (314)
T ss_pred EEEeC
Confidence 99985
No 468
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.19 E-value=0.1 Score=43.53 Aligned_cols=57 Identities=19% Similarity=0.256 Sum_probs=40.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+.++|+|+|.+..+|..++..|..++. .+.+.+... .++.+.++.||
T Consensus 35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~a-------tVt~~h~~T--------------------------~~l~~~~~~AD 81 (160)
T PF02882_consen 35 EGKKVVVVGRSNIVGKPLAMLLLNKGA-------TVTICHSKT--------------------------KNLQEITRRAD 81 (160)
T ss_dssp TT-EEEEE-TTTTTHHHHHHHHHHTT--------EEEEE-TTS--------------------------SSHHHHHTTSS
T ss_pred CCCEEEEECCcCCCChHHHHHHHhCCC-------eEEeccCCC--------------------------Ccccceeeecc
Confidence 457999999888899999999988763 577765431 15567789999
Q ss_pred EEEEeCCCCC
Q 022227 84 IAVMVGGFPR 93 (300)
Q Consensus 84 vVi~~ag~~~ 93 (300)
+||.++|.|.
T Consensus 82 IVVsa~G~~~ 91 (160)
T PF02882_consen 82 IVVSAVGKPN 91 (160)
T ss_dssp EEEE-SSSTT
T ss_pred EEeeeecccc
Confidence 9999988763
No 469
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=95.09 E-value=0.066 Score=50.18 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=20.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhc
Q 022227 6 VRVLVTGAAGQIGYALVPMIARG 28 (300)
Q Consensus 6 ~kV~IiGAaG~vG~~la~~L~~~ 28 (300)
+||+|+||+|.+|..++..|...
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~ 25 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH 25 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC
Confidence 79999999999999999888754
No 470
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=95.08 E-value=0.23 Score=46.50 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=35.5
Q ss_pred HHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEEEe
Q 022227 18 GYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMV 88 (300)
Q Consensus 18 G~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi~~ 88 (300)
|..++..|+..|. +|+++|.++ +.++....+... ...+...++..+++++||+||++
T Consensus 32 G~~MA~~La~aG~-------~V~v~Dr~~--~~l~~~~~~~l~-----~~Gi~~asd~~eaa~~ADvVIla 88 (342)
T PRK12557 32 GSRMAIEFAEAGH-------DVVLAEPNR--SILSEELWKKVE-----DAGVKVVSDDAEAAKHGEIHILF 88 (342)
T ss_pred HHHHHHHHHhCCC-------eEEEEECCH--HHhhHHHHHHHH-----HCCCEEeCCHHHHHhCCCEEEEE
Confidence 6778888877664 799999864 222111111111 11234556777889999999998
No 471
>PLN00015 protochlorophyllide reductase
Probab=95.06 E-value=0.49 Score=43.31 Aligned_cols=116 Identities=10% Similarity=0.031 Sum_probs=61.4
Q ss_pred EEEcCCChHHHHHHHHHHhcc-cCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccC---CcccEEEeCChh-------h
Q 022227 9 LVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV-------E 77 (300)
Q Consensus 9 ~IiGAaG~vG~~la~~L~~~~-~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~---~~~~v~~~~~~~-------~ 77 (300)
+||||++.+|..++..|+..| . .+++.+.++ ++++....++...... ...++.-..+.. +
T Consensus 1 lITGas~GIG~aia~~l~~~G~~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 71 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW-------HVVMACRDF--LKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRR 71 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC-------EEEEEeCCH--HHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence 489999999999999999877 4 688887653 3333222222110000 000000000111 1
Q ss_pred hcCCCcEEEEeCCCCCC----CCCcHH---HHHHhhHHH----HHHHHHHHhhhcCCCeEEEEecCc
Q 022227 78 ACTGVNIAVMVGGFPRK----EGMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~----~g~~r~---dl~~~N~~i----~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
.....|++|+.||.... ...+.. ..+..|+.. ++.+.+.+.+......+||++|+-
T Consensus 72 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~ 138 (308)
T PLN00015 72 SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSI 138 (308)
T ss_pred cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecc
Confidence 12457999999987421 122332 345566544 555566665542102467777653
No 472
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.02 E-value=0.1 Score=43.46 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=41.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.++++|+| -|.+|+.+|..|...|. .+...|+++ ...+++. + |. +.+. ..+++++.+|+
T Consensus 23 Gk~vvV~G-YG~vG~g~A~~lr~~Ga-------~V~V~e~DP-i~alqA~-~---dG-------f~v~-~~~~a~~~adi 81 (162)
T PF00670_consen 23 GKRVVVIG-YGKVGKGIARALRGLGA-------RVTVTEIDP-IRALQAA-M---DG-------FEVM-TLEEALRDADI 81 (162)
T ss_dssp TSEEEEE---SHHHHHHHHHHHHTT--------EEEEE-SSH-HHHHHHH-H---TT--------EEE--HHHHTTT-SE
T ss_pred CCEEEEeC-CCcccHHHHHHHhhCCC-------EEEEEECCh-HHHHHhh-h---cC-------cEec-CHHHHHhhCCE
Confidence 46899999 79999999999988774 789999975 2222221 1 11 1222 57889999999
Q ss_pred EEEeCCC
Q 022227 85 AVMVGGF 91 (300)
Q Consensus 85 Vi~~ag~ 91 (300)
+|.+-|.
T Consensus 82 ~vtaTG~ 88 (162)
T PF00670_consen 82 FVTATGN 88 (162)
T ss_dssp EEE-SSS
T ss_pred EEECCCC
Confidence 8876543
No 473
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.99 E-value=0.18 Score=45.73 Aligned_cols=74 Identities=11% Similarity=0.089 Sum_probs=48.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+..+++|+| +|.+|..++..|...|.. +|.+++++. ++++..+.++.... .+....+..+.+.++|
T Consensus 122 ~~k~vlVlG-aGg~a~ai~~aL~~~g~~------~V~v~~R~~--~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~D 187 (278)
T PRK00258 122 KGKRILILG-AGGAARAVILPLLDLGVA------EITIVNRTV--ERAEELAKLFGALG-----KAELDLELQEELADFD 187 (278)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCC------EEEEEeCCH--HHHHHHHHHhhhcc-----ceeecccchhccccCC
Confidence 346899999 699999999999987642 799998863 55544433332111 1112113446778999
Q ss_pred EEEEeCCC
Q 022227 84 IAVMVGGF 91 (300)
Q Consensus 84 vVi~~ag~ 91 (300)
+||.+-..
T Consensus 188 ivInaTp~ 195 (278)
T PRK00258 188 LIINATSA 195 (278)
T ss_pred EEEECCcC
Confidence 99997533
No 474
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=94.98 E-value=0.064 Score=50.22 Aligned_cols=71 Identities=21% Similarity=0.363 Sum_probs=42.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcEEE
Q 022227 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (300)
Q Consensus 7 kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDvVi 86 (300)
||+|+||+|.+|..++..|...+. ...+++++....+ .+....+.. ..+.+..-..++++++|+||
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~h----p~~~l~~~as~~~----~g~~~~~~~------~~~~~~~~~~~~~~~~D~v~ 66 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNF----PIDKLVLLASDRS----AGRKVTFKG------KELEVNEAKIESFEGIDIAL 66 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCC----ChhhEEEEecccc----CCCeeeeCC------eeEEEEeCChHHhcCCCEEE
Confidence 689999999999999998877542 1125666644321 112111111 12222222245679999999
Q ss_pred EeCCC
Q 022227 87 MVGGF 91 (300)
Q Consensus 87 ~~ag~ 91 (300)
++.|.
T Consensus 67 ~a~g~ 71 (339)
T TIGR01296 67 FSAGG 71 (339)
T ss_pred ECCCH
Confidence 98753
No 475
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.92 E-value=1.8 Score=39.87 Aligned_cols=33 Identities=15% Similarity=0.263 Sum_probs=27.0
Q ss_pred CCCCcEEEEEcC--CChHHHHHHHHHHhcccCCCCCCeEEEE
Q 022227 2 AKEPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHM 41 (300)
Q Consensus 2 ~~~~~kV~IiGA--aG~vG~~la~~L~~~~~~~~~~~~~l~L 41 (300)
+.+.+.+.|||| +.-||..++..|+..|. +|++
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga-------~Vv~ 40 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGA-------EILV 40 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-------EEEE
Confidence 445678999998 58899999999998874 6777
No 476
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=94.90 E-value=0.38 Score=42.15 Aligned_cols=30 Identities=37% Similarity=0.378 Sum_probs=25.6
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhccc
Q 022227 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVM 30 (300)
Q Consensus 1 m~~~~~kV~IiGAaG~vG~~la~~L~~~~~ 30 (300)
|.++.++|.||||++-+|..++..|+..|.
T Consensus 1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~ 30 (251)
T COG1028 1 MDLSGKVALVTGASSGIGRAIARALAREGA 30 (251)
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC
Confidence 455678999999999999999999997764
No 477
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.89 E-value=0.27 Score=44.85 Aligned_cols=117 Identities=17% Similarity=0.168 Sum_probs=69.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhh--ccCCcccEEE-------eCCh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--AFPLLKGVVA-------TTDA 75 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~--~~~~~~~v~~-------~~~~ 75 (300)
...|.||||.+-+|..++.++++++- .++|.|++++ -.+..+..+.+. ...+..+++- -...
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~-------~~vl~Din~~--~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGA-------KLVLWDINKQ--GNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCC-------eEEEEecccc--chHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHH
Confidence 45799999888899999999998874 6999999752 111122222211 0000001100 0124
Q ss_pred hhhcCCCcEEEEeCCCCC-CC--CCcHHH---HHHhh----HHHHHHHHHHHhhhcCCCeEEEEecC
Q 022227 76 VEACTGVNIAVMVGGFPR-KE--GMERKD---VMSKN----VSIYKAQASALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 76 ~~a~~~aDvVi~~ag~~~-~~--g~~r~d---l~~~N----~~i~~~i~~~i~~~~~~~~~viv~sN 132 (300)
++...+.|++|.-||+-. ++ ..++++ .++.| .-.++...+.+.+... .-+|.+++
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~--GHIV~IaS 173 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNN--GHIVTIAS 173 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCC--ceEEEehh
Confidence 556778999999999743 22 223332 23344 4567888899988753 44666554
No 478
>PLN02494 adenosylhomocysteinase
Probab=94.85 E-value=0.2 Score=48.82 Aligned_cols=90 Identities=14% Similarity=0.189 Sum_probs=55.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
..+|+|+| .|.+|..++..+...|. .|+.+|+++. ..+++. .+.. . . .+..++++.+|+
T Consensus 254 GKtVvViG-yG~IGr~vA~~aka~Ga-------~VIV~e~dp~-r~~eA~----~~G~-~------v-v~leEal~~ADV 312 (477)
T PLN02494 254 GKVAVICG-YGDVGKGCAAAMKAAGA-------RVIVTEIDPI-CALQAL----MEGY-Q------V-LTLEDVVSEADI 312 (477)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCch-hhHHHH----hcCC-e------e-ccHHHHHhhCCE
Confidence 47899999 79999999999876654 6888888641 111211 1111 0 1 135678899999
Q ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCc
Q 022227 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (300)
Q Consensus 85 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP 133 (300)
||.+.|... . +..+ .+... ++++++++++.+
T Consensus 313 VI~tTGt~~---v-----------I~~e---~L~~M-K~GAiLiNvGr~ 343 (477)
T PLN02494 313 FVTTTGNKD---I-----------IMVD---HMRKM-KNNAIVCNIGHF 343 (477)
T ss_pred EEECCCCcc---c-----------hHHH---HHhcC-CCCCEEEEcCCC
Confidence 998654321 0 0122 23333 346789999875
No 479
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.83 E-value=0.1 Score=47.82 Aligned_cols=56 Identities=20% Similarity=0.342 Sum_probs=44.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+|.+|.||..++..|+..|. ++.+++... .++.+.++.||
T Consensus 158 ~Gk~V~vIG~s~ivG~PmA~~L~~~ga-------tVtv~~~~t--------------------------~~l~e~~~~AD 204 (301)
T PRK14194 158 TGKHAVVIGRSNIVGKPMAALLLQAHC-------SVTVVHSRS--------------------------TDAKALCRQAD 204 (301)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEECCCC--------------------------CCHHHHHhcCC
Confidence 457999999656999999999998775 788886531 14567789999
Q ss_pred EEEEeCCCC
Q 022227 84 IAVMVGGFP 92 (300)
Q Consensus 84 vVi~~ag~~ 92 (300)
+||.+.|.+
T Consensus 205 IVIsavg~~ 213 (301)
T PRK14194 205 IVVAAVGRP 213 (301)
T ss_pred EEEEecCCh
Confidence 999998765
No 480
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=94.82 E-value=0.099 Score=44.19 Aligned_cols=102 Identities=13% Similarity=0.146 Sum_probs=60.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchh-----hhhhhhhhhhhhccCCcccEEEeCChhh
Q 022227 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-----ALNGVKMELVDAAFPLLKGVVATTDAVE 77 (300)
Q Consensus 3 ~~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~-----~l~g~~~dl~~~~~~~~~~v~~~~~~~~ 77 (300)
|.++...|.||+|-.|.-+...+++.+.|+ .++++-+.+-.+ .+.-...|++.. +++.+
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FS-----KV~~i~RR~~~d~at~k~v~q~~vDf~Kl-----------~~~a~ 79 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFS-----KVYAILRRELPDPATDKVVAQVEVDFSKL-----------SQLAT 79 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccce-----eEEEEEeccCCCccccceeeeEEechHHH-----------HHHHh
Confidence 344678899999999999999999999887 566665432101 111112233222 25667
Q ss_pred hcCCCcEEEEeCCCCCC-CCCcHHHHHHhhHHHHHHHHHHHhhhcC
Q 022227 78 ACTGVNIAVMVGGFPRK-EGMERKDVMSKNVSIYKAQASALEQHAA 122 (300)
Q Consensus 78 a~~~aDvVi~~ag~~~~-~g~~r~dl~~~N~~i~~~i~~~i~~~~~ 122 (300)
++.+-|+.|++-|..|. .|-+. ..+..-..+...++..++.+-
T Consensus 80 ~~qg~dV~FcaLgTTRgkaGadg--fykvDhDyvl~~A~~AKe~Gc 123 (238)
T KOG4039|consen 80 NEQGPDVLFCALGTTRGKAGADG--FYKVDHDYVLQLAQAAKEKGC 123 (238)
T ss_pred hhcCCceEEEeecccccccccCc--eEeechHHHHHHHHHHHhCCC
Confidence 88999999998777663 33221 111122333455666665543
No 481
>KOG4777 consensus Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.80 E-value=0.046 Score=48.59 Aligned_cols=79 Identities=11% Similarity=0.165 Sum_probs=44.6
Q ss_pred cEEE-EEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCC-chhhhhhhhhhhhhhc-cC-CcccEEEeCChhhhcCC
Q 022227 6 VRVL-VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACTG 81 (300)
Q Consensus 6 ~kV~-IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~-~~~~l~g~~~dl~~~~-~~-~~~~v~~~~~~~~a~~~ 81 (300)
+|++ |.||+|.||+.....|....+| ++.++.-.. +..+--+.+....+.. .| ..+.+++..-..+.|++
T Consensus 4 kk~a~vlGaTGaVGQrFi~lLsdhP~f------~ikvLgAS~RSAGK~ya~a~~wkqt~~lp~~~~e~~V~ec~~~~F~e 77 (361)
T KOG4777|consen 4 KKSAPVLGATGAVGQRFISLLSDHPYF------SIKVLGASKRSAGKRYAFAGNWKQTDLLPESAHEYTVEECTADSFNE 77 (361)
T ss_pred ccccceeeccchhHHHHHHHhccCCcc------eeeeecccccccCCceEecccchhcccccchhhhhhHhhcChhhccc
Confidence 4677 9999999999999888877665 466664321 1111111111111111 11 12344444344566999
Q ss_pred CcEEEEeCC
Q 022227 82 VNIAVMVGG 90 (300)
Q Consensus 82 aDvVi~~ag 90 (300)
||+|+..++
T Consensus 78 cDIvfsgld 86 (361)
T KOG4777|consen 78 CDIVFSGLD 86 (361)
T ss_pred ccEEEecCC
Confidence 999998653
No 482
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.78 E-value=0.27 Score=43.79 Aligned_cols=35 Identities=34% Similarity=0.567 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
+..||+|+| +|.+|+.++..|+..|+ + ++.++|.+
T Consensus 31 ~~~~VliiG-~GglGs~va~~La~~Gv-g-----~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVG-LGGLGCAASQYLAAAGV-G-----TLTLVDFD 65 (245)
T ss_pred cCCeEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCC
Confidence 346999999 69999999999999885 4 78999864
No 483
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.77 E-value=0.16 Score=41.41 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=43.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+.++|+|+|.+..+|..++..|.+++. ++.+.+.+. .+..+++++||
T Consensus 27 ~gk~v~VvGrs~~vG~pla~lL~~~ga-------tV~~~~~~t--------------------------~~l~~~v~~AD 73 (140)
T cd05212 27 DGKKVLVVGRSGIVGAPLQCLLQRDGA-------TVYSCDWKT--------------------------IQLQSKVHDAD 73 (140)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeCCCC--------------------------cCHHHHHhhCC
Confidence 567999999888999999998887654 677776431 14567889999
Q ss_pred EEEEeCCCC
Q 022227 84 IAVMVGGFP 92 (300)
Q Consensus 84 vVi~~ag~~ 92 (300)
+||.+.|.+
T Consensus 74 IVvsAtg~~ 82 (140)
T cd05212 74 VVVVGSPKP 82 (140)
T ss_pred EEEEecCCC
Confidence 999988765
No 484
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=94.73 E-value=0.13 Score=49.85 Aligned_cols=123 Identities=23% Similarity=0.232 Sum_probs=67.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCch----hhhhhhhh-hhhhhc---cC-CcccEE-----
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA----EALNGVKM-ELVDAA---FP-LLKGVV----- 70 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~----~~l~g~~~-dl~~~~---~~-~~~~v~----- 70 (300)
.+.|.||||+||+|.-+...|+..- ++-. .|.|+=+.+.. +++++... ++.+.. .+ ...++.
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~---p~v~-~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTT---PDVK-RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcC---cCcc-eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 4689999999999999998887542 0111 56665443221 22222111 111100 00 001111
Q ss_pred -------Ee-CChhhhcCCCcEEEEeCCCCCCCCCcHHH-HHHhhHHHHHHHHHHHhhhcCCCeEEEEecCchh
Q 022227 71 -------AT-TDAVEACTGVNIAVMVGGFPRKEGMERKD-VMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (300)
Q Consensus 71 -------~~-~~~~~a~~~aDvVi~~ag~~~~~g~~r~d-l~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~ 135 (300)
+. +|...-++..|+|||+|+..+..+ +.+ -+..|....+++.+.+++.- .....+..+++.
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde--~l~~al~iNt~Gt~~~l~lak~~~--~l~~~vhVSTAy 157 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFDE--PLDVALGINTRGTRNVLQLAKEMV--KLKALVHVSTAY 157 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeeccch--hhhhhhhhhhHhHHHHHHHHHHhh--hhheEEEeehhh
Confidence 11 234445678899999987665322 222 24568888888888777663 345555555543
No 485
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=94.72 E-value=0.16 Score=48.29 Aligned_cols=61 Identities=20% Similarity=0.220 Sum_probs=43.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.||+.++..|..-|+ ++..+|.... + .+ +.. ...++++.++.||
T Consensus 115 ~gktvGIIG-~G~IG~~vA~~l~a~G~-------~V~~~dp~~~-~--~~------~~~--------~~~~L~ell~~sD 169 (378)
T PRK15438 115 HDRTVGIVG-VGNVGRRLQARLEALGI-------KTLLCDPPRA-D--RG------DEG--------DFRSLDELVQEAD 169 (378)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCccc-c--cc------ccc--------ccCCHHHHHhhCC
Confidence 457999999 89999999999886664 7899986321 0 00 000 0126788889999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|++..
T Consensus 170 iI~lh~ 175 (378)
T PRK15438 170 ILTFHT 175 (378)
T ss_pred EEEEeC
Confidence 998764
No 486
>PLN02928 oxidoreductase family protein
Probab=94.72 E-value=0.12 Score=48.46 Aligned_cols=75 Identities=17% Similarity=0.121 Sum_probs=45.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhcc-CCcccEEEeCChhhhcCCCc
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~-~~~~~v~~~~~~~~a~~~aD 83 (300)
.++|+|+| .|.||+.++..|..-|+ +|..+|.....+.. ....+..... ..........++++.++.||
T Consensus 159 gktvGIiG-~G~IG~~vA~~l~afG~-------~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aD 228 (347)
T PLN02928 159 GKTVFILG-YGAIGIELAKRLRPFGV-------KLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEAD 228 (347)
T ss_pred CCEEEEEC-CCHHHHHHHHHHhhCCC-------EEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCC
Confidence 47999999 89999999999886554 78889875211100 0000000000 00000001236889999999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|+++.
T Consensus 229 iVvl~l 234 (347)
T PLN02928 229 IVVLCC 234 (347)
T ss_pred EEEECC
Confidence 999975
No 487
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.70 E-value=0.089 Score=48.89 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=28.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
++||+|+||+|+.|.-+...|.... .+|+.++...
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp------~ve~~~~ss~ 36 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHP------DVELILISSR 36 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCC------CeEEEEeech
Confidence 5799999999999999998888653 2477777653
No 488
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.66 E-value=0.22 Score=49.52 Aligned_cols=64 Identities=17% Similarity=0.094 Sum_probs=44.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.||+.++..|..-|+ +++.+|.....+. ..++ .+... ++.+.++.||
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~~----~~~~---------g~~~~-~l~ell~~aD 196 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKAFGM-------KVIAYDPYISPER----AAQL---------GVELV-SLDELLARAD 196 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCChhH----HHhc---------CCEEE-cHHHHHhhCC
Confidence 357999999 89999999999886554 7899997432111 1111 11122 6788899999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|+++.
T Consensus 197 iV~l~l 202 (526)
T PRK13581 197 FITLHT 202 (526)
T ss_pred EEEEcc
Confidence 999975
No 489
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=94.65 E-value=0.07 Score=51.06 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=46.6
Q ss_pred CCcEEEEEcC----------------CChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhh-hhhhhhhhccCCc
Q 022227 4 EPVRVLVTGA----------------AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-VKMELVDAAFPLL 66 (300)
Q Consensus 4 ~~~kV~IiGA----------------aG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g-~~~dl~~~~~~~~ 66 (300)
+.++|.|||| +|.+|..++..|..+|. +|++++.+.+.+...+ ...|+.+... .
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga-------~V~~v~~~~~~~~~~~~~~~dv~~~~~-~- 257 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA-------DVTLVSGPVNLPTPAGVKRIDVESAQE-M- 257 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC-------EEEEeCCCccccCCCCcEEEccCCHHH-H-
Confidence 4579999998 89999999999999875 7888887531110000 0111111110 0
Q ss_pred ccEEEeCChhhhcCCCcEEEEeCCCCC
Q 022227 67 KGVVATTDAVEACTGVNIAVMVGGFPR 93 (300)
Q Consensus 67 ~~v~~~~~~~~a~~~aDvVi~~ag~~~ 93 (300)
.....+.+...|++|++||+..
T Consensus 258 -----~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 258 -----LDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred -----HHHHHHhcCCCCEEEEcccccc
Confidence 0011233567999999999753
No 490
>PLN02858 fructose-bisphosphate aldolase
Probab=94.58 E-value=0.25 Score=54.52 Aligned_cols=97 Identities=13% Similarity=0.232 Sum_probs=0.0
Q ss_pred CCCCC-cEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhc
Q 022227 1 MAKEP-VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (300)
Q Consensus 1 m~~~~-~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~ 79 (300)
|+.++ ++|++|| .|.+|..++..|+..|+ ++..+|+. ......+.+.. .....+..+++
T Consensus 319 ~~~~~~~~IGfIG-lG~MG~~mA~~L~~~G~-------~V~v~dr~------~~~~~~l~~~G------a~~~~s~~e~~ 378 (1378)
T PLN02858 319 MQAKPVKRIGFIG-LGAMGFGMASHLLKSNF-------SVCGYDVY------KPTLVRFENAG------GLAGNSPAEVA 378 (1378)
T ss_pred ccccCCCeEEEEC-chHHHHHHHHHHHHCCC-------EEEEEeCC------HHHHHHHHHcC------CeecCCHHHHH
Q ss_pred CCCcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHH---HHHhhhcCCCeEEEEecC
Q 022227 80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQA---SALEQHAAPNCKVLVVAN 132 (300)
Q Consensus 80 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~---~~i~~~~~~~~~viv~sN 132 (300)
++||+||++ -.+-..++++. ..+.....++..+|..|+
T Consensus 379 ~~aDvVi~~---------------V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~ST 419 (1378)
T PLN02858 379 KDVDVLVIM---------------VANEVQAENVLFGDLGAVSALPAGASIVLSST 419 (1378)
T ss_pred hcCCEEEEe---------------cCChHHHHHHHhchhhHHhcCCCCCEEEECCC
No 491
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=94.58 E-value=0.13 Score=44.24 Aligned_cols=78 Identities=9% Similarity=0.091 Sum_probs=48.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
+.++|+|+|.+.-||..++..|++++. .+.++|++....+..+. .+.|...+. . ..+.++.+.++.||
T Consensus 61 ~GK~vvVIGrS~iVGkPla~lL~~~~A-------tVti~~~~~~~~~~~~~--~~~hs~t~~-~--~~~~~l~~~~~~AD 128 (197)
T cd01079 61 YGKTITIINRSEVVGRPLAALLANDGA-------RVYSVDINGIQVFTRGE--SIRHEKHHV-T--DEEAMTLDCLSQSD 128 (197)
T ss_pred CCCEEEEECCCccchHHHHHHHHHCCC-------EEEEEecCccccccccc--ccccccccc-c--chhhHHHHHhhhCC
Confidence 457999999888999999999988763 78899875311100100 011111000 0 00112567789999
Q ss_pred EEEEeCCCCC
Q 022227 84 IAVMVGGFPR 93 (300)
Q Consensus 84 vVi~~ag~~~ 93 (300)
+||.+.|.+.
T Consensus 129 IVIsAvG~~~ 138 (197)
T cd01079 129 VVITGVPSPN 138 (197)
T ss_pred EEEEccCCCC
Confidence 9999988764
No 492
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=94.58 E-value=0.18 Score=48.00 Aligned_cols=61 Identities=15% Similarity=0.109 Sum_probs=43.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
..++|+|+| .|.||+.++..|..-|+ ++..+|.... ... ... ...++.+.++.||
T Consensus 115 ~gktvGIIG-~G~IG~~va~~l~a~G~-------~V~~~Dp~~~--~~~-------~~~--------~~~~l~ell~~aD 169 (381)
T PRK00257 115 AERTYGVVG-AGHVGGRLVRVLRGLGW-------KVLVCDPPRQ--EAE-------GDG--------DFVSLERILEECD 169 (381)
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEECCccc--ccc-------cCc--------cccCHHHHHhhCC
Confidence 357999999 89999999999887664 7999987421 111 000 0125778889999
Q ss_pred EEEEeC
Q 022227 84 IAVMVG 89 (300)
Q Consensus 84 vVi~~a 89 (300)
+|++..
T Consensus 170 iV~lh~ 175 (381)
T PRK00257 170 VISLHT 175 (381)
T ss_pred EEEEeC
Confidence 998864
No 493
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=94.58 E-value=0.16 Score=44.85 Aligned_cols=161 Identities=17% Similarity=0.253 Sum_probs=90.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhh-hh-h--hhhhhhhhccCCcccEEEeCChhhhc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA-LN-G--VKMELVDAAFPLLKGVVATTDAVEAC 79 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~-l~-g--~~~dl~~~~~~~~~~v~~~~~~~~a~ 79 (300)
++.||.|+|+.|+.|..+|..|..+ +|.+ .+.|-|+.+-.+. ++ | ...|+.|.. ++.+-.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~--yGs~---~VILSDI~KPp~~V~~~GPyIy~DILD~K-----------~L~eIV 106 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYM--YGSE---CVILSDIVKPPANVTDVGPYIYLDILDQK-----------SLEEIV 106 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHH--hCCc---cEehhhccCCchhhcccCCchhhhhhccc-----------cHHHhh
Confidence 4679999999999999999887643 3422 5888888531111 11 1 223333322 222222
Q ss_pred --CCCcEEEEeCCCCCCCCCcHHHH-HHhhHHHHHHHHHHHhhhcCCCeEEEEecCchhhHHHHHHHH-CCC--C-CCCc
Q 022227 80 --TGVNIAVMVGGFPRKEGMERKDV-MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF-APS--I-PAKN 152 (300)
Q Consensus 80 --~~aDvVi~~ag~~~~~g~~r~dl-~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~~~~~~~~~~~-~~~--~-p~~~ 152 (300)
+-.|..||....-..-|+..-.| ...|+..+.++.+..+++ +.++.|-| ........--+. .|. + .++.
T Consensus 107 Vn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~---kL~iFVPS-TIGAFGPtSPRNPTPdltIQRPRT 182 (366)
T KOG2774|consen 107 VNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH---KLKVFVPS-TIGAFGPTSPRNPTPDLTIQRPRT 182 (366)
T ss_pred cccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc---CeeEeecc-cccccCCCCCCCCCCCeeeecCce
Confidence 23567777422211123322222 356999999999999888 34454422 221111000000 011 1 1245
Q ss_pred EEeeehhhHHHHHHHHHHHcCCCCCCeEEEEE
Q 022227 153 ITCLTRLDHNRALGQISEKLNVQVSDVKNVII 184 (300)
Q Consensus 153 i~~~t~ld~~R~~~~la~~l~v~~~~V~~~~V 184 (300)
|+|.++...+-+-..+-.++|++.+..+..-+
T Consensus 183 IYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~ 214 (366)
T KOG2774|consen 183 IYGVSKVHAELLGEYFNHRFGVDFRSMRFPGI 214 (366)
T ss_pred eechhHHHHHHHHHHHHhhcCccceecccCcc
Confidence 89999988777777888899999888874433
No 494
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=94.53 E-value=0.085 Score=52.35 Aligned_cols=136 Identities=15% Similarity=0.207 Sum_probs=76.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHh-----cccCCCCCCeEEEEEecCCchhhhhhhhhh-hhhhccCCcccEEEeCChhhh
Q 022227 5 PVRVLVTGAAGQIGYALVPMIAR-----GVMLGTDQPVILHMLDIPPAAEALNGVKME-LVDAAFPLLKGVVATTDAVEA 78 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~-----~~~~~~~~~~~l~L~D~~~~~~~l~g~~~d-l~~~~~~~~~~v~~~~~~~~a 78 (300)
..||++.| +|..|..++..|+. .|+-.++-...+.++|.+. .+....-| +.+...++........++.++
T Consensus 321 d~riv~~G-AGsAgigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~G---Li~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 396 (581)
T PLN03129 321 DQRILFAG-AGEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKG---LVTKSRKDSLQPFKKPFAHDHEPGASLLEA 396 (581)
T ss_pred hceEEEEC-CCHHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCC---eEeCCCCccChHHHHHHHhhcccCCCHHHH
Confidence 36999999 79999999988876 3442111112689999753 11100011 211111111111123579999
Q ss_pred cCC--CcEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEecCch---hhHHHHHHHHCCCCCCCcE
Q 022227 79 CTG--VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA---NTNALILKEFAPSIPAKNI 153 (300)
Q Consensus 79 ~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~~~viv~sNP~---~~~~~~~~~~~~~~p~~~i 153 (300)
+++ +|+.|=+.+.+ | -+.+++++.|.++++ ..+|.-.|||. .....-+.+...| +--|
T Consensus 397 v~~vkptvLIG~S~~~---g-----------~Ft~evi~~Ma~~~~-rPIIFaLSNPt~~~E~~pe~a~~~T~G--~ai~ 459 (581)
T PLN03129 397 VKAIKPTVLIGLSGVG---G-----------TFTKEVLEAMASLNE-RPIIFALSNPTSKAECTAEEAYTWTGG--RAIF 459 (581)
T ss_pred HhccCCCEEEEecCCC---C-----------CCCHHHHHHHHhcCC-CCEEEECCCCCCCcCcCHHHHHHhhcC--CEEE
Confidence 999 89887765433 2 123577888888886 46788889996 4455555554111 1124
Q ss_pred EeeehhhH
Q 022227 154 TCLTRLDH 161 (300)
Q Consensus 154 ~~~t~ld~ 161 (300)
.+|+-.+.
T Consensus 460 AtGSPf~p 467 (581)
T PLN03129 460 ASGSPFDP 467 (581)
T ss_pred EeCCCCCC
Confidence 55655443
No 495
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.52 E-value=0.15 Score=42.90 Aligned_cols=55 Identities=16% Similarity=0.286 Sum_probs=41.2
Q ss_pred CCcEEEEEcCCCh-HHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCC
Q 022227 4 EPVRVLVTGAAGQ-IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (300)
Q Consensus 4 ~~~kV~IiGAaG~-vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~a 82 (300)
+..||+|+| +|. +|..++..|...+. ++.+.+... .++.+.+++|
T Consensus 43 ~gk~vlViG-~G~~~G~~~a~~L~~~g~-------~V~v~~r~~--------------------------~~l~~~l~~a 88 (168)
T cd01080 43 AGKKVVVVG-RSNIVGKPLAALLLNRNA-------TVTVCHSKT--------------------------KNLKEHTKQA 88 (168)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhhCCC-------EEEEEECCc--------------------------hhHHHHHhhC
Confidence 457999999 576 58889999887664 577776531 1456778999
Q ss_pred cEEEEeCCCC
Q 022227 83 NIAVMVGGFP 92 (300)
Q Consensus 83 DvVi~~ag~~ 92 (300)
|+||.+-+.+
T Consensus 89 DiVIsat~~~ 98 (168)
T cd01080 89 DIVIVAVGKP 98 (168)
T ss_pred CEEEEcCCCC
Confidence 9999987655
No 496
>PRK06046 alanine dehydrogenase; Validated
Probab=94.49 E-value=0.21 Score=46.40 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=48.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCc
Q 022227 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (300)
Q Consensus 4 ~~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aD 83 (300)
.+.+|+|+| +|..|...+..+....-+. ++.++|+++ ++++..+.++.+. ....+....+..++++ +|
T Consensus 128 ~~~~vgiiG-~G~qa~~h~~al~~~~~i~-----~v~v~~r~~--~~~~~~~~~~~~~---~~~~v~~~~~~~~~l~-aD 195 (326)
T PRK06046 128 DSKVVGIIG-AGNQARTQLLALSEVFDLE-----EVRVYDRTK--SSAEKFVERMSSV---VGCDVTVAEDIEEACD-CD 195 (326)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhhCCce-----EEEEECCCH--HHHHHHHHHHHhh---cCceEEEeCCHHHHhh-CC
Confidence 457899999 7999999887776432111 789999864 5555444444321 1123455567777786 99
Q ss_pred EEEEe
Q 022227 84 IAVMV 88 (300)
Q Consensus 84 vVi~~ 88 (300)
+|+++
T Consensus 196 iVv~a 200 (326)
T PRK06046 196 ILVTT 200 (326)
T ss_pred EEEEe
Confidence 98875
No 497
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.47 E-value=0.24 Score=44.67 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=45.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.++++|+| +|.+|..++..|+..+. ++.++|++. ++++..+.++.... .+...+.....+.++|+
T Consensus 117 ~k~vliiG-aGg~g~aia~~L~~~g~-------~v~v~~R~~--~~~~~la~~~~~~~-----~~~~~~~~~~~~~~~Di 181 (270)
T TIGR00507 117 NQRVLIIG-AGGAARAVALPLLKADC-------NVIIANRTV--SKAEELAERFQRYG-----EIQAFSMDELPLHRVDL 181 (270)
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhhcC-----ceEEechhhhcccCccE
Confidence 46899999 69999999999987653 688888753 44444333332211 11111112234568999
Q ss_pred EEEeCCC
Q 022227 85 AVMVGGF 91 (300)
Q Consensus 85 Vi~~ag~ 91 (300)
||.+.+.
T Consensus 182 vInatp~ 188 (270)
T TIGR00507 182 IINATSA 188 (270)
T ss_pred EEECCCC
Confidence 9998654
No 498
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=94.46 E-value=0.47 Score=40.83 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=29.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecC
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~ 45 (300)
..||+|+| +|.+|+.++..|+..|+ + ++.++|.+
T Consensus 19 ~s~VlviG-~gglGsevak~L~~~GV-g-----~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIG-AGALGAEIAKNLVLAGI-D-----SITIVDHR 52 (198)
T ss_pred hCcEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEECC
Confidence 46999999 68899999999999886 3 78999865
No 499
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=94.46 E-value=0.082 Score=48.31 Aligned_cols=67 Identities=13% Similarity=0.109 Sum_probs=44.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
..+|+|+| .|.+|..++..|...|. ++.++|+++ +++.. ..+. .. ..+ ...++.+.++++|+
T Consensus 151 gk~v~IiG-~G~iG~avA~~L~~~G~-------~V~v~~R~~--~~~~~-~~~~--g~----~~~-~~~~l~~~l~~aDi 212 (287)
T TIGR02853 151 GSNVMVLG-FGRTGMTIARTFSALGA-------RVFVGARSS--ADLAR-ITEM--GL----IPF-PLNKLEEKVAEIDI 212 (287)
T ss_pred CCEEEEEc-ChHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH-HHHC--CC----eee-cHHHHHHHhccCCE
Confidence 46999999 79999999999987664 688998863 22211 1110 00 001 11245677899999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
||.+.
T Consensus 213 Vint~ 217 (287)
T TIGR02853 213 VINTI 217 (287)
T ss_pred EEECC
Confidence 99975
No 500
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=94.43 E-value=0.19 Score=49.95 Aligned_cols=64 Identities=20% Similarity=0.116 Sum_probs=44.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhcccCCCCCCeEEEEEecCCchhhhhhhhhhhhhhccCCcccEEEeCChhhhcCCCcE
Q 022227 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (300)
Q Consensus 5 ~~kV~IiGAaG~vG~~la~~L~~~~~~~~~~~~~l~L~D~~~~~~~l~g~~~dl~~~~~~~~~~v~~~~~~~~a~~~aDv 84 (300)
.++|+|+| .|.||+.++..|..-|+ ++..+|.....+. ..++ .+...+++.+.+++||+
T Consensus 138 gktvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~~----~~~~---------g~~~~~~l~ell~~aDv 196 (525)
T TIGR01327 138 GKTLGVIG-LGRIGSIVAKRAKAFGM-------KVLAYDPYISPER----AEQL---------GVELVDDLDELLARADF 196 (525)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCChhH----HHhc---------CCEEcCCHHHHHhhCCE
Confidence 46999999 89999999999886554 7899997421111 1111 11222367888999999
Q ss_pred EEEeC
Q 022227 85 AVMVG 89 (300)
Q Consensus 85 Vi~~a 89 (300)
|+++.
T Consensus 197 V~l~l 201 (525)
T TIGR01327 197 ITVHT 201 (525)
T ss_pred EEEcc
Confidence 99875
Done!