Query 022233
Match_columns 300
No_of_seqs 276 out of 2129
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 16:06:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022233.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022233hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 4.8E-64 1.6E-68 469.8 29.0 278 13-300 25-307 (345)
2 4dgs_A Dehydrogenase; structur 100.0 1.3E-64 4.3E-69 472.8 21.6 275 14-300 28-302 (340)
3 4e5n_A Thermostable phosphite 100.0 3E-61 1E-65 449.2 25.1 274 15-300 1-288 (330)
4 3k5p_A D-3-phosphoglycerate de 100.0 3.6E-60 1.2E-64 451.7 28.7 272 15-300 14-293 (416)
5 3kb6_A D-lactate dehydrogenase 100.0 2.1E-61 7.1E-66 450.9 18.0 232 62-300 41-290 (334)
6 1sc6_A PGDH, D-3-phosphoglycer 100.0 2E-59 6.9E-64 447.3 28.6 271 16-300 4-282 (404)
7 3jtm_A Formate dehydrogenase, 100.0 1.5E-59 5E-64 440.6 24.2 257 37-300 36-301 (351)
8 3hg7_A D-isomer specific 2-hyd 100.0 7.4E-60 2.5E-64 438.0 20.1 268 13-300 2-275 (324)
9 4hy3_A Phosphoglycerate oxidor 100.0 4.1E-59 1.4E-63 438.9 21.5 273 15-300 26-310 (365)
10 2pi1_A D-lactate dehydrogenase 100.0 1E-59 3.6E-64 439.4 16.9 270 18-300 2-290 (334)
11 3gg9_A D-3-phosphoglycerate de 100.0 2.3E-58 8E-63 432.8 26.0 281 17-300 3-296 (352)
12 3ba1_A HPPR, hydroxyphenylpyru 100.0 3.7E-58 1.3E-62 428.8 26.6 277 12-300 18-295 (333)
13 3evt_A Phosphoglycerate dehydr 100.0 6.4E-59 2.2E-63 432.1 19.3 262 17-300 2-272 (324)
14 2yq5_A D-isomer specific 2-hyd 100.0 3E-58 1E-62 430.3 17.9 273 17-300 2-294 (343)
15 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 2.5E-57 8.5E-62 423.3 23.9 269 16-300 26-299 (335)
16 1mx3_A CTBP1, C-terminal bindi 100.0 9.8E-57 3.3E-61 421.2 27.8 289 5-300 10-305 (347)
17 1wwk_A Phosphoglycerate dehydr 100.0 6.2E-57 2.1E-61 416.6 25.7 270 15-300 2-277 (307)
18 2cuk_A Glycerate dehydrogenase 100.0 2.5E-56 8.6E-61 413.1 29.3 271 17-300 1-273 (311)
19 1gdh_A D-glycerate dehydrogena 100.0 1.5E-56 5.1E-61 416.3 27.8 274 17-300 2-282 (320)
20 1xdw_A NAD+-dependent (R)-2-hy 100.0 1.9E-56 6.3E-61 417.4 23.0 272 18-300 2-293 (331)
21 3pp8_A Glyoxylate/hydroxypyruv 100.0 9.9E-57 3.4E-61 416.1 20.8 260 15-300 2-274 (315)
22 2j6i_A Formate dehydrogenase; 100.0 1.5E-56 5.1E-61 422.7 21.1 275 15-300 16-307 (364)
23 1dxy_A D-2-hydroxyisocaproate 100.0 1.2E-56 4.2E-61 418.9 20.2 271 18-300 2-291 (333)
24 1j4a_A D-LDH, D-lactate dehydr 100.0 3.3E-56 1.1E-60 416.0 21.5 270 18-300 3-293 (333)
25 2nac_A NAD-dependent formate d 100.0 1.3E-55 4.4E-60 418.8 25.2 238 57-300 83-328 (393)
26 2ekl_A D-3-phosphoglycerate de 100.0 1.4E-55 4.8E-60 408.5 24.2 265 18-300 7-279 (313)
27 2w2k_A D-mandelate dehydrogena 100.0 3E-54 1E-58 405.1 24.6 278 15-300 2-300 (348)
28 2gcg_A Glyoxylate reductase/hy 100.0 8.3E-54 2.8E-58 399.5 26.6 279 11-300 3-291 (330)
29 2d0i_A Dehydrogenase; structur 100.0 5.1E-54 1.7E-58 401.2 23.9 271 15-300 1-280 (333)
30 2dbq_A Glyoxylate reductase; D 100.0 8.2E-54 2.8E-58 400.1 24.2 275 15-300 1-284 (334)
31 3oet_A Erythronate-4-phosphate 100.0 8.3E-54 2.8E-58 403.8 20.8 245 16-297 3-251 (381)
32 1qp8_A Formate dehydrogenase; 100.0 1.7E-53 5.7E-58 392.8 20.4 252 18-300 2-256 (303)
33 1ygy_A PGDH, D-3-phosphoglycer 100.0 2.2E-52 7.5E-57 412.0 28.0 270 15-300 3-276 (529)
34 3gvx_A Glycerate dehydrogenase 100.0 9.2E-53 3.2E-57 385.0 23.1 221 60-300 31-251 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 1.1E-50 3.9E-55 383.1 19.3 243 18-299 2-249 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 5.9E-32 2E-36 261.4 -1.4 189 83-300 191-390 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 5.5E-32 1.9E-36 262.5 -2.7 186 84-300 212-407 (494)
38 3d4o_A Dipicolinate synthase s 100.0 1.4E-29 4.7E-34 232.0 9.9 206 16-260 5-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 3.4E-26 1.2E-30 210.0 10.6 212 16-260 7-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.8 2.9E-22 9.9E-27 194.8 -0.4 177 84-287 209-393 (494)
41 2vhw_A Alanine dehydrogenase; 99.8 5.6E-21 1.9E-25 180.8 5.5 199 62-299 66-293 (377)
42 1x13_A NAD(P) transhydrogenase 99.8 2E-18 6.9E-23 164.4 11.6 188 64-263 73-301 (401)
43 3h9u_A Adenosylhomocysteinase; 99.7 1.5E-17 5.1E-22 158.5 10.1 179 63-269 122-312 (436)
44 1l7d_A Nicotinamide nucleotide 99.7 7E-17 2.4E-21 152.9 10.9 195 60-262 64-302 (384)
45 3n58_A Adenosylhomocysteinase; 99.7 1.7E-16 5.9E-21 151.1 10.4 157 85-268 183-347 (464)
46 2eez_A Alanine dehydrogenase; 99.6 2E-16 6.8E-21 149.0 7.3 204 60-299 63-291 (369)
47 1gtm_A Glutamate dehydrogenase 99.6 1.5E-17 5.2E-22 158.8 -4.1 126 164-300 206-336 (419)
48 3gvp_A Adenosylhomocysteinase 99.6 2.9E-15 9.8E-20 142.4 9.2 156 85-267 156-319 (435)
49 4gbj_A 6-phosphogluconate dehy 99.5 1.5E-14 5.1E-19 132.4 10.6 110 170-281 6-120 (297)
50 3obb_A Probable 3-hydroxyisobu 99.5 5.1E-15 1.7E-19 135.7 7.4 111 170-282 4-121 (300)
51 3l6d_A Putative oxidoreductase 99.5 6E-14 2E-18 128.7 6.9 112 165-276 5-121 (306)
52 4dll_A 2-hydroxy-3-oxopropiona 99.4 1E-13 3.5E-18 127.9 7.9 112 166-277 28-145 (320)
53 3doj_A AT3G25530, dehydrogenas 99.4 1.3E-13 4.3E-18 126.7 8.3 112 165-276 17-135 (310)
54 3qha_A Putative oxidoreductase 99.4 1.9E-13 6.4E-18 124.8 9.1 107 169-277 15-126 (296)
55 3qsg_A NAD-binding phosphogluc 99.4 3.5E-13 1.2E-17 123.9 11.0 136 142-287 3-150 (312)
56 4e21_A 6-phosphogluconate dehy 99.4 4.1E-13 1.4E-17 125.9 10.7 117 167-285 20-144 (358)
57 3pef_A 6-phosphogluconate dehy 99.4 2.1E-13 7.2E-18 123.6 8.3 107 170-276 2-115 (287)
58 1gpj_A Glutamyl-tRNA reductase 99.4 6.9E-15 2.4E-19 140.1 -2.4 165 84-256 80-266 (404)
59 3pdu_A 3-hydroxyisobutyrate de 99.4 2.3E-13 7.8E-18 123.4 6.5 107 170-276 2-115 (287)
60 3g0o_A 3-hydroxyisobutyrate de 99.4 2.8E-13 9.5E-18 123.9 4.9 108 169-276 7-122 (303)
61 2h78_A Hibadh, 3-hydroxyisobut 99.3 1.3E-12 4.6E-17 119.0 7.4 107 170-276 4-117 (302)
62 4ezb_A Uncharacterized conserv 99.3 3.6E-12 1.2E-16 117.5 9.4 115 169-287 24-152 (317)
63 4gwg_A 6-phosphogluconate dehy 99.3 6.4E-12 2.2E-16 122.0 10.3 115 169-284 4-131 (484)
64 2d5c_A AROE, shikimate 5-dehyd 99.3 2.9E-12 1E-16 114.8 7.0 174 52-275 42-223 (263)
65 3dtt_A NADP oxidoreductase; st 99.3 4E-12 1.4E-16 112.8 5.7 90 164-256 14-124 (245)
66 2zyd_A 6-phosphogluconate dehy 99.2 1.3E-11 4.6E-16 119.9 8.8 110 166-276 12-133 (480)
67 1yb4_A Tartronic semialdehyde 99.2 2E-11 7E-16 110.4 9.0 105 170-275 4-115 (295)
68 1vpd_A Tartronate semialdehyde 99.2 1.7E-11 6E-16 111.1 8.1 106 170-275 6-118 (299)
69 3cky_A 2-hydroxymethyl glutara 99.2 2.8E-11 9.7E-16 109.8 9.2 107 169-275 4-117 (301)
70 1c1d_A L-phenylalanine dehydro 99.2 2.8E-11 9.7E-16 112.9 8.6 103 166-276 172-280 (355)
71 4dio_A NAD(P) transhydrogenase 99.2 1.6E-10 5.5E-15 109.5 13.8 97 166-263 187-321 (405)
72 2p4q_A 6-phosphogluconate dehy 99.2 5.4E-11 1.8E-15 116.1 10.3 107 169-276 10-129 (497)
73 2gf2_A Hibadh, 3-hydroxyisobut 99.2 3.2E-11 1.1E-15 109.2 7.9 104 170-273 1-111 (296)
74 2hk9_A Shikimate dehydrogenase 99.2 2.6E-11 8.8E-16 109.5 6.1 176 51-275 52-236 (275)
75 2uyy_A N-PAC protein; long-cha 99.2 5.9E-11 2E-15 108.7 8.5 107 169-275 30-143 (316)
76 3ggo_A Prephenate dehydrogenas 99.2 5.7E-11 2E-15 109.4 8.4 105 166-272 30-144 (314)
77 2pv7_A T-protein [includes: ch 99.1 1.3E-10 4.3E-15 106.1 10.3 91 169-269 21-112 (298)
78 3p2y_A Alanine dehydrogenase/p 99.1 5.3E-11 1.8E-15 111.9 7.7 181 64-262 85-310 (381)
79 2cvz_A Dehydrogenase, 3-hydrox 99.1 5.3E-11 1.8E-15 107.2 7.4 103 170-275 2-109 (289)
80 2pgd_A 6-phosphogluconate dehy 99.1 1.1E-10 3.6E-15 113.6 9.3 112 170-282 3-127 (482)
81 2iz1_A 6-phosphogluconate dehy 99.1 6.2E-11 2.1E-15 115.0 7.4 112 170-282 6-129 (474)
82 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.1 8.1E-11 2.8E-15 114.3 7.3 108 170-278 2-125 (478)
83 4e12_A Diketoreductase; oxidor 99.1 1.7E-10 5.8E-15 104.4 8.9 112 170-284 5-146 (283)
84 2g5c_A Prephenate dehydrogenas 99.1 1.6E-10 5.4E-15 104.0 7.6 102 170-273 2-113 (281)
85 3fr7_A Putative ketol-acid red 99.1 2E-10 6.8E-15 110.5 7.3 91 165-258 49-156 (525)
86 1i36_A Conserved hypothetical 99.0 1.7E-10 5.9E-15 102.8 6.2 98 170-273 1-105 (264)
87 1np3_A Ketol-acid reductoisome 99.0 1.8E-10 6.2E-15 107.0 6.4 90 165-256 12-107 (338)
88 2yjz_A Metalloreductase steap4 98.6 2.1E-11 7.3E-16 105.2 0.0 90 167-261 17-110 (201)
89 2raf_A Putative dinucleotide-b 99.0 5.2E-10 1.8E-14 96.8 8.6 80 165-260 15-94 (209)
90 3ond_A Adenosylhomocysteinase; 99.0 5.4E-10 1.9E-14 107.9 9.5 148 85-259 201-355 (488)
91 2q3e_A UDP-glucose 6-dehydroge 99.0 2.8E-10 9.5E-15 110.2 5.4 119 170-290 6-166 (467)
92 3d1l_A Putative NADP oxidoredu 99.0 2.1E-10 7.2E-15 102.4 4.1 98 164-263 5-109 (266)
93 3b1f_A Putative prephenate deh 99.0 5.2E-10 1.8E-14 101.1 6.0 102 169-272 6-117 (290)
94 3ktd_A Prephenate dehydrogenas 99.0 3.2E-10 1.1E-14 105.5 4.2 99 169-270 8-115 (341)
95 3k6j_A Protein F01G10.3, confi 98.9 2.1E-09 7.3E-14 103.5 9.9 154 115-284 12-191 (460)
96 2dpo_A L-gulonate 3-dehydrogen 98.9 5.4E-10 1.8E-14 103.1 5.2 113 169-284 6-148 (319)
97 3pid_A UDP-glucose 6-dehydroge 98.9 2.2E-09 7.6E-14 102.7 8.4 109 164-275 31-172 (432)
98 1zej_A HBD-9, 3-hydroxyacyl-CO 98.9 7.7E-10 2.6E-14 100.9 4.7 110 167-284 10-132 (293)
99 2f1k_A Prephenate dehydrogenas 98.9 1.7E-09 5.8E-14 97.0 6.7 99 170-271 1-106 (279)
100 2izz_A Pyrroline-5-carboxylate 98.9 4.2E-09 1.5E-13 96.9 9.2 102 167-272 20-132 (322)
101 3gg2_A Sugar dehydrogenase, UD 98.9 6.8E-09 2.3E-13 100.0 10.2 102 170-272 3-138 (450)
102 1y81_A Conserved hypothetical 98.9 5.6E-09 1.9E-13 84.7 8.1 103 167-276 12-118 (138)
103 4a7p_A UDP-glucose dehydrogena 98.9 1.5E-08 5.3E-13 97.4 12.3 103 170-273 9-146 (446)
104 3gt0_A Pyrroline-5-carboxylate 98.9 2.2E-09 7.5E-14 95.0 5.8 99 170-272 3-111 (247)
105 1leh_A Leucine dehydrogenase; 98.8 2.4E-09 8.3E-14 100.3 6.0 103 166-276 170-279 (364)
106 2rcy_A Pyrroline carboxylate r 98.8 1.5E-08 5E-13 90.0 10.5 99 169-273 4-106 (262)
107 3c24_A Putative oxidoreductase 98.8 2.3E-09 8E-14 96.8 5.2 88 170-260 12-105 (286)
108 3oj0_A Glutr, glutamyl-tRNA re 98.8 2E-09 6.8E-14 87.3 4.3 86 168-259 20-113 (144)
109 2ahr_A Putative pyrroline carb 98.8 7.6E-09 2.6E-13 91.8 8.0 96 170-273 4-105 (259)
110 1f0y_A HCDH, L-3-hydroxyacyl-C 98.8 6.7E-09 2.3E-13 94.6 7.2 112 170-284 16-161 (302)
111 2vns_A Metalloreductase steap3 98.8 2.7E-09 9.2E-14 92.7 4.4 90 168-262 27-121 (215)
112 1mv8_A GMD, GDP-mannose 6-dehy 98.8 1.1E-08 3.7E-13 98.1 8.9 102 170-272 1-140 (436)
113 3tri_A Pyrroline-5-carboxylate 98.8 2.6E-08 9E-13 89.9 10.6 106 169-278 3-119 (280)
114 2i99_A MU-crystallin homolog; 98.8 4.2E-09 1.4E-13 96.7 4.5 105 168-281 134-248 (312)
115 2duw_A Putative COA-binding pr 98.8 8.5E-09 2.9E-13 84.3 5.7 103 169-278 13-121 (145)
116 2dc1_A L-aspartate dehydrogena 98.7 4E-08 1.4E-12 86.3 9.2 98 170-275 1-103 (236)
117 1pjc_A Protein (L-alanine dehy 98.7 5E-08 1.7E-12 91.2 10.4 180 63-257 66-268 (361)
118 1yqg_A Pyrroline-5-carboxylate 98.7 7.3E-09 2.5E-13 92.0 4.3 95 170-273 1-103 (263)
119 1jay_A Coenzyme F420H2:NADP+ o 98.7 1.2E-08 4E-13 87.7 4.6 112 170-288 1-137 (212)
120 2y0c_A BCEC, UDP-glucose dehyd 98.7 4E-08 1.4E-12 95.4 8.7 103 169-272 8-144 (478)
121 1bg6_A N-(1-D-carboxylethyl)-L 98.6 4.3E-08 1.5E-12 90.6 7.8 101 170-273 5-125 (359)
122 1dlj_A UDP-glucose dehydrogena 98.6 5.8E-08 2E-12 92.2 8.8 101 170-273 1-134 (402)
123 3g79_A NDP-N-acetyl-D-galactos 98.6 6.6E-08 2.2E-12 93.7 9.3 100 169-269 18-160 (478)
124 1x0v_A GPD-C, GPDH-C, glycerol 98.6 5.7E-08 2E-12 89.9 8.3 90 169-260 8-128 (354)
125 1ks9_A KPA reductase;, 2-dehyd 98.6 5.1E-08 1.7E-12 87.3 7.7 88 170-259 1-100 (291)
126 3mog_A Probable 3-hydroxybutyr 98.6 1.6E-08 5.3E-13 98.3 4.4 114 169-287 5-148 (483)
127 1txg_A Glycerol-3-phosphate de 98.6 6.1E-08 2.1E-12 88.9 7.7 100 170-272 1-124 (335)
128 1yj8_A Glycerol-3-phosphate de 98.6 3.6E-08 1.2E-12 92.4 6.2 88 170-259 22-144 (375)
129 2o3j_A UDP-glucose 6-dehydroge 98.6 5.5E-08 1.9E-12 94.4 7.4 104 170-274 10-154 (481)
130 3ojo_A CAP5O; rossmann fold, c 98.6 7.2E-08 2.5E-12 92.2 8.0 106 167-272 9-145 (431)
131 3k96_A Glycerol-3-phosphate de 98.6 7.1E-08 2.4E-12 90.2 7.1 93 169-263 29-140 (356)
132 3don_A Shikimate dehydrogenase 98.6 8.4E-08 2.9E-12 86.6 7.2 105 166-275 114-227 (277)
133 4huj_A Uncharacterized protein 98.6 3.7E-08 1.3E-12 85.7 4.6 103 169-275 23-144 (220)
134 3dfu_A Uncharacterized protein 98.6 7.3E-08 2.5E-12 84.7 6.3 70 169-256 6-75 (232)
135 1b0a_A Protein (fold bifunctio 98.6 1.4E-07 4.9E-12 85.1 8.2 80 164-259 154-234 (288)
136 1evy_A Glycerol-3-phosphate de 98.5 1.7E-08 5.9E-13 94.1 1.9 90 171-261 17-129 (366)
137 3p2o_A Bifunctional protein fo 98.5 2.1E-07 7.2E-12 83.9 8.8 80 164-259 155-235 (285)
138 4a26_A Putative C-1-tetrahydro 98.5 1.9E-07 6.5E-12 84.8 8.4 80 164-259 160-242 (300)
139 1z82_A Glycerol-3-phosphate de 98.5 4.4E-08 1.5E-12 90.4 4.3 96 169-271 14-127 (335)
140 3ngx_A Bifunctional protein fo 98.5 2.3E-07 8E-12 83.2 8.7 77 167-259 148-225 (276)
141 3l07_A Bifunctional protein fo 98.5 2.4E-07 8.1E-12 83.6 8.7 80 164-259 156-236 (285)
142 1edz_A 5,10-methylenetetrahydr 98.5 1.8E-07 6.1E-12 86.0 8.0 92 164-261 172-280 (320)
143 2c2x_A Methylenetetrahydrofola 98.5 2.3E-07 7.7E-12 83.5 8.4 81 164-260 153-236 (281)
144 1zcj_A Peroxisomal bifunctiona 98.5 8.6E-08 2.9E-12 92.6 6.0 112 169-284 37-175 (463)
145 1a4i_A Methylenetetrahydrofola 98.5 4.7E-07 1.6E-11 82.2 10.0 82 164-261 160-242 (301)
146 2ew2_A 2-dehydropantoate 2-red 98.5 8.2E-08 2.8E-12 86.9 5.1 104 170-276 4-127 (316)
147 4a5o_A Bifunctional protein fo 98.5 3.8E-07 1.3E-11 82.2 9.3 80 164-259 156-236 (286)
148 2egg_A AROE, shikimate 5-dehyd 98.4 2.2E-07 7.5E-12 84.7 6.6 105 166-275 138-257 (297)
149 3u62_A Shikimate dehydrogenase 98.4 2.9E-07 1E-11 82.0 6.9 99 167-273 107-214 (253)
150 1wdk_A Fatty oxidation complex 98.4 1E-07 3.5E-12 96.8 4.2 112 169-284 314-454 (715)
151 2wtb_A MFP2, fatty acid multif 98.3 2.7E-07 9.1E-12 93.8 4.9 111 170-284 313-452 (725)
152 1iuk_A Hypothetical protein TT 98.3 1.8E-06 6.1E-11 70.0 8.5 102 168-276 12-119 (140)
153 2d59_A Hypothetical protein PH 98.3 2.7E-06 9.1E-11 69.2 9.3 103 169-278 22-128 (144)
154 3phh_A Shikimate dehydrogenase 98.3 4.8E-07 1.6E-11 81.3 5.0 102 169-275 118-225 (269)
155 2qyt_A 2-dehydropantoate 2-red 98.3 2.8E-07 9.6E-12 83.6 2.9 101 170-274 9-134 (317)
156 3ulk_A Ketol-acid reductoisome 98.3 7.6E-07 2.6E-11 84.4 5.8 90 166-259 34-134 (491)
157 2i76_A Hypothetical protein; N 98.2 7.2E-08 2.5E-12 86.7 -1.8 84 170-261 3-94 (276)
158 3i83_A 2-dehydropantoate 2-red 98.2 4.3E-06 1.5E-10 76.5 9.9 104 170-276 3-124 (320)
159 3hdj_A Probable ornithine cycl 98.2 4.4E-06 1.5E-10 76.6 9.7 83 169-259 121-216 (313)
160 2g1u_A Hypothetical protein TM 98.2 5.6E-06 1.9E-10 67.5 9.0 94 164-259 14-121 (155)
161 3c85_A Putative glutathione-re 98.2 6.8E-07 2.3E-11 74.9 3.1 91 165-257 35-140 (183)
162 2z2v_A Hypothetical protein PH 98.2 8.8E-07 3E-11 83.0 3.8 104 166-276 13-127 (365)
163 1x7d_A Ornithine cyclodeaminas 98.2 3.3E-06 1.1E-10 78.7 7.4 87 168-258 128-228 (350)
164 3hn2_A 2-dehydropantoate 2-red 98.1 5.2E-06 1.8E-10 75.7 8.1 105 170-278 3-124 (312)
165 2qrj_A Saccharopine dehydrogen 98.1 2.5E-06 8.4E-11 80.4 5.9 83 168-256 213-300 (394)
166 1vl6_A Malate oxidoreductase; 98.1 1.2E-05 4.2E-10 75.3 10.5 92 164-260 187-298 (388)
167 1lss_A TRK system potassium up 98.1 4.2E-06 1.4E-10 66.1 5.9 85 169-255 4-102 (140)
168 3hwr_A 2-dehydropantoate 2-red 98.1 4.9E-06 1.7E-10 76.2 7.0 100 167-271 17-134 (318)
169 3ghy_A Ketopantoate reductase 98.1 1.8E-06 6E-11 79.6 3.8 87 169-258 3-106 (335)
170 3ic5_A Putative saccharopine d 98.0 5.8E-06 2E-10 63.3 5.6 95 168-268 4-111 (118)
171 3fwz_A Inner membrane protein 98.0 3.1E-06 1.1E-10 68.0 4.2 86 169-256 7-105 (140)
172 3c7a_A Octopine dehydrogenase; 98.0 4.5E-06 1.6E-10 78.7 4.8 84 170-255 3-115 (404)
173 1omo_A Alanine dehydrogenase; 98.0 1.5E-05 5E-10 73.3 8.1 83 168-258 124-219 (322)
174 3ado_A Lambda-crystallin; L-gu 98.0 8.8E-06 3E-10 74.8 6.5 117 169-288 6-152 (319)
175 3o8q_A Shikimate 5-dehydrogena 98.0 3.3E-06 1.1E-10 76.3 3.6 104 166-274 123-237 (281)
176 4fgw_A Glycerol-3-phosphate de 97.9 1.8E-05 6.1E-10 74.6 7.7 87 171-259 36-154 (391)
177 2ewd_A Lactate dehydrogenase,; 97.9 1E-05 3.5E-10 74.0 5.9 100 169-270 4-135 (317)
178 1p77_A Shikimate 5-dehydrogena 97.9 5.4E-06 1.8E-10 74.3 3.9 105 166-273 116-231 (272)
179 2hmt_A YUAA protein; RCK, KTN, 97.9 9.1E-06 3.1E-10 64.4 4.7 91 167-259 4-107 (144)
180 3uuw_A Putative oxidoreductase 97.9 1.6E-05 5.4E-10 72.1 6.5 102 169-275 6-118 (308)
181 4b4u_A Bifunctional protein fo 97.9 4.1E-05 1.4E-09 69.3 9.1 79 164-258 174-253 (303)
182 3pwz_A Shikimate dehydrogenase 97.9 2.2E-05 7.5E-10 70.5 7.0 105 165-273 116-231 (272)
183 1tlt_A Putative oxidoreductase 97.9 5.6E-05 1.9E-09 68.8 9.7 102 170-276 6-118 (319)
184 1nyt_A Shikimate 5-dehydrogena 97.8 2E-05 6.7E-10 70.6 6.1 105 166-275 116-231 (271)
185 3g17_A Similar to 2-dehydropan 97.8 2.8E-06 9.5E-11 76.9 0.5 91 170-262 3-102 (294)
186 3llv_A Exopolyphosphatase-rela 97.8 1.1E-05 3.6E-10 64.5 3.8 86 168-255 5-103 (141)
187 4hkt_A Inositol 2-dehydrogenas 97.8 2.7E-05 9.3E-10 71.3 6.7 100 170-275 4-115 (331)
188 3jyo_A Quinate/shikimate dehyd 97.8 4.6E-05 1.6E-09 68.8 8.1 104 166-273 124-245 (283)
189 3euw_A MYO-inositol dehydrogen 97.8 2.4E-05 8.2E-10 72.0 6.1 101 170-275 5-117 (344)
190 3db2_A Putative NADPH-dependen 97.8 3.9E-05 1.3E-09 71.0 7.1 66 170-235 6-81 (354)
191 3vtf_A UDP-glucose 6-dehydroge 97.8 2.7E-05 9.3E-10 74.5 6.0 103 168-270 20-158 (444)
192 3evn_A Oxidoreductase, GFO/IDH 97.8 0.00012 4E-09 67.1 10.1 64 170-233 6-80 (329)
193 3e9m_A Oxidoreductase, GFO/IDH 97.7 4.1E-05 1.4E-09 70.2 6.9 102 169-275 5-119 (330)
194 1j5p_A Aspartate dehydrogenase 97.7 0.00012 4E-09 65.0 9.4 101 167-276 10-114 (253)
195 1pzg_A LDH, lactate dehydrogen 97.7 8.8E-05 3E-09 68.4 8.9 64 169-232 9-92 (331)
196 1id1_A Putative potassium chan 97.7 8.6E-05 3E-09 60.1 7.9 88 169-258 3-107 (153)
197 3q2i_A Dehydrogenase; rossmann 97.7 3.7E-05 1.3E-09 71.1 6.3 65 169-233 13-88 (354)
198 1hyh_A L-hicdh, L-2-hydroxyiso 97.7 1.6E-05 5.5E-10 72.4 3.6 62 170-232 2-81 (309)
199 2glx_A 1,5-anhydro-D-fructose 97.7 4.7E-05 1.6E-09 69.5 6.6 101 170-275 1-114 (332)
200 2a9f_A Putative malic enzyme ( 97.7 8E-05 2.7E-09 69.9 8.1 92 164-260 183-293 (398)
201 2dvm_A Malic enzyme, 439AA lon 97.7 0.0001 3.6E-09 70.3 9.1 106 164-274 181-312 (439)
202 2ho3_A Oxidoreductase, GFO/IDH 97.7 5.9E-05 2E-09 68.8 7.1 64 170-233 2-75 (325)
203 3tnl_A Shikimate dehydrogenase 97.7 6.9E-05 2.4E-09 68.7 7.5 105 166-273 151-279 (315)
204 3c1a_A Putative oxidoreductase 97.7 3.3E-05 1.1E-09 70.3 5.2 101 170-275 11-121 (315)
205 2nu8_A Succinyl-COA ligase [AD 97.7 0.00017 5.6E-09 65.3 9.8 104 169-276 7-117 (288)
206 3qy9_A DHPR, dihydrodipicolina 97.7 0.00015 5.1E-09 64.0 8.9 82 170-259 4-86 (243)
207 3fbt_A Chorismate mutase and s 97.6 4.5E-05 1.5E-09 68.8 5.4 103 166-275 119-231 (282)
208 3ezy_A Dehydrogenase; structur 97.6 0.0001 3.6E-09 67.8 7.7 100 170-274 3-115 (344)
209 3cea_A MYO-inositol 2-dehydrog 97.6 6.7E-05 2.3E-09 68.9 6.3 102 170-276 9-125 (346)
210 2hjr_A Malate dehydrogenase; m 97.6 0.00022 7.6E-09 65.6 9.4 60 169-229 14-91 (328)
211 3e18_A Oxidoreductase; dehydro 97.6 8.2E-05 2.8E-09 69.1 6.5 66 170-235 6-80 (359)
212 1f06_A MESO-diaminopimelate D- 97.6 0.00016 5.6E-09 66.1 8.4 100 170-274 4-110 (320)
213 1a5z_A L-lactate dehydrogenase 97.6 6.3E-05 2.2E-09 68.9 5.4 89 170-259 1-119 (319)
214 1nvt_A Shikimate 5'-dehydrogen 97.6 2.3E-05 8E-10 70.6 2.4 104 166-275 125-247 (287)
215 3l4b_C TRKA K+ channel protien 97.6 4.8E-05 1.7E-09 65.4 4.3 85 170-256 1-99 (218)
216 3rc1_A Sugar 3-ketoreductase; 97.6 9.7E-05 3.3E-09 68.4 6.5 102 169-275 27-141 (350)
217 3ff4_A Uncharacterized protein 97.5 0.00015 5.2E-09 57.2 6.5 100 170-277 5-108 (122)
218 3bio_A Oxidoreductase, GFO/IDH 97.5 0.00016 5.5E-09 65.7 7.6 100 170-275 10-118 (304)
219 1oi7_A Succinyl-COA synthetase 97.5 0.00039 1.3E-08 62.8 10.1 104 169-276 7-117 (288)
220 1xea_A Oxidoreductase, GFO/IDH 97.5 0.00012 4.1E-09 66.8 6.7 102 170-276 3-116 (323)
221 2p2s_A Putative oxidoreductase 97.5 0.00033 1.1E-08 64.1 9.5 100 170-274 5-117 (336)
222 1t2d_A LDH-P, L-lactate dehydr 97.5 0.00029 9.9E-09 64.7 9.0 59 169-228 4-80 (322)
223 2v6b_A L-LDH, L-lactate dehydr 97.5 0.00016 5.5E-09 65.7 7.0 107 170-278 1-138 (304)
224 3ego_A Probable 2-dehydropanto 97.5 6.1E-05 2.1E-09 68.5 4.2 101 170-276 3-118 (307)
225 1guz_A Malate dehydrogenase; o 97.5 0.00028 9.7E-09 64.2 8.4 60 170-230 1-79 (310)
226 3abi_A Putative uncharacterize 97.5 0.00015 5E-09 67.5 6.5 102 167-275 14-126 (365)
227 3e82_A Putative oxidoreductase 97.5 0.00018 6.3E-09 66.8 7.0 66 170-235 8-82 (364)
228 3ec7_A Putative dehydrogenase; 97.5 0.0002 7E-09 66.3 7.3 67 169-235 23-102 (357)
229 3mz0_A Inositol 2-dehydrogenas 97.4 0.00012 4.2E-09 67.3 5.4 66 170-235 3-81 (344)
230 3dfz_A SIRC, precorrin-2 dehyd 97.4 0.00035 1.2E-08 60.8 7.6 89 160-256 24-121 (223)
231 2fp4_A Succinyl-COA ligase [GD 97.4 0.00062 2.1E-08 62.0 9.5 107 166-276 10-125 (305)
232 1oju_A MDH, malate dehydrogena 97.4 0.00034 1.2E-08 63.4 7.7 109 170-281 1-147 (294)
233 1npy_A Hypothetical shikimate 97.4 0.00038 1.3E-08 62.3 7.7 101 168-275 118-230 (271)
234 1lld_A L-lactate dehydrogenase 97.4 0.0002 6.7E-09 65.1 5.7 89 169-259 7-127 (319)
235 3ohs_X Trans-1,2-dihydrobenzen 97.3 0.00027 9.3E-09 64.7 6.5 101 170-275 3-118 (334)
236 3t4e_A Quinate/shikimate dehyd 97.3 0.00041 1.4E-08 63.4 7.5 104 166-273 145-273 (312)
237 3f4l_A Putative oxidoreductase 97.3 0.00026 8.9E-09 65.2 6.2 66 170-235 3-80 (345)
238 2i6t_A Ubiquitin-conjugating e 97.3 0.00035 1.2E-08 63.6 7.0 87 169-257 14-126 (303)
239 2axq_A Saccharopine dehydrogen 97.3 0.00019 6.5E-09 69.2 5.4 105 164-274 18-136 (467)
240 3l9w_A Glutathione-regulated p 97.3 0.00013 4.5E-09 69.3 3.9 87 169-257 4-103 (413)
241 1ydw_A AX110P-like protein; st 97.3 0.00052 1.8E-08 63.5 7.7 102 170-276 7-124 (362)
242 3m2t_A Probable dehydrogenase; 97.3 0.00026 8.8E-09 65.7 5.6 65 169-233 5-81 (359)
243 3kux_A Putative oxidoreductase 97.3 0.00071 2.4E-08 62.4 8.6 66 170-235 8-82 (352)
244 3zwc_A Peroxisomal bifunctiona 97.2 0.00066 2.3E-08 69.0 8.4 115 170-287 317-457 (742)
245 3q2o_A Phosphoribosylaminoimid 97.2 0.00057 1.9E-08 63.9 7.1 62 166-227 11-82 (389)
246 1y6j_A L-lactate dehydrogenase 97.2 0.0009 3.1E-08 61.2 8.2 110 169-281 7-152 (318)
247 1ldn_A L-lactate dehydrogenase 97.2 0.00039 1.3E-08 63.5 5.5 96 169-267 6-132 (316)
248 3qvo_A NMRA family protein; st 97.2 0.00049 1.7E-08 59.4 5.9 92 167-260 21-128 (236)
249 3nep_X Malate dehydrogenase; h 97.2 0.00067 2.3E-08 62.0 7.0 96 170-267 1-127 (314)
250 3fhl_A Putative oxidoreductase 97.2 0.0011 3.9E-08 61.3 8.7 64 170-233 6-78 (362)
251 1lc0_A Biliverdin reductase A; 97.2 0.0011 3.7E-08 59.8 8.3 100 170-275 8-117 (294)
252 3r6d_A NAD-dependent epimerase 97.2 0.0017 5.9E-08 55.2 9.2 87 170-260 6-111 (221)
253 2aef_A Calcium-gated potassium 97.1 0.00026 8.9E-09 61.3 3.9 84 169-255 9-105 (234)
254 3g79_A NDP-N-acetyl-D-galactos 97.1 0.002 7E-08 62.1 10.4 98 166-266 350-458 (478)
255 2i6u_A Otcase, ornithine carba 97.1 0.011 3.8E-07 53.7 14.7 98 167-264 146-276 (307)
256 1jw9_B Molybdopterin biosynthe 97.1 0.00043 1.5E-08 61.1 5.1 79 165-244 27-144 (249)
257 2ef0_A Ornithine carbamoyltran 97.1 0.0077 2.6E-07 54.6 13.5 98 167-264 152-272 (301)
258 3tum_A Shikimate dehydrogenase 97.1 0.00083 2.8E-08 60.1 7.0 107 166-273 122-241 (269)
259 1ur5_A Malate dehydrogenase; o 97.1 0.0014 4.9E-08 59.6 8.6 92 170-265 3-126 (309)
260 3fef_A Putative glucosidase LP 97.1 0.00053 1.8E-08 65.7 5.8 101 168-269 4-159 (450)
261 2vt3_A REX, redox-sensing tran 97.1 0.00045 1.5E-08 59.8 4.7 63 170-232 86-157 (215)
262 3do5_A HOM, homoserine dehydro 97.1 0.0018 6.1E-08 59.5 8.9 106 170-276 3-136 (327)
263 1h6d_A Precursor form of gluco 97.1 0.00041 1.4E-08 66.1 4.7 102 169-275 83-202 (433)
264 3gdo_A Uncharacterized oxidore 97.0 0.00082 2.8E-08 62.2 6.5 66 170-235 6-80 (358)
265 3gvi_A Malate dehydrogenase; N 97.0 0.0026 8.9E-08 58.4 9.5 97 167-266 5-132 (324)
266 3p7m_A Malate dehydrogenase; p 97.0 0.0015 5.1E-08 59.9 7.5 97 169-267 5-131 (321)
267 3r7f_A Aspartate carbamoyltran 97.0 0.013 4.4E-07 53.2 13.5 90 167-256 145-250 (304)
268 1zud_1 Adenylyltransferase THI 97.0 0.0016 5.3E-08 57.6 7.3 79 165-244 24-141 (251)
269 1ff9_A Saccharopine reductase; 97.0 0.001 3.4E-08 63.8 6.5 64 168-231 2-79 (450)
270 3moi_A Probable dehydrogenase; 97.0 0.00052 1.8E-08 64.2 4.4 64 170-233 3-77 (387)
271 3vku_A L-LDH, L-lactate dehydr 97.0 0.001 3.5E-08 61.1 6.2 98 167-266 7-133 (326)
272 3i23_A Oxidoreductase, GFO/IDH 97.0 0.0013 4.5E-08 60.5 7.0 65 170-234 3-79 (349)
273 1hdo_A Biliverdin IX beta redu 97.0 0.0032 1.1E-07 52.3 8.8 63 169-231 3-78 (206)
274 4ew6_A D-galactose-1-dehydroge 96.9 0.0012 4E-08 60.5 6.5 63 169-232 25-93 (330)
275 4a7p_A UDP-glucose dehydrogena 96.9 0.0018 6E-08 62.1 7.8 97 165-266 318-430 (446)
276 3gpi_A NAD-dependent epimerase 96.9 0.0013 4.3E-08 58.3 6.3 62 168-229 2-72 (286)
277 2yv1_A Succinyl-COA ligase [AD 96.9 0.0018 6.3E-08 58.5 7.4 103 170-276 14-123 (294)
278 1obb_A Maltase, alpha-glucosid 96.9 0.0026 8.8E-08 61.5 8.8 110 169-279 3-174 (480)
279 3orq_A N5-carboxyaminoimidazol 96.9 0.0015 5.1E-08 60.9 6.8 61 166-226 9-79 (377)
280 3pqe_A L-LDH, L-lactate dehydr 96.9 0.0018 6.2E-08 59.5 7.2 97 169-267 5-131 (326)
281 3ldh_A Lactate dehydrogenase; 96.9 0.0004 1.4E-08 64.0 2.8 97 168-267 20-147 (330)
282 3o9z_A Lipopolysaccaride biosy 96.9 0.0027 9.1E-08 57.7 8.2 64 170-233 4-85 (312)
283 2nvw_A Galactose/lactose metab 96.8 0.0013 4.5E-08 63.5 6.1 101 169-274 39-165 (479)
284 2yv2_A Succinyl-COA synthetase 96.8 0.0029 1E-07 57.3 8.0 104 169-276 13-124 (297)
285 3d0o_A L-LDH 1, L-lactate dehy 96.8 0.0014 4.9E-08 59.8 5.9 95 169-265 6-130 (317)
286 3oa2_A WBPB; oxidoreductase, s 96.8 0.0029 1E-07 57.6 8.0 65 170-234 4-87 (318)
287 3dhn_A NAD-dependent epimerase 96.8 0.0042 1.4E-07 52.7 8.5 62 170-231 5-78 (227)
288 1dxh_A Ornithine carbamoyltran 96.8 0.0095 3.3E-07 54.8 11.3 91 166-256 152-274 (335)
289 3dty_A Oxidoreductase, GFO/IDH 96.8 0.0016 5.5E-08 61.1 6.2 66 169-234 12-99 (398)
290 3btv_A Galactose/lactose metab 96.8 0.0011 3.8E-08 63.1 5.2 65 169-233 20-102 (438)
291 2ozp_A N-acetyl-gamma-glutamyl 96.8 0.0064 2.2E-07 56.2 10.1 83 170-258 5-101 (345)
292 4f3y_A DHPR, dihydrodipicolina 96.8 0.0035 1.2E-07 56.1 8.0 85 169-258 7-106 (272)
293 1zh8_A Oxidoreductase; TM0312, 96.8 0.0017 5.9E-08 59.5 6.2 65 169-233 18-95 (340)
294 1pvv_A Otcase, ornithine carba 96.8 0.022 7.6E-07 51.9 13.4 98 167-264 153-282 (315)
295 1vlv_A Otcase, ornithine carba 96.7 0.022 7.4E-07 52.2 13.1 98 167-264 165-296 (325)
296 3dqp_A Oxidoreductase YLBE; al 96.7 0.0033 1.1E-07 53.2 7.3 63 170-232 1-75 (219)
297 1ez4_A Lactate dehydrogenase; 96.7 0.0016 5.4E-08 59.6 5.5 95 169-265 5-128 (318)
298 2bka_A CC3, TAT-interacting pr 96.7 0.0043 1.5E-07 53.2 8.0 65 167-231 16-95 (242)
299 4f2g_A Otcase 1, ornithine car 96.7 0.021 7.1E-07 51.9 12.8 98 167-264 152-275 (309)
300 2ixa_A Alpha-N-acetylgalactosa 96.7 0.0021 7.2E-08 61.2 6.4 65 169-233 20-104 (444)
301 3u3x_A Oxidoreductase; structu 96.7 0.0022 7.4E-08 59.5 6.3 65 169-233 26-101 (361)
302 4fb5_A Probable oxidoreductase 96.7 0.0024 8.2E-08 59.0 6.5 64 170-233 26-107 (393)
303 1u8x_X Maltose-6'-phosphate gl 96.7 0.0021 7.4E-08 61.9 6.3 110 169-278 28-193 (472)
304 1xyg_A Putative N-acetyl-gamma 96.7 0.008 2.7E-07 55.8 9.8 84 168-258 15-114 (359)
305 3ojo_A CAP5O; rossmann fold, c 96.7 0.0067 2.3E-07 57.8 9.5 87 167-260 313-410 (431)
306 3ijp_A DHPR, dihydrodipicolina 96.6 0.0062 2.1E-07 54.9 8.6 84 170-258 22-121 (288)
307 3v5n_A Oxidoreductase; structu 96.6 0.0046 1.6E-07 58.4 8.2 65 169-233 37-123 (417)
308 2zqz_A L-LDH, L-lactate dehydr 96.6 0.002 6.7E-08 59.2 5.4 96 169-266 9-133 (326)
309 3ew7_A LMO0794 protein; Q8Y8U8 96.6 0.0046 1.6E-07 52.0 7.4 89 170-258 1-104 (221)
310 1duv_G Octase-1, ornithine tra 96.6 0.01 3.4E-07 54.6 10.1 91 166-256 152-274 (333)
311 2nqt_A N-acetyl-gamma-glutamyl 96.6 0.0065 2.2E-07 56.3 8.7 93 169-268 9-122 (352)
312 3tl2_A Malate dehydrogenase; c 96.6 0.0048 1.6E-07 56.4 7.6 98 168-267 7-136 (315)
313 2rir_A Dipicolinate synthase, 96.6 0.0074 2.5E-07 54.3 8.8 105 167-276 5-121 (300)
314 4ina_A Saccharopine dehydrogen 96.6 0.0013 4.3E-08 62.2 3.8 83 170-257 2-108 (405)
315 1kyq_A Met8P, siroheme biosynt 96.5 0.0013 4.4E-08 59.0 3.4 41 160-202 6-46 (274)
316 2dt5_A AT-rich DNA-binding pro 96.5 0.0016 5.3E-08 56.2 3.7 64 169-233 80-153 (211)
317 1yqd_A Sinapyl alcohol dehydro 96.5 0.003 1E-07 58.4 5.9 85 168-257 187-283 (366)
318 4had_A Probable oxidoreductase 96.5 0.0023 8E-08 58.6 5.1 64 170-233 24-99 (350)
319 3fi9_A Malate dehydrogenase; s 96.5 0.0071 2.4E-07 55.9 8.3 100 167-268 6-136 (343)
320 3e8x_A Putative NAD-dependent 96.5 0.0029 9.8E-08 54.3 5.3 67 165-231 17-95 (236)
321 3h2s_A Putative NADH-flavin re 96.5 0.0047 1.6E-07 52.2 6.6 89 170-258 1-106 (224)
322 2we8_A Xanthine dehydrogenase; 96.5 0.0094 3.2E-07 55.9 9.0 96 169-279 204-302 (386)
323 1oth_A Protein (ornithine tran 96.4 0.03 1E-06 51.1 12.0 90 167-256 153-271 (321)
324 3c8m_A Homoserine dehydrogenas 96.4 0.0044 1.5E-07 56.9 6.4 105 170-275 7-141 (331)
325 2d4a_B Malate dehydrogenase; a 96.4 0.0041 1.4E-07 56.5 6.0 92 171-266 1-124 (308)
326 3i6i_A Putative leucoanthocyan 96.4 0.012 4E-07 53.5 8.9 35 168-202 9-44 (346)
327 1xgk_A Nitrogen metabolite rep 96.4 0.0032 1.1E-07 58.0 5.1 92 168-259 4-115 (352)
328 1b7g_O Protein (glyceraldehyde 96.3 0.013 4.6E-07 53.9 9.2 82 171-257 3-109 (340)
329 4amu_A Ornithine carbamoyltran 96.3 0.022 7.4E-07 53.0 10.5 90 167-256 178-300 (365)
330 1dih_A Dihydrodipicolinate red 96.3 0.0028 9.5E-08 56.7 4.3 60 169-228 5-80 (273)
331 4gqa_A NAD binding oxidoreduct 96.3 0.0024 8.1E-08 60.1 4.0 65 170-234 27-110 (412)
332 1qyc_A Phenylcoumaran benzylic 96.3 0.014 4.7E-07 51.8 8.8 62 169-230 4-87 (308)
333 2xxj_A L-LDH, L-lactate dehydr 96.3 0.0029 1E-07 57.6 4.3 96 170-267 1-125 (310)
334 2gas_A Isoflavone reductase; N 96.3 0.01 3.6E-07 52.6 8.0 34 169-202 2-36 (307)
335 2z1m_A GDP-D-mannose dehydrata 96.3 0.0085 2.9E-07 53.9 7.4 63 168-230 2-85 (345)
336 1pjq_A CYSG, siroheme synthase 96.3 0.0038 1.3E-07 59.8 5.3 71 160-233 5-84 (457)
337 1mld_A Malate dehydrogenase; o 96.3 0.016 5.4E-07 52.8 9.1 95 170-266 1-125 (314)
338 2q3e_A UDP-glucose 6-dehydroge 96.3 0.011 3.7E-07 56.7 8.5 92 167-260 327-446 (467)
339 1pg5_A Aspartate carbamoyltran 96.3 0.019 6.6E-07 51.9 9.6 90 167-256 147-260 (299)
340 4gx0_A TRKA domain protein; me 96.3 0.0096 3.3E-07 58.3 8.2 82 170-253 349-439 (565)
341 2czc_A Glyceraldehyde-3-phosph 96.3 0.005 1.7E-07 56.6 5.7 64 170-233 3-92 (334)
342 2w37_A Ornithine carbamoyltran 96.2 0.023 7.8E-07 52.7 10.1 90 167-256 174-295 (359)
343 2ejw_A HDH, homoserine dehydro 96.2 0.0061 2.1E-07 56.1 6.3 99 170-273 4-116 (332)
344 3aog_A Glutamate dehydrogenase 96.2 0.026 8.9E-07 53.7 10.7 105 164-276 230-358 (440)
345 4ep1_A Otcase, ornithine carba 96.2 0.029 1E-06 51.6 10.8 98 167-264 177-305 (340)
346 1y1p_A ARII, aldehyde reductas 96.2 0.0077 2.6E-07 54.1 6.7 65 166-230 8-93 (342)
347 4e4t_A Phosphoribosylaminoimid 96.2 0.0077 2.6E-07 57.0 7.0 61 166-226 32-102 (419)
348 3rui_A Ubiquitin-like modifier 96.2 0.015 5.3E-07 53.5 8.5 37 165-201 30-67 (340)
349 1ys4_A Aspartate-semialdehyde 96.2 0.0056 1.9E-07 56.7 5.6 83 170-257 9-115 (354)
350 3gd5_A Otcase, ornithine carba 96.2 0.033 1.1E-06 50.9 10.7 98 167-264 155-284 (323)
351 2pzm_A Putative nucleotide sug 96.1 0.0095 3.3E-07 53.7 6.9 67 164-230 15-98 (330)
352 3keo_A Redox-sensing transcrip 96.1 0.0054 1.8E-07 52.8 4.9 64 169-232 84-160 (212)
353 3tpf_A Otcase, ornithine carba 96.1 0.11 3.7E-06 47.2 13.7 98 167-264 143-273 (307)
354 1s6y_A 6-phospho-beta-glucosid 96.1 0.011 3.7E-07 56.7 7.5 110 169-278 7-174 (450)
355 4aj2_A L-lactate dehydrogenase 96.1 0.01 3.4E-07 54.6 7.0 98 166-266 16-144 (331)
356 2yfq_A Padgh, NAD-GDH, NAD-spe 96.1 0.019 6.6E-07 54.4 9.0 105 164-276 207-340 (421)
357 3lk7_A UDP-N-acetylmuramoylala 96.1 0.006 2.1E-07 58.2 5.5 110 166-275 6-139 (451)
358 4id9_A Short-chain dehydrogena 96.1 0.0081 2.8E-07 54.4 6.1 67 164-230 14-87 (347)
359 3two_A Mannitol dehydrogenase; 96.1 0.0063 2.2E-07 55.7 5.4 86 169-259 177-268 (348)
360 1lu9_A Methylene tetrahydromet 96.0 0.0031 1.1E-07 56.4 3.1 36 167-202 117-153 (287)
361 3e48_A Putative nucleoside-dip 96.0 0.012 4E-07 51.9 6.9 62 170-231 1-76 (289)
362 1smk_A Malate dehydrogenase, g 96.0 0.013 4.5E-07 53.5 7.4 94 169-264 8-131 (326)
363 3gg2_A Sugar dehydrogenase, UD 96.0 0.01 3.5E-07 56.8 6.9 93 165-260 314-422 (450)
364 3oqb_A Oxidoreductase; structu 96.0 0.013 4.5E-07 54.3 7.4 64 170-233 7-96 (383)
365 3grf_A Ornithine carbamoyltran 96.0 0.031 1.1E-06 51.2 9.6 99 166-264 158-294 (328)
366 1cf2_P Protein (glyceraldehyde 96.0 0.0056 1.9E-07 56.4 4.7 84 170-258 2-111 (337)
367 3k31_A Enoyl-(acyl-carrier-pro 96.0 0.01 3.5E-07 53.1 6.3 95 164-258 25-170 (296)
368 2tmg_A Protein (glutamate dehy 95.9 0.094 3.2E-06 49.5 12.9 105 164-276 204-333 (415)
369 3eag_A UDP-N-acetylmuramate:L- 95.9 0.012 4.1E-07 53.7 6.7 106 169-274 4-134 (326)
370 3k92_A NAD-GDH, NAD-specific g 95.9 0.023 8E-07 53.8 8.8 105 164-276 216-343 (424)
371 3oh8_A Nucleoside-diphosphate 95.9 0.017 5.7E-07 55.9 7.9 62 169-230 147-211 (516)
372 3c1o_A Eugenol synthase; pheny 95.9 0.016 5.5E-07 51.8 7.3 62 169-230 4-87 (321)
373 2cdc_A Glucose dehydrogenase g 95.9 0.0041 1.4E-07 57.4 3.4 88 166-257 178-279 (366)
374 1cdo_A Alcohol dehydrogenase; 95.9 0.023 7.8E-07 52.5 8.5 85 168-257 192-295 (374)
375 2r6j_A Eugenol synthase 1; phe 95.9 0.025 8.6E-07 50.5 8.5 61 169-229 11-88 (318)
376 2jhf_A Alcohol dehydrogenase E 95.9 0.022 7.7E-07 52.5 8.3 85 168-257 191-294 (374)
377 1nvm_B Acetaldehyde dehydrogen 95.9 0.015 5.3E-07 52.8 7.0 82 170-254 5-102 (312)
378 2csu_A 457AA long hypothetical 95.9 0.012 4E-07 56.5 6.5 106 167-276 6-123 (457)
379 4g65_A TRK system potassium up 95.9 0.0029 1E-07 60.7 2.3 62 169-230 3-78 (461)
380 3oig_A Enoyl-[acyl-carrier-pro 95.9 0.033 1.1E-06 48.5 9.0 37 166-202 4-43 (266)
381 3vh1_A Ubiquitin-like modifier 95.8 0.017 5.8E-07 57.0 7.6 36 165-200 323-359 (598)
382 4fcc_A Glutamate dehydrogenase 95.8 0.0089 3E-07 57.0 5.4 106 164-276 230-368 (450)
383 4gsl_A Ubiquitin-like modifier 95.8 0.016 5.5E-07 57.3 7.4 73 108-201 284-359 (615)
384 1vkn_A N-acetyl-gamma-glutamyl 95.8 0.051 1.8E-06 50.2 10.4 87 169-262 13-113 (351)
385 3nv9_A Malic enzyme; rossmann 95.8 0.081 2.8E-06 50.5 11.8 121 108-260 187-331 (487)
386 4a8t_A Putrescine carbamoyltra 95.8 0.12 4E-06 47.5 12.7 98 166-264 172-303 (339)
387 1ml4_A Aspartate transcarbamoy 95.8 0.016 5.4E-07 52.7 6.8 90 167-256 153-268 (308)
388 1p0f_A NADP-dependent alcohol 95.8 0.025 8.5E-07 52.2 8.2 85 168-257 191-294 (373)
389 3h8v_A Ubiquitin-like modifier 95.8 0.018 6.2E-07 51.9 7.0 38 165-202 32-70 (292)
390 2hcy_A Alcohol dehydrogenase 1 95.8 0.011 3.7E-07 54.1 5.7 84 169-257 170-270 (347)
391 2fzw_A Alcohol dehydrogenase c 95.8 0.023 8E-07 52.4 7.9 85 168-257 190-293 (373)
392 1e3i_A Alcohol dehydrogenase, 95.8 0.028 9.5E-07 51.9 8.4 85 168-257 195-298 (376)
393 3sds_A Ornithine carbamoyltran 95.7 0.065 2.2E-06 49.6 10.7 93 164-256 183-308 (353)
394 2d8a_A PH0655, probable L-thre 95.7 0.0078 2.7E-07 55.1 4.5 85 168-257 167-268 (348)
395 1b8p_A Protein (malate dehydro 95.7 0.034 1.2E-06 50.8 8.7 97 169-267 5-142 (329)
396 1uuf_A YAHK, zinc-type alcohol 95.7 0.0075 2.5E-07 55.9 4.3 84 169-257 195-289 (369)
397 1n2s_A DTDP-4-, DTDP-glucose o 95.7 0.026 9.1E-07 49.7 7.8 60 170-230 1-64 (299)
398 4h3v_A Oxidoreductase domain p 95.7 0.0046 1.6E-07 57.0 2.8 64 170-233 7-88 (390)
399 3upl_A Oxidoreductase; rossman 95.7 0.0095 3.3E-07 56.9 5.0 103 170-276 24-160 (446)
400 1rjw_A ADH-HT, alcohol dehydro 95.7 0.0063 2.1E-07 55.6 3.7 85 169-258 165-263 (339)
401 3on5_A BH1974 protein; structu 95.7 0.017 5.9E-07 53.6 6.6 86 169-272 199-286 (362)
402 3d6n_B Aspartate carbamoyltran 95.7 0.11 3.6E-06 46.8 11.5 64 167-231 144-215 (291)
403 1p9l_A Dihydrodipicolinate red 95.6 0.06 2.1E-06 47.2 9.7 74 170-258 1-78 (245)
404 3orf_A Dihydropteridine reduct 95.6 0.017 5.7E-07 50.3 6.1 92 168-259 21-147 (251)
405 3csu_A Protein (aspartate carb 95.6 0.034 1.2E-06 50.5 8.3 96 167-262 152-274 (310)
406 3m2p_A UDP-N-acetylglucosamine 95.6 0.02 6.8E-07 51.0 6.7 61 169-230 2-72 (311)
407 1qyd_A Pinoresinol-lariciresin 95.6 0.054 1.8E-06 48.0 9.5 62 169-230 4-86 (313)
408 1ooe_A Dihydropteridine reduct 95.6 0.016 5.3E-07 49.8 5.7 92 168-259 2-132 (236)
409 3h5n_A MCCB protein; ubiquitin 95.6 0.016 5.5E-07 53.7 6.1 36 166-201 115-151 (353)
410 1piw_A Hypothetical zinc-type 95.6 0.0096 3.3E-07 54.8 4.6 84 169-257 180-277 (360)
411 4gmf_A Yersiniabactin biosynth 95.6 0.0037 1.3E-07 58.4 1.8 103 169-276 7-121 (372)
412 3uko_A Alcohol dehydrogenase c 95.6 0.039 1.3E-06 51.0 8.7 85 168-257 193-296 (378)
413 3ijr_A Oxidoreductase, short c 95.6 0.03 1E-06 49.9 7.7 95 165-259 43-185 (291)
414 1lnq_A MTHK channels, potassiu 95.6 0.006 2.1E-07 55.6 3.1 82 169-253 115-208 (336)
415 3aoe_E Glutamate dehydrogenase 95.6 0.075 2.6E-06 50.3 10.6 105 164-276 213-337 (419)
416 3dr3_A N-acetyl-gamma-glutamyl 95.6 0.018 6.2E-07 53.0 6.3 85 170-259 5-109 (337)
417 4a8p_A Putrescine carbamoyltra 95.6 0.14 4.8E-06 47.3 12.2 98 166-264 150-281 (355)
418 2dtx_A Glucose 1-dehydrogenase 95.5 0.054 1.8E-06 47.4 9.1 64 166-229 5-83 (264)
419 3mtj_A Homoserine dehydrogenas 95.5 0.0091 3.1E-07 57.0 4.3 103 169-276 10-131 (444)
420 1e3j_A NADP(H)-dependent ketos 95.5 0.035 1.2E-06 50.7 8.1 85 169-258 169-273 (352)
421 1ebf_A Homoserine dehydrogenas 95.5 0.023 7.9E-07 52.7 6.8 84 170-258 5-117 (358)
422 3uce_A Dehydrogenase; rossmann 95.5 0.012 4E-07 50.2 4.5 91 166-258 3-118 (223)
423 1dhr_A Dihydropteridine reduct 95.5 0.025 8.5E-07 48.7 6.6 93 167-259 5-136 (241)
424 1e6u_A GDP-fucose synthetase; 95.5 0.051 1.7E-06 48.3 8.9 61 169-231 3-66 (321)
425 3ip1_A Alcohol dehydrogenase, 95.4 0.032 1.1E-06 52.2 7.7 90 168-257 213-319 (404)
426 3cps_A Glyceraldehyde 3-phosph 95.4 0.018 6E-07 53.4 5.7 83 170-257 18-139 (354)
427 3rft_A Uronate dehydrogenase; 95.4 0.013 4.5E-07 51.3 4.7 62 168-229 2-73 (267)
428 2wm3_A NMRA-like family domain 95.4 0.019 6.6E-07 50.8 5.9 61 169-229 5-81 (299)
429 2pk3_A GDP-6-deoxy-D-LYXO-4-he 95.4 0.029 9.9E-07 50.0 7.0 63 169-231 12-85 (321)
430 2zcu_A Uncharacterized oxidore 95.4 0.007 2.4E-07 53.0 2.9 60 171-230 1-75 (286)
431 2q1s_A Putative nucleotide sug 95.4 0.029 9.8E-07 51.6 7.1 66 166-231 29-110 (377)
432 2r00_A Aspartate-semialdehyde 95.4 0.014 4.8E-07 53.7 4.9 84 170-258 4-98 (336)
433 2x0j_A Malate dehydrogenase; o 95.4 0.016 5.4E-07 52.4 5.1 96 170-267 1-127 (294)
434 2o3j_A UDP-glucose 6-dehydroge 95.4 0.039 1.3E-06 53.1 8.2 97 167-266 333-455 (481)
435 2h7i_A Enoyl-[acyl-carrier-pro 95.4 0.014 4.8E-07 51.2 4.7 37 166-202 4-43 (269)
436 1iz0_A Quinone oxidoreductase; 95.3 0.012 4.1E-07 52.7 4.2 82 169-257 126-219 (302)
437 3e5r_O PP38, glyceraldehyde-3- 95.3 0.023 7.8E-07 52.3 6.1 29 170-198 4-33 (337)
438 1o6z_A MDH, malate dehydrogena 95.3 0.035 1.2E-06 50.1 7.3 94 170-265 1-126 (303)
439 2cf5_A Atccad5, CAD, cinnamyl 95.3 0.017 5.9E-07 53.1 5.3 85 168-257 180-276 (357)
440 2jl1_A Triphenylmethane reduct 95.3 0.0076 2.6E-07 52.9 2.8 61 170-230 1-76 (287)
441 2dkn_A 3-alpha-hydroxysteroid 95.3 0.029 9.8E-07 48.1 6.4 61 170-230 2-72 (255)
442 1js1_X Transcarbamylase; alpha 95.3 0.21 7.1E-06 45.6 12.4 96 167-264 167-286 (324)
443 2yyy_A Glyceraldehyde-3-phosph 95.3 0.04 1.4E-06 50.8 7.7 82 170-256 3-113 (343)
444 3grk_A Enoyl-(acyl-carrier-pro 95.3 0.024 8.2E-07 50.6 6.0 94 166-259 28-172 (293)
445 2y0c_A BCEC, UDP-glucose dehyd 95.3 0.056 1.9E-06 52.0 9.0 95 166-264 325-445 (478)
446 1hdg_O Holo-D-glyceraldehyde-3 95.3 0.014 4.8E-07 53.7 4.4 84 170-258 1-124 (332)
447 3r3s_A Oxidoreductase; structu 95.3 0.062 2.1E-06 47.9 8.6 37 165-201 45-82 (294)
448 3nrc_A Enoyl-[acyl-carrier-pro 95.2 0.046 1.6E-06 48.2 7.7 38 165-202 22-62 (280)
449 3ip3_A Oxidoreductase, putativ 95.2 0.014 5E-07 53.1 4.5 63 170-233 3-80 (337)
450 2a35_A Hypothetical protein PA 95.2 0.016 5.4E-07 48.5 4.3 63 168-232 4-77 (215)
451 1mv8_A GMD, GDP-mannose 6-dehy 95.2 0.028 9.4E-07 53.4 6.5 85 168-259 312-422 (436)
452 3ruf_A WBGU; rossmann fold, UD 95.2 0.032 1.1E-06 50.4 6.7 65 166-230 22-110 (351)
453 3uxy_A Short-chain dehydrogena 95.2 0.044 1.5E-06 48.2 7.3 66 165-230 24-104 (266)
454 2q1w_A Putative nucleotide sug 95.2 0.037 1.3E-06 49.8 7.0 66 165-230 17-99 (333)
455 1pl8_A Human sorbitol dehydrog 95.2 0.027 9.2E-07 51.7 6.0 85 169-258 172-275 (356)
456 1xq6_A Unknown protein; struct 95.2 0.022 7.5E-07 48.6 5.1 63 168-230 3-79 (253)
457 3slg_A PBGP3 protein; structur 95.1 0.03 1E-06 51.1 6.3 65 166-230 21-101 (372)
458 2dq4_A L-threonine 3-dehydroge 95.1 0.015 5.2E-07 53.0 4.3 85 168-257 164-263 (343)
459 3hhp_A Malate dehydrogenase; M 95.1 0.074 2.5E-06 48.3 8.8 96 170-267 1-127 (312)
460 1pqw_A Polyketide synthase; ro 95.1 0.0074 2.5E-07 50.4 2.0 85 168-258 38-139 (198)
461 1u8f_O GAPDH, glyceraldehyde-3 95.1 0.023 7.8E-07 52.3 5.3 84 170-258 4-124 (335)
462 2ydy_A Methionine adenosyltran 95.1 0.03 1E-06 49.8 6.0 62 169-230 2-70 (315)
463 3s2e_A Zinc-containing alcohol 95.0 0.013 4.5E-07 53.3 3.6 85 168-257 166-264 (340)
464 2c5a_A GDP-mannose-3', 5'-epim 95.0 0.04 1.4E-06 50.7 6.8 64 167-230 27-103 (379)
465 2x5o_A UDP-N-acetylmuramoylala 95.0 0.027 9.1E-07 53.5 5.7 108 167-274 3-130 (439)
466 2h6e_A ADH-4, D-arabinose 1-de 95.0 0.017 5.7E-07 52.8 4.0 84 168-256 170-269 (344)
467 1sb8_A WBPP; epimerase, 4-epim 95.0 0.041 1.4E-06 49.9 6.6 65 166-230 24-112 (352)
468 4fs3_A Enoyl-[acyl-carrier-pro 94.9 0.043 1.5E-06 48.0 6.5 38 166-203 3-43 (256)
469 2ph5_A Homospermidine synthase 94.9 0.13 4.3E-06 49.5 10.1 102 169-288 13-118 (480)
470 1db3_A GDP-mannose 4,6-dehydra 94.9 0.084 2.9E-06 48.0 8.7 35 169-203 1-36 (372)
471 3k5i_A Phosphoribosyl-aminoimi 94.9 0.038 1.3E-06 51.8 6.5 62 164-226 19-92 (403)
472 4ej6_A Putative zinc-binding d 94.9 0.027 9.1E-07 52.1 5.3 84 169-257 183-285 (370)
473 3ay3_A NAD-dependent epimerase 94.9 0.021 7.3E-07 49.7 4.4 61 170-230 3-73 (267)
474 3uog_A Alcohol dehydrogenase; 94.9 0.019 6.4E-07 52.9 4.2 84 168-257 189-288 (363)
475 2p4h_X Vestitone reductase; NA 94.8 0.075 2.6E-06 47.2 8.0 60 169-228 1-82 (322)
476 2x4g_A Nucleoside-diphosphate- 94.8 0.043 1.5E-06 49.2 6.4 62 169-230 13-87 (342)
477 1uzm_A 3-oxoacyl-[acyl-carrier 94.8 0.062 2.1E-06 46.4 7.1 64 166-229 12-90 (247)
478 2a4k_A 3-oxoacyl-[acyl carrier 94.8 0.039 1.3E-06 48.4 5.8 36 167-202 4-40 (263)
479 2ep5_A 350AA long hypothetical 94.8 0.053 1.8E-06 50.0 6.9 82 170-257 5-109 (350)
480 3r3j_A Glutamate dehydrogenase 94.7 0.054 1.8E-06 51.6 6.9 105 164-276 234-373 (456)
481 3cmc_O GAPDH, glyceraldehyde-3 94.7 0.026 8.9E-07 51.9 4.6 28 171-198 3-31 (334)
482 2rh8_A Anthocyanidin reductase 94.7 0.093 3.2E-06 47.0 8.2 60 169-228 9-88 (338)
483 3m6i_A L-arabinitol 4-dehydrog 94.7 0.063 2.2E-06 49.2 7.1 84 169-257 180-284 (363)
484 4eye_A Probable oxidoreductase 94.6 0.028 9.5E-07 51.3 4.6 83 168-256 159-257 (342)
485 1fjh_A 3alpha-hydroxysteroid d 94.6 0.045 1.6E-06 47.2 5.8 92 170-261 2-118 (257)
486 1y8q_A Ubiquitin-like 1 activa 94.6 0.085 2.9E-06 48.6 7.9 79 165-244 32-148 (346)
487 3vtf_A UDP-glucose 6-dehydroge 94.6 0.072 2.4E-06 50.8 7.5 83 166-258 330-428 (444)
488 3d7l_A LIN1944 protein; APC893 94.6 0.022 7.4E-07 47.4 3.5 58 171-229 5-67 (202)
489 3ing_A Homoserine dehydrogenas 94.6 0.058 2E-06 49.3 6.6 105 170-275 5-137 (325)
490 3mw9_A GDH 1, glutamate dehydr 94.5 0.13 4.6E-06 49.4 9.2 101 166-276 241-366 (501)
491 1t4b_A Aspartate-semialdehyde 94.5 0.12 4E-06 48.1 8.6 83 170-258 2-100 (367)
492 3d4o_A Dipicolinate synthase s 94.5 0.15 5E-06 45.6 9.0 105 167-276 3-119 (293)
493 2bma_A Glutamate dehydrogenase 94.5 0.063 2.2E-06 51.4 6.8 105 164-276 247-386 (470)
494 2hjs_A USG-1 protein homolog; 94.5 0.046 1.6E-06 50.3 5.7 82 170-256 7-99 (340)
495 1rkx_A CDP-glucose-4,6-dehydra 94.5 0.058 2E-06 48.9 6.3 63 167-229 7-89 (357)
496 1n7h_A GDP-D-mannose-4,6-dehyd 94.4 0.056 1.9E-06 49.5 6.2 34 170-203 29-63 (381)
497 3v2g_A 3-oxoacyl-[acyl-carrier 94.4 0.1 3.4E-06 46.0 7.6 92 166-257 28-166 (271)
498 1uay_A Type II 3-hydroxyacyl-C 94.4 0.11 3.9E-06 44.0 7.6 61 169-229 2-75 (242)
499 3fpc_A NADP-dependent alcohol 94.4 0.026 9E-07 51.6 3.8 83 169-256 167-266 (352)
500 1spx_A Short-chain reductase f 94.3 0.052 1.8E-06 47.6 5.5 36 167-202 4-40 (278)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=4.8e-64 Score=469.79 Aligned_cols=278 Identities=27% Similarity=0.464 Sum_probs=243.2
Q ss_pred CCCCCeEEEECCCCCCccccchhhhcccCeEEEecCC-CCChHHHHHhccCCcEEEEEeCCCCCCHHHHccC-CCcceEE
Q 022233 13 SQDLPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWES-PLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLM-PAVRLVM 90 (300)
Q Consensus 13 ~~~kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~-p~Lk~I~ 90 (300)
.++|||||++.++ .++..+. |++.|++...... ..+.++ +.+.++++|++++++..++++++++++ |+||+|+
T Consensus 25 ~~~~~kvlv~~~~--~~~~~~~--l~~~~~v~~~~~~~~~~~~~-l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~ 99 (345)
T 4g2n_A 25 THPIQKAFLCRRF--TPAIEAE--LRQRFDLEVNLEDTVLTPSG-IASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIA 99 (345)
T ss_dssp --CCCEEEESSCC--CHHHHHH--HHHHSEEEECTTCCCCCHHH-HHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEE
T ss_pred cCCCCEEEEeCCC--CHHHHHH--HHccCCEEEecCCCCCCHHH-HHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEE
Confidence 4679999999987 5666666 8888987653322 233444 445568999999987789999999997 7999999
Q ss_pred EcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCC
Q 022233 91 TTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGK 170 (300)
Q Consensus 91 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~ 170 (300)
+.|+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|...... . .. |.+|+|+
T Consensus 100 ~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~-~--~~--g~~l~gk 174 (345)
T 4g2n_A 100 TLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPT-Q--LL--GMGLTGR 174 (345)
T ss_dssp ESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTT-T--TC--BCCCTTC
T ss_pred EcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcc-c--cc--ccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999732111 1 23 7899999
Q ss_pred EEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC---CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCC
Q 022233 171 RVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS---VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALG 247 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~---~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk 247 (300)
||||||+|+||+.+|+++++|||+|++||+++... .+.....++++++++||+|++|+|++++|+++|+++.|+.||
T Consensus 175 tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk 254 (345)
T 4g2n_A 175 RLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIP 254 (345)
T ss_dssp EEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSC
T ss_pred EEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCC
Confidence 99999999999999999999999999999986431 244445699999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCC
Q 022233 248 KEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXXX 300 (300)
Q Consensus 248 ~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv~ 300 (300)
+|++|||+|||++||++||+++|++|+|+||+||||++||.+++|||++|||+
T Consensus 255 ~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvi 307 (345)
T 4g2n_A 255 EGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIF 307 (345)
T ss_dssp TTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEE
T ss_pred CCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEE
Confidence 99999999999999999999999999999999999999995567999999985
No 2
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-64 Score=472.84 Aligned_cols=275 Identities=32% Similarity=0.595 Sum_probs=218.3
Q ss_pred CCCCeEEEECCCCCCccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcC
Q 022233 14 QDLPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTS 93 (300)
Q Consensus 14 ~~kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~ 93 (300)
+|||+||++.++ .++..+. |++.|++..+. ...+.++++.+. +++|++++++..++++++++++|+||+|++.|
T Consensus 28 ~~~~~vl~~~~~--~~~~~~~--L~~~~~v~~~~-~~~~~~~~~~~~-~~~d~li~~~~~~i~~~~l~~~p~Lk~I~~~g 101 (340)
T 4dgs_A 28 NVKPDLLLVEPM--MPFVMDE--LQRNYSVHRLY-QAADRPALEAAL-PSIRAVATGGGAGLSNEWMEKLPSLGIIAING 101 (340)
T ss_dssp -----CEECSCC--CHHHHHT--HHHHSCCEETT-CGGGHHHHHHHG-GGCCEEEEETTTCBCHHHHHHCSSCCEEEEES
T ss_pred CCCCEEEEECCC--CHHHHHH--HhcCCcEEEeC-CCCCHHHHHHHh-CCcEEEEEcCCCCCCHHHHhhCCCCEEEEECC
Confidence 579999999997 5777766 88889876532 222345566655 79999999888899999999999999999999
Q ss_pred CCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEE
Q 022233 94 AGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVG 173 (300)
Q Consensus 94 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vg 173 (300)
+|+|+||+++|+++||.|+|+|++++.+|||+++++||++.|+++.+++.+++|.|.. ...+ +. |.+|+|+|||
T Consensus 102 ~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~---~~~~-~~--~~~l~gktiG 175 (340)
T 4dgs_A 102 VGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAA---GEQL-PL--GHSPKGKRIG 175 (340)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC----------CC--CCCCTTCEEE
T ss_pred CCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCccc---ccCc-Cc--cccccCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999972 1123 34 7899999999
Q ss_pred EEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEE
Q 022233 174 IVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVI 253 (300)
Q Consensus 174 IiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lI 253 (300)
|||+|+||+.+|+++++|||+|++|++++....+.....+++|++++||+|++|+|++++|+++++++.++.||+|++||
T Consensus 176 IIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailI 255 (340)
T 4dgs_A 176 VLGLGQIGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVV 255 (340)
T ss_dssp EECCSHHHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEE
T ss_pred EECCCHHHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEE
Confidence 99999999999999999999999999987765555556799999999999999999999999999999999999999999
Q ss_pred EcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCC
Q 022233 254 NIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXXX 300 (300)
Q Consensus 254 n~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv~ 300 (300)
|+|||+++|+++|+++|++|+|+||+||||++||++++|||++|||+
T Consensus 256 N~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvi 302 (340)
T 4dgs_A 256 NVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTV 302 (340)
T ss_dssp ECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEE
T ss_pred ECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEE
Confidence 99999999999999999999999999999999999888999999984
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=3e-61 Score=449.23 Aligned_cols=274 Identities=23% Similarity=0.412 Sum_probs=240.9
Q ss_pred CCCeEEEECCCCCCccccchhhhcccCeEEEecCC-CCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcC
Q 022233 15 DLPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWES-PLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTS 93 (300)
Q Consensus 15 ~kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~ 93 (300)
||||||++.+. .++..+. |++.++++..... ..+.+++ .+.++++|++++++..++++++++++|+||+|++.|
T Consensus 1 m~~kvlv~~~~--~~~~~~~--l~~~~~v~~~~~~~~~~~~~~-~~~~~~~d~~i~~~~~~i~~~~l~~~~~Lk~I~~~~ 75 (330)
T 4e5n_A 1 MLPKLVITHRV--HEEILQL--LAPHCELITNQTDSTLTREEI-LRRCRDAQAMMAFMPDRVDADFLQACPELRVIGCAL 75 (330)
T ss_dssp CCCEEEECSCC--CHHHHHH--HTTTCEEECCCSSSCCCHHHH-HHHHTTCSEEEECTTCCBCHHHHHHCTTCCEEEESS
T ss_pred CCCEEEEecCC--CHHHHHH--HHhCCeEEEecCCCCCCHHHH-HHHhCCCeEEEEeCCCCCCHHHHhhCCCCcEEEECC
Confidence 58999999987 5777777 8888986542222 2234444 455689999999777899999999999999999999
Q ss_pred CCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEE
Q 022233 94 AGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVG 173 (300)
Q Consensus 94 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vg 173 (300)
+|+||||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|..+. . . .. |.+|+|+|||
T Consensus 76 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~-~--~~--~~~l~g~tvG 149 (330)
T 4e5n_A 76 KGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQ-P-R--FY--GTGLDNATVG 149 (330)
T ss_dssp SCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCC-S-C--CC--CCCSTTCEEE
T ss_pred CcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccC-c-c--cc--CCccCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999997321 1 1 22 7899999999
Q ss_pred EEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCC
Q 022233 174 IVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGK 248 (300)
Q Consensus 174 IiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ 248 (300)
|||+|+||+.+|+++++|||+|++|++++... .+. ...++++++++||+|++|+|++++|+++|+++.|+.||+
T Consensus 150 IIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ 228 (330)
T 4e5n_A 150 FLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGL-RQVACSELFASSDFILLALPLNADTLHLVNAELLALVRP 228 (330)
T ss_dssp EECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTE-EECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT
T ss_pred EEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCc-eeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCC
Confidence 99999999999999999999999999986321 122 245899999999999999999999999999999999999
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCC-------CCCC-CCCCCCCCCC
Q 022233 249 EGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENE-------PDVP-KELXXXXXXX 300 (300)
Q Consensus 249 ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~E-------P~~~-~~L~~~~nv~ 300 (300)
|++|||+|||+++|+++|+++|++|+|+||+||||++| |++. +|||++|||+
T Consensus 229 gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvi 288 (330)
T 4e5n_A 229 GALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTL 288 (330)
T ss_dssp TEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEE
T ss_pred CcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEE
Confidence 99999999999999999999999999999999999999 9764 4899999985
No 4
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=3.6e-60 Score=451.73 Aligned_cols=272 Identities=25% Similarity=0.314 Sum_probs=233.7
Q ss_pred CCCeEEEECCCCCCccccchhhhccc-C-eEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEc
Q 022233 15 DLPRVLLFKPPPDFHLFGDECFSSNK-F-KFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTT 92 (300)
Q Consensus 15 ~kp~vl~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~ 92 (300)
+|+|||++++. .+...+. |++. | ++. +.....+.++ +.+.++++|++++++.+++++++++++|+||+|+++
T Consensus 14 ~~~kIl~~~~i--~~~~~~~--l~~~g~~~v~-~~~~~~~~~~-l~~~~~~~d~l~v~~~~~i~~~~l~~~p~Lk~I~~~ 87 (416)
T 3k5p_A 14 DRINVLLLEGI--SQTAVEY--FKSSGYTNVT-HLPKALDKAD-LIKAISSAHIIGIRSRTQLTEEIFAAANRLIAVGCF 87 (416)
T ss_dssp GGSCEEECSCC--CHHHHHH--HHHTTCCCEE-ECSSCCCHHH-HHHHHTTCSEEEECSSCCBCHHHHHHCTTCCEEEEC
T ss_pred CCcEEEEECCC--CHHHHHH--HHHCCCcEEE-ECCCCCCHHH-HHHHccCCEEEEEcCCCCCCHHHHHhCCCcEEEEEC
Confidence 35789999887 5655555 6654 5 443 3333334444 445568999998888889999999999999999999
Q ss_pred CCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEE
Q 022233 93 SAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRV 172 (300)
Q Consensus 93 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~v 172 (300)
|+|+||||+++|+++||.|+|+|++++++|||++++++|++.|+++.+++.+++|.|.. . .+ . +.+++||||
T Consensus 88 ~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~---~-~~--~--~~el~gktv 159 (416)
T 3k5p_A 88 SVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEK---T-AI--G--SREVRGKTL 159 (416)
T ss_dssp SSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC---C-CT--T--CCCSTTCEE
T ss_pred ccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccc---c-CC--C--CccCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999982 2 11 2 678999999
Q ss_pred EEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcE
Q 022233 173 GIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGV 251 (300)
Q Consensus 173 gIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~ 251 (300)
||||+|+||+.+|+++++|||+|++||+++.... ......+++|++++||+|++|+|++++|+++|+++.|+.||+|++
T Consensus 160 GIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gai 239 (416)
T 3k5p_A 160 GIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAF 239 (416)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEE
T ss_pred EEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcE
Confidence 9999999999999999999999999999765432 234457999999999999999999999999999999999999999
Q ss_pred EEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-----CCCCCCCCCC
Q 022233 252 VINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-----KELXXXXXXX 300 (300)
Q Consensus 252 lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-----~~L~~~~nv~ 300 (300)
|||+|||++||++||+++|++|+|+||+||||++||+++ +|||++|||+
T Consensus 240 lIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvi 293 (416)
T 3k5p_A 240 LINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVI 293 (416)
T ss_dssp EEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEE
T ss_pred EEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEE
Confidence 999999999999999999999999999999999999875 4899999985
No 5
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=2.1e-61 Score=450.88 Aligned_cols=232 Identities=30% Similarity=0.463 Sum_probs=212.5
Q ss_pred CCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHH
Q 022233 62 QSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASD 141 (300)
Q Consensus 62 ~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~ 141 (300)
+++|+++++...++++++|+++|+||+|++.|+|+||||+++|+++||.|+|+|++++.+||||+++++|++.|++..++
T Consensus 41 ~~ad~i~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~ 120 (334)
T 3kb6_A 41 KKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIE 120 (334)
T ss_dssp HHCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred cCCCEEEEeCCCCCCHHHHhcCCCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhcccccc
Confidence 57899999888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC--CCcccCCHHHHhh
Q 022233 142 RFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV--SYPFYSNVCELAA 219 (300)
Q Consensus 142 ~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--~~~~~~~l~e~l~ 219 (300)
+.+++|.|.... . .. +.+|+|+||||||+|+||+.+|+++++|||+|++||+...+.. ....+.+++|+++
T Consensus 121 ~~~~~~~~~~~~---~--~~--~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~ 193 (334)
T 3kb6_A 121 DRVKKLNFSQDS---E--IL--ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLK 193 (334)
T ss_dssp HHHHTTCCCCCG---G--GC--BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHH
T ss_pred cccccccccccc---c--cc--cceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHh
Confidence 999999987321 1 22 7899999999999999999999999999999999998764321 2234579999999
Q ss_pred cCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-C-------
Q 022233 220 NCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-K------- 291 (300)
Q Consensus 220 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~------- 291 (300)
+||+|++|||+|++|+++|+++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++||++. +
T Consensus 194 ~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~ 273 (334)
T 3kb6_A 194 ESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKA 273 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCC
T ss_pred hCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999742 1
Q ss_pred --------CCCCCCCCC
Q 022233 292 --------ELXXXXXXX 300 (300)
Q Consensus 292 --------~L~~~~nv~ 300 (300)
|||++|||+
T Consensus 274 ~~~~~~~~~L~~~~nvi 290 (334)
T 3kb6_A 274 TDKNLKILELACKDNVI 290 (334)
T ss_dssp CHHHHHHHHHHTSTTEE
T ss_pred ccccccchhhccCCCEE
Confidence 588999984
No 6
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=2e-59 Score=447.35 Aligned_cols=271 Identities=20% Similarity=0.304 Sum_probs=228.8
Q ss_pred CCeEEEECCCCCCccccchhhhccc-C-eEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcC
Q 022233 16 LPRVLLFKPPPDFHLFGDECFSSNK-F-KFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTS 93 (300)
Q Consensus 16 kp~vl~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~ 93 (300)
++|||++.++ .+...+. |++. + ++.. .....+.+++ .+.++++|++++++.+++++++++++|+||+|+++|
T Consensus 4 ~~kil~~~~~--~~~~~~~--l~~~~~~~v~~-~~~~~~~~~l-~~~~~~~d~l~~~~~~~~~~~~l~~~~~Lk~I~~~~ 77 (404)
T 1sc6_A 4 KIKFLLVEGV--HQKALES--LRAAGYTNIEF-HKGALDDEQL-KESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGAFA 77 (404)
T ss_dssp SCCEEECSCC--CHHHHHH--HHHTTCCCEEE-CSSCCCHHHH-HHHTTSCSEEEECSSCCBCHHHHHHCSSCCEEEECS
T ss_pred ceEEEEeCCC--CHHHHHH--HHhCCCcEEEE-cCCCCCHHHH-HHHhcCCeEEEEcCCCCCCHHHHhhCCCCcEEEECC
Confidence 4589998876 4554545 6554 5 5543 3323344444 445689999988877899999999999999999999
Q ss_pred CCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEE
Q 022233 94 AGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVG 173 (300)
Q Consensus 94 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vg 173 (300)
+|+||||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.. . .+ . +.+|+|||||
T Consensus 78 ~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~---~-~~--~--~~el~gktlG 149 (404)
T 1sc6_A 78 IGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNK---L-AA--G--SFEARGKKLG 149 (404)
T ss_dssp SCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-------------CCCSTTCEEE
T ss_pred cccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccc---c-CC--C--ccccCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999972 1 12 2 6789999999
Q ss_pred EEecChhHHHHHHHHHhCCCEEEEECCCCCCCCC-CcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEE
Q 022233 174 IVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVS-YPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVV 252 (300)
Q Consensus 174 IiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~-~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~l 252 (300)
|||+|+||+.+|+++++|||+|++||++.....+ .....+++|++++||+|++|+|++++|+++|+++.|+.||+|++|
T Consensus 150 iIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~l 229 (404)
T 1sc6_A 150 IIGYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLL 229 (404)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEE
T ss_pred EEeECHHHHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEE
Confidence 9999999999999999999999999997654433 344568999999999999999999999999999999999999999
Q ss_pred EEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-----CCCCCCCCCC
Q 022233 253 INIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-----KELXXXXXXX 300 (300)
Q Consensus 253 In~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-----~~L~~~~nv~ 300 (300)
||+|||+++|+++|+++|++|+++||+||||++||+++ +|||++|||+
T Consensus 230 IN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvi 282 (404)
T 1sc6_A 230 INASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVL 282 (404)
T ss_dssp EECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEE
T ss_pred EECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEE
Confidence 99999999999999999999999999999999999863 4899999985
No 7
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.5e-59 Score=440.58 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=225.0
Q ss_pred hccc-CeEEEecCCCCChHHHHHhccCCcEEEEEeCC--CCCCHHHHccCCCcceEEEcCCCCCCCChhHHhhCCeEEEe
Q 022233 37 SSNK-FKFLKAWESPLPLDQFLKTHAQSVEAILSSGG--APVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVAN 113 (300)
Q Consensus 37 l~~~-~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~--~~~~~e~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n 113 (300)
|++. ++++.......+ ++.+.+.++++|+++++.. .++++++++++|+||+|++.|+|+||||+++|+++||.|+|
T Consensus 36 L~~~g~ev~~~~~~~~~-~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~id~~~a~~~gI~V~n 114 (351)
T 3jtm_A 36 LESQGHQYIVTDDKEGP-DCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAE 114 (351)
T ss_dssp HHHTTCEEEEESCCSST-TSHHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTTBCHHHHHHTTCEEEE
T ss_pred HHHCCCEEEEeCCCCCC-HHHHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeecccCHHHHHhcCeeEEE
Confidence 6554 676653333222 2334556689999998643 46999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCC
Q 022233 114 AGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGC 193 (300)
Q Consensus 114 ~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~ 193 (300)
+|++++.+||||++++||++.|++..+++.+++|.|.... +... +.+|+|++|||||+|+||+.+|++|++|||
T Consensus 115 ~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~----~~~~--~~~l~gktvGIIG~G~IG~~vA~~l~~~G~ 188 (351)
T 3jtm_A 115 VTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAG----IAYR--AYDLEGKTIGTVGAGRIGKLLLQRLKPFGC 188 (351)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHH----HHTT--CCCSTTCEEEEECCSHHHHHHHHHHGGGCC
T ss_pred CCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCcccc----ccCC--cccccCCEEeEEEeCHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999997211 1012 678999999999999999999999999999
Q ss_pred EEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 022233 194 SISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVR 268 (300)
Q Consensus 194 ~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~ 268 (300)
+|++|++++.+. .+.....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|++
T Consensus 189 ~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~ 268 (351)
T 3jtm_A 189 NLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVD 268 (351)
T ss_dssp EEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHH
T ss_pred EEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHH
Confidence 999999876432 144445689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCceEEEeeCCCCCCCCC-CCCCCCCCCC
Q 022233 269 CLVQGEIKGAGLDVFENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 269 aL~~~~i~~a~LDV~~~EP~~~-~~L~~~~nv~ 300 (300)
+|++|+|+||+||||++||+++ +|||++|||+
T Consensus 269 aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvi 301 (351)
T 3jtm_A 269 AVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQA 301 (351)
T ss_dssp HHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBC
T ss_pred HHHhCCccEEEeCCCCCCCCCCCChhhcCCCEE
Confidence 9999999999999999999875 5899999985
No 8
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=7.4e-60 Score=438.00 Aligned_cols=268 Identities=22% Similarity=0.307 Sum_probs=228.9
Q ss_pred CCCCCeEEEECCCCCCccccchhhh-cccC-eEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEE
Q 022233 13 SQDLPRVLLFKPPPDFHLFGDECFS-SNKF-KFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVM 90 (300)
Q Consensus 13 ~~~kp~vl~~~~~~~~~~~~~~~~l-~~~~-~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~ 90 (300)
|..|.|||++.+. .+...+. | ++.+ ++...... +.++ +.+.++++|+++++ .++++++++++|+||||+
T Consensus 2 ~~~~mkili~~~~--~~~~~~~--L~~~~~p~~~~~~~~--~~~~-~~~~~~~ad~li~~--~~~~~~~l~~~~~Lk~I~ 72 (324)
T 3hg7_A 2 SLSQRTLLLLSQD--NAHYERL--LKAAHLPHLRILRAD--NQSD-AEKLIGEAHILMAE--PARAKPLLAKANKLSWFQ 72 (324)
T ss_dssp --CCEEEEEESTT--HHHHHHH--HHHSCCTTEEEEECS--SHHH-HHHHGGGCSEEEEC--HHHHGGGGGGCTTCCEEE
T ss_pred CccccEEEEecCC--CHHHHHH--HhhccCCCeEEEeCC--ChhH-HHHHhCCCEEEEEC--CCCCHHHHhhCCCceEEE
Confidence 5566789999887 4666666 7 5554 22211111 2233 34456789999974 356678999999999999
Q ss_pred EcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCC
Q 022233 91 TTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGK 170 (300)
Q Consensus 91 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~ 170 (300)
+.|+|+|+||++++++ ||.|+|+||+++.+||||++++||++.|+++.+++.+++|.|.. . . +.+|+|+
T Consensus 73 ~~~~G~d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~---~-----~--~~~l~g~ 141 (324)
T 3hg7_A 73 STYAGVDVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQS---H-----P--YQGLKGR 141 (324)
T ss_dssp ESSSCCGGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC---C-----C--CCCSTTC
T ss_pred ECCCCCCccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcC---C-----C--Ccccccc
Confidence 9999999999998854 99999999999999999999999999999999999999999972 1 1 6789999
Q ss_pred EEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCC---cccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCC
Q 022233 171 RVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSY---PFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALG 247 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~---~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk 247 (300)
||||||+|.||+++|++|++|||+|++|++++...... ....++++++++||+|++|+|++++|+++|+++.|+.||
T Consensus 142 tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk 221 (324)
T 3hg7_A 142 TLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCK 221 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSC
T ss_pred eEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCC
Confidence 99999999999999999999999999999987543322 234689999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCCCCCC
Q 022233 248 KEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 248 ~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~~nv~ 300 (300)
+|++|||+|||+++|+++|+++|++|+|+||+||||++||+++ +|||++|||+
T Consensus 222 ~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvi 275 (324)
T 3hg7_A 222 PGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLI 275 (324)
T ss_dssp TTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEE
T ss_pred CCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEE
Confidence 9999999999999999999999999999999999999999875 5999999985
No 9
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=4.1e-59 Score=438.93 Aligned_cols=273 Identities=22% Similarity=0.362 Sum_probs=223.9
Q ss_pred CCCeEEEECCCCC------CccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcce
Q 022233 15 DLPRVLLFKPPPD------FHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRL 88 (300)
Q Consensus 15 ~kp~vl~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~ 88 (300)
+..+++++.+.+. .+...+. |++.|+++.+ ...+.++++.+...++++++. ..++++++++++|+||+
T Consensus 26 ~~r~ivll~~~~~~~~~~~~~~~~~~--L~~~~~v~~~--~~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~p~Lk~ 99 (365)
T 4hy3_A 26 TERPLAISAPEPRSLDLIFSDEARAA--LHSKYEIVEA--DPENIAGLGDDILGRARYIIG--QPPLSAETLARMPALRS 99 (365)
T ss_dssp --CCEEEEECTTSCHHHHCCHHHHHH--HHHHSEEEEC--CGGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTCTTCCE
T ss_pred CCCCEEEEcCCcccccccCCHHHHHH--HhCCcEEEEC--CCCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhCCCCeE
Confidence 3445555555421 2223444 8888988742 222233444334456777774 46899999999999999
Q ss_pred EEEc-CCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCccccc
Q 022233 89 VMTT-SAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKL 167 (300)
Q Consensus 89 I~~~-~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l 167 (300)
|++. |+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+|+|.|.+. .... .. +.+|
T Consensus 100 I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~-~~~~--~~--~~~l 174 (365)
T 4hy3_A 100 ILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWG-GEGN--AS--ARLI 174 (365)
T ss_dssp EECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCS-SSST--TS--CCCS
T ss_pred EEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCcccc-cccc--cc--cccc
Confidence 9975 899999999999999999999999999999999999999999999999999999995421 1111 22 7899
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
+|+||||||+|.||+.+|+++++|||+|++||++.... .++ ...++++++++||+|++|+|++++|+++|+++.|
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 253 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGV-EPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAF 253 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTC-EECCHHHHHHSCSEEEECSCSSCC---CCCHHHH
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCe-eeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHH
Confidence 99999999999999999999999999999999975321 133 2468999999999999999999999999999999
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCCCCCC
Q 022233 244 SALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 244 ~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~~nv~ 300 (300)
+.||+|++|||+|||++||++||+++|++|+|+ |+||||++||+++ +|||++|||+
T Consensus 254 ~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvi 310 (365)
T 4hy3_A 254 SSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFI 310 (365)
T ss_dssp HTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEE
T ss_pred hcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEE
Confidence 999999999999999999999999999999998 8999999999875 5999999985
No 10
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=1e-59 Score=439.41 Aligned_cols=270 Identities=27% Similarity=0.423 Sum_probs=230.0
Q ss_pred eEEEECCCCCCccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCCC
Q 022233 18 RVLLFKPPPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLN 97 (300)
Q Consensus 18 ~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~d 97 (300)
||++.+..+...++.+. +.+.+++.. .... ..+.+.+.++++|++++++..++++++++++|+||+|++.|+|+|
T Consensus 2 ki~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~--~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d 76 (334)
T 2pi1_A 2 NVLFTSVPQEDVPFYQE--ALKDLSLKI-YTTD--VSKVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFD 76 (334)
T ss_dssp EEEECSCCTTHHHHHHH--HTTTSEEEE-CSSC--GGGSCHHHHHHCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCT
T ss_pred EEEEEccChhhHHHHHH--HhhcCCEEE-ECCC--CcHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcccc
Confidence 68877655323334444 555556533 2221 122223344689999997788999999999999999999999999
Q ss_pred CCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEec
Q 022233 98 HVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGL 177 (300)
Q Consensus 98 ~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~ 177 (300)
+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|.+.. . .. +.+|+|+||||||+
T Consensus 77 ~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~---~--~~--~~~l~g~tvgIiG~ 149 (334)
T 2pi1_A 77 HIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDS---E--IL--ARELNRLTLGVIGT 149 (334)
T ss_dssp TBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCG---G--GC--BCCGGGSEEEEECC
T ss_pred ccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCcccc---C--cc--ceeccCceEEEECc
Confidence 99999999999999999999999999999999999999999999999999997310 1 12 78999999999999
Q ss_pred ChhHHHHHHHHHhCCCEEEEECCCCCCC---CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEE
Q 022233 178 GSIGSLVAKRLDAFGCSISYNSRTKKPS---VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVIN 254 (300)
Q Consensus 178 G~IG~~~A~~l~~~g~~V~~~~~~~~~~---~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn 254 (300)
|.||+++|++|++|||+|++|+++..+. .+. ...++++++++||+|++|+|++++|+++|+++.|+.||+|++|||
T Consensus 150 G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN 228 (334)
T 2pi1_A 150 GRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGC-VYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLIN 228 (334)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTC-EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEE
T ss_pred CHHHHHHHHHHHHCcCEEEEECCCcchhhHhcCc-eecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEE
Confidence 9999999999999999999999987542 133 245799999999999999999999999999999999999999999
Q ss_pred cCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC---------------C-CCCCCCCCCCC
Q 022233 255 IGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPD---------------V-PKELXXXXXXX 300 (300)
Q Consensus 255 ~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~---------------~-~~~L~~~~nv~ 300 (300)
+|||+++|+++|+++|++|+|+||+||||++||+ + .+|||++|||+
T Consensus 229 ~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvi 290 (334)
T 2pi1_A 229 TARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVI 290 (334)
T ss_dssp CSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEE
T ss_pred CCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEE
Confidence 9999999999999999999999999999999997 2 34799999985
No 11
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=2.3e-58 Score=432.78 Aligned_cols=281 Identities=22% Similarity=0.302 Sum_probs=233.9
Q ss_pred CeEEEECCCCCCcc-ccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEE-eCCCCCCHHHHccCCCcceEEEcCC
Q 022233 17 PRVLLFKPPPDFHL-FGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILS-SGGAPVTAETLRLMPAVRLVMTTSA 94 (300)
Q Consensus 17 p~vl~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~-~~~~~~~~e~l~~~p~Lk~I~~~~~ 94 (300)
.||++++....... +...+.+. .+++..+.....+ ++.+.+.++++|++++ +...++++++++++|+||+|++.|+
T Consensus 3 mki~~~d~~~~~~~~~~~~~~l~-~~~v~~~~~~~~~-~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~~~Lk~I~~~g~ 80 (352)
T 3gg9_A 3 LKIAVLDDYQDAVRKLDCFSLLQ-DHEVKVFNNTVKG-VGQLAARVADVEALVLIRERTRVTRQLLDRLPKLKIISQTGR 80 (352)
T ss_dssp CEEEECCCTTCCGGGSGGGGGGT-TSEEEECCSCCCS-HHHHHHHTTTCSEEEECTTSSCBCHHHHTTCTTCCEEEESSC
T ss_pred eEEEEEcCccccchhhhhhhhhc-CceEEEecCCCCC-HHHHHHHhcCCeEEEEeCCCCCCCHHHHhhCCCCeEEEEeCc
Confidence 58999877632211 11111254 3776553332223 3444556689999998 4568999999999999999999999
Q ss_pred CC----CCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccC-CCccc-cCcccccC
Q 022233 95 GL----NHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAE-GDCYS-LGIGSKLG 168 (300)
Q Consensus 95 G~----d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~-~~~~~-~~~g~~l~ 168 (300)
|+ |+||+++|+++||.|+|+||+ +.+||||++++||++.|+++.+++.+++|.|...... ..|.+ ...|.+|+
T Consensus 81 G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~ 159 (352)
T 3gg9_A 81 VSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLK 159 (352)
T ss_dssp CCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCT
T ss_pred ccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCC
Confidence 99 999999999999999999999 9999999999999999999999999999999732100 01110 01278999
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC----CCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP----SVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~----~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
|+||||||+|.||+++|+++++|||+|++|+++... ..++....++++++++||+|++|+|++++|+++|+++.|+
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~ 239 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLT 239 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHh
Confidence 999999999999999999999999999999987532 1244455699999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCCCCCC
Q 022233 245 ALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 245 ~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~~nv~ 300 (300)
.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+++ +|||++|||+
T Consensus 240 ~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvi 296 (352)
T 3gg9_A 240 RMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCI 296 (352)
T ss_dssp TSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEE
T ss_pred hCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEE
Confidence 9999999999999999999999999999999999999999999874 5999999984
No 12
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=3.7e-58 Score=428.80 Aligned_cols=277 Identities=44% Similarity=0.779 Sum_probs=242.9
Q ss_pred cCCC-CCeEEEECCCCCCccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEE
Q 022233 12 ESQD-LPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVM 90 (300)
Q Consensus 12 ~~~~-kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~ 90 (300)
.+-| ||+||++.+. .+...+. +++.+++..+.. ..+.++++.+.++++|++++++..++++++++++|+||+|+
T Consensus 18 ~~~m~~~~vl~~~~~--~~~~~~~--l~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~p~Lk~I~ 92 (333)
T 3ba1_A 18 GSHMEAIGVLMMCPM--STYLEQE--LDKRFKLFRYWT-QPAQRDFLALQAESIRAVVGNSNAGADAELIDALPKLEIVS 92 (333)
T ss_dssp ----CCCEEEECSCC--CHHHHHH--HHHHSEEEEGGG-CSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHCTTCCEEE
T ss_pred cccCCCCEEEEeCCC--CHHHHHH--HHhcCCEEEecC-CCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhCCCCcEEE
Confidence 3444 6899998876 4655555 777788755322 22345656666789999998777789999999999999999
Q ss_pred EcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCC
Q 022233 91 TTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGK 170 (300)
Q Consensus 91 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~ 170 (300)
+.|+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|.. . .+ +. +.++.|+
T Consensus 93 ~~~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~---~-~~-~~--~~~l~g~ 165 (333)
T 3ba1_A 93 SFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKF---G-DF-KL--TTKFSGK 165 (333)
T ss_dssp ESSSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGG---C-CC-CC--CCCCTTC
T ss_pred EcCccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc---c-cc-cc--ccccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999962 1 12 23 7789999
Q ss_pred EEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCc
Q 022233 171 RVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEG 250 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga 250 (300)
+|||||+|+||+.+|++++++|++|++|+++.....+.....++++++++||+|++|+|.+++|+++++++.++.||+|+
T Consensus 166 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~ga 245 (333)
T 3ba1_A 166 RVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKG 245 (333)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCC
Confidence 99999999999999999999999999999987665455556789999999999999999999999999999999999999
Q ss_pred EEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCC
Q 022233 251 VVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXXX 300 (300)
Q Consensus 251 ~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv~ 300 (300)
+|||+|||.++|+++|.++|++|+++||+||||++||++++|||++|||+
T Consensus 246 ilIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nvi 295 (333)
T 3ba1_A 246 VLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVV 295 (333)
T ss_dssp EEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEE
T ss_pred EEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEE
Confidence 99999999999999999999999999999999999998777999999974
No 13
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=6.4e-59 Score=432.07 Aligned_cols=262 Identities=20% Similarity=0.322 Sum_probs=227.4
Q ss_pred CeEEEECCCCCCccccchhhhcccC---eEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHH-ccCCCcceEEEc
Q 022233 17 PRVLLFKPPPDFHLFGDECFSSNKF---KFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETL-RLMPAVRLVMTT 92 (300)
Q Consensus 17 p~vl~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l-~~~p~Lk~I~~~ 92 (300)
.|||++.++ .++..+. |++.+ ++.. .. +... +.++++|+++++. .++ ++++ +.+|+||||++.
T Consensus 2 ~kil~~~~~--~~~~~~~--L~~~~~~~~~~~-~~-~~~~-----~~~~~ad~l~~~~-~~~-~~~l~~~~~~Lk~I~~~ 68 (324)
T 3evt_A 2 SLVLMAQAT--KPEQLQQ--LQTTYPDWTFKD-AA-AVTA-----ADYDQIEVMYGNH-PLL-KTILARPTNQLKFVQVI 68 (324)
T ss_dssp CEEEECSCC--CHHHHHH--HHHHCTTCEEEE-TT-SCCT-----TTGGGEEEEESCC-THH-HHHHHSTTCCCCEEECS
T ss_pred cEEEEecCC--CHHHHHH--HHhhCCCeEEec-CC-ccCh-----HHhCCcEEEEECC-cCh-HHHHHhhCCCceEEEEC
Confidence 579999887 5666666 77654 3332 21 1111 2236799988754 356 8999 789999999999
Q ss_pred CCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHH-HHHHHhCCCCCcccCCCccccCcccccCCCE
Q 022233 93 SAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISAS-DRFVKQWLRPRQAAEGDCYSLGIGSKLGGKR 171 (300)
Q Consensus 93 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~-~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~ 171 (300)
|+|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+ ++.+++|.|.. . .. +.+|+|+|
T Consensus 69 ~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~---~----~~--~~~l~gkt 139 (324)
T 3evt_A 69 SAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWAL---P----MT--TSTLTGQQ 139 (324)
T ss_dssp SSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSC---S----SC--CCCSTTCE
T ss_pred CccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCccc---C----CC--CccccCCe
Confidence 999999999999999999999999999999999999999999999999 99999999982 1 11 67899999
Q ss_pred EEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCC---cccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCC
Q 022233 172 VGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSY---PFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGK 248 (300)
Q Consensus 172 vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~---~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ 248 (300)
|||||+|.||+.+|++|++|||+|++|++++.+.... ....++++++++||+|++|+|++++|+++|+++.|+.||+
T Consensus 140 vGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~ 219 (324)
T 3evt_A 140 LLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQ 219 (324)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCS
T ss_pred EEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCC
Confidence 9999999999999999999999999999987654322 2246899999999999999999999999999999999999
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCCCCCC
Q 022233 249 EGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 249 ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~~nv~ 300 (300)
|++|||+|||+++|+++|+++|++|+|+||+||||++||+++ +|||++|||+
T Consensus 220 gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvi 272 (324)
T 3evt_A 220 QPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVL 272 (324)
T ss_dssp CCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEE
T ss_pred CCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEE
Confidence 999999999999999999999999999999999999999875 5999999984
No 14
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=3e-58 Score=430.26 Aligned_cols=273 Identities=20% Similarity=0.326 Sum_probs=226.5
Q ss_pred CeEEEECCCCCCccccchhhhcc-cCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHH-HHccCC--CcceEEEc
Q 022233 17 PRVLLFKPPPDFHLFGDECFSSN-KFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAE-TLRLMP--AVRLVMTT 92 (300)
Q Consensus 17 p~vl~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e-~l~~~p--~Lk~I~~~ 92 (300)
.||++++..+...++.+. ++++ .+++.... ...+ ++ +.+.++++|++++++..+++++ +++++| +||+|++.
T Consensus 2 mki~~~~~~~~~~~~~~~-~~~~~~~~v~~~~-~~~~-~~-~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~ 77 (343)
T 2yq5_A 2 TKIAMYNVSPIEVPYIED-WAKKNDVEIKTTD-QALT-SA-TVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLR 77 (343)
T ss_dssp CEEEEESCCGGGHHHHHH-HHHHHTCEEEEES-SCCS-TT-GGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEES
T ss_pred ceEEEEecCcccHHHHHH-HHHhCCeEEEECC-CCCC-HH-HHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEEC
Confidence 478888743212223322 1222 35554422 2222 23 2345689999999877899999 999986 69999999
Q ss_pred CCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHH-hCCCCCcccCCCccccCcccccCCCE
Q 022233 93 SAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK-QWLRPRQAAEGDCYSLGIGSKLGGKR 171 (300)
Q Consensus 93 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~-~g~w~~~~~~~~~~~~~~g~~l~g~~ 171 (300)
|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.++ +|+|.+. . . .. +.+|+|+|
T Consensus 78 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~--~-~--~~--~~~l~gkt 150 (343)
T 2yq5_A 78 IVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWP--S-N--LI--SNEIYNLT 150 (343)
T ss_dssp SSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCC--G-G--GC--BCCGGGSE
T ss_pred ceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccc--c-C--CC--ccccCCCe
Confidence 99999999999999999999999999999999999999999999999999999 9987621 1 1 22 78999999
Q ss_pred EEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCc
Q 022233 172 VGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEG 250 (300)
Q Consensus 172 vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga 250 (300)
|||||+|.||+.+|+++++|||+|++|+++..+.. ....+.++++++++||+|++|+|++++|+++|+++.|+.||+|+
T Consensus 151 vgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga 230 (343)
T 2yq5_A 151 VGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSA 230 (343)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTC
T ss_pred EEEEecCHHHHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCc
Confidence 99999999999999999999999999999875422 22234589999999999999999999999999999999999999
Q ss_pred EEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC--CCC------------CCCCCCCCC
Q 022233 251 VVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPD--VPK------------ELXXXXXXX 300 (300)
Q Consensus 251 ~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~--~~~------------~L~~~~nv~ 300 (300)
+|||+|||+++|++||+++|++|+|+||+||||++||+ +.+ |||++|||+
T Consensus 231 ilIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvi 294 (343)
T 2yq5_A 231 YLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVV 294 (343)
T ss_dssp EEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEE
T ss_pred EEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEE
Confidence 99999999999999999999999999999999999993 332 699999985
No 15
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-57 Score=423.35 Aligned_cols=269 Identities=27% Similarity=0.412 Sum_probs=233.3
Q ss_pred CCeEEEECCCCCCccccchhhhccc-CeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCC
Q 022233 16 LPRVLLFKPPPDFHLFGDECFSSNK-FKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSA 94 (300)
Q Consensus 16 kp~vl~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~ 94 (300)
.+|||++.+. .+...+. +++. +++.. .. ..+.+++ .+.++++|++++++..++++++++++|+||||++.|+
T Consensus 26 ~~~vli~~~~--~~~~~~~--l~~~~~~v~~-~~-~~~~~~~-~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~I~~~~~ 98 (335)
T 2g76_A 26 LRKVLISDSL--DPCCRKI--LQDGGLQVVE-KQ-NLSKEEL-IAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGT 98 (335)
T ss_dssp CCEEEECSCC--CHHHHHH--HHHHTCEEEE-CC-SCCHHHH-HHHGGGCSEEEECSSSCBCHHHHHHCSSCCEEEESSS
T ss_pred ceEEEEcCCC--CHHHHHH--HHhCCCEEEE-CC-CCCHHHH-HHHhcCceEEEEcCCCCCCHHHHhhCCCCcEEEECCC
Confidence 3588888775 4544444 5554 56543 22 2234444 4445799999988777899999999999999999999
Q ss_pred CCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEE
Q 022233 95 GLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGI 174 (300)
Q Consensus 95 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgI 174 (300)
|+|+||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.. . .+ . +.++.|++|||
T Consensus 99 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~---~-~~--~--~~~l~g~tvgI 170 (335)
T 2g76_A 99 GVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWER---K-KF--M--GTELNGKTLGI 170 (335)
T ss_dssp SCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCT---G-GG--C--BCCCTTCEEEE
T ss_pred CcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCc---c-CC--C--CcCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999999999972 1 11 2 67899999999
Q ss_pred EecChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCc
Q 022233 175 VGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEG 250 (300)
Q Consensus 175 iG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga 250 (300)
||+|.||+.+|+++++|||+|++||++..+. .+.. ..++++++++||+|++|+|++++|+++|+++.|+.||+|+
T Consensus 171 IGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga 249 (335)
T 2g76_A 171 LGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGV 249 (335)
T ss_dssp ECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCE-ECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTE
T ss_pred EeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCce-eCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCc
Confidence 9999999999999999999999999876431 1332 3589999999999999999999999999999999999999
Q ss_pred EEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCC
Q 022233 251 VVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXXX 300 (300)
Q Consensus 251 ~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv~ 300 (300)
+|||+|||+++|+++|+++|++|+|+||+||||+.||++++|||++|||+
T Consensus 250 ilIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvi 299 (335)
T 2g76_A 250 RVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVI 299 (335)
T ss_dssp EEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEE
T ss_pred EEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEE
Confidence 99999999999999999999999999999999999996667999999984
No 16
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=9.8e-57 Score=421.18 Aligned_cols=289 Identities=23% Similarity=0.361 Sum_probs=233.6
Q ss_pred cCCCCCCcCCCCCeEEEECCCCCCccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCC
Q 022233 5 HGHGKEKESQDLPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMP 84 (300)
Q Consensus 5 ~~~~~~~~~~~kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p 84 (300)
|.+|-.-..+.||+|+++++.....+ .+. ++..+++..+ +. .+.++++++...++|+++++...++++++++++|
T Consensus 10 ~~~~~~~~~~~kp~i~~l~~~~~~~~-~~~--l~~~~~~~~~-~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 84 (347)
T 1mx3_A 10 HSSGLVPRGSHMPLVALLDGRDCTVE-MPI--LKDVATVAFC-DA-QSTQEIHEKVLNEAVGALMYHTITLTREDLEKFK 84 (347)
T ss_dssp -----------CCEEEESSCSCCTTT-HHH--HTTTCEEEEC-CC-SSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCS
T ss_pred cccccCCCCCCCCEEEEEcCCcchhh-HHH--hhccceEEec-CC-CCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCC
Confidence 66777777788999999986422221 333 6777776553 22 2334444433357888888777789999999999
Q ss_pred CcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccC-CCccccCc
Q 022233 85 AVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAE-GDCYSLGI 163 (300)
Q Consensus 85 ~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~-~~~~~~~~ 163 (300)
+||+|++.|+|+|+||+++|+++||.|+|+|++++++||||++++||++.|++..+++.+++|.|...... ..+ .. .
T Consensus 85 ~Lk~I~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~-~~-~ 162 (347)
T 1mx3_A 85 ALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREV-AS-G 162 (347)
T ss_dssp SCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHH-TT-T
T ss_pred CCCEEEEcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccccccccccc-cc-C
Confidence 99999999999999999999999999999999999999999999999999999999999999999621000 000 01 0
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----CCcccCCHHHHhhcCCEEEEecCCChhhhhcch
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----SYPFYSNVCELAANCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~ 239 (300)
+.++.|++|||||+|+||+.+|++|+++||+|++|+++..+.. +.....++++++++||+|++|+|++++|+++|+
T Consensus 163 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 242 (347)
T 1mx3_A 163 AARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN 242 (347)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS
T ss_pred ccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH
Confidence 2689999999999999999999999999999999998765421 333445899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC--CCCCCCCCCC
Q 022233 240 KQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP--KELXXXXXXX 300 (300)
Q Consensus 240 ~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~--~~L~~~~nv~ 300 (300)
++.|+.||+|++|||+|||+++|+++|.++|++|+|+||+||||+.||++. +|||.+|||+
T Consensus 243 ~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi 305 (347)
T 1mx3_A 243 DFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLI 305 (347)
T ss_dssp HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEE
T ss_pred HHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEE
Confidence 999999999999999999999999999999999999999999999999863 5899999984
No 17
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.2e-57 Score=416.58 Aligned_cols=270 Identities=30% Similarity=0.484 Sum_probs=232.4
Q ss_pred CCCeEEEECCCCCCccccchhhhcc-cCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcC
Q 022233 15 DLPRVLLFKPPPDFHLFGDECFSSN-KFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTS 93 (300)
Q Consensus 15 ~kp~vl~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~ 93 (300)
|++||+++.+. .+...+. +++ .+++.. ....+.++ +.+.++++|++++++..++++++++++|+||+|++.|
T Consensus 2 ~~~~il~~~~~--~~~~~~~--l~~~~~~~~~--~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~ 74 (307)
T 1wwk_A 2 KRMKVLVAAPL--HEKAIQV--LKDAGLEVIY--EEYPDEDR-LVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAG 74 (307)
T ss_dssp --CEEEECSCC--CHHHHHH--HHHTTCEEEE--CSSCCHHH-HHHHSTTCSEEEESSCSCBCHHHHTTCTTCCEEEESS
T ss_pred CceEEEEeCCC--CHHHHHH--HHhCCeEEEe--CCCCCHHH-HHHHhcCCEEEEEcCCCCCCHHHHhhCCCCeEEEECC
Confidence 46789998875 4444444 555 355543 22223334 4445689999998766679999999999999999999
Q ss_pred CCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEE
Q 022233 94 AGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVG 173 (300)
Q Consensus 94 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vg 173 (300)
+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|+++.+++.+++|.|.+ . .+ . +.++.|++||
T Consensus 75 ~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~-~~--~--~~~l~g~~vg 146 (307)
T 1wwk_A 75 VGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAK---K-EA--M--GIELEGKTIG 146 (307)
T ss_dssp SCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCT---T-TC--C--BCCCTTCEEE
T ss_pred ccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc---c-Cc--C--CcccCCceEE
Confidence 9999999999999999999999999999999999999999999999999999999972 1 11 2 6789999999
Q ss_pred EEecChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCC
Q 022233 174 IVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKE 249 (300)
Q Consensus 174 IiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~g 249 (300)
|||+|.||+.+|++++++|++|++|+++.... .+.. ..++++++++||+|++|+|++++|+++++++.++.||+|
T Consensus 147 IiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~g 225 (307)
T 1wwk_A 147 IIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGK-FVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKT 225 (307)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTT
T ss_pred EEccCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCcc-ccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCC
Confidence 99999999999999999999999999987531 2333 358999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCC-CCCCCCCCCCC
Q 022233 250 GVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDV-PKELXXXXXXX 300 (300)
Q Consensus 250 a~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~-~~~L~~~~nv~ 300 (300)
+++||+|||+++|+++|.++|++|+|+||+||||+.||++ ++|||++|||+
T Consensus 226 a~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nvi 277 (307)
T 1wwk_A 226 AILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVV 277 (307)
T ss_dssp CEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEE
T ss_pred eEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEE
Confidence 9999999999999999999999999999999999999985 46899999984
No 18
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=2.5e-56 Score=413.13 Aligned_cols=271 Identities=30% Similarity=0.467 Sum_probs=234.2
Q ss_pred CeEEEECCCCCCccccchhhhccc-CeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCC
Q 022233 17 PRVLLFKPPPDFHLFGDECFSSNK-FKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAG 95 (300)
Q Consensus 17 p~vl~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G 95 (300)
||||++.+. .++..+. +++. +++........+.++ +.+.++++|+++++...++++++++++|+||+|++.|+|
T Consensus 1 ~~vl~~~~~--~~~~~~~--l~~~g~~v~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~i~~~~~G 75 (311)
T 2cuk_A 1 MRVLVTRTL--PGKALDR--LRERGLEVEVHRGLFLPKAE-LLKRVEGAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVG 75 (311)
T ss_dssp CEEEESSCC--SSSTTHH--HHHTTCEEEECCSSCCCHHH-HHHHHTTCSEEECCTTSCBCHHHHHHSTTCCEEECSSSC
T ss_pred CEEEEeCCC--CHHHHHH--HHhcCCeEEEecCCCCCHHH-HHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcC
Confidence 578888775 4555555 7776 776542222223344 444568999999876678999999999999999999999
Q ss_pred CCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEE
Q 022233 96 LNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIV 175 (300)
Q Consensus 96 ~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIi 175 (300)
+|+||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.... ... .. +.++.|++||||
T Consensus 76 ~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~~~--~~--~~~l~g~~vgII 150 (311)
T 2cuk_A 76 VDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWH-PEL--LL--GLDLQGLTLGLV 150 (311)
T ss_dssp CTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC-TTT--TC--BCCCTTCEEEEE
T ss_pred ccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccc-ccc--cc--CcCCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999996211 101 12 678999999999
Q ss_pred ecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEc
Q 022233 176 GLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVINI 255 (300)
Q Consensus 176 G~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~ 255 (300)
|+|.||+.+|++++++|++|++|+++..... . ...++++++++||+|++|+|++++|+++++++.++.||+|+++||+
T Consensus 151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~ 228 (311)
T 2cuk_A 151 GMGRIGQAVAKRALAFGMRVVYHARTPKPLP-Y-PFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNT 228 (311)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEEC
T ss_pred EECHHHHHHHHHHHHCCCEEEEECCCCcccc-c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEEC
Confidence 9999999999999999999999999876543 2 3568999999999999999999999999999999999999999999
Q ss_pred CCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCCCCCC
Q 022233 256 GRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 256 srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~~nv~ 300 (300)
|||+++|+++|.++|+ |+|+||+||||++||++. +|||++|||+
T Consensus 229 srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nvi 273 (311)
T 2cuk_A 229 ARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAV 273 (311)
T ss_dssp SCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEE
T ss_pred CCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEE
Confidence 9999999999999999 999999999999999764 5899999984
No 19
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.5e-56 Score=416.25 Aligned_cols=274 Identities=26% Similarity=0.443 Sum_probs=234.8
Q ss_pred CeEEEECCCCCCccccchhhhcccCeEEEecCCC-CChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCC-cceEEEcCC
Q 022233 17 PRVLLFKPPPDFHLFGDECFSSNKFKFLKAWESP-LPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPA-VRLVMTTSA 94 (300)
Q Consensus 17 p~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~-Lk~I~~~~~ 94 (300)
++||++.+. .+...+. +++.+++....... .+.++ +.+.++++|+++++...++++++++++|+ ||||++.|+
T Consensus 2 ~~vl~~~~~--~~~~~~~--l~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~Lk~I~~~~~ 76 (320)
T 1gdh_A 2 KKILITWPL--PEAAMAR--ARESYDVIAHGDDPKITIDE-MIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSI 76 (320)
T ss_dssp CEEEESSCC--CHHHHHH--HHTTSEEEECCSTTCCCHHH-HHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESS
T ss_pred cEEEEcCCC--CHHHHHH--HHhcCCEEEecCCCCCCHHH-HHHHhcCCEEEEECCCCCCCHHHHHhCCccceEEEECCc
Confidence 578888765 4555555 77777764322221 23344 44456899999988767899999999999 999999999
Q ss_pred CCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEE
Q 022233 95 GLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGI 174 (300)
Q Consensus 95 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgI 174 (300)
|+|+||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.... ... .. +.++.|++|||
T Consensus 77 G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~--~~--~~~l~g~~vgI 151 (320)
T 1gdh_A 77 GFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWE-PLE--LV--GEKLDNKTLGI 151 (320)
T ss_dssp CCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC-TTT--TC--BCCCTTCEEEE
T ss_pred ccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccc-ccc--cc--CcCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999996211 001 12 67899999999
Q ss_pred EecChhHHHHHHHHHhCCCEEEEECC-CCCCC----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCC
Q 022233 175 VGLGSIGSLVAKRLDAFGCSISYNSR-TKKPS----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKE 249 (300)
Q Consensus 175 iG~G~IG~~~A~~l~~~g~~V~~~~~-~~~~~----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~g 249 (300)
||+|+||+++|++++++|++|++|++ +.... .+.....++++++++||+|++|+|++++|+++++++.++.||+|
T Consensus 152 IG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~g 231 (320)
T 1gdh_A 152 YGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQG 231 (320)
T ss_dssp ECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTT
T ss_pred ECcCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCC
Confidence 99999999999999999999999999 76532 13333448999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCC
Q 022233 250 GVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXXX 300 (300)
Q Consensus 250 a~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv~ 300 (300)
++|||+|||+++|+++|.++|++|+|+||+||||+.||...+|||++|||+
T Consensus 232 ailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nvi 282 (320)
T 1gdh_A 232 AIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTF 282 (320)
T ss_dssp EEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEE
T ss_pred cEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEE
Confidence 999999999999999999999999999999999999994456999999985
No 20
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=1.9e-56 Score=417.40 Aligned_cols=272 Identities=19% Similarity=0.296 Sum_probs=228.4
Q ss_pred eEEEECCCCCCccccchhhhcccCe--EEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCC--cceEEEcC
Q 022233 18 RVLLFKPPPDFHLFGDECFSSNKFK--FLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPA--VRLVMTTS 93 (300)
Q Consensus 18 ~vl~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~--Lk~I~~~~ 93 (300)
||+++...+......+. +.+.++ +.. .....+.++ +.+.++++|++++++..++++++++++|+ ||+|++.|
T Consensus 2 ki~~~~~~~~~~~~~~~--l~~~~~~~~~~-~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~ 77 (331)
T 1xdw_A 2 KVLCYGVRDVELPIFEA--CNKEFGYDIKC-VPDYLNTKE-TAEMAAGFDAVILRGNCFANKQNLDIYKKLGVKYILTRT 77 (331)
T ss_dssp EEEECSCCTTTHHHHHH--HGGGTCCEEEE-CSCCSCSHH-HHHTTTTCSEEEECTTCCBCHHHHHHHHHHTCCEEEESS
T ss_pred EEEEEecCccCHHHHHH--HHHhcCeEEEE-CCCCCCHHH-HHHHhcCCeEEEEeCCCCCCHHHHhhCcccCceEEEEcc
Confidence 68886543323333444 554443 332 222222233 34456899999998778899999999998 99999999
Q ss_pred CCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEE
Q 022233 94 AGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVG 173 (300)
Q Consensus 94 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vg 173 (300)
+|+||||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.+. . .+ . +.++.|++||
T Consensus 78 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~--~-~~--~--~~~l~g~~vg 150 (331)
T 1xdw_A 78 AGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVD--A-FM--F--SKEVRNCTVG 150 (331)
T ss_dssp SCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCC--S-TT--C--CCCGGGSEEE
T ss_pred ccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccc--c-Cc--C--ccCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999621 1 11 2 6789999999
Q ss_pred EEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEE
Q 022233 174 IVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVV 252 (300)
Q Consensus 174 IiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~l 252 (300)
|||+|.||+.+|+++++|||+|++|+++..... ....+.++++++++||+|++|+|++++|+++|+++.|+.||+|+++
T Consensus 151 IiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~l 230 (331)
T 1xdw_A 151 VVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAIL 230 (331)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEE
T ss_pred EECcCHHHHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEE
Confidence 999999999999999999999999998765431 1123458999999999999999999999999999999999999999
Q ss_pred EEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC--CC--------C----CCCCC-CCCC
Q 022233 253 INIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPD--VP--------K----ELXXX-XXXX 300 (300)
Q Consensus 253 In~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~--~~--------~----~L~~~-~nv~ 300 (300)
||+|||+++|+++|+++|++|+|+||+||||++||+ ++ + |||++ |||+
T Consensus 231 in~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvi 293 (331)
T 1xdw_A 231 VNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVL 293 (331)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEE
T ss_pred EECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEE
Confidence 999999999999999999999999999999999994 21 2 69999 9985
No 21
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=9.9e-57 Score=416.06 Aligned_cols=260 Identities=21% Similarity=0.295 Sum_probs=220.6
Q ss_pred CCCeEEEECCCCCCccccchhhhcccC---eEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEE
Q 022233 15 DLPRVLLFKPPPDFHLFGDECFSSNKF---KFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMT 91 (300)
Q Consensus 15 ~kp~vl~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~ 91 (300)
|..||+++.+....+.+.+. +++.+ ++.. +.. . ..+++|+++++. .++++++. |+||+|++
T Consensus 2 ~~mkil~~~~~~~~~~~~~~--l~~~~p~~~~~~-~~~-~--------~~~~ad~~i~~~---~~~~~l~~-~~Lk~I~~ 65 (315)
T 3pp8_A 2 NAMEIIFYHPTFNAAWWVNA--LEKALPHARVRE-WKV-G--------DNNPADYALVWQ---PPVEMLAG-RRLKAVFV 65 (315)
T ss_dssp CCEEEEEECSSSCHHHHHHH--HHHHSTTEEEEE-CCT-T--------CCSCCSEEEESS---CCHHHHTT-CCCSEEEE
T ss_pred CceEEEEEcCCCchHHHHHH--HHHHCCCCEEEe-cCC-C--------CccCcEEEEECC---CCHHHhCC-CCceEEEE
Confidence 34579988775212334444 66555 2322 221 1 125899999863 58999999 99999999
Q ss_pred cCCCCCCC-C-hhH---HhhCCeEEEeCCCCC-chhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCccc
Q 022233 92 TSAGLNHV-D-IAE---CRRRGITVANAGNVF-SEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGS 165 (300)
Q Consensus 92 ~~~G~d~i-d-~~~---~~~~gI~v~n~p~~~-~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~ 165 (300)
.|+|+||| | +++ +.++||.|+|++++. +.+||||+++++|++.|++..+++.+++|.|.. . . +.
T Consensus 66 ~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~---~-----~--~~ 135 (315)
T 3pp8_A 66 LGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKP---L-----P--EY 135 (315)
T ss_dssp SSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC---C-----C--CC
T ss_pred CCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCC---C-----C--CC
Confidence 99999999 7 887 788999999998764 799999999999999999999999999999972 1 1 67
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcc---cCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPF---YSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~---~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
+++|+||||||+|.||+.+|+++++|||+|++|++++....+... ..++++++++||+|++|+|++++|+++|+++.
T Consensus 136 ~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~ 215 (315)
T 3pp8_A 136 TREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSEL 215 (315)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHH
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHH
Confidence 899999999999999999999999999999999998765443322 25899999999999999999999999999999
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCCCCCC
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~~nv~ 300 (300)
|+.||+|++|||+|||++||+++|+++|++|+|+||+||||++||+++ +|||++|||+
T Consensus 216 l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvi 274 (315)
T 3pp8_A 216 LDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVA 274 (315)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEE
T ss_pred HhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEE
Confidence 999999999999999999999999999999999999999999999875 5999999984
No 22
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.5e-56 Score=422.71 Aligned_cols=275 Identities=21% Similarity=0.281 Sum_probs=230.3
Q ss_pred CCCeEEEECCCCCCccccchhhhccc-CeEEEecCCCCChHHHHHhccCCcEEEEEeC--CCCCCHHHHccCCCcceEEE
Q 022233 15 DLPRVLLFKPPPDFHLFGDECFSSNK-FKFLKAWESPLPLDQFLKTHAQSVEAILSSG--GAPVTAETLRLMPAVRLVMT 91 (300)
Q Consensus 15 ~kp~vl~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~--~~~~~~e~l~~~p~Lk~I~~ 91 (300)
.||+||+.+.. .+.+.+. +++. +++..+.....+.++ +.+.++++|+++++. ..++++++++++|+||+|++
T Consensus 16 ~~~~vl~~d~~--~~~~~~~--l~~~~~~v~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~l~~~~~Lk~I~~ 90 (364)
T 2j6i_A 16 DEEKLYGCTEN--KLGIANW--LKDQGHELITTSDKEGGNSV-LDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVV 90 (364)
T ss_dssp HCTTCTTBTTT--GGGCHHH--HHHTTCEEEEESCCSSTTSH-HHHHGGGCSEEEECTTSCCCBCHHHHHHCTTCCEEEE
T ss_pred cCceEEEecCc--cHHHHHH--HHhCCCEEEEcCCCCCCHHH-HHHHhhCCeEEEecCcCCCCCCHHHHhhCCCCeEEEE
Confidence 45677777664 3444444 5543 565443222212223 344557899998854 24689999999999999999
Q ss_pred cCCCCCCCChhHHhhC--CeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCC
Q 022233 92 TSAGLNHVDIAECRRR--GITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGG 169 (300)
Q Consensus 92 ~~~G~d~id~~~~~~~--gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g 169 (300)
.|+|+||||+++|+++ ||.|+|+|++++.+||||++++||++.|++..+++.+++|.|... .+... +.+|+|
T Consensus 91 ~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~----~~~~~--~~~l~g 164 (364)
T 2j6i_A 91 AGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVA----AIAKD--AYDIEG 164 (364)
T ss_dssp SSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHH----HHHTT--CCCSTT
T ss_pred CCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcC----cccCC--cccCCC
Confidence 9999999999999999 999999999999999999999999999999999999999999721 01012 678999
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCE-EEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCS-ISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~-V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
++|||||+|+||+.+|++|++|||+ |++|+++..+. .+.....++++++++||+|++|+|++++|+++|+++.|
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l 244 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELL 244 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHH
Confidence 9999999999999999999999997 99999876432 13333468999999999999999999999999999999
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCC--C---CCC
Q 022233 244 SALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXX--X---XXX 300 (300)
Q Consensus 244 ~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~--~---nv~ 300 (300)
+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+++ +|||.+ | ||+
T Consensus 245 ~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvi 307 (364)
T 2j6i_A 245 SKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNA 307 (364)
T ss_dssp TTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEE
T ss_pred hhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEE
Confidence 99999999999999999999999999999999999999999999875 589999 9 984
No 23
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.2e-56 Score=418.87 Aligned_cols=271 Identities=20% Similarity=0.323 Sum_probs=226.4
Q ss_pred eEEEECCCCCCccccchhhhccc--CeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCC--cceEEEcC
Q 022233 18 RVLLFKPPPDFHLFGDECFSSNK--FKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPA--VRLVMTTS 93 (300)
Q Consensus 18 ~vl~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~--Lk~I~~~~ 93 (300)
||+++...+......+. +.+. +++.. .....+ ++ +.+.++++|++++++..++++++++++|+ ||+|++.|
T Consensus 2 kil~~~~~~~~~~~~~~--l~~~~~~~v~~-~~~~~~-~~-~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~ 76 (333)
T 1dxy_A 2 KIIAYGARVDEIQYFKQ--WAKDTGNTLEY-HTEFLD-EN-TVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRN 76 (333)
T ss_dssp EEEECSCCTTTHHHHHH--HHHHHCCEEEE-CSSCCC-TT-GGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESS
T ss_pred EEEEEeccccCHHHHHH--HHHhCCeEEEE-cCCCCh-HH-HHHHhcCCeEEEEcCCCCCCHHHHHhCcccCceEEEEcC
Confidence 57876543223333333 4433 34433 222211 22 33445799999997778899999999988 99999999
Q ss_pred CCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEE
Q 022233 94 AGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVG 173 (300)
Q Consensus 94 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vg 173 (300)
+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.+. .. + . +.++.|++||
T Consensus 77 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~--~~-~--~--~~~l~g~~vg 149 (333)
T 1dxy_A 77 VGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKA--GT-F--I--GKELGQQTVG 149 (333)
T ss_dssp SCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHH--TC-C--C--CCCGGGSEEE
T ss_pred cccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccc--cC-C--C--ccCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999998510 11 1 2 6789999999
Q ss_pred EEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEE
Q 022233 174 IVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVV 252 (300)
Q Consensus 174 IiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~l 252 (300)
|||+|.||+.+|+++++|||+|++|+++..... ....+.++++++++||+|++|+|++++|+++|+++.|+.||+|++|
T Consensus 150 IiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~l 229 (333)
T 1dxy_A 150 VMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIV 229 (333)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEE
T ss_pred EECcCHHHHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEE
Confidence 999999999999999999999999998765431 1123458999999999999999999999999999999999999999
Q ss_pred EEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC----------CC----CCCCCCCCCC
Q 022233 253 INIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPD----------VP----KELXXXXXXX 300 (300)
Q Consensus 253 In~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~----------~~----~~L~~~~nv~ 300 (300)
||+|||+++|+++|+++|++|+|+||+||||++||+ ++ +|||++|||+
T Consensus 230 In~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi 291 (333)
T 1dxy_A 230 INTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVV 291 (333)
T ss_dssp EECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEE
T ss_pred EECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEE
Confidence 999999999999999999999999999999999993 12 3699999985
No 24
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=3.3e-56 Score=416.00 Aligned_cols=270 Identities=20% Similarity=0.337 Sum_probs=226.4
Q ss_pred eEEEECCCCCCccccchhhhcccC---eEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCC--cceEEEc
Q 022233 18 RVLLFKPPPDFHLFGDECFSSNKF---KFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPA--VRLVMTT 92 (300)
Q Consensus 18 ~vl~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~--Lk~I~~~ 92 (300)
||+++...+......+. +.+.+ ++.. .....+ ++ +.+.++++|++++++..++++++++++|+ ||+|++.
T Consensus 3 kil~~~~~~~~~~~~~~--l~~~~p~~~v~~-~~~~~~-~~-~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~ 77 (333)
T 1j4a_A 3 KIFAYAIREDEKPFLKE--WEDAHKDVEVEY-TDKLLT-PE-TVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLR 77 (333)
T ss_dssp EEEECSCCGGGHHHHHH--HHHTCTTSEEEE-CSSCCC-TT-TGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEES
T ss_pred EEEEEecCccCHHHHHH--HHhhCCCcEEEE-CCCCCc-HH-HHHHhcCCcEEEEcCCCCCCHHHHHhccccCCeEEEEC
Confidence 68887554222223333 55443 5543 222111 22 33445799999997777899999999988 9999999
Q ss_pred CCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEE
Q 022233 93 SAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRV 172 (300)
Q Consensus 93 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~v 172 (300)
|+|+|+||+++|+++||.|+|+|++++++||||++++||++.|++..+++.+++|.|.+ .. + . +.++.|++|
T Consensus 78 ~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~---~~-~--~--~~~l~g~~v 149 (333)
T 1j4a_A 78 NVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRW---AP-T--I--GREVRDQVV 149 (333)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCC---TT-C--C--BCCGGGSEE
T ss_pred CcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCcc---CC-c--c--cccCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999962 11 1 2 778999999
Q ss_pred EEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC--CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCc
Q 022233 173 GIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV--SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEG 250 (300)
Q Consensus 173 gIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga 250 (300)
||||+|.||+.+|++++++||+|++|+++..+.. ......++++++++||+|++|+|++++|+++|+++.|+.||+|+
T Consensus 150 gIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga 229 (333)
T 1j4a_A 150 GVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDV 229 (333)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTE
T ss_pred EEEccCHHHHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCc
Confidence 9999999999999999999999999999765321 12233489999999999999999999999999999999999999
Q ss_pred EEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC--CC--------C----CCCCCCCCC
Q 022233 251 VVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPD--VP--------K----ELXXXXXXX 300 (300)
Q Consensus 251 ~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~--~~--------~----~L~~~~nv~ 300 (300)
++||+|||+++|+++|+++|++|+|+||+||||++||+ ++ + |||++|||+
T Consensus 230 ~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvi 293 (333)
T 1j4a_A 230 VIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVL 293 (333)
T ss_dssp EEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEE
T ss_pred EEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEE
Confidence 99999999999999999999999999999999999993 22 1 499999985
No 25
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1.3e-55 Score=418.80 Aligned_cols=238 Identities=25% Similarity=0.404 Sum_probs=214.2
Q ss_pred HHhccCCcEEEEEeC--CCCCCHHHHccCCCcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHh
Q 022233 57 LKTHAQSVEAILSSG--GAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLL 134 (300)
Q Consensus 57 l~~~~~~~d~ii~~~--~~~~~~e~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~ 134 (300)
+.+.++++|++++.. ..++++++++++|+||+|++.|+|+||||+++|+++||.|+|+|++++.+||||++++||++.
T Consensus 83 l~~~l~~ad~li~~~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~ 162 (393)
T 2nac_A 83 FERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLV 162 (393)
T ss_dssp HHHHHTTCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCEEEEcCccCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHH
Confidence 334457999998753 457999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCc
Q 022233 135 RNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYP 209 (300)
Q Consensus 135 R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~ 209 (300)
|++..+++.+++|.|... ... .. +.+|+|++|||||+|+||+.+|+++++|||+|++|+++.... .+..
T Consensus 163 R~~~~~~~~~~~g~W~~~---~~~-~~--~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~ 236 (393)
T 2nac_A 163 RNYLPSHEWARKGGWNIA---DCV-SH--AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLT 236 (393)
T ss_dssp TTHHHHHHHHHTTCCCHH---HHH-TT--CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCE
T ss_pred hccHHHHHHHHcCCCCcc---ccc-cC--CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCce
Confidence 999999999999999721 000 12 678999999999999999999999999999999999876432 1333
Q ss_pred ccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCC
Q 022233 210 FYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDV 289 (300)
Q Consensus 210 ~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~ 289 (300)
...++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|.++|++|+|+||+||||++||++
T Consensus 237 ~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~ 316 (393)
T 2nac_A 237 WHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAP 316 (393)
T ss_dssp ECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCC
T ss_pred ecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCC
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred C-CCCCCCCCCC
Q 022233 290 P-KELXXXXXXX 300 (300)
Q Consensus 290 ~-~~L~~~~nv~ 300 (300)
. +|||++|||+
T Consensus 317 ~~~pL~~~~nvi 328 (393)
T 2nac_A 317 KDHPWRTMPYNG 328 (393)
T ss_dssp TTCGGGTSTTBC
T ss_pred CCChhHcCCCEE
Confidence 4 5899999985
No 26
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.4e-55 Score=408.51 Aligned_cols=265 Identities=20% Similarity=0.327 Sum_probs=231.7
Q ss_pred eEEEECCCCCCccccchhhhccc-CeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCC
Q 022233 18 RVLLFKPPPDFHLFGDECFSSNK-FKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGL 96 (300)
Q Consensus 18 ~vl~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~ 96 (300)
|||++.+. .+...+. +++. +++.. ....+.+++ .+.++++|++++++..++++++++++|+||+|++.|+|+
T Consensus 7 kil~~~~~--~~~~~~~--l~~~~~~v~~--~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~ 79 (313)
T 2ekl_A 7 KALITDPI--DEILIKT--LREKGIQVDY--MPEISKEEL-LNIIGNYDIIVVRSRTKVTKDVIEKGKKLKIIARAGIGL 79 (313)
T ss_dssp EEEECSCC--CHHHHHH--HHHTTCEEEE--CTTCCHHHH-HHHGGGCSEEEECSSSCBCHHHHHHCTTCCEEEECSSCC
T ss_pred EEEEECCC--CHHHHHH--HHhCCcEEEe--CCCCCHHHH-HHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEEcCCCC
Confidence 78888775 4544444 6554 55532 222233444 445679999998766789999999999999999999999
Q ss_pred CCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEe
Q 022233 97 NHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVG 176 (300)
Q Consensus 97 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG 176 (300)
|+||+++|+++||.|+|+||+++.+||||++++||++.|+++.+++.+++|.|. . .. +.++.|++|||||
T Consensus 80 d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~----~----~~--~~~l~g~~vgIIG 149 (313)
T 2ekl_A 80 DNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFK----K----IE--GLELAGKTIGIVG 149 (313)
T ss_dssp TTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCC----C----CC--CCCCTTCEEEEES
T ss_pred CccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC----C----CC--CCCCCCCEEEEEe
Confidence 999999999999999999999999999999999999999999999999999996 1 12 6789999999999
Q ss_pred cChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEE
Q 022233 177 LGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVV 252 (300)
Q Consensus 177 ~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~l 252 (300)
+|+||+.+|++++++|++|++|+++.... .+.. ..++++++++||+|++|+|++++|+++++++.++.||+|+++
T Consensus 150 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~l 228 (313)
T 2ekl_A 150 FGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAK-AVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVII 228 (313)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEE
T ss_pred eCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCce-ecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEE
Confidence 99999999999999999999999987532 2333 358999999999999999999999999999999999999999
Q ss_pred EEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCC---CCCCCCCCC
Q 022233 253 INIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPK---ELXXXXXXX 300 (300)
Q Consensus 253 In~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~---~L~~~~nv~ 300 (300)
||+|||+++|+++|.++|++|+|+||+||||++||++++ |||++|||+
T Consensus 229 In~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nvi 279 (313)
T 2ekl_A 229 VNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVI 279 (313)
T ss_dssp EESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEE
T ss_pred EECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEE
Confidence 999999999999999999999999999999999998877 899999984
No 27
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=3e-54 Score=405.05 Aligned_cols=278 Identities=26% Similarity=0.384 Sum_probs=233.0
Q ss_pred CCCeEEEECC-CCCCccccchhhhcccCeEEEecCCCCChHHHHHhcc----CCcEEEEEe------CCCCCCHHHHccC
Q 022233 15 DLPRVLLFKP-PPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHA----QSVEAILSS------GGAPVTAETLRLM 83 (300)
Q Consensus 15 ~kp~vl~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~----~~~d~ii~~------~~~~~~~e~l~~~ 83 (300)
+|||||++++ .+..+...+. |++.++++.+ . ..+.+++++... .++|+|++. ...++++++++++
T Consensus 2 ~~~~vl~~~~~~~~~~~~~~~--l~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ 77 (348)
T 2w2k_A 2 PRPRVLLLGDPARHLDDLWSD--FQQKFEVIPA-N-LTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHL 77 (348)
T ss_dssp CCCEEEECSSCCSSCHHHHHH--HHHHSEEEEC-C-CCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTS
T ss_pred CCcEEEEECCccccChHHHHH--HHhcceEEec-C-CCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhc
Confidence 4789999987 4322333444 7777887553 2 224455554432 278988864 2458999999999
Q ss_pred C-CcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCC---CCCcccCCCcc
Q 022233 84 P-AVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWL---RPRQAAEGDCY 159 (300)
Q Consensus 84 p-~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~---w~~~~~~~~~~ 159 (300)
| +||+|++.|+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|. |.... ...+
T Consensus 78 ~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~-~~~~- 155 (348)
T 2w2k_A 78 PSSLKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVH-LEIG- 155 (348)
T ss_dssp CTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHH-HHHH-
T ss_pred ccCceEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCccccccc-cccc-
Confidence 8 6999999999999999999999999999999999999999999999999999999999999999 94100 0000
Q ss_pred ccCcccccCCCEEEEEecChhHHHHHHHHH-hCCCEEEEECCCCCCCC-----CCcccCCHHHHhhcCCEEEEecCCChh
Q 022233 160 SLGIGSKLGGKRVGIVGLGSIGSLVAKRLD-AFGCSISYNSRTKKPSV-----SYPFYSNVCELAANCDILIICCGLTAE 233 (300)
Q Consensus 160 ~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~-~~g~~V~~~~~~~~~~~-----~~~~~~~l~e~l~~aDvV~l~~p~~~~ 233 (300)
.. +.+|+|++|||||+|.||+.+|++++ ++|++|++||++..... +.....++++++++||+|++|+|.+++
T Consensus 156 ~~--~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~ 233 (348)
T 2w2k_A 156 KS--AHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKL 233 (348)
T ss_dssp TT--CCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGG
T ss_pred cc--CcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChH
Confidence 12 67899999999999999999999999 99999999999865321 333345899999999999999999999
Q ss_pred hhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCC
Q 022233 234 THHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXXX 300 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv~ 300 (300)
|+++++++.++.||+|++|||+|||+++|+++|.++|++|+|.||++|||++||...++||++|||+
T Consensus 234 t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nvi 300 (348)
T 2w2k_A 234 THHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVT 300 (348)
T ss_dssp GTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEE
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEE
Confidence 9999999999999999999999999999999999999999999999999999995445899999985
No 28
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=8.3e-54 Score=399.46 Aligned_cols=279 Identities=25% Similarity=0.378 Sum_probs=234.6
Q ss_pred CcCCCCCeEEEECCCCCCccccchhhhccc--CeEEEecCC-CCChHHHHHhccCCcEEEEEeCCCCCCHHHHccC-CCc
Q 022233 11 KESQDLPRVLLFKPPPDFHLFGDECFSSNK--FKFLKAWES-PLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLM-PAV 86 (300)
Q Consensus 11 ~~~~~kp~vl~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~-~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~-p~L 86 (300)
+...+|+|||++.+. .+...+. +++. +++..+... ..+.+++ .+.++++|++++++..++++++++++ |+|
T Consensus 3 ~~~~~~~~il~~~~~--~~~~~~~--l~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~l~~~~~~L 77 (330)
T 2gcg_A 3 MRPVRLMKVFVTRRI--PAEGRVA--LARAADCEVEQWDSDEPIPAKEL-ERGVAGAHGLLCLLSDHVDKRILDAAGANL 77 (330)
T ss_dssp ----CCEEEEESSCC--CHHHHHH--HHHCTTEEEEECCSSSCCCHHHH-HHHHTTCSEEEECTTSCBCHHHHHHHCTTC
T ss_pred CCCCCCCEEEEECCC--CHHHHHH--HHhcCCceEEEecCCCCCCHHHH-HHHhcCCeEEEECCCCCCCHHHHHhcCCCc
Confidence 444567789998765 4555555 6666 666442211 2233444 44557999999877778999999999 999
Q ss_pred ceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccc
Q 022233 87 RLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSK 166 (300)
Q Consensus 87 k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~ 166 (300)
|||++.|+|+|+||+++++++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|.... . .. .. |.+
T Consensus 78 k~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~-~-~~-~~--~~~ 152 (330)
T 2gcg_A 78 KVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWK-P-LW-LC--GYG 152 (330)
T ss_dssp CEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCC-T-TS-SC--BCC
T ss_pred eEEEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccC-c-cc-cc--CcC
Confidence 9999999999999999999999999999999999999999999999999999999999999997211 1 11 12 678
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHH
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQ 241 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~ 241 (300)
+.|++|||||+|.||+.+|++++++|++|++|+++.... .+... .++++++++||+|++|+|.+++|+++++++
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~ 231 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEF-VSTPELAAQSDFIVVACSLTPATEGLCNKD 231 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBSHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCcee-CCHHHHHhhCCEEEEeCCCChHHHHhhCHH
Confidence 999999999999999999999999999999999876431 13333 389999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCCCCCC
Q 022233 242 VLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 242 ~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~~nv~ 300 (300)
.++.||+|++|||+|||+++|+++|.++|+++++.||+||||++||+++ +|||++|||+
T Consensus 232 ~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi 291 (330)
T 2gcg_A 232 FFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCV 291 (330)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEE
T ss_pred HHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEE
Confidence 9999999999999999999999999999999999999999999999765 5899999974
No 29
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.1e-54 Score=401.23 Aligned_cols=271 Identities=31% Similarity=0.483 Sum_probs=234.7
Q ss_pred CCCeEEEECCCCCCccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCC
Q 022233 15 DLPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSA 94 (300)
Q Consensus 15 ~kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~ 94 (300)
||||||++.+. .+...+. +++.+++.. .. ..+.+++ .+.++++|++++++..++++++++++|+||+|++.|+
T Consensus 1 m~~~il~~~~~--~~~~~~~--l~~~~~~~~-~~-~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~ 73 (333)
T 2d0i_A 1 MRPKVGVLLKM--KREALEE--LKKYADVEI-IL-YPSGEEL-KGVIGRFDGIIVSPTTKITREVLENAERLKVISCHSA 73 (333)
T ss_dssp CCSEEEECSCC--CHHHHHH--HHTTSEEEE-CC-SCCHHHH-HHHGGGCSEEEECTTSCBCHHHHTTCTTCCEEEESSS
T ss_pred CCcEEEEECCC--CHHHHHH--HHhcCCEEE-eC-CCCHHHH-HHHhcCCEEEEECCCCCCCHHHHhhCCCceEEEECCc
Confidence 57899998876 4555555 777777654 22 2233444 4456799999987777899999999999999999999
Q ss_pred CCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcc----cccCCC
Q 022233 95 GLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIG----SKLGGK 170 (300)
Q Consensus 95 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g----~~l~g~ 170 (300)
|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|.... . . .. | .+|.|+
T Consensus 74 G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~--~-~~--~~~~~~~l~g~ 147 (333)
T 2d0i_A 74 GYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHA-K--I-WT--GFKRIESLYGK 147 (333)
T ss_dssp CCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHH-H--H-HT--TSCCCCCSTTC
T ss_pred ccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCc-c--c-cc--CCcccCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999996210 0 0 12 5 789999
Q ss_pred EEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcC
Q 022233 171 RVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSAL 246 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~m 246 (300)
+|||||+|.||+.+|++++++|++|++|+++.... .+.. ..++++++++||+|++|+|.+++|+++++++.++.|
T Consensus 148 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~m 226 (333)
T 2d0i_A 148 KVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKAR-YMDIDELLEKSDIVILALPLTRDTYHIINEERVKKL 226 (333)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEE-ECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHT
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCce-ecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhC
Confidence 99999999999999999999999999999987531 1222 348999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCC-CCC
Q 022233 247 GKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXX-XXX 300 (300)
Q Consensus 247 k~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~-nv~ 300 (300)
|+| ++||+|||.++|+++|.++|++++|+||++|||++||++.+|||++| ||+
T Consensus 227 k~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nvi 280 (333)
T 2d0i_A 227 EGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETV 280 (333)
T ss_dssp BTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEE
T ss_pred CCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEE
Confidence 999 99999999999999999999999999999999999998766899999 974
No 30
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=8.2e-54 Score=400.07 Aligned_cols=275 Identities=32% Similarity=0.497 Sum_probs=234.5
Q ss_pred CCCeEEEECCCCCCccccchhhhcccCeEEEecCC-CCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcC
Q 022233 15 DLPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWES-PLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTS 93 (300)
Q Consensus 15 ~kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~ 93 (300)
|++|||++.+. .+...+. +++.+++...... ..+.++ +.+.++++|+++++...++++++++++|+||||++.|
T Consensus 1 m~~~il~~~~~--~~~~~~~--l~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~l~~~~~Lk~I~~~~ 75 (334)
T 2dbq_A 1 MKPKVFITREI--PEVGIKM--LEDEFEVEVWGDEKEIPREI-LLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYA 75 (334)
T ss_dssp CCCEEEESSCC--CHHHHHH--HHTTSEEEECCCSSCCCHHH-HHHHTTSCSEEEECTTSCBCHHHHHTCTTCCEEEESS
T ss_pred CCcEEEEecCC--CHHHHHH--HHhcCCEEEecCCCCCCHHH-HHHHhcCcEEEEEcCCCCCCHHHHhhCCCceEEEECC
Confidence 45789998765 4555555 7777776542222 123334 4455689999998777789999999999999999999
Q ss_pred CCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCC----CcccCCCccccCcccccCC
Q 022233 94 AGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRP----RQAAEGDCYSLGIGSKLGG 169 (300)
Q Consensus 94 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~----~~~~~~~~~~~~~g~~l~g 169 (300)
+|+|+||+++++++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|. ... ... .. +.++.|
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~-~~~--~~--~~~l~g 150 (334)
T 2dbq_A 76 VGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWH-PKW--FL--GYDVYG 150 (334)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCC-TTT--TC--CCCCTT
T ss_pred cccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccc-ccc--cc--ccCCCC
Confidence 999999999999999999999999999999999999999999999999999999995 110 101 12 678999
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhc
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSA 245 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~ 245 (300)
++|||||+|.||+.+|++++++|++|++|+++.... .+.. ..++++++++||+|++|+|.+++|+++++++.++.
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~ 229 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAE-FKPLEDLLRESDFVVLAVPLTRETYHLINEERLKL 229 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcc-cCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhc
Confidence 999999999999999999999999999999986541 1222 35899999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCC
Q 022233 246 LGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXXX 300 (300)
Q Consensus 246 mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv~ 300 (300)
||+|++|||+|||.++|+++|.++|++|+|+||++|||++||...+|||++|||+
T Consensus 230 mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi 284 (334)
T 2dbq_A 230 MKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVV 284 (334)
T ss_dssp SCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEE
T ss_pred CCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEE
Confidence 9999999999999999999999999999999999999999993345899999984
No 31
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=8.3e-54 Score=403.77 Aligned_cols=245 Identities=24% Similarity=0.355 Sum_probs=209.4
Q ss_pred CCeEEEECCCCCCccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCC
Q 022233 16 LPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAG 95 (300)
Q Consensus 16 kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G 95 (300)
+.|||+...++ ...+. +++..++..+...+.+. + .++++|++++++.+++++++++ .++||+|++.|+|
T Consensus 3 mmkIl~~~~~p---~~~~~--~~~~~~v~~~~~~~~~~-~----~l~~ad~li~~~~~~v~~~ll~-~~~Lk~I~~~~~G 71 (381)
T 3oet_A 3 AMKILVDENMP---YAREL--FSRLGEVKAVPGRPIPV-E----ELNHADALMVRSVTKVNESLLS-GTPINFVGTATAG 71 (381)
T ss_dssp CCEEEEETTST---THHHH--HTTSSEEEEECC---CH-H----HHTTCSEEEECTTSCBSHHHHT-TSCCCEEEESSSC
T ss_pred ceEEEECCCCc---HHHHH--HhhCCcEEEeCCCCCCH-H----HHCCCEEEEECCCCCCCHHHHc-CCCCEEEEEcccc
Confidence 35899987763 23333 66667765432222222 2 2478999999877889999999 5779999999999
Q ss_pred CCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEE
Q 022233 96 LNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIV 175 (300)
Q Consensus 96 ~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIi 175 (300)
+||||+++++++||.|+|+||+++.+||||+++++|++.|+. |.+|+|+|||||
T Consensus 72 ~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~--------------------------g~~l~gktvGII 125 (381)
T 3oet_A 72 TDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD--------------------------GFSLRDRTIGIV 125 (381)
T ss_dssp CTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT--------------------------TCCGGGCEEEEE
T ss_pred ccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc--------------------------CCccCCCEEEEE
Confidence 999999999999999999999999999999999999998852 335889999999
Q ss_pred ecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChh----hhhcchHHHHhcCCCCcE
Q 022233 176 GLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAE----THHMINKQVLSALGKEGV 251 (300)
Q Consensus 176 G~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~----t~~li~~~~l~~mk~ga~ 251 (300)
|+|+||+.+|++|++|||+|++||+..........+.++++++++||+|++|+|++++ |+++|+++.|+.||+|++
T Consensus 126 GlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gai 205 (381)
T 3oet_A 126 GVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAI 205 (381)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEE
T ss_pred eECHHHHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcE
Confidence 9999999999999999999999998643322233467999999999999999999999 999999999999999999
Q ss_pred EEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCC
Q 022233 252 VINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXX 297 (300)
Q Consensus 252 lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~ 297 (300)
|||+|||++||+++|+++|++|++.||+||||++||+++++||.++
T Consensus 206 lIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~ 251 (381)
T 3oet_A 206 LINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV 251 (381)
T ss_dssp EEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS
T ss_pred EEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC
Confidence 9999999999999999999999999999999999998776777654
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.7e-53 Score=392.78 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=218.9
Q ss_pred eEEEECCCCCCccccchhhhccc-CeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCC
Q 022233 18 RVLLFKPPPDFHLFGDECFSSNK-FKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGL 96 (300)
Q Consensus 18 ~vl~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~ 96 (300)
|||++.++ .+...+. |++. +++ . .+.++++|+++++. .+.++++++|+||+|++.|+|+
T Consensus 2 ~il~~~~~--~~~~~~~--l~~~~~~v---~----------~~~~~~~d~~i~~~---~~~~~l~~~~~Lk~I~~~~~G~ 61 (303)
T 1qp8_A 2 ELYVNFEL--PPEAEEE--LRKYFKIV---R----------GGDLGNVEAALVSR---ITAEELAKMPRLKFIQVVTAGL 61 (303)
T ss_dssp EEECCSCC--CHHHHHH--HHTTCEEE---C----------SSCCTTBCCCCBSC---CCHHHHHHCTTCCCEEBSSSCC
T ss_pred EEEEccCC--CHHHHHH--HHhcCCcc---c----------hhhhCCCEEEEECC---CCHHHHhhCCCCcEEEECCcCc
Confidence 67887665 4555544 6554 332 1 02346899988753 4679999999999999999999
Q ss_pred CCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEe
Q 022233 97 NHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVG 176 (300)
Q Consensus 97 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG 176 (300)
|+||++++ ++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|.. . . + +.++.|++|||||
T Consensus 62 d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~--~-~---~~~l~g~~vgIIG 131 (303)
T 1qp8_A 62 DHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGR---D--V-E---IPLIQGEKVAVLG 131 (303)
T ss_dssp TTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC---C--S-C---CCCCTTCEEEEES
T ss_pred ccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC---C--C-C---CCCCCCCEEEEEc
Confidence 99999985 7999999999999999999999999999999999999999999972 1 1 1 3479999999999
Q ss_pred cChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcC
Q 022233 177 LGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 177 ~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~s 256 (300)
+|+||+.+|++++++||+|++|+++.. ..+.....++++++++||+|++|+|++++|+++|+++.++.||+|+++||+|
T Consensus 132 ~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~s 210 (303)
T 1qp8_A 132 LGEIGTRVGKILAALGAQVRGFSRTPK-EGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVG 210 (303)
T ss_dssp CSTHHHHHHHHHHHTTCEEEEECSSCC-CSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCcc-ccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECC
Confidence 999999999999999999999999876 2233345689999999999999999999999999999999999999999999
Q ss_pred CCcccCHHHHHHHHHhCCceEEEeeCC-CCCCCCC-CCCCCCCCCC
Q 022233 257 RGPIIDEQELVRCLVQGEIKGAGLDVF-ENEPDVP-KELXXXXXXX 300 (300)
Q Consensus 257 rg~~vd~~aL~~aL~~~~i~~a~LDV~-~~EP~~~-~~L~~~~nv~ 300 (300)
||+++|+++|.++|++|+|+||+|||| ++||++. +|||++|||+
T Consensus 211 rg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nvi 256 (303)
T 1qp8_A 211 RAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVV 256 (303)
T ss_dssp CGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEE
T ss_pred CCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEE
Confidence 999999999999999999999999999 8899874 5899999984
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=2.2e-52 Score=412.03 Aligned_cols=270 Identities=28% Similarity=0.427 Sum_probs=236.4
Q ss_pred CCCeEEEECCCCCCccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCC
Q 022233 15 DLPRVLLFKPPPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSA 94 (300)
Q Consensus 15 ~kp~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~ 94 (300)
+|+|||++.+. .+...+. |++.+++.. .. ..+.++ +.+.++++|++++++.+++++++++++|+||||++.|+
T Consensus 3 ~~~~vl~~~~~--~~~~~~~--l~~~~~v~~-~~-~~~~~~-~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~i~~~~~ 75 (529)
T 1ygy_A 3 SLPVVLIADKL--APSTVAA--LGDQVEVRW-VD-GPDRDK-LLAAVPEADALLVRSATTVDAEVLAAAPKLKIVARAGV 75 (529)
T ss_dssp CCCEEEECSSC--CGGGGTT--SCSSSEEEE-CC-TTSHHH-HHHHGGGCSEEEECSSSCBCHHHHHTCTTCCEEEESSS
T ss_pred CCcEEEEeCCC--CHHHHHH--HhcCceEEE-cC-CCCHHH-HHHHhcCCEEEEEcCCCCCCHHHHhhCCCCcEEEECCc
Confidence 36799998876 4555555 777677654 22 223344 44456799999998778999999999999999999999
Q ss_pred CCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEE
Q 022233 95 GLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGI 174 (300)
Q Consensus 95 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgI 174 (300)
|+||||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.+ . .| . |.+|.|++|||
T Consensus 76 G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~---~-~~--~--~~~l~g~~vgI 147 (529)
T 1ygy_A 76 GLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKR---S-SF--S--GTEIFGKTVGV 147 (529)
T ss_dssp CCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCG---G-GC--C--BCCCTTCEEEE
T ss_pred CcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcc---c-Cc--C--ccccCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999972 1 12 2 77899999999
Q ss_pred EecChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCc
Q 022233 175 VGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEG 250 (300)
Q Consensus 175 iG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga 250 (300)
||+|+||+++|++|+++|++|++||++.... .+... .++++++++||+|++|+|.+++|+++++++.++.||+|+
T Consensus 148 IG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ 226 (529)
T 1ygy_A 148 VGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIEL-LSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGV 226 (529)
T ss_dssp ECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTE
T ss_pred EeeCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEE-cCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCC
Confidence 9999999999999999999999999876321 13333 389999999999999999999999999998999999999
Q ss_pred EEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCCC
Q 022233 251 VVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXXX 300 (300)
Q Consensus 251 ~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv~ 300 (300)
++||+|||+++|+++|+++|++|+++||++|||+.||...+|||++|||+
T Consensus 227 ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vi 276 (529)
T 1ygy_A 227 IIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVV 276 (529)
T ss_dssp EEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEE
T ss_pred EEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEE
Confidence 99999999999999999999999999999999999998777999999974
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=9.2e-53 Score=384.99 Aligned_cols=221 Identities=24% Similarity=0.329 Sum_probs=200.2
Q ss_pred ccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHH
Q 022233 60 HAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISA 139 (300)
Q Consensus 60 ~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~ 139 (300)
.++++|+++++ ..++ ++|+||||++.|+|+|+||+++|++++|.++| ++.++.+||||++++||++.|++..
T Consensus 31 ~~~~ad~li~~-~~~~------~~~~Lk~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~ 102 (290)
T 3gvx_A 31 DYYDAEAQVIK-DRYV------LGKRTKMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILE 102 (290)
T ss_dssp SCCCCSEEEES-SCCC------CCSSCCEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred chhhhhhhhhh-hhhh------hhhhhHHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhh
Confidence 34789999984 3333 78999999999999999999999987776666 4788999999999999999999999
Q ss_pred HHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhh
Q 022233 140 SDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAA 219 (300)
Q Consensus 140 ~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~ 219 (300)
+++.+++|.|.. . + ..+|+|+||||||+|.||+++|++|++|||+|++|+++..+........+++++++
T Consensus 103 ~~~~~~~g~w~~---~----~---~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~ 172 (290)
T 3gvx_A 103 NNELMKAGIFRQ---S----P---TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFR 172 (290)
T ss_dssp HHHHHHTTCCCC---C----C---CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHH
T ss_pred hhhHhhhccccc---C----C---ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhh
Confidence 999999999972 1 1 35799999999999999999999999999999999998765544445569999999
Q ss_pred cCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCC
Q 022233 220 NCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXX 299 (300)
Q Consensus 220 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv 299 (300)
+||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++||+ +|||++|||
T Consensus 173 ~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~--~pL~~~~nv 250 (290)
T 3gvx_A 173 QSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE--ITETNLRNA 250 (290)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS--CCSCCCSSE
T ss_pred ccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc--cchhhhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 899999998
Q ss_pred C
Q 022233 300 X 300 (300)
Q Consensus 300 ~ 300 (300)
+
T Consensus 251 i 251 (290)
T 3gvx_A 251 I 251 (290)
T ss_dssp E
T ss_pred h
Confidence 4
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-50 Score=383.09 Aligned_cols=243 Identities=23% Similarity=0.356 Sum_probs=206.3
Q ss_pred eEEEECCCCCCccccchhhhcccCeEEEecCCCCChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCCC
Q 022233 18 RVLLFKPPPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLN 97 (300)
Q Consensus 18 ~vl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~d 97 (300)
||++....+ ...+. +++.+++......+.. .+.++++|++++++.+++++++++ +|+||+|++.|+|+|
T Consensus 2 kil~~~~~~---~~~~~--~~~~~~v~~~~~~~~~-----~~~l~~ad~li~~~~~~~~~~~l~-~~~Lk~I~~~~~G~D 70 (380)
T 2o4c_A 2 RILADENIP---VVDAF--FADQGSIRRLPGRAID-----RAALAEVDVLLVRSVTEVSRAALA-GSPVRFVGTCTIGTD 70 (380)
T ss_dssp EEEEETTCT---THHHH--HGGGSEEEEECGGGCS-----TTTTTTCSEEEECTTSCBCHHHHT-TSCCCEEEECSSCST
T ss_pred EEEEecCch---HHHHH--HHhCCcEEEecCCcCC-----hHHHCCcEEEEEcCCCCCCHHHhc-CCCceEEEEcCcccc
Confidence 688876653 22333 5555565432211111 123478999999877889999999 899999999999999
Q ss_pred CCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEec
Q 022233 98 HVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGL 177 (300)
Q Consensus 98 ~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~ 177 (300)
|||+++++++||.|+|+||+++.+||||++++||++.|++ +.++.|++|||||+
T Consensus 71 ~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~--------------------------~~~l~g~tvGIIGl 124 (380)
T 2o4c_A 71 HLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR--------------------------GADLAERTYGVVGA 124 (380)
T ss_dssp TBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH--------------------------TCCGGGCEEEEECC
T ss_pred hhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh--------------------------hcccCCCEEEEEeC
Confidence 9999999999999999999999999999999999999862 22478999999999
Q ss_pred ChhHHHHHHHHHhCCCEEEEECCCCCCC-CCCcccCCHHHHhhcCCEEEEecCCChh----hhhcchHHHHhcCCCCcEE
Q 022233 178 GSIGSLVAKRLDAFGCSISYNSRTKKPS-VSYPFYSNVCELAANCDILIICCGLTAE----THHMINKQVLSALGKEGVV 252 (300)
Q Consensus 178 G~IG~~~A~~l~~~g~~V~~~~~~~~~~-~~~~~~~~l~e~l~~aDvV~l~~p~~~~----t~~li~~~~l~~mk~ga~l 252 (300)
|+||+.+|++|+++||+|++|+++.... .+. ...++++++++||+|++|+|++++ |+++++++.|+.||+|++|
T Consensus 125 G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~g~-~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gail 203 (380)
T 2o4c_A 125 GQVGGRLVEVLRGLGWKVLVCDPPRQAREPDG-EFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWL 203 (380)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECHHHHHHSTTS-CCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCChhhhccCc-ccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEE
Confidence 9999999999999999999999765322 222 356899999999999999999999 9999999999999999999
Q ss_pred EEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCCCCCCCCCC
Q 022233 253 INIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPKELXXXXXX 299 (300)
Q Consensus 253 In~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~~L~~~~nv 299 (300)
||+|||+++|+++|+++|++|+|.+|+||||++||+++++||.. ||
T Consensus 204 IN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~-nv 249 (380)
T 2o4c_A 204 VNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAAR-CL 249 (380)
T ss_dssp EECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTT-CS
T ss_pred EECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhccC-CE
Confidence 99999999999999999999999999999999999776677763 75
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.96 E-value=5.9e-32 Score=261.41 Aligned_cols=189 Identities=18% Similarity=0.201 Sum_probs=163.9
Q ss_pred CCCcceEE-EcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCcccc
Q 022233 83 MPAVRLVM-TTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSL 161 (300)
Q Consensus 83 ~p~Lk~I~-~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~ 161 (300)
+|+++.|+ .+++|+|++ +++.++||.++|+|++++ +||| +++|++....+.++.| |.+ + .
T Consensus 191 ~~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r------~--~ 251 (479)
T 1v8b_A 191 AKKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR------A--T 251 (479)
T ss_dssp HTTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH------H--H
T ss_pred hcCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh------c--c
Confidence 47899998 889999998 899999999999999999 9999 4568888888888888 861 1 1
Q ss_pred CcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhh
Q 022233 162 GIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHH 236 (300)
Q Consensus 162 ~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~ 236 (300)
+.++.|++|||||+|.||+.+|++++++|++|+++++++... .++ ...++++++++||+|++|+ .|++
T Consensus 252 --~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~-~~~~l~ell~~aDiVi~~~----~t~~ 324 (479)
T 1v8b_A 252 --DFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVVTLDEIVDKGDFFITCT----GNVD 324 (479)
T ss_dssp --CCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECC----SSSS
T ss_pred --ccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCC-EecCHHHHHhcCCEEEECC----Chhh
Confidence 567999999999999999999999999999999999986431 233 3468999999999999995 7789
Q ss_pred cchHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH--HHHhCCceEEEeeCCCCCCCCCCCCCCC--CCCC
Q 022233 237 MINKQVLSALGKEGVVINIGRGPI-IDEQELVR--CLVQGEIKGAGLDVFENEPDVPKELXXX--XXXX 300 (300)
Q Consensus 237 li~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~--aL~~~~i~~a~LDV~~~EP~~~~~L~~~--~nv~ 300 (300)
+|+++.|+.||+|++|||+|||++ ||+++|.+ +|++|+|+ +++|||+.++ .+|||.+ |||+
T Consensus 325 lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~--~~~l~~l~~~nvv 390 (479)
T 1v8b_A 325 VIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPN--GNKIIVLARGRLL 390 (479)
T ss_dssp SBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTT--SCEEEEEGGGSBH
T ss_pred hcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCC--CCeeeEecCCCEE
Confidence 999999999999999999999999 99999999 99999998 9999984322 3578877 8874
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.96 E-value=5.5e-32 Score=262.51 Aligned_cols=186 Identities=20% Similarity=0.216 Sum_probs=157.9
Q ss_pred CCcceEE-EcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccC
Q 022233 84 PAVRLVM-TTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLG 162 (300)
Q Consensus 84 p~Lk~I~-~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~ 162 (300)
|+++.|+ .+++|+|++ ++++++||.|+|+|++++ +|||+ ++|++....+.++.| |.+ ..
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g-w~~--------~~- 271 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG-IKR--------AT- 271 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH-HHH--------HH-
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh-hhh--------cc-
Confidence 8999998 889999998 889999999999999999 99994 347776666666666 751 11
Q ss_pred cccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhc
Q 022233 163 IGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHM 237 (300)
Q Consensus 163 ~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~l 237 (300)
+.++.|++|||||+|.||+.+|+++++||++|+++++++... .++ ...++++++++||+|++|+ .|+++
T Consensus 272 -g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~-~~~~l~ell~~aDiVi~~~----~t~~l 345 (494)
T 3d64_A 272 -DVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGY-RVVTMEYAADKADIFVTAT----GNYHV 345 (494)
T ss_dssp -CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECS----SSSCS
T ss_pred -ccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCC-EeCCHHHHHhcCCEEEECC----Ccccc
Confidence 668999999999999999999999999999999999986432 133 2468999999999999997 67899
Q ss_pred chHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHhCCceEEEeeCCCCCCCCC-CCCCCC--CCCC
Q 022233 238 INKQVLSALGKEGVVINIGRGPI-IDEQELVRCLVQGEIKGAGLDVFENEPDVP-KELXXX--XXXX 300 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~-~~L~~~--~nv~ 300 (300)
|+++.|+.||+|++|||+|||++ ||+++| ++|++|+|+ +++|| ||+++ +|||.+ |||+
T Consensus 346 I~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv 407 (494)
T 3d64_A 346 INHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLV 407 (494)
T ss_dssp BCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBH
T ss_pred cCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEE
Confidence 99999999999999999999999 699999 999999997 55555 46654 588888 8874
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.96 E-value=1.4e-29 Score=232.00 Aligned_cols=206 Identities=17% Similarity=0.185 Sum_probs=158.6
Q ss_pred CCeEEEECCCCCCccccchhhhcc-cCeEEEecCCCCC-------hHHHHHhccCCcEEEEEe----------------C
Q 022233 16 LPRVLLFKPPPDFHLFGDECFSSN-KFKFLKAWESPLP-------LDQFLKTHAQSVEAILSS----------------G 71 (300)
Q Consensus 16 kp~vl~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~-------~~~~l~~~~~~~d~ii~~----------------~ 71 (300)
+.||++++.........+. |.+ .+++.....+... ..+.+.+.++++|+++++ .
T Consensus 5 ~m~i~v~~~~~~~~~~~~~--L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 5 GKHVVIIGGDARQLEIIRK--LSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp TCEEEEECBCHHHHHHHHH--HHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred CcEEEEECCCHHHHHHHHH--HHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccccC
Confidence 4578888765222233333 544 4665442211110 112233445789999975 2
Q ss_pred CCCCCHHHHccCCCcceEEEcCCCCCCCCh-hHHhhCCeEEEeCC------CCCchhHHHHHHHHHHHHhhchHHHHHHH
Q 022233 72 GAPVTAETLRLMPAVRLVMTTSAGLNHVDI-AECRRRGITVANAG------NVFSEDVADLAVGLLIDLLRNISASDRFV 144 (300)
Q Consensus 72 ~~~~~~e~l~~~p~Lk~I~~~~~G~d~id~-~~~~~~gI~v~n~p------~~~~~~vAE~~l~l~L~~~R~~~~~~~~~ 144 (300)
..++++++++.+|+||+|+ +|+|++|+ ++++++||.|+|+| ++++.+|||++++++|..
T Consensus 83 ~~~~~~~~l~~~~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~----------- 148 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH----------- 148 (293)
T ss_dssp CCBCCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred CccchHHHHHhCCCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh-----------
Confidence 3468999999999999997 89999998 89999999999998 889999999999998862
Q ss_pred HhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc--cCCHHHH
Q 022233 145 KQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF--YSNVCEL 217 (300)
Q Consensus 145 ~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~--~~~l~e~ 217 (300)
. +.++.|++|||||+|.||+.+|++++++|++|++++|+..+. .+... ..+++++
T Consensus 149 -----~-------------~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~ 210 (293)
T 3d4o_A 149 -----T-------------DFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQE 210 (293)
T ss_dssp -----C-------------SSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHH
T ss_pred -----c-------------CCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHH
Confidence 1 345889999999999999999999999999999999976431 12222 2578899
Q ss_pred hhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcc
Q 022233 218 AANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 218 l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 260 (300)
+++||+|++|+|. ++++++.++.||+|+++||++||+.
T Consensus 211 l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 211 LRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp TTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred hcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 9999999999996 6788899999999999999999764
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.93 E-value=3.4e-26 Score=210.03 Aligned_cols=212 Identities=13% Similarity=0.161 Sum_probs=152.9
Q ss_pred CCeEEEECCCCCCccccchhhhcc-cCeEEEecCCCCC-------hHHHHHhccCCcEEEEEe----C----------CC
Q 022233 16 LPRVLLFKPPPDFHLFGDECFSSN-KFKFLKAWESPLP-------LDQFLKTHAQSVEAILSS----G----------GA 73 (300)
Q Consensus 16 kp~vl~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~-------~~~~l~~~~~~~d~ii~~----~----------~~ 73 (300)
..||++++.........+. |.+ .+++.....++.. ..+.+.+.++++|+|+++ . ..
T Consensus 7 ~mki~v~~~~~~~~~~~~~--L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 7 GLKIAVIGGDARQLEIIRK--LTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp SCEEEEESBCHHHHHHHHH--HHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCSS
T ss_pred CCEEEEECCCHHHHHHHHH--HHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCcccccccccC
Confidence 3479998775212223333 544 4565432211111 111123445689999872 1 34
Q ss_pred C--CCHHHHccCCCcceEEEcCCCCCCCC-hhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCC
Q 022233 74 P--VTAETLRLMPAVRLVMTTSAGLNHVD-IAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRP 150 (300)
Q Consensus 74 ~--~~~e~l~~~p~Lk~I~~~~~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~ 150 (300)
+ ++++.++.+|++|+|+ +|+|++| +++|.++||.|+|+|+++ ++ ++.|+++.+ +|.|.
T Consensus 85 ~~~~~~~~l~~~~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~~~ 145 (300)
T 2rir_A 85 EVVLKQDHLDRTPAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGTIM 145 (300)
T ss_dssp CEECCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHHHH
T ss_pred CccchHHHHhhcCCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHHHH
Confidence 5 8999999999999998 8999999 999999999999999974 33 334666544 34453
Q ss_pred CcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc--cCCHHHHhhcCCE
Q 022233 151 RQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF--YSNVCELAANCDI 223 (300)
Q Consensus 151 ~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~--~~~l~e~l~~aDv 223 (300)
... . .. +.++.|++|||||+|.||+.+|++++++|++|++++|+.... .+... ..++++++++||+
T Consensus 146 ~~~-~----~~--~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDv 218 (300)
T 2rir_A 146 LAI-Q----HT--DYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDI 218 (300)
T ss_dssp HHH-H----TC--SSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSE
T ss_pred HHH-H----hc--CCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCE
Confidence 100 0 12 668999999999999999999999999999999999976431 12221 3578999999999
Q ss_pred EEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcc
Q 022233 224 LIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 224 V~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 260 (300)
|++|+|. ++++++.++.||+|+++||++||+.
T Consensus 219 Vi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 219 CINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp EEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred EEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 9999996 6788899999999999999999864
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.83 E-value=2.9e-22 Score=194.81 Aligned_cols=177 Identities=21% Similarity=0.249 Sum_probs=142.6
Q ss_pred CCcceE-EEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccC
Q 022233 84 PAVRLV-MTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLG 162 (300)
Q Consensus 84 p~Lk~I-~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~ 162 (300)
++++-+ ..+|+|+|++ .++.++||.++|++++++ +|||+ .+|++....+....+ |.+ . .
T Consensus 209 ~~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g-~~r---~-----~- 268 (494)
T 3ce6_A 209 ESVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG-INR---G-----T- 268 (494)
T ss_dssp HHCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH-HHH---H-----H-
T ss_pred cCeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH-HHh---c-----c-
Confidence 455544 4789999998 788899999999999998 99994 346665554444444 431 0 0
Q ss_pred cccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhc
Q 022233 163 IGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHM 237 (300)
Q Consensus 163 ~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~l 237 (300)
+..+.|++|+|+|+|.||+.+|++++++|++|+++++++... .++. ..+++++++++|+|+.|++ +.++
T Consensus 269 -~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l~e~l~~aDvVi~atg----t~~~ 342 (494)
T 3ce6_A 269 -DALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTVEEAIGDADIVVTATG----NKDI 342 (494)
T ss_dssp -CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECSS----SSCS
T ss_pred -CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecHHHHHhCCCEEEECCC----CHHH
Confidence 335889999999999999999999999999999999876432 2443 4578899999999999975 4567
Q ss_pred chHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH-HHHhCCceEEEeeCCCCCC
Q 022233 238 INKQVLSALGKEGVVINIGRGPI-IDEQELVR-CLVQGEIKGAGLDVFENEP 287 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~-aL~~~~i~~a~LDV~~~EP 287 (300)
++++.++.||+|+++||++|+.. +|+.+|.. +|++++|. +++|+|+.+|
T Consensus 343 i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~ 393 (494)
T 3ce6_A 343 IMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGD 393 (494)
T ss_dssp BCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTT
T ss_pred HHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCC
Confidence 88899999999999999999999 99999998 88888887 6689987644
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.82 E-value=5.6e-21 Score=180.75 Aligned_cols=199 Identities=13% Similarity=0.131 Sum_probs=150.6
Q ss_pred CCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCCCCCChhHHhhCCeEEE----------eCCCCCchhHHHHHHHHHH
Q 022233 62 QSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVA----------NAGNVFSEDVADLAVGLLI 131 (300)
Q Consensus 62 ~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~----------n~p~~~~~~vAE~~l~l~L 131 (300)
+++|+|+. ...++++|+....|+..++.....++|..+++++.++||++. |.|.++ +.||++..+++
T Consensus 66 ~~adii~~-vk~p~~~e~~~l~~~~~l~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s--~~ae~ag~~a~ 142 (377)
T 2vhw_A 66 ADADLLLK-VKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLA--PMSEVAGRLAA 142 (377)
T ss_dssp HHCSEEEC-SSCCCGGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTH--HHHHHHHHHHH
T ss_pred ccCCEEEE-eCCCChHHHhhcCCCCEEEEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCccccC--chHHHHHHHHH
Confidence 45787754 456778888888889888888888899999999999999998 666655 56699985554
Q ss_pred HHh-hchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----
Q 022233 132 DLL-RNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----- 205 (300)
Q Consensus 132 ~~~-R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----- 205 (300)
.+. |++.. .+.|+|.. .. . ..++.|++|+|+|+|.||+.+|+.++++|++|+++|+++...
T Consensus 143 ~~a~r~l~~----~~~g~~~~---~~---~---~~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 143 QVGAYHLMR----TQGGRGVL---MG---G---VPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDA 209 (377)
T ss_dssp HHHHHHTSG----GGTSCCCC---TT---C---BTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHH----hcCCCccc---cc---C---CCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 444 66632 23454431 10 1 236899999999999999999999999999999999876431
Q ss_pred -CCCc------ccCCHHHHhhcCCEEEEec--CCChhhhhcchHHHHhcCCCCcEEEEcC--CCcccCHHHHHHHHHhCC
Q 022233 206 -VSYP------FYSNVCELAANCDILIICC--GLTAETHHMINKQVLSALGKEGVVINIG--RGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 206 -~~~~------~~~~l~e~l~~aDvV~l~~--p~~~~t~~li~~~~l~~mk~ga~lIn~s--rg~~vd~~aL~~aL~~~~ 274 (300)
.+.. ...+++++++++|+|+.++ |.+ .+.++++++.++.||+|+++||+| +|+
T Consensus 210 ~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg--------------- 273 (377)
T 2vhw_A 210 EFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG--------------- 273 (377)
T ss_dssp HTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC---------------
T ss_pred hcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCcceecHHHHhcCCCCcEEEEEecCCCC---------------
Confidence 1221 1235778899999999977 544 678899999999999999999999 432
Q ss_pred ceEEEeeCCCC-CCCC-CCCCCCCCCC
Q 022233 275 IKGAGLDVFEN-EPDV-PKELXXXXXX 299 (300)
Q Consensus 275 i~~a~LDV~~~-EP~~-~~~L~~~~nv 299 (300)
||+. ||.+ +.|+|.++||
T Consensus 274 -------v~e~~ep~~~~~~~~~~~~v 293 (377)
T 2vhw_A 274 -------CFEGSRPTTYDHPTFAVHDT 293 (377)
T ss_dssp -------SBTTCCCBCSSSCEEEETTE
T ss_pred -------ccccccCCCCCCCEEEECCE
Confidence 7888 8865 3478888876
No 42
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.76 E-value=2e-18 Score=164.43 Aligned_cols=188 Identities=17% Similarity=0.258 Sum_probs=133.6
Q ss_pred cEEEEEeCCCCCCHHHHccC-CCcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHH---HHHhhchHH
Q 022233 64 VEAILSSGGAPVTAETLRLM-PAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLL---IDLLRNISA 139 (300)
Q Consensus 64 ~d~ii~~~~~~~~~e~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~---L~~~R~~~~ 139 (300)
+|+|+.. ..+ +++.++.+ |++++|+..+.|+|++|++++.++||+|.+. +.|+|++.++. ++..+.+..
T Consensus 73 adiil~v-k~p-~~~~i~~l~~~~~li~~~~~~~d~~~~~al~~~gI~v~~~-----e~v~~~~~a~~l~~l~~~a~~ag 145 (401)
T 1x13_A 73 SEIILKV-NAP-LDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAM-----DSVPRISRAQSLDALSSMANIAG 145 (401)
T ss_dssp SSEEECS-SCC-CHHHHTTCCTTCEEEECCCGGGCHHHHHHHHHTTCEEEEG-----GGCCCSGGGGGGCHHHHHHHHHH
T ss_pred CCeEEEe-CCC-CHHHHHHhcCCCcEEEEecCCCCHHHHHHHHHCCCEEEEe-----ehhhhhhhhcccchHHHHHHHHH
Confidence 8887753 333 56778887 7999999999999999999999999999753 45555555553 333333332
Q ss_pred HHHHHHhCCCC-CcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccC-
Q 022233 140 SDRFVKQWLRP-RQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYS- 212 (300)
Q Consensus 140 ~~~~~~~g~w~-~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~- 212 (300)
+..++.+.|. .....+.. .. .| ++.|++|+|+|+|.||..+++.++.+|++|+++|+++... .+.....
T Consensus 146 -~~av~~~~~~~~~~~~~~~-~~-~g-~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~ 221 (401)
T 1x13_A 146 -YRAIVEAAHEFGRFFTGQI-TA-AG-KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLEL 221 (401)
T ss_dssp -HHHHHHHHHHCSSCSSCEE-ET-TE-EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC
T ss_pred -HHHHHHHHHhcccccCCce-ee-cc-CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEe
Confidence 2333333321 00000000 01 02 5889999999999999999999999999999999886531 1222111
Q ss_pred --------------------------CHHHHhhcCCEEEEe--cCCChhhhhcchHHHHhcCCCCcEEEEcC--CCcccC
Q 022233 213 --------------------------NVCELAANCDILIIC--CGLTAETHHMINKQVLSALGKEGVVINIG--RGPIID 262 (300)
Q Consensus 213 --------------------------~l~e~l~~aDvV~l~--~p~~~~t~~li~~~~l~~mk~ga~lIn~s--rg~~vd 262 (300)
++.+++.++|+|+.+ +|.. .+..+++++.++.||+|+++||+| ||+.++
T Consensus 222 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~ 300 (401)
T 1x13_A 222 DFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCE 300 (401)
T ss_dssp --------CCHHHHHHSHHHHHHHHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred cccccccccccchhhccHHHHHHHHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcC
Confidence 367888999999999 5532 356788999999999999999999 998887
Q ss_pred H
Q 022233 263 E 263 (300)
Q Consensus 263 ~ 263 (300)
+
T Consensus 301 ~ 301 (401)
T 1x13_A 301 Y 301 (401)
T ss_dssp T
T ss_pred c
Confidence 6
No 43
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.71 E-value=1.5e-17 Score=158.46 Aligned_cols=179 Identities=18% Similarity=0.240 Sum_probs=126.1
Q ss_pred CcEEEEEeCCCCCCHHHHccC----CCcceE-EEcCCCCCCCC-hhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhc
Q 022233 63 SVEAILSSGGAPVTAETLRLM----PAVRLV-MTTSAGLNHVD-IAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRN 136 (300)
Q Consensus 63 ~~d~ii~~~~~~~~~e~l~~~----p~Lk~I-~~~~~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~ 136 (300)
..+.|+=.+. .++.-+-... ++++-+ =-+++|+..+. +.+..+.+|+|.|++.....+..|...+..-++...
T Consensus 122 ~p~~ilDdGg-dl~~~~h~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldg 200 (436)
T 3h9u_A 122 YPNMLLDDGG-DLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDG 200 (436)
T ss_dssp CCSEEEESSS-HHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHH
T ss_pred CCceEecccc-HHHHHHHHHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHH
Confidence 4566663332 2333233333 344433 34577776552 445567899999998766555444444332222222
Q ss_pred hHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCccc
Q 022233 137 ISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFY 211 (300)
Q Consensus 137 ~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~ 211 (300)
+ .+. . +.++.|++|||+|+|.||+.+|++|+++|++|+++++++... .+. ..
T Consensus 201 i------~ra--------------t--g~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~-~~ 257 (436)
T 3h9u_A 201 I------KRA--------------T--DVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGY-QV 257 (436)
T ss_dssp H------HHH--------------H--CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EE
T ss_pred H------HHh--------------c--CCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCC-ee
Confidence 1 111 1 456899999999999999999999999999999999976431 232 24
Q ss_pred CCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHH
Q 022233 212 SNVCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPI-IDEQELVRC 269 (300)
Q Consensus 212 ~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~a 269 (300)
.+++|++++||+|+++ ..+.++|+++.|+.||+|++|||+|||.+ ||.++|.+.
T Consensus 258 ~sL~eal~~ADVVilt----~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 258 LLVEDVVEEAHIFVTT----TGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp CCHHHHTTTCSEEEEC----SSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred cCHHHHHhhCCEEEEC----CCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 5899999999999973 46788999999999999999999999997 999999874
No 44
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.69 E-value=7e-17 Score=152.93 Aligned_cols=195 Identities=14% Similarity=0.160 Sum_probs=133.6
Q ss_pred ccCCcEEEEEeCCCCC----CHHHHccCC-CcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHh
Q 022233 60 HAQSVEAILSSGGAPV----TAETLRLMP-AVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLL 134 (300)
Q Consensus 60 ~~~~~d~ii~~~~~~~----~~e~l~~~p-~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~ 134 (300)
.++++|+|+.. ..++ +++.++.++ ++++|+....+.|+.+++++.++||.++|. +...+.+++..+. +|+..
T Consensus 64 ~~~~adiil~v-~~p~~~~~~~~~i~~l~~~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~ 140 (384)
T 1l7d_A 64 ALSQADVVWKV-QRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQ 140 (384)
T ss_dssp HHSSCSEEEEE-ECCCCGGGSCCGGGGSCTTCEEEEECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHH
T ss_pred hhcCCCEEEEe-cCcccccCCHHHHHhhccCCEEEEEecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHH
Confidence 34679988864 4465 788889886 699999999999999999999999999985 2222222222232 23333
Q ss_pred hchHHHHHHHHhCCCCCcccCCCccccCcc-cccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCC
Q 022233 135 RNISASDRFVKQWLRPRQAAEGDCYSLGIG-SKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSY 208 (300)
Q Consensus 135 R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g-~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~ 208 (300)
+.+ ..+..+..+.|.-....+.+ + .+ .++.|++|+|+|+|.||..+++.++.+|++|+++|+++... .+.
T Consensus 141 a~~-ag~~av~~~~~~~~~~~~~~--~-~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga 216 (384)
T 1l7d_A 141 SNL-AGYRAVIDGAYEFARAFPMM--M-TAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG 216 (384)
T ss_dssp HHH-HHHHHHHHHHHHCSSCSSCE--E-ETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC
T ss_pred HHH-HHHHHHHHHHHHhhhcccch--h-ccCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 332 22233333333200000001 1 02 36899999999999999999999999999999999886531 122
Q ss_pred ccc--CC---------------------------HHHHhhcCCEEEEec--CCChhhhhcchHHHHhcCCCCcEEEEcC-
Q 022233 209 PFY--SN---------------------------VCELAANCDILIICC--GLTAETHHMINKQVLSALGKEGVVINIG- 256 (300)
Q Consensus 209 ~~~--~~---------------------------l~e~l~~aDvV~l~~--p~~~~t~~li~~~~l~~mk~ga~lIn~s- 256 (300)
... .. +.++++++|+|+.++ |..+ +.++++++.++.||+|+++||++
T Consensus 217 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 217 KFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp EECCC-----------------------CCHHHHHHHHHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTG
T ss_pred eEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEec
Confidence 111 01 678889999999887 4332 45678899999999999999999
Q ss_pred -CCcccC
Q 022233 257 -RGPIID 262 (300)
Q Consensus 257 -rg~~vd 262 (300)
||+.++
T Consensus 296 ~~gg~~~ 302 (384)
T 1l7d_A 296 EAGGNCP 302 (384)
T ss_dssp GGTCSST
T ss_pred CCCCCee
Confidence 886653
No 45
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.66 E-value=1.7e-16 Score=151.08 Aligned_cols=157 Identities=17% Similarity=0.201 Sum_probs=113.3
Q ss_pred CcceE-EEcCCCCCCC-ChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccC
Q 022233 85 AVRLV-MTTSAGLNHV-DIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLG 162 (300)
Q Consensus 85 ~Lk~I-~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~ 162 (300)
+++-+ =-+++|+-.+ -+.......+++.|+.+ ++..+-+-....+.+.+..... |. .
T Consensus 183 ~i~G~~EeTtTGv~rL~~m~~~g~L~~PvinVnd----s~tK~~fDn~yG~~eslvdgI~--Ra--------------t- 241 (464)
T 3n58_A 183 AIKGVTEETTTGVNRLYQLQKKGLLPFPAINVND----SVTKSKFDNKYGCKESLVDGIR--RG--------------T- 241 (464)
T ss_dssp HCCEEEECSHHHHHHHHHHHHHTCCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHHH--HH--------------H-
T ss_pred hccceeeccccchHHHHHHHHcCCCCCCEEeecc----HhhhhhhhhhhcchHHHHHHHH--Hh--------------c-
Confidence 34433 3456776654 22333456788888865 4444444444443333222211 11 1
Q ss_pred cccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhc
Q 022233 163 IGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHM 237 (300)
Q Consensus 163 ~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~l 237 (300)
+.++.|++++|+|+|.||+.+|+++++||++|+++++++... .++. ..++++++++||+|+++. .|+++
T Consensus 242 -g~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~-vv~LeElL~~ADIVv~at----gt~~l 315 (464)
T 3n58_A 242 -DVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFE-VVTLDDAASTADIVVTTT----GNKDV 315 (464)
T ss_dssp -CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECC----SSSSS
T ss_pred -CCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCce-eccHHHHHhhCCEEEECC----CCccc
Confidence 456999999999999999999999999999999998865321 2332 458999999999999864 46889
Q ss_pred chHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH
Q 022233 238 INKQVLSALGKEGVVINIGRGPI-IDEQELVR 268 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~ 268 (300)
|+++.|+.||+|++|||+|||.+ +|.++|.+
T Consensus 316 I~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 316 ITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp BCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred cCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 99999999999999999999998 99999974
No 46
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.64 E-value=2e-16 Score=149.05 Aligned_cols=204 Identities=14% Similarity=0.175 Sum_probs=127.6
Q ss_pred ccCCcEEEEEeCCCCCCHHHHccC-CCcceEEEcCCCCCCCChhHHhhCCeEEE---eCCCC-Cc----hhHHHHHH--H
Q 022233 60 HAQSVEAILSSGGAPVTAETLRLM-PAVRLVMTTSAGLNHVDIAECRRRGITVA---NAGNV-FS----EDVADLAV--G 128 (300)
Q Consensus 60 ~~~~~d~ii~~~~~~~~~e~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~---n~p~~-~~----~~vAE~~l--~ 128 (300)
.+ ++|+|+. ...++.++ ++.+ |++++|+....+.|..+++++.++||++. +.+.. .. .++++.+- +
T Consensus 63 ~~-~ad~il~-vk~p~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~a 139 (369)
T 2eez_A 63 AW-GAEMVVK-VKEPLPEE-YGFLREGLILFTYLHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMA 139 (369)
T ss_dssp HT-TSSEEEC-SSCCCGGG-GGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHH
T ss_pred ee-cCCEEEE-ECCCCHHH-HhhcCCCcEEEEEecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHH
Confidence 44 7898774 34455444 6665 78999999999999999999999999998 44432 11 34444443 3
Q ss_pred HHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC---
Q 022233 129 LLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS--- 205 (300)
Q Consensus 129 l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~--- 205 (300)
.++++ +.+..... .++.|. . . ..++.+++|+|+|.|.||+.+|+.++.+|++|+++++++...
T Consensus 140 v~~a~-~~l~~~~~--g~~~~~----~----~---~~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~ 205 (369)
T 2eez_A 140 PQVGA-QFLEKPKG--GRGVLL----G----G---VPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYL 205 (369)
T ss_dssp HHHHH-HHTSGGGT--SCCCCT----T----C---BTBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred HHHHH-HHHHHhcC--CCceec----C----C---CCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 33332 22221100 011121 0 1 236899999999999999999999999999999999875421
Q ss_pred ---CCCc------ccCCHHHHhhcCCEEEEecCCCh-hhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 206 ---VSYP------FYSNVCELAANCDILIICCGLTA-ETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 206 ---~~~~------~~~~l~e~l~~aDvV~l~~p~~~-~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.+.. ...+++++++++|+|+.+++... .+..++.++.++.||+|+++||++-. .|
T Consensus 206 ~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g-- 270 (369)
T 2eez_A 206 DDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG-- 270 (369)
T ss_dssp HHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-------------------
T ss_pred HHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC-------------CC--
Confidence 1211 12356788899999999998765 57788899999999999999999822 12
Q ss_pred eEEEeeCCCCCCCC-CCCCCCCCCC
Q 022233 276 KGAGLDVFENEPDV-PKELXXXXXX 299 (300)
Q Consensus 276 ~~a~LDV~~~EP~~-~~~L~~~~nv 299 (300)
|+ +||+ ||.+ +.|++..+||
T Consensus 271 -g~-~d~~--ep~~~~~~~~~~~~v 291 (369)
T 2eez_A 271 -GC-VETI--RPTTHAEPTYVVDGV 291 (369)
T ss_dssp -------------------CEETTE
T ss_pred -CC-CCcc--cCCCCCCCEEEECCE
Confidence 44 9998 5643 3467766665
No 47
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.60 E-value=1.5e-17 Score=158.80 Aligned_cols=126 Identities=21% Similarity=0.249 Sum_probs=98.7
Q ss_pred ccc-cCCCEEEEEecChhHHHHHHHHHh-CCCEEEEECCCCCCCCCCcccCCHHHHhhcCCE-EEEecCCChhhhhcchH
Q 022233 164 GSK-LGGKRVGIVGLGSIGSLVAKRLDA-FGCSISYNSRTKKPSVSYPFYSNVCELAANCDI-LIICCGLTAETHHMINK 240 (300)
Q Consensus 164 g~~-l~g~~vgIiG~G~IG~~~A~~l~~-~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDv-V~l~~p~~~~t~~li~~ 240 (300)
|.+ |+|+||||+|+|+||+.+|++|++ |||+|+++++....... ....+++++++.+|. .++ +|+ ++|++ |+.
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~-~~gvdl~~L~~~~d~~~~l-~~l-~~t~~-i~~ 281 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYN-PDGLNADEVLKWKNEHGSV-KDF-PGATN-ITN 281 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEE-EEEECHHHHHHHHHHHSSS-TTC-TTSEE-ECH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccC-ccCCCHHHHHHHHHhcCEe-ecC-ccCee-eCH
Confidence 556 999999999999999999999999 99999988543221100 011267777765553 223 566 56777 788
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCC--CCCCCCCCC
Q 022233 241 QVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPDVPK--ELXXXXXXX 300 (300)
Q Consensus 241 ~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~~~~--~L~~~~nv~ 300 (300)
+.|..||+ .++||++||.+||+++ +++|+.+.|.+++ +||++++ +||+++||+
T Consensus 282 ~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~ 336 (419)
T 1gtm_A 282 EELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGIL 336 (419)
T ss_dssp HHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCE
T ss_pred HHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEE
Confidence 88899988 5999999999999999 6999999999887 8998653 799999874
No 48
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.58 E-value=2.9e-15 Score=142.44 Aligned_cols=156 Identities=17% Similarity=0.302 Sum_probs=109.8
Q ss_pred CcceE-EEcCCCCCCC-ChhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccC
Q 022233 85 AVRLV-MTTSAGLNHV-DIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLG 162 (300)
Q Consensus 85 ~Lk~I-~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~ 162 (300)
+++-+ =-+++|+-.+ .+....+..++|.|+.+....+--|-..+.--++. .. +++. .
T Consensus 156 ~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~----~g---i~ra-------------t- 214 (435)
T 3gvp_A 156 KIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESIL----DG---LKRT-------------T- 214 (435)
T ss_dssp TCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHH----HH---HHHH-------------H-
T ss_pred hcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHH----HH---HHHh-------------h-
Confidence 44433 3456776554 23344457899999977555443332222111111 11 1110 0
Q ss_pred cccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC-----CCCCcccCCHHHHhhcCCEEEEecCCChhhhhc
Q 022233 163 IGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP-----SVSYPFYSNVCELAANCDILIICCGLTAETHHM 237 (300)
Q Consensus 163 ~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~-----~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~l 237 (300)
+..+.|++|+|+|+|.||+.+|++|+++|++|+++++++.. ..++ ...++++++++||+|+++ +.|.++
T Consensus 215 -~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~-~v~~Leeal~~ADIVi~a----tgt~~l 288 (435)
T 3gvp_A 215 -DMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGF-RLVKLNEVIRQVDIVITC----TGNKNV 288 (435)
T ss_dssp -CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCHHHHTTTCSEEEEC----SSCSCS
T ss_pred -CceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCC-EeccHHHHHhcCCEEEEC----CCCccc
Confidence 44689999999999999999999999999999999987532 1232 246899999999999995 457889
Q ss_pred chHHHHhcCCCCcEEEEcCCCcc-cCHHHHH
Q 022233 238 INKQVLSALGKEGVVINIGRGPI-IDEQELV 267 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~~-vd~~aL~ 267 (300)
|+++.|+.||+|+++||+|||.+ +|.++|.
T Consensus 289 I~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 289 VTREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp BCHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred CCHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 99999999999999999999998 7877764
No 49
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.55 E-value=1.5e-14 Score=132.39 Aligned_cols=110 Identities=16% Similarity=0.233 Sum_probs=93.8
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
++|||||+|.||..||++|...|++|++|||+++... +.....++.|+++.||+|++++|..+.++.++....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5899999999999999999999999999999876532 44567899999999999999999988888888888999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEee
Q 022233 245 ALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLD 281 (300)
Q Consensus 245 ~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LD 281 (300)
.+++|.++||+|...+-+.+.+.+.+++.++. .+|
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~ld 120 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVG 120 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eec
Confidence 99999999999999999999999999998874 355
No 50
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.55 E-value=5.1e-15 Score=135.73 Aligned_cols=111 Identities=13% Similarity=0.178 Sum_probs=97.1
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchH--HH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINK--QV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~--~~ 242 (300)
++||+||+|.||..||++|...|++|++|||++++. .++....++.|+++.||+|++|+|..++++.++.. .+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 589999999999999999999999999999987542 25666789999999999999999999998887743 36
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeC
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDV 282 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV 282 (300)
++.+++|.++||+|+..+-+...+.+.+++..+. .+|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEec
Confidence 7889999999999999999999999999998874 4663
No 51
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.46 E-value=6e-14 Score=128.70 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=94.7
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcch
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~ 239 (300)
.++..++|||||+|.||+.+|++|...|++|++|||+++.. .+.....++++++++||+|++++|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 35667899999999999999999999999999999986532 1444567899999999999999998877887775
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 240 KQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 240 ~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
++.+..+++|.++||++++.+.+.+++.+.+++..+.
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~ 121 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH 121 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 3234567899999999999999999999999887764
No 52
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.45 E-value=1e-13 Score=127.91 Aligned_cols=112 Identities=16% Similarity=0.182 Sum_probs=95.2
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchH
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINK 240 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~ 240 (300)
....++|||||+|.||+.+|+.|...|++|.+|||+++.. .+.....++++++++||+|++++|....++.++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 3567899999999999999999999999999999986531 24555679999999999999999987777776643
Q ss_pred -HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceE
Q 022233 241 -QVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKG 277 (300)
Q Consensus 241 -~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~ 277 (300)
..++.+++|.++||++++.+.+.+.+.+.+++..+..
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~ 145 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAH 145 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEE
Confidence 5677899999999999999999999999999877653
No 53
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.45 E-value=1.3e-13 Score=126.69 Aligned_cols=112 Identities=14% Similarity=0.154 Sum_probs=94.9
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcc-
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMI- 238 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li- 238 (300)
.....++|||||+|.||..+|+.|...|++|.+|||+++.. .+.....++++++++||+|++++|....++.++
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 96 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVF 96 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHh
Confidence 34566899999999999999999999999999999987643 244556789999999999999999877777666
Q ss_pred -hHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 239 -NKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 239 -~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
..++++.+++|.++||+++..+...+.+.+.+.+..+.
T Consensus 97 ~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 135 (310)
T 3doj_A 97 DKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR 135 (310)
T ss_dssp STTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 24567789999999999999999999999999887664
No 54
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.44 E-value=1.9e-13 Score=124.78 Aligned_cols=107 Identities=18% Similarity=0.228 Sum_probs=93.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
.++|||||+|.||..+|+.|...|++|.+||++++... +.....+++++++ ||+|++++|..+.++.++ +++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 46899999999999999999999999999999876532 4455678999999 999999999877877777 6788
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceE
Q 022233 244 SALGKEGVVINIGRGPIIDEQELVRCLVQGEIKG 277 (300)
Q Consensus 244 ~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~ 277 (300)
+.+++|.++||+++..+...+.+.+.+.+..+..
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~ 126 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIHI 126 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEE
Confidence 8899999999999999999999999998876643
No 55
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=3.5e-13 Score=123.93 Aligned_cols=136 Identities=13% Similarity=0.158 Sum_probs=93.3
Q ss_pred HHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCC--CC-----CCCCcccCC
Q 022233 142 RFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTK--KP-----SVSYPFYSN 213 (300)
Q Consensus 142 ~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~--~~-----~~~~~~~~~ 213 (300)
+..+.+.|. ..+.+ +. ......++|||||+|.||..+|+.|...|+ +|.+||+++ .. ..+.....+
T Consensus 3 ~~~~~~~~~---~~~~~-~~--~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~ 76 (312)
T 3qsg_A 3 HHHHHSSGV---DLGTE-NL--YFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKAS 76 (312)
T ss_dssp ----------------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSC
T ss_pred ccccccccc---ccCcc-cc--cccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCC
Confidence 445677776 23333 32 223456799999999999999999999999 999999973 21 124455678
Q ss_pred HHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC--CceEEEee--CCCCCC
Q 022233 214 VCELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG--EIKGAGLD--VFENEP 287 (300)
Q Consensus 214 l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~--~i~~a~LD--V~~~EP 287 (300)
+++++++||+|++++|.....+ +-.++.+.++++.++||+++..+....++.+.+.+. .+. .+| |+.++|
T Consensus 77 ~~e~~~~aDvVi~~vp~~~~~~--~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~--~vd~pv~g~~~ 150 (312)
T 3qsg_A 77 VAEVAGECDVIFSLVTAQAALE--VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQ--YAAVAVMSAVK 150 (312)
T ss_dssp HHHHHHHCSEEEECSCTTTHHH--HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCE--EEEEEECSCST
T ss_pred HHHHHhcCCEEEEecCchhHHH--HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCe--EEeccccCCch
Confidence 9999999999999999877665 236778889999999999999999999999999876 443 344 455443
No 56
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.43 E-value=4.1e-13 Score=125.91 Aligned_cols=117 Identities=15% Similarity=0.204 Sum_probs=98.6
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcC---CEEEEecCCChhhhhcc
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANC---DILIICCGLTAETHHMI 238 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~a---DvV~l~~p~~~~t~~li 238 (300)
+.+++|||||+|.||..+|++|...|++|.+|||+++.. .+.....+++|+++.+ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 668899999999999999999999999999999986531 2445567899999999 9999999987 777776
Q ss_pred hHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCC
Q 022233 239 NKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFEN 285 (300)
Q Consensus 239 ~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~ 285 (300)
..+++.+++|.+|||++++.+.+...+.+.+.+..+......|+..
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 5778889999999999999999999999999998886555555543
No 57
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.43 E-value=2.1e-13 Score=123.61 Aligned_cols=107 Identities=21% Similarity=0.346 Sum_probs=92.9
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcch--HHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMIN--KQV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~--~~~ 242 (300)
++|||||+|.||+.+|+.|...|++|++|+|+++.. .+.....++++++++||+|++++|....++.++. +++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999987643 2445567899999999999999998777777762 566
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
.+.+++|.++||+++..+.+.+.+.+.+++..+.
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR 115 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE
Confidence 7889999999999999999999999999887664
No 58
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.42 E-value=6.9e-15 Score=140.14 Aligned_cols=165 Identities=19% Similarity=0.245 Sum_probs=121.8
Q ss_pred CCcceEEEcCCCCCCCChhHHh-----hCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCc
Q 022233 84 PAVRLVMTTSAGLNHVDIAECR-----RRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDC 158 (300)
Q Consensus 84 p~Lk~I~~~~~G~d~id~~~~~-----~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~ 158 (300)
+.++.|...++|+|++++.++. ++++.++|.+|. ..+++++.+.+++.+.|++...... ..+.|.... ...
T Consensus 80 ~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~-~~~~~s~a~--~av 155 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRI-SEGAVSIGS--AAV 155 (404)
T ss_dssp HHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSST-TCSCCSHHH--HHH
T ss_pred hHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhh-cCCCccHHH--HHH
Confidence 4688899999999999999887 889999999887 4689999999999999988665332 233443100 000
Q ss_pred cccCc--ccccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC------CCCc--ccCCHHHHhhcCCEEEEe
Q 022233 159 YSLGI--GSKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS------VSYP--FYSNVCELAANCDILIIC 227 (300)
Q Consensus 159 ~~~~~--g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~------~~~~--~~~~l~e~l~~aDvV~l~ 227 (300)
.... ..++.|++|+|||+|.||+.+++.|+.+|+ +|++++|+.... .+.. ...++.+++.++|+|+.|
T Consensus 156 -~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 156 -ELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSA 234 (404)
T ss_dssp -HHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEEC
T ss_pred -HHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEc
Confidence 0000 014789999999999999999999999999 999999986432 1222 134678889999999999
Q ss_pred cCCChhhhhcchHHHHhc--C----CCCcEEEEcC
Q 022233 228 CGLTAETHHMINKQVLSA--L----GKEGVVINIG 256 (300)
Q Consensus 228 ~p~~~~t~~li~~~~l~~--m----k~ga~lIn~s 256 (300)
+|.+ ..+++.+.++. | +++.++||++
T Consensus 235 t~~~---~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 235 TAAP---HPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp CSSS---SCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred cCCC---CceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 8744 45667777776 4 3567788877
No 59
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.40 E-value=2.3e-13 Score=123.39 Aligned_cols=107 Identities=20% Similarity=0.219 Sum_probs=91.7
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcccCCHHHHhhcCCEEEEecCCChhhhhcch--HHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPFYSNVCELAANCDILIICCGLTAETHHMIN--KQV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~--~~~ 242 (300)
++|||||+|.||..+|+.|...|++|++|||+++... +.....++++++++||+|++++|..+.++.++. +.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4899999999999999999999999999999876432 444567899999999999999998777776662 456
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
++.+++|.++||++++.+...+.+.+.+.+..+.
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR 115 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 6789999999999999999999999999887664
No 60
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.36 E-value=2.8e-13 Score=123.89 Aligned_cols=108 Identities=22% Similarity=0.170 Sum_probs=91.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc-cCCHHHHhhcCCEEEEecCCChhhhhcch--H
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF-YSNVCELAANCDILIICCGLTAETHHMIN--K 240 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~-~~~l~e~l~~aDvV~l~~p~~~~t~~li~--~ 240 (300)
.++|||||+|.||..+|+.|...|++|.+|||+++.. .+... ..+++|++++||+|++++|....++.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 5789999999999999999999999999999986532 23444 57889999999999999998777776653 4
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 241 QVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 241 ~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
++++.+++|.++||+++..+...+.+.+.+.+..+.
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe
Confidence 566789999999999999999999999999887664
No 61
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.33 E-value=1.3e-12 Score=118.99 Aligned_cols=107 Identities=11% Similarity=0.168 Sum_probs=91.2
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchH--HH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINK--QV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~--~~ 242 (300)
++|||||+|.||..+|+.|...|++|++|+++++.. .+.....++++++++||+|++++|....++.++.. ++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999986532 24455678999999999999999987777766642 56
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
++.++++.++||++++.+...+.+.+.+.+..+.
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~ 117 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA 117 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 7789999999999999999999999999876553
No 62
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.32 E-value=3.6e-12 Score=117.47 Aligned_cols=115 Identities=12% Similarity=0.076 Sum_probs=93.2
Q ss_pred CCEEEEEecChhHHHHHHHHHhCC-CEEEEECCCCCCC------------CCCcccC-CHHHHhhcCCEEEEecCCChhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFG-CSISYNSRTKKPS------------VSYPFYS-NVCELAANCDILIICCGLTAET 234 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g-~~V~~~~~~~~~~------------~~~~~~~-~l~e~l~~aDvV~l~~p~~~~t 234 (300)
.++|||||+|.||..+|+.|...| ++|++||+++... .+. .. ++++++++||+|++++|.....
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~ 101 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATK 101 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHH
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHH
Confidence 478999999999999999999999 9999999986210 122 45 7889999999999999987766
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 022233 235 HHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEP 287 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP 287 (300)
+.+ .++.+.+++|.++||+++..+...+.+.+.+++..+....--|+.++|
T Consensus 102 ~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~ 152 (317)
T 4ezb_A 102 AVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVP 152 (317)
T ss_dssp HHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCST
T ss_pred HHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCch
Confidence 643 678888999999999999999999999999988766433223555433
No 63
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.30 E-value=6.4e-12 Score=122.02 Aligned_cols=115 Identities=16% Similarity=0.181 Sum_probs=95.9
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC--------CC--cccCCHHHHhh---cCCEEEEecCCChhhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV--------SY--PFYSNVCELAA---NCDILIICCGLTAETH 235 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------~~--~~~~~l~e~l~---~aDvV~l~~p~~~~t~ 235 (300)
.++|||||+|.||..+|++|...|++|.+|||+++... +. ....+++|+++ ++|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 46899999999999999999999999999999875311 11 12468999887 4999999999988888
Q ss_pred hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 236 HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
.++ .++.+.|++|.++||++++...+...+.+.+.+..+.....-|..
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 877 578889999999999999999999999999998887654444443
No 64
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.29 E-value=2.9e-12 Score=114.80 Aligned_cols=174 Identities=17% Similarity=0.166 Sum_probs=120.3
Q ss_pred ChHHHHHhccCCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHHHH
Q 022233 52 PLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLI 131 (300)
Q Consensus 52 ~~~~~l~~~~~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L 131 (300)
++.+.+......++++.+ +.|+.++++..++++.-++....|+|.++. +.|- ..+++++. .+++.
T Consensus 42 ~l~~~i~~l~~~~~G~~v--t~P~k~~i~~~~~~l~~~a~~~gavn~i~~----~~g~----~~g~ntd~-----~g~~~ 106 (263)
T 2d5c_A 42 ALPGRLKEVRRAFRGVNL--TLPLKEAALAHLDWVSPEAQRIGAVNTVLQ----VEGR----LFGFNTDA-----PGFLE 106 (263)
T ss_dssp GHHHHHHHHHHHCSEEEE--CTTCTTGGGGGCSEECHHHHHHTCCCEEEE----ETTE----EEEECCHH-----HHHHH
T ss_pred HHHHHHHhccccCceEEE--cccCHHHHHHHHHHHhHHHHHhCCCCcEEc----cCCe----EEEeCCCH-----HHHHH
Confidence 344544432212344444 357888999999999999999999999975 3442 22344432 24333
Q ss_pred HHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----
Q 022233 132 DLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----- 206 (300)
Q Consensus 132 ~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----- 206 (300)
++.|. +.++.| +++|||+|.||+++|+.|...|++|.+++|+.+...
T Consensus 107 ~l~~~---------------------------~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~ 158 (263)
T 2d5c_A 107 ALKAG---------------------------GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEE 158 (263)
T ss_dssp HHHHT---------------------------TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred HHHHh---------------------------CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 33210 224778 999999999999999999999999999999864311
Q ss_pred -CCcccCCHHHHhhcCCEEEEecCCCh--hhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 207 -SYPFYSNVCELAANCDILIICCGLTA--ETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 207 -~~~~~~~l~e~l~~aDvV~l~~p~~~--~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
+.. ..+++++ +++|+|++++|... .+...+. .+.+++|.+++|++.+. .+. .|.+++++..+
T Consensus 159 ~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p-~~t-~l~~~a~~~g~ 223 (263)
T 2d5c_A 159 FGLR-AVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRP-LWT-RFLREAKAKGL 223 (263)
T ss_dssp HTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCSS-SSC-HHHHHHHHTTC
T ss_pred hccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecCC-ccc-HHHHHHHHCcC
Confidence 222 4577888 99999999999773 3334443 46789999999999984 444 47787777655
No 65
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.26 E-value=4e-12 Score=112.85 Aligned_cols=90 Identities=14% Similarity=0.318 Sum_probs=67.7
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC--------------C------CCCcccCCHHHHhhcCCE
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP--------------S------VSYPFYSNVCELAANCDI 223 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~--------------~------~~~~~~~~l~e~l~~aDv 223 (300)
..++.+++|||||+|.||+++|+.|...|++|++|+|+++. . .+.....++.|++++||+
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDv 93 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAEL 93 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSE
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCE
Confidence 56799999999999999999999999999999999998653 0 122334678899999999
Q ss_pred EEEecCCChhhhhcchHHH-HhcCCCCcEEEEcC
Q 022233 224 LIICCGLTAETHHMINKQV-LSALGKEGVVINIG 256 (300)
Q Consensus 224 V~l~~p~~~~t~~li~~~~-l~~mk~ga~lIn~s 256 (300)
|++++|...... .+. +. ...+ +|.++||++
T Consensus 94 Vilavp~~~~~~-~~~-~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 94 VVNATEGASSIA-ALT-AAGAENL-AGKILVDIA 124 (245)
T ss_dssp EEECSCGGGHHH-HHH-HHCHHHH-TTSEEEECC
T ss_pred EEEccCcHHHHH-HHH-Hhhhhhc-CCCEEEECC
Confidence 999999765544 232 33 3344 799999999
No 66
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.23 E-value=1.3e-11 Score=119.87 Aligned_cols=110 Identities=19% Similarity=0.282 Sum_probs=91.6
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC---------CCcccCCHHHHhhc---CCEEEEecCCChh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV---------SYPFYSNVCELAAN---CDILIICCGLTAE 233 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~---------~~~~~~~l~e~l~~---aDvV~l~~p~~~~ 233 (300)
....++|||||+|.||+.+|++|...|++|.+|+|+++... +.....+++++++. +|+|++++|..+.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 35678999999999999999999999999999999864311 33345689999887 9999999998878
Q ss_pred hhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 234 THHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
++.++ +++.+.+++|.+|||++.|...+...+.+.+.+..+.
T Consensus 92 v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 92 TDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp HHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 88887 4677889999999999999999999999999876554
No 67
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.23 E-value=2e-11 Score=110.36 Aligned_cols=105 Identities=13% Similarity=0.189 Sum_probs=86.8
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchH--HH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINK--QV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~--~~ 242 (300)
++|+|||+|.||+.+|+.|...|++|.+|+ +++.. .+.....+++++++++|+|++++|...+++.++.. ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999998 65542 13444578999999999999999987767766542 45
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.+.+++|.++|++++|.+.+.+.+.+.+.+..+
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 115 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGA 115 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 567899999999999988888999999987544
No 68
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.22 E-value=1.7e-11 Score=111.13 Aligned_cols=106 Identities=19% Similarity=0.306 Sum_probs=88.5
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcch--HHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMIN--KQV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~--~~~ 242 (300)
++|+|||+|.||+.+|+.|...|++|.+|+++++.. .+.....+++++++++|+|++++|....++.++. +++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 589999999999999999999999999999876431 1344456899999999999999998777776663 356
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.+.+++|.++||++.|...+.+.|.+.+.+..+
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 118 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGV 118 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677899999999999998888899999887554
No 69
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.21 E-value=2.8e-11 Score=109.83 Aligned_cols=107 Identities=19% Similarity=0.226 Sum_probs=89.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcch--HH
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMIN--KQ 241 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~--~~ 241 (300)
.++|+|||+|.||+.+|+.|...|++|.+|+++++.. .+.....+++++++++|+|++++|....++.++. .+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 83 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGG 83 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcch
Confidence 3689999999999999999999999999999875421 2344456899999999999999998777777774 35
Q ss_pred HHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 242 VLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 242 ~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
+.+.+++|.++|++++|...+.+.|.+.+.+..+
T Consensus 84 l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~ 117 (301)
T 3cky_A 84 VLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGI 117 (301)
T ss_dssp HHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTC
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 6677899999999999987788899998887544
No 70
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.20 E-value=2.8e-11 Score=112.93 Aligned_cols=103 Identities=21% Similarity=0.302 Sum_probs=86.5
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhh-cCCEEEEecCCChhhhhcch
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAA-NCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~-~aDvV~l~~p~~~~t~~li~ 239 (300)
+|.||+|+|+|+|+||+.+|++|+.+|++|+++|++.... .+.. +.+.++++. .||+++-| ++.++|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~-~v~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT-AVALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCE-EeChHHhhcCccceecHh-----HHHhhcC
Confidence 6899999999999999999999999999999999764311 1222 336778888 89999853 5788999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 240 KQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 240 ~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
++.++.|| ..+++|.+++++.++++ .++|++++|.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 68999999999999888 6999999885
No 71
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.20 E-value=1.6e-10 Score=109.46 Aligned_cols=97 Identities=18% Similarity=0.294 Sum_probs=79.1
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCc-----------------c------------c
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYP-----------------F------------Y 211 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~-----------------~------------~ 211 (300)
.+.+.+|+|+|+|.||..+|+.++++|++|+++|+++... .+.. + .
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 5889999999999999999999999999999999886431 1111 0 1
Q ss_pred CCHHHHhhcCCEEEEec--CCChhhhhcchHHHHhcCCCCcEEEEcC--CCcccCH
Q 022233 212 SNVCELAANCDILIICC--GLTAETHHMINKQVLSALGKEGVVINIG--RGPIIDE 263 (300)
Q Consensus 212 ~~l~e~l~~aDvV~l~~--p~~~~t~~li~~~~l~~mk~ga~lIn~s--rg~~vd~ 263 (300)
.++.+++++||+|+.++ |.. ....+++++.++.||+|+++||+| +|+.++.
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred hHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 25788999999999875 433 356789999999999999999999 8887654
No 72
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.19 E-value=5.4e-11 Score=116.08 Aligned_cols=107 Identities=17% Similarity=0.232 Sum_probs=91.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----------CCCcccCCHHHHhhc---CCEEEEecCCChhhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----------VSYPFYSNVCELAAN---CDILIICCGLTAETH 235 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------~~~~~~~~l~e~l~~---aDvV~l~~p~~~~t~ 235 (300)
..+|||||+|.||+.+|++|...|++|.+|+|+++.. .+.....+++++++. +|+|++++|..+.++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 4589999999999999999999999999999986431 123345689998887 999999999888888
Q ss_pred hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 236 HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
.++ +++.+.+++|.+|||++.+...+...+.+.+.+..+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 887 5677889999999999999998999999999876554
No 73
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.18 E-value=3.2e-11 Score=109.18 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=84.7
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchH--HH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINK--QV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~--~~ 242 (300)
++|+|||+|.||+.+|+.|...|++|.+|+|+++.. .+.....+++++++++|+|++++|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 479999999999999999999999999999976531 23444568999999999999999988777776643 24
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
++.+++|.++|+++...+.+.+.+.+.+.+.
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~ 111 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKM 111 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999999888887777887877664
No 74
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.16 E-value=2.6e-11 Score=109.51 Aligned_cols=176 Identities=16% Similarity=0.201 Sum_probs=118.0
Q ss_pred CChHHHHHhcc-CCcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCCCCCChhHHhhCCeEEEeCCCCCchhHHHHHHHH
Q 022233 51 LPLDQFLKTHA-QSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGL 129 (300)
Q Consensus 51 ~~~~~~l~~~~-~~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~l~l 129 (300)
+++.+++.... .+++++.+. .|+.++++..+..+.-.+....++|.++. +.|-. .|+|++.. ++
T Consensus 52 ~~l~~~i~~l~~~~~~G~nvt--iP~k~~i~~~ld~l~~~A~~~gavnti~~----~~g~~----~g~nTd~~-----G~ 116 (275)
T 2hk9_A 52 EELKKAFEGFKALKVKGINVT--VPFKEEIIPLLDYVEDTAKEIGAVNTVKF----ENGKA----YGYNTDWI-----GF 116 (275)
T ss_dssp GGHHHHHHHHHHHTCCEEEEC--TTSTTTTGGGCSEECHHHHHHTCCCEEEE----ETTEE----EEECCHHH-----HH
T ss_pred HHHHHHHHHHHhCCCCEEEEC--ccCHHHHHHHHHHhhHHHHHhCCcceEEe----eCCEE----EeecCCHH-----HH
Confidence 34555554321 256677764 57778888888888888888888888864 34422 23343322 33
Q ss_pred HHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----
Q 022233 130 LIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS---- 205 (300)
Q Consensus 130 ~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~---- 205 (300)
+.++.+ . +.++.|++++|||.|.||+++|+.|...|++|.+++|+.+..
T Consensus 117 ~~~l~~----------~-----------------~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~ 169 (275)
T 2hk9_A 117 LKSLKS----------L-----------------IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLA 169 (275)
T ss_dssp HHHHHH----------H-----------------CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred HHHHHH----------h-----------------CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 333321 1 223668899999999999999999999999999999985421
Q ss_pred --CCCcccCCHHHHhhcCCEEEEecCCChh--hhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 206 --VSYPFYSNVCELAANCDILIICCGLTAE--THHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 206 --~~~~~~~~l~e~l~~aDvV~l~~p~~~~--t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.+.....+++++++++|+|++++|.... +...++ ++.+++|.+++|++. .. ..+.+..++..+
T Consensus 170 ~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~---~~-t~ll~~a~~~g~ 236 (275)
T 2hk9_A 170 QKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY---KE-TKLLKKAKEKGA 236 (275)
T ss_dssp TTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS---SC-CHHHHHHHHTTC
T ss_pred HHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC---Ch-HHHHHHHHHCcC
Confidence 1222334788899999999999997642 223443 456899999999998 33 345555555444
No 75
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.16 E-value=5.9e-11 Score=108.69 Aligned_cols=107 Identities=20% Similarity=0.320 Sum_probs=87.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchH--H
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINK--Q 241 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~--~ 241 (300)
-++|+|||+|.||+.+|+.|...|++|.+++++++.. .+.....+++++++++|+|++++|....++.++.. .
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~ 109 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSG 109 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchh
Confidence 3689999999999999999999999999999976542 13344568889999999999999977777666543 2
Q ss_pred HHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 242 VLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 242 ~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.++.++++.++||++++.....+.+.+.+....+
T Consensus 110 ~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~ 143 (316)
T 2uyy_A 110 VLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGG 143 (316)
T ss_dssp GGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 3567899999999999888888889988866544
No 76
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.16 E-value=5.7e-11 Score=109.36 Aligned_cols=105 Identities=18% Similarity=0.163 Sum_probs=82.7
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCC-----CCC--cccCCHHH-HhhcCCEEEEecCCChhhh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPS-----VSY--PFYSNVCE-LAANCDILIICCGLTAETH 235 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~-----~~~--~~~~~l~e-~l~~aDvV~l~~p~~~~t~ 235 (300)
++..++|||||+|.||+++|+.|+..|+ +|.+||++++.. .+. ....++++ ++++||+|++++|... +.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~-~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT-FR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGG-HH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHH-HH
Confidence 3445899999999999999999999999 999999986431 122 23467888 8999999999999764 34
Q ss_pred hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 236 HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
.++ +++...++++++++|++.......+++.+.+..
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~ 144 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK 144 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC
Confidence 444 567788999999999988776556677776654
No 77
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.15 E-value=1.3e-10 Score=106.09 Aligned_cols=91 Identities=22% Similarity=0.292 Sum_probs=74.2
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCC
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALG 247 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk 247 (300)
.++|+||| +|.||..+|+.|+..|++|.++++++. .++.+++++||+|++++|... +..++ +++...++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~--------~~~~~~~~~aDvVilavp~~~-~~~vl-~~l~~~l~ 90 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW--------AVAESILANADVVIVSVPINL-TLETI-ERLKPYLT 90 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG--------GGHHHHHTTCSEEEECSCGGG-HHHHH-HHHGGGCC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc--------cCHHHHhcCCCEEEEeCCHHH-HHHHH-HHHHhhcC
Confidence 46899999 999999999999999999999998653 257789999999999999655 66666 45667799
Q ss_pred CCcEEEEcCCCcccCHHHHHHH
Q 022233 248 KEGVVINIGRGPIIDEQELVRC 269 (300)
Q Consensus 248 ~ga~lIn~srg~~vd~~aL~~a 269 (300)
++++++|+++......+++.+.
T Consensus 91 ~~~iv~~~~svk~~~~~~~~~~ 112 (298)
T 2pv7_A 91 ENMLLADLTSVKREPLAKMLEV 112 (298)
T ss_dssp TTSEEEECCSCCHHHHHHHHHH
T ss_pred CCcEEEECCCCCcHHHHHHHHh
Confidence 9999999988765444555444
No 78
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.14 E-value=5.3e-11 Score=111.89 Aligned_cols=181 Identities=10% Similarity=0.119 Sum_probs=113.3
Q ss_pred cEEEEEeCCCCCCHHHHccC-CCcceEEEcCCCCCCCChhHHhhCCeEEEeC---CCCC-ch------hHHHHHHHHHHH
Q 022233 64 VEAILSSGGAPVTAETLRLM-PAVRLVMTTSAGLNHVDIAECRRRGITVANA---GNVF-SE------DVADLAVGLLID 132 (300)
Q Consensus 64 ~d~ii~~~~~~~~~e~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~---p~~~-~~------~vAE~~l~l~L~ 132 (300)
+|+|+.- .+.+.+-++.+ |+-.+|...-...|.=-++++.++||....- |... +. +.||.+=
T Consensus 85 adiIlkV--k~p~~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAG----- 157 (381)
T 3p2y_A 85 ADVVVKV--NPPTSDEISQLKPGSVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAG----- 157 (381)
T ss_dssp SSEEECS--SCCCHHHHTTSCTTCEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHH-----
T ss_pred CCEEEEe--CCCChhHHhhccCCCEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHH-----
Confidence 5666632 23455556666 4555565554444444467788999998652 3211 11 2222221
Q ss_pred HhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CC
Q 022233 133 LLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VS 207 (300)
Q Consensus 133 ~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~ 207 (300)
++-...... .-+... +.. +..-..+.+++|+|||+|.||..+|+.++++|++|+++|+++... .+
T Consensus 158 -y~Av~~aa~--~l~~~~-----~~l--~~~~~~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lG 227 (381)
T 3p2y_A 158 -YKAVLLGAS--LSTRFV-----PML--TTAAGTVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVG 227 (381)
T ss_dssp -HHHHHHHHH--HCSSCS-----SCE--ECSSCEECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTT
T ss_pred -HHHHHHHHH--Hhhhhh-----hhh--hcccCCcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC
Confidence 111111111 111111 000 101135789999999999999999999999999999999986531 12
Q ss_pred Ccc-------------------------cCCHHHHhhcCCEEEEec--CCChhhhhcchHHHHhcCCCCcEEEEcC--CC
Q 022233 208 YPF-------------------------YSNVCELAANCDILIICC--GLTAETHHMINKQVLSALGKEGVVINIG--RG 258 (300)
Q Consensus 208 ~~~-------------------------~~~l~e~l~~aDvV~l~~--p~~~~t~~li~~~~l~~mk~ga~lIn~s--rg 258 (300)
... ..++.+++++||+|+.++ |.. .+..+++++.++.||+|+++||+| +|
T Consensus 228 a~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~-~ap~Lvt~emv~~MkpGsVIVDvA~d~G 306 (381)
T 3p2y_A 228 AQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTALVPGR-PAPRLVTAAAATGMQPGSVVVDLAGETG 306 (381)
T ss_dssp CEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGT
T ss_pred CeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCCc-ccceeecHHHHhcCCCCcEEEEEeCCCC
Confidence 111 125778999999999886 432 356789999999999999999998 77
Q ss_pred cccC
Q 022233 259 PIID 262 (300)
Q Consensus 259 ~~vd 262 (300)
+.+.
T Consensus 307 G~~e 310 (381)
T 3p2y_A 307 GNCE 310 (381)
T ss_dssp CSBT
T ss_pred Cccc
Confidence 7665
No 79
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.14 E-value=5.3e-11 Score=107.23 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=84.5
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
++|+|||+|.||+.+|+.|.. |++|.+|+++++... +..... ++++++++|+|++++|....++.++ +++.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 479999999999999999999 999999999765321 222233 7788899999999999776677665 56667
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 245 ALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 245 ~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.+++|.++||++.+...+.+.+.+.+.+..+
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 109 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGV 109 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTE
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 8999999999999998888999999987544
No 80
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.13 E-value=1.1e-10 Score=113.63 Aligned_cols=112 Identities=16% Similarity=0.203 Sum_probs=91.0
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----------CCCcccCCHHHHhh---cCCEEEEecCCChhhhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----------VSYPFYSNVCELAA---NCDILIICCGLTAETHH 236 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------~~~~~~~~l~e~l~---~aDvV~l~~p~~~~t~~ 236 (300)
++|||||+|.||+.+|..|...|++|.+|+|+++.. .+.....+++++++ ++|+|++++|..+.++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 589999999999999999999999999999976421 22334568888875 89999999998877887
Q ss_pred cchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeC
Q 022233 237 MINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDV 282 (300)
Q Consensus 237 li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV 282 (300)
++ .++.+.+++|.+|||++.|...+...+.+.+.+..+.....-|
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv 127 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGV 127 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCC
Confidence 77 4677789999999999999988888898888876554333333
No 81
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.12 E-value=6.2e-11 Score=115.02 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=91.5
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC---------CCcccCCHHHHhhc---CCEEEEecCCChhhhhc
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV---------SYPFYSNVCELAAN---CDILIICCGLTAETHHM 237 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~---------~~~~~~~l~e~l~~---aDvV~l~~p~~~~t~~l 237 (300)
++|||||+|.||+.+|+.|...|++|.+|+|+++... +.....+++++++. +|+|++++|....++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5899999999999999999999999999999754310 23345689998887 99999999988788877
Q ss_pred chHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeC
Q 022233 238 INKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDV 282 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV 282 (300)
+ +++.+.+++|.+|||++.|...+...+.+.+.+..+.....-|
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv 129 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGV 129 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCC
Confidence 7 4677889999999999999988888999988776554333333
No 82
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.11 E-value=8.1e-11 Score=114.33 Aligned_cols=108 Identities=21% Similarity=0.283 Sum_probs=89.0
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CC-------CcccCCHHHHhhc---CCEEEEecCCChh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VS-------YPFYSNVCELAAN---CDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~-------~~~~~~l~e~l~~---aDvV~l~~p~~~~ 233 (300)
++|||||+|.||+.+|.+|...|++|.+|+|+++.. .+ .....+++++++. +|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 479999999999999999999999999999975421 12 2335688888874 9999999998877
Q ss_pred hhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEE
Q 022233 234 THHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGA 278 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a 278 (300)
++.++ +++.+.+++|.++||++.|...+.+.+.+.+.+..+...
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v 125 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFL 125 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEE
Confidence 77777 467778999999999999998888899999987655433
No 83
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.10 E-value=1.7e-10 Score=104.39 Aligned_cols=112 Identities=13% Similarity=0.135 Sum_probs=87.5
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----------------C--------------CcccCCHHHHhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----------------S--------------YPFYSNVCELAA 219 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----------------~--------------~~~~~~l~e~l~ 219 (300)
++|+|||+|.||+.+|+.++..|++|++||++++... + .....+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 6999999999999999999999999999999764311 0 123467888999
Q ss_pred cCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 220 NCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 220 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
+||+|+.++|.+.+....+.+++.+.+++++++++.+.+- ...++.+++... -...++..|.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~--~~~~la~~~~~~-~~~ig~h~~~ 146 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL--LPSDLVGYTGRG-DKFLALHFAN 146 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHHHHSCG-GGEEEEEECS
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC--CHHHHHhhcCCC-cceEEEccCC
Confidence 9999999999987777667778888899999999655543 456777777543 2346677665
No 84
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.08 E-value=1.6e-10 Score=104.01 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=81.4
Q ss_pred CEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCC-----CCCc--ccCCHHHHhh-cCCEEEEecCCChhhhhcch
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPS-----VSYP--FYSNVCELAA-NCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~-----~~~~--~~~~l~e~l~-~aDvV~l~~p~~~~t~~li~ 239 (300)
++|||||+|.||..+|+.|+..|+ +|++++++++.. .+.. ...+++++++ +||+|++++|.. .+..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 79 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA- 79 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHH-
Confidence 589999999999999999999998 999999875421 1222 2457888899 999999999965 445555
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 240 KQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 240 ~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
.++.+.++++.+++|++++.....+.+.+.+.++
T Consensus 80 ~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~ 113 (281)
T 2g5c_A 80 KKLSYILSEDATVTDQGSVKGKLVYDLENILGKR 113 (281)
T ss_dssp HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGG
T ss_pred HHHHhhCCCCcEEEECCCCcHHHHHHHHHhcccc
Confidence 3566779999999999998876777888888764
No 85
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.05 E-value=2e-10 Score=110.46 Aligned_cols=91 Identities=18% Similarity=0.382 Sum_probs=71.8
Q ss_pred cccCC-CEEEEEecChhHHHHHHHHHhC------CCEEEEECCCCCCC------CCCcc----cCCHHHHhhcCCEEEEe
Q 022233 165 SKLGG-KRVGIVGLGSIGSLVAKRLDAF------GCSISYNSRTKKPS------VSYPF----YSNVCELAANCDILIIC 227 (300)
Q Consensus 165 ~~l~g-~~vgIiG~G~IG~~~A~~l~~~------g~~V~~~~~~~~~~------~~~~~----~~~l~e~l~~aDvV~l~ 227 (300)
..|.| ++|||||+|+||.++|+.|+.. |++|++..+..... .++.. ..++.|++++||+|+++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILa 128 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLL 128 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEEC
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEEC
Confidence 56899 9999999999999999999988 99987655443221 23332 25799999999999999
Q ss_pred cCCChhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 228 CGLTAETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 228 ~p~~~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
+|..... .++. ++++.||+|++ |-.+.|
T Consensus 129 VP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaG 156 (525)
T 3fr7_A 129 ISDAAQA-DNYE-KIFSHMKPNSI-LGLSHG 156 (525)
T ss_dssp SCHHHHH-HHHH-HHHHHSCTTCE-EEESSS
T ss_pred CChHHHH-HHHH-HHHHhcCCCCe-EEEeCC
Confidence 9987664 4554 78999999998 466666
No 86
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.04 E-value=1.7e-10 Score=102.77 Aligned_cols=98 Identities=15% Similarity=0.205 Sum_probs=78.2
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCC--CCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRT--KKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~--~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
++|||||+|.||..+|+.|...|++|+++++. ++.. .+.. .++++++++||+|++++|.....+.+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 48999999999999999999999999998873 1111 1222 67888999999999999987666654 466
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
.+.+++ ++||++.+.+.+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 677776 99999998888888888888664
No 87
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.04 E-value=1.8e-10 Score=107.02 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=73.2
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChhhhhcc
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAETHHMI 238 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li 238 (300)
..+.+++|||||+|.||+++|+.|+..|++|.+++++.... .+.... ++++++++||+|++++|.... ..++
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~~-~~v~ 89 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEFQ-GRLY 89 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHHH-HHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHHH-HHHH
Confidence 35889999999999999999999999999999999876431 233333 888999999999999996554 5555
Q ss_pred hHHHHhcCCCCcEEEEcC
Q 022233 239 NKQVLSALGKEGVVINIG 256 (300)
Q Consensus 239 ~~~~l~~mk~ga~lIn~s 256 (300)
.+++.+.+++|+++++++
T Consensus 90 ~~~i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 90 KEEIEPNLKKGATLAFAH 107 (338)
T ss_dssp HHHTGGGCCTTCEEEESC
T ss_pred HHHHHhhCCCCCEEEEcC
Confidence 546677899999999884
No 88
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.61 E-value=2.1e-11 Score=105.22 Aligned_cols=90 Identities=19% Similarity=0.262 Sum_probs=72.3
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----SYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
+.+++|+|||+|.||+.+|+.|...|++|.+++|+..... +... .+++++++++|+|++++|.. .++.++ +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~-~~~~~~~~~aDvVilav~~~-~~~~v~--~- 91 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEV-LCYSEAASRSDVIVLAVHRE-HYDFLA--E- 91 (201)
Confidence 7788999999999999999999999999999998765211 2222 37788899999999999975 566665 2
Q ss_pred HhcCCCCcEEEEcCCCccc
Q 022233 243 LSALGKEGVVINIGRGPII 261 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~v 261 (300)
+..++++.++||+++|-..
T Consensus 92 l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 3456789999999999863
No 89
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.03 E-value=5.2e-10 Score=96.85 Aligned_cols=80 Identities=16% Similarity=0.300 Sum_probs=63.9
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
.++.+++|+|||+|.||+.+|+.|...|++|.+++|+++ .+++||+|++++| .+.++.++. ++.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-------------~~~~aD~vi~av~-~~~~~~v~~-~l~~ 79 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------ATTLGEIVIMAVP-YPALAALAK-QYAT 79 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-------------CSSCCSEEEECSC-HHHHHHHHH-HTHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-------------HhccCCEEEEcCC-cHHHHHHHH-HHHH
Confidence 358899999999999999999999999999999998754 5678999999999 666666654 4455
Q ss_pred cCCCCcEEEEcCCCcc
Q 022233 245 ALGKEGVVINIGRGPI 260 (300)
Q Consensus 245 ~mk~ga~lIn~srg~~ 260 (300)
.++ ++++|++++|-.
T Consensus 80 ~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 80 QLK-GKIVVDITNPLN 94 (209)
T ss_dssp HHT-TSEEEECCCCBC
T ss_pred hcC-CCEEEEECCCCC
Confidence 677 999999999765
No 90
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.03 E-value=5.4e-10 Score=107.93 Aligned_cols=148 Identities=16% Similarity=0.170 Sum_probs=101.3
Q ss_pred CcceE-EEcCCCCCCCC-hhHHhhCCeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccC
Q 022233 85 AVRLV-MTTSAGLNHVD-IAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLG 162 (300)
Q Consensus 85 ~Lk~I-~~~~~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~ 162 (300)
+++-+ =-+++|+..+- +....+..|+|.|+.+....+.-+-..+.- . .+..+-|. ..
T Consensus 201 ~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~----~-------sl~dgi~r---------~t- 259 (488)
T 3ond_A 201 RVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCR----H-------SLPDGLMR---------AT- 259 (488)
T ss_dssp HCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHH----H-------HHHHHHHH---------HH-
T ss_pred hcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhcccc----H-------HHHHHHHH---------Hc-
Confidence 34433 34567777652 223335679999997755444222222111 1 11111111 01
Q ss_pred cccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhc
Q 022233 163 IGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHM 237 (300)
Q Consensus 163 ~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~l 237 (300)
+.++.|++++|+|+|.||+.+|++|+++|++|+++++++... .++ ...+++++++.+|+|+.+. .+.++
T Consensus 260 -g~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~-dv~~lee~~~~aDvVi~at----G~~~v 333 (488)
T 3ond_A 260 -DVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGL-QVLTLEDVVSEADIFVTTT----GNKDI 333 (488)
T ss_dssp -CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCGGGTTTTCSEEEECS----SCSCS
T ss_pred -CCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCC-ccCCHHHHHHhcCEEEeCC----CChhh
Confidence 445899999999999999999999999999999999875321 122 3457889999999999764 34677
Q ss_pred chHHHHhcCCCCcEEEEcCCCc
Q 022233 238 INKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~ 259 (300)
++.+.++.||++++++|++++.
T Consensus 334 l~~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 334 IMLDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp BCHHHHTTSCTTEEEEESSSTT
T ss_pred hhHHHHHhcCCCeEEEEcCCCC
Confidence 8888999999999999999983
No 91
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.98 E-value=2.8e-10 Score=110.21 Aligned_cols=119 Identities=13% Similarity=0.185 Sum_probs=88.0
Q ss_pred CEEEEEecChhHHHHHHHHHhC--CCEEEEECCCCCCCC------------------------CCcccCCHHHHhhcCCE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF--GCSISYNSRTKKPSV------------------------SYPFYSNVCELAANCDI 223 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~--g~~V~~~~~~~~~~~------------------------~~~~~~~l~e~l~~aDv 223 (300)
++|+|||+|.||..+|..|... |++|++||++++... +.....++++++++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999988 899999998753210 11223577888999999
Q ss_pred EEEecCCChhhhhc-------------chHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEee---CCCCCC
Q 022233 224 LIICCGLTAETHHM-------------INKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLD---VFENEP 287 (300)
Q Consensus 224 V~l~~p~~~~t~~l-------------i~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LD---V~~~EP 287 (300)
|++|+|......+. ..+.+.+.+++|.++||+|+..+-..+.+.+.+++.... .+| ++.+|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeCHHH
Confidence 99999865433221 123466778999999999999988888899999876421 233 356666
Q ss_pred CCC
Q 022233 288 DVP 290 (300)
Q Consensus 288 ~~~ 290 (300)
..+
T Consensus 164 ~~~ 166 (467)
T 2q3e_A 164 LAE 166 (467)
T ss_dssp CCT
T ss_pred hhc
Confidence 543
No 92
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.98 E-value=2.1e-10 Score=102.36 Aligned_cols=98 Identities=14% Similarity=0.283 Sum_probs=76.8
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCE-EEEECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChhhhh
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCS-ISYNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAETHH 236 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~-V~~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~ 236 (300)
..++.+++|||||+|.||+.+|+.|...|++ |.+++++++.. .+.....+++++++++|+|++++|... .+.
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~-~~~ 83 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA-FAE 83 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH-HHH
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH-HHH
Confidence 3456678999999999999999999988998 88999876432 133445688888999999999999663 355
Q ss_pred cchHHHHhcCCCCcEEEEcCCCcccCH
Q 022233 237 MINKQVLSALGKEGVVINIGRGPIIDE 263 (300)
Q Consensus 237 li~~~~l~~mk~ga~lIn~srg~~vd~ 263 (300)
++ +++.+.++++.++|+++.|...+.
T Consensus 84 v~-~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 84 LL-QGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp HH-HHHHTTCCTTCEEEECCTTSCGGG
T ss_pred HH-HHHHhhcCCCcEEEECCCCCchHH
Confidence 54 456677889999999999987644
No 93
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.96 E-value=5.2e-10 Score=101.08 Aligned_cols=102 Identities=19% Similarity=0.201 Sum_probs=80.0
Q ss_pred CCEEEEEecChhHHHHHHHHHhC--CCEEEEECCCCCCC-----CCC--cccCCHHHHhhcCCEEEEecCCChhhhhcch
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAF--GCSISYNSRTKKPS-----VSY--PFYSNVCELAANCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~--g~~V~~~~~~~~~~-----~~~--~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~ 239 (300)
-++|||||+|.||+.+|+.|... |++|.+++++++.. .+. ....++++++++||+|++++|.... +.++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~-~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKT-IDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHH-HHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHH-HHHH-
Confidence 36899999999999999999876 68999999875421 122 2345778889999999999996544 5555
Q ss_pred HHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 240 KQVLSA-LGKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 240 ~~~l~~-mk~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
.++.+. ++++.+++|++++.....+.+.+.+.+
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~ 117 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKD 117 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccc
Confidence 456677 899999999998877667888888765
No 94
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=98.95 E-value=3.2e-10 Score=105.52 Aligned_cols=99 Identities=12% Similarity=0.163 Sum_probs=73.8
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhc----CCEEEEecCCChhhhhcch
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAAN----CDILIICCGLTAETHHMIN 239 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~----aDvV~l~~p~~~~t~~li~ 239 (300)
-++|||||+|.||.++|+.|+..|++|++||+++... .+.....++++++++ ||+|++++|. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 4589999999999999999999999999999986432 244445678887764 7999999995 4566666
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 022233 240 KQVLSALGKEGVVINIGRGPIIDEQELVRCL 270 (300)
Q Consensus 240 ~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL 270 (300)
+++.. ++++++++|++.....-.+++.+.+
T Consensus 86 ~~l~~-~~~~~iv~Dv~Svk~~i~~~~~~~~ 115 (341)
T 3ktd_A 86 DAVHT-HAPNNGFTDVVSVKTAVYDAVKARN 115 (341)
T ss_dssp HHHHH-HCTTCCEEECCSCSHHHHHHHHHTT
T ss_pred HHHHc-cCCCCEEEEcCCCChHHHHHHHHhC
Confidence 34433 5899999999876643334444433
No 95
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.94 E-value=2.1e-09 Score=103.52 Aligned_cols=154 Identities=13% Similarity=0.098 Sum_probs=102.7
Q ss_pred CCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCE
Q 022233 115 GNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCS 194 (300)
Q Consensus 115 p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~ 194 (300)
.|.|-..|.|.+.+++|...|. .++|......+.+ .. ...-.=++|+|||+|.||..||..++..|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~a~~~---------~~~w~~p~~~~~~-~~--~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~ 79 (460)
T 3k6j_A 12 TGENLYFQGSEVRSYLMEAHSL---------AGQWSLPNDRGDH-TN--SEAYDVNSVAIIGGGTMGKAMAICFGLAGIE 79 (460)
T ss_dssp TSGGGGGCBCHHHHHHHHTTCC---------TTSCBCSTTSCBT-TS--CCCCCCCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred cccchhhhhHHHHHHHHhHHHh---------hccccCCCCcccc-cc--CCcccCCEEEEECCCHHHHHHHHHHHHCCCe
Confidence 4556667778888887773332 4567632111112 10 1111236899999999999999999999999
Q ss_pred EEEECCCCCCC-------------CCC-------------cccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCC
Q 022233 195 ISYNSRTKKPS-------------VSY-------------PFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGK 248 (300)
Q Consensus 195 V~~~~~~~~~~-------------~~~-------------~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ 248 (300)
|++||++++.. .+. ....+++ .+++||+|+.++|.+.+.+.-+-+++.+.+++
T Consensus 80 V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~ 158 (460)
T 3k6j_A 80 TFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKS 158 (460)
T ss_dssp EEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCT
T ss_pred EEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 99999986510 011 1234664 68999999999998887766566778888999
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 249 EGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 249 ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
+++|++.+.+ +....+.+.+.. .-...++..|.
T Consensus 159 ~aIlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn 191 (460)
T 3k6j_A 159 TCIFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN 191 (460)
T ss_dssp TCEEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS
T ss_pred CCEEEecCCC--hhHHHHHHhccC-CcceEEEEecc
Confidence 9999644443 334556665543 23457788777
No 96
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.94 E-value=5.4e-10 Score=103.10 Aligned_cols=113 Identities=15% Similarity=0.079 Sum_probs=84.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----------------CC--------------CcccCCHHHHh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----------------VS--------------YPFYSNVCELA 218 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------------~~--------------~~~~~~l~e~l 218 (300)
-++|||||+|.||..+|..+...|++|++||++++.. .+ .....++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 3689999999999999999999999999999986421 01 12346889999
Q ss_pred hcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 219 ANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 219 ~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
++||+|+.++|...+.+.-+-+++.+.++++++|++.+.+ +....+.+.+... -...+..-|.
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~~-~r~ig~Hp~~ 148 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAHV-KQCIVAHPVN 148 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTTG-GGEEEEEECS
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCCC-CCeEEeecCC
Confidence 9999999999988776655556788889999999876665 3445666666432 2334555454
No 97
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.91 E-value=2.2e-09 Score=102.68 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=83.6
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----------------------CCcccCCHHHHhhc
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----------------------SYPFYSNVCELAAN 220 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----------------------~~~~~~~l~e~l~~ 220 (300)
+++..-++|+|||+|.||..+|..|+. |++|++||++++... ......++++++++
T Consensus 31 ~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~ 109 (432)
T 3pid_A 31 GRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRN 109 (432)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTT
T ss_pred ccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhC
Confidence 566777899999999999999999988 999999998764210 12234578899999
Q ss_pred CCEEEEecCCChh----------hhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 221 CDILIICCGLTAE----------THHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 221 aDvV~l~~p~~~~----------t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
||+|++++|.... .+.. .+.+.+ +++|+++|+.|+..+-..+.+.+.+.+..+
T Consensus 110 aDvViiaVPt~~~~~~~~~Dl~~V~~v-~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 110 ADYVIIATPTDYDPKTNYFNTSTVEAV-IRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp CSEEEECCCCEEETTTTEEECHHHHHH-HHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred CCEEEEeCCCccccccccccHHHHHHH-HHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 9999999997531 2222 245666 999999999999999889999998877644
No 98
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.90 E-value=7.7e-10 Score=100.86 Aligned_cols=110 Identities=14% Similarity=0.184 Sum_probs=79.5
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC------------CCcccCCHHHHhhcCCEEEEecCCChhh
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV------------SYPFYSNVCELAANCDILIICCGLTAET 234 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------------~~~~~~~l~e~l~~aDvV~l~~p~~~~t 234 (300)
-+.|+|||||+|.||..||..++ .|++|++||++++... +.....++++ +++||+|+.++|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 45789999999999999999999 9999999999864321 1222456766 89999999999999987
Q ss_pred hhcchHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 235 HHMINKQVLSALGKEGVVI-NIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lI-n~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
+..+-.+ ++.+ ++++++ |+|.-++ ..+.+++. ..-...++-.|.
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~ 132 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN 132 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC
Confidence 7666555 4556 898884 8877554 34444442 222346666666
No 99
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.89 E-value=1.7e-09 Score=97.02 Aligned_cols=99 Identities=17% Similarity=0.268 Sum_probs=76.2
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCC--cccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSY--PFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~--~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
++|+|||+|.||+.+|+.|...|++|.+++++++.. .+. ....+++++ +++|+|++++|. ..+..++ +++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH-HHH
Confidence 489999999999999999999999999999875421 122 124578888 999999999994 3455555 466
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLV 271 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 271 (300)
.+.++++.++||++.......+.+.+.+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~ 106 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS 106 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC
Confidence 67789999999998777666666655543
No 100
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.88 E-value=4.2e-09 Score=96.93 Aligned_cols=102 Identities=16% Similarity=0.243 Sum_probs=78.4
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCC----CEEEEECCCCC--CC-----CCCcccCCHHHHhhcCCEEEEecCCChhhh
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFG----CSISYNSRTKK--PS-----VSYPFYSNVCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g----~~V~~~~~~~~--~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
...++|||||+|.||..+|..|...| .+|.+|+|+++ .. .+.....+..+++++||+|++++| ...++
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 44578999999999999999999989 78999999864 21 134445678899999999999999 45666
Q ss_pred hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 236 HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
.++ .++...++++.++|+++-|-. .+.+.+.+.+
T Consensus 99 ~vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 99 FIL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HHH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HHH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 555 356667889999999987643 4556666664
No 101
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.86 E-value=6.8e-09 Score=100.03 Aligned_cols=102 Identities=14% Similarity=0.278 Sum_probs=80.6
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------------------------C-CCcccCCHHHHhhcCCEE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------------------------V-SYPFYSNVCELAANCDIL 224 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------------------------~-~~~~~~~l~e~l~~aDvV 224 (300)
++|+|||+|.||..+|..|...|++|++||++++.. . ......++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 699999999999999999999999999999875421 0 012345788899999999
Q ss_pred EEecCCCh---------hhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 225 IICCGLTA---------ETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 225 ~l~~p~~~---------~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
++++|... ..+..+ +.+.+.+++|.++|+.|.-.+-..+.+.+.+++
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999653 344443 566778999999999998776667777777765
No 102
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.86 E-value=5.6e-09 Score=84.71 Aligned_cols=103 Identities=16% Similarity=0.266 Sum_probs=81.2
Q ss_pred cCCCEEEEEec----ChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 167 LGGKRVGIVGL----GSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 167 l~g~~vgIiG~----G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
++-++|+|||+ |.||..++++|...|++|+.+++..++..+...+.+++|+.+..|++++++| .+....++. +.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~~-~~ 89 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVAK-EA 89 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHHH-HH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHHH-HH
Confidence 55779999999 9999999999999999988888876544566667899999999999999999 566676664 34
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
.+ ...++++++++. ..+++.+++++.++.
T Consensus 90 ~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 90 VE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp HH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred HH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 44 566788888754 267888888887775
No 103
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.86 E-value=1.5e-08 Score=97.39 Aligned_cols=103 Identities=17% Similarity=0.332 Sum_probs=82.4
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----C---------------------CcccCCHHHHhhcCCEE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----S---------------------YPFYSNVCELAANCDIL 224 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----~---------------------~~~~~~l~e~l~~aDvV 224 (300)
-+|+|||+|.||..+|..|...|++|++||++++... + .....++.+++++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 3899999999999999999999999999999876411 1 12346788999999999
Q ss_pred EEecCCCh----------hhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 225 IICCGLTA----------ETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 225 ~l~~p~~~----------~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
++|+|... ..+..+ +.+.+.+++|.++|+.|.-.+-..+.+.+.+++.
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 99988643 234443 5677889999999999987777778888877764
No 104
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.85 E-value=2.2e-09 Score=94.98 Aligned_cols=99 Identities=16% Similarity=0.266 Sum_probs=75.0
Q ss_pred CEEEEEecChhHHHHHHHHHhCCC----EEEEECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChhhhhcch
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGC----SISYNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~----~V~~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~ 239 (300)
++|||||+|+||+.+|+.|...|+ +|.+|+|+++.. .+.....++++++++||+|++++|. ...+.++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 589999999999999999999998 999999986532 1444567899999999999999974 3445455
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 240 KQVLSALGKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 240 ~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
+++...++++.++|.+.-|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 45666788999999776654 35566666644
No 105
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.84 E-value=2.4e-09 Score=100.33 Aligned_cols=103 Identities=19% Similarity=0.299 Sum_probs=80.5
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC------CCcccCCHHHHhh-cCCEEEEecCCChhhhhcc
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV------SYPFYSNVCELAA-NCDILIICCGLTAETHHMI 238 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------~~~~~~~l~e~l~-~aDvV~l~~p~~~~t~~li 238 (300)
+|.|++|+|+|+|+||+.+|++|..+|++|+++|++..... +.. ..+.++++. +||+++.|. +.++|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~-~v~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD-AVAPNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE-ECCGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEChHHHhccCCcEeeccc-----hHHHh
Confidence 58899999999999999999999999999999998754211 222 235566665 899998874 56678
Q ss_pred hHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 239 NKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 239 ~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
+.+.++.|+ ..++++.+++++.+++ ..+.|+++++.
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~ 279 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIV 279 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCE
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCE
Confidence 877788884 5788999999988755 55777777763
No 106
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.83 E-value=1.5e-08 Score=89.96 Aligned_cols=99 Identities=22% Similarity=0.382 Sum_probs=72.0
Q ss_pred CCEEEEEecChhHHHHHHHHHhCC----CEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFG----CSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g----~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
.++|+|||+|.||+.+|+.|...| .+|.+|+|+++. .+.....++.++++++|+|++++|. ..++.++ .++.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~-~~l~~ 80 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-TTLNYMSSNEELARHCDIIVCAVKP-DIAGSVL-NNIKP 80 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-SSSEECSCHHHHHHHCSEEEECSCT-TTHHHHH-HHSGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHHH-HHHHH
Confidence 468999999999999999999888 689999998765 4444556888999999999999994 4555554 34455
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 245 ALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 245 ~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
.++ +.++|....| ++.+.+.+.+..+
T Consensus 81 ~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 81 YLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp GCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred hcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 564 4555555444 2334666666553
No 107
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.83 E-value=2.3e-09 Score=96.78 Aligned_cols=88 Identities=10% Similarity=0.244 Sum_probs=70.8
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
++|+|||+ |.||+.+|+.|...|++|.+|+|+++.. .+.. ..++.+++++||+|++++|... ++.++ +++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-LTDGDGWIDEADVVVLALPDNI-IEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-CCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-cCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHH
Confidence 59999999 9999999999999999999999875431 1222 2367788999999999999654 55555 4666
Q ss_pred hcCCCCcEEEEcCCCcc
Q 022233 244 SALGKEGVVINIGRGPI 260 (300)
Q Consensus 244 ~~mk~ga~lIn~srg~~ 260 (300)
+.++++.++|+++.|..
T Consensus 89 ~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 89 PRVRPGTIVLILDAAAP 105 (286)
T ss_dssp GGSCTTCEEEESCSHHH
T ss_pred HhCCCCCEEEECCCCch
Confidence 77899999999998873
No 108
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.83 E-value=2e-09 Score=87.35 Aligned_cols=86 Identities=20% Similarity=0.355 Sum_probs=69.0
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC------CC--cccCCHHHHhhcCCEEEEecCCChhhhhcch
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV------SY--PFYSNVCELAANCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------~~--~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~ 239 (300)
.+++|+|||.|.||+.+++.|+..|++|.+++|+.+... +. ....+++++++++|+|++++|.. ..++.
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~ 96 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVE 96 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEee
Confidence 388999999999999999999999999999999764321 22 23568899999999999999866 23444
Q ss_pred HHHHhcCCCCcEEEEcCCCc
Q 022233 240 KQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 240 ~~~l~~mk~ga~lIn~srg~ 259 (300)
. +.+++|.+++|++...
T Consensus 97 ~---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 97 E---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp G---GGCCTTCEEEECCSSC
T ss_pred H---HHcCCCCEEEEccCCc
Confidence 3 5678999999998754
No 109
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.81 E-value=7.6e-09 Score=91.81 Aligned_cols=96 Identities=21% Similarity=0.311 Sum_probs=74.2
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
++|||||+|.||+.+++.|...|.+|.+|+++++.. .+.....+++++++++|+|++++| ..... +.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~-----~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFE-----TVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHH-----HHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHH-----HHH
Confidence 589999999999999999999999999999976431 134445689999999999999999 44333 445
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 244 SALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 244 ~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
..+++|.++|++..|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 55778999999977654 34566666544
No 110
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.80 E-value=6.7e-09 Score=94.55 Aligned_cols=112 Identities=13% Similarity=0.186 Sum_probs=79.2
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----------------C------------------CcccCCHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----------------S------------------YPFYSNVC 215 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----------------~------------------~~~~~~l~ 215 (300)
++|+|||+|.||..+|..|...|++|++||++++... + .....+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999998753210 1 11245778
Q ss_pred HHhhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 216 ELAANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 216 e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
+.+++||+|++++|...+...-+-+++.+.++++++++..+.+- ....+.+.+.... ..++...+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~~-~~~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQD-RFAGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCGG-GEEEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCcc-cEEEEecCC
Confidence 88999999999999876654444456667788999988655543 3345555553221 235556554
No 111
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.80 E-value=2.7e-09 Score=92.67 Aligned_cols=90 Identities=17% Similarity=0.231 Sum_probs=68.7
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
.+++|+|||+|.||+.+|+.|...|++|.+++|+.+.. .+... .+++++++++|+|++++|. ...+.++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQV-TFQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEE-EEHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCce-ecHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 45799999999999999999999999999999875421 12222 3788899999999999995 44555553
Q ss_pred HhcCCCCcEEEEcCCCcccC
Q 022233 243 LSALGKEGVVINIGRGPIID 262 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd 262 (300)
+..+.++.++||+++|...+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 33333799999999997654
No 112
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.79 E-value=1.1e-08 Score=98.10 Aligned_cols=102 Identities=16% Similarity=0.211 Sum_probs=79.1
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------------------------CC-CcccCCHHHHhhcCCEE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------------------------VS-YPFYSNVCELAANCDIL 224 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------------------------~~-~~~~~~l~e~l~~aDvV 224 (300)
++|+|||+|.||..+|..|...|++|+++|++++.. .+ .....++++++++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 489999999999999999999999999999875321 01 12345788889999999
Q ss_pred EEecCCChh---------hhhcchHHHHhcCCC---CcEEEEcCCCcccC-HHHHHHHHHh
Q 022233 225 IICCGLTAE---------THHMINKQVLSALGK---EGVVINIGRGPIID-EQELVRCLVQ 272 (300)
Q Consensus 225 ~l~~p~~~~---------t~~li~~~~l~~mk~---ga~lIn~srg~~vd-~~aL~~aL~~ 272 (300)
++++|.... ++..+ +++.+.+++ +.++|+.|...+-. ++.+.+.+++
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999996554 44433 455667888 99999999877666 6777777766
No 113
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.78 E-value=2.6e-08 Score=89.94 Aligned_cols=106 Identities=15% Similarity=0.170 Sum_probs=80.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC---EEEEECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChhhhhcch
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC---SISYNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~---~V~~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~ 239 (300)
.++|||||+|+||+.+|+.|...|+ +|.+|+|+++.. .+.....+..+++++||+|++++|. ...+.++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4789999999999999999999998 899999986532 2444556889999999999999984 4444444
Q ss_pred HHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHh-CCceEE
Q 022233 240 KQVLSA-LGKEGVVINIGRGPIIDEQELVRCLVQ-GEIKGA 278 (300)
Q Consensus 240 ~~~l~~-mk~ga~lIn~srg~~vd~~aL~~aL~~-~~i~~a 278 (300)
+++... ++++.++|+++-|- ..+.|.+.+.. .++.++
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGV--TTPLIEKWLGKASRIVRA 119 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTCCSSEEEE
T ss_pred HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCCCCeEEEE
Confidence 445555 78888999887664 35677777765 345443
No 114
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.76 E-value=4.2e-09 Score=96.70 Aligned_cols=105 Identities=17% Similarity=0.125 Sum_probs=77.5
Q ss_pred CCCEEEEEecChhHHHHHHHHHhC-CC-EEEEECCCCCCCC------C--CcccCCHHHHhhcCCEEEEecCCChhhhhc
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAF-GC-SISYNSRTKKPSV------S--YPFYSNVCELAANCDILIICCGLTAETHHM 237 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~-g~-~V~~~~~~~~~~~------~--~~~~~~l~e~l~~aDvV~l~~p~~~~t~~l 237 (300)
..++|||||+|.||+.+++.+... |. +|.+|+|+++... + .....+++++++++|+|++++|.. +.+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Ccc
Confidence 467999999999999999998764 87 8999999864321 2 334578999999999999999853 455
Q ss_pred chHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEee
Q 022233 238 INKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLD 281 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LD 281 (300)
+.. +.+++|.++++++...+- ...+.+.+.+... ..+|
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p~-~~el~~~~~~~g~--~~vD 248 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRPD-WRELDDELMKEAV--LYVD 248 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCSTT-CCSBCHHHHHHSE--EEES
T ss_pred cCH---HHcCCCcEEEeCCCCCCC-ceeccHHHHhcCE--EEEC
Confidence 654 578999999999877663 3444444443332 3466
No 115
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.75 E-value=8.5e-09 Score=84.32 Aligned_cols=103 Identities=13% Similarity=0.197 Sum_probs=80.7
Q ss_pred CCEEEEEec----ChhHHHHHHHHHhCCCEEEEECCCC--CCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 169 GKRVGIVGL----GSIGSLVAKRLDAFGCSISYNSRTK--KPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 169 g~~vgIiG~----G~IG~~~A~~l~~~g~~V~~~~~~~--~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
-++|+|||+ |++|..++++|...|++|+.+++.. +...+...+.++.|+....|++++++| .+....++. +.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~-~~ 90 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ-EA 90 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH-HH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH-HH
Confidence 678999999 8999999999999999988888876 444466667789999889999999999 466666664 34
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEE
Q 022233 243 LSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGA 278 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a 278 (300)
.+ ...++++++.+ .. ++++.+++++..+.-.
T Consensus 91 ~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 91 IA-IGAKTLWLQLG--VI--NEQAAVLAREAGLSVV 121 (145)
T ss_dssp HH-HTCCEEECCTT--CC--CHHHHHHHHTTTCEEE
T ss_pred HH-cCCCEEEEcCC--hH--HHHHHHHHHHcCCEEE
Confidence 44 56677888764 22 7888888888887643
No 116
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.71 E-value=4e-08 Score=86.28 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=75.9
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEE-EEECCCCCCCCCCcccCCHHHHh-hcCCEEEEecCCChhhhhcchHHHHhcCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSI-SYNSRTKKPSVSYPFYSNVCELA-ANCDILIICCGLTAETHHMINKQVLSALG 247 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V-~~~~~~~~~~~~~~~~~~l~e~l-~~aDvV~l~~p~~~~t~~li~~~~l~~mk 247 (300)
++|||||+|.||+.+++.+...|+++ .++|++... .. .+.++++++ .++|+|++++|.....+ .....++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~-~~--~~~~~~~l~~~~~DvVv~~~~~~~~~~-----~~~~~l~ 72 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEH-EK--MVRGIDEFLQREMDVAVEAASQQAVKD-----YAEKILK 72 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCC-TT--EESSHHHHTTSCCSEEEECSCHHHHHH-----HHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcch-hh--hcCCHHHHhcCCCCEEEECCCHHHHHH-----HHHHHHH
Confidence 48999999999999999998889997 688887532 11 467899999 69999999998543322 2345577
Q ss_pred CCcEEEEcCCCcccCH---HHHHHHHHhCCc
Q 022233 248 KEGVVINIGRGPIIDE---QELVRCLVQGEI 275 (300)
Q Consensus 248 ~ga~lIn~srg~~vd~---~aL~~aL~~~~i 275 (300)
.|..+|+.+.+..-+. +.|.++.++.++
T Consensus 73 ~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~ 103 (236)
T 2dc1_A 73 AGIDLIVLSTGAFADRDFLSRVREVCRKTGR 103 (236)
T ss_dssp TTCEEEESCGGGGGSHHHHHHHHHHHHHHCC
T ss_pred CCCcEEEECcccCChHHHHHHHHHHHHhcCC
Confidence 8999999998887666 678777776544
No 117
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.71 E-value=5e-08 Score=91.24 Aligned_cols=180 Identities=14% Similarity=0.079 Sum_probs=113.2
Q ss_pred CcEEEEEeCCCCCCHHHHccCCCcceEEEcCCCCCCCChhHHhhCCeEEEeC---CCCC-----chhHHHHHH--HHHHH
Q 022233 63 SVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANA---GNVF-----SEDVADLAV--GLLID 132 (300)
Q Consensus 63 ~~d~ii~~~~~~~~~e~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~---p~~~-----~~~vAE~~l--~l~L~ 132 (300)
++|+|+. ...+...+.....+++.++......++.-.++.+.++|+...|. |.-. -.++++.+- +.+++
T Consensus 66 ~ad~i~~-vksP~~~~~~~~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~g 144 (361)
T 1pjc_A 66 SREMVVK-VKEPLPAEYDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFG 144 (361)
T ss_dssp TSSEEEC-SSCCCGGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHH
T ss_pred cCCeEEE-ECCCCHHHHHhhcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHH
Confidence 5788775 34455444433446766666655566654567778889988763 4211 134444333 33443
Q ss_pred HhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----C
Q 022233 133 LLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----S 207 (300)
Q Consensus 133 ~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~ 207 (300)
... +... ..|+ .| .+..-..+.+++|+|+|.|.+|+.+++.++.+|++|++++++++... +
T Consensus 145 A~n-t~~~----~~g~--------G~-~l~~l~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~ 210 (361)
T 1pjc_A 145 ARF-LERQ----QGGR--------GV-LLGGVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF 210 (361)
T ss_dssp HHH-TSGG----GTSC--------CC-CTTCBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred HHH-Hhhc----cCCC--------ce-eccCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh
Confidence 322 1111 1111 11 11001247789999999999999999999999999999998764311 1
Q ss_pred Ccc-------cCCHHHHhhcCCEEEEecCCCh-hhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 208 YPF-------YSNVCELAANCDILIICCGLTA-ETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 208 ~~~-------~~~l~e~l~~aDvV~l~~p~~~-~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
... ..++.+.+.++|+|+.+++... ....++.++.++.|++|++++|++-
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 211 GSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp GGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 111 1245677889999999987533 2345567888999999999999983
No 118
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.70 E-value=7.3e-09 Score=91.97 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=70.4
Q ss_pred CEEEEEecChhHHHHHHHHHhCC-CEEEEECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFG-CSISYNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g-~~V~~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
++|+|||+|.||+.+|+.|...| .+|.+|+|+++.. .+.....++++++ ++|+|++++| ....+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---- 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---- 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH----
Confidence 48999999999999999999989 9999999975431 1333445677778 9999999999 55554443
Q ss_pred HhcCC-CCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 243 LSALG-KEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 243 l~~mk-~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
..++ ++.++|+++.|--. +.|.+.+..+
T Consensus 75 -~~l~~~~~ivv~~~~g~~~--~~l~~~~~~~ 103 (263)
T 1yqg_A 75 -KNIRTNGALVLSVAAGLSV--GTLSRYLGGT 103 (263)
T ss_dssp -TTCCCTTCEEEECCTTCCH--HHHHHHTTSC
T ss_pred -HHhccCCCEEEEecCCCCH--HHHHHHcCCC
Confidence 3332 28999999665433 6677777654
No 119
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.68 E-value=1.2e-08 Score=87.70 Aligned_cols=112 Identities=19% Similarity=0.220 Sum_probs=80.7
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCC------C-----C-cccCCHHHHhhcCCEEEEecCCChhhhh
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSV------S-----Y-PFYSNVCELAANCDILIICCGLTAETHH 236 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------~-----~-~~~~~l~e~l~~aDvV~l~~p~~~~t~~ 236 (300)
++|+|+| .|.||+.+++.|...|++|.+++|+++... + . ....+++++++++|+|++++|. ..++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~-~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPW-EHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCH-HHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCCh-hhHHH
Confidence 4799999 999999999999999999999998754211 1 0 1135678889999999999984 44444
Q ss_pred cchHHHHhcCCCCcEEEEcCCCcccC------------HHHHHHHHHhCCceEEEeeCCCCCCC
Q 022233 237 MINKQVLSALGKEGVVINIGRGPIID------------EQELVRCLVQGEIKGAGLDVFENEPD 288 (300)
Q Consensus 237 li~~~~l~~mk~ga~lIn~srg~~vd------------~~aL~~aL~~~~i~~a~LDV~~~EP~ 288 (300)
++. ++.+.++ +.++|+++.|--.+ .+.+.+.+... ..++++.++|.
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~----~~v~~~~~~~~ 137 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESE----KVVSALHTIPA 137 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCS----CEEECCTTCCH
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCC----eEEEEccchHH
Confidence 443 3444454 89999999876532 57777777532 34678777663
No 120
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.67 E-value=4e-08 Score=95.36 Aligned_cols=103 Identities=14% Similarity=0.204 Sum_probs=77.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------------CC-------------CcccCCHHHHhhcCCE
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------------VS-------------YPFYSNVCELAANCDI 223 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------------~~-------------~~~~~~l~e~l~~aDv 223 (300)
.++|+|||+|.||..+|..|+..|++|++||++++.. .+ .....++++.+++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 4699999999999999999999999999999875321 01 1223467788999999
Q ss_pred EEEecCCC---------hhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 224 LIICCGLT---------AETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 224 V~l~~p~~---------~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
|++++|.. ..++..+ +.+.+.++++.++|+.|...+-..+.+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999963 4444444 456677999999999995555455556655544
No 121
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.64 E-value=4.3e-08 Score=90.62 Aligned_cols=101 Identities=17% Similarity=0.176 Sum_probs=75.5
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC------C-----C---------cccCCHHHHhhcCCEEEEecC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV------S-----Y---------PFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------~-----~---------~~~~~l~e~l~~aDvV~l~~p 229 (300)
++|+|||+|.||..+|..|...|++|.+++|+++... + . ....+++++++++|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 6999999999999999999999999999998753210 1 0 134578888999999999999
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
.... ..++ +++.+.+++++++|++ -|.......+.+.+.+.
T Consensus 85 ~~~~-~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~~ 125 (359)
T 1bg6_A 85 AIHH-ASIA-ANIASYISEGQLIILN-PGATGGALEFRKILREN 125 (359)
T ss_dssp GGGH-HHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHHT
T ss_pred chHH-HHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHhc
Confidence 6654 4444 5667789999999999 44223444466666553
No 122
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.64 E-value=5.8e-08 Score=92.16 Aligned_cols=101 Identities=15% Similarity=0.117 Sum_probs=78.0
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCC------------------cccCCHHHHhhcCCEEEE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSY------------------PFYSNVCELAANCDILII 226 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~------------------~~~~~l~e~l~~aDvV~l 226 (300)
++|+|||+|.||..+|..|.. |++|++++++++.. .+. ....++.+.+++||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 489999999999999999999 99999999875321 111 223467788999999999
Q ss_pred ecCCCh----------hhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 227 CCGLTA----------ETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 227 ~~p~~~----------~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
++|... .++..+ +.+.+ ++++.++|+.|.-++-..+.+.+.+.+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 999763 344444 45566 8999999998888877778888777554
No 123
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.64 E-value=6.6e-08 Score=93.69 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=77.0
Q ss_pred CCEEEEEecChhHHHHHHHHHhC-CC-EEEEECCCCC----CC----CC---C--------------------cccCCHH
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAF-GC-SISYNSRTKK----PS----VS---Y--------------------PFYSNVC 215 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~-g~-~V~~~~~~~~----~~----~~---~--------------------~~~~~l~ 215 (300)
-++|+|||+|.||..+|..|... |+ +|++||++++ .. .+ . ....+ .
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ 96 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-F 96 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-H
Confidence 36999999999999999999999 99 9999999876 21 00 0 11123 5
Q ss_pred HHhhcCCEEEEecCCCh--------hhhhcc--hHHHHhcCCCCcEEEEcCCCcccCHHHHHHH
Q 022233 216 ELAANCDILIICCGLTA--------ETHHMI--NKQVLSALGKEGVVINIGRGPIIDEQELVRC 269 (300)
Q Consensus 216 e~l~~aDvV~l~~p~~~--------~t~~li--~~~~l~~mk~ga~lIn~srg~~vd~~aL~~a 269 (300)
+++++||+|++++|... +...+. .+.+.+.+++|.++|+.|.-++-..+.+.+.
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 77899999999999652 333233 3567788999999999999888877878764
No 124
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.64 E-value=5.7e-08 Score=89.95 Aligned_cols=90 Identities=22% Similarity=0.215 Sum_probs=70.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhCC-------CEEEEECCCCC-----CCC-------------------CCcccCCHHHH
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFG-------CSISYNSRTKK-----PSV-------------------SYPFYSNVCEL 217 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g-------~~V~~~~~~~~-----~~~-------------------~~~~~~~l~e~ 217 (300)
.++|+|||+|.||..+|..|...| .+|.+|+|++. ... +.....+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 468999999999999999999888 89999998765 100 01123578888
Q ss_pred hhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcc
Q 022233 218 AANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 218 l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 260 (300)
+++||+|++++|. ..++.++ +++.+.+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 9999999999995 4555554 456677889999999988754
No 125
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.63 E-value=5.1e-08 Score=87.30 Aligned_cols=88 Identities=19% Similarity=0.256 Sum_probs=67.0
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----C--Cc-----ccCCHHHHhhcCCEEEEecCCChhhhhc
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----S--YP-----FYSNVCELAANCDILIICCGLTAETHHM 237 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~--~~-----~~~~l~e~l~~aDvV~l~~p~~~~t~~l 237 (300)
++|+|||+|.||..+|..|...|++|.+|+|+++... + .. ...+..+.++++|+|++++|... ++.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~-~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQ-VSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGG-HHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHh-HHHH
Confidence 4899999999999999999999999999998765321 1 00 01233567889999999999654 4555
Q ss_pred chHHHHhcCCCCcEEEEcCCCc
Q 022233 238 INKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~ 259 (300)
+ +++.+.++++.++|++..|-
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSSS
T ss_pred H-HHHHhhCCCCCEEEEecCCC
Confidence 4 45667789999999986653
No 126
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.63 E-value=1.6e-08 Score=98.33 Aligned_cols=114 Identities=16% Similarity=0.213 Sum_probs=83.2
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----------------CCC-------------cccCCHHHHhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----------------VSY-------------PFYSNVCELAA 219 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------------~~~-------------~~~~~l~e~l~ 219 (300)
-++|||||+|.||..||..+...|++|++||++++.. .+. ....+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 3589999999999999999999999999999976421 111 1234554 689
Q ss_pred cCCEEEEecCCChhhhhcchHHHHhcCCCCcEE-EEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 022233 220 NCDILIICCGLTAETHHMINKQVLSALGKEGVV-INIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEP 287 (300)
Q Consensus 220 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~l-In~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP 287 (300)
+||+|+.++|...+...-+-+++.+.++++++| .|+|.-++ ..+.+.+.. .-...++..|.+-|
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~~~~~-p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAAEIKN-PERVAGLHFFNPAP 148 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTTTSSS-GGGEEEEEECSSTT
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHHHccC-ccceEEeeecChhh
Confidence 999999999988776655556777889999998 46765543 455555533 23457777777555
No 127
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.61 E-value=6.1e-08 Score=88.86 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=73.2
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECC--CCCCC-----CCC-----------cccC--CHHHHhhcCCEEEEecC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSR--TKKPS-----VSY-----------PFYS--NVCELAANCDILIICCG 229 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~--~~~~~-----~~~-----------~~~~--~l~e~l~~aDvV~l~~p 229 (300)
++|+|||+|.||..+|..|...|++|++++| +++.. .+. .... ++.++++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4899999999999999999999999999998 54321 111 1223 67788899999999999
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCCc---c-cCHHHHHHHHHh
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRGP---I-IDEQELVRCLVQ 272 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg~---~-vd~~aL~~aL~~ 272 (300)
.. .++.++ ..+.+ ++++.++|+++.|- . -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 65 445444 45566 88999999998775 1 123445566654
No 128
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.61 E-value=3.6e-08 Score=92.40 Aligned_cols=88 Identities=14% Similarity=0.196 Sum_probs=68.5
Q ss_pred CEEEEEecChhHHHHHHHHHhCC-------CEEEEECCCCC-----CCC-------------------CCcccCCHHHHh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFG-------CSISYNSRTKK-----PSV-------------------SYPFYSNVCELA 218 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g-------~~V~~~~~~~~-----~~~-------------------~~~~~~~l~e~l 218 (300)
++|+|||.|.||..+|..|...| .+|.+|+|+++ ... +.....++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 48999999999999999999888 89999998765 110 112235678889
Q ss_pred hcCCEEEEecCCChhhhhcchHHHHh----cCCCCcEEEEcCCCc
Q 022233 219 ANCDILIICCGLTAETHHMINKQVLS----ALGKEGVVINIGRGP 259 (300)
Q Consensus 219 ~~aDvV~l~~p~~~~t~~li~~~~l~----~mk~ga~lIn~srg~ 259 (300)
++||+|++++|. ..++.++ .++.+ .+++++++|+++.|-
T Consensus 102 ~~aDvVilav~~-~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred cCCCEEEEcCCH-HHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 999999999994 5556555 34555 688899999998873
No 129
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.60 E-value=5.5e-08 Score=94.41 Aligned_cols=104 Identities=13% Similarity=0.199 Sum_probs=78.9
Q ss_pred CEEEEEecChhHHHHHHHHHhC--CCEEEEECCCCCCC------------CC------------CcccCCHHHHhhcCCE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF--GCSISYNSRTKKPS------------VS------------YPFYSNVCELAANCDI 223 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~--g~~V~~~~~~~~~~------------~~------------~~~~~~l~e~l~~aDv 223 (300)
++|+|||+|.||..+|..|... |++|++||++++.. .+ .....++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5999999999999999999987 78999999865321 00 1123466788899999
Q ss_pred EEEecCCChh--------------hhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh-CC
Q 022233 224 LIICCGLTAE--------------THHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQ-GE 274 (300)
Q Consensus 224 V~l~~p~~~~--------------t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~-~~ 274 (300)
|++++|.... ++..+ +.+.+.+++|.++|+.|.-.+-..+.+.+.+++ .+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~ 154 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQK 154 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhC
Confidence 9999986431 23222 456778999999999998777777778888877 44
No 130
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.60 E-value=7.2e-08 Score=92.23 Aligned_cols=106 Identities=16% Similarity=0.196 Sum_probs=77.3
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----C-C-cccCCHHHH---------------hhcCCEEE
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----S-Y-PFYSNVCEL---------------AANCDILI 225 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----~-~-~~~~~l~e~---------------l~~aDvV~ 225 (300)
-+|.++.|||+|.||..+|..|...|++|++||++++... + . .....++|+ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 5689999999999999999999999999999999865311 1 0 111233333 35799999
Q ss_pred EecCCChhh--------hhcc--hHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 226 ICCGLTAET--------HHMI--NKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 226 l~~p~~~~t--------~~li--~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
+|+|..... ..+. .+.+.+.|++|.++|+.|+-++-..+.+.+.+.+
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e 145 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIE 145 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHH
Confidence 999965421 1232 2567788999999999999988888888776543
No 131
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.58 E-value=7.1e-08 Score=90.17 Aligned_cols=93 Identities=15% Similarity=0.142 Sum_probs=73.3
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-------------C------CcccCCHHHHhhcCCEEEEecC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-------------S------YPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-------------~------~~~~~~l~e~l~~aDvV~l~~p 229 (300)
.++|+|||.|.||..+|..|...|.+|.+|+|+++... + .....++++++++||+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 47899999999999999999999999999998743210 0 1223678899999999999999
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCCcccCH
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRGPIIDE 263 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~ 263 (300)
. ...+.++ +++...++++.++|+++.|-..++
T Consensus 109 ~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t 140 (356)
T 3k96_A 109 S-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKGS 140 (356)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTTT
T ss_pred H-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcCc
Confidence 4 3555554 566778899999999988766553
No 132
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.57 E-value=8.4e-08 Score=86.64 Aligned_cols=105 Identities=18% Similarity=0.157 Sum_probs=75.0
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCCCC------cccCCHHHHhhcCCEEEEecCCC--hhhhh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSVSY------PFYSNVCELAANCDILIICCGLT--AETHH 236 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~~~------~~~~~l~e~l~~aDvV~l~~p~~--~~t~~ 236 (300)
++.|+++.|+|.|.+|++++..|...|+ +|++++|+.+..... ....++.++++++|+||.++|.. +....
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~ 193 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDS 193 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcC
Confidence 4678999999999999999999999999 899999987543211 12345667788999999999975 33222
Q ss_pred cchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 237 MINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 237 li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.++ .+.++++.+++|+...+. .+. |.++.++..+
T Consensus 194 ~l~---~~~l~~~~~V~D~vY~P~-~T~-ll~~A~~~G~ 227 (277)
T 3don_A 194 VIS---LNRLASHTLVSDIVYNPY-KTP-ILIEAEQRGN 227 (277)
T ss_dssp SSC---CTTCCSSCEEEESCCSSS-SCH-HHHHHHHTTC
T ss_pred CCC---HHHcCCCCEEEEecCCCC-CCH-HHHHHHHCcC
Confidence 232 456889999999998754 444 5555555544
No 133
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.57 E-value=3.7e-08 Score=85.67 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=70.8
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEE-ECCCCCCCC------CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHH
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISY-NSRTKKPSV------SYPFYSNVCELAANCDILIICCGLTAETHHMINKQ 241 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~-~~~~~~~~~------~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~ 241 (300)
-++|+|||+|.||+.+|+.|...|++|.+ ++|+++... +.....+..+.++++|+|++++|.. ....++. +
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~-~ 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYD-SIADIVT-Q 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGG-GHHHHHT-T
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChH-HHHHHHH-H
Confidence 46899999999999999999999999988 998865421 2223345566789999999999843 2332221 1
Q ss_pred HHhcCCCCcEEEEcCCCcc------------cCHHHHHHHHHhCCc
Q 022233 242 VLSALGKEGVVINIGRGPI------------IDEQELVRCLVQGEI 275 (300)
Q Consensus 242 ~l~~mk~ga~lIn~srg~~------------vd~~aL~~aL~~~~i 275 (300)
+ .. .++.++|+++-|-- ...+.+.+.+...++
T Consensus 101 l-~~-~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~v 144 (220)
T 4huj_A 101 V-SD-WGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKV 144 (220)
T ss_dssp C-SC-CTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEE
T ss_pred h-hc-cCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCE
Confidence 1 12 35789999986541 145666666654444
No 134
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.56 E-value=7.3e-08 Score=84.74 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=58.6
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGK 248 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ 248 (300)
.++|||||+|+||.++|+.|+..|++|.+|++. ++ +++|| ++++|.. .+..++ .++...+++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~-------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~l~~ 67 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP-------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAFARR 67 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG-------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTTCCT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH-------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHhcCC
Confidence 469999999999999999999999999999883 22 67899 8889976 555555 566777899
Q ss_pred CcEEEEcC
Q 022233 249 EGVVINIG 256 (300)
Q Consensus 249 ga~lIn~s 256 (300)
|.++|+++
T Consensus 68 g~ivvd~s 75 (232)
T 3dfu_A 68 GQMFLHTS 75 (232)
T ss_dssp TCEEEECC
T ss_pred CCEEEEEC
Confidence 99999985
No 135
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.55 E-value=1.4e-07 Score=85.07 Aligned_cols=80 Identities=21% Similarity=0.366 Sum_probs=67.0
Q ss_pred ccccCCCEEEEEecCh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 164 GSKLGGKRVGIVGLGS-IGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~-IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
+.++.|+++.|||.|. +|+.+|+.|...|++|++.+++. .++.+.+++||+|+.+++.. ++|.++.
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------~~L~~~~~~ADIVI~Avg~p----~lI~~~~ 220 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---------KNLRHHVENADLLIVAVGKP----GFIPGDW 220 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---------SCHHHHHHHCSEEEECSCCT----TCBCTTT
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhccCCEEEECCCCc----CcCCHHH
Confidence 4568999999999997 59999999999999999886542 47999999999999999832 3566554
Q ss_pred HhcCCCCcEEEEcCCCc
Q 022233 243 LSALGKEGVVINIGRGP 259 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~ 259 (300)
+|+|+++||+|.-.
T Consensus 221 ---vk~GavVIDVgi~r 234 (288)
T 1b0a_A 221 ---IKEGAIVIDVGINR 234 (288)
T ss_dssp ---SCTTCEEEECCCEE
T ss_pred ---cCCCcEEEEccCCc
Confidence 58999999999654
No 136
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.54 E-value=1.7e-08 Score=94.14 Aligned_cols=90 Identities=13% Similarity=0.141 Sum_probs=69.1
Q ss_pred EEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-------------------CCcccCCHHHHhhcCCEEEEecCCC
Q 022233 171 RVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-------------------SYPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-------------------~~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
+|+|||+|.||..+|..|...|++|.+|+|+++... +.....++.++++++|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999998753210 112235788889999999999994
Q ss_pred hhhhhcchHH---HHhcCCC-CcEEEEcCCCccc
Q 022233 232 AETHHMINKQ---VLSALGK-EGVVINIGRGPII 261 (300)
Q Consensus 232 ~~t~~li~~~---~l~~mk~-ga~lIn~srg~~v 261 (300)
..++.++... +...+++ +.++|+++.|-..
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 5556555331 5566778 8999999877443
No 137
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.54 E-value=2.1e-07 Score=83.93 Aligned_cols=80 Identities=19% Similarity=0.354 Sum_probs=67.1
Q ss_pred ccccCCCEEEEEecCh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 164 GSKLGGKRVGIVGLGS-IGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~-IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
+.++.|+++.|||.|. +|+.+|..|...|++|++.+++. .++++.+++||+|+.+++. .++|.++
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------~~L~~~~~~ADIVI~Avg~----p~~I~~~- 220 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------KDLSLYTRQADLIIVAAGC----VNLLRSD- 220 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------SCHHHHHTTCSEEEECSSC----TTCBCGG-
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhhcCCEEEECCCC----CCcCCHH-
Confidence 4568999999999998 69999999999999999887642 4799999999999999983 3456554
Q ss_pred HhcCCCCcEEEEcCCCc
Q 022233 243 LSALGKEGVVINIGRGP 259 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~ 259 (300)
.+|+|+++||++.-.
T Consensus 221 --~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 221 --MVKEGVIVVDVGINR 235 (285)
T ss_dssp --GSCTTEEEEECCCEE
T ss_pred --HcCCCeEEEEeccCc
Confidence 469999999998654
No 138
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.53 E-value=1.9e-07 Score=84.77 Aligned_cols=80 Identities=21% Similarity=0.358 Sum_probs=66.4
Q ss_pred ccccCCCEEEEEecCh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHH--HHhhcCCEEEEecCCChhhhhcchH
Q 022233 164 GSKLGGKRVGIVGLGS-IGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVC--ELAANCDILIICCGLTAETHHMINK 240 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~-IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~--e~l~~aDvV~l~~p~~~~t~~li~~ 240 (300)
+.++.|+++.|||.|. +|+.+|..|...|++|+++++.. .+++ +.+++||+|+.+++. .++|.+
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T---------~~l~l~~~~~~ADIVI~Avg~----p~~I~~ 226 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT---------STEDMIDYLRTADIVIAAMGQ----PGYVKG 226 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS---------CHHHHHHHHHTCSEEEECSCC----TTCBCG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC---------CCchhhhhhccCCEEEECCCC----CCCCcH
Confidence 4568999999999988 69999999999999999987732 2577 999999999999985 335655
Q ss_pred HHHhcCCCCcEEEEcCCCc
Q 022233 241 QVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 241 ~~l~~mk~ga~lIn~srg~ 259 (300)
+ .+|+|+++||++.-.
T Consensus 227 ~---~vk~GavVIDvgi~~ 242 (300)
T 4a26_A 227 E---WIKEGAAVVDVGTTP 242 (300)
T ss_dssp G---GSCTTCEEEECCCEE
T ss_pred H---hcCCCcEEEEEeccC
Confidence 4 369999999998643
No 139
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.53 E-value=4.4e-08 Score=90.36 Aligned_cols=96 Identities=22% Similarity=0.259 Sum_probs=69.4
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----C-----------CcccCCHHHHhhcCCEEEEecCCCh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----S-----------YPFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~-----------~~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
.++|+|||+|.||..+|.+|...|.+|.+|+|+++... + .....++++ ++.+|+|++++|. .
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-Q 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-G
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-H
Confidence 56999999999999999999999999999999753210 1 233457778 8899999999994 5
Q ss_pred hhhhcchHHHHhcCC-CCcEEEEcCCCccc-CHHHHHHHHH
Q 022233 233 ETHHMINKQVLSALG-KEGVVINIGRGPII-DEQELVRCLV 271 (300)
Q Consensus 233 ~t~~li~~~~l~~mk-~ga~lIn~srg~~v-d~~aL~~aL~ 271 (300)
.++.++ ..++ ++.++|+++.|--. ..+.+.+.+.
T Consensus 92 ~~~~v~-----~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~ 127 (335)
T 1z82_A 92 YIREHL-----LRLPVKPSMVLNLSKGIEIKTGKRVSEIVE 127 (335)
T ss_dssp GHHHHH-----TTCSSCCSEEEECCCCCCTTTCCCHHHHHH
T ss_pred HHHHHH-----HHhCcCCCEEEEEeCCCCCCccCcHHHHHH
Confidence 555443 3344 78999999977332 2234444443
No 140
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.52 E-value=2.3e-07 Score=83.19 Aligned_cols=77 Identities=17% Similarity=0.277 Sum_probs=65.3
Q ss_pred cCCCEEEEEecCh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhc
Q 022233 167 LGGKRVGIVGLGS-IGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSA 245 (300)
Q Consensus 167 l~g~~vgIiG~G~-IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~ 245 (300)
+.|+++.|||.|. +|+.+|+.|...|++|++.+++ ..++++.+++||+|+.+++. .++|.++ .
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~---~ 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK---------TKDIGSMTRSSKIVVVAVGR----PGFLNRE---M 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSCHHHHHHHSSEEEECSSC----TTCBCGG---G
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC---------cccHHHhhccCCEEEECCCC----CccccHh---h
Confidence 8899999999986 7999999999999999988763 25799999999999999985 2356654 3
Q ss_pred CCCCcEEEEcCCCc
Q 022233 246 LGKEGVVINIGRGP 259 (300)
Q Consensus 246 mk~ga~lIn~srg~ 259 (300)
+|+|+++||++.-.
T Consensus 212 vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 VTPGSVVIDVGINY 225 (276)
T ss_dssp CCTTCEEEECCCEE
T ss_pred ccCCcEEEEeccCc
Confidence 69999999999643
No 141
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.52 E-value=2.4e-07 Score=83.57 Aligned_cols=80 Identities=24% Similarity=0.363 Sum_probs=66.9
Q ss_pred ccccCCCEEEEEecCh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 164 GSKLGGKRVGIVGLGS-IGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~-IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
+.++.|+++.|||.|. +|+.+|..|...|++|++..++ ..++++.+++||+|+.+++. .++|.++
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~- 221 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF---------TTDLKSHTTKADILIVAVGK----PNFITAD- 221 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHTTCSEEEECCCC----TTCBCGG-
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---------chhHHHhcccCCEEEECCCC----CCCCCHH-
Confidence 4568999999999998 6999999999999999988764 24799999999999999973 3456554
Q ss_pred HhcCCCCcEEEEcCCCc
Q 022233 243 LSALGKEGVVINIGRGP 259 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~ 259 (300)
.+|+|+++||++.-.
T Consensus 222 --~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 222 --MVKEGAVVIDVGINH 236 (285)
T ss_dssp --GSCTTCEEEECCCEE
T ss_pred --HcCCCcEEEEecccC
Confidence 469999999998644
No 142
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.52 E-value=1.8e-07 Score=85.97 Aligned_cols=92 Identities=17% Similarity=0.217 Sum_probs=70.4
Q ss_pred ccccCCCEEEEEecChh-HHHHHHHHHhCCCEEEEECCCCCC------CCCC--c-c-----c--CCHHHHhhcCCEEEE
Q 022233 164 GSKLGGKRVGIVGLGSI-GSLVAKRLDAFGCSISYNSRTKKP------SVSY--P-F-----Y--SNVCELAANCDILII 226 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~I-G~~~A~~l~~~g~~V~~~~~~~~~------~~~~--~-~-----~--~~l~e~l~~aDvV~l 226 (300)
|.++.|+++.|||.|.| |+.+|+.|...|.+|++.+|+... .... . . . .++++.+++||+|+.
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 66899999999999976 999999999999999999886211 1111 1 1 1 568899999999999
Q ss_pred ecCCChhhhhcchHHHHhcCCCCcEEEEcCCCccc
Q 022233 227 CCGLTAETHHMINKQVLSALGKEGVVINIGRGPII 261 (300)
Q Consensus 227 ~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~v 261 (300)
+++.. .-+|..+. +|+|+++||+|...=+
T Consensus 252 Atg~p---~~vI~~e~---vk~GavVIDVgi~rD~ 280 (320)
T 1edz_A 252 GVPSE---NYKFPTEY---IKEGAVCINFACTKNF 280 (320)
T ss_dssp CCCCT---TCCBCTTT---SCTTEEEEECSSSCCB
T ss_pred CCCCC---cceeCHHH---cCCCeEEEEcCCCccc
Confidence 98742 12265554 5899999999976533
No 143
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.51 E-value=2.3e-07 Score=83.50 Aligned_cols=81 Identities=17% Similarity=0.367 Sum_probs=67.5
Q ss_pred ccccCCCEEEEEecChh-HHHHHHHHHhC--CCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchH
Q 022233 164 GSKLGGKRVGIVGLGSI-GSLVAKRLDAF--GCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINK 240 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~I-G~~~A~~l~~~--g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~ 240 (300)
+.++.|+++.|||.|.| |+.+|+.|... |.+|++.+++. .++.+.+++||+|+.+++.. ++|.+
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------~~L~~~~~~ADIVI~Avg~p----~~I~~ 219 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------RDLPALTRQADIVVAAVGVA----HLLTA 219 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------SCHHHHHTTCSEEEECSCCT----TCBCG
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------hHHHHHHhhCCEEEECCCCC----cccCH
Confidence 44689999999999986 99999999998 89999886543 57999999999999999732 35665
Q ss_pred HHHhcCCCCcEEEEcCCCcc
Q 022233 241 QVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 241 ~~l~~mk~ga~lIn~srg~~ 260 (300)
+. +|+|+++||+|.-.+
T Consensus 220 ~~---vk~GavVIDVgi~r~ 236 (281)
T 2c2x_A 220 DM---VRPGAAVIDVGVSRT 236 (281)
T ss_dssp GG---SCTTCEEEECCEEEE
T ss_pred HH---cCCCcEEEEccCCCC
Confidence 54 589999999997654
No 144
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.51 E-value=8.6e-08 Score=92.61 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=78.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-------------------------C--CcccCCHHHHhhcC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-------------------------S--YPFYSNVCELAANC 221 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-------------------------~--~~~~~~l~e~l~~a 221 (300)
-++|+|||+|.||..+|..+...|++|+++|++++... . .....++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 45899999999999999999999999999998753210 0 0112455 568899
Q ss_pred CEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 222 DILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 222 DvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
|+|+.++|...+...-+-+++.+.++++++|++. ..++ ....|.+.+... -..+++..|.
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~sn-Ts~~-~~~~la~~~~~~-~~~ig~hf~~ 175 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTN-TSAL-NVDDIASSTDRP-QLVIGTHFFS 175 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC-CSSS-CHHHHHTTSSCG-GGEEEEEECS
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeC-CCCc-CHHHHHHHhcCC-cceEEeecCC
Confidence 9999999977655544445677778999999873 3333 334666665432 2235667674
No 145
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.50 E-value=4.7e-07 Score=82.20 Aligned_cols=82 Identities=18% Similarity=0.301 Sum_probs=67.8
Q ss_pred ccccCCCEEEEEecCh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 164 GSKLGGKRVGIVGLGS-IGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~-IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
+.++.|+++.|||.|. +|+.+|+.|...|++|++.+++ ..++.+.+++||+|+.+++.. ++|..+.
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------t~~L~~~~~~ADIVI~Avg~p----~~I~~~~ 226 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK---------TAHLDEEVNKGDILVVATGQP----EMVKGEW 226 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHTTCSEEEECCCCT----TCBCGGG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC---------cccHHHHhccCCEEEECCCCc----ccCCHHH
Confidence 4568999999999996 6999999999999999988654 247999999999999999852 3566554
Q ss_pred HhcCCCCcEEEEcCCCccc
Q 022233 243 LSALGKEGVVINIGRGPII 261 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~~v 261 (300)
+|+|+++||+|.-.+-
T Consensus 227 ---vk~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 227 ---IKPGAIVIDCGINYVP 242 (301)
T ss_dssp ---SCTTCEEEECCCBC--
T ss_pred ---cCCCcEEEEccCCCcc
Confidence 5899999999986543
No 146
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.50 E-value=8.2e-08 Score=86.86 Aligned_cols=104 Identities=16% Similarity=0.184 Sum_probs=73.7
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcc------------cCCHHHHhh---cCCEEEEecC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPF------------YSNVCELAA---NCDILIICCG 229 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~------------~~~l~e~l~---~aDvV~l~~p 229 (300)
++|+|||+|.||..+|..|...|++|++++|+++... +... ..+.+++.+ ++|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5899999999999999999999999999998753211 1100 113344444 8999999999
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
. ..++.++ +++.+.++++.++|+++.|- -..+.+.+.+.+.++.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 4 4555554 45667789999999998753 3346666666554443
No 147
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.49 E-value=3.8e-07 Score=82.23 Aligned_cols=80 Identities=20% Similarity=0.433 Sum_probs=66.6
Q ss_pred ccccCCCEEEEEecCh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 164 GSKLGGKRVGIVGLGS-IGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~-IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
+.++.|+++.|||.|. +|+.+|..|...|++|++..+.. .++++.+++||+|+.+++. .++|.++
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T---------~~L~~~~~~ADIVI~Avg~----p~~I~~~- 221 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT---------RDLADHVSRADLVVVAAGK----PGLVKGE- 221 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC---------SCHHHHHHTCSEEEECCCC----TTCBCGG-
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC---------cCHHHHhccCCEEEECCCC----CCCCCHH-
Confidence 4568999999999987 79999999999999999876532 3799999999999999974 3456554
Q ss_pred HhcCCCCcEEEEcCCCc
Q 022233 243 LSALGKEGVVINIGRGP 259 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~ 259 (300)
.+|+|+++||++.-.
T Consensus 222 --~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 222 --WIKEGAIVIDVGINR 236 (286)
T ss_dssp --GSCTTCEEEECCSCS
T ss_pred --HcCCCeEEEEecccc
Confidence 469999999998543
No 148
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.44 E-value=2.2e-07 Score=84.66 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=76.1
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC------CC---cc--cCCHHHHhhcCCEEEEecCCChh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV------SY---PF--YSNVCELAANCDILIICCGLTAE 233 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~------~~---~~--~~~l~e~l~~aDvV~l~~p~~~~ 233 (300)
++.+++++|+|.|.+|++++..|...|+ +|++++|+.+... +. .. ..++.+.+.++|+|+.++|....
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~ 217 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMH 217 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCS
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCC
Confidence 3678999999999999999999999998 9999999864311 11 11 12466778899999999997643
Q ss_pred h--hh-cchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 234 T--HH-MINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 234 t--~~-li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
. .. .++ .+.++++.+++|++.. +..+. |.++.++.++
T Consensus 218 ~~~~~~~i~---~~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~G~ 257 (297)
T 2egg_A 218 PRVEVQPLS---LERLRPGVIVSDIIYN-PLETK-WLKEAKARGA 257 (297)
T ss_dssp SCCSCCSSC---CTTCCTTCEEEECCCS-SSSCH-HHHHHHHTTC
T ss_pred CCCCCCCCC---HHHcCCCCEEEEcCCC-CCCCH-HHHHHHHCcC
Confidence 1 11 132 3457899999999985 44444 6666666555
No 149
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.43 E-value=2.9e-07 Score=81.98 Aligned_cols=99 Identities=18% Similarity=0.147 Sum_probs=74.3
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC------CCcccCCHHHHhhcCCEEEEecCCC--hhhhhc
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV------SYPFYSNVCELAANCDILIICCGLT--AETHHM 237 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~------~~~~~~~l~e~l~~aDvV~l~~p~~--~~t~~l 237 (300)
+.| +++|||.|.+|++++..|...|. +|.+++|+.+... +.....++.+.++++|+|++++|.. ++ ...
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~~~ 184 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-ELP 184 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-CCS
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-CCC
Confidence 568 99999999999999999999998 8999999865321 1113456788899999999999864 22 223
Q ss_pred chHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 238 INKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
++.+. ++++.+++|+.-+ .++-|.++.+.|
T Consensus 185 i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 185 VSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 44433 5789999999998 555555666555
No 150
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.42 E-value=1e-07 Score=96.75 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=79.9
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----------------CCC-------------cccCCHHHHhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----------------VSY-------------PFYSNVCELAA 219 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------------~~~-------------~~~~~l~e~l~ 219 (300)
=++|||||+|.||..||..+...|++|++||++++.. .+. ....++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 3579999999999999999999999999999875421 010 112345 6789
Q ss_pred cCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 220 NCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 220 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
+||+|+.++|.+.+...-+-+++.+.++++++|++.+.+- ....+.+.+... -...++..|.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~~-~~~ig~hf~~ 454 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTI--SISLLAKALKRP-ENFVGMHFFN 454 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSS--CHHHHGGGCSCG-GGEEEEECCS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCC--CHHHHHHHhcCc-cceEEEEccC
Confidence 9999999999888766555567778899999987544332 234555555321 1236677676
No 151
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.34 E-value=2.7e-07 Score=93.83 Aligned_cols=111 Identities=15% Similarity=0.070 Sum_probs=78.3
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----------------CC-------------CcccCCHHHHhhc
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----------------VS-------------YPFYSNVCELAAN 220 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------------~~-------------~~~~~~l~e~l~~ 220 (300)
++|+|||+|.||..+|..+...|++|++||++++.. .+ .....++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 589999999999999999999999999999875321 01 0122355 57899
Q ss_pred CCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 022233 221 CDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFE 284 (300)
Q Consensus 221 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~ 284 (300)
||+|+.++|...+.+.-+-+++.+.+++++++++.+.+- ....+.+.+... -...++..|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~p-~~~iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTI--DLNKIGERTKSQ-DRIVGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHTTTCSCT-TTEEEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCC--CHHHHHHHhcCC-CCEEEecCCC
Confidence 999999999887766555567778899999986544332 234455554322 1236667676
No 152
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.32 E-value=1.8e-06 Score=69.95 Aligned_cols=102 Identities=16% Similarity=0.156 Sum_probs=75.3
Q ss_pred CCCEEEEEec----ChhHHHHHHHHHhCCCEEEEECCC--CCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHH
Q 022233 168 GGKRVGIVGL----GSIGSLVAKRLDAFGCSISYNSRT--KKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQ 241 (300)
Q Consensus 168 ~g~~vgIiG~----G~IG~~~A~~l~~~g~~V~~~~~~--~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~ 241 (300)
+-++|+|||. |++|..+++.|+..|++|+-.++. .....+...+.+++|+-...|++++++|. +.+..++. +
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~-~ 89 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP-E 89 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH-H
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH-H
Confidence 4669999999 899999999999999987666665 33334556678899998899999999996 66666664 3
Q ss_pred HHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 242 VLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 242 ~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
..+. ..+.+|++.+.. ++++.+.+++.++.
T Consensus 90 ~~~~-gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 90 VLAL-RPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp HHHH-CCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred HHHc-CCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 3333 334676665432 57788888877665
No 153
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.31 E-value=2.7e-06 Score=69.21 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=75.7
Q ss_pred CCEEEEEec----ChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 169 GKRVGIVGL----GSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 169 g~~vgIiG~----G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
-++|+|||. |.+|..+++.|+..|++|+-.++......+...+.+++|+....|++++++|. +....++. +..+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~-~~~~ 99 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE-QAIK 99 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH-HHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH-HHHH
Confidence 679999999 79999999999999999776666543334556678899998899999999996 55555553 3333
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEE
Q 022233 245 ALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGA 278 (300)
Q Consensus 245 ~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a 278 (300)
. ..+.++++.+ . .++++.+++++.++.-.
T Consensus 100 ~-gi~~i~~~~g--~--~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 100 K-GAKVVWFQYN--T--YNREASKKADEAGLIIV 128 (144)
T ss_dssp H-TCSEEEECTT--C--CCHHHHHHHHHTTCEEE
T ss_pred c-CCCEEEECCC--c--hHHHHHHHHHHcCCEEE
Confidence 2 3346665543 2 37888888888777643
No 154
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.30 E-value=4.8e-07 Score=81.30 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=73.3
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
++++.|+|.|.+|++++..|...|.+|++++|+.++.. +.. ..+++++ .++|+|+.++|..-.....++.+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~-~~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l 195 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD-CFMEPPK-SAFDLIINATSASLHNELPLNKEVL 195 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE-EESSCCS-SCCSEEEECCTTCCCCSCSSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-EecHHHh-ccCCEEEEcccCCCCCCCCCChHHH
Confidence 88999999999999999999999999999999876532 111 1123332 3899999999976433234665533
Q ss_pred -hcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 244 -SALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 244 -~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
+.++++.+++|+...+ .+. |.++.++..+
T Consensus 196 ~~~l~~~~~v~D~vY~P--~T~-ll~~A~~~G~ 225 (269)
T 3phh_A 196 KGYFKEGKLAYDLAYGF--LTP-FLSLAKELKT 225 (269)
T ss_dssp HHHHHHCSEEEESCCSS--CCH-HHHHHHHTTC
T ss_pred HhhCCCCCEEEEeCCCC--chH-HHHHHHHCcC
Confidence 3678899999999986 555 5555555444
No 155
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.27 E-value=2.8e-07 Score=83.64 Aligned_cols=101 Identities=13% Similarity=0.230 Sum_probs=70.5
Q ss_pred CEEEEEecChhHHHHHHHHHhC-----C-CEEEEECCCCCC-----C-CCCccc-------------CCHHHHhhcCCEE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-----G-CSISYNSRTKKP-----S-VSYPFY-------------SNVCELAANCDIL 224 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-----g-~~V~~~~~~~~~-----~-~~~~~~-------------~~l~e~l~~aDvV 224 (300)
++|+|||+|.||..+|..|... | .+|++++| .+. . .+.... .+..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5899999999999999999988 9 99999998 321 1 121111 0234567899999
Q ss_pred EEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCC
Q 022233 225 IICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 225 ~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~ 274 (300)
++++|... ++.++ +.+.+.++++.++|++.-| +-.++.+.+.+.+.+
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDTV 134 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCc
Confidence 99999765 34444 4556667889999999776 222355656554433
No 156
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.27 E-value=7.6e-07 Score=84.45 Aligned_cols=90 Identities=22% Similarity=0.279 Sum_probs=70.2
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCC---C--------CCCCcccCCHHHHhhcCCEEEEecCCChhh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKK---P--------SVSYPFYSNVCELAANCDILIICCGLTAET 234 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~---~--------~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t 234 (300)
-|.||+|+|||+|.-|.+-|.+|+..|.+|.+--|... . ..+.. ..+..|+++.||+|++.+|+..+.
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~-v~~~~eA~~~ADvV~~L~PD~~q~ 112 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFK-VGTYEELIPQADLVINLTPDKQHS 112 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCE-EEEHHHHGGGCSEEEECSCGGGHH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCE-ecCHHHHHHhCCEEEEeCChhhHH
Confidence 38999999999999999999999999999976544111 0 12333 457999999999999999976554
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCCc
Q 022233 235 HHMINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg~ 259 (300)
. +. +++.+.||+|+.+. .|.|=
T Consensus 113 ~-vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 113 D-VV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp H-HH-HHHGGGSCTTCEEE-ESSCH
T ss_pred H-HH-HHHHhhCCCCCEEE-ecCcc
Confidence 4 33 57999999999876 55553
No 157
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.24 E-value=7.2e-08 Score=86.65 Aligned_cols=84 Identities=12% Similarity=0.039 Sum_probs=56.0
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEE-EEECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSI-SYNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V-~~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
++|||||+|+||+.+|+.|... ++| .+|+++++.. .+. ...+++++++++|+|++++|... .. +.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~~-----~v 74 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-IK-----TV 74 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-HH-----HH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-HH-----HH
Confidence 4799999999999999999877 888 5899875421 123 44567788889999999999654 22 33
Q ss_pred HhcC-CCCcEEEEcCCCccc
Q 022233 243 LSAL-GKEGVVINIGRGPII 261 (300)
Q Consensus 243 l~~m-k~ga~lIn~srg~~v 261 (300)
+..+ +++.++||++-+-..
T Consensus 75 ~~~l~~~~~ivi~~s~~~~~ 94 (276)
T 2i76_A 75 ANHLNLGDAVLVHCSGFLSS 94 (276)
T ss_dssp HTTTCCSSCCEEECCSSSCG
T ss_pred HHHhccCCCEEEECCCCCcH
Confidence 3334 688999999865443
No 158
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.23 E-value=4.3e-06 Score=76.54 Aligned_cols=104 Identities=20% Similarity=0.307 Sum_probs=75.8
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------------CC------CcccCCHHHHhhcCCEEEEecCCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------------VS------YPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------------~~------~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
++|+|||.|.||..+|..|...|.+|.+++|+.... .+ .....+++++.+.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~~ 82 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVV 82 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCCC
Confidence 589999999999999999999999999999875210 01 112246667666899999999966
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 232 AETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
.. +.++ +.+...+++++++|.+.-| +-.++.+.+.+...++.
T Consensus 83 ~~-~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 83 EG-ADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp TT-CCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred Ch-HHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 53 3333 5566778889999998776 33346777777655554
No 159
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.22 E-value=4.4e-06 Score=76.61 Aligned_cols=83 Identities=23% Similarity=0.282 Sum_probs=64.9
Q ss_pred CCEEEEEecChhHHHHHHHHHh-CCC-EEEEECCCCCCCC---------CC--cccCCHHHHhhcCCEEEEecCCChhhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDA-FGC-SISYNSRTKKPSV---------SY--PFYSNVCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~-~g~-~V~~~~~~~~~~~---------~~--~~~~~l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
.++++|||.|.||+.+++.+.. ++. +|.+|+|+ +... +. ... ++++++++||+|++|+|.. .
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~---~ 195 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST---T 195 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---S
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---C
Confidence 5799999999999999999885 454 79999999 3211 22 223 8999999999999999864 3
Q ss_pred hcchHHHHhcCCCCcEEEEcCCCc
Q 022233 236 HMINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg~ 259 (300)
.++. .+.+++|+++++++.-.
T Consensus 196 pvl~---~~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 196 PLFA---GQALRAGAFVGAIGSSL 216 (313)
T ss_dssp CSSC---GGGCCTTCEEEECCCSS
T ss_pred cccC---HHHcCCCcEEEECCCCC
Confidence 4554 24689999999998653
No 160
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.20 E-value=5.6e-06 Score=67.51 Aligned_cols=94 Identities=18% Similarity=0.126 Sum_probs=62.4
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CCCccc----CC---HHHH-hhcCCEEEEecC
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VSYPFY----SN---VCEL-AANCDILIICCG 229 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~~~~~----~~---l~e~-l~~aDvV~l~~p 229 (300)
.....+++|.|+|+|.||+.+|+.|+..|.+|+++++++... .+.... .+ +.++ +.++|+|++++|
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 455778999999999999999999999999999998875431 122111 12 3333 678999999998
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCCc
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg~ 259 (300)
....+. .-......+.+...+|-..++.
T Consensus 94 ~~~~~~--~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 94 DDSTNF--FISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp CHHHHH--HHHHHHHHTSCCSEEEEECSSG
T ss_pred CcHHHH--HHHHHHHHHCCCCeEEEEECCH
Confidence 654433 2233445445556666665655
No 161
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.18 E-value=6.8e-07 Score=74.89 Aligned_cols=91 Identities=14% Similarity=0.167 Sum_probs=64.0
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhC-CCEEEEECCCCCCC-----CCCcc----cCC---HHHH--hhcCCEEEEecC
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAF-GCSISYNSRTKKPS-----VSYPF----YSN---VCEL--AANCDILIICCG 229 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~-g~~V~~~~~~~~~~-----~~~~~----~~~---l~e~--l~~aDvV~l~~p 229 (300)
.++.+++|+|+|+|.||+.+|+.|+.. |++|.+++++++.. .+... ..+ +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 457788999999999999999999998 99999999876431 12211 112 3444 678999999999
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
..+.+..++ ..+..+.+...+|..+.
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 765554333 34556666666665443
No 162
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.16 E-value=8.8e-07 Score=82.99 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=74.7
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----C-------CcccCCHHHHhhcCCEEEEecCCChhh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----S-------YPFYSNVCELAANCDILIICCGLTAET 234 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----~-------~~~~~~l~e~l~~aDvV~l~~p~~~~t 234 (300)
+=++++|+|||+|.||+.+|+.|... .+|.+++|+.+... . .....+++++++++|+|++++|.....
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~ 91 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF 91 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH
Confidence 45688999999999999999999987 89999999865311 1 111346788999999999998854332
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 235 HHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
. + ..+.++.|..++|++-- .-+..+|.++.++.++.
T Consensus 92 ~--v---~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 92 K--S---IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp H--H---HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred H--H---HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 2 2 23456789999999853 34556777777777664
No 163
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.15 E-value=3.3e-06 Score=78.67 Aligned_cols=87 Identities=16% Similarity=0.192 Sum_probs=66.2
Q ss_pred CCCEEEEEecChhHHHHHHHHH-hCC-CEEEEECCCCCCCC----------C--CcccCCHHHHhhcCCEEEEecCCChh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLD-AFG-CSISYNSRTKKPSV----------S--YPFYSNVCELAANCDILIICCGLTAE 233 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~-~~g-~~V~~~~~~~~~~~----------~--~~~~~~l~e~l~~aDvV~l~~p~~~~ 233 (300)
..++|+|||.|.||+.+++.+. ..+ .+|.+|+|+++... + ...+.++++++++||+|++++|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 3679999999999999998875 345 48999999864310 2 2235689999999999999999762
Q ss_pred hhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 234 THHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
...++.. +.+++|..+++++..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 3345542 568999999999864
No 164
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.13 E-value=5.2e-06 Score=75.73 Aligned_cols=105 Identities=17% Similarity=0.238 Sum_probs=74.4
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC---CC--------------CcccCCHHHHhhcCCEEEEecCCCh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS---VS--------------YPFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~---~~--------------~~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
++|+|||.|.||..+|..|...|.+|.+++|+.... .+ .....+.++ +..+|+|++++|...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~~ 81 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTFA 81 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCCC
Confidence 589999999999999999999999999999875210 01 011234544 689999999999554
Q ss_pred hhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEE
Q 022233 233 ETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGA 278 (300)
Q Consensus 233 ~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a 278 (300)
++.++ +.+...+++++++|.+.-| +-.++.|.+.+...++.++
T Consensus 82 -~~~~l-~~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 82 -NSRYE-ELIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp -GGGHH-HHHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEEE
T ss_pred -cHHHH-HHHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEEE
Confidence 34333 5566778899999999877 2235667777765565443
No 165
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.12 E-value=2.5e-06 Score=80.36 Aligned_cols=83 Identities=22% Similarity=0.256 Sum_probs=70.2
Q ss_pred CCCEEEEEec-ChhHHHHHHHHHhCCC---EEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 168 GGKRVGIVGL-GSIGSLVAKRLDAFGC---SISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 168 ~g~~vgIiG~-G~IG~~~A~~l~~~g~---~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
...+|.|||. |..|+..++.+.++|. .|..+|++.... +.. . +.+.++|+||.++........+|+++.+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~-g~~----~-~~i~~aDivIn~vlig~~aP~Lvt~e~v 286 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR-GGP----F-DEIPQADIFINCIYLSKPIAPFTNMEKL 286 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT-CSC----C-THHHHSSEEEECCCCCSSCCCSCCHHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc-CCc----h-hhHhhCCEEEECcCcCCCCCcccCHHHH
Confidence 3668999999 9999999999999998 899999865221 222 1 3567999999999987777789999999
Q ss_pred hcC-CCCcEEEEcC
Q 022233 244 SAL-GKEGVVINIG 256 (300)
Q Consensus 244 ~~m-k~ga~lIn~s 256 (300)
+.| |||++|||+|
T Consensus 287 ~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 287 NNPNRRLRTVVDVS 300 (394)
T ss_dssp CCTTCCCCEEEETT
T ss_pred hcCcCCCeEEEEEe
Confidence 999 9999999997
No 166
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.12 E-value=1.2e-05 Score=75.30 Aligned_cols=92 Identities=13% Similarity=0.231 Sum_probs=75.1
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCC----CCCC---C------------CCcccCCHHHHhhcCCE
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRT----KKPS---V------------SYPFYSNVCELAANCDI 223 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~----~~~~---~------------~~~~~~~l~e~l~~aDv 223 (300)
|.++.+.+|.|+|.|.+|..+|+.|...|. +|+++|++ .... . ......+|+|+++++|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 446888999999999999999999999999 89999987 3221 0 11124579999999999
Q ss_pred EEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcc
Q 022233 224 LIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 224 V~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 260 (300)
++-+. . .++++++.++.|+++++++.+|+...
T Consensus 267 lIG~S---a--p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 267 FIGVS---R--GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp EEECS---C--SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred EEEeC---C--CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 88873 1 38899999999999999999997654
No 167
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.09 E-value=4.2e-06 Score=66.14 Aligned_cols=85 Identities=19% Similarity=0.285 Sum_probs=57.7
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CCCcc----cCCHH---HH-hhcCCEEEEecCCChhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VSYPF----YSNVC---EL-AANCDILIICCGLTAET 234 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~~~~----~~~l~---e~-l~~aDvV~l~~p~~~~t 234 (300)
+++|+|+|+|.+|+.+|+.|...|.+|.+++++++.. .+... ..+.+ +. +.++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 5799999999999999999999999999998865321 12211 11222 22 57899999999865433
Q ss_pred hhcchHHHHhcCCCCcEEEEc
Q 022233 235 HHMINKQVLSALGKEGVVINI 255 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~ 255 (300)
. .-......++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 223445567777666644
No 168
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.08 E-value=4.9e-06 Score=76.18 Aligned_cols=100 Identities=20% Similarity=0.319 Sum_probs=69.5
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CC-------------CcccCCHHHHhhcCCEEEEec
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VS-------------YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~-------------~~~~~~l~e~l~~aDvV~l~~ 228 (300)
...++|+|||.|.||..+|..|...|.+|.+| ++++.. .+ .....++++ +..+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 45779999999999999999999999999998 554211 01 111234544 68999999999
Q ss_pred CCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 022233 229 GLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLV 271 (300)
Q Consensus 229 p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 271 (300)
|.. .++.++ +++...+++++++|.+.-|= -.++.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHcC
Confidence 965 555544 45666788999999997773 22345556553
No 169
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.07 E-value=1.8e-06 Score=79.64 Aligned_cols=87 Identities=18% Similarity=0.278 Sum_probs=65.0
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC----CCCC-------------cccCCHHHHhhcCCEEEEecCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP----SVSY-------------PFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~----~~~~-------------~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
.++|+|||.|.||..+|..|...|.+|.+++|.... ..+. ....++++ +..+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 468999999999999999999999999999985211 0111 11246666 5899999999996
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
..++.++ +++...+++++++|.+.-|
T Consensus 81 ~~~~~~~-~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 PALESVA-AGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp HHHHHHH-GGGSSSCCTTCEEEECCSS
T ss_pred hhHHHHH-HHHHhhCCCCCEEEEECCC
Confidence 4555444 3344567889999999888
No 170
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.04 E-value=5.8e-06 Score=63.33 Aligned_cols=95 Identities=12% Similarity=0.132 Sum_probs=63.0
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCC-CEEEEECCCCCCC-----CCC-------cccCCHHHHhhcCCEEEEecCCChhh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFG-CSISYNSRTKKPS-----VSY-------PFYSNVCELAANCDILIICCGLTAET 234 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g-~~V~~~~~~~~~~-----~~~-------~~~~~l~e~l~~aDvV~l~~p~~~~t 234 (300)
.+++|+|+|.|.||+.+++.|...| ++|.+++|++... .+. ....++.++++++|+|+.++|....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~- 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT- 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH-
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh-
Confidence 3679999999999999999999999 8999999875421 111 1123456778899999999974432
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 022233 235 HHMINKQVLSALGKEGVVINIGRGPIIDEQELVR 268 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~ 268 (300)
..++. ...+.|...++.+ +.+-..+.+.+
T Consensus 83 ~~~~~----~~~~~g~~~~~~~-~~~~~~~~~~~ 111 (118)
T 3ic5_A 83 PIIAK----AAKAAGAHYFDLT-EDVAATNAVRA 111 (118)
T ss_dssp HHHHH----HHHHTTCEEECCC-SCHHHHHHHHH
T ss_pred HHHHH----HHHHhCCCEEEec-CcHHHHHHHHH
Confidence 22221 2235677778775 33333344433
No 171
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.04 E-value=3.1e-06 Score=68.01 Aligned_cols=86 Identities=15% Similarity=0.103 Sum_probs=59.3
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc----cC---CHHHH-hhcCCEEEEecCCChhhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF----YS---NVCEL-AANCDILIICCGLTAETH 235 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~----~~---~l~e~-l~~aDvV~l~~p~~~~t~ 235 (300)
..+|.|+|+|.+|+.+|+.|+..|++|++++++++.. .+... .. .++++ +.++|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 3489999999999999999999999999999876531 12211 11 12332 578999999999766554
Q ss_pred hcchHHHHhcCCCCcEEEEcC
Q 022233 236 HMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~s 256 (300)
.++ ..+..+.++..+|-..
T Consensus 87 ~~~--~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIARA 105 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEEE
T ss_pred HHH--HHHHHHCCCCeEEEEE
Confidence 332 3445555666666443
No 172
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.98 E-value=4.5e-06 Score=78.70 Aligned_cols=84 Identities=8% Similarity=0.095 Sum_probs=62.5
Q ss_pred CEEEEEecChhHHHHHHHHHh-CCCEEEEEC---CCCCC------CCC---------C----------cccCCHHHHhhc
Q 022233 170 KRVGIVGLGSIGSLVAKRLDA-FGCSISYNS---RTKKP------SVS---------Y----------PFYSNVCELAAN 220 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~-~g~~V~~~~---~~~~~------~~~---------~----------~~~~~l~e~l~~ 220 (300)
++|+|||.|.||..+|..|+. .|++|.+|+ ++++. ..+ . ....+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 589999999999999999987 599999999 53211 001 1 123468888999
Q ss_pred CCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEc
Q 022233 221 CDILIICCGLTAETHHMINKQVLSALGKEGVVINI 255 (300)
Q Consensus 221 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~ 255 (300)
+|+|++++|... .+.++ +++...+++++++|+.
T Consensus 83 aD~Vilav~~~~-~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFA-HEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHH-HHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999654 34333 4556678889999985
No 173
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.98 E-value=1.5e-05 Score=73.34 Aligned_cols=83 Identities=16% Similarity=0.238 Sum_probs=63.9
Q ss_pred CCCEEEEEecChhHHHHHHHHHh-CC-CEEEEECCCCCCCC-----------CCcccCCHHHHhhcCCEEEEecCCChhh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDA-FG-CSISYNSRTKKPSV-----------SYPFYSNVCELAANCDILIICCGLTAET 234 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~-~g-~~V~~~~~~~~~~~-----------~~~~~~~l~e~l~~aDvV~l~~p~~~~t 234 (300)
..++++|||.|.||+.+++.+.. .+ .+|.+|+|+++... ... +.++++++ ++|+|++++|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC--
Confidence 35699999999999999999886 44 47899999865321 123 57899999 9999999999643
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCC
Q 022233 235 HHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg 258 (300)
.++.. +.+++|..+++++.-
T Consensus 200 -pv~~~---~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 200 -PVVKA---EWVEEGTHINAIGAD 219 (322)
T ss_dssp -CCBCG---GGCCTTCEEEECSCC
T ss_pred -ceecH---HHcCCCeEEEECCCC
Confidence 44542 568999999999633
No 174
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.97 E-value=8.8e-06 Score=74.76 Aligned_cols=117 Identities=15% Similarity=0.063 Sum_probs=85.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC--------------------CC----------CcccCCHHHHh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS--------------------VS----------YPFYSNVCELA 218 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~--------------------~~----------~~~~~~l~e~l 218 (300)
-.+|+|||.|.||+.+|..+...|++|..+|++++.. .+ .....+++|++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 4589999999999999999999999999999875320 00 01245788999
Q ss_pred hcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 022233 219 ANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPD 288 (300)
Q Consensus 219 ~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~ 288 (300)
++||+|+=++|-+-+.+.-+-+++-+.++++++|-..+++ +.-..|.+.+.... ...++=-|.+-|.
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~p~-r~ig~HffNP~~~ 152 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAHVK-QCIVAHPVNPPYY 152 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTTGG-GEEEEEECSSTTT
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccCCC-cEEEecCCCCccc
Confidence 9999999999998888776777777888999887555444 34466666664432 2355555555443
No 175
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.97 E-value=3.3e-06 Score=76.29 Aligned_cols=104 Identities=17% Similarity=0.109 Sum_probs=73.0
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC------C---CcccCCHHHHhhcCCEEEEecCCChhhh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV------S---YPFYSNVCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~------~---~~~~~~l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.+... . .....+++++.+++|+|+.++|......
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGE 202 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC---
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCC
Confidence 4779999999999999999999999997 9999999864321 0 0112345565588999999999764322
Q ss_pred -hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCC
Q 022233 236 -HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 236 -~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~ 274 (300)
..+. .+.++++.+++|+.-.+ ..+. +.++.++..
T Consensus 203 ~~~l~---~~~l~~~~~V~DlvY~P-~~T~-ll~~A~~~G 237 (281)
T 3o8q_A 203 LPAID---PVIFSSRSVCYDMMYGK-GYTV-FNQWARQHG 237 (281)
T ss_dssp -CSCC---GGGEEEEEEEEESCCCS-SCCH-HHHHHHHTT
T ss_pred CCCCC---HHHhCcCCEEEEecCCC-ccCH-HHHHHHHCC
Confidence 1233 24578899999998775 4455 444445444
No 176
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.92 E-value=1.8e-05 Score=74.63 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=66.0
Q ss_pred EEEEEecChhHHHHHHHHHhCC--------CEEEEECCCCCCC------------------CC------CcccCCHHHHh
Q 022233 171 RVGIVGLGSIGSLVAKRLDAFG--------CSISYNSRTKKPS------------------VS------YPFYSNVCELA 218 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~g--------~~V~~~~~~~~~~------------------~~------~~~~~~l~e~l 218 (300)
+|+|||.|..|.++|..|...| .+|..|.|.++.. .+ .....++++++
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999998655 3588887754310 01 12345899999
Q ss_pred hcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCc
Q 022233 219 ANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 219 ~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~ 259 (300)
++||+|++++|. +..+.++ +++...++++..+|+++-|=
T Consensus 116 ~~ad~ii~avPs-~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIPH-QFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSCG-GGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECCh-hhhHHHH-HHhccccCCCceeEEecccc
Confidence 999999999994 4445444 45666788999999999884
No 177
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.92 E-value=1e-05 Score=74.01 Aligned_cols=100 Identities=12% Similarity=0.141 Sum_probs=67.4
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC---------------C--CcccCCHHHHhhcCCEEEEecCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV---------------S--YPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~---------------~--~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
.++|+|||.|.||..+|..|...|+ +|..+|++.+... . .....++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4699999999999999999998898 9999998764211 1 1112456 778999999999842
Q ss_pred Ch-----------hhhhc---chHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 022233 231 TA-----------ETHHM---INKQVLSALGKEGVVINIGRGPIIDEQELVRCL 270 (300)
Q Consensus 231 ~~-----------~t~~l---i~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL 270 (300)
.. ++..+ +-+++-+ ..+++++|+++-..-+....+.+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~-~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKK-YCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEeCChHHHHHHHHHHhh
Confidence 11 11111 1122223 3569999999876555555665554
No 178
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.92 E-value=5.4e-06 Score=74.34 Aligned_cols=105 Identities=14% Similarity=0.074 Sum_probs=69.6
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC------CC---cccCCHHHHhh-cCCEEEEecCCChhhh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV------SY---PFYSNVCELAA-NCDILIICCGLTAETH 235 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------~~---~~~~~l~e~l~-~aDvV~l~~p~~~~t~ 235 (300)
.+.+++++|+|.|.+|++++..|...|.+|++++|+.+... +. ....+++++.+ ++|+|+.++|......
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~ 195 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGG 195 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-----
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCCC
Confidence 36789999999999999999999999999999999854311 00 01123344434 8999999999764321
Q ss_pred -hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 236 -HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 236 -~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
.-++.+. ++++.+++|+...+..++.-+..+-+.|
T Consensus 196 ~~~i~~~~---l~~~~~v~D~~y~p~~~t~ll~~a~~~G 231 (272)
T 1p77_A 196 TASVDAEI---LKLGSAFYDMQYAKGTDTPFIALCKSLG 231 (272)
T ss_dssp --CCCHHH---HHHCSCEEESCCCTTSCCHHHHHHHHTT
T ss_pred CCCCCHHH---cCCCCEEEEeeCCCCcCCHHHHHHHHcC
Confidence 0133333 4578999999997655455444444444
No 179
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.90 E-value=9.1e-06 Score=64.38 Aligned_cols=91 Identities=16% Similarity=0.276 Sum_probs=58.4
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC-----CCCCcc----cCC---HHHH-hhcCCEEEEecCCChh
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP-----SVSYPF----YSN---VCEL-AANCDILIICCGLTAE 233 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~-----~~~~~~----~~~---l~e~-l~~aDvV~l~~p~~~~ 233 (300)
+.+++|+|+|+|.+|+.+++.|...|++|.++++++.. ..+... ..+ +.++ +.++|+|+++++...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 56788999999999999999999999999998876432 111111 112 2233 6789999999986533
Q ss_pred hhhcchHHHHhcCCCCcEEEEcCCCc
Q 022233 234 THHMINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn~srg~ 259 (300)
+.. .-......+.+. .+|-.+.+.
T Consensus 84 ~~~-~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 AST-LTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HHH-HHHHHHHHTTCS-EEEEECCSH
T ss_pred HHH-HHHHHHHHcCCC-eEEEEeCCH
Confidence 221 223344556666 555555544
No 180
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.89 E-value=1.6e-05 Score=72.13 Aligned_cols=102 Identities=18% Similarity=0.225 Sum_probs=70.7
Q ss_pred CCEEEEEecChhHHH-HHHHHHh-CCCEEE-EECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChhhhhcch
Q 022233 169 GKRVGIVGLGSIGSL-VAKRLDA-FGCSIS-YNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 169 g~~vgIiG~G~IG~~-~A~~l~~-~g~~V~-~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~ 239 (300)
..+|||||+|.||+. +++.++. -++++. +++++++.. .+...+.++++++++.|+|++++|.....+ +-
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~--~~ 83 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYE--II 83 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHH--HH
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHH--HH
Confidence 369999999999996 8888876 467876 788876532 133447899999999999999999665544 22
Q ss_pred HHHHhcCCCCc-EEEE-cCCCcccCHHHHHHHHHhCCc
Q 022233 240 KQVLSALGKEG-VVIN-IGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 240 ~~~l~~mk~ga-~lIn-~srg~~vd~~aL~~aL~~~~i 275 (300)
... ++.|. +++. ...-.+-+.++|.++.++.++
T Consensus 84 ~~a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~ 118 (308)
T 3uuw_A 84 KIL---LNLGVHVYVDKPLASTVSQGEELIELSTKKNL 118 (308)
T ss_dssp HHH---HHTTCEEEECSSSSSSHHHHHHHHHHHHHHTC
T ss_pred HHH---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCC
Confidence 223 33443 4544 334455667778888777554
No 181
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.88 E-value=4.1e-05 Score=69.34 Aligned_cols=79 Identities=23% Similarity=0.341 Sum_probs=64.3
Q ss_pred ccccCCCEEEEEecCh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 164 GSKLGGKRVGIVGLGS-IGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~-IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
+.++.||++.|||-++ +|+++|..|...|+.|+..... ..++.+..++||+|+.++.- .++|..+
T Consensus 174 ~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~---------T~dl~~~~~~ADIvV~A~G~----p~~i~~d- 239 (303)
T 4b4u_A 174 NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSR---------TQNLPELVKQADIIVGAVGK----AELIQKD- 239 (303)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHHTCSEEEECSCS----TTCBCGG-
T ss_pred CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCC---------CCCHHHHhhcCCeEEeccCC----CCccccc-
Confidence 5568999999999886 4999999999999999876543 24799999999999999753 3456544
Q ss_pred HhcCCCCcEEEEcCCC
Q 022233 243 LSALGKEGVVINIGRG 258 (300)
Q Consensus 243 l~~mk~ga~lIn~srg 258 (300)
..|+|+++||++--
T Consensus 240 --~vk~GavVIDVGin 253 (303)
T 4b4u_A 240 --WIKQGAVVVDAGFH 253 (303)
T ss_dssp --GSCTTCEEEECCCB
T ss_pred --cccCCCEEEEecee
Confidence 47999999999853
No 182
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.87 E-value=2.2e-05 Score=70.54 Aligned_cols=105 Identities=16% Similarity=0.125 Sum_probs=72.9
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC------CC--cccCCHHHHh-hcCCEEEEecCCChhh
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV------SY--PFYSNVCELA-ANCDILIICCGLTAET 234 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~------~~--~~~~~l~e~l-~~aDvV~l~~p~~~~t 234 (300)
.++.|+++.|+|.|.+|++++..|...|. +|++++|+.+... .. ....+++++- .++|+|+.++|..-..
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~ 195 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTA 195 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGT
T ss_pred CCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCC
Confidence 34789999999999999999999999996 9999999865321 10 1112344433 7899999999965332
Q ss_pred h-hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 235 H-HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 235 ~-~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
. ..+.. +.++++.+++|+.-.+ ..+.-|.+|-+.|
T Consensus 196 ~~~~i~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 231 (272)
T 3pwz_A 196 DLPPLPA---DVLGEAALAYELAYGK-GLTPFLRLAREQG 231 (272)
T ss_dssp CCCCCCG---GGGTTCSEEEESSCSC-CSCHHHHHHHHHS
T ss_pred CCCCCCH---HHhCcCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 1 12332 4578999999998774 4555444554444
No 183
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.86 E-value=5.6e-05 Score=68.79 Aligned_cols=102 Identities=23% Similarity=0.332 Sum_probs=70.6
Q ss_pred CEEEEEecChhHHH-HHHHHHhC-CCEEE-EECCCCCCCC------CCcccCCHHHHhhcCCEEEEecCCChhhhhcchH
Q 022233 170 KRVGIVGLGSIGSL-VAKRLDAF-GCSIS-YNSRTKKPSV------SYPFYSNVCELAANCDILIICCGLTAETHHMINK 240 (300)
Q Consensus 170 ~~vgIiG~G~IG~~-~A~~l~~~-g~~V~-~~~~~~~~~~------~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~ 240 (300)
.+|||||+|.||+. +++.+... ++++. ++++++.... +...+.+++++..++|+|++++|.....+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~---- 81 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDV---- 81 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHH----
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHH----
Confidence 58999999999997 88888754 67775 7888765421 333566787776789999999996654331
Q ss_pred HHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCce
Q 022233 241 QVLSALGKEG-VVINI-GRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 241 ~~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~~i~ 276 (300)
....++.|. +++.- ..-.+-+.++|.++.++.++.
T Consensus 82 -~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 82 -VSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp -HHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 223344564 66662 344556777888888877654
No 184
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.84 E-value=2e-05 Score=70.58 Aligned_cols=105 Identities=15% Similarity=0.092 Sum_probs=70.3
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC------CC---cccCCHHHHh-hcCCEEEEecCCChhhh
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV------SY---PFYSNVCELA-ANCDILIICCGLTAETH 235 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------~~---~~~~~l~e~l-~~aDvV~l~~p~~~~t~ 235 (300)
.+.|+++.|+|.|.||+++|+.|...|.+|++++|+.+... +. ....+++++. .++|+|+.++|......
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~ 195 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGD 195 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCC
Confidence 36789999999999999999999999999999999854211 10 0112333333 58999999999754311
Q ss_pred -hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 236 -HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 236 -~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.-+.. ..++++.+++|+...+ ..+. +.+..++..+
T Consensus 196 ~~~i~~---~~l~~~~~v~D~~y~p-~~t~-~~~~a~~~G~ 231 (271)
T 1nyt_A 196 IPAIPS---SLIHPGIYCYDMFYQK-GKTP-FLAWCEQRGS 231 (271)
T ss_dssp CCCCCG---GGCCTTCEEEESCCCS-SCCH-HHHHHHHTTC
T ss_pred CCCCCH---HHcCCCCEEEEeccCC-cCCH-HHHHHHHcCC
Confidence 01222 3367899999999875 3333 4444444433
No 185
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.83 E-value=2.8e-06 Score=76.88 Aligned_cols=91 Identities=18% Similarity=0.150 Sum_probs=64.5
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCC---cccCCHHHHh-hcCCEEEEecCCChhhhhcchH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSY---PFYSNVCELA-ANCDILIICCGLTAETHHMINK 240 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~---~~~~~l~e~l-~~aDvV~l~~p~~~~t~~li~~ 240 (300)
++|+|||.|.||..+|..|...|.+|.+++|+.+.. .+. ....+..+.+ ..+|+|++++|.. .++.++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 589999999999999999998899999999875321 111 0112334444 7899999999855 444444 3
Q ss_pred HHHhcCCCCcEEEEcCCCcccC
Q 022233 241 QVLSALGKEGVVINIGRGPIID 262 (300)
Q Consensus 241 ~~l~~mk~ga~lIn~srg~~vd 262 (300)
++...++++.++|.+.-|=-..
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCCG
T ss_pred HHHHhhCCCCEEEEeccCcccH
Confidence 4445567888999998775433
No 186
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.83 E-value=1.1e-05 Score=64.53 Aligned_cols=86 Identities=12% Similarity=0.119 Sum_probs=55.6
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc----cCC---HHHH-hhcCCEEEEecCCChhh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF----YSN---VCEL-AANCDILIICCGLTAET 234 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~----~~~---l~e~-l~~aDvV~l~~p~~~~t 234 (300)
.++++.|+|+|.+|+.+|+.|...|++|.+++++++.. .+... ..+ +.++ +.++|+|++++|..+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 45789999999999999999999999999999875421 12110 112 2222 46899999999843332
Q ss_pred hhcchHHHHhcCCCCcEEEEc
Q 022233 235 HHMINKQVLSALGKEGVVINI 255 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~ 255 (300)
. ........+....+++-+
T Consensus 85 ~--~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 85 L--KILKALRSVSDVYAIVRV 103 (141)
T ss_dssp H--HHHHHHHHHCCCCEEEEE
T ss_pred H--HHHHHHHHhCCceEEEEE
Confidence 2 333444445544444433
No 187
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.81 E-value=2.7e-05 Score=71.27 Aligned_cols=100 Identities=12% Similarity=0.188 Sum_probs=66.2
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCC------CCCcccCCHHHHhh--cCCEEEEecCCChhhhhcch
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPS------VSYPFYSNVCELAA--NCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~------~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li~ 239 (300)
.+|||||+|.||+.+++.+... ++++. ++|++++.. .+.. +.+++++++ +.|+|++++|.....+ +-
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~--~~ 80 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHAD--LI 80 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHH--HH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHH--HH
Confidence 4899999999999999999976 67876 688876431 1344 789999998 7999999999765544 21
Q ss_pred HHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCc
Q 022233 240 KQVLSALGKEG-VVINI-GRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 240 ~~~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~~i 275 (300)
... ++.|. +++.- ..-.+-+.++|.++.++.++
T Consensus 81 ~~a---l~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~ 115 (331)
T 4hkt_A 81 ERF---ARAGKAIFCEKPIDLDAERVRACLKVVSDTKA 115 (331)
T ss_dssp HHH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred HHH---HHcCCcEEEecCCCCCHHHHHHHHHHHHHcCC
Confidence 222 22332 33332 23334455556666555444
No 188
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.81 E-value=4.6e-05 Score=68.79 Aligned_cols=104 Identities=19% Similarity=0.189 Sum_probs=75.3
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC-------------CCcc--cCCHHHHhhcCCEEEEecC
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV-------------SYPF--YSNVCELAANCDILIICCG 229 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~-------------~~~~--~~~l~e~l~~aDvV~l~~p 229 (300)
.+.|+++.|+|.|.+|++++..|...|. +|.+++|+.+... .... ..++++.++++|+|+.++|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 4779999999999999999999999999 7999999865321 0111 2378888999999999999
Q ss_pred CChhhh--hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 230 LTAETH--HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 230 ~~~~t~--~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
..-... -.++ .+.++++.+++|+.-.+ ..+.-|.+|-+.|
T Consensus 204 ~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P-~~T~ll~~A~~~G 245 (283)
T 3jyo_A 204 MGMPAHPGTAFD---VSCLTKDHWVGDVVYMP-IETELLKAARALG 245 (283)
T ss_dssp TTSTTSCSCSSC---GGGCCTTCEEEECCCSS-SSCHHHHHHHHHT
T ss_pred CCCCCCCCCCCC---HHHhCCCCEEEEecCCC-CCCHHHHHHHHCc
Confidence 642211 1233 34578899999998765 3455555555555
No 189
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.79 E-value=2.4e-05 Score=72.04 Aligned_cols=101 Identities=13% Similarity=0.099 Sum_probs=66.1
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCC------CCCcccCCHHHHhh--cCCEEEEecCCChhhhhcch
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPS------VSYPFYSNVCELAA--NCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~------~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li~ 239 (300)
.+|||||+|.||+.+++.++.. ++++. ++++++... .+...+.+++++++ +.|+|++++|.....+..
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-- 82 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLI-- 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHH--
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHH--
Confidence 4899999999999999999876 67775 688875431 24455789999998 899999999976554422
Q ss_pred HHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCc
Q 022233 240 KQVLSALGKE-GVVINIG-RGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 240 ~~~l~~mk~g-a~lIn~s-rg~~vd~~aL~~aL~~~~i 275 (300)
...++ .| .+++.-- .-.+-+.++|.++.++.++
T Consensus 83 ~~al~---~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~ 117 (344)
T 3euw_A 83 TRAVE---RGIPALCEKPIDLDIEMVRACKEKIGDGAS 117 (344)
T ss_dssp HHHHH---TTCCEEECSCSCSCHHHHHHHHHHHGGGGG
T ss_pred HHHHH---cCCcEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 22222 23 2444322 2333445555555554433
No 190
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.77 E-value=3.9e-05 Score=70.98 Aligned_cols=66 Identities=17% Similarity=0.180 Sum_probs=52.2
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCC------CCCcccCCHHHHh--hcCCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPS------VSYPFYSNVCELA--ANCDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~------~~~~~~~~l~e~l--~~aDvV~l~~p~~~~t~ 235 (300)
.+|||||+|.||+.+++.++.. ++++. ++|+++... .+...+.++++++ .+.|+|++++|.....+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~ 81 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAE 81 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 4899999999999999999987 77865 778876432 1444578999999 56899999999765544
No 191
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.75 E-value=2.7e-05 Score=74.53 Aligned_cols=103 Identities=17% Similarity=0.155 Sum_probs=72.3
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC------------CCC-------------CcccCCHHHHhhcCC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP------------SVS-------------YPFYSNVCELAANCD 222 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~------------~~~-------------~~~~~~l~e~l~~aD 222 (300)
+-++|+|||+|-+|..+|..++..|++|+++|.+++. +.+ ..+..+.++.+++||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 3469999999999999999999999999999976532 001 112457788999999
Q ss_pred EEEEecCCChh------hhhcc--hHHHHhcCC---CCcEEEEcCCCcccCHHHHHHHH
Q 022233 223 ILIICCGLTAE------THHMI--NKQVLSALG---KEGVVINIGRGPIIDEQELVRCL 270 (300)
Q Consensus 223 vV~l~~p~~~~------t~~li--~~~~l~~mk---~ga~lIn~srg~~vd~~aL~~aL 270 (300)
++++|+|.... ...+. .+...+.|+ +|.++|.-|+-.+=-.+.+...+
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~ 158 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARA 158 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHH
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHH
Confidence 99999984211 11111 123334443 68899999998887666665443
No 192
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.75 E-value=0.00012 Score=67.06 Aligned_cols=64 Identities=16% Similarity=0.252 Sum_probs=49.9
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCCC------CCc-ccCCHHHHhh--cCCEEEEecCCChh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPSV------SYP-FYSNVCELAA--NCDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~~------~~~-~~~~l~e~l~--~aDvV~l~~p~~~~ 233 (300)
.+|||||+|.||+.+++.++.. ++++. ++++++.... +.. .+.+++++++ +.|+|++++|....
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDH 80 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGH
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 5899999999999999998865 45664 6788765432 232 4679999998 79999999996554
No 193
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.75 E-value=4.1e-05 Score=70.18 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=66.9
Q ss_pred CCEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCC------CCC-cccCCHHHHhh--cCCEEEEecCCChhhhhc
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPS------VSY-PFYSNVCELAA--NCDILIICCGLTAETHHM 237 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~------~~~-~~~~~l~e~l~--~aDvV~l~~p~~~~t~~l 237 (300)
..+|||||+|.||+.+++.++.. +++|. ++|+++... .+. ..+.+++++++ +.|+|++++|.....+..
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 84 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAA 84 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHH
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHH
Confidence 35899999999999999999985 66775 678876432 133 35689999998 799999999976543321
Q ss_pred chHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCc
Q 022233 238 INKQVLSALGKE-GVVINIG-RGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 238 i~~~~l~~mk~g-a~lIn~s-rg~~vd~~aL~~aL~~~~i 275 (300)
... ++.| .+++.-- .-.+-+.++|.++.++.++
T Consensus 85 --~~a---l~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~ 119 (330)
T 3e9m_A 85 --KLA---LSQGKPVLLEKPFTLNAAEAEELFAIAQEQGV 119 (330)
T ss_dssp --HHH---HHTTCCEEECSSCCSSHHHHHHHHHHHHHTTC
T ss_pred --HHH---HHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 222 2233 2444322 3344455566666655544
No 194
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.74 E-value=0.00012 Score=65.00 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=72.7
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEE-EEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhc
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSI-SYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSA 245 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V-~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~ 245 (300)
-+.++|+++|+|+||+.+++. . ++++ .+|+ ......+.....+++++++++|+|+=|.+ .+. +.+.....
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k~gelgv~a~~d~d~lla~pD~VVe~A~-~~a----v~e~~~~i 80 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RISKDIPGVVRLDEFQVPSDVSTVVECAS-PEA----VKEYSLQI 80 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SSCCCCSSSEECSSCCCCTTCCEEEECSC-HHH----HHHHHHHH
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-ccccccCceeeCCHHHHhhCCCEEEECCC-HHH----HHHHHHHH
Confidence 457899999999999999998 4 7876 4666 22111244445778999889999888763 222 33445677
Q ss_pred CCCCcEEEEcCCCcccCH---HHHHHHHHhCCce
Q 022233 246 LGKEGVVINIGRGPIIDE---QELVRCLVQGEIK 276 (300)
Q Consensus 246 mk~ga~lIn~srg~~vd~---~aL~~aL~~~~i~ 276 (300)
++.|.-+|-+|-|.+.|. +.|.++.++|+-.
T Consensus 81 L~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 81 LKNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp TTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred HHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 899999999999998887 5666666776543
No 195
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.73 E-value=8.8e-05 Score=68.37 Aligned_cols=64 Identities=14% Similarity=0.099 Sum_probs=50.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC---------------C--CcccCCHHHHhhcCCEEEEec--
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV---------------S--YPFYSNVCELAANCDILIICC-- 228 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~---------------~--~~~~~~l~e~l~~aDvV~l~~-- 228 (300)
.++|+|||.|.+|..+|..|...|+ +|..||++.+... . .....++++.+++||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 4699999999999999999998887 9999998764211 1 111357888899999999998
Q ss_pred CCCh
Q 022233 229 GLTA 232 (300)
Q Consensus 229 p~~~ 232 (300)
|..+
T Consensus 89 p~~~ 92 (331)
T 1pzg_A 89 TKVP 92 (331)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 6443
No 196
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.73 E-value=8.6e-05 Score=60.13 Aligned_cols=88 Identities=8% Similarity=0.009 Sum_probs=58.2
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC---------CCCCc-------ccCCHHHH-hhcCCEEEEecCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP---------SVSYP-------FYSNVCEL-AANCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~---------~~~~~-------~~~~l~e~-l~~aDvV~l~~p~~ 231 (300)
++++.|+|+|.+|+.+++.|...|++|++.++++.. ..+.. ....+.++ +.++|.|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 568999999999999999999999999999886310 11111 11234554 78999999999865
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
+.+. .-......+.+...+|...+.
T Consensus 83 ~~n~--~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 83 ADNA--FVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp HHHH--HHHHHHHHHTSSSCEEEECSS
T ss_pred HHHH--HHHHHHHHHCCCCEEEEEECC
Confidence 4433 334445555444444443333
No 197
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.73 E-value=3.7e-05 Score=71.11 Aligned_cols=65 Identities=15% Similarity=0.150 Sum_probs=51.9
Q ss_pred CCEEEEEecChhHHHHHHHHHhC--CCEEE-EECCCCCCC------CCCcccCCHHHHhh--cCCEEEEecCCChh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAF--GCSIS-YNSRTKKPS------VSYPFYSNVCELAA--NCDILIICCGLTAE 233 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~--g~~V~-~~~~~~~~~------~~~~~~~~l~e~l~--~aDvV~l~~p~~~~ 233 (300)
-.+|||||+|.||+..++.++.. ++++. ++|++++.. .+...+.+++++++ +.|+|++++|....
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGH
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHH
Confidence 35899999999999999999987 77865 788876432 14455789999997 79999999996644
No 198
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.72 E-value=1.6e-05 Score=72.42 Aligned_cols=62 Identities=24% Similarity=0.370 Sum_probs=48.0
Q ss_pred CEEEEEecChhHHHHHHHHHhCC--CEEEEECCCCCCCC---------------CCcc-cCCHHHHhhcCCEEEEecCCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFG--CSISYNSRTKKPSV---------------SYPF-YSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g--~~V~~~~~~~~~~~---------------~~~~-~~~l~e~l~~aDvV~l~~p~~ 231 (300)
++|+|||.|.||..+|..|...| .+|..+|++.+... .... ..++ +.+++||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999999888 68999998753210 0111 2456 7789999999999864
Q ss_pred h
Q 022233 232 A 232 (300)
Q Consensus 232 ~ 232 (300)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 4
No 199
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.71 E-value=4.7e-05 Score=69.50 Aligned_cols=101 Identities=18% Similarity=0.198 Sum_probs=64.8
Q ss_pred CEEEEEecChhHHHH-HHHHHhCCCEEE-EECCCCCCC------CCC-cccCCHHHHhh--cCCEEEEecCCChhhhhcc
Q 022233 170 KRVGIVGLGSIGSLV-AKRLDAFGCSIS-YNSRTKKPS------VSY-PFYSNVCELAA--NCDILIICCGLTAETHHMI 238 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~-A~~l~~~g~~V~-~~~~~~~~~------~~~-~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li 238 (300)
.+|||||+|.||+.+ ++.+...++++. ++++++... .+. ..+.+++++++ ++|+|++++|......
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~--- 77 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHRE--- 77 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHH---
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHH---
Confidence 379999999999998 877777778865 778875431 133 24678999987 4999999999554322
Q ss_pred hHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCc
Q 022233 239 NKQVLSALGKEG-VVINI-GRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 239 ~~~~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~~i 275 (300)
-....++.|. +++.- ....+-+.++|.++.++.++
T Consensus 78 --~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~ 114 (332)
T 2glx_A 78 --QTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGV 114 (332)
T ss_dssp --HHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCC
Confidence 1223344554 44442 22344445566666655443
No 200
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.70 E-value=8e-05 Score=69.94 Aligned_cols=92 Identities=14% Similarity=0.157 Sum_probs=74.4
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCC-----C-C-CCC-----------CcccCCHHHHhhcCCEE
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTK-----K-P-SVS-----------YPFYSNVCELAANCDIL 224 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~-----~-~-~~~-----------~~~~~~l~e~l~~aDvV 224 (300)
|..+...+|.|+|.|..|..+|+.+..+|. +|+.+|++. + . ... .....+|+|+++.+|++
T Consensus 183 g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~ 262 (398)
T 2a9f_A 183 KKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIF 262 (398)
T ss_dssp TCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSE
T ss_pred CCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEE
Confidence 456888899999999999999999999999 999998762 1 1 111 01135799999999988
Q ss_pred EEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcc
Q 022233 225 IICCGLTAETHHMINKQVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 225 ~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 260 (300)
+=.- ..+++.++.++.|+++++++.+|....
T Consensus 263 IG~S-----apgl~T~EmVk~Ma~~pIIfalsNPt~ 293 (398)
T 2a9f_A 263 IGVS-----APGVLKAEWISKMAARPVIFAMANPIP 293 (398)
T ss_dssp EECC-----STTCCCHHHHHTSCSSCEEEECCSSSC
T ss_pred EecC-----CCCCCCHHHHHhhCCCCEEEECCCCCc
Confidence 7762 258899999999999999999998764
No 201
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.70 E-value=0.0001 Score=70.34 Aligned_cols=106 Identities=16% Similarity=0.248 Sum_probs=78.0
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCC---EEEEEC----CC----CCCC----CCC-----c------ccCCHHHH
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGC---SISYNS----RT----KKPS----VSY-----P------FYSNVCEL 217 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~---~V~~~~----~~----~~~~----~~~-----~------~~~~l~e~ 217 (300)
|.++.++++.|+|.|..|+++++.|...|. +|+++| |+ .... ... . ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 445789999999999999999999999998 799888 76 2211 100 0 13468899
Q ss_pred hhcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCC
Q 022233 218 AANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 218 l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~ 274 (300)
++++|+|+.+.|..+ +++.++.++.|+++.++++++.. ..|.-+.+|.+.|.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP--~~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANP--VPEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSS--SCSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCC--CCcchHHHHHHcCC
Confidence 999999999988632 34555677889999999999543 34555555555554
No 202
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.70 E-value=5.9e-05 Score=68.84 Aligned_cols=64 Identities=13% Similarity=0.242 Sum_probs=49.0
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCC------CCC-cccCCHHHHh-hcCCEEEEecCCChh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPS------VSY-PFYSNVCELA-ANCDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~------~~~-~~~~~l~e~l-~~aDvV~l~~p~~~~ 233 (300)
.+|||||+|.||+.+++.+... ++++. +++++++.. .+. ..+.++++++ .+.|+|++++|....
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h 75 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLH 75 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHH
Confidence 3899999999999999999876 56764 788765421 122 3467899999 789999999995543
No 203
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.70 E-value=6.9e-05 Score=68.69 Aligned_cols=105 Identities=18% Similarity=0.160 Sum_probs=71.7
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCC---CCC----------CC----cccC---CHHHHhhcCCEE
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKK---PSV----------SY----PFYS---NVCELAANCDIL 224 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~---~~~----------~~----~~~~---~l~e~l~~aDvV 224 (300)
++.|+++.|+|.|.+|++++..|...|. +|.+++|+.+ ... +. ..+. ++.+.+.++|+|
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 4789999999999999999999999999 8999999832 110 10 1112 255678899999
Q ss_pred EEecCCCh--hhh-hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 225 IICCGLTA--ETH-HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 225 ~l~~p~~~--~t~-~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
|.++|..- ... ..+. ....++++.+++|+.-.+. .+.-|.+|-+.|
T Consensus 231 INaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P~-~T~ll~~A~~~G 279 (315)
T 3tnl_A 231 TNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKPT-KTRLLEIAEEQG 279 (315)
T ss_dssp EECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSSS-SCHHHHHHHHTT
T ss_pred EECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCCC-CCHHHHHHHHCC
Confidence 99999642 211 1121 2345788999999987663 444444444443
No 204
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.69 E-value=3.3e-05 Score=70.29 Aligned_cols=101 Identities=13% Similarity=0.224 Sum_probs=68.6
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEE-EEECCCCCCCC----CCcccCCHHHHhh--cCCEEEEecCCChhhhhcchHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSI-SYNSRTKKPSV----SYPFYSNVCELAA--NCDILIICCGLTAETHHMINKQ 241 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V-~~~~~~~~~~~----~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li~~~ 241 (300)
.+|||||+|.||+.+++.+... ++++ .++++++.... ....+.+++++++ ++|+|++++|...... +
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~--~--- 85 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAE--I--- 85 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHH--H---
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHH--H---
Confidence 4899999999999999999876 5665 47887654211 1334578999986 7999999999654433 1
Q ss_pred HHhcCCCCc-EEEE-cCCCcccCHHHHHHHHHhCCc
Q 022233 242 VLSALGKEG-VVIN-IGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 242 ~l~~mk~ga-~lIn-~srg~~vd~~aL~~aL~~~~i 275 (300)
....++.|. +++. ...-.+-+.++|.++.++.++
T Consensus 86 ~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~ 121 (315)
T 3c1a_A 86 TLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGV 121 (315)
T ss_dssp HHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCC
Confidence 223345564 5666 233345566778887776554
No 205
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.68 E-value=0.00017 Score=65.27 Aligned_cols=104 Identities=20% Similarity=0.289 Sum_probs=70.3
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEE-EECCCCC--CCCCCcccCCHHHHhh--cCCEEEEecCCChhhhhcchHHH
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSIS-YNSRTKK--PSVSYPFYSNVCELAA--NCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~-~~~~~~~--~~~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
..+|+|+|+ |+||+.+++.++..|+++. ..++... ...+...+.+++|+.+ ..|++++++|.... ...+ .+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~-~~~~-~ea 84 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFC-KDSI-LEA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGGH-HHHH-HHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHHH-HHHH-HHH
Confidence 468999999 9999999999998899854 4565421 2234556789999998 89999999995433 3333 222
Q ss_pred HhcCCCCcEEEEcCCCc-ccCHHHHHHHHHhCCce
Q 022233 243 LSALGKEGVVINIGRGP-IIDEQELVRCLVQGEIK 276 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~-~vd~~aL~~aL~~~~i~ 276 (300)
++. ... .+|..+.|- .-+.+.|.++.++..+.
T Consensus 85 ~~~-Gi~-~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 85 IDA-GIK-LIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp HHT-TCS-EEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 221 222 334455553 33556888888887664
No 206
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.66 E-value=0.00015 Score=63.99 Aligned_cols=82 Identities=17% Similarity=0.252 Sum_probs=57.2
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEE-EECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhcCCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSIS-YNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSALGK 248 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~-~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ 248 (300)
++|+|+|+|+||+.+++.+...+.++. +++++.....+...+.++++++ ++|+|+-..+. ..+. +.+. ++.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~DVvIDft~p-~a~~-----~~~~-l~~ 75 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GADVAIDFSNP-NLLF-----PLLD-EDF 75 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCSEEEECSCH-HHHH-----HHHT-SCC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCCEEEEeCCh-HHHH-----HHHH-Hhc
Confidence 589999999999999999997765765 4788765444566677888888 99998844421 1222 2233 777
Q ss_pred CcEEEEcCCCc
Q 022233 249 EGVVINIGRGP 259 (300)
Q Consensus 249 ga~lIn~srg~ 259 (300)
|.-+|....|-
T Consensus 76 g~~vVigTTG~ 86 (243)
T 3qy9_A 76 HLPLVVATTGE 86 (243)
T ss_dssp CCCEEECCCSS
T ss_pred CCceEeCCCCC
Confidence 77677666663
No 207
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.65 E-value=4.5e-05 Score=68.84 Aligned_cols=103 Identities=14% Similarity=0.256 Sum_probs=70.4
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC----CC--cccCCHHHHhhcCCEEEEecCCC--hhhh-
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV----SY--PFYSNVCELAANCDILIICCGLT--AETH- 235 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~----~~--~~~~~l~e~l~~aDvV~l~~p~~--~~t~- 235 (300)
++.|+++.|+|.|.+|++++..|...|. +|++++|+.+... .. ..+.++.+ + ++|+||.++|.. +...
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~ 196 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGE 196 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTC
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCcc
Confidence 4679999999999999999999999998 8999999864321 11 11223334 4 899999999974 2211
Q ss_pred hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 236 HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
-.++.+. ++++.+++|+.-.+. .+. |.++.++..+
T Consensus 197 ~pi~~~~---l~~~~~v~DlvY~P~-~T~-ll~~A~~~G~ 231 (282)
T 3fbt_A 197 SPVDKEV---VAKFSSAVDLIYNPV-ETL-FLKYARESGV 231 (282)
T ss_dssp CSSCHHH---HTTCSEEEESCCSSS-SCH-HHHHHHHTTC
T ss_pred CCCCHHH---cCCCCEEEEEeeCCC-CCH-HHHHHHHCcC
Confidence 1245444 468899999986653 344 4444444433
No 208
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.62 E-value=0.0001 Score=67.76 Aligned_cols=100 Identities=17% Similarity=0.309 Sum_probs=65.7
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCCC------CC-cccCCHHHHhh--cCCEEEEecCCChhhhhcc
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPSV------SY-PFYSNVCELAA--NCDILIICCGLTAETHHMI 238 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~~------~~-~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li 238 (300)
.+|||||+|.||+.+++.+... ++++. ++|+++.... +. ..+.+++++++ ++|+|++++|...... +
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~--~ 80 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSE--L 80 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHH--H
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHH--H
Confidence 4899999999999999999875 67775 6788754321 32 25689999998 7999999999655433 1
Q ss_pred hHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCC
Q 022233 239 NKQVLSALGKE-GVVINIG-RGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 239 ~~~~l~~mk~g-a~lIn~s-rg~~vd~~aL~~aL~~~~ 274 (300)
-... ++.| .+++.-- .-.+-+.++|.++.++.+
T Consensus 81 ~~~a---l~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g 115 (344)
T 3ezy_A 81 VIAC---AKAKKHVFCEKPLSLNLADVDRMIEETKKAD 115 (344)
T ss_dssp HHHH---HHTTCEEEEESCSCSCHHHHHHHHHHHHHHT
T ss_pred HHHH---HhcCCeEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 1222 3334 2444432 334445556666555443
No 209
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.62 E-value=6.7e-05 Score=68.87 Aligned_cols=102 Identities=17% Similarity=0.211 Sum_probs=67.1
Q ss_pred CEEEEEecChhHHHHHHHHH-hC-CCEE-EEECCCCCCC------CCC-cccCCHHHHhh--cCCEEEEecCCChhhhhc
Q 022233 170 KRVGIVGLGSIGSLVAKRLD-AF-GCSI-SYNSRTKKPS------VSY-PFYSNVCELAA--NCDILIICCGLTAETHHM 237 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~-~~-g~~V-~~~~~~~~~~------~~~-~~~~~l~e~l~--~aDvV~l~~p~~~~t~~l 237 (300)
.+|||||+|.||+.+++.++ .. ++++ .++++++... .+. ..+.+++++++ ++|+|++++|......
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-- 86 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPE-- 86 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHH--
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHH--
Confidence 58999999999999999988 53 6775 5678875431 133 34678999987 6999999998654433
Q ss_pred chHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhC-Cce
Q 022233 238 INKQVLSALGKEG-VVINI-GRGPIIDEQELVRCLVQG-EIK 276 (300)
Q Consensus 238 i~~~~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~-~i~ 276 (300)
.....++.|. +++.- ....+-+.++|.++.++. ++.
T Consensus 87 ---~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 87 ---MTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp ---HHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred ---HHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 2223345564 44431 122334455677777776 553
No 210
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.59 E-value=0.00022 Score=65.55 Aligned_cols=60 Identities=27% Similarity=0.305 Sum_probs=47.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC---------------C--CcccCCHHHHhhcCCEEEEecC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV---------------S--YPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~---------------~--~~~~~~l~e~l~~aDvV~l~~p 229 (300)
.++|+|||.|.||..+|..+...|+ +|..+|++.+... . .....++ +.+++||+|+++++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 3699999999999999999999898 9999999764311 1 1112456 78999999999983
No 211
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.59 E-value=8.2e-05 Score=69.06 Aligned_cols=66 Identities=17% Similarity=0.195 Sum_probs=51.9
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCC-----CCCCcccCCHHHHhh--cCCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKP-----SVSYPFYSNVCELAA--NCDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~-----~~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~ 235 (300)
.+|||||+|.||+..++.++.. +++|. ++|+++.. ..+...+.+++++++ +.|+|++++|.....+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKE 80 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHH
Confidence 5899999999999999999876 67875 67876543 124556789999998 7899999999755433
No 212
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.59 E-value=0.00016 Score=66.13 Aligned_cols=100 Identities=18% Similarity=0.227 Sum_probs=66.6
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEE-EEECCCCCCCC--CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhc
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSI-SYNSRTKKPSV--SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSA 245 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V-~~~~~~~~~~~--~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~ 245 (300)
.+|||||+|+||+.+++.+... ++++ .+++++..... +...+.++++++.++|+|++++|...... .....
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~~gv~~~~d~~~ll~~~DvViiatp~~~h~~-----~~~~a 78 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGSATDIP-----EQAPK 78 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCTTTHHH-----HHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhcCCCceeCCHHHHhcCCCEEEEcCCcHHHHH-----HHHHH
Confidence 4899999999999999999876 5675 46777643321 22234677888888999999998654322 23445
Q ss_pred CCCCcEEEEcCCCcc--cCH-HHHHHHHHhCC
Q 022233 246 LGKEGVVINIGRGPI--IDE-QELVRCLVQGE 274 (300)
Q Consensus 246 mk~ga~lIn~srg~~--vd~-~aL~~aL~~~~ 274 (300)
++.|.-+|...-..+ -+. +.|.++.+++.
T Consensus 79 l~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 79 FAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 666776666544332 233 45677766655
No 213
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.57 E-value=6.3e-05 Score=68.89 Aligned_cols=89 Identities=22% Similarity=0.360 Sum_probs=59.0
Q ss_pred CEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC--------------CCc-ccCCHHHHhhcCCEEEEecCCCh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV--------------SYP-FYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~--------------~~~-~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
++|+|||.|.||..+|..|...|. +|..+|++++... ... ...+ .+.+++||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 489999999999999999998888 9999998753211 001 1123 356899999999999643
Q ss_pred h---hh-hc------chHHHHhc---CCCCcEEEEcCCCc
Q 022233 233 E---TH-HM------INKQVLSA---LGKEGVVINIGRGP 259 (300)
Q Consensus 233 ~---t~-~l------i~~~~l~~---mk~ga~lIn~srg~ 259 (300)
. ++ .+ +-.+.++. ..+++++|+++-+.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~ 119 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPV 119 (319)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcH
Confidence 1 01 00 01222222 25788888885543
No 214
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.57 E-value=2.3e-05 Score=70.62 Aligned_cols=104 Identities=19% Similarity=0.204 Sum_probs=71.5
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCC----------c-----ccCCHHHHhhcCCEEEEecCC
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSY----------P-----FYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~----------~-----~~~~l~e~l~~aDvV~l~~p~ 230 (300)
++.|+++.|+|.|.||+++|+.|...| +|++++|+.+..... . ...++.+.+.++|+|+.++|.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 467899999999999999999999999 999999875421100 0 011224567789999999986
Q ss_pred Chhhh---hcc-hHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 231 TAETH---HMI-NKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 231 ~~~t~---~li-~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
..... ..+ + .+.++++.+++|++..+ ..+ .|.+..++.++
T Consensus 204 ~~~~~~~~~~~~~---~~~l~~~~~v~Dv~y~p-~~t-~ll~~a~~~G~ 247 (287)
T 1nvt_A 204 GMYPNIDVEPIVK---AEKLREDMVVMDLIYNP-LET-VLLKEAKKVNA 247 (287)
T ss_dssp TCTTCCSSCCSSC---STTCCSSSEEEECCCSS-SSC-HHHHHHHTTTC
T ss_pred CCCCCCCCCCCCC---HHHcCCCCEEEEeeeCC-ccC-HHHHHHHHCCC
Confidence 54211 012 2 35678999999999854 333 35555555444
No 215
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.57 E-value=4.8e-05 Score=65.37 Aligned_cols=85 Identities=9% Similarity=0.050 Sum_probs=56.3
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CCCc-------ccCCHHHH-hhcCCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VSYP-------FYSNVCEL-AANCDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~~~-------~~~~l~e~-l~~aDvV~l~~p~~~~t~ 235 (300)
++|.|+|+|.+|+.+|+.|...|.+|++++++++.. .+.. ....++++ +.+||+|++++|....+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 80 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNL 80 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHH
Confidence 479999999999999999999999999999876421 1111 11224444 678999999998655433
Q ss_pred hcchHHHHhcCCCCcEEEEcC
Q 022233 236 HMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~s 256 (300)
+-......+.+...+|-..
T Consensus 81 --~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 81 --FIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp --HHHHHHHHTSCCCEEEECC
T ss_pred --HHHHHHHHHcCCCeEEEEE
Confidence 3333444433344444433
No 216
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.56 E-value=9.7e-05 Score=68.35 Aligned_cols=102 Identities=14% Similarity=0.061 Sum_probs=64.7
Q ss_pred CCEEEEEecChhHH-HHHHHHHhC-CCEEE-EECCCCCCCC------CCcccCCHHHHhh--cCCEEEEecCCChhhhhc
Q 022233 169 GKRVGIVGLGSIGS-LVAKRLDAF-GCSIS-YNSRTKKPSV------SYPFYSNVCELAA--NCDILIICCGLTAETHHM 237 (300)
Q Consensus 169 g~~vgIiG~G~IG~-~~A~~l~~~-g~~V~-~~~~~~~~~~------~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~l 237 (300)
-.+|||||+|.||+ .+++.++.. +++|. +++++++... +...+.+++++++ +.|+|++++|.....+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~-- 104 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAE-- 104 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHH--
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHH--
Confidence 46899999999999 789999877 67775 6787654321 4444579999997 5899999999665433
Q ss_pred chHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCc
Q 022233 238 INKQVLSALGKE-GVVINIG-RGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 238 i~~~~l~~mk~g-a~lIn~s-rg~~vd~~aL~~aL~~~~i 275 (300)
+-... ++.| .+++.-- --.+-+.++|.++.++.++
T Consensus 105 ~~~~a---l~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~ 141 (350)
T 3rc1_A 105 WIDRA---LRAGKHVLAEKPLTTDRPQAERLFAVARERGL 141 (350)
T ss_dssp HHHHH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHH---HHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 21222 2233 2444321 2334455555555544433
No 217
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.54 E-value=0.00015 Score=57.16 Aligned_cols=100 Identities=22% Similarity=0.269 Sum_probs=73.6
Q ss_pred CEEEEEec----ChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhc
Q 022233 170 KRVGIVGL----GSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSA 245 (300)
Q Consensus 170 ~~vgIiG~----G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~ 245 (300)
++|+|||. |+.|..+.+.|+..|++|+-.++......+...+.++.|+-. -|++++++|. +.+..++. +..+
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v~-e~~~- 80 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEG-VDTVTLYINP-QNQLSEYN-YILS- 80 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTT-CCEEEECSCH-HHHGGGHH-HHHH-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCC-CCEEEEEeCH-HHHHHHHH-HHHh-
Confidence 58999998 569999999999999999988887665556666788888888 9999999984 44555553 3333
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHhCCceE
Q 022233 246 LGKEGVVINIGRGPIIDEQELVRCLVQGEIKG 277 (300)
Q Consensus 246 mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~ 277 (300)
+...++|++.+. .++++.+.+++..+.-
T Consensus 81 ~g~k~v~~~~G~----~~~e~~~~a~~~Girv 108 (122)
T 3ff4_A 81 LKPKRVIFNPGT----ENEELEEILSENGIEP 108 (122)
T ss_dssp HCCSEEEECTTC----CCHHHHHHHHHTTCEE
T ss_pred cCCCEEEECCCC----ChHHHHHHHHHcCCeE
Confidence 334467765432 3567778888877763
No 218
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.54 E-value=0.00016 Score=65.71 Aligned_cols=100 Identities=19% Similarity=0.215 Sum_probs=64.1
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCCC--CCc--ccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPSV--SYP--FYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~~--~~~--~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
.+|||||+|+||+.+++.++.. ++++. ++++++.... +.. .+.++.+. .++|+|++++|.....+ ...
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h~~-----~~~ 83 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQL-ESVDVALVCSPSREVER-----TAL 83 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGS-SSCCEEEECSCHHHHHH-----HHH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhC-CCCCEEEECCCchhhHH-----HHH
Confidence 5899999999999999999874 67876 6888765322 222 23455555 78999999998544332 223
Q ss_pred hcCCCCcEEEEcCC--C-cccCHHHHHHHHHhCCc
Q 022233 244 SALGKEGVVINIGR--G-PIIDEQELVRCLVQGEI 275 (300)
Q Consensus 244 ~~mk~ga~lIn~sr--g-~~vd~~aL~~aL~~~~i 275 (300)
..++.|.-+++..- + .+.+.+.|.++.++.++
T Consensus 84 ~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~ 118 (304)
T 3bio_A 84 EILKKGICTADSFDIHDGILALRRSLGDAAGKSGA 118 (304)
T ss_dssp HHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCC
Confidence 44566777776532 2 33455677777777554
No 219
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.54 E-value=0.00039 Score=62.83 Aligned_cols=104 Identities=22% Similarity=0.265 Sum_probs=70.5
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEE-EECCCC--CCCCCCcccCCHHHHhh--cCCEEEEecCCChhhhhcchHHH
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSIS-YNSRTK--KPSVSYPFYSNVCELAA--NCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~-~~~~~~--~~~~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
.++|+|+|+ |++|+.+++.++..|+++. ..++.. ....+...+.+++|+.+ ..|++++++|.. .+...+. +.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~-~~~~~~~-ea 84 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAP-AAADAAL-EA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCHH-HHHHHHH-HH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCHH-HHHHHHH-HH
Confidence 568999999 9999999999998899854 556554 11235556789999998 899999999843 3333333 22
Q ss_pred HhcCCCCcEEEEcCCCc-ccCHHHHHHHHHhCCce
Q 022233 243 LSALGKEGVVINIGRGP-IIDEQELVRCLVQGEIK 276 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~-~vd~~aL~~aL~~~~i~ 276 (300)
.+. ... .+|..+.|= ..+++.+.++.++..+.
T Consensus 85 ~~~-Gi~-~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 85 AHA-GIP-LIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp HHT-TCS-EEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 221 222 244555552 23566888888877664
No 220
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.53 E-value=0.00012 Score=66.76 Aligned_cols=102 Identities=11% Similarity=0.115 Sum_probs=65.5
Q ss_pred CEEEEEecChhHH-HHHHHHHhC-CCEEEEECCCCCCC------CCCcc-cCCHHHHh-hcCCEEEEecCCChhhhhcch
Q 022233 170 KRVGIVGLGSIGS-LVAKRLDAF-GCSISYNSRTKKPS------VSYPF-YSNVCELA-ANCDILIICCGLTAETHHMIN 239 (300)
Q Consensus 170 ~~vgIiG~G~IG~-~~A~~l~~~-g~~V~~~~~~~~~~------~~~~~-~~~l~e~l-~~aDvV~l~~p~~~~t~~li~ 239 (300)
.+|||||+|.||+ .+++.++.. ++++.+++++++.. .+... +.+..+++ .++|+|++++|.....+ +
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~--~- 79 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHST--L- 79 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHH--H-
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHH--H-
Confidence 4899999999999 499988765 67877888876431 12222 33444555 78999999999544322 1
Q ss_pred HHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCce
Q 022233 240 KQVLSALGKEG-VVINI-GRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 240 ~~~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~~i~ 276 (300)
....++.|. +++.- .--.+-+.++|.++.++.++.
T Consensus 80 --~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 80 --AAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp --HHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 223344453 66653 233445667788887776654
No 221
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.52 E-value=0.00033 Score=64.08 Aligned_cols=100 Identities=13% Similarity=0.122 Sum_probs=63.9
Q ss_pred CEEEEEecChhHH-HHHHHHHhCCCEE-EEECCCCCCCC-------CCcccCCHHHHhh--cCCEEEEecCCChhhhhcc
Q 022233 170 KRVGIVGLGSIGS-LVAKRLDAFGCSI-SYNSRTKKPSV-------SYPFYSNVCELAA--NCDILIICCGLTAETHHMI 238 (300)
Q Consensus 170 ~~vgIiG~G~IG~-~~A~~l~~~g~~V-~~~~~~~~~~~-------~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li 238 (300)
.+|||||+|.+|. .+++.++..|++| .++|+++.... +...+.+++++++ +.|+|++++|.....+.
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~-- 82 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAEL-- 82 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHHH--
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHHH--
Confidence 5899999999996 6788777678886 57888765431 2345689999997 58999999996544331
Q ss_pred hHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCC
Q 022233 239 NKQVLSALGKEG-VVINI-GRGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 239 ~~~~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~~ 274 (300)
....++.|. +++.- ..-.+-+.++|.++.++.+
T Consensus 83 ---~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g 117 (336)
T 2p2s_A 83 ---ALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETG 117 (336)
T ss_dssp ---HHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 222333443 44442 2223334445555554433
No 222
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.52 E-value=0.00029 Score=64.66 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=46.6
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC---------------C--CcccCCHHHHhhcCCEEEEec
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV---------------S--YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~---------------~--~~~~~~l~e~l~~aDvV~l~~ 228 (300)
.++|+|||.|.||..+|..+...|+ +|..+|.+.+... . .....++ +.+++||+|++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 3589999999999999999998888 8999998764211 1 1112466 7899999999998
No 223
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.50 E-value=0.00016 Score=65.74 Aligned_cols=107 Identities=15% Similarity=0.223 Sum_probs=66.1
Q ss_pred CEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC--------C------Ccc-cCCHHHHhhcCCEEEEecCCCh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV--------S------YPF-YSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~--------~------~~~-~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
++|+|||.|.||..+|..|...|. +|..+|++.+... . ... ..+ .+.+++||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 489999999999999999998898 9999998753110 0 011 123 367899999999995332
Q ss_pred h-----------hhhcchHH---HHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEE
Q 022233 233 E-----------THHMINKQ---VLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGA 278 (300)
Q Consensus 233 ~-----------t~~li~~~---~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a 278 (300)
. +-.++ ++ .+....+++++|+++-+.=+....+.+.....++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIF-RELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp --------CHHHHHHHH-HHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCcHHHHHHhHHHHH-HHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1 11111 11 2222368899999765543334444444444566444
No 224
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.50 E-value=6.1e-05 Score=68.52 Aligned_cols=101 Identities=20% Similarity=0.351 Sum_probs=64.1
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCccc---------CCH-HHHhhcCCEEEEecCCChhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFY---------SNV-CELAANCDILIICCGLTAET 234 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~---------~~l-~e~l~~aDvV~l~~p~~~~t 234 (300)
++|+|||.|.||..+|..|. .|.+|.+++|+.... .+.... .+. .+....+|+|+++++.. ++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 69999999999999999999 899999999875321 011100 001 24567899999999854 33
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 235 HHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
..++ +.++.+.++. +|.+.-|=- .++.|.+.+-..++.
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcEE
Confidence 4333 2333345666 888866632 233444444444443
No 225
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.48 E-value=0.00028 Score=64.23 Aligned_cols=60 Identities=23% Similarity=0.375 Sum_probs=46.5
Q ss_pred CEEEEEecChhHHHHHHHHHh--CCCEEEEECCCCCCCC---------------C--CcccCCHHHHhhcCCEEEEecCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDA--FGCSISYNSRTKKPSV---------------S--YPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~--~g~~V~~~~~~~~~~~---------------~--~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
++|+|||.|.||..+|..|.. +|.+|..+|++++... . .....++++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 489999999999999999987 5789999999764211 0 011245666 8999999999974
No 226
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.47 E-value=0.00015 Score=67.50 Aligned_cols=102 Identities=14% Similarity=0.093 Sum_probs=63.9
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----C-------CCcccCCHHHHhhcCCEEEEecCCChhhh
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----V-------SYPFYSNVCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~-------~~~~~~~l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
=+.++|+|+|.|.+|+.+|+.|+. ..+|.+.+++.+.. . .+....++.++++++|+|+.++|..-...
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~ 92 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFK 92 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHH
T ss_pred CCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccch
Confidence 345689999999999999999976 47888887764321 0 12223457788999999999998542211
Q ss_pred hcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 236 HMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
+-+ ..++.|.-+||++ ...-+..+|.+..++.++
T Consensus 93 --v~~---~~~~~g~~yvD~s-~~~~~~~~l~~~a~~~g~ 126 (365)
T 3abi_A 93 --SIK---AAIKSKVDMVDVS-FMPENPLELRDEAEKAQV 126 (365)
T ss_dssp --HHH---HHHHHTCEEEECC-CCSSCGGGGHHHHHHTTC
T ss_pred --HHH---HHHhcCcceEeee-ccchhhhhhhhhhccCCc
Confidence 212 2345566777775 233334444444444433
No 227
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.46 E-value=0.00018 Score=66.80 Aligned_cols=66 Identities=14% Similarity=0.268 Sum_probs=50.0
Q ss_pred CEEEEEecChhHHH-HHHHHHhC-CCEEE-EECCCCCCC----CCCcccCCHHHHhh--cCCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSL-VAKRLDAF-GCSIS-YNSRTKKPS----VSYPFYSNVCELAA--NCDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~-~A~~l~~~-g~~V~-~~~~~~~~~----~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~ 235 (300)
.+|||||+|.||+. .++.++.. +++|. +++++++.. .+...+.+++++++ +.|+|++++|.....+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~ 82 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAP 82 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 48999999999997 77777765 67875 678775431 13445689999998 7899999999755433
No 228
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.46 E-value=0.0002 Score=66.31 Aligned_cols=67 Identities=24% Similarity=0.354 Sum_probs=51.6
Q ss_pred CCEEEEEecChhHHHHHHHHH-h-CCCEEE-EECCCCCCCC------C--CcccCCHHHHhh--cCCEEEEecCCChhhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLD-A-FGCSIS-YNSRTKKPSV------S--YPFYSNVCELAA--NCDILIICCGLTAETH 235 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~-~-~g~~V~-~~~~~~~~~~------~--~~~~~~l~e~l~--~aDvV~l~~p~~~~t~ 235 (300)
..+|||||+|.||+..++.+. . -++++. ++|+++.... + ...+.+++++++ +.|+|++++|.....+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 102 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHAD 102 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHH
Confidence 458999999999999999998 4 367765 6888765421 3 445789999998 4899999999665433
No 229
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.43 E-value=0.00012 Score=67.26 Aligned_cols=66 Identities=23% Similarity=0.357 Sum_probs=50.9
Q ss_pred CEEEEEecChhHHHHHHHHH-h-CCCEEE-EECCCCCCC------CC--CcccCCHHHHhhc--CCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLD-A-FGCSIS-YNSRTKKPS------VS--YPFYSNVCELAAN--CDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~-~-~g~~V~-~~~~~~~~~------~~--~~~~~~l~e~l~~--aDvV~l~~p~~~~t~ 235 (300)
.+|||||+|.||+..++.++ . -++++. ++|+++... .+ ...+.++++++++ .|+|++++|.....+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHES 81 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHH
Confidence 48999999999999999998 5 367765 678875431 13 3457899999986 899999999665433
No 230
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.40 E-value=0.00035 Score=60.83 Aligned_cols=89 Identities=18% Similarity=0.197 Sum_probs=59.6
Q ss_pred ccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-------CCccc-CC-HHHHhhcCCEEEEecCC
Q 022233 160 SLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-------SYPFY-SN-VCELAANCDILIICCGL 230 (300)
Q Consensus 160 ~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-------~~~~~-~~-l~e~l~~aDvV~l~~p~ 230 (300)
|+ .-++.|++|.|||.|.+|..-++.|...|.+|+++++...+.. ..... .. .++.+.++|+|+.++.
T Consensus 24 Pi--fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~- 100 (223)
T 3dfz_A 24 TV--MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN- 100 (223)
T ss_dssp EE--EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-
T ss_pred cc--EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-
Confidence 66 6789999999999999999999999999999999987643210 11100 11 1345788999887754
Q ss_pred ChhhhhcchHHHHhcCCCCcEEEEcC
Q 022233 231 TAETHHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 231 ~~~t~~li~~~~l~~mk~ga~lIn~s 256 (300)
.++.. .......+ -.++||+.
T Consensus 101 d~~~N----~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 101 DQAVN----KFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp CTHHH----HHHHHHSC-TTCEEEC-
T ss_pred CHHHH----HHHHHHHh-CCCEEEEe
Confidence 44433 33333344 44667764
No 231
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.39 E-value=0.00062 Score=62.00 Aligned_cols=107 Identities=17% Similarity=0.234 Sum_probs=73.9
Q ss_pred ccCCCEEEEE-ec-ChhHHHHHHHHHhCCCEEE-EECCCCC--CCCCCcccCCHHHHhh--cCCEEEEecCCChhhhhcc
Q 022233 166 KLGGKRVGIV-GL-GSIGSLVAKRLDAFGCSIS-YNSRTKK--PSVSYPFYSNVCELAA--NCDILIICCGLTAETHHMI 238 (300)
Q Consensus 166 ~l~g~~vgIi-G~-G~IG~~~A~~l~~~g~~V~-~~~~~~~--~~~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li 238 (300)
-+..++++|| |+ |++|+.+++.++..|++++ ..++... ...+...+.+++|+.+ ..|++++++|.. .....+
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~~-~~~~~~ 88 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPP-FAAAAI 88 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCHH-HHHHHH
Confidence 3667899999 99 9999999999999999854 4555431 2235566779999998 899999999953 333333
Q ss_pred hHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHhC-Cce
Q 022233 239 NKQVLSALGKEGVVINIGRGPI-IDEQELVRCLVQG-EIK 276 (300)
Q Consensus 239 ~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~aL~~~-~i~ 276 (300)
.+ ..+. .- ..+|+.+-|-. -++..+.+.+++. .+.
T Consensus 89 ~e-~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 89 NE-AIDA-EV-PLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp HH-HHHT-TC-SEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred HH-HHHC-CC-CEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 32 2221 11 24466777643 3455889988887 664
No 232
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.39 E-value=0.00034 Score=63.38 Aligned_cols=109 Identities=20% Similarity=0.234 Sum_probs=71.9
Q ss_pred CEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC---------------CC--cccCCHHHHhhcCCEEEEecCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV---------------SY--PFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~---------------~~--~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
++|+|||.|.+|.++|..|...|. +|..+|++++... .. ....+ .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 589999999999999999998887 8999998764210 11 11235 7899999999999754
Q ss_pred Ch---hhh-hcc--hH-------HHHhcCCCCcEEEEcCCCcccCHHHHHHHHH----hCCceEEE--ee
Q 022233 231 TA---ETH-HMI--NK-------QVLSALGKEGVVINIGRGPIIDEQELVRCLV----QGEIKGAG--LD 281 (300)
Q Consensus 231 ~~---~t~-~li--~~-------~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~----~~~i~~a~--LD 281 (300)
.. .++ .++ |. +.+....|.+++++++ .++|.-..+-.-. ..++.|.+ ||
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 31 111 111 11 1234457899999998 6777655443222 24666664 55
No 233
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.37 E-value=0.00038 Score=62.31 Aligned_cols=101 Identities=15% Similarity=0.272 Sum_probs=68.7
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC------CCcccCCHHHHhhcCCEEEEecCCChhh----hh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV------SYPFYSNVCELAANCDILIICCGLTAET----HH 236 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~------~~~~~~~l~e~l~~aDvV~l~~p~~~~t----~~ 236 (300)
.++++.|||.|.+|++++..|...|. +|++++|+.+... +.....++. +.++|+|+.++|..-.. ..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 36799999999999999999999998 7999999864321 111111222 46899999999975421 11
Q ss_pred -cchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 237 -MINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 237 -li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
.+..+. ++++.+++|+.-.+ ..+ .|.+..++.++
T Consensus 196 ~~~~~~~---l~~~~~v~DlvY~P-~~T-~ll~~A~~~G~ 230 (271)
T 1npy_A 196 LAFPKAF---IDNASVAFDVVAMP-VET-PFIRYAQARGK 230 (271)
T ss_dssp CSSCHHH---HHHCSEEEECCCSS-SSC-HHHHHHHHTTC
T ss_pred CCCCHHH---cCCCCEEEEeecCC-CCC-HHHHHHHHCCC
Confidence 134333 45688999999855 344 55555555544
No 234
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.35 E-value=0.0002 Score=65.10 Aligned_cols=89 Identities=16% Similarity=0.298 Sum_probs=58.8
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC--------CC------cc-c-CCHHHHhhcCCEEEEecCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV--------SY------PF-Y-SNVCELAANCDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~--------~~------~~-~-~~l~e~l~~aDvV~l~~p~ 230 (300)
.++|+|||.|.||..+|..|...|. +|.+++++.+... +. .. . .+ .+.+++||+|+++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITAGP 85 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEECCCC
Confidence 4699999999999999999999898 9999998752210 10 00 1 13 3567899999999953
Q ss_pred Chh---hh--------hc---chHHHHhcCCCCcEEEEcCCCc
Q 022233 231 TAE---TH--------HM---INKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 231 ~~~---t~--------~l---i~~~~l~~mk~ga~lIn~srg~ 259 (300)
... ++ .+ +-+.+.+ ..+++++|+++-|-
T Consensus 86 ~~~~g~~r~~~~~~n~~~~~~~~~~i~~-~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 86 RQKPGQSRLELVGATVNILKAIMPNLVK-VAPNAIYMLITNPV 127 (319)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEecCch
Confidence 211 10 01 1122222 36788999986654
No 235
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.34 E-value=0.00027 Score=64.67 Aligned_cols=101 Identities=18% Similarity=0.152 Sum_probs=63.9
Q ss_pred CEEEEEecChhHHHHHHHHHhCC---CEE-EEECCCCCCCC------CC-cccCCHHHHhh--cCCEEEEecCCChhhhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFG---CSI-SYNSRTKKPSV------SY-PFYSNVCELAA--NCDILIICCGLTAETHH 236 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g---~~V-~~~~~~~~~~~------~~-~~~~~l~e~l~--~aDvV~l~~p~~~~t~~ 236 (300)
.++||||+|.||+..++.++..+ +++ .+++++..... +. ..+.+++++++ +.|+|++++|.....+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~- 81 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKA- 81 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHH-
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH-
Confidence 48999999999999999998664 455 46788754321 33 35689999998 5899999999665433
Q ss_pred cchHHHHhcCCCC-cEEEEc-CCCcccCHHHHHHHHHhCCc
Q 022233 237 MINKQVLSALGKE-GVVINI-GRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 237 li~~~~l~~mk~g-a~lIn~-srg~~vd~~aL~~aL~~~~i 275 (300)
+-... ++.| .+++.- ---.+-+.++|.++.++.++
T Consensus 82 -~~~~a---l~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~ 118 (334)
T 3ohs_X 82 -AVMLC---LAAGKAVLCEKPMGVNAAEVREMVTEARSRGL 118 (334)
T ss_dssp -HHHHH---HHTTCEEEEESSSSSSHHHHHHHHHHHHHTTC
T ss_pred -HHHHH---HhcCCEEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 21222 2333 244442 12334455556665555443
No 236
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.33 E-value=0.00041 Score=63.43 Aligned_cols=104 Identities=19% Similarity=0.203 Sum_probs=71.7
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCC---CC----------CC----cccCCH---HHHhhcCCEE
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKP---SV----------SY----PFYSNV---CELAANCDIL 224 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~---~~----------~~----~~~~~l---~e~l~~aDvV 224 (300)
++.|+++.|+|.|.+|++++..|...|. +|.+++|+.+. .. +. ....++ .+.+.++|+|
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 4779999999999999999999999998 89999998321 10 11 112344 5678899999
Q ss_pred EEecCCCh--hhhhcc--hHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 225 IICCGLTA--ETHHMI--NKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 225 ~l~~p~~~--~t~~li--~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
|.++|..- .....+ + .+.++++.+++|+.-.+. .+.-|.+|-+.|
T Consensus 225 INaTp~Gm~~~~~~~~~~~---~~~l~~~~~v~D~vY~P~-~T~ll~~A~~~G 273 (312)
T 3t4e_A 225 TNGTKVGMKPLENESLIGD---VSLLRPELLVTECVYNPH-MTKLLQQAQQAG 273 (312)
T ss_dssp EECSSTTSTTSTTCCSCCC---GGGSCTTCEEEECCCSSS-SCHHHHHHHHTT
T ss_pred EECCcCCCCCCCCCcccCC---HHHcCCCCEEEEeccCCC-CCHHHHHHHHCC
Confidence 99999752 111111 2 245678999999987663 444444444444
No 237
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.33 E-value=0.00026 Score=65.17 Aligned_cols=66 Identities=15% Similarity=0.274 Sum_probs=47.4
Q ss_pred CEEEEEecChhHHH-HHH-HHHh-CCCEEE-EECCCCCCCC------CCcccCCHHHHhhc--CCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSL-VAK-RLDA-FGCSIS-YNSRTKKPSV------SYPFYSNVCELAAN--CDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~-~A~-~l~~-~g~~V~-~~~~~~~~~~------~~~~~~~l~e~l~~--aDvV~l~~p~~~~t~ 235 (300)
.+|||||+|.||+. .+. .+.. -+++|. ++|+++.... +...+.++++++++ .|+|++++|.....+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFE 80 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 48999999999996 455 3343 467775 7888764321 33456799999986 899999999665433
No 238
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.33 E-value=0.00035 Score=63.60 Aligned_cols=87 Identities=11% Similarity=0.183 Sum_probs=56.7
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC-----------CCcccCCHHHHhhcCCEEEEecCCCh---
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV-----------SYPFYSNVCELAANCDILIICCGLTA--- 232 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~-----------~~~~~~~l~e~l~~aDvV~l~~p~~~--- 232 (300)
.++|+|||.|.||..+|..+...|. +|..+|.+.+... ......++ +.+++||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 4799999999999999999988787 8999998764210 11122466 67899999999973211
Q ss_pred -------hhhhcc---hHHHHhcCCCCcEEEEcCC
Q 022233 233 -------ETHHMI---NKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 233 -------~t~~li---~~~~l~~mk~ga~lIn~sr 257 (300)
.+..++ -+++-+ ..|.+++|+++-
T Consensus 93 tR~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~sN 126 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALVPALGH-YSQHSVLLVASQ 126 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEECSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcCC
Confidence 111111 122222 248899999876
No 239
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.00019 Score=69.21 Aligned_cols=105 Identities=21% Similarity=0.164 Sum_probs=65.3
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhC-CCEEEEECCCCCCC------CCCc-------ccCCHHHHhhcCCEEEEecC
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAF-GCSISYNSRTKKPS------VSYP-------FYSNVCELAANCDILIICCG 229 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~-g~~V~~~~~~~~~~------~~~~-------~~~~l~e~l~~aDvV~l~~p 229 (300)
+..+.+++|+|+|.|.+|+.+++.|... |.+|.+++|+.... .+.. ...++.++++++|+|+.++|
T Consensus 18 ~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp 97 (467)
T 2axq_A 18 EGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIP 97 (467)
T ss_dssp -----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred ccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence 4568899999999999999999999987 78999999875321 0111 11245677899999999998
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCC
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~ 274 (300)
...... +.. ..++.|..+++++--. -+...|.++.++.+
T Consensus 98 ~~~~~~--v~~---a~l~~g~~vvd~~~~~-p~~~~Ll~~Ak~aG 136 (467)
T 2axq_A 98 YTFHPN--VVK---SAIRTKTDVVTSSYIS-PALRELEPEIVKAG 136 (467)
T ss_dssp GGGHHH--HHH---HHHHHTCEEEECSCCC-HHHHHHHHHHHHHT
T ss_pred hhhhHH--HHH---HHHhcCCEEEEeecCC-HHHHHHHHHHHHcC
Confidence 653211 222 2244567777775311 12345555544433
No 240
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.30 E-value=0.00013 Score=69.28 Aligned_cols=87 Identities=17% Similarity=0.153 Sum_probs=60.7
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCc-------ccCCHHHH-hhcCCEEEEecCCChhhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYP-------FYSNVCEL-AANCDILIICCGLTAETH 235 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~-------~~~~l~e~-l~~aDvV~l~~p~~~~t~ 235 (300)
+++|.|+|+|++|+.+|+.|...|..|++.+++++.. .+.. ....|+++ +.+||+|+++++....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 4579999999999999999999999999999876431 1211 11234444 688999999998655444
Q ss_pred hcchHHHHhcCCCCcEEEEcCC
Q 022233 236 HMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~sr 257 (300)
.-......+.+...+|--++
T Consensus 84 --~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 84 --QLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp --HHHHHHHHHCTTCEEEEEES
T ss_pred --HHHHHHHHhCCCCeEEEEEC
Confidence 33445566667755555444
No 241
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.28 E-value=0.00052 Score=63.49 Aligned_cols=102 Identities=14% Similarity=0.180 Sum_probs=69.3
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEE-EEECCCCCCC------CC----CcccCCHHHHhh--cCCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSI-SYNSRTKKPS------VS----YPFYSNVCELAA--NCDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V-~~~~~~~~~~------~~----~~~~~~l~e~l~--~aDvV~l~~p~~~~t~ 235 (300)
.+|||||+|.||+.+++.+... ++++ .+++++++.. .+ ...+.+++++++ +.|+|++++|......
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 86 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVE 86 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 4899999999999999998875 5676 4678765421 12 234678999997 5899999998554332
Q ss_pred hcchHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCce
Q 022233 236 HMINKQVLSALGKEG-VVINI-GRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 236 ~li~~~~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~~i~ 276 (300)
-....++.|. +++.- -.-.+-+.++|.++.++.++.
T Consensus 87 -----~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 87 -----WAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp -----HHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred -----HHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 2233455665 44442 223445667888888877664
No 242
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.28 E-value=0.00026 Score=65.70 Aligned_cols=65 Identities=17% Similarity=0.219 Sum_probs=49.1
Q ss_pred CCEEEEEecChhHHH-HHHHHHhC-CCEEE-EECCCCCCC------C-CCcccCCHHHHhhcC--CEEEEecCCChh
Q 022233 169 GKRVGIVGLGSIGSL-VAKRLDAF-GCSIS-YNSRTKKPS------V-SYPFYSNVCELAANC--DILIICCGLTAE 233 (300)
Q Consensus 169 g~~vgIiG~G~IG~~-~A~~l~~~-g~~V~-~~~~~~~~~------~-~~~~~~~l~e~l~~a--DvV~l~~p~~~~ 233 (300)
..+|||||+|.||+. +++.++.. ++++. ++|+++... . ....+.++++++++. |+|++++|....
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 81 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLH 81 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 358999999999995 88988876 67775 788875421 1 234568999999865 999999985443
No 243
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.28 E-value=0.00071 Score=62.35 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=50.3
Q ss_pred CEEEEEecChhHHH-HHHHHHhC-CCEEE-EECCCCCCC----CCCcccCCHHHHhhc--CCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSL-VAKRLDAF-GCSIS-YNSRTKKPS----VSYPFYSNVCELAAN--CDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~-~A~~l~~~-g~~V~-~~~~~~~~~----~~~~~~~~l~e~l~~--aDvV~l~~p~~~~t~ 235 (300)
.+|||||+|.||+. .++.++.. +++|. +++++++.. .+...+.++++++++ .|+|++++|.....+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 82 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFP 82 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 58999999999997 78888766 67775 678765421 134457899999986 899999999765533
No 244
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.22 E-value=0.00066 Score=68.98 Aligned_cols=115 Identities=12% Similarity=0.140 Sum_probs=82.6
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC--------------------C------CcccCCHHHHhhcCCE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV--------------------S------YPFYSNVCELAANCDI 223 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------------~------~~~~~~l~e~l~~aDv 223 (300)
++|||||.|.||+.+|..+...|++|+.+|.+++... . .....+-.+.+++||+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDl 396 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 396 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSE
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCE
Confidence 6999999999999999999999999999998754200 0 0011222345889999
Q ss_pred EEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 022233 224 LIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEP 287 (300)
Q Consensus 224 V~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP 287 (300)
|+=++|-+-+.+.-+-+++-+.++++++|-...++ +.-..|.+.++.. =..+++=-|.+-|
T Consensus 397 VIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~~p-~r~ig~HFfnP~~ 457 (742)
T 3zwc_A 397 VVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDRP-QLVIGTHFFSPAH 457 (742)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSCG-GGEEEEECCSSTT
T ss_pred EEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcCCc-cccccccccCCCC
Confidence 99999999888877777777889999987655444 3445566665433 2346777676544
No 245
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.20 E-value=0.00057 Score=63.87 Aligned_cols=62 Identities=27% Similarity=0.418 Sum_probs=47.4
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-C-C-----cccC---CHHHHhhcCCEEEEe
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-S-Y-----PFYS---NVCELAANCDILIIC 227 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-~-~-----~~~~---~l~e~l~~aDvV~l~ 227 (300)
-+.|++|+|+|.|.+|+.+++.++.+|++|+++|+++.... . . ..+. .+.++++++|+|+..
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 37899999999999999999999999999999887654211 1 0 0112 366788999998653
No 246
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.19 E-value=0.0009 Score=61.20 Aligned_cols=110 Identities=19% Similarity=0.318 Sum_probs=66.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCCC-------C-------cccCCHHHHhhcCCEEEEecCCCh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSVS-------Y-------PFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~~-------~-------~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
.++|+|||.|.+|.++|..+...|. +|..+|.+.+...+ . ....+-.+.+++||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4689999999999999999998887 89999987643221 0 011123567999999999987532
Q ss_pred hhhhc-----c--h----HH---HHhcCCCCcEEEEcCCCcccCHHHHHH--H--HHhCCceEE--Eee
Q 022233 233 ETHHM-----I--N----KQ---VLSALGKEGVVINIGRGPIIDEQELVR--C--LVQGEIKGA--GLD 281 (300)
Q Consensus 233 ~t~~l-----i--~----~~---~l~~mk~ga~lIn~srg~~vd~~aL~~--a--L~~~~i~~a--~LD 281 (300)
. .+. + + .+ .+....|++++|++ ..++|.-..+- . +...++.|. .||
T Consensus 87 k-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld 152 (318)
T 1y6j_A 87 K-PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV--SNPVDIITYMIQKWSGLPVGKVIGSGTVLD 152 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC--SSSHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred C-CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe--cCcHHHHHHHHHHHcCCCHHHEeccCCchH
Confidence 1 111 0 1 11 12223689999997 45565544332 2 233466665 256
No 247
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.17 E-value=0.00039 Score=63.51 Aligned_cols=96 Identities=18% Similarity=0.332 Sum_probs=61.7
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC----------C-----CcccCCHHHHhhcCCEEEEecCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV----------S-----YPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~----------~-----~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
.++|+|||.|.||.++|..++..|. +|..+|++.+... . .....+..+.+++||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3699999999999999999987665 8999998753211 0 001123456799999999997754
Q ss_pred hh-----------hhhcchHHH---HhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 232 AE-----------THHMINKQV---LSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 232 ~~-----------t~~li~~~~---l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
.. +-.++ .++ +....|.+++++++ .++|.-+.+
T Consensus 86 ~~~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~~iv~t--NPv~~~~~~ 132 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIF-RSIVESVMASGFQGLFLVAT--NPVDILTYA 132 (316)
T ss_dssp CCTTTCSGGGHHHHHHHH-HHHHHHHHHHTCCSEEEECS--SSHHHHHHH
T ss_pred CCCCCCHHHHHHcChHHH-HHHHHHHHHHCCCCEEEEeC--CchHHHHHH
Confidence 21 00111 112 22235788899974 466654433
No 248
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.17 E-value=0.00049 Score=59.44 Aligned_cols=92 Identities=16% Similarity=-0.002 Sum_probs=62.1
Q ss_pred cCCCEEEEEe-cChhHHHHHHHHHhCC-CEEEEECCCCCCCC-----C-------CcccCCHHHHhhcCCEEEEecCCCh
Q 022233 167 LGGKRVGIVG-LGSIGSLVAKRLDAFG-CSISYNSRTKKPSV-----S-------YPFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 167 l~g~~vgIiG-~G~IG~~~A~~l~~~g-~~V~~~~~~~~~~~-----~-------~~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
...|+|.|.| .|.||+.+++.|...| ++|.+.+|++.... . .....+++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 3467999999 6999999999999999 89999888754321 1 1112356678899999998876433
Q ss_pred hhhhcchHHHHhcCCC--CcEEEEcCCCcc
Q 022233 233 ETHHMINKQVLSALGK--EGVVINIGRGPI 260 (300)
Q Consensus 233 ~t~~li~~~~l~~mk~--ga~lIn~srg~~ 260 (300)
... ....++..|++ ...||++|....
T Consensus 101 ~~~--~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LDI--QANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HHH--HHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hhH--HHHHHHHHHHHcCCCEEEEEeccee
Confidence 221 22344454432 246888887543
No 249
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.16 E-value=0.00067 Score=62.03 Aligned_cols=96 Identities=17% Similarity=0.266 Sum_probs=63.9
Q ss_pred CEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC---------------CCccc-CCHHHHhhcCCEEEEecCCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV---------------SYPFY-SNVCELAANCDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~---------------~~~~~-~~l~e~l~~aDvV~l~~p~~ 231 (300)
++|+|||.|.||.++|..+...|+ +|..+|+++.... ..... .+..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 589999999999999999987776 8999998764311 01111 24568899999999997643
Q ss_pred hh---hh-hcc--hH-------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 232 AE---TH-HMI--NK-------QVLSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 232 ~~---t~-~li--~~-------~~l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
.. ++ .++ |. +.+....|.+++++++ .++|.-..+
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~t~~ 127 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA--NPLDVMTYV 127 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC--SSHHHHHHH
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC--CchhHHHHH
Confidence 11 11 111 11 1233446889999997 556655544
No 250
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.16 E-value=0.0011 Score=61.26 Aligned_cols=64 Identities=16% Similarity=0.227 Sum_probs=49.3
Q ss_pred CEEEEEecChhHHH-HHHHHHhC-CCEEE-EECCCCCCC---C-CCcccCCHHHHhhc--CCEEEEecCCChh
Q 022233 170 KRVGIVGLGSIGSL-VAKRLDAF-GCSIS-YNSRTKKPS---V-SYPFYSNVCELAAN--CDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G~IG~~-~A~~l~~~-g~~V~-~~~~~~~~~---~-~~~~~~~l~e~l~~--aDvV~l~~p~~~~ 233 (300)
.+|||||+|.||+. .+..++.. +++|. +++++++.. . +...+.++++++++ .|+|++++|....
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 78 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTH 78 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGH
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHH
Confidence 48999999999997 77777766 67775 678775432 1 33456899999987 8999999996544
No 251
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.16 E-value=0.0011 Score=59.80 Aligned_cols=100 Identities=19% Similarity=0.161 Sum_probs=64.0
Q ss_pred CEEEEEecChhHHHHHHHHHh----CCCEEE-EECCCCCCC-CCCcccCCHHHHhh--cCCEEEEecCCChhhhhcchHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDA----FGCSIS-YNSRTKKPS-VSYPFYSNVCELAA--NCDILIICCGLTAETHHMINKQ 241 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~----~g~~V~-~~~~~~~~~-~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li~~~ 241 (300)
.+|||||+|.||+..++.+.. -++++. +++++.... .+.. +.+++++++ +.|+|++++|.....+ +-.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~--~~~- 83 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVR-QISLEDALRSQEIDVAYICSESSSHED--YIR- 83 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHH--HHH-
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHHHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHH--HHH-
Confidence 489999999999999988864 356665 667653221 1222 478999997 6799999999654433 222
Q ss_pred HHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCc
Q 022233 242 VLSALGKEG-VVINI-GRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 242 ~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~~i 275 (300)
..++.|. +++.- -.-.+-+.++|.++.++.++
T Consensus 84 --~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 117 (294)
T 1lc0_A 84 --QFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGR 117 (294)
T ss_dssp --HHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTC
T ss_pred --HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 3334443 66663 22234455777777765544
No 252
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.15 E-value=0.0017 Score=55.17 Aligned_cols=87 Identities=15% Similarity=0.211 Sum_probs=59.9
Q ss_pred CEEEEEe-cChhHHHHHHHHH-hCCCEEEEECCCCC-CC-------CC-------CcccCCHHHHhhcCCEEEEecCCCh
Q 022233 170 KRVGIVG-LGSIGSLVAKRLD-AFGCSISYNSRTKK-PS-------VS-------YPFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~-~~g~~V~~~~~~~~-~~-------~~-------~~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
|+|.|.| .|.||+.+++.|. ..|++|.+.+|++. .. .. .....+++++++++|+|+.+.....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 5799999 5999999999999 89999999988755 21 11 1112356678899999999886532
Q ss_pred hhhhcchHHHHhcCCC-C-cEEEEcCCCcc
Q 022233 233 ETHHMINKQVLSALGK-E-GVVINIGRGPI 260 (300)
Q Consensus 233 ~t~~li~~~~l~~mk~-g-a~lIn~srg~~ 260 (300)
- . ...+++.|++ + ..||++|....
T Consensus 86 ~-~---~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 86 S-D---MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp H-H---HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred h-h---HHHHHHHHHhcCCCeEEEEeecee
Confidence 1 1 3445555542 2 36788775543
No 253
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.14 E-value=0.00026 Score=61.33 Aligned_cols=84 Identities=10% Similarity=0.033 Sum_probs=56.9
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCc-------ccCCHHHH-hhcCCEEEEecCCChhhhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYP-------FYSNVCEL-AANCDILIICCGLTAETHH 236 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~-------~~~~l~e~-l~~aDvV~l~~p~~~~t~~ 236 (300)
.+++.|+|+|.+|+.+|+.|...|+ |++.+++++.. .+.. ....++++ +.++|.|++++|....+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~- 86 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI- 86 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHH-
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHH-
Confidence 5689999999999999999999999 99999875421 1111 11234444 788999999998654433
Q ss_pred cchHHHHhcCCCC-cEEEEc
Q 022233 237 MINKQVLSALGKE-GVVINI 255 (300)
Q Consensus 237 li~~~~l~~mk~g-a~lIn~ 255 (300)
.-......+.++ .+++.+
T Consensus 87 -~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 87 -HCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp -HHHHHHHHHCSSSEEEEEC
T ss_pred -HHHHHHHHHCCCCeEEEEE
Confidence 334455556666 444444
No 254
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.13 E-value=0.002 Score=62.15 Aligned_cols=98 Identities=16% Similarity=0.207 Sum_probs=70.8
Q ss_pred ccCCCEEEEEecC----------hhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhh
Q 022233 166 KLGGKRVGIVGLG----------SIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 166 ~l~g~~vgIiG~G----------~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
.+.|++|+|+|+- .=...+++.|...|.+|.+||+............++++++++||+|++++.-. +-+
T Consensus 350 ~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~~-~f~ 428 (478)
T 3g79_A 350 KMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVVLAGHS-AYS 428 (478)
T ss_dssp CSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCBTTBCEESCHHHHHTTCSEEEECSCCH-HHH
T ss_pred CCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccccCcceecCHHHHHhcCCEEEEecCCH-HHH
Confidence 4689999999974 33688999999999999999997653222333568999999999999998643 333
Q ss_pred hcchHHHHhcCC-CCcEEEEcCCCcccCHHHH
Q 022233 236 HMINKQVLSALG-KEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 236 ~li~~~~l~~mk-~ga~lIn~srg~~vd~~aL 266 (300)
.+=-..+.+.|+ ++.+++|+ |+- .|.+.+
T Consensus 429 ~~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 429 SLKADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp SCCHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred hhhHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 332244556677 47899995 665 454443
No 255
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.13 E-value=0.011 Score=53.71 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=72.5
Q ss_pred cCCCEEEEEecC--hhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEec
Q 022233 167 LGGKRVGIVGLG--SIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 167 l~g~~vgIiG~G--~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~ 228 (300)
+.|.+|+++|=| ++.++.+..+..+|++|.+..+..-... + .....+++|+++++|+|..-.
T Consensus 146 l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~ 225 (307)
T 2i6u_A 146 LRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDT 225 (307)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred cCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecc
Confidence 679999999996 9999999999999999988876432111 1 223578999999999999843
Q ss_pred CC-------Chh-----hhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 229 GL-------TAE-----THHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 229 p~-------~~~-----t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
=. .++ ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 226 w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 276 (307)
T 2i6u_A 226 WTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDA 276 (307)
T ss_dssp SSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred eecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccCHh
Confidence 20 000 12346889999999999999986 56544443
No 256
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.12 E-value=0.00043 Score=61.11 Aligned_cols=79 Identities=20% Similarity=0.333 Sum_probs=57.6
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCC-------------------CC-----------CCCc--c-
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKK-------------------PS-----------VSYP--F- 210 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~-------------------~~-----------~~~~--~- 210 (300)
..|.+++|.|||+|.+|..+|+.|...|. +|+++|+..- +. .... .
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 35889999999999999999999999998 8888887641 00 0000 0
Q ss_pred ---c--CCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 211 ---Y--SNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 211 ---~--~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
. .+++++++++|+|+.+++ +.+++.+++....+
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFA 144 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHH
T ss_pred eccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHH
Confidence 1 134567889999999886 56677777665544
No 257
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.12 E-value=0.0077 Score=54.62 Aligned_cols=98 Identities=19% Similarity=0.147 Sum_probs=73.7
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-------CCcccCCHHHHhhcCCEEEEecCCC------h
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-------SYPFYSNVCELAANCDILIICCGLT------A 232 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-------~~~~~~~l~e~l~~aDvV~l~~p~~------~ 232 (300)
+.|.+|+++|= +++.++.+..+..+|++|.+..+..-... ......+++|+++++|+|..-.=.. .
T Consensus 152 l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~ 231 (301)
T 2ef0_A 152 LAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAER 231 (301)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------
T ss_pred cCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccch
Confidence 67999999998 89999999999999999988876432211 1344678999999999998843211 0
Q ss_pred h------hhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 233 E------THHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 233 ~------t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
. ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 232 ~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 232 EKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEE 272 (301)
T ss_dssp CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred hHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHH
Confidence 1 12346889999999999999997 67655554
No 258
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.11 E-value=0.00083 Score=60.08 Aligned_cols=107 Identities=20% Similarity=0.204 Sum_probs=76.3
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC----------CCcccCCHHHHhhcCCEEEEecCCChh-
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV----------SYPFYSNVCELAANCDILIICCGLTAE- 233 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~----------~~~~~~~l~e~l~~aDvV~l~~p~~~~- 233 (300)
++.++++.|+|.|-.+++++-.|...|. +|.+++|+.++.. .........+.++++|+|+.++|..-.
T Consensus 122 ~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~ 201 (269)
T 3tum_A 122 EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGT 201 (269)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCST
T ss_pred CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccCC
Confidence 4678999999999999999999999997 7999999865421 111111222346789999999996532
Q ss_pred -hhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 022233 234 -THHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQG 273 (300)
Q Consensus 234 -t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~ 273 (300)
..--++...++.++++.++.|+--.+ ..+.-|..|-+.|
T Consensus 202 ~~~~p~~~~~~~~l~~~~~v~D~vY~P-~~T~ll~~A~~~G 241 (269)
T 3tum_A 202 RAELPLSAALLATLQPDTLVADVVTSP-EITPLLNRARQVG 241 (269)
T ss_dssp TCCCSSCHHHHHTCCTTSEEEECCCSS-SSCHHHHHHHHHT
T ss_pred CCCCCCChHHHhccCCCcEEEEEccCC-CCCHHHHHHHHCc
Confidence 22235777888899999999998765 3455555554444
No 259
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.10 E-value=0.0014 Score=59.56 Aligned_cols=92 Identities=21% Similarity=0.291 Sum_probs=60.6
Q ss_pred CEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC---------------CC--cccCCHHHHhhcCCEEEEecCCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV---------------SY--PFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~---------------~~--~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
++|+|||.|.||..+|..+...|. +|..+|.+.+... .. ....+. +.+++||+|+++++..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 589999999999999999998886 8999998753210 11 112456 7799999999998532
Q ss_pred hh-----------hhhcchHHH---HhcCCCCcEEEEcCCCcccCHHH
Q 022233 232 AE-----------THHMINKQV---LSALGKEGVVINIGRGPIIDEQE 265 (300)
Q Consensus 232 ~~-----------t~~li~~~~---l~~mk~ga~lIn~srg~~vd~~a 265 (300)
.. +..++ .+. +....|.+++++++ .++|.-.
T Consensus 82 ~~~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~vi~~t--NPv~~~t 126 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADIT-RACISQAAPLSPNAVIIMVN--NPLDAMT 126 (309)
T ss_dssp -------CHHHHHHHHHH-HHHHHHHGGGCTTCEEEECC--SSHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEcC--CchHHHH
Confidence 11 11111 122 23335889999974 4565544
No 260
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.09 E-value=0.00053 Score=65.75 Aligned_cols=101 Identities=17% Similarity=0.181 Sum_probs=67.2
Q ss_pred CCCEEEEEecChh--HHHHHHHHHh----CCCEEEEECCCCCCCC--------------CCcccCCHHHHhhcCCEEEEe
Q 022233 168 GGKRVGIVGLGSI--GSLVAKRLDA----FGCSISYNSRTKKPSV--------------SYPFYSNVCELAANCDILIIC 227 (300)
Q Consensus 168 ~g~~vgIiG~G~I--G~~~A~~l~~----~g~~V~~~~~~~~~~~--------------~~~~~~~l~e~l~~aDvV~l~ 227 (300)
.+++|+|||.|.+ |..++..+.. .| +|..||+.+.... ......++++++++||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 3569999999998 5788887764 46 9999998753210 112346889999999999999
Q ss_pred cCCC-----------hhhhhcch---------------------H---HHHhcCCCCcEEEEcCCCcccCHHHHHHH
Q 022233 228 CGLT-----------AETHHMIN---------------------K---QVLSALGKEGVVINIGRGPIIDEQELVRC 269 (300)
Q Consensus 228 ~p~~-----------~~t~~li~---------------------~---~~l~~mk~ga~lIn~srg~~vd~~aL~~a 269 (300)
++.. |...++.. . +.+....|.+++||++-.--+-+.++.+.
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~ 159 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKV 159 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHH
Confidence 9743 22222210 1 12233468999999987665545555444
No 261
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.07 E-value=0.00045 Score=59.79 Aligned_cols=63 Identities=13% Similarity=0.110 Sum_probs=43.2
Q ss_pred CEEEEEecChhHHHHHHH--HHhCCCEEE-EECCCCCCCC----C--CcccCCHHHHhhcCCEEEEecCCCh
Q 022233 170 KRVGIVGLGSIGSLVAKR--LDAFGCSIS-YNSRTKKPSV----S--YPFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~--l~~~g~~V~-~~~~~~~~~~----~--~~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
++++|||.|++|+.+++. ....|+++. ++|.++.... + .....++++++++.|++++++|...
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~~ 157 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAVA 157 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCchh
Confidence 579999999999999994 445688775 6677665432 1 1234678898877799999999644
No 262
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.06 E-value=0.0018 Score=59.53 Aligned_cols=106 Identities=18% Similarity=0.248 Sum_probs=70.5
Q ss_pred CEEEEEecChhHHHHHHHHHhC---------CCEEE-EECCCCCCCC-------------CCcccC--CHHHHhh--cCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF---------GCSIS-YNSRTKKPSV-------------SYPFYS--NVCELAA--NCD 222 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~---------g~~V~-~~~~~~~~~~-------------~~~~~~--~l~e~l~--~aD 222 (300)
.+|||||+|.||+.+++.+... +.+|. +.+++..... ....+. +++++++ +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 3899999999999999999864 66765 5666532211 012233 8999886 489
Q ss_pred EEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHhCCce
Q 022233 223 ILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPII-DEQELVRCLVQGEIK 276 (300)
Q Consensus 223 vV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~v-d~~aL~~aL~~~~i~ 276 (300)
+|+.++|....... .-.-....++.|.-+|-..-+.+. +-+.|.++.++.++.
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999996543222 223345667888887777555554 567788877777663
No 263
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.06 E-value=0.00041 Score=66.10 Aligned_cols=102 Identities=17% Similarity=0.148 Sum_probs=65.3
Q ss_pred CCEEEEEecChhHH-HHHHHHHhC-CCEE-EEECCCCCCC------CCCc-----ccCCHHHHhh--cCCEEEEecCCCh
Q 022233 169 GKRVGIVGLGSIGS-LVAKRLDAF-GCSI-SYNSRTKKPS------VSYP-----FYSNVCELAA--NCDILIICCGLTA 232 (300)
Q Consensus 169 g~~vgIiG~G~IG~-~~A~~l~~~-g~~V-~~~~~~~~~~------~~~~-----~~~~l~e~l~--~aDvV~l~~p~~~ 232 (300)
-.+|||||+|.||+ .+++.+... ++++ .++|++.... .+.. .+.+++++++ +.|+|++++|...
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 35899999999997 899988865 5676 4778765421 1222 4678999987 7899999999654
Q ss_pred hhhhcchHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCc
Q 022233 233 ETHHMINKQVLSALGKEG-VVINI-GRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 233 ~t~~li~~~~l~~mk~ga-~lIn~-srg~~vd~~aL~~aL~~~~i 275 (300)
..+. ....++.|. +++.- .--.+-+.++|.++.++.++
T Consensus 163 h~~~-----~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 202 (433)
T 1h6d_A 163 HAEF-----AIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK 202 (433)
T ss_dssp HHHH-----HHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHH-----HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCC
Confidence 4331 223344454 55542 12233455566666655443
No 264
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.05 E-value=0.00082 Score=62.19 Aligned_cols=66 Identities=20% Similarity=0.264 Sum_probs=50.0
Q ss_pred CEEEEEecChhHHH-HHHHHHhC-CCEEE-EECCCCCCC----CCCcccCCHHHHhh--cCCEEEEecCCChhhh
Q 022233 170 KRVGIVGLGSIGSL-VAKRLDAF-GCSIS-YNSRTKKPS----VSYPFYSNVCELAA--NCDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG~G~IG~~-~A~~l~~~-g~~V~-~~~~~~~~~----~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~ 235 (300)
.+|||||+|.||+. .++.++.. +++|. +++++++.. .+...+.+++++++ +.|+|++++|.....+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 80 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYE 80 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHH
Confidence 48999999999997 67777765 67774 678765421 13445689999998 6899999999765543
No 265
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.01 E-value=0.0026 Score=58.35 Aligned_cols=97 Identities=15% Similarity=0.240 Sum_probs=63.4
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC---------------CCc--ccCCHHHHhhcCCEEEEec
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV---------------SYP--FYSNVCELAANCDILIICC 228 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~---------------~~~--~~~~l~e~l~~aDvV~l~~ 228 (300)
...++|+|||.|.+|.++|..|...|+ +|..+|++.+... ... ...+. +.+++||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 356799999999999999999998888 9999998765311 111 12344 7899999999997
Q ss_pred CCC--h-hhh-hcc--h----HH---HHhcCCCCcEEEEcCCCcccCHHHH
Q 022233 229 GLT--A-ETH-HMI--N----KQ---VLSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 229 p~~--~-~t~-~li--~----~~---~l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
+.. + .++ .++ | ++ .+....|++++++++ .++|.-..
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt--NPvd~~t~ 132 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT--NPLDAMVW 132 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHHH
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC--CCcHHHHH
Confidence 532 1 111 111 1 11 222335889999997 45554443
No 266
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.98 E-value=0.0015 Score=59.87 Aligned_cols=97 Identities=18% Similarity=0.219 Sum_probs=63.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC---------------CCccc-CCHHHHhhcCCEEEEecCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV---------------SYPFY-SNVCELAANCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~---------------~~~~~-~~l~e~l~~aDvV~l~~p~~ 231 (300)
.++|+|||.|.||.++|..+...|+ +|..+|++++... ..... .+-.+.+++||+|+++.+..
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~p 84 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGVP 84 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCcC
Confidence 5799999999999999999998777 9999998765310 11111 12247899999999996532
Q ss_pred --h-hhh-hcc--h----HH---HHhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 232 --A-ETH-HMI--N----KQ---VLSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 232 --~-~t~-~li--~----~~---~l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
+ .++ .++ | ++ .+....|++++++++ .++|.-..+
T Consensus 85 ~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~t~~ 131 (321)
T 3p7m_A 85 RKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIMVNM 131 (321)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHHHH
T ss_pred CCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHHHHH
Confidence 1 111 111 1 11 222335889999994 566665433
No 267
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.97 E-value=0.013 Score=53.22 Aligned_cols=90 Identities=11% Similarity=0.181 Sum_probs=66.8
Q ss_pred cCCCEEEEEecC---hhHHHHHHHHHhCCCEEEEECCCCC-CC-CCCcccCCHHHHhhcCCEEEEecCCCh---------
Q 022233 167 LGGKRVGIVGLG---SIGSLVAKRLDAFGCSISYNSRTKK-PS-VSYPFYSNVCELAANCDILIICCGLTA--------- 232 (300)
Q Consensus 167 l~g~~vgIiG~G---~IG~~~A~~l~~~g~~V~~~~~~~~-~~-~~~~~~~~l~e~l~~aDvV~l~~p~~~--------- 232 (300)
+.|.+|+++|=| ++..+.+..+..+|++|.+..+..- +. .......+++|+++++|+|..-.--.+
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~ 224 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQE 224 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCCCTTTCCSSCCST
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCCCCEEEeccchhhccccchhHH
Confidence 679999999985 6999999999999999988766321 11 111235689999999999988431111
Q ss_pred --hhhhcchHHHHhcCCCCcEEEEcC
Q 022233 233 --ETHHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 233 --~t~~li~~~~l~~mk~ga~lIn~s 256 (300)
...--++.+.++.+|++++|.-+.
T Consensus 225 ~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 225 GYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp THHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred HHhCCCccCHHHHhhcCCCCEEECCC
Confidence 112346889999999999998886
No 268
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.97 E-value=0.0016 Score=57.56 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=57.2
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCC------C-------C-----------------CC--cc-
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKP------S-------V-----------------SY--PF- 210 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~------~-------~-----------------~~--~~- 210 (300)
..|.+++|.|||+|.+|..+|+.|...|. +++++|...-. . . .. ..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 35899999999999999999999999998 78887653210 0 0 00 00
Q ss_pred -----cCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 211 -----YSNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 211 -----~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
..+++++++++|+|+.++. +.+++.++++...+
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~ 141 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVA 141 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHH
Confidence 0135567889999999886 66678777766555
No 269
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.97 E-value=0.001 Score=63.85 Aligned_cols=64 Identities=20% Similarity=0.160 Sum_probs=48.2
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CC-C-------cccCCHHHHhhcCCEEEEecCCC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VS-Y-------PFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~-~-------~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
.+++|+|+|.|.||+.+++.|...|.+|.+++|+.... .+ . ....++.++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 36899999999999999999999999999998864321 11 1 01124557788999999999864
No 270
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.96 E-value=0.00052 Score=64.20 Aligned_cols=64 Identities=20% Similarity=0.313 Sum_probs=49.8
Q ss_pred CEEEEEecC-hhHHHHHHHHHhC-CCEEE-EECCCCCCC------CCCcccCCHHHHhhc--CCEEEEecCCChh
Q 022233 170 KRVGIVGLG-SIGSLVAKRLDAF-GCSIS-YNSRTKKPS------VSYPFYSNVCELAAN--CDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G-~IG~~~A~~l~~~-g~~V~-~~~~~~~~~------~~~~~~~~l~e~l~~--aDvV~l~~p~~~~ 233 (300)
.+|||||+| .||+..+..+... ++++. ++|+++... .+...+.+++|++++ .|+|++++|....
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H 77 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFH 77 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHH
Confidence 489999999 9999999999875 56765 678765432 144567899999975 8999999996544
No 271
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.95 E-value=0.001 Score=61.12 Aligned_cols=98 Identities=23% Similarity=0.298 Sum_probs=63.3
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC--------------CCcccCCHHHHhhcCCEEEEecCC
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV--------------SYPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~--------------~~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
-.+++|+|||.|.||.++|..|...|. ++..+|++.+... ......+..+.+++||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 346799999999999999999998777 8999998653210 111123445789999999998753
Q ss_pred Ch---hhh-hcc--h----HH---HHhcCCCCcEEEEcCCCcccCHHHH
Q 022233 231 TA---ETH-HMI--N----KQ---VLSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 231 ~~---~t~-~li--~----~~---~l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
.. .++ .++ | ++ .+....|.+++++++ .++|.-+.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvdi~t~ 133 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDILTY 133 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECS--SSHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchHHHHH
Confidence 21 122 122 1 11 233446889999996 56665443
No 272
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.95 E-value=0.0013 Score=60.49 Aligned_cols=65 Identities=12% Similarity=0.222 Sum_probs=47.8
Q ss_pred CEEEEEecChhHH-HHHHHHHhC-CCEEE-EECCCCCCC-------CCCcccCCHHHHhhc--CCEEEEecCCChhh
Q 022233 170 KRVGIVGLGSIGS-LVAKRLDAF-GCSIS-YNSRTKKPS-------VSYPFYSNVCELAAN--CDILIICCGLTAET 234 (300)
Q Consensus 170 ~~vgIiG~G~IG~-~~A~~l~~~-g~~V~-~~~~~~~~~-------~~~~~~~~l~e~l~~--aDvV~l~~p~~~~t 234 (300)
.+|||||+|.||+ ..+..++.. +++|. +++++.... .+...+.++++++++ .|+|++++|.....
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 79 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHY 79 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHH
Confidence 3899999999999 567767665 67775 778772111 133456899999986 89999999975543
No 273
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.95 E-value=0.0032 Score=52.29 Aligned_cols=63 Identities=19% Similarity=0.183 Sum_probs=48.2
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CC-------cccCCHHHHhhcCCEEEEecCCC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SY-------PFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~-------~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
+++|.|.|. |.||+.+++.|...|++|.+.+|++.... .. ....++.++++++|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 479999998 99999999999999999999888754321 11 11234667888999999887644
No 274
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.93 E-value=0.0012 Score=60.52 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=49.3
Q ss_pred CCEEEEEecChhHH-HHHHHHHhC-CCEEE-EECCCCCCCCCCcccCCHHHHhhc---CCEEEEecCCCh
Q 022233 169 GKRVGIVGLGSIGS-LVAKRLDAF-GCSIS-YNSRTKKPSVSYPFYSNVCELAAN---CDILIICCGLTA 232 (300)
Q Consensus 169 g~~vgIiG~G~IG~-~~A~~l~~~-g~~V~-~~~~~~~~~~~~~~~~~l~e~l~~---aDvV~l~~p~~~ 232 (300)
-.+|||||+|.||+ ..++.++.. +++|. +++++.+. .+...+.++++++++ .|+|++++|...
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~-~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~ 93 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV-EGVNSYTTIEAMLDAEPSIDAVSLCMPPQY 93 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC-TTSEEESSHHHHHHHCTTCCEEEECSCHHH
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh-cCCCccCCHHHHHhCCCCCCEEEEeCCcHH
Confidence 45999999999999 788888876 67764 67776543 355567899999876 899999998443
No 275
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.93 E-value=0.0018 Score=62.09 Aligned_cols=97 Identities=22% Similarity=0.308 Sum_probs=70.6
Q ss_pred cccCCCEEEEEecC----------hhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcccCCHHHHhhcCCEEEEecC
Q 022233 165 SKLGGKRVGIVGLG----------SIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 165 ~~l~g~~vgIiG~G----------~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~~~l~e~l~~aDvV~l~~p 229 (300)
..+.|++|+|+|+. .-...+++.|...|.+|.+||+...+. .+.....++++++++||+|++++.
T Consensus 318 ~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~ 397 (446)
T 4a7p_A 318 GDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVTE 397 (446)
T ss_dssp SCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECSC
T ss_pred ccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEeeC
Confidence 35789999999997 678899999999999999999875321 133445688999999999999987
Q ss_pred CChhhhhcchH-HHHhcCCCCcEEEEcCCCcccCHHHH
Q 022233 230 LTAETHHMINK-QVLSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 230 ~~~~t~~li~~-~~l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
-.+- +. ++- .+.+.|+. .+++|+ |+- .|.+.+
T Consensus 398 ~~~f-~~-~d~~~~~~~~~~-~~i~D~-r~~-~~~~~~ 430 (446)
T 4a7p_A 398 WDAF-RA-LDLTRIKNSLKS-PVLVDL-RNI-YPPAEL 430 (446)
T ss_dssp CTTT-TS-CCHHHHHTTBSS-CBEECS-SCC-SCHHHH
T ss_pred CHHh-hc-CCHHHHHHhcCC-CEEEEC-CCC-CCHHHH
Confidence 5432 22 343 44555764 678886 654 555544
No 276
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.92 E-value=0.0013 Score=58.28 Aligned_cols=62 Identities=23% Similarity=0.356 Sum_probs=47.0
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-C-------CcccCCHHHHhhc-CCEEEEecC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-S-------YPFYSNVCELAAN-CDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-~-------~~~~~~l~e~l~~-aDvV~l~~p 229 (300)
.+++|.|.|.|.||+.+++.|...|++|.+.+|+..... + .....++.++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 367999999999999999999999999999988765321 1 1122345566776 999987764
No 277
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.91 E-value=0.0018 Score=58.53 Aligned_cols=103 Identities=20% Similarity=0.279 Sum_probs=67.7
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEE-EEECCCCC--CCCCCcccCCHHHHhh--cCCEEEEecCCChhhhhcchHHHH
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSI-SYNSRTKK--PSVSYPFYSNVCELAA--NCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V-~~~~~~~~--~~~~~~~~~~l~e~l~--~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
.+++|+|. |++|+.+++.+...|+++ ...++... ...+...+.+++|+.+ ..|++++++|.. .+...+. +..
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~-~~~~~v~-ea~ 91 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAP-FAKDAVF-EAI 91 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHHH-HHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHH-HHHHHHH-HHH
Confidence 45788899 999999999999999973 34454321 1135556789999998 899999999843 3333332 233
Q ss_pred hcCCCCcEEEEcCCC-cccCHHHHHHHHHhCCce
Q 022233 244 SALGKEGVVINIGRG-PIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 244 ~~mk~ga~lIn~srg-~~vd~~aL~~aL~~~~i~ 276 (300)
+. .... +|..+.| +..+++.|.++.++..+.
T Consensus 92 ~~-Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 92 DA-GIEL-IVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp HT-TCSE-EEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HC-CCCE-EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 32 2222 4444444 234567888888877664
No 278
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.91 E-value=0.0026 Score=61.45 Aligned_cols=110 Identities=13% Similarity=0.154 Sum_probs=70.2
Q ss_pred CCEEEEEecChhH--HHHHHHHHh---C-CCEEEEECCCCCCC---------------CC--CcccCCHHHHhhcCCEEE
Q 022233 169 GKRVGIVGLGSIG--SLVAKRLDA---F-GCSISYNSRTKKPS---------------VS--YPFYSNVCELAANCDILI 225 (300)
Q Consensus 169 g~~vgIiG~G~IG--~~~A~~l~~---~-g~~V~~~~~~~~~~---------------~~--~~~~~~l~e~l~~aDvV~ 225 (300)
.++|+|||.|.|| .++|..|.. + |.+|..||++.+.. .. .....++++.+++||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 4699999999974 655666643 3 78999999876421 01 122357888999999999
Q ss_pred EecCCCh---------------------hh----------------hhcch--HHHHhcCCCCcEEEEcCCCcccCHHHH
Q 022233 226 ICCGLTA---------------------ET----------------HHMIN--KQVLSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 226 l~~p~~~---------------------~t----------------~~li~--~~~l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
+++|... +| ..++. .+......|++++||++-.--+-+.++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 9997421 11 00110 122334468999999987665555666
Q ss_pred HHHHHhCCceEEE
Q 022233 267 VRCLVQGEIKGAG 279 (300)
Q Consensus 267 ~~aL~~~~i~~a~ 279 (300)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 55 5555665553
No 279
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.89 E-value=0.0015 Score=60.91 Aligned_cols=61 Identities=20% Similarity=0.398 Sum_probs=46.7
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----------CCcccCCHHHHhhcCCEEEE
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----------SYPFYSNVCELAANCDILII 226 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----------~~~~~~~l~e~l~~aDvV~l 226 (300)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|+.+.... .......+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 46799999999999999999999999999999887654321 00111236677888998865
No 280
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.89 E-value=0.0018 Score=59.47 Aligned_cols=97 Identities=24% Similarity=0.321 Sum_probs=63.4
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC---------------CCcccCCHHHHhhcCCEEEEecCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV---------------SYPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~---------------~~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
.++|+|||.|.||.++|..|+..|. +|..+|++.+... ......+..+.+++||+|+++.+..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGAN 84 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccC
Confidence 5699999999999999999998887 8999998653211 1111123346899999999997532
Q ss_pred --h-hhh-hcc--h----H---HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 232 --A-ETH-HMI--N----K---QVLSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 232 --~-~t~-~li--~----~---~~l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
+ .++ .++ | + +.+....|.+++++++ .++|.-+.+
T Consensus 85 ~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt--NPvd~~t~~ 131 (326)
T 3pqe_A 85 QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT--NPVDILTYA 131 (326)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC--ChHHHHHHH
Confidence 1 111 111 1 1 1233346889999997 456654433
No 281
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.88 E-value=0.0004 Score=63.95 Aligned_cols=97 Identities=10% Similarity=0.089 Sum_probs=63.8
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC----------C------CcccCCHHHHhhcCCEEEEecC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV----------S------YPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~----------~------~~~~~~l~e~l~~aDvV~l~~p 229 (300)
..++|+|||.|.||..+|..++..|+ +|..+|.+.+... . .....+.++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999998887 8999998653211 0 011235555 999999999864
Q ss_pred CCh---hhh-hcc--h----H---HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 230 LTA---ETH-HMI--N----K---QVLSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 230 ~~~---~t~-~li--~----~---~~l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
... .++ .++ | + +.+....|++++++++ .++|.-..+
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt--NPvdi~t~~ 147 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP--ELGTDKNKQ 147 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHHHHHH
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC--CccHHHHHH
Confidence 321 111 112 1 1 1233347899999997 456654443
No 282
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.87 E-value=0.0027 Score=57.72 Aligned_cols=64 Identities=17% Similarity=0.240 Sum_probs=49.7
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEE-EECCCCCCCC------CCcccCCHHHHh----------hcCCEEEEecCCC
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSIS-YNSRTKKPSV------SYPFYSNVCELA----------ANCDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~-~~~~~~~~~~------~~~~~~~l~e~l----------~~aDvV~l~~p~~ 231 (300)
.+|||||+ |.||+..++.++..+.++. ++|+++.... ....+.++++++ .+.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 58999999 7899999999998888764 6787765321 234567888887 5689999999965
Q ss_pred hh
Q 022233 232 AE 233 (300)
Q Consensus 232 ~~ 233 (300)
..
T Consensus 84 ~H 85 (312)
T 3o9z_A 84 LH 85 (312)
T ss_dssp GH
T ss_pred hh
Confidence 44
No 283
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.83 E-value=0.0013 Score=63.48 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=66.7
Q ss_pred CCEEEEEec----ChhHHHHHHHHHhC--CCEEE-EECCCCCCC------CCC---cccCCHHHHhh--cCCEEEEecCC
Q 022233 169 GKRVGIVGL----GSIGSLVAKRLDAF--GCSIS-YNSRTKKPS------VSY---PFYSNVCELAA--NCDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG~----G~IG~~~A~~l~~~--g~~V~-~~~~~~~~~------~~~---~~~~~l~e~l~--~aDvV~l~~p~ 230 (300)
-.+|||||+ |.||+..++.++.. +++|. ++|+++... .+. ..+.+++++++ +.|+|++++|.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~ 118 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKV 118 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCH
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCc
Confidence 458999999 99999999999886 67764 778775421 133 25789999996 68999999995
Q ss_pred ChhhhhcchHHHHhcCCCC-------cEEEEc-CCCcccCHHHHHHHHHhCC
Q 022233 231 TAETHHMINKQVLSALGKE-------GVVINI-GRGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 231 ~~~t~~li~~~~l~~mk~g-------a~lIn~-srg~~vd~~aL~~aL~~~~ 274 (300)
....+ + ....++.| .+++.- .--.+-+.++|+++.++.+
T Consensus 119 ~~H~~--~---~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g 165 (479)
T 2nvw_A 119 PEHYE--V---VKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRA 165 (479)
T ss_dssp HHHHH--H---HHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCT
T ss_pred HHHHH--H---HHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcC
Confidence 54333 2 12223334 466664 2223445566666666554
No 284
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.82 E-value=0.0029 Score=57.27 Aligned_cols=104 Identities=23% Similarity=0.289 Sum_probs=67.3
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEE-EEECCCC--CCCCCCcccCCHHHHhh--c-CCEEEEecCCChhhhhcchHH
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSI-SYNSRTK--KPSVSYPFYSNVCELAA--N-CDILIICCGLTAETHHMINKQ 241 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V-~~~~~~~--~~~~~~~~~~~l~e~l~--~-aDvV~l~~p~~~~t~~li~~~ 241 (300)
..++.|+|. |++|+.+++.+...|+++ ...++.. ....+...+.+++|+.+ . .|++++++|.. .+...+. +
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~-~~~~~v~-e 90 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAP-FAPDAVY-E 90 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGG-GHHHHHH-H
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHH-HHHHHHH-H
Confidence 335777798 999999999999889983 3455442 11235566789999987 5 99999999854 3333332 2
Q ss_pred HHhcCCCCcEEEEcCCC-cccCHHHHHHHHHhCCce
Q 022233 242 VLSALGKEGVVINIGRG-PIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 242 ~l~~mk~ga~lIn~srg-~~vd~~aL~~aL~~~~i~ 276 (300)
..+ ..... +|..+.| +..+++.|.++.++..+.
T Consensus 91 a~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 91 AVD-AGIRL-VVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp HHH-TTCSE-EEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 222 22222 3444444 223567888888877664
No 285
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.81 E-value=0.0014 Score=59.83 Aligned_cols=95 Identities=17% Similarity=0.242 Sum_probs=62.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC---------------CCcccCCHHHHhhcCCEEEEecCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV---------------SYPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~---------------~~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
.++|+|||.|.+|.++|..|...|. +|..+|.+.+... ......+..+.+++||+|+++.+..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAA 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCC
Confidence 4699999999999999999987774 8999997642110 1111124467899999999998653
Q ss_pred hh---hh--------hcch--HHHHhcCCCCcEEEEcCCCcccCHHH
Q 022233 232 AE---TH--------HMIN--KQVLSALGKEGVVINIGRGPIIDEQE 265 (300)
Q Consensus 232 ~~---t~--------~li~--~~~l~~mk~ga~lIn~srg~~vd~~a 265 (300)
.. ++ .++. .+.+....|++++|+++ .++|.-.
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t 130 (317)
T 3d0o_A 86 QKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDILA 130 (317)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHH
Confidence 21 11 1110 11223347899999975 5565543
No 286
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.81 E-value=0.0029 Score=57.58 Aligned_cols=65 Identities=14% Similarity=0.220 Sum_probs=49.9
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEE-EECCCCCCCC------CCcccCCHHHHh-----------hcCCEEEEecCC
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSIS-YNSRTKKPSV------SYPFYSNVCELA-----------ANCDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~-~~~~~~~~~~------~~~~~~~l~e~l-----------~~aDvV~l~~p~ 230 (300)
.++||||+ |.||+..++.++..+.++. ++|+++.... ....+.++++++ .+.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 7999999999998898764 6787655321 234467888887 568999999996
Q ss_pred Chhh
Q 022233 231 TAET 234 (300)
Q Consensus 231 ~~~t 234 (300)
....
T Consensus 84 ~~H~ 87 (318)
T 3oa2_A 84 YLHY 87 (318)
T ss_dssp GGHH
T ss_pred HHHH
Confidence 5443
No 287
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.0042 Score=52.73 Aligned_cols=62 Identities=19% Similarity=0.289 Sum_probs=47.9
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCC----C-------CcccCCHHHHhhcCCEEEEecCCC
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSV----S-------YPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----~-------~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
++|.|.| .|.||+.+++.|...|++|.+.+|+..... . .....++.++++++|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 6899999 599999999999999999999998765321 1 112235667889999999887654
No 288
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.80 E-value=0.0095 Score=54.77 Aligned_cols=91 Identities=10% Similarity=0.044 Sum_probs=68.8
Q ss_pred ccCCCEEEEEecC--hhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEe
Q 022233 166 KLGGKRVGIVGLG--SIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIIC 227 (300)
Q Consensus 166 ~l~g~~vgIiG~G--~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~ 227 (300)
.+.|.+|+++|=| ++..+++..+..+|++|.+..+..-... + .....+++++++++|||..-
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 231 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence 4779999999996 9999999999999999988876432111 1 22357899999999999884
Q ss_pred cCC--------Chh-----hhhcchHHHHhcC-CCCcEEEEcC
Q 022233 228 CGL--------TAE-----THHMINKQVLSAL-GKEGVVINIG 256 (300)
Q Consensus 228 ~p~--------~~~-----t~~li~~~~l~~m-k~ga~lIn~s 256 (300)
.=. ..+ ...-++.+.++.+ |++++|.-+.
T Consensus 232 ~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 232 VWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp CCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECS
T ss_pred CccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCC
Confidence 431 111 1235689999999 9999999885
No 289
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.79 E-value=0.0016 Score=61.09 Aligned_cols=66 Identities=14% Similarity=0.036 Sum_probs=50.2
Q ss_pred CCEEEEEecCh---hHHHHHHHHHhCC-CEEE--EECCCCCCC------CCC---cccCCHHHHhhc-------CCEEEE
Q 022233 169 GKRVGIVGLGS---IGSLVAKRLDAFG-CSIS--YNSRTKKPS------VSY---PFYSNVCELAAN-------CDILII 226 (300)
Q Consensus 169 g~~vgIiG~G~---IG~~~A~~l~~~g-~~V~--~~~~~~~~~------~~~---~~~~~l~e~l~~-------aDvV~l 226 (300)
-.+|||||+|. ||+..+..++..+ +++. ++|++++.. .+. ..+.++++++++ .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 35899999999 9999998887665 6765 468765431 233 457899999975 899999
Q ss_pred ecCCChhh
Q 022233 227 CCGLTAET 234 (300)
Q Consensus 227 ~~p~~~~t 234 (300)
++|.....
T Consensus 92 ~tp~~~H~ 99 (398)
T 3dty_A 92 ATPNGTHY 99 (398)
T ss_dssp ESCGGGHH
T ss_pred CCCcHHHH
Confidence 99976543
No 290
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.78 E-value=0.0011 Score=63.12 Aligned_cols=65 Identities=20% Similarity=0.269 Sum_probs=50.0
Q ss_pred CCEEEEEec----ChhHHHHHHHHHhC--CCEE-EEECCCCCCC------CCCc---ccCCHHHHhh--cCCEEEEecCC
Q 022233 169 GKRVGIVGL----GSIGSLVAKRLDAF--GCSI-SYNSRTKKPS------VSYP---FYSNVCELAA--NCDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG~----G~IG~~~A~~l~~~--g~~V-~~~~~~~~~~------~~~~---~~~~l~e~l~--~aDvV~l~~p~ 230 (300)
-.+|||||+ |.||+..++.++.. +++| .+++++.... .+.. .+.+++++++ +.|+|++++|.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 99 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCc
Confidence 358999999 99999999999987 6776 4778765421 1222 5679999997 58999999985
Q ss_pred Chh
Q 022233 231 TAE 233 (300)
Q Consensus 231 ~~~ 233 (300)
...
T Consensus 100 ~~H 102 (438)
T 3btv_A 100 ASH 102 (438)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 291
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.78 E-value=0.0064 Score=56.18 Aligned_cols=83 Identities=12% Similarity=0.090 Sum_probs=54.0
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCCC-EEEEECCCCCCCC----------C--CcccCCHHHHhhcCCEEEEecCCChhhh
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFGC-SISYNSRTKKPSV----------S--YPFYSNVCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~----------~--~~~~~~l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
++|||+| .|.||+.+.+.|..... ++....+...... + .....++++ +.++|+|++|+|.....+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s~~ 83 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVFAR 83 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHHHH
Confidence 5899999 89999999999987654 7665543322111 0 001223444 578999999999765433
Q ss_pred hcchHHHHhcCCCCcEEEEcCCC
Q 022233 236 HMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg 258 (300)
+-..+ ++.|..+|+.|--
T Consensus 84 --~a~~~---~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 84 --EFDRY---SALAPVLVDLSAD 101 (345)
T ss_dssp --THHHH---HTTCSEEEECSST
T ss_pred --HHHHH---HHCCCEEEEcCcc
Confidence 22222 4678899999753
No 292
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.77 E-value=0.0035 Score=56.10 Aligned_cols=85 Identities=19% Similarity=0.214 Sum_probs=56.1
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhC-CCEEEE-ECCCCCCC------------CCCcccCCHHHHhhcCCEEEEecCCChh
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAF-GCSISY-NSRTKKPS------------VSYPFYSNVCELAANCDILIICCGLTAE 233 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~-g~~V~~-~~~~~~~~------------~~~~~~~~l~e~l~~aDvV~l~~p~~~~ 233 (300)
-.+|+|+| +|+||+.+++.+... ++++.+ ++++..+. .+.....++++++.++|+|+-+.+.. .
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~-a 85 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPE-G 85 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHH-H
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHH-H
Confidence 35899999 999999999988754 677764 67764321 12334578999999999999887522 2
Q ss_pred hhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 234 THHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
+... ....++.|.-+|-...|
T Consensus 86 ~~~~----~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 86 TLVH----LDAALRHDVKLVIGTTG 106 (272)
T ss_dssp HHHH----HHHHHHHTCEEEECCCC
T ss_pred HHHH----HHHHHHcCCCEEEECCC
Confidence 2211 22224455555655556
No 293
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.77 E-value=0.0017 Score=59.53 Aligned_cols=65 Identities=23% Similarity=0.267 Sum_probs=49.6
Q ss_pred CCEEEEEecC-hhHHHHHHHHHhC--CCEE-EEECCCCCCCC------CC-cccCCHHHHhh--cCCEEEEecCCChh
Q 022233 169 GKRVGIVGLG-SIGSLVAKRLDAF--GCSI-SYNSRTKKPSV------SY-PFYSNVCELAA--NCDILIICCGLTAE 233 (300)
Q Consensus 169 g~~vgIiG~G-~IG~~~A~~l~~~--g~~V-~~~~~~~~~~~------~~-~~~~~l~e~l~--~aDvV~l~~p~~~~ 233 (300)
-.+|||||+| .+|+..++.++.. ++++ .++|++++... +. ..+.+++++++ +.|+|++++|....
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 95 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELN 95 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHH
Confidence 3489999999 8999999999876 4676 57788754321 22 45689999997 58999999986543
No 294
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.76 E-value=0.022 Score=51.88 Aligned_cols=98 Identities=11% Similarity=0.179 Sum_probs=72.7
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEecC
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~p 229 (300)
+.|.+|+++|= +++.++++..+..+|++|.+..+..-... + .....+++|+++++|+|..-.=
T Consensus 153 l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w 232 (315)
T 1pvv_A 153 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVW 232 (315)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCC
T ss_pred cCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcce
Confidence 67999999998 89999999999999999988876432111 1 2235789999999999988442
Q ss_pred C-------Chh-----hhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 230 L-------TAE-----THHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 230 ~-------~~~-----t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
. .++ ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 233 ~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~e 282 (315)
T 1pvv_A 233 ASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDD 282 (315)
T ss_dssp CCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred eccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCHH
Confidence 1 111 12356889999999999999986 56555543
No 295
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.74 E-value=0.022 Score=52.16 Aligned_cols=98 Identities=16% Similarity=0.185 Sum_probs=72.0
Q ss_pred cCCCEEEEEecC--hhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEec
Q 022233 167 LGGKRVGIVGLG--SIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 167 l~g~~vgIiG~G--~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~ 228 (300)
+.|.+|+++|=| ++..+.+..+..+|++|.+..+..-... + .....+++|+++++|+|..-.
T Consensus 165 l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~ 244 (325)
T 1vlv_A 165 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 244 (325)
T ss_dssp STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred cCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEecc
Confidence 679999999996 9999999999999999998876432111 1 223578999999999998843
Q ss_pred CC-------Chh-----hhhcchHHHHhcC-CCCcEEEEcC---CCcccCHH
Q 022233 229 GL-------TAE-----THHMINKQVLSAL-GKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 229 p~-------~~~-----t~~li~~~~l~~m-k~ga~lIn~s---rg~~vd~~ 264 (300)
=. .++ ...-++.+.++.+ |++++|.-+. ||.=|+.+
T Consensus 245 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~e 296 (325)
T 1vlv_A 245 WASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYE 296 (325)
T ss_dssp CC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHH
T ss_pred ccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccCHH
Confidence 21 011 1234688999999 9999999986 56545443
No 296
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.73 E-value=0.0033 Score=53.24 Aligned_cols=63 Identities=19% Similarity=0.247 Sum_probs=48.4
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCC----------CCcc-cCCHHHHhhcCCEEEEecCCCh
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSV----------SYPF-YSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----------~~~~-~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
|+|.|.| .|.||+.+++.|...|++|.+.+|+..... .... ..++.++++++|+|+.+.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 4799999 899999999999999999999988765321 1112 2345667889999999887543
No 297
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.72 E-value=0.0016 Score=59.62 Aligned_cols=95 Identities=18% Similarity=0.285 Sum_probs=61.3
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC--------------CCcccCCHHHHhhcCCEEEEecCCCh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV--------------SYPFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~--------------~~~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
.++|+|||.|.+|.+++..+...+. +|..+|...+... ......+..+.+++||+|+++.+...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~ 84 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 3699999999999999999987676 8999998643211 11111245678999999999986532
Q ss_pred h---hh--------hcch--HHHHhcCCCCcEEEEcCCCcccCHHH
Q 022233 233 E---TH--------HMIN--KQVLSALGKEGVVINIGRGPIIDEQE 265 (300)
Q Consensus 233 ~---t~--------~li~--~~~l~~mk~ga~lIn~srg~~vd~~a 265 (300)
. ++ .++. .+.+....|.+++|++ ..++|.-.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~~t 128 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA--ANPVDILT 128 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEEC--SSSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCcHHHHH
Confidence 1 11 1110 1122334789999998 45566543
No 298
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.72 E-value=0.0043 Score=53.18 Aligned_cols=65 Identities=22% Similarity=0.293 Sum_probs=50.3
Q ss_pred cCCCEEEEEe-cChhHHHHHHHHHhCCC--EEEEECCCCCCCC-----C-------CcccCCHHHHhhcCCEEEEecCCC
Q 022233 167 LGGKRVGIVG-LGSIGSLVAKRLDAFGC--SISYNSRTKKPSV-----S-------YPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 167 l~g~~vgIiG-~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~-----~-------~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
+.+|++.|.| .|.||+.+++.|...|+ +|.+.+|++.... . .....+++++++..|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5689999999 69999999999999999 9999888764321 1 111245667788999999988654
No 299
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.72 E-value=0.021 Score=51.93 Aligned_cols=98 Identities=12% Similarity=0.222 Sum_probs=69.9
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCC-CCC---------CCcccCCHHHHhhcCCEEEEec----CC-
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKK-PSV---------SYPFYSNVCELAANCDILIICC----GL- 230 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~-~~~---------~~~~~~~l~e~l~~aDvV~l~~----p~- 230 (300)
+.|.+|++||= +++.++.+..+..+|++|.+..+..- +.. ......+++|+++++|+|..-. ..
T Consensus 152 l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e 231 (309)
T 4f2g_A 152 IRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFE 231 (309)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcch
Confidence 67999999996 57888888889999999988766321 111 1123578999999999998743 11
Q ss_pred --Chh-----hhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 231 --TAE-----THHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 231 --~~~-----t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
.++ ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 232 ~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 275 (309)
T 4f2g_A 232 AENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGEEVTAG 275 (309)
T ss_dssp ------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTTTBCHH
T ss_pred hhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCceecHH
Confidence 000 12346899999999999999886 66655543
No 300
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.70 E-value=0.0021 Score=61.25 Aligned_cols=65 Identities=9% Similarity=0.156 Sum_probs=49.0
Q ss_pred CCEEEEEecChhHHHHHHHHHhC-CCEE-EEECCCCCCC---------CC---CcccC----CHHHHhh--cCCEEEEec
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAF-GCSI-SYNSRTKKPS---------VS---YPFYS----NVCELAA--NCDILIICC 228 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~-g~~V-~~~~~~~~~~---------~~---~~~~~----~l~e~l~--~aDvV~l~~ 228 (300)
-.+|||||+|.||+..++.+... |++| .++|++++.. .+ ...+. +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 35899999999999999998875 6776 4778775421 11 23455 8999997 589999999
Q ss_pred CCChh
Q 022233 229 GLTAE 233 (300)
Q Consensus 229 p~~~~ 233 (300)
|....
T Consensus 100 p~~~h 104 (444)
T 2ixa_A 100 PWEWH 104 (444)
T ss_dssp CGGGH
T ss_pred CcHHH
Confidence 96544
No 301
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.70 E-value=0.0022 Score=59.48 Aligned_cols=65 Identities=11% Similarity=0.110 Sum_probs=48.9
Q ss_pred CCEEEEEecChhHH-HHHHHHHhCCCEEE-EECCCCCCC------CC-CcccCCHHHHhhc--CCEEEEecCCChh
Q 022233 169 GKRVGIVGLGSIGS-LVAKRLDAFGCSIS-YNSRTKKPS------VS-YPFYSNVCELAAN--CDILIICCGLTAE 233 (300)
Q Consensus 169 g~~vgIiG~G~IG~-~~A~~l~~~g~~V~-~~~~~~~~~------~~-~~~~~~l~e~l~~--aDvV~l~~p~~~~ 233 (300)
-.+|||||+|.+|. .++..+..-++++. ++|++++.. .+ ...+.++++++++ .|+|++++|....
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H 101 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSER 101 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHH
Confidence 45999999999995 57777777788865 678875432 12 3457899999976 8999999986543
No 302
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.69 E-value=0.0024 Score=58.97 Aligned_cols=64 Identities=14% Similarity=0.184 Sum_probs=46.1
Q ss_pred CEEEEEecChhHHHHHHHHHhC--------CCEEE-EECCCCCCCC------CC-cccCCHHHHhhc--CCEEEEecCCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF--------GCSIS-YNSRTKKPSV------SY-PFYSNVCELAAN--CDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~--------g~~V~-~~~~~~~~~~------~~-~~~~~l~e~l~~--aDvV~l~~p~~ 231 (300)
-+|||||+|.||+.-++.++.. +++|. ++|++++... +. ..+.++++++++ .|+|++++|..
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~~ 105 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPNQ 105 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCGG
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCChH
Confidence 4899999999999877766542 56764 6788765432 33 356899999964 69999999966
Q ss_pred hh
Q 022233 232 AE 233 (300)
Q Consensus 232 ~~ 233 (300)
-.
T Consensus 106 ~H 107 (393)
T 4fb5_A 106 FH 107 (393)
T ss_dssp GH
T ss_pred HH
Confidence 54
No 303
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.68 E-value=0.0021 Score=61.90 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=69.3
Q ss_pred CCEEEEEecChh-HHHHHHHHHhC-----CCEEEEECCCCCCCC---------------C--CcccCCHHHHhhcCCEEE
Q 022233 169 GKRVGIVGLGSI-GSLVAKRLDAF-----GCSISYNSRTKKPSV---------------S--YPFYSNVCELAANCDILI 225 (300)
Q Consensus 169 g~~vgIiG~G~I-G~~~A~~l~~~-----g~~V~~~~~~~~~~~---------------~--~~~~~~l~e~l~~aDvV~ 225 (300)
.++|+|||.|.. |.++|..|... +.+|..||+..+... . .....++++++++||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 459999999998 66677666655 558999998764210 1 112357889999999999
Q ss_pred EecCCChh---hh----------------------------hcch--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 226 ICCGLTAE---TH----------------------------HMIN--KQVLSALGKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 226 l~~p~~~~---t~----------------------------~li~--~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
+++|.... ++ .++. .+......|++++||++-.--+-+.++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99986321 11 0110 112333468999999976654444555444433
Q ss_pred CCceEE
Q 022233 273 GEIKGA 278 (300)
Q Consensus 273 ~~i~~a 278 (300)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 355544
No 304
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.65 E-value=0.008 Score=55.83 Aligned_cols=84 Identities=12% Similarity=0.241 Sum_probs=54.8
Q ss_pred CCCEEEEEe-cChhHHHHHHHHHhCC-CEEEEECCCCCCCC----------CC---c-ccCCHHHHhhcCCEEEEecCCC
Q 022233 168 GGKRVGIVG-LGSIGSLVAKRLDAFG-CSISYNSRTKKPSV----------SY---P-FYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 168 ~g~~vgIiG-~G~IG~~~A~~l~~~g-~~V~~~~~~~~~~~----------~~---~-~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
...+|+|+| +|.||+.+++.|.... +++........... +. . ...+ ++.+.++|+|++|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346999999 9999999999998765 47766543322111 00 0 0112 45567899999999854
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
.. .+.....+.|+.+||.|.-
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa~ 114 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSAD 114 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSST
T ss_pred hH------HHHHHHHhCCCEEEECCcc
Confidence 43 2222222779999999753
No 305
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.65 E-value=0.0067 Score=57.79 Aligned_cols=87 Identities=10% Similarity=0.187 Sum_probs=65.1
Q ss_pred cCCCEEEEEecC----------hhHHHHHHHHHhC-CCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhh
Q 022233 167 LGGKRVGIVGLG----------SIGSLVAKRLDAF-GCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 167 l~g~~vgIiG~G----------~IG~~~A~~l~~~-g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
+.|++|+|+|+. .-...+++.|... |.+|.+||+..... ....++++++++||+|++++.-.+ -+
T Consensus 313 ~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~---~~~~~~~~~~~~ad~vvi~t~~~~-f~ 388 (431)
T 3ojo_A 313 LSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD---FVEHDMSHAVKDASLVLILSDHSE-FK 388 (431)
T ss_dssp SSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT---TBCSTTHHHHTTCSEEEECSCCGG-GT
T ss_pred cCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc---cccCCHHHHHhCCCEEEEecCCHH-Hh
Confidence 589999999984 3468899999999 99999999976543 234678999999999999986443 23
Q ss_pred hcchHHHHhcCCCCcEEEEcCCCcc
Q 022233 236 HMINKQVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~srg~~ 260 (300)
. ++-+.++.|+ +.+++|+ |+-+
T Consensus 389 ~-~d~~~~~~~~-~~~i~D~-r~~~ 410 (431)
T 3ojo_A 389 N-LSDSHFDKMK-HKVIFDT-KNVV 410 (431)
T ss_dssp S-CCGGGGTTCS-SCEEEES-SCCC
T ss_pred c-cCHHHHHhCC-CCEEEEC-CCCC
Confidence 2 3333346676 6789996 6554
No 306
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.63 E-value=0.0062 Score=54.90 Aligned_cols=84 Identities=13% Similarity=0.069 Sum_probs=56.4
Q ss_pred CEEEEEe-cChhHHHHHHHHHh-CCCEEE-EECCCCCC-------------CCCCcccCCHHHHhhcCCEEEEecCCChh
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDA-FGCSIS-YNSRTKKP-------------SVSYPFYSNVCELAANCDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~-~g~~V~-~~~~~~~~-------------~~~~~~~~~l~e~l~~aDvV~l~~p~~~~ 233 (300)
.+|+|+| +|+||+.+++.+.. -++++. +++++... ..+...+.++++++.++|+|+-..+ ++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~--p~ 99 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ--PQ 99 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC--HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC--HH
Confidence 4899999 99999999999874 477865 56775432 1133456799999999999997764 22
Q ss_pred hhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 234 THHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
.. .......++.|.-+|-...|
T Consensus 100 a~---~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 100 AS---VLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp HH---HHHHHHHHHHTCEEEECCCC
T ss_pred HH---HHHHHHHHHcCCCEEEECCC
Confidence 11 12222334556666665566
No 307
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.63 E-value=0.0046 Score=58.38 Aligned_cols=65 Identities=23% Similarity=0.258 Sum_probs=48.7
Q ss_pred CCEEEEEecCh---hHHHHHHHHHhCC-CEEE--EECCCCCCC------CCC---cccCCHHHHhhc-------CCEEEE
Q 022233 169 GKRVGIVGLGS---IGSLVAKRLDAFG-CSIS--YNSRTKKPS------VSY---PFYSNVCELAAN-------CDILII 226 (300)
Q Consensus 169 g~~vgIiG~G~---IG~~~A~~l~~~g-~~V~--~~~~~~~~~------~~~---~~~~~l~e~l~~-------aDvV~l 226 (300)
-.+|||||+|. ||+..+..++..+ +++. +++++++.. .+. ..+.++++++++ .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35899999999 9999988888765 5765 568765432 133 456899999976 899999
Q ss_pred ecCCChh
Q 022233 227 CCGLTAE 233 (300)
Q Consensus 227 ~~p~~~~ 233 (300)
++|....
T Consensus 117 ~tp~~~H 123 (417)
T 3v5n_A 117 VTPNHVH 123 (417)
T ss_dssp CSCTTSH
T ss_pred CCCcHHH
Confidence 9997654
No 308
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.63 E-value=0.002 Score=59.19 Aligned_cols=96 Identities=21% Similarity=0.277 Sum_probs=62.0
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC--------------CCcccCCHHHHhhcCCEEEEecCCCh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV--------------SYPFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~--------------~~~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
.++|+|||.|.+|.+++..+...+. +|..+|...+... ......+..+.+++||+|+++.+...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~ 88 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4799999999999999999987675 7999998643210 11111245678999999999986532
Q ss_pred h---hh--------hcch--HHHHhcCCCCcEEEEcCCCcccCHHHH
Q 022233 233 E---TH--------HMIN--KQVLSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 233 ~---t~--------~li~--~~~l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
. ++ .++. .+.+....|.+++|++ ..++|.-..
T Consensus 89 k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~~t~ 133 (326)
T 2zqz_A 89 KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA--ANPVDILTY 133 (326)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC--SSSHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe--CCcHHHHHH
Confidence 1 11 1110 0112223689999998 555665443
No 309
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.63 E-value=0.0046 Score=51.97 Aligned_cols=89 Identities=13% Similarity=0.268 Sum_probs=58.2
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcc-cCCH----HHHhhcCCEEEEecCCChhhhh---
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPF-YSNV----CELAANCDILIICCGLTAETHH--- 236 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~-~~~l----~e~l~~aDvV~l~~p~~~~t~~--- 236 (300)
|+|.|.| .|.||+.+++.|...|++|.+.+|++... .+... ..++ .+.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 5799999 59999999999999999999998875321 11110 0111 1678999999998865432211
Q ss_pred cchHHHHhcCCC--CcEEEEcCCC
Q 022233 237 MINKQVLSALGK--EGVVINIGRG 258 (300)
Q Consensus 237 li~~~~l~~mk~--ga~lIn~srg 258 (300)
.....+++.|++ ...+|.+|..
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHhcCCceEEEEecc
Confidence 112445555554 3567777654
No 310
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.62 E-value=0.01 Score=54.60 Aligned_cols=91 Identities=10% Similarity=0.075 Sum_probs=68.5
Q ss_pred ccCCCEEEEEecC--hhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEe
Q 022233 166 KLGGKRVGIVGLG--SIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIIC 227 (300)
Q Consensus 166 ~l~g~~vgIiG~G--~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~ 227 (300)
.+.|.+|+++|=| ++..+++..+..+|++|.+..+..-... + .....+++++++++|||..-
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD 231 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeC
Confidence 3778999999986 9999999999999999988876432111 2 22357899999999999884
Q ss_pred cCCC--------hh-----hhhcchHHHHhcC-CCCcEEEEcC
Q 022233 228 CGLT--------AE-----THHMINKQVLSAL-GKEGVVINIG 256 (300)
Q Consensus 228 ~p~~--------~~-----t~~li~~~~l~~m-k~ga~lIn~s 256 (300)
.=.. .+ ...-++.+.++.+ |++++|.-+.
T Consensus 232 ~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 232 VWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred CccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCC
Confidence 4310 11 1235689999999 9999999885
No 311
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.58 E-value=0.0065 Score=56.32 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=59.2
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCC------CEEEEEC-CCCC-CCC--------C---Cccc-CCHHHHhhcCCEEEEe
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFG------CSISYNS-RTKK-PSV--------S---YPFY-SNVCELAANCDILIIC 227 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g------~~V~~~~-~~~~-~~~--------~---~~~~-~~l~e~l~~aDvV~l~ 227 (300)
.++|+|+| .|.+|+.+.+.|...+ .++.... ++.. ... + .... .+. +.+.++|+|++|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~a 87 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLA 87 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEEC
Confidence 36999999 9999999999999776 3666553 2211 100 0 0111 122 446689999999
Q ss_pred cCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 022233 228 CGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVR 268 (300)
Q Consensus 228 ~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~ 268 (300)
+|... ..+..+.++.|..+||.|.---.+..+.++
T Consensus 88 lg~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~~~ 122 (352)
T 2nqt_A 88 LPHGH------SAVLAQQLSPETLIIDCGADFRLTDAAVWE 122 (352)
T ss_dssp CTTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHHHH
T ss_pred CCCcc------hHHHHHHHhCCCEEEEECCCccCCcchhhh
Confidence 98653 333444446789999998665544445443
No 312
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.58 E-value=0.0048 Score=56.36 Aligned_cols=98 Identities=15% Similarity=0.278 Sum_probs=64.0
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCC--CCCC---------------CCccc-CCHHHHhhcCCEEEEec
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTK--KPSV---------------SYPFY-SNVCELAANCDILIICC 228 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~--~~~~---------------~~~~~-~~l~e~l~~aDvV~l~~ 228 (300)
..++|+|||.|.||..+|..+...|. +|..+|+++ .... ..... .+-.+.+++||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46799999999999999999999899 999999973 2110 00111 12246799999999997
Q ss_pred CCC--h-hhh-hcc--h----HH---HHhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 229 GLT--A-ETH-HMI--N----KQ---VLSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 229 p~~--~-~t~-~li--~----~~---~l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
... + .++ .++ | ++ .+....|++++++++ .++|.-..+
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs--NPvd~~t~~ 136 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT--NPVDAMTYS 136 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC--ChHHHHHHH
Confidence 432 1 111 122 1 12 223336889999998 456655544
No 313
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.57 E-value=0.0074 Score=54.33 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=74.6
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC--CCCCcccCCHHHHhhcCCEEEEecCCCh----------hh
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP--SVSYPFYSNVCELAANCDILIICCGLTA----------ET 234 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~--~~~~~~~~~l~e~l~~aDvV~l~~p~~~----------~t 234 (300)
++|++|.|+|........++.|...|++|.+....... ..+.....++.+.++++|+|++..|... .+
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCcccccccccC
Confidence 67899999999999999999999999999876432221 1222334557788899999987544321 12
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 235 HHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
...++++.++.++++.+++ + + +|..++.+++.+.+|.
T Consensus 85 ~~~~~~~~l~~~~~l~~i~-~---g-~~~~d~~~~~~~~gi~ 121 (300)
T 2rir_A 85 EVVLKQDHLDRTPAHCVIF-S---G-ISNAYLENIAAQAKRK 121 (300)
T ss_dssp CEECCHHHHHTSCTTCEEE-E---S-SCCHHHHHHHHHTTCC
T ss_pred CccchHHHHhhcCCCCEEE-E---e-cCCHHHHHHHHHCCCE
Confidence 2336788999999988877 3 3 3777766777777664
No 314
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.57 E-value=0.0013 Score=62.19 Aligned_cols=83 Identities=17% Similarity=0.189 Sum_probs=55.5
Q ss_pred CEEEEEecChhHHHHHHHHHhCC---CEEEEECCCCCCCC------------CC-------cccCCHHHHhhc--CCEEE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFG---CSISYNSRTKKPSV------------SY-------PFYSNVCELAAN--CDILI 225 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g---~~V~~~~~~~~~~~------------~~-------~~~~~l~e~l~~--aDvV~ 225 (300)
++|+|+|.|.||+.+++.|...| .+|.+.+|+..... .. ....++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999888 38999888754210 01 112356777877 89999
Q ss_pred EecCCChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 226 ICCGLTAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 226 l~~p~~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
.++|.... .. +.+ ..++.|.-++|++-
T Consensus 82 n~ag~~~~-~~-v~~---a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 82 NIALPYQD-LT-IME---ACLRTGVPYLDTAN 108 (405)
T ss_dssp ECSCGGGH-HH-HHH---HHHHHTCCEEESSC
T ss_pred ECCCcccC-hH-HHH---HHHHhCCCEEEecC
Confidence 99874322 11 212 22345666777644
No 315
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.53 E-value=0.0013 Score=59.00 Aligned_cols=41 Identities=27% Similarity=0.430 Sum_probs=36.8
Q ss_pred ccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCC
Q 022233 160 SLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 160 ~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
|+ ..++.|++|.|||.|.+|.+.++.|...|++|+++++..
T Consensus 6 pl--~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 6 QL--AHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EE--EECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred eE--EEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 55 668999999999999999999999999999999887643
No 316
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.51 E-value=0.0016 Score=56.20 Aligned_cols=64 Identities=14% Similarity=0.161 Sum_probs=45.8
Q ss_pred CCEEEEEecChhHHHHHHH--HHhCCCEEE-EECCCCCCCC----CC--cccCCHHHHhh-cCCEEEEecCCChh
Q 022233 169 GKRVGIVGLGSIGSLVAKR--LDAFGCSIS-YNSRTKKPSV----SY--PFYSNVCELAA-NCDILIICCGLTAE 233 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~--l~~~g~~V~-~~~~~~~~~~----~~--~~~~~l~e~l~-~aDvV~l~~p~~~~ 233 (300)
.++++|||.|.+|+.+++. ... |+++. ++|.++.... +. ....+++++++ +.|+|++++|....
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~~~ 153 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPREAA 153 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHHHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCchhH
Confidence 3589999999999999995 334 78765 5676654321 21 12567888876 58999999996543
No 317
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.50 E-value=0.003 Score=58.45 Aligned_cols=85 Identities=25% Similarity=0.345 Sum_probs=61.6
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC------CCCCcc---cCC---HHHHhhcCCEEEEecCCChhhh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP------SVSYPF---YSN---VCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~------~~~~~~---~~~---l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
.|.+|.|+|.|.||..+++.++.+|++|++.+++++. ..++.. ..+ +.++....|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 5889999999999999999999999999988876542 223221 112 33334568999999875432
Q ss_pred hcchHHHHhcCCCCcEEEEcCC
Q 022233 236 HMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~sr 257 (300)
....++.|+++..+|+++.
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCC
T ss_pred ---HHHHHHHHhcCCEEEEEcc
Confidence 2356677888889998874
No 318
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.50 E-value=0.0023 Score=58.59 Aligned_cols=64 Identities=22% Similarity=0.283 Sum_probs=47.4
Q ss_pred CEEEEEecChhHHH-HHHHHHhC-CCEEE-EECCCCCCCC------CC-cccCCHHHHhhc--CCEEEEecCCChh
Q 022233 170 KRVGIVGLGSIGSL-VAKRLDAF-GCSIS-YNSRTKKPSV------SY-PFYSNVCELAAN--CDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G~IG~~-~A~~l~~~-g~~V~-~~~~~~~~~~------~~-~~~~~l~e~l~~--aDvV~l~~p~~~~ 233 (300)
.+|||||+|.||+. .+..++.. +++|. ++|++++... +. ..+.+++|++++ .|+|++++|....
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H 99 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQH 99 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGH
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchh
Confidence 38999999999986 56777765 67775 6788754321 33 346899999965 7999999996544
No 319
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.50 E-value=0.0071 Score=55.89 Aligned_cols=100 Identities=22% Similarity=0.234 Sum_probs=64.6
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCC--EEEEECCCCCCCC--------------CCcccCCHHHHhhcCCEEEEecC
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGC--SISYNSRTKKPSV--------------SYPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~--------------~~~~~~~l~e~l~~aDvV~l~~p 229 (300)
+.+++|+|||. |.+|+.+|..+...|. +|..+|...+... ......+..+.+++||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 55789999998 9999999999888884 7999998643210 11223577889999999999863
Q ss_pred CC--h-hhh-hcc--h----HH---HHhcCCCCcE-EEEcCCCcccCHHHHHH
Q 022233 230 LT--A-ETH-HMI--N----KQ---VLSALGKEGV-VINIGRGPIIDEQELVR 268 (300)
Q Consensus 230 ~~--~-~t~-~li--~----~~---~l~~mk~ga~-lIn~srg~~vd~~aL~~ 268 (300)
.. + .++ .++ | ++ .+....|.++ +++++ .++|.-..+.
T Consensus 86 ~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs--NPvd~~t~i~ 136 (343)
T 3fi9_A 86 APRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF--NPADITGLVT 136 (343)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS--SSHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec--CchHHHHHHH
Confidence 21 1 111 111 1 11 1222347774 88885 6677666554
No 320
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.49 E-value=0.0029 Score=54.33 Aligned_cols=67 Identities=18% Similarity=0.225 Sum_probs=50.1
Q ss_pred cccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CC-c-----ccCCHHHHhhcCCEEEEecCCC
Q 022233 165 SKLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SY-P-----FYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 165 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~-~-----~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
..+.||+|.|.|. |.||+.+++.|...|++|.+.+|+..... +. . ...++.+++..+|+|+.+....
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 4689999999998 99999999999999999999988754310 11 1 1156678889999999887654
No 321
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.49 E-value=0.0047 Score=52.19 Aligned_cols=89 Identities=12% Similarity=0.147 Sum_probs=58.3
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc-cCCH----HHHhhcCCEEEEecCCC-----hh
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF-YSNV----CELAANCDILIICCGLT-----AE 233 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~-~~~l----~e~l~~aDvV~l~~p~~-----~~ 233 (300)
|+|.|.|. |.||+.+++.|...|++|.+.+|+.... .+... ..++ .+.+..+|+|+.+.... ..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 47999997 9999999999999999999998875321 11110 0111 16788999999887553 11
Q ss_pred hhhcchHHHHhcCC-CCcEEEEcCCC
Q 022233 234 THHMINKQVLSALG-KEGVVINIGRG 258 (300)
Q Consensus 234 t~~li~~~~l~~mk-~ga~lIn~srg 258 (300)
+.-.....+++.|+ .|..+|.+|..
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 11112345566664 34678888654
No 322
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.47 E-value=0.0094 Score=55.92 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=64.3
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh---c
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLS---A 245 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~---~ 245 (300)
-.++.|+|.|.+|+++++.++.+|++|+++|.++.-.. .+-+..+|-++...| . ..+.. +. .
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~--------~~~fp~a~~~~~~~p---~--~~~~~--~~~~~~ 268 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFAT--------TARFPTADEVVVDWP---H--RYLAA--QAEAGA 268 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSC--------TTTCSSSSEEEESCH---H--HHHHH--HHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcc--------cccCCCceEEEeCCh---H--HHHHh--hccccC
Confidence 45999999999999999999999999999887654211 122345554544433 1 11111 11 1
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEE
Q 022233 246 LGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAG 279 (300)
Q Consensus 246 mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~ 279 (300)
+.+++.+|=+.++.-.|...|..+|+.+.....|
T Consensus 269 ~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG 302 (386)
T 2we8_A 269 IDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIG 302 (386)
T ss_dssp CCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEE
T ss_pred CCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEE
Confidence 5677777888888888888888888776333333
No 323
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.44 E-value=0.03 Score=51.14 Aligned_cols=90 Identities=14% Similarity=0.138 Sum_probs=66.3
Q ss_pred cCCCEEEEEecC-hhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEec-
Q 022233 167 LGGKRVGIVGLG-SIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICC- 228 (300)
Q Consensus 167 l~g~~vgIiG~G-~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~- 228 (300)
+.|.+|++||=| ++.++.+..+..+|++|.+..+..-... + .....+++|+++++|+|..-+
T Consensus 153 l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w 232 (321)
T 1oth_A 153 LKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTW 232 (321)
T ss_dssp CTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCS
T ss_pred cCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEecc
Confidence 679999999985 4888888888899999988876432110 1 233578999999999999843
Q ss_pred ---CCChhh--------hhcchHHHHhcCCCCcEEEEcC
Q 022233 229 ---GLTAET--------HHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 229 ---p~~~~t--------~~li~~~~l~~mk~ga~lIn~s 256 (300)
....+. ..-++.+.++.+|++++|.-+.
T Consensus 233 ~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 233 ISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCL 271 (321)
T ss_dssp SCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECS
T ss_pred ccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCC
Confidence 111110 1345889999999999999986
No 324
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.43 E-value=0.0044 Score=56.93 Aligned_cols=105 Identities=10% Similarity=0.089 Sum_probs=64.8
Q ss_pred CEEEEEecChhHHHHHHHHHhC--------CCEEE-EECCCCCCCCC---------------C-cccC---CHHHHh-hc
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF--------GCSIS-YNSRTKKPSVS---------------Y-PFYS---NVCELA-AN 220 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~--------g~~V~-~~~~~~~~~~~---------------~-~~~~---~l~e~l-~~ 220 (300)
.+|||||+|.||+.+++.+... +++|. +.+++...... . ..+. ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 4899999999999999998754 35664 56766432111 1 1223 788887 35
Q ss_pred CCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHhCCc
Q 022233 221 CDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPI-IDEQELVRCLVQGEI 275 (300)
Q Consensus 221 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~aL~~~~i 275 (300)
.|+|+.++|.. .+.+.--+-....++.|--+|-..-..+ .+.++|.++.++.++
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv 141 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNR 141 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCC
Confidence 79999999975 1111111233455666766666544443 244677777666554
No 325
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.41 E-value=0.0041 Score=56.55 Aligned_cols=92 Identities=18% Similarity=0.271 Sum_probs=59.9
Q ss_pred EEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCCC---------------CC--cccCCHHHHhhcCCEEEEecCCCh
Q 022233 171 RVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPSV---------------SY--PFYSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~~---------------~~--~~~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
+|+|||.|.||.++|..+...|+ +|..+|.+.+... .. ....+. +.+++||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999999887677 6999998754211 11 111344 67999999999966432
Q ss_pred h-----------hhhcchHHH---HhcCCCCcEEEEcCCCcccCHHHH
Q 022233 233 E-----------THHMINKQV---LSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 233 ~-----------t~~li~~~~---l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
. +-.++ .+. +....|++++|+++ .++|.-+.
T Consensus 80 k~G~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~t--NPv~~~t~ 124 (308)
T 2d4a_B 80 KPGMTREQLLEANANTM-ADLAEKIKAYAKDAIVVITT--NPVDAMTY 124 (308)
T ss_dssp CSSCCTHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECC--SSHHHHHH
T ss_pred CCCCcHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEeC--CchHHHHH
Confidence 1 11111 122 22235889999984 46665443
No 326
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.37 E-value=0.012 Score=53.53 Aligned_cols=35 Identities=29% Similarity=0.173 Sum_probs=30.8
Q ss_pred CCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCC
Q 022233 168 GGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 168 ~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
..++|.|.|. |.||+.+++.|...|++|.+.+|+.
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3679999998 9999999999999999999998865
No 327
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.36 E-value=0.0032 Score=58.00 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=59.3
Q ss_pred CCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC--------CC--------CcccCCHHHHhhcCCEEEEecCC
Q 022233 168 GGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS--------VS--------YPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 168 ~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~--------~~--------~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
.+++|.|.|. |.||+.+++.|...|++|.+.+|+.... .+ .....++.++++.+|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 3678999994 9999999999999999999888765431 01 11122366778999999976653
Q ss_pred ChhhhhcchHHHHhcCCC-C--cEEEEcCCCc
Q 022233 231 TAETHHMINKQVLSALGK-E--GVVINIGRGP 259 (300)
Q Consensus 231 ~~~t~~li~~~~l~~mk~-g--a~lIn~srg~ 259 (300)
...........++..+++ | ..||.+|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 311111223444444322 3 3788887764
No 328
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.35 E-value=0.013 Score=53.92 Aligned_cols=82 Identities=17% Similarity=0.149 Sum_probs=50.5
Q ss_pred EEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCC------CCCcc-----------------cCCHHHHhhcCCEEE
Q 022233 171 RVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPS------VSYPF-----------------YSNVCELAANCDILI 225 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~------~~~~~-----------------~~~l~e~l~~aDvV~ 225 (300)
+|||+|+|.||+.+++.+... ++++. +.+++.... .+... ..++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 899999999999999999865 46765 456543210 01111 114456667899999
Q ss_pred EecCCChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 226 ICCGLTAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 226 l~~p~~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
.|+|.....+ .-..+ ++.|+.+|+.|-
T Consensus 83 ~aTp~~~s~~--~a~~~---~~aG~kvV~~sa 109 (340)
T 1b7g_O 83 DTTPNGVGAQ--YKPIY---LQLQRNAIFQGG 109 (340)
T ss_dssp ECCSTTHHHH--HHHHH---HHTTCEEEECTT
T ss_pred ECCCCchhHH--HHHHH---HHcCCeEEEeCC
Confidence 9998654322 11222 234666666643
No 329
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.34 E-value=0.022 Score=52.97 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=67.0
Q ss_pred cCCCEEEEEecC--hhHHHHHHHHHhCCCEEEEECCCC-CC--CC-------------C--CcccCCHHHHhhcCCEEEE
Q 022233 167 LGGKRVGIVGLG--SIGSLVAKRLDAFGCSISYNSRTK-KP--SV-------------S--YPFYSNVCELAANCDILII 226 (300)
Q Consensus 167 l~g~~vgIiG~G--~IG~~~A~~l~~~g~~V~~~~~~~-~~--~~-------------~--~~~~~~l~e~l~~aDvV~l 226 (300)
+.|.+|++||=| ++..+++..+..+|++|.+..+.. .+ .. + .....+++|++++||||..
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVyt 257 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYT 257 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEe
Confidence 779999999998 789999999999999998887642 11 10 1 2335789999999999987
Q ss_pred ec----CCChh---h------hhcchHHHHhcCCCCcEEEEcC
Q 022233 227 CC----GLTAE---T------HHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 227 ~~----p~~~~---t------~~li~~~~l~~mk~ga~lIn~s 256 (300)
-+ ....+ . .--++.+.++.+|++++|.-+.
T Consensus 258 d~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 258 DVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp CCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred cccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 32 11111 0 1246889999999999999885
No 330
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.32 E-value=0.0028 Score=56.74 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=43.2
Q ss_pred CCEEEEEec-ChhHHHHHHHHH-hCCCEEE-EECCCCCCC-------------CCCcccCCHHHHhhcCCEEEEec
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLD-AFGCSIS-YNSRTKKPS-------------VSYPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~-~~g~~V~-~~~~~~~~~-------------~~~~~~~~l~e~l~~aDvV~l~~ 228 (300)
.++|+|+|+ |+||+.+++.+. .-|+++. ++++..... .+.....++++++.++|+|+-..
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 358999998 999999999877 4577775 677654321 01222457888888999999554
No 331
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.32 E-value=0.0024 Score=60.08 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=48.0
Q ss_pred CEEEEEecChhHHHHHHHHHhC---------CCEEE-EECCCCCCCC------CC-cccCCHHHHhh--cCCEEEEecCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF---------GCSIS-YNSRTKKPSV------SY-PFYSNVCELAA--NCDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~---------g~~V~-~~~~~~~~~~------~~-~~~~~l~e~l~--~aDvV~l~~p~ 230 (300)
.+|||||+|.||+..++.++.. +.+|. ++|++++... +. ..+.+++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 4899999999999988888754 34664 6787654321 33 35689999996 47999999996
Q ss_pred Chhh
Q 022233 231 TAET 234 (300)
Q Consensus 231 ~~~t 234 (300)
....
T Consensus 107 ~~H~ 110 (412)
T 4gqa_A 107 HLHY 110 (412)
T ss_dssp GGHH
T ss_pred HHHH
Confidence 6543
No 332
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.30 E-value=0.014 Score=51.79 Aligned_cols=62 Identities=26% Similarity=0.281 Sum_probs=45.6
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC--------------CCC-------cccCCHHHHhhcCCEEEE
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS--------------VSY-------PFYSNVCELAANCDILII 226 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~--------------~~~-------~~~~~l~e~l~~aDvV~l 226 (300)
.++|.|.|. |.||+.+++.|...|++|.+.+|+.... .+. ....++.++++++|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 468999996 9999999999999999999988864211 111 112345667788888887
Q ss_pred ecCC
Q 022233 227 CCGL 230 (300)
Q Consensus 227 ~~p~ 230 (300)
+.+.
T Consensus 84 ~a~~ 87 (308)
T 1qyc_A 84 TVGS 87 (308)
T ss_dssp CCCG
T ss_pred CCcc
Confidence 7653
No 333
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.29 E-value=0.0029 Score=57.59 Aligned_cols=96 Identities=19% Similarity=0.246 Sum_probs=61.3
Q ss_pred CEEEEEecChhHHHHHHHHHhCC--CEEEEECCCCCCCC--------------CCcccCCHHHHhhcCCEEEEecCCChh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFG--CSISYNSRTKKPSV--------------SYPFYSNVCELAANCDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g--~~V~~~~~~~~~~~--------------~~~~~~~l~e~l~~aDvV~l~~p~~~~ 233 (300)
++|+|||.|.+|.+++..+...+ -+|..+|...+... ......+..+.+++||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 58999999999999999998766 37999998653210 111111336779999999998864321
Q ss_pred ---h--------hhcch--HHHHhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 234 ---T--------HHMIN--KQVLSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 234 ---t--------~~li~--~~~l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
+ ..++. .+.+....|.++++++ ..++|.-..+
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~~t~~ 125 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA--TNPVDVMTQV 125 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC--SSSHHHHHHH
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe--cCchHHHHHH
Confidence 1 11110 0112223688999998 4556654433
No 334
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.29 E-value=0.01 Score=52.56 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=30.6
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
+++|.|.|. |.||+.+++.|...|++|.+.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 578999996 9999999999999999999888865
No 335
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=96.28 E-value=0.0085 Score=53.88 Aligned_cols=63 Identities=24% Similarity=0.219 Sum_probs=45.5
Q ss_pred CCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-----------CC-------cccCCHHHHhhc--CCEEEE
Q 022233 168 GGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-----------SY-------PFYSNVCELAAN--CDILII 226 (300)
Q Consensus 168 ~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----------~~-------~~~~~l~e~l~~--aDvV~l 226 (300)
.|++|.|.|. |.||+.+++.|...|++|.+.+|+..... .. ....++.++++. .|+|+.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 5789999997 99999999999999999999988754311 11 111234556665 599888
Q ss_pred ecCC
Q 022233 227 CCGL 230 (300)
Q Consensus 227 ~~p~ 230 (300)
+...
T Consensus 82 ~A~~ 85 (345)
T 2z1m_A 82 LAAQ 85 (345)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 336
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.28 E-value=0.0038 Score=59.85 Aligned_cols=71 Identities=20% Similarity=0.166 Sum_probs=50.4
Q ss_pred ccCcccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-------CCCccc-CC-HHHHhhcCCEEEEecCC
Q 022233 160 SLGIGSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-------VSYPFY-SN-VCELAANCDILIICCGL 230 (300)
Q Consensus 160 ~~~~g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-------~~~~~~-~~-l~e~l~~aDvV~l~~p~ 230 (300)
|+ .-+++|++|.|||.|.+|.+.++.|...|.+|+++++...+. ...... .. -++.+.++|+|+.+ |.
T Consensus 5 P~--~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~a-t~ 81 (457)
T 1pjq_A 5 PI--FCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAA-TD 81 (457)
T ss_dssp EE--EECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEEC-CS
T ss_pred ee--EEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEc-CC
Confidence 55 667999999999999999999999999999999998754321 011110 11 12346789988775 55
Q ss_pred Chh
Q 022233 231 TAE 233 (300)
Q Consensus 231 ~~~ 233 (300)
.++
T Consensus 82 ~~~ 84 (457)
T 1pjq_A 82 DDT 84 (457)
T ss_dssp CHH
T ss_pred CHH
Confidence 554
No 337
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.27 E-value=0.016 Score=52.76 Aligned_cols=95 Identities=15% Similarity=0.256 Sum_probs=62.2
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCC--CEEEEECCCCCCC------C---C--Ccc---cCCHHHHhhcCCEEEEecCCCh
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFG--CSISYNSRTKKPS------V---S--YPF---YSNVCELAANCDILIICCGLTA 232 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g--~~V~~~~~~~~~~------~---~--~~~---~~~l~e~l~~aDvV~l~~p~~~ 232 (300)
++|+|||. |.+|..++..|...| .+|..+|+.+... . . ... ..++++++++||+|+++.....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 48999998 999999999999777 5898998865210 0 1 111 1357889999999999875321
Q ss_pred h---hh-hc------chHHH---HhcCCCCcEEEEcCCCcccCHHHH
Q 022233 233 E---TH-HM------INKQV---LSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 233 ~---t~-~l------i~~~~---l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
. ++ .+ +-.++ +....|++++|++ ..++|.-..
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~~~ 125 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNSTIP 125 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchhHH
Confidence 1 11 11 11112 2223578899997 567877653
No 338
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.27 E-value=0.011 Score=56.72 Aligned_cols=92 Identities=12% Similarity=0.176 Sum_probs=66.6
Q ss_pred cCCCEEEEEecCh----------hHHHHHHHHHhCCCEEEEECCCCCCCC------------------CCcccCCHHHHh
Q 022233 167 LGGKRVGIVGLGS----------IGSLVAKRLDAFGCSISYNSRTKKPSV------------------SYPFYSNVCELA 218 (300)
Q Consensus 167 l~g~~vgIiG~G~----------IG~~~A~~l~~~g~~V~~~~~~~~~~~------------------~~~~~~~l~e~l 218 (300)
+.|++|+|+|+.- -...+++.|...|.+|.+||+...... ......++.+++
T Consensus 327 ~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (467)
T 2q3e_A 327 VTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEAC 406 (467)
T ss_dssp CTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHHH
T ss_pred cCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHHH
Confidence 6799999999974 788999999999999999999643210 112234788899
Q ss_pred hcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcc
Q 022233 219 ANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 219 ~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 260 (300)
++||+|++++.-. +-+.+=-..+...|+...+++|+ |+-+
T Consensus 407 ~~ad~~vi~t~~~-~f~~~~~~~~~~~~~~~~~i~D~-r~~~ 446 (467)
T 2q3e_A 407 DGAHAVVICTEWD-MFKELDYERIHKKMLKPAFIFDG-RRVL 446 (467)
T ss_dssp TTCSEEEECSCCG-GGGGSCHHHHHHHSCSSCEEEES-SCTT
T ss_pred hCCcEEEEecCCh-hhhcCCHHHHHHhcCCCCEEEeC-CCcC
Confidence 9999999998754 33333223455678877768887 6643
No 339
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.27 E-value=0.019 Score=51.90 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=68.4
Q ss_pred cCCCEEEEEec---ChhHHHHHHHHHhC-CCEEEEECCCCC-C------CCCC--cccCCHHHHhhcCCEEEEecCCCh-
Q 022233 167 LGGKRVGIVGL---GSIGSLVAKRLDAF-GCSISYNSRTKK-P------SVSY--PFYSNVCELAANCDILIICCGLTA- 232 (300)
Q Consensus 167 l~g~~vgIiG~---G~IG~~~A~~l~~~-g~~V~~~~~~~~-~------~~~~--~~~~~l~e~l~~aDvV~l~~p~~~- 232 (300)
+.|.+|+++|= |++.++++..+..+ |++|.+..+..- + ..+. ....+++|+++++|+|..-.--.+
T Consensus 147 l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er 226 (299)
T 1pg5_A 147 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKER 226 (299)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTT
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCccccc
Confidence 67999999998 59999999999999 999988776432 1 1122 234789999999999988654321
Q ss_pred -----hh-----hhcchHHHHhcCCCCcEEEEcC
Q 022233 233 -----ET-----HHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 233 -----~t-----~~li~~~~l~~mk~ga~lIn~s 256 (300)
+- ..-++.+.++.+|++++|.-+.
T Consensus 227 ~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 227 FVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp SSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred ccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 11 2346889999999999998886
No 340
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.26 E-value=0.0096 Score=58.28 Aligned_cols=82 Identities=15% Similarity=0.144 Sum_probs=59.2
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCC--------CcccCCHHHH-hhcCCEEEEecCCChhhhhcchH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVS--------YPFYSNVCEL-AANCDILIICCGLTAETHHMINK 240 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~--------~~~~~~l~e~-l~~aDvV~l~~p~~~~t~~li~~ 240 (300)
+++.|+|+|++|+.+|+.|...|.+|.+.+.+++.... ......|+++ +++||.++++++..+. +++-.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~--ni~~~ 426 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDST--NIFLT 426 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHH--HHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCchH--HHHHH
Confidence 78999999999999999999999999999887664321 1122345543 7899999999886543 34545
Q ss_pred HHHhcCCCCcEEE
Q 022233 241 QVLSALGKEGVVI 253 (300)
Q Consensus 241 ~~l~~mk~ga~lI 253 (300)
...+.+.+...+|
T Consensus 427 ~~ak~l~~~~~ii 439 (565)
T 4gx0_A 427 LACRHLHSHIRIV 439 (565)
T ss_dssp HHHHHHCSSSEEE
T ss_pred HHHHHHCCCCEEE
Confidence 5666666663333
No 341
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.25 E-value=0.005 Score=56.59 Aligned_cols=64 Identities=17% Similarity=0.219 Sum_probs=46.1
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCC------CCC------------------cccCCHHHHhhcCCE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPS------VSY------------------PFYSNVCELAANCDI 223 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~------~~~------------------~~~~~l~e~l~~aDv 223 (300)
.+|||+|+|.||+.+++.+... ++++. +.+++++.. .+. ....+.++++.+.|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3899999999999999999865 45764 455543211 010 223578888889999
Q ss_pred EEEecCCChh
Q 022233 224 LIICCGLTAE 233 (300)
Q Consensus 224 V~l~~p~~~~ 233 (300)
|+.++|....
T Consensus 83 V~~aTp~~~h 92 (334)
T 2czc_A 83 IVDATPGGIG 92 (334)
T ss_dssp EEECCSTTHH
T ss_pred EEECCCcccc
Confidence 9999996654
No 342
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.25 E-value=0.023 Score=52.68 Aligned_cols=90 Identities=12% Similarity=0.113 Sum_probs=67.8
Q ss_pred cCCCEEEEEecC--hhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEec
Q 022233 167 LGGKRVGIVGLG--SIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 167 l~g~~vgIiG~G--~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~ 228 (300)
+.|.+|+++|=| ++..+++..+..+|++|.+..+..-... + .....+++|++++||||..-.
T Consensus 174 l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~ 253 (359)
T 2w37_A 174 LQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDV 253 (359)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred cCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcc
Confidence 679999999996 9999999999999999988876432111 1 223578999999999998844
Q ss_pred CC--C---h-h-----hhhcchHHHHhcCC---CCcEEEEcC
Q 022233 229 GL--T---A-E-----THHMINKQVLSALG---KEGVVINIG 256 (300)
Q Consensus 229 p~--~---~-~-----t~~li~~~~l~~mk---~ga~lIn~s 256 (300)
=. . . + ..--++.+.++.+| ++++|.-+.
T Consensus 254 w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 254 WVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp SCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECS
T ss_pred cccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCC
Confidence 31 0 1 1 12345888999999 899999885
No 343
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.25 E-value=0.0061 Score=56.08 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=61.8
Q ss_pred CEEEEEecChhHHHHHHHHHhC---------CCEEE-EECCCCCCCCCC---cccCCHHHHhhcCCEEEEecCCChhhhh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF---------GCSIS-YNSRTKKPSVSY---PFYSNVCELAANCDILIICCGLTAETHH 236 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~---------g~~V~-~~~~~~~~~~~~---~~~~~l~e~l~~aDvV~l~~p~~~~t~~ 236 (300)
.+|||||+|.||+.+++.+... +++|. +++++.....+. ..+.++++++ +.|+|+.++|.......
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~~ 82 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVEAPLR 82 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcHHHHH
Confidence 3899999999999999998765 45664 567765433221 2345778888 99999999986532121
Q ss_pred cchHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHhC
Q 022233 237 MINKQVLSALGKEGVVINIGRGPI-IDEQELVRCLVQG 273 (300)
Q Consensus 237 li~~~~l~~mk~ga~lIn~srg~~-vd~~aL~~aL~~~ 273 (300)
. ..+.++.|--+|-..-..+ ...++|.++.++.
T Consensus 83 ~----~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 83 L----VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H----HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H----HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 1 1233445544444322222 2456666666655
No 344
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.24 E-value=0.026 Score=53.71 Aligned_cols=105 Identities=18% Similarity=0.277 Sum_probs=69.9
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEE-EECCCCC---C-C----------------CCC--cccCCHHHHh-h
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSIS-YNSRTKK---P-S----------------VSY--PFYSNVCELA-A 219 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~-~~~~~~~---~-~----------------~~~--~~~~~l~e~l-~ 219 (300)
|.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+.. + . .++ ....+.++++ .
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 446889999999999999999999999999987 5554310 0 0 000 0122445655 4
Q ss_pred cCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 220 NCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 220 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
.||+++-|.. .+.|+.+-...++ ..+++-.+-+++- .+ -.+.|.+++|.
T Consensus 310 ~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~e-A~~iL~~~GI~ 358 (440)
T 3aog_A 310 PVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PA-ADDILLEKGVL 358 (440)
T ss_dssp CCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HH-HHHHHHHHTCE
T ss_pred CCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HH-HHHHHHHCCCE
Confidence 7999998854 3446666666663 5677888888764 33 34566666664
No 345
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.24 E-value=0.029 Score=51.56 Aligned_cols=98 Identities=11% Similarity=0.089 Sum_probs=71.1
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEecC
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~p 229 (300)
+.|.+|++||= +++.++.+..+..+|++|.+..+..-... + .....+++|+++++|||..-.=
T Consensus 177 l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 177 FKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVW 256 (340)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCc
Confidence 77999999997 57888888899999999988776432111 1 2235689999999999987542
Q ss_pred CC------hh-----hhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 230 LT------AE-----THHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 230 ~~------~~-----t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
-. ++ ..--++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 257 ~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 305 (340)
T 4ep1_A 257 MSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGE 305 (340)
T ss_dssp ------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred cCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 21 01 11346889999999999999997 77655543
No 346
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.22 E-value=0.0077 Score=54.09 Aligned_cols=65 Identities=15% Similarity=0.101 Sum_probs=48.4
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCC--------------------CCCCcccCCHHHHhhcCCEE
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKP--------------------SVSYPFYSNVCELAANCDIL 224 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~--------------------~~~~~~~~~l~e~l~~aDvV 224 (300)
.+.|++|.|.|. |.||+.+++.|...|++|.+.+|+... ........+++++++..|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 367899999998 999999999999999999988875321 00111223556777889999
Q ss_pred EEecCC
Q 022233 225 IICCGL 230 (300)
Q Consensus 225 ~l~~p~ 230 (300)
+.+...
T Consensus 88 ih~A~~ 93 (342)
T 1y1p_A 88 AHIASV 93 (342)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 887653
No 347
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.22 E-value=0.0077 Score=56.98 Aligned_cols=61 Identities=21% Similarity=0.379 Sum_probs=46.3
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----------CCcccCCHHHHhhcCCEEEE
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----------SYPFYSNVCELAANCDILII 226 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----------~~~~~~~l~e~l~~aDvV~l 226 (300)
-+.|++|+|+|-|.+|+.+++.++.+|++|.++++++.... .......+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 36799999999999999999999999999999987654310 11112245567788999884
No 348
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.17 E-value=0.015 Score=53.51 Aligned_cols=37 Identities=24% Similarity=0.519 Sum_probs=33.2
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCC
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRT 201 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~ 201 (300)
..|++++|.|||+|.+|..+|+.|...|. +++++|..
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46899999999999999999999999998 78887764
No 349
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.16 E-value=0.0056 Score=56.69 Aligned_cols=83 Identities=11% Similarity=0.139 Sum_probs=52.2
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCC-CEEEEEC--CCCCCC-C----C-------------Ccc-cCCHHHHhh-cCCEEE
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFG-CSISYNS--RTKKPS-V----S-------------YPF-YSNVCELAA-NCDILI 225 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g-~~V~~~~--~~~~~~-~----~-------------~~~-~~~l~e~l~-~aDvV~ 225 (300)
.+|+|+| .|.||+.+++.|.... ++|.... +..... . + ... ..+++++++ ++|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4899999 9999999999998765 5776553 221110 0 0 000 014455556 899999
Q ss_pred EecCCChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 226 ICCGLTAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 226 l~~p~~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
+|+|.....+ +-..+ ++.|..+|+.+-
T Consensus 89 ~atp~~~~~~--~a~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDLAKK--FEPEF---AKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHHHHH--HHHHH---HHTTCEEEECCS
T ss_pred ECCCchHHHH--HHHHH---HHCCCEEEECCc
Confidence 9998543222 11222 356888999874
No 350
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.16 E-value=0.033 Score=50.86 Aligned_cols=98 Identities=20% Similarity=0.230 Sum_probs=70.5
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEecC
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~p 229 (300)
+.|.+|++||= +++..+.+..+..+|++|.+..+..-... + .....+++|+++++|||..-.=
T Consensus 155 l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 155 LAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVW 234 (323)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEece
Confidence 67999999996 57888899899999999988776432111 1 2345789999999999987542
Q ss_pred CCh--h----------hhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 230 LTA--E----------THHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 230 ~~~--~----------t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
-.. + ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 235 qs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~e 284 (323)
T 3gd5_A 235 TSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDE 284 (323)
T ss_dssp C---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred ecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCHH
Confidence 111 0 11246899999999999999885 67555543
No 351
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.14 E-value=0.0095 Score=53.75 Aligned_cols=67 Identities=12% Similarity=-0.014 Sum_probs=49.8
Q ss_pred ccccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-------CC-------cccCCHHHHhh--cCCEEEE
Q 022233 164 GSKLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-------SY-------PFYSNVCELAA--NCDILII 226 (300)
Q Consensus 164 g~~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-------~~-------~~~~~l~e~l~--~aDvV~l 226 (300)
...+.||+|.|.|. |.||+.+++.|...|++|.+.+|+..... .. ....+++++++ ..|+|+.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 34688999999997 99999999999999999999888543211 11 11123556777 8999988
Q ss_pred ecCC
Q 022233 227 CCGL 230 (300)
Q Consensus 227 ~~p~ 230 (300)
+...
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 7754
No 352
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.12 E-value=0.0054 Score=52.83 Aligned_cols=64 Identities=20% Similarity=0.152 Sum_probs=45.8
Q ss_pred CCEEEEEecChhHHHHHHHH--HhCCCEEE-EECCCCC-CC-----CCCc--ccCCHHHHhhc--CCEEEEecCCCh
Q 022233 169 GKRVGIVGLGSIGSLVAKRL--DAFGCSIS-YNSRTKK-PS-----VSYP--FYSNVCELAAN--CDILIICCGLTA 232 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l--~~~g~~V~-~~~~~~~-~~-----~~~~--~~~~l~e~l~~--aDvV~l~~p~~~ 232 (300)
..+++|+|.|++|+++++.+ ...|+++. ++|.++. .. .+.. ..+++++++++ .|++++++|...
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~~ 160 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTE 160 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCchh
Confidence 45899999999999999973 45688875 5676655 21 1222 23577888764 899999999654
No 353
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.11 E-value=0.11 Score=47.18 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=71.2
Q ss_pred cC-CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEec
Q 022233 167 LG-GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 167 l~-g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~ 228 (300)
+. |.+|++||= +++..+.+..+..+|++|.+..+..-... + .....+++|+++++|+|..-.
T Consensus 143 l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~ 222 (307)
T 3tpf_A 143 QNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDT 222 (307)
T ss_dssp GGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecC
Confidence 77 999999996 57888888899999999988776432111 1 123468999999999998865
Q ss_pred C--CCh--h--------hhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 229 G--LTA--E--------THHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 229 p--~~~--~--------t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
= ... + ..--++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 223 w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 223 WVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp SSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred cccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 1 111 1 12346889999999999999986 67656554
No 354
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.11 E-value=0.011 Score=56.67 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=69.7
Q ss_pred CCEEEEEecChh-HHHHHHHHHh--C---CCEEEEECCCC--CCC---------------CCC--cccCCHHHHhhcCCE
Q 022233 169 GKRVGIVGLGSI-GSLVAKRLDA--F---GCSISYNSRTK--KPS---------------VSY--PFYSNVCELAANCDI 223 (300)
Q Consensus 169 g~~vgIiG~G~I-G~~~A~~l~~--~---g~~V~~~~~~~--~~~---------------~~~--~~~~~l~e~l~~aDv 223 (300)
.++|+|||.|.. |.+++..|.. . +.+|..||+.. +.. ... ....++.+++++||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 468999999999 8887776665 2 45799999977 321 011 123578899999999
Q ss_pred EEEecCCChh---hh----------------------------hcch--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 022233 224 LIICCGLTAE---TH----------------------------HMIN--KQVLSALGKEGVVINIGRGPIIDEQELVRCL 270 (300)
Q Consensus 224 V~l~~p~~~~---t~----------------------------~li~--~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL 270 (300)
|++++|.... ++ .++. .+......|++++||.+-.--+-+.++.+..
T Consensus 87 VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~ 166 (450)
T 1s6y_A 87 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYT 166 (450)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHC
T ss_pred EEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999995421 11 0110 1223334689999999876545555555543
Q ss_pred HhCCceEE
Q 022233 271 VQGEIKGA 278 (300)
Q Consensus 271 ~~~~i~~a 278 (300)
...++.|.
T Consensus 167 p~~rViG~ 174 (450)
T 1s6y_A 167 KQEKVVGL 174 (450)
T ss_dssp CCCCEEEC
T ss_pred CCCCEEEe
Confidence 22255443
No 355
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.11 E-value=0.01 Score=54.61 Aligned_cols=98 Identities=12% Similarity=0.204 Sum_probs=63.5
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC--------C-----C---cccCCHHHHhhcCCEEEEe
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV--------S-----Y---PFYSNVCELAANCDILIIC 227 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~--------~-----~---~~~~~l~e~l~~aDvV~l~ 227 (300)
....++|+|||.|.||..+|..+...|. +|..+|.+.+... . . ....+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999999988787 8999998653210 0 0 1123444 59999999998
Q ss_pred cCCCh---hhh-hcch--H-------HHHhcCCCCcEEEEcCCCcccCHHHH
Q 022233 228 CGLTA---ETH-HMIN--K-------QVLSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 228 ~p~~~---~t~-~li~--~-------~~l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
..... .++ .++. . +.+....|++++++++ .++|.-..
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvdi~t~ 144 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS--NPVDILTY 144 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHHHHH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec--ChHHHHHH
Confidence 64321 122 1221 1 1233347899999998 45664443
No 356
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.09 E-value=0.019 Score=54.36 Aligned_cols=105 Identities=15% Similarity=0.285 Sum_probs=64.6
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEE-EECCCCC----C---CCCC--------------------cccCCHH
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSIS-YNSRTKK----P---SVSY--------------------PFYSNVC 215 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~-~~~~~~~----~---~~~~--------------------~~~~~l~ 215 (300)
|.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+.+ . ..+. ....+.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 446889999999999999999999999999987 4555521 0 0000 0011123
Q ss_pred HHh-hcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 216 ELA-ANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 216 e~l-~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
+++ ..||+++-|.+ .+.|+.+-...+ +..+++-.+-+++- .+ -.+.|++++|.
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t-~e-a~~il~~~GI~ 340 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT-PE-GDKVLTERGIN 340 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC-HH-HHHHHHHHTCE
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC-HH-HHHHHHHCCCE
Confidence 333 36898888753 445777777777 46678888888864 33 34556666664
No 357
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.07 E-value=0.006 Score=58.24 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=69.1
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC---------CCCccc--CCHHHHhhc-CCEEEEe--cCC-
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS---------VSYPFY--SNVCELAAN-CDILIIC--CGL- 230 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~---------~~~~~~--~~l~e~l~~-aDvV~l~--~p~- 230 (300)
++.|++|.|||+|..|.++|+.|+..|++|.++|...... .+.... ...++++.+ +|+|++. +|.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 4679999999999999999999999999999999864211 122211 123345666 8999886 332
Q ss_pred Chhhh-------hcchH-HHHhcCCCC-cEEEEcCCCcccCHHHHHHHHHhCCc
Q 022233 231 TAETH-------HMINK-QVLSALGKE-GVVINIGRGPIIDEQELVRCLVQGEI 275 (300)
Q Consensus 231 ~~~t~-------~li~~-~~l~~mk~g-a~lIn~srg~~vd~~aL~~aL~~~~i 275 (300)
+|... .++.+ +++..+.+. .+-|-=+.|..--..-+...|+....
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 22211 13333 334333333 33444457776666667777776543
No 358
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.07 E-value=0.0081 Score=54.36 Aligned_cols=67 Identities=12% Similarity=0.078 Sum_probs=46.8
Q ss_pred ccccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC------CCcccCCHHHHhhcCCEEEEecCC
Q 022233 164 GSKLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV------SYPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 164 g~~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------~~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
.....+|+|.|.|. |.||+.+++.|...|++|.+.+|+..... ......++.++++++|+|+.+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 34688999999998 99999999999999999999988764311 111223566788999999877654
No 359
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.06 E-value=0.0063 Score=55.73 Aligned_cols=86 Identities=24% Similarity=0.399 Sum_probs=60.9
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc-cCCHHHHhhcCCEEEEecCCChhhhhcchHHH
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF-YSNVCELAANCDILIICCGLTAETHHMINKQV 242 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~-~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~ 242 (300)
|.+|.|+|.|.||...++.++.+|.+|++.+++++.. .++.. ..+.+++.+..|+|+-++..... -...
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~-----~~~~ 251 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYD-----LKDY 251 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCC-----HHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHH-----HHHH
Confidence 7799999999999999999999999999988776542 12221 12333333468999988764422 2456
Q ss_pred HhcCCCCcEEEEcCCCc
Q 022233 243 LSALGKEGVVINIGRGP 259 (300)
Q Consensus 243 l~~mk~ga~lIn~srg~ 259 (300)
+..++++..++.++...
T Consensus 252 ~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 252 LKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HTTEEEEEEEEECCCCC
T ss_pred HHHHhcCCEEEEECCCC
Confidence 67788888888876433
No 360
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.04 E-value=0.0031 Score=56.43 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=33.1
Q ss_pred cCCCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCC
Q 022233 167 LGGKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 167 l~g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
+.|+++.|+| .|.||+++++.|...|++|++.+|+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 5689999999 99999999999999999999998864
No 361
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.04 E-value=0.012 Score=51.92 Aligned_cols=62 Identities=13% Similarity=0.135 Sum_probs=46.8
Q ss_pred CEEEEEe-cChhHHHHHHHHHhC-CCEEEEECCCCCCCC-----C-------CcccCCHHHHhhcCCEEEEecCCC
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAF-GCSISYNSRTKKPSV-----S-------YPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~-g~~V~~~~~~~~~~~-----~-------~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
|+|.|.| .|.||+.+++.|... |.+|.+..|++.... + .....++.++++.+|+|+.+....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 4789999 599999999999987 899999888754321 1 112235677899999999887643
No 362
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=96.03 E-value=0.013 Score=53.52 Aligned_cols=94 Identities=18% Similarity=0.244 Sum_probs=60.3
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCC--CEEEEECCCCCCC--------C-C--Ccc---cCCHHHHhhcCCEEEEecCCC
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFG--CSISYNSRTKKPS--------V-S--YPF---YSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g--~~V~~~~~~~~~~--------~-~--~~~---~~~l~e~l~~aDvV~l~~p~~ 231 (300)
.++|+|+| .|.+|..++..|...| .+|..+|+.+... . . ... ..++.+++++||+|+++.+..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 46999999 8999999999998878 6888888654310 0 1 011 125678899999999998633
Q ss_pred hh---hh-hc------chHHHH---hcCCCCcEEEEcCCCcccCHH
Q 022233 232 AE---TH-HM------INKQVL---SALGKEGVVINIGRGPIIDEQ 264 (300)
Q Consensus 232 ~~---t~-~l------i~~~~l---~~mk~ga~lIn~srg~~vd~~ 264 (300)
.. ++ .+ +-.++. ....+.+++++.+ .++|.-
T Consensus 88 ~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~~ 131 (326)
T 1smk_A 88 RKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNST 131 (326)
T ss_dssp CCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHHH
Confidence 21 00 00 111222 2235778888874 567763
No 363
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.03 E-value=0.01 Score=56.79 Aligned_cols=93 Identities=14% Similarity=0.219 Sum_probs=66.4
Q ss_pred cccCCCEEEEEecC----------hhHHHHHHHHHhCCCEEEEECCCCCCC----CC--CcccCCHHHHhhcCCEEEEec
Q 022233 165 SKLGGKRVGIVGLG----------SIGSLVAKRLDAFGCSISYNSRTKKPS----VS--YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 165 ~~l~g~~vgIiG~G----------~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~--~~~~~~l~e~l~~aDvV~l~~ 228 (300)
..+.|++|+|+|+- .=...+++.|...|.+|.+||+...+. .+ .....+++++++.+|.|++++
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t 393 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVT 393 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEECS
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEcc
Confidence 34789999999984 346889999999999999999875321 11 234468889999999999998
Q ss_pred CCChhhhhcchHHHHhcCCCCcEEEEcCCCcc
Q 022233 229 GLTAETHHMINKQVLSALGKEGVVINIGRGPI 260 (300)
Q Consensus 229 p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 260 (300)
.-.+ -+.+=-..+.+.|+ +.+++|+ |+-+
T Consensus 394 ~~~~-f~~~~~~~~~~~~~-~~~i~D~-r~~~ 422 (450)
T 3gg2_A 394 EWKE-FRMPDWSALSQAMA-ASLVIDG-RNVY 422 (450)
T ss_dssp CCGG-GSSCCHHHHHHHSS-SCEEEES-SCCC
T ss_pred CCHH-HhhcCHHHHHHhcC-CCEEEEC-CCCC
Confidence 6443 33222234455576 5689996 6543
No 364
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.01 E-value=0.013 Score=54.29 Aligned_cols=64 Identities=11% Similarity=0.110 Sum_probs=46.0
Q ss_pred CEEEEEe-cChhHHH-HH----HHHHhCC-CEE----------EEECCCCCCC------CCC-cccCCHHHHhhc--CCE
Q 022233 170 KRVGIVG-LGSIGSL-VA----KRLDAFG-CSI----------SYNSRTKKPS------VSY-PFYSNVCELAAN--CDI 223 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~-~A----~~l~~~g-~~V----------~~~~~~~~~~------~~~-~~~~~l~e~l~~--aDv 223 (300)
.+||||| +|.||+. .+ +.++..+ ..+ .+++++++.. .+. ..+.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4899999 9999998 66 6666544 232 3788876532 133 346899999976 899
Q ss_pred EEEecCCChh
Q 022233 224 LIICCGLTAE 233 (300)
Q Consensus 224 V~l~~p~~~~ 233 (300)
|++++|....
T Consensus 87 V~i~tp~~~h 96 (383)
T 3oqb_A 87 FFDAATTQAR 96 (383)
T ss_dssp EEECSCSSSS
T ss_pred EEECCCchHH
Confidence 9999996543
No 365
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.00 E-value=0.031 Score=51.22 Aligned_cols=99 Identities=13% Similarity=0.175 Sum_probs=71.3
Q ss_pred ccCCCEEEEEecC--hhHHHHHHHHHhCCCEEEEECCCCCC---C---------------CC--CcccCCHHHHhhcCCE
Q 022233 166 KLGGKRVGIVGLG--SIGSLVAKRLDAFGCSISYNSRTKKP---S---------------VS--YPFYSNVCELAANCDI 223 (300)
Q Consensus 166 ~l~g~~vgIiG~G--~IG~~~A~~l~~~g~~V~~~~~~~~~---~---------------~~--~~~~~~l~e~l~~aDv 223 (300)
.+.|.+|++||=| ++.++.+..+..+|++|.+..+..-. . .+ .....+++|+++++||
T Consensus 158 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 158 GFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp TGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred ccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 4789999999986 88999999999999999887764321 1 12 2245789999999999
Q ss_pred EEEe----cCCChh---------hhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 224 LIIC----CGLTAE---------THHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 224 V~l~----~p~~~~---------t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
|..- +...++ ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~e 294 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTAS 294 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHH
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCHH
Confidence 9863 221111 12346889999999999999886 67655543
No 366
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.99 E-value=0.0056 Score=56.41 Aligned_cols=84 Identities=20% Similarity=0.152 Sum_probs=51.5
Q ss_pred CEEEEEecChhHHHHHHHHHh-CCCEEEE-ECCCCCCC------CC------------------CcccCCHHHHhhcCCE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDA-FGCSISY-NSRTKKPS------VS------------------YPFYSNVCELAANCDI 223 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~-~g~~V~~-~~~~~~~~------~~------------------~~~~~~l~e~l~~aDv 223 (300)
.+|||+|+|.||+.+++.|.. -++++.+ .++.+... .+ .....+.++++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 389999999999999999986 4567754 44432210 00 0001256677889999
Q ss_pred EEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 224 LIICCGLTAETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 224 V~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
|+.|+|.....+ +-..++ +.|..+|+.+-.
T Consensus 82 V~~atp~~~~~~--~a~~~l---~aG~~VId~sp~ 111 (337)
T 1cf2_P 82 VIDCTPEGIGAK--NLKMYK---EKGIKAIFQGGE 111 (337)
T ss_dssp EEECCSTTHHHH--HHHHHH---HHTCCEEECTTS
T ss_pred EEECCCchhhHH--HHHHHH---HcCCEEEEecCC
Confidence 999998654333 222333 334445555443
No 367
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=95.97 E-value=0.01 Score=53.12 Aligned_cols=95 Identities=15% Similarity=0.185 Sum_probs=62.9
Q ss_pred ccccCCCEEEEEecC---hhHHHHHHHHHhCCCEEEEECCCCCCCC-----------------CCcccCCHHHHhh----
Q 022233 164 GSKLGGKRVGIVGLG---SIGSLVAKRLDAFGCSISYNSRTKKPSV-----------------SYPFYSNVCELAA---- 219 (300)
Q Consensus 164 g~~l~g~~vgIiG~G---~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----------------~~~~~~~l~e~l~---- 219 (300)
...+.||++.|.|.+ .||+.+|+.|...|++|.+.+|+..... ......+++++++
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 346899999999986 8999999999999999998888743210 0111123334443
Q ss_pred ---cCCEEEEecCCChh--------------hhhc----------chHHHHhcCCCCcEEEEcCCC
Q 022233 220 ---NCDILIICCGLTAE--------------THHM----------INKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 220 ---~aDvV~l~~p~~~~--------------t~~l----------i~~~~l~~mk~ga~lIn~srg 258 (300)
.-|+++.+.-.... .... +.+..+..|+++..|||+|..
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~ 170 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY 170 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence 56999987643211 0111 124456778888899998764
No 368
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.95 E-value=0.094 Score=49.55 Aligned_cols=105 Identities=20% Similarity=0.269 Sum_probs=70.9
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHh-CCCEEE-EECCCCC---C-----------------CCCC--cccCCHHHHh-
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDA-FGCSIS-YNSRTKK---P-----------------SVSY--PFYSNVCELA- 218 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~-~g~~V~-~~~~~~~---~-----------------~~~~--~~~~~l~e~l- 218 (300)
|.++.|++|.|.|+|++|+..|+.|.. .|.+|+ +.|.+.. + ..++ ....+.++++
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~ 283 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE 283 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc
Confidence 456899999999999999999999998 999987 5554310 0 0000 0112445655
Q ss_pred hcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 219 ANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 219 ~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
..||+++-|.. .+.|+.+-...++ ..+++-.+-+++- .++ .+.|.+++|.
T Consensus 284 ~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~a-~~~l~~~Gi~ 333 (415)
T 2tmg_A 284 LDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PEA-DEILSRRGIL 333 (415)
T ss_dssp CSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HHH-HHHHHHTTCE
T ss_pred CCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HHH-HHHHHHCCCE
Confidence 47999998864 3447777777774 5577777777753 433 4566776664
No 369
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.94 E-value=0.012 Score=53.67 Aligned_cols=106 Identities=19% Similarity=0.165 Sum_probs=67.5
Q ss_pred CCEEEEEecChhHHH-HHHHHHhCCCEEEEECCCCCCC-------CCCccc--CCHHHHh-hcCCEEEEe--cC-CChhh
Q 022233 169 GKRVGIVGLGSIGSL-VAKRLDAFGCSISYNSRTKKPS-------VSYPFY--SNVCELA-ANCDILIIC--CG-LTAET 234 (300)
Q Consensus 169 g~~vgIiG~G~IG~~-~A~~l~~~g~~V~~~~~~~~~~-------~~~~~~--~~l~e~l-~~aDvV~l~--~p-~~~~t 234 (300)
.++|.|||.|.+|.+ +|+.|+..|++|.++|....+. .+.... .+.+++. .++|+|+.. +| .+|..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 579999999999996 9999999999999999865421 122211 2344444 579999986 33 23332
Q ss_pred h-------hcchH-HHHhc--CCCC-cEEEEcCCCcccCHHHHHHHHHhCC
Q 022233 235 H-------HMINK-QVLSA--LGKE-GVVINIGRGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 235 ~-------~li~~-~~l~~--mk~g-a~lIn~srg~~vd~~aL~~aL~~~~ 274 (300)
. .++.+ +++.. ++.. .+-|-=+.|..--..-+...|++..
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 2 13332 33443 3322 3445556788777777777887654
No 370
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=95.94 E-value=0.023 Score=53.78 Aligned_cols=105 Identities=24% Similarity=0.353 Sum_probs=71.8
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEE-EECCCCC---C-------------CCC-C----cccCCHHHHh-hc
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSIS-YNSRTKK---P-------------SVS-Y----PFYSNVCELA-AN 220 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~-~~~~~~~---~-------------~~~-~----~~~~~l~e~l-~~ 220 (300)
|.++.|+||.|-|+|++|+..|+.|...|.+|+ +.|.+.. + ..+ . ....+.++++ ..
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 456899999999999999999999999999975 5555410 0 001 0 1122445644 56
Q ss_pred CCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 221 CDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 221 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
||+++=|.. .+.|+.+-...++ -.+++-.+-+++ .. +-.+.|+++.|.
T Consensus 296 ~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t~-eA~~iL~~rGI~ 343 (424)
T 3k92_A 296 CDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-TI-DATKILNERGVL 343 (424)
T ss_dssp CSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-CH-HHHHHHHHTTCE
T ss_pred ccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-CH-HHHHHHHHCCCE
Confidence 999987754 3557766666674 567788888885 33 445777777774
No 371
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.91 E-value=0.017 Score=55.94 Aligned_cols=62 Identities=19% Similarity=0.236 Sum_probs=47.9
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCCCC--cccCCHHHHhhcCCEEEEecCC
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSVSY--PFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~--~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
+|+|.|.| .|.||+.+++.|...|++|++.+|+....... .....+.+++.++|+|+.+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCC
Confidence 78999999 69999999999999999999998876543211 1123456778899999877653
No 372
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.91 E-value=0.016 Score=51.81 Aligned_cols=62 Identities=18% Similarity=0.196 Sum_probs=45.3
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCC-CC-------------CCCC-------cccCCHHHHhhcCCEEEE
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTK-KP-------------SVSY-------PFYSNVCELAANCDILII 226 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~-~~-------------~~~~-------~~~~~l~e~l~~aDvV~l 226 (300)
.++|.|.|. |.||+.+++.|...|++|.+.+|+. .. ..+. ....++.++++++|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999995 9999999999999999999888875 11 0111 112346677888888887
Q ss_pred ecCC
Q 022233 227 CCGL 230 (300)
Q Consensus 227 ~~p~ 230 (300)
+...
T Consensus 84 ~a~~ 87 (321)
T 3c1o_A 84 ALPF 87 (321)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 7653
No 373
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.90 E-value=0.0041 Score=57.44 Aligned_cols=88 Identities=24% Similarity=0.420 Sum_probs=62.4
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCC---CCC-----CCCcccC--CHHHHh----hcCCEEEEecCCC
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTK---KPS-----VSYPFYS--NVCELA----ANCDILIICCGLT 231 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~---~~~-----~~~~~~~--~l~e~l----~~aDvV~l~~p~~ 231 (300)
.+.|++|.|+|.|.||..+++.++.+|++|++.+++. +.. .++...+ ++.+.+ ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 4679999999999999999999999999999988876 321 1222110 111222 3589999998754
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
... + ...+..|+++..+|+++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 322 0 456788899999999874
No 374
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.89 E-value=0.023 Score=52.47 Aligned_cols=85 Identities=18% Similarity=0.258 Sum_probs=61.3
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc----c---CCHHHHhh-----cCCEEEEecC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF----Y---SNVCELAA-----NCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~l~-----~aDvV~l~~p 229 (300)
.|.+|.|+|.|.||...++.++.+|. +|++.+++++.. .++.. . .++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 37899999999999999999999999 899988765432 12211 1 23444333 4899999886
Q ss_pred CChhhhhcchHHHHhcCCCC-cEEEEcCC
Q 022233 230 LTAETHHMINKQVLSALGKE-GVVINIGR 257 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~g-a~lIn~sr 257 (300)
..+. -...+..++++ ..+|.++-
T Consensus 272 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NVGV-----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEEcC
Confidence 4222 24567889998 88888864
No 375
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.89 E-value=0.025 Score=50.52 Aligned_cols=61 Identities=20% Similarity=0.230 Sum_probs=44.4
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC---------CCC-------cccCCHHHHhhcCCEEEEecC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS---------VSY-------PFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~---------~~~-------~~~~~l~e~l~~aDvV~l~~p 229 (300)
.++|.|.|. |.||+.+++.|...|++|.+.+|+.... .+. ....++.++++++|+|+.+.+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 358999995 9999999999999999999888875311 111 112345667778888877665
No 376
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.88 E-value=0.022 Score=52.53 Aligned_cols=85 Identities=22% Similarity=0.224 Sum_probs=60.8
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc----c---CCHHHHhh-----cCCEEEEecC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF----Y---SNVCELAA-----NCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~l~-----~aDvV~l~~p 229 (300)
.|.+|.|+|.|.||...++.++.+|. +|++.+++++.. .++.. . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 37899999999999999999999999 899988765432 12221 1 23444333 4899999886
Q ss_pred CChhhhhcchHHHHhcCCCC-cEEEEcCC
Q 022233 230 LTAETHHMINKQVLSALGKE-GVVINIGR 257 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~g-a~lIn~sr 257 (300)
..+. -...++.++++ ..+|.++-
T Consensus 271 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RLDT-----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CHHH-----HHHHHHHBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEecc
Confidence 4222 24567788998 88888763
No 377
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.86 E-value=0.015 Score=52.85 Aligned_cols=82 Identities=16% Similarity=0.163 Sum_probs=51.9
Q ss_pred CEEEEEecChhHHHHHHHHHh--CCCEE-EEECCCCCC-C------CCCc-ccCCHHHHhh-----cCCEEEEecCCChh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDA--FGCSI-SYNSRTKKP-S------VSYP-FYSNVCELAA-----NCDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~--~g~~V-~~~~~~~~~-~------~~~~-~~~~l~e~l~-----~aDvV~l~~p~~~~ 233 (300)
.+|||||+|.||+.+++.+.. -++++ .+.+++++. . .+.. ...+.+++++ +.|+|++++|....
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~~h 84 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAH 84 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChHHH
Confidence 489999999999999999954 35665 467776544 1 1222 2346677764 47999999983322
Q ss_pred hhhcchHHHHhcCCCCcEEEE
Q 022233 234 THHMINKQVLSALGKEGVVIN 254 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn 254 (300)
.+ +....++. ++|..+++
T Consensus 85 ~~--~a~~al~a-~~Gk~Vi~ 102 (312)
T 1nvm_B 85 VQ--NEALLRQA-KPGIRLID 102 (312)
T ss_dssp HH--HHHHHHHH-CTTCEEEE
T ss_pred HH--HHHHHHHh-CCCCEEEE
Confidence 22 22222221 33777777
No 378
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.86 E-value=0.012 Score=56.50 Aligned_cols=106 Identities=20% Similarity=0.255 Sum_probs=73.0
Q ss_pred cCCCEEEEEecC----hhHHHHHHHHHhCC-CEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHH
Q 022233 167 LGGKRVGIVGLG----SIGSLVAKRLDAFG-CSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQ 241 (300)
Q Consensus 167 l~g~~vgIiG~G----~IG~~~A~~l~~~g-~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~ 241 (300)
++-++|+|||.+ ++|..+.+.|+..| ..|+..++......+...+.++.|+....|++++++|. +.+...+. +
T Consensus 6 ~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i~G~~~y~sl~~lp~~~Dlavi~vp~-~~~~~~v~-e 83 (457)
T 2csu_A 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPK-RFVKDTLI-Q 83 (457)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCH-HHHHHHHH-H
T ss_pred cCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeECCEeccCCHHHcCCCCCEEEEecCH-HHHHHHHH-H
Confidence 557899999998 89999999999885 67888887654444666678899988889999999984 33444443 2
Q ss_pred HHhcCCCCcEEEEcCCC--cccC-----HHHHHHHHHhCCce
Q 022233 242 VLSALGKEGVVINIGRG--PIID-----EQELVRCLVQGEIK 276 (300)
Q Consensus 242 ~l~~mk~ga~lIn~srg--~~vd-----~~aL~~aL~~~~i~ 276 (300)
..+. .-..+ |..+.| +.-+ ++++.+++++.++.
T Consensus 84 ~~~~-Gi~~v-v~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~ 123 (457)
T 2csu_A 84 CGEK-GVKGV-VIITAGFGETGEEGKREEKELVEIAHKYGMR 123 (457)
T ss_dssp HHHH-TCCEE-EECCCSSTTSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHc-CCCEE-EEecCCCCccccccHHHHHHHHHHHHHcCCE
Confidence 2222 22233 333333 2223 67788888876664
No 379
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.86 E-value=0.0029 Score=60.74 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=46.7
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CCC-------cccCCHHHH-hhcCCEEEEecCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VSY-------PFYSNVCEL-AANCDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~~-------~~~~~l~e~-l~~aDvV~l~~p~ 230 (300)
.|+|-|+|+|++|+.+|+.|...|++|++.|.+++.. .+. .....|+++ +++||+++.+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 5799999999999999999999999999998875431 111 122345555 7889988876653
No 380
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=95.85 E-value=0.033 Score=48.53 Aligned_cols=37 Identities=19% Similarity=0.400 Sum_probs=32.6
Q ss_pred ccCCCEEEEEec-Ch--hHHHHHHHHHhCCCEEEEECCCC
Q 022233 166 KLGGKRVGIVGL-GS--IGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~--IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
++.||++.|.|. |. ||+++|+.|...|++|+..+|+.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 578999999997 45 99999999999999999887764
No 381
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.85 E-value=0.017 Score=57.01 Aligned_cols=36 Identities=25% Similarity=0.543 Sum_probs=32.7
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECC
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSR 200 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~ 200 (300)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~ 359 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 359 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 56899999999999999999999999998 7888864
No 382
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=95.83 E-value=0.0089 Score=57.00 Aligned_cols=106 Identities=17% Similarity=0.269 Sum_probs=69.4
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCC---CCCCCc---------------------------ccCC
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKK---PSVSYP---------------------------FYSN 213 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~---~~~~~~---------------------------~~~~ 213 (300)
+.++.|+||.|=|+|++|+.+|+.|...|.+|+..+-+.- ...+.. .+.+
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 4468999999999999999999999999999875432110 000000 0001
Q ss_pred HHHH-hhcCCEEEEecCCChhhhhcchHHHHhcCCCC--cEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 214 VCEL-AANCDILIICCGLTAETHHMINKQVLSALGKE--GVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 214 l~e~-l~~aDvV~l~~p~~~~t~~li~~~~l~~mk~g--a~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
-+++ -..||+.+=|. +.+.|+.+....++.. .++++-+-+.+- .++ .+.|.++.|.
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t-~eA-~~iL~~rGIl 368 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTT-IEA-TELFQQAGVL 368 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBC-HHH-HHHHHHTTCE
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCC-HHH-HHHHHHCCCE
Confidence 1122 23699888774 4566888877777643 477888887754 333 3667777775
No 383
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.83 E-value=0.016 Score=57.28 Aligned_cols=73 Identities=23% Similarity=0.416 Sum_probs=51.3
Q ss_pred CeEEEeCCC-CCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcc-cccCCCEEEEEecChhHHHHH
Q 022233 108 GITVANAGN-VFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIG-SKLGGKRVGIVGLGSIGSLVA 185 (300)
Q Consensus 108 gI~v~n~p~-~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g-~~l~g~~vgIiG~G~IG~~~A 185 (300)
+-++.+-.. ......||...-+-|-++| -.-|. .+ | ..|++++|.|||+|.+|..+|
T Consensus 284 ~~~~~~l~~~~dp~~la~~~~~Lnlklm~----------wRllp------~~-----g~ekL~~arVLIVGaGGLGs~vA 342 (615)
T 4gsl_A 284 APRVVDLSSLLDPLKIADQSVDLNLKLMK----------WRILP------DL-----NLDIIKNTKVLLLGAGTLGCYVS 342 (615)
T ss_dssp CCEEEECHHHHCHHHHHHHHHHHHHHHHH----------HHTCT------TC-----CHHHHHTCEEEEECCSHHHHHHH
T ss_pred ceeEEeccccCCHHHHHhhhhhhhhHHHH----------Hhhcc------hh-----hHHHHhCCeEEEECCCHHHHHHH
Confidence 345555433 3566777777766554433 22333 11 3 368999999999999999999
Q ss_pred HHHHhCCC-EEEEECCC
Q 022233 186 KRLDAFGC-SISYNSRT 201 (300)
Q Consensus 186 ~~l~~~g~-~V~~~~~~ 201 (300)
+.|...|. +++.+|..
T Consensus 343 ~~La~aGVG~ItLvD~D 359 (615)
T 4gsl_A 343 RALIAWGVRKITFVDNG 359 (615)
T ss_dssp HHHHHTTCCEEEEECCC
T ss_pred HHHHHcCCCEEEEEcCC
Confidence 99999998 78888764
No 384
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.81 E-value=0.051 Score=50.22 Aligned_cols=87 Identities=23% Similarity=0.293 Sum_probs=57.2
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCC-EEEEECCCCCCC-----------CCCcc-cCCHHHHhhcCCEEEEecCCChhh
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----------VSYPF-YSNVCELAANCDILIICCGLTAET 234 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----------~~~~~-~~~l~e~l~~aDvV~l~~p~~~~t 234 (300)
-.+||||| .|..|+.+.++|..... ++.......... ..... ..+.++++.++|++++|+|...
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~-- 90 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGA-- 90 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTH--
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHH--
Confidence 45899997 69999999999998754 665443221110 01111 1245566688999999999553
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCCcccC
Q 022233 235 HHMINKQVLSALGKEGVVINIGRGPIID 262 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg~~vd 262 (300)
.++..+.+ .|..+||.|.-==.+
T Consensus 91 ----s~~~~~~~-~g~~VIDlSsdfRl~ 113 (351)
T 1vkn_A 91 ----SYDLVREL-KGVKIIDLGADFRFD 113 (351)
T ss_dssp ----HHHHHTTC-CSCEEEESSSTTTCS
T ss_pred ----HHHHHHHh-CCCEEEECChhhhCC
Confidence 34455566 899999998543333
No 385
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=95.81 E-value=0.081 Score=50.46 Aligned_cols=121 Identities=14% Similarity=0.227 Sum_probs=90.9
Q ss_pred CeEEEeCCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhCCCCCcccCCCccccCcccccCCCEEEEEecChhHHHHHHH
Q 022233 108 GITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKR 187 (300)
Q Consensus 108 gI~v~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~g~~l~g~~vgIiG~G~IG~~~A~~ 187 (300)
.|+|.|.. -.-+|=-+++-+++.+|-. |..|.+.+|.|.|.|.-|-.+|+.
T Consensus 187 ~ipvFnDD---~qGTA~V~lAgllnAlki~--------------------------gk~l~d~riV~~GAGaAGigia~l 237 (487)
T 3nv9_A 187 DIPVWHDD---QQGTASVTLAGLLNALKLV--------------------------KKDIHECRMVFIGAGSSNTTCLRL 237 (487)
T ss_dssp SSCEEETT---THHHHHHHHHHHHHHHHHH--------------------------TCCGGGCCEEEECCSHHHHHHHHH
T ss_pred cCCccccc---cchHHHHHHHHHHHHHHHh--------------------------CCChhhcEEEEECCCHHHHHHHHH
Confidence 79999985 3456777888888876631 455788899999999999999999
Q ss_pred HHhCCC---EEEEECCCC----CCC-C----------------CCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHH
Q 022233 188 LDAFGC---SISYNSRTK----KPS-V----------------SYPFYSNVCELAANCDILIICCGLTAETHHMINKQVL 243 (300)
Q Consensus 188 l~~~g~---~V~~~~~~~----~~~-~----------------~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l 243 (300)
+...|. +|+.+|+.. ... . ......+|.|+++.+|+++=.- .. ..++++++.+
T Consensus 238 l~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S-~~--~pg~ft~e~V 314 (487)
T 3nv9_A 238 IVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLS-TP--GPGVVKAEWI 314 (487)
T ss_dssp HHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECC-CS--SCCCCCHHHH
T ss_pred HHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEec-cc--CCCCCCHHHH
Confidence 999998 788887642 110 0 0012357999999999766542 11 1468999999
Q ss_pred hcCCCCcEEEEcCCCcc
Q 022233 244 SALGKEGVVINIGRGPI 260 (300)
Q Consensus 244 ~~mk~ga~lIn~srg~~ 260 (300)
+.|.+..++.-.|....
T Consensus 315 ~~Ma~~PIIFaLSNPtp 331 (487)
T 3nv9_A 315 KSMGEKPIVFCCANPVP 331 (487)
T ss_dssp HTSCSSCEEEECCSSSC
T ss_pred HhhcCCCEEEECCCCCc
Confidence 99999999999997765
No 386
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=95.81 E-value=0.12 Score=47.54 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=69.7
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEec
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~ 228 (300)
.+.|.+|++||= +++..+++..+..+|++|.+..+..-... + .....+++ +++++|||..-+
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 477999999996 67888999999999999988776432111 1 22346888 999999999733
Q ss_pred --CC-----C-hh----h--hhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 229 --GL-----T-AE----T--HHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 229 --p~-----~-~~----t--~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
.. . .+ . .--++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 251 w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcLPa~Rg~EIt~e 303 (339)
T 4a8t_A 251 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 303 (339)
T ss_dssp SSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred cccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 11 0 11 1 1346888899999999999886 66555543
No 387
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=95.81 E-value=0.016 Score=52.72 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=66.7
Q ss_pred cCCCEEEEEecC---hhHHHHHHHHHhCCCEEEEECCCCCCCC----------CC--cccCCHHHHhhcCCEEEEecCCC
Q 022233 167 LGGKRVGIVGLG---SIGSLVAKRLDAFGCSISYNSRTKKPSV----------SY--PFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 167 l~g~~vgIiG~G---~IG~~~A~~l~~~g~~V~~~~~~~~~~~----------~~--~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
+.|.+|+++|=| ++.++++..+..+|++|.+..+..-... +. ....+++++++++|+|..-.=-.
T Consensus 153 l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~ 232 (308)
T 1ml4_A 153 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQK 232 (308)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCG
T ss_pred CCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccc
Confidence 679999999984 8999999999999999988876432111 22 23478999999999998854211
Q ss_pred ------hhh-----hhcchHHHHhcCCCCcEEEEcC
Q 022233 232 ------AET-----HHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 232 ------~~t-----~~li~~~~l~~mk~ga~lIn~s 256 (300)
++- .--++.+.++.+|++++|.-+.
T Consensus 233 er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 233 ERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred cccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 111 1235778888889999988875
No 388
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.79 E-value=0.025 Score=52.20 Aligned_cols=85 Identities=20% Similarity=0.244 Sum_probs=60.6
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc----c---CCHHHHhh-----cCCEEEEecC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF----Y---SNVCELAA-----NCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~l~-----~aDvV~l~~p 229 (300)
.|.+|.|+|.|.||...++.++.+|. +|++.+++++.. .++.. . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 37899999999999999999999999 899988765432 13221 1 23444332 5899999886
Q ss_pred CChhhhhcchHHHHhcCCCC-cEEEEcCC
Q 022233 230 LTAETHHMINKQVLSALGKE-GVVINIGR 257 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~g-a~lIn~sr 257 (300)
..+. -...+..++++ ..+|.++-
T Consensus 271 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RIET-----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECCC
T ss_pred CHHH-----HHHHHHHHhcCCCEEEEEcc
Confidence 4222 24567888998 88888763
No 389
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.79 E-value=0.018 Score=51.95 Aligned_cols=38 Identities=32% Similarity=0.441 Sum_probs=33.3
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCC
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTK 202 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~ 202 (300)
..|++++|.|||+|.+|..+|+.|...|. ++.++|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 35899999999999999999999999997 788887543
No 390
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.78 E-value=0.011 Score=54.11 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=60.2
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc------cCCHHHHhh-----cCCEEEEecCCC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF------YSNVCELAA-----NCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~------~~~l~e~l~-----~aDvV~l~~p~~ 231 (300)
|++|.|+|. |.||..+++.++..|++|++.+++.+.. .+... ..++.+.+. ..|+|+.++...
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~ 249 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSE 249 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSCH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCcH
Confidence 789999999 8999999999999999999888765421 12111 134444443 479999887632
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
+. ....+..|+++..+|+++.
T Consensus 250 ~~-----~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 250 AA-----IEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HH-----HHHHTTSEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHhcCCEEEEEeC
Confidence 22 2456778888888888874
No 391
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.75 E-value=0.023 Score=52.36 Aligned_cols=85 Identities=22% Similarity=0.245 Sum_probs=60.9
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc----c---CCHHHHhh-----cCCEEEEecC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF----Y---SNVCELAA-----NCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~l~-----~aDvV~l~~p 229 (300)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++++.. .++.. . .++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 37899999999999999999999999 899988765532 12211 1 23444333 4899999886
Q ss_pred CChhhhhcchHHHHhcCCCC-cEEEEcCC
Q 022233 230 LTAETHHMINKQVLSALGKE-GVVINIGR 257 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~g-a~lIn~sr 257 (300)
..+. -...++.++++ ..+|.++-
T Consensus 270 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVKV-----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred cHHH-----HHHHHHhhccCCcEEEEEec
Confidence 4222 24567889998 88888863
No 392
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.75 E-value=0.028 Score=51.95 Aligned_cols=85 Identities=16% Similarity=0.188 Sum_probs=60.4
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc----c---CCHHHHhh-----cCCEEEEecC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF----Y---SNVCELAA-----NCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~l~-----~aDvV~l~~p 229 (300)
.|.+|.|+|.|.||...++.++.+|. +|++.+++++.. .++.. . .++.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 37899999999999999999999999 899988765532 12221 1 23444332 5899999876
Q ss_pred CChhhhhcchHHHHhcCCCC-cEEEEcCC
Q 022233 230 LTAETHHMINKQVLSALGKE-GVVINIGR 257 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~g-a~lIn~sr 257 (300)
..+. -...++.++++ ..+|.++-
T Consensus 275 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TAQT-----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECCC
T ss_pred CHHH-----HHHHHHHhhcCCCEEEEECC
Confidence 3222 24567888998 88887763
No 393
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.74 E-value=0.065 Score=49.56 Aligned_cols=93 Identities=9% Similarity=0.069 Sum_probs=66.3
Q ss_pred ccccCCCEEEEEecC-hhHHHHHHHHHhCCCEEEEECCCCCC-C---------------C--CCcccCCHHHHhhcCCEE
Q 022233 164 GSKLGGKRVGIVGLG-SIGSLVAKRLDAFGCSISYNSRTKKP-S---------------V--SYPFYSNVCELAANCDIL 224 (300)
Q Consensus 164 g~~l~g~~vgIiG~G-~IG~~~A~~l~~~g~~V~~~~~~~~~-~---------------~--~~~~~~~l~e~l~~aDvV 224 (300)
...|.|.+|++||=+ ++..+++..+..+|++|.+..+..-. . . .+....+++|+++++|||
T Consensus 183 ~~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVv 262 (353)
T 3sds_A 183 SLGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVI 262 (353)
T ss_dssp CCSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEE
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEE
Confidence 345899999999976 57788888888999999887764321 1 0 122357899999999999
Q ss_pred EEec--CCChh----------hhhcchHHHHhc--CCCCcEEEEcC
Q 022233 225 IICC--GLTAE----------THHMINKQVLSA--LGKEGVVINIG 256 (300)
Q Consensus 225 ~l~~--p~~~~----------t~~li~~~~l~~--mk~ga~lIn~s 256 (300)
..-. +...+ ...-++.+.++. +|++++|.-+.
T Consensus 263 ytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 263 VTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp EECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred EeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 8743 22211 112468899988 89999999886
No 394
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.73 E-value=0.0078 Score=55.10 Aligned_cols=85 Identities=24% Similarity=0.280 Sum_probs=59.9
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc-----cCCHHHHhh------cCCEEEEecCC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF-----YSNVCELAA------NCDILIICCGL 230 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~-----~~~l~e~l~------~aDvV~l~~p~ 230 (300)
.|++|.|+|.|.||..+++.++.+|+ +|++.+++++.. .++.. ..++.+.+. ..|+|+.++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68899999999999999999999999 999998865421 12211 123433332 58999998864
Q ss_pred ChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 231 TAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 231 ~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
.+. -...+..++++..++.++.
T Consensus 247 ~~~-----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PKA-----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHH-----HHHHHHHEEEEEEEEECCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEcc
Confidence 322 2355677788888888764
No 395
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.72 E-value=0.034 Score=50.79 Aligned_cols=97 Identities=11% Similarity=0.143 Sum_probs=62.2
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCC-------EEEEECCC----CC----------CC-CCC----cccCCHHHHhhcC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGC-------SISYNSRT----KK----------PS-VSY----PFYSNVCELAANC 221 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~-------~V~~~~~~----~~----------~~-~~~----~~~~~l~e~l~~a 221 (300)
.++|+|+|. |.+|+.++..|...|+ +|..+|+. .+ .. ... ....++.+++++|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 359999998 9999999999988775 78889887 21 00 011 1125788999999
Q ss_pred CEEEEecCCChh---hh-hcc------hHHH---HhcC-CCCcEEEEcCCCcccCHHHHH
Q 022233 222 DILIICCGLTAE---TH-HMI------NKQV---LSAL-GKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 222 DvV~l~~p~~~~---t~-~li------~~~~---l~~m-k~ga~lIn~srg~~vd~~aL~ 267 (300)
|+|+++...... ++ .++ -.++ +... ++.+++|++| .++|.-..+
T Consensus 85 D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S--NPv~~~t~~ 142 (329)
T 1b8p_A 85 DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG--NPANTNAYI 142 (329)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS--SSHHHHHHH
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc--CchHHHHHH
Confidence 999987653211 11 011 1122 2233 4788999997 455544433
No 396
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.72 E-value=0.0075 Score=55.93 Aligned_cols=84 Identities=19% Similarity=0.346 Sum_probs=59.2
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc---cCC---HHHHhhcCCEEEEecCCChhhhhc
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF---YSN---VCELAANCDILIICCGLTAETHHM 237 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~---~~~---l~e~l~~aDvV~l~~p~~~~t~~l 237 (300)
|.+|.|+|.|.||...++.++.+|++|++.+++++.. .++.. ..+ .+++....|+|+-++.....
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~---- 270 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN---- 270 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH----
Confidence 7799999999999999999999999998888765432 12211 111 22233568999998864321
Q ss_pred chHHHHhcCCCCcEEEEcCC
Q 022233 238 INKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 238 i~~~~l~~mk~ga~lIn~sr 257 (300)
-...++.++++..+|.++.
T Consensus 271 -~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 271 -LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -HHHHHTTEEEEEEEEECCC
T ss_pred -HHHHHHHhccCCEEEEecc
Confidence 2355677888888888764
No 397
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=95.71 E-value=0.026 Score=49.69 Aligned_cols=60 Identities=13% Similarity=0.131 Sum_probs=44.7
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-CCcccCCHHHHhhc--CCEEEEecCC
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-SYPFYSNVCELAAN--CDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-~~~~~~~l~e~l~~--aDvV~l~~p~ 230 (300)
|+|.|.|. |.||+.+++.|. .|++|.+.+|+..... ......++.+++++ +|+|+.+...
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 64 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAH 64 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECccc
Confidence 47899997 999999999999 7999999998753211 12223356677776 9999887653
No 398
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.70 E-value=0.0046 Score=57.00 Aligned_cols=64 Identities=9% Similarity=0.198 Sum_probs=46.3
Q ss_pred CEEEEEecChhHHHHHHHHHhC--------CCEEE-EECCCCCCCC------CC-cccCCHHHHhhc--CCEEEEecCCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF--------GCSIS-YNSRTKKPSV------SY-PFYSNVCELAAN--CDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~--------g~~V~-~~~~~~~~~~------~~-~~~~~l~e~l~~--aDvV~l~~p~~ 231 (300)
-+|||||+|.||+.-++.++.. +.+|. ++|++++... +. ..+.++++++++ .|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 4899999999999888877643 23554 6787754321 22 346789999964 79999999966
Q ss_pred hh
Q 022233 232 AE 233 (300)
Q Consensus 232 ~~ 233 (300)
-.
T Consensus 87 ~H 88 (390)
T 4h3v_A 87 SH 88 (390)
T ss_dssp GH
T ss_pred HH
Confidence 54
No 399
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=95.70 E-value=0.0095 Score=56.89 Aligned_cols=103 Identities=12% Similarity=0.207 Sum_probs=63.6
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEE-EECCCCCCCC-------C----------------------CcccCCHHHHh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSIS-YNSRTKKPSV-------S----------------------YPFYSNVCELA 218 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~~-------~----------------------~~~~~~l~e~l 218 (300)
.+|||||+|.||+.+++.+... +++|. ++|++.+... + ...+.+.++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 3899999999999999988754 66764 6777654210 1 12357899999
Q ss_pred h--cCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCC-cccCHHHHHHHHHhCCce
Q 022233 219 A--NCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRG-PIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 219 ~--~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg-~~vd~~aL~~aL~~~~i~ 276 (300)
+ +.|+|++++|... ... +-....|+.|.-++-..-+ ...+.+.|.++.++.++.
T Consensus 104 ~d~dIDaVviaTp~p~-~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 104 SNPLIDVIIDATGIPE-VGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp TCTTCCEEEECSCCHH-HHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCEEEEcCCChH-HHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe
Confidence 7 4899999998542 211 1223445555555532211 122345677766665554
No 400
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.69 E-value=0.0063 Score=55.59 Aligned_cols=85 Identities=12% Similarity=0.259 Sum_probs=59.8
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc-----cCCHHHHh----hcCCEEEEecCCChhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF-----YSNVCELA----ANCDILIICCGLTAET 234 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~-----~~~l~e~l----~~aDvV~l~~p~~~~t 234 (300)
|++|.|+|.|.||..+++.++.+|++|++.+++++.. .++.. ..++.+.+ ...|+|+.++...+.
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~- 243 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA- 243 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH-
Confidence 7799999999999999999999999999998765321 12211 12333322 468999998764222
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCC
Q 022233 235 HHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg 258 (300)
....++.|+++..+|.++..
T Consensus 244 ----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 244 ----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp ----HHHHHHHEEEEEEEEECCCC
T ss_pred ----HHHHHHHhhcCCEEEEeccc
Confidence 24566778888888887643
No 401
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.67 E-value=0.017 Score=53.61 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=55.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHhc--C
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLSA--L 246 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~~--m 246 (300)
-.++.|+|.|.+++++|+.++.+|++|+++|.++.... .+-+..+|-++..-| .+.+.. +
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~--------~~~fp~a~~v~~~~p----------~~~~~~~~~ 260 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCE--------KHFFPDADEIIVDFP----------ADFLRKFLI 260 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGC--------GGGCTTCSEEEESCH----------HHHHHHSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccc--------cccCCCceEEecCCH----------HHHHhhcCC
Confidence 44899999999999999999999999999887654211 111234454443322 111222 4
Q ss_pred CCCcEEEEcCCCcccCHHHHHHHHHh
Q 022233 247 GKEGVVINIGRGPIIDEQELVRCLVQ 272 (300)
Q Consensus 247 k~ga~lIn~srg~~vd~~aL~~aL~~ 272 (300)
.+++.+|=+.++.-.|...|..+|+.
T Consensus 261 ~~~t~vvv~TH~h~~D~~~L~~aL~~ 286 (362)
T 3on5_A 261 RPDDFVLIMTHHFQKDQEILHFLLEK 286 (362)
T ss_dssp CTTCEEEECCSCHHHHHHHHHHHSSS
T ss_pred CCCeEEEEEeCCchhhHHHHHHHhcC
Confidence 45566666666666666666666654
No 402
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.66 E-value=0.11 Score=46.83 Aligned_cols=64 Identities=20% Similarity=0.141 Sum_probs=51.5
Q ss_pred cCCCEEEEEec---ChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcccCCHHHHhhcCCEEEEecCCC
Q 022233 167 LGGKRVGIVGL---GSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPFYSNVCELAANCDILIICCGLT 231 (300)
Q Consensus 167 l~g~~vgIiG~---G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~~~~l~e~l~~aDvV~l~~p~~ 231 (300)
+.|.+|+++|= +++.++.+..+..+|++|.+..+..-... +.....+++|+++++|+|.. +-..
T Consensus 144 l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~q 215 (291)
T 3d6n_B 144 VKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRLQ 215 (291)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCCC
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCcc
Confidence 67999999997 89999999999999999988776432111 23446789999999999999 6654
No 403
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.65 E-value=0.06 Score=47.23 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=47.8
Q ss_pred CEEEEEec-ChhHHHHHHHHHhC-CCEEE-EECCCCCCCCCCcccCCHHHHhh-cCCEEEEecCCChhhhhcchHHHHhc
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAF-GCSIS-YNSRTKKPSVSYPFYSNVCELAA-NCDILIICCGLTAETHHMINKQVLSA 245 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~-g~~V~-~~~~~~~~~~~~~~~~~l~e~l~-~aDvV~l~~p~~~~t~~li~~~~l~~ 245 (300)
++|+|+|+ |+||+.+++.+... |+++. ++++. .++++++. .+|+|+-+.+... +.. .....
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~----------~dl~~~~~~~~DvvIDfT~p~a-~~~----~~~~a 65 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG----------DPLSLLTDGNTEVVIDFTHPDV-VMG----NLEFL 65 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT----------CCTHHHHHTTCCEEEECSCTTT-HHH----HHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC----------CCHHHHhccCCcEEEEccChHH-HHH----HHHHH
Confidence 47999996 99999999998865 88876 55553 35667665 7999985553222 221 12222
Q ss_pred CCCCcEEEEcCCC
Q 022233 246 LGKEGVVINIGRG 258 (300)
Q Consensus 246 mk~ga~lIn~srg 258 (300)
++.|.-+|-...|
T Consensus 66 ~~~g~~~VigTTG 78 (245)
T 1p9l_A 66 IDNGIHAVVGTTG 78 (245)
T ss_dssp HHTTCEEEECCCC
T ss_pred HHcCCCEEEcCCC
Confidence 4455555555556
No 404
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=95.64 E-value=0.017 Score=50.28 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=59.4
Q ss_pred CCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCC------CcccCCHHHHhhc-------CCEEEEecCC---
Q 022233 168 GGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVS------YPFYSNVCELAAN-------CDILIICCGL--- 230 (300)
Q Consensus 168 ~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~------~~~~~~l~e~l~~-------aDvV~l~~p~--- 230 (300)
.||++.|.|. |.||+.+|+.|...|++|++.+|+...... .....++++++++ -|+|+.+.-.
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~ 100 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSG 100 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC
Confidence 4789999996 679999999999999999999887654321 1111234444443 4988887642
Q ss_pred ----Chhh----hhc----------chHHHHhcCCCCcEEEEcCCCc
Q 022233 231 ----TAET----HHM----------INKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 231 ----~~~t----~~l----------i~~~~l~~mk~ga~lIn~srg~ 259 (300)
...+ +.+ +.+..+..|+++..||++|...
T Consensus 101 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 101 GNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 1111 111 1234556677778899988654
No 405
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.63 E-value=0.034 Score=50.51 Aligned_cols=96 Identities=19% Similarity=0.174 Sum_probs=68.3
Q ss_pred cCCCEEEEEec---ChhHHHHHHHHHhC-CCEEEEECCCCCCCC----------CC--cccCCHHHHhhcCCEEEEecCC
Q 022233 167 LGGKRVGIVGL---GSIGSLVAKRLDAF-GCSISYNSRTKKPSV----------SY--PFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 167 l~g~~vgIiG~---G~IG~~~A~~l~~~-g~~V~~~~~~~~~~~----------~~--~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
+.|.+|+++|= |++.++++..+..+ |++|.+..+..-... +. ....+++|+++++|+|..-.=-
T Consensus 152 l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (310)
T 3csu_A 152 LDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQ 231 (310)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC--
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 67999999998 59999999999999 999988776432111 22 2347899999999999886431
Q ss_pred Ch----hh------hhcchHHHHhcCCCCcEEEEcC-CCcccC
Q 022233 231 TA----ET------HHMINKQVLSALGKEGVVINIG-RGPIID 262 (300)
Q Consensus 231 ~~----~t------~~li~~~~l~~mk~ga~lIn~s-rg~~vd 262 (300)
.+ +. .--++.+.++.+|++++|.-+. ||.=|+
T Consensus 232 ~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~EI~ 274 (310)
T 3csu_A 232 KERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIA 274 (310)
T ss_dssp ---------------CCBCGGGGTTCCTTCEEECCSCCSSSBC
T ss_pred ccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCCCCCeec
Confidence 11 11 1345778888889999998886 544444
No 406
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.62 E-value=0.02 Score=51.02 Aligned_cols=61 Identities=13% Similarity=0.262 Sum_probs=46.8
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCC---------CCcccCCHHHHhhcCCEEEEecCC
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSV---------SYPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~---------~~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
+++|.|.| .|.||+.+++.|...|++|.+.+|+..... ... ..++.++++++|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 47999999 699999999999999999999988733211 122 34567788899999887654
No 407
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.62 E-value=0.054 Score=47.99 Aligned_cols=62 Identities=19% Similarity=0.150 Sum_probs=44.9
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCC-------------CCCC-------cccCCHHHHhhcCCEEEEe
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKP-------------SVSY-------PFYSNVCELAANCDILIIC 227 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~-------------~~~~-------~~~~~l~e~l~~aDvV~l~ 227 (300)
.++|.|.|. |.||+.+++.|...|++|.+.+|+... ..+. ....++.++++++|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 468999995 999999999999999999999887421 0111 1123456677788888777
Q ss_pred cCC
Q 022233 228 CGL 230 (300)
Q Consensus 228 ~p~ 230 (300)
...
T Consensus 84 a~~ 86 (313)
T 1qyd_A 84 LAG 86 (313)
T ss_dssp CCC
T ss_pred Ccc
Confidence 654
No 408
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.62 E-value=0.016 Score=49.80 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=58.7
Q ss_pred CCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCC--------CcccCCHHHHhh---------cCCEEEEecC
Q 022233 168 GGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVS--------YPFYSNVCELAA---------NCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~--------~~~~~~l~e~l~---------~aDvV~l~~p 229 (300)
.||++.|.|. |.||+.+|+.|...|++|+..+|+...... .....+++++++ ..|+|+.+.-
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 81 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG 81 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCc
Confidence 4788999985 789999999999999999998887654221 111122333333 6798888764
Q ss_pred CC-------hhh----hhcc----------hHHHHhcCCCCcEEEEcCCCc
Q 022233 230 LT-------AET----HHMI----------NKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 230 ~~-------~~t----~~li----------~~~~l~~mk~ga~lIn~srg~ 259 (300)
.. +.+ +.++ .+..++.|+++..+||+|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 132 (236)
T 1ooe_A 82 GWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA 132 (236)
T ss_dssp CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred ccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 21 111 1111 234556676677899988653
No 409
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.61 E-value=0.016 Score=53.65 Aligned_cols=36 Identities=33% Similarity=0.410 Sum_probs=32.4
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCC
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRT 201 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~ 201 (300)
.|.+++|.|||+|.+|..+|+.|...|. ++.++|..
T Consensus 115 ~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 115 KLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 5889999999999999999999999998 78877764
No 410
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.60 E-value=0.0096 Score=54.81 Aligned_cols=84 Identities=27% Similarity=0.443 Sum_probs=58.6
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCccc-----C-CHHHHh-hcCCEEEEecCCC--hhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPFY-----S-NVCELA-ANCDILIICCGLT--AET 234 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~~-----~-~l~e~l-~~aDvV~l~~p~~--~~t 234 (300)
|.+|.|+|.|.||...++.++.+|++|++.+++++... ++... . ++.+.+ ...|+|+-++..+ ..
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~- 258 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID- 258 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH-
Confidence 77999999999999999999999999999887665421 22211 1 333322 4689999998752 22
Q ss_pred hhcchHHHHhcCCCCcEEEEcCC
Q 022233 235 HHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~sr 257 (300)
+ ...++.++++..++.++.
T Consensus 259 ---~-~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 259 ---F-NIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ---T-TTGGGGEEEEEEEEECCC
T ss_pred ---H-HHHHHHhcCCCEEEEecC
Confidence 1 244567788888877753
No 411
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.60 E-value=0.0037 Score=58.37 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=64.1
Q ss_pred CCEEEEEecChhHHHHHHHHHhC--CCEEE-EECCCCCCC------CCCcccCCHHHHhhcCCEEEEecCCChh--hhhc
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAF--GCSIS-YNSRTKKPS------VSYPFYSNVCELAANCDILIICCGLTAE--THHM 237 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~--g~~V~-~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p~~~~--t~~l 237 (300)
..+|||||.| +|+.-++.++.. ++++. +++++.+.. .++..+.++++++.+.|++++++|..-. ...-
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~~ 85 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVAGGAGTQ 85 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CTTSHHHH
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcccchhHHH
Confidence 4589999999 799888877765 57765 678876532 2555678999999999999999986432 1001
Q ss_pred chHHHHhcCCCCc-EEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 238 INKQVLSALGKEG-VVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 238 i~~~~l~~mk~ga-~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
+....++ .|. +++.-= -.+-+.++|+++.++.++.
T Consensus 86 ~a~~al~---aGkhVl~EKP-l~~~ea~~l~~~A~~~g~~ 121 (372)
T 4gmf_A 86 LARHFLA---RGVHVIQEHP-LHPDDISSLQTLAQEQGCC 121 (372)
T ss_dssp HHHHHHH---TTCEEEEESC-CCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHH---cCCcEEEecC-CCHHHHHHHHHHHHHcCCE
Confidence 2222222 232 222211 1234666777777766665
No 412
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.59 E-value=0.039 Score=51.04 Aligned_cols=85 Identities=24% Similarity=0.283 Sum_probs=60.6
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc-------cCCHHHHhh-----cCCEEEEecC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF-------YSNVCELAA-----NCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~-------~~~l~e~l~-----~aDvV~l~~p 229 (300)
.|.+|.|+|.|.||...++.++.+|. +|++.+++++.. .++.. ..++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 37899999999999999999999999 899998776531 23221 123444333 4899999886
Q ss_pred CChhhhhcchHHHHhcCCCC-cEEEEcCC
Q 022233 230 LTAETHHMINKQVLSALGKE-GVVINIGR 257 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~g-a~lIn~sr 257 (300)
..+. -...+..+++| ..++.++-
T Consensus 273 ~~~~-----~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 NVSV-----MRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhccCCEEEEEcc
Confidence 4222 24567788986 88888763
No 413
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.59 E-value=0.03 Score=49.90 Aligned_cols=95 Identities=24% Similarity=0.250 Sum_probs=62.2
Q ss_pred cccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC----------CC---------CcccCCHHHHhh-----
Q 022233 165 SKLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS----------VS---------YPFYSNVCELAA----- 219 (300)
Q Consensus 165 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------~~---------~~~~~~l~e~l~----- 219 (300)
.++.||++.|.|. |.||+++|+.|...|++|.+.+++.... .+ .....+++++++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4589999999997 6899999999999999998887765310 01 011122333443
Q ss_pred --cCCEEEEecCCC----------hh-hhh----------cchHHHHhcCCCCcEEEEcCCCc
Q 022233 220 --NCDILIICCGLT----------AE-THH----------MINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 220 --~aDvV~l~~p~~----------~~-t~~----------li~~~~l~~mk~ga~lIn~srg~ 259 (300)
.-|+++.+.-.. .+ -+. .+.+..+..|+++..|||++...
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~ 185 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV 185 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence 679998874321 10 011 12345567788888999998653
No 414
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.58 E-value=0.006 Score=55.63 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=55.8
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCc-------ccCCHHHH-hhcCCEEEEecCCChhhhh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYP-------FYSNVCEL-AANCDILIICCGLTAETHH 236 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~-------~~~~l~e~-l~~aDvV~l~~p~~~~t~~ 236 (300)
.+++.|+|+|.+|+.+++.|...|. |.+.+++++.. .+.. ....++++ +++||.|+++++..+.+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n-- 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET-- 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHH--
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHH--
Confidence 5689999999999999999999999 99998876422 1111 11234444 78899999998755333
Q ss_pred cchHHHHhcCCCCcEEE
Q 022233 237 MINKQVLSALGKEGVVI 253 (300)
Q Consensus 237 li~~~~l~~mk~ga~lI 253 (300)
+.-....+.+.+...+|
T Consensus 192 ~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 192 IHCILGIRKIDESVRII 208 (336)
T ss_dssp HHHHHHHHTTCTTSEEE
T ss_pred HHHHHHHHHHCCCCeEE
Confidence 34445556666663333
No 415
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.57 E-value=0.075 Score=50.27 Aligned_cols=105 Identities=16% Similarity=0.239 Sum_probs=70.6
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEE-EECCCC-----CCCC-----------C-Cc-ccCCHHHHh-hcCCE
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSIS-YNSRTK-----KPSV-----------S-YP-FYSNVCELA-ANCDI 223 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~-~~~~~~-----~~~~-----------~-~~-~~~~l~e~l-~~aDv 223 (300)
|.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+. +... + .. +..+-++++ ..||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 446889999999999999999999999999987 555521 0000 0 00 011123333 47999
Q ss_pred EEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 224 LIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 224 V~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
++-|.. .+.|+.+-...++- .+++.-+-+++- .+ -.+.|++++|.
T Consensus 293 liP~A~-----~n~i~~~~A~~l~a-k~V~EgAN~p~t-~~-A~~~L~~~Gi~ 337 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQA-QAVVEVANFGLN-PE-AEAYLLGKGAL 337 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCCC-SEEEECSTTCBC-HH-HHHHHHHHTCE
T ss_pred EEeccc-----ccccccchHhhCCc-eEEEECCCCcCC-HH-HHHHHHHCCCE
Confidence 988853 45577777777753 588999988864 43 34667766664
No 416
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.57 E-value=0.018 Score=53.02 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=53.3
Q ss_pred CEEEEEe-cChhHHHHHHHHHhC-CCEEEEE-CCCC--CCCC----------CC-c-ccC---CHHHHhhcCCEEEEecC
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAF-GCSISYN-SRTK--KPSV----------SY-P-FYS---NVCELAANCDILIICCG 229 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~-g~~V~~~-~~~~--~~~~----------~~-~-~~~---~l~e~l~~aDvV~l~~p 229 (300)
.+|+|+| .|.+|+.+.+.|... .+++... +++. .... +. . ... +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 4899999 699999999999974 4576544 3331 1100 10 0 111 34455589999999998
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCCc
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg~ 259 (300)
.....+ + -.. .++.|+.+||.|.--
T Consensus 85 ~~~s~~-~-~~~---~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 85 HEVSHD-L-APQ---FLEAGCVVFDLSGAF 109 (337)
T ss_dssp HHHHHH-H-HHH---HHHTTCEEEECSSTT
T ss_pred hHHHHH-H-HHH---HHHCCCEEEEcCCcc
Confidence 433222 1 122 246799999998553
No 417
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=95.57 E-value=0.14 Score=47.29 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=69.6
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC--------------C--CcccCCHHHHhhcCCEEEEec
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV--------------S--YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------------~--~~~~~~l~e~l~~aDvV~l~~ 228 (300)
.+.|.+|++||= +++..+++..+..+|++|.+..+..-... + .....+++ +++++|||..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 477999999996 68888999999999999988776432111 1 22356888 999999998732
Q ss_pred ----CC---C-hh----h--hhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 229 ----GL---T-AE----T--HHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 229 ----p~---~-~~----t--~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
.. . .+ . .--++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 281 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 281 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 10 0 11 0 1346888999999999999886 66555543
No 418
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=95.55 E-value=0.054 Score=47.44 Aligned_cols=64 Identities=22% Similarity=0.202 Sum_probs=45.9
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCCC-------cccCCHHHHhh-------cCCEEEEecC
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVSY-------PFYSNVCELAA-------NCDILIICCG 229 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~-------~~~~~l~e~l~-------~aDvV~l~~p 229 (300)
++.||++.|.|. |.||+.+|+.|...|++|+..+|+....... ....+++++++ ..|+|+.+.-
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag 83 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAG 83 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 478999999985 7899999999999999999888865432111 11123344444 6899998764
No 419
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.55 E-value=0.0091 Score=57.04 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=64.4
Q ss_pred CCEEEEEecChhHHHHHHHHHh----------CCCEEE-EECCCCCCC----CCCcccCCHHHHhh--cCCEEEEecCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDA----------FGCSIS-YNSRTKKPS----VSYPFYSNVCELAA--NCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~----------~g~~V~-~~~~~~~~~----~~~~~~~~l~e~l~--~aDvV~l~~p~~ 231 (300)
-.+|||||+|.||+.+++.+.. .+.+|. +++++.... .+...+.+++++++ +.|+|+.++|..
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 3489999999999999987753 355664 567654321 12345678999987 479999999853
Q ss_pred -hhhhhcchHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHhCCce
Q 022233 232 -AETHHMINKQVLSALGKEGVVINIGRGPII-DEQELVRCLVQGEIK 276 (300)
Q Consensus 232 -~~t~~li~~~~l~~mk~ga~lIn~srg~~v-d~~aL~~aL~~~~i~ 276 (300)
..-. + ....++.|.-++-.--+... +.++|.++.++.++.
T Consensus 90 ~~h~~-~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 90 EPARE-L----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp TTHHH-H----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHH-H----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 3322 1 23445556555543222222 336777777766554
No 420
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.52 E-value=0.035 Score=50.75 Aligned_cols=85 Identities=18% Similarity=0.266 Sum_probs=59.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc---c---CC-HHH---Hh-----hcCCEEEEec
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF---Y---SN-VCE---LA-----ANCDILIICC 228 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~---~---~~-l~e---~l-----~~aDvV~l~~ 228 (300)
|.+|.|+|.|.+|...++.++.+|.+|++.+++++.. .++.. . .+ .++ .. ...|+|+-++
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~ 248 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCS 248 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECC
Confidence 7799999999999999999999999998887764321 12211 1 12 222 22 2589999988
Q ss_pred CCChhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 229 GLTAETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 229 p~~~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
..... -...+..++++..+|.++.+
T Consensus 249 g~~~~-----~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 249 GNEKC-----ITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp CCHHH-----HHHHHHHSCTTCEEEECSCC
T ss_pred CCHHH-----HHHHHHHHhcCCEEEEEecC
Confidence 64322 24567788999999998743
No 421
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.51 E-value=0.023 Score=52.71 Aligned_cols=84 Identities=13% Similarity=0.066 Sum_probs=49.6
Q ss_pred CEEEEEecChhHHHHHHHHHhC--C--CEEE-EECCCCCC--CC--CCcccCCHHHHhhcC-------------------
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF--G--CSIS-YNSRTKKP--SV--SYPFYSNVCELAANC------------------- 221 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~--g--~~V~-~~~~~~~~--~~--~~~~~~~l~e~l~~a------------------- 221 (300)
.+|||||+|.||+.+++.+... | ++|. +.++.... .. +...+.++++++++.
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~~~ 84 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPK 84 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSS
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhccC
Confidence 3899999999999999999875 3 4654 45543221 11 222234566666543
Q ss_pred -CEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 222 -DILIICCGLTAETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 222 -DvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
|+|+.|+|....... ....|+.|--+|-..-.
T Consensus 85 ~DvVV~~t~~~~~a~~-----~~~AL~aGkhVVtaNkk 117 (358)
T 1ebf_A 85 PVILVDNTSSAYIAGF-----YTKFVENGISIATPNKK 117 (358)
T ss_dssp CEEEEECSCCHHHHTT-----HHHHHHTTCEEECCCCG
T ss_pred CcEEEEcCCChHHHHH-----HHHHHHCCCeEEecCcc
Confidence 789999886432221 12344555555543333
No 422
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=95.49 E-value=0.012 Score=50.18 Aligned_cols=91 Identities=18% Similarity=0.138 Sum_probs=60.3
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhh---cCCEEEEecCCC-h--------
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAA---NCDILIICCGLT-A-------- 232 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~---~aDvV~l~~p~~-~-------- 232 (300)
.+.||++.|.|. |-||+++|+.|...|++|.+.+|+.. .......+++++++ .-|+++.+.-.. +
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~ 80 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVE 80 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCC
Confidence 367899999997 68999999999999999999988754 12222233444443 579888765432 0
Q ss_pred -h-hhh----------cchHHHHhcCCCCcEEEEcCCC
Q 022233 233 -E-THH----------MINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 233 -~-t~~----------li~~~~l~~mk~ga~lIn~srg 258 (300)
+ -+. .+.+..++.|+++..+||+|..
T Consensus 81 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 81 VTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred HHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 0 000 1123456678878889999864
No 423
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=95.49 E-value=0.025 Score=48.70 Aligned_cols=93 Identities=17% Similarity=0.182 Sum_probs=59.3
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCC--------CcccCCHHHHhh---------cCCEEEEec
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVS--------YPFYSNVCELAA---------NCDILIICC 228 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~--------~~~~~~l~e~l~---------~aDvV~l~~ 228 (300)
..+|++.|.|. |.||+.+|+.|...|++|+..+|+...... .....+++++++ ..|+|+.+.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~A 84 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA 84 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcc
Confidence 56889999985 689999999999999999998887644221 111123333433 679888875
Q ss_pred CCC-------hhh----hhc----------chHHHHhcCCCCcEEEEcCCCc
Q 022233 229 GLT-------AET----HHM----------INKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 229 p~~-------~~t----~~l----------i~~~~l~~mk~ga~lIn~srg~ 259 (300)
-.. +.+ +.. +.+..++.|+++..+||+|...
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~ 136 (241)
T 1dhr_A 85 GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA 136 (241)
T ss_dssp CCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred cccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHH
Confidence 421 111 111 1234456676677899998654
No 424
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=95.48 E-value=0.051 Score=48.34 Aligned_cols=61 Identities=20% Similarity=0.209 Sum_probs=46.7
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCCCCcccCCHHHHhh--cCCEEEEecCCC
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSVSYPFYSNVCELAA--NCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~~~~~~l~e~l~--~aDvV~l~~p~~ 231 (300)
+++|.|.| .|.||+.+++.|...|++|++.+++.. .......++.++++ .+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~--~D~~d~~~~~~~~~~~~~d~vih~a~~~ 66 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--LNLLDSRAVHDFFASERIDQVYLAAAKV 66 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc--CCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence 57999999 599999999999999999988876532 12222345677788 899998876543
No 425
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.44 E-value=0.032 Score=52.18 Aligned_cols=90 Identities=19% Similarity=0.254 Sum_probs=59.0
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc-----cCCHHHHh------hcCCEEEEecCC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF-----YSNVCELA------ANCDILIICCGL 230 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~-----~~~l~e~l------~~aDvV~l~~p~ 230 (300)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++++.. .++.. ..++.+.+ ...|+|+-++..
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 47899999999999999999999999 899988765431 12211 12333322 258999999875
Q ss_pred ChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 231 TAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 231 ~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
...+...+...+...++++..++.++-
T Consensus 293 ~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 293 PQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred cHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 422221111111233389999998863
No 426
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.44 E-value=0.018 Score=53.44 Aligned_cols=83 Identities=17% Similarity=0.213 Sum_probs=52.3
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEEEECC-CCCC-----------C---C-CC---------------ccc--CCHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSISYNSR-TKKP-----------S---V-SY---------------PFY--SNVC 215 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~~~~~-~~~~-----------~---~-~~---------------~~~--~~l~ 215 (300)
.+|||+|+|.||+.+.|.|... .++|.+.+. .... . . +. ... .+++
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 97 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPA 97 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChH
Confidence 3899999999999999999876 578765432 2111 0 0 00 011 1444
Q ss_pred HH-h--hcCCEEEEecCCChhhhhcchHHHHhcCCCCc--EEEEcCC
Q 022233 216 EL-A--ANCDILIICCGLTAETHHMINKQVLSALGKEG--VVINIGR 257 (300)
Q Consensus 216 e~-l--~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga--~lIn~sr 257 (300)
++ + .++|+|+.++|..... +..-..++.|+ ++|+.+.
T Consensus 98 ~i~w~~~~vDvV~eatg~~~s~-----e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 98 EIPWGASGAQIVCESTGVFTTE-----EKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GCCHHHHTCCEEEECSSSCCSH-----HHHGGGGTTTCSEEEESSCC
T ss_pred HCCcccCCCCEEEECCCchhhH-----HHHHHHHHcCCcEEEEeCCC
Confidence 43 2 5799999999854321 22234467788 9998864
No 427
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=95.44 E-value=0.013 Score=51.32 Aligned_cols=62 Identities=19% Similarity=0.305 Sum_probs=47.6
Q ss_pred CCCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCCC---------CcccCCHHHHhhcCCEEEEecC
Q 022233 168 GGKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSVS---------YPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 168 ~g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~---------~~~~~~l~e~l~~aDvV~l~~p 229 (300)
.+|+|.|.| .|.||+.+++.|...|++|.+.+|+...... .....++.+++++.|+|+.+.-
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence 367899999 6999999999999999999999887654321 1122356678899999988754
No 428
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.44 E-value=0.019 Score=50.79 Aligned_cols=61 Identities=18% Similarity=0.077 Sum_probs=47.1
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCC-CEEEEECCCCCCC-------CCC-------cccCCHHHHhhcCCEEEEecC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFG-CSISYNSRTKKPS-------VSY-------PFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g-~~V~~~~~~~~~~-------~~~-------~~~~~l~e~l~~aDvV~l~~p 229 (300)
.++|.|.|. |.||+.+++.|...| ++|.+.+|++... .+. ....++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 579999998 999999999999888 9999888875431 111 112356678899999998765
No 429
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=95.42 E-value=0.029 Score=49.96 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=44.7
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCC--------CCcccCCHHHHhhc--CCEEEEecCCC
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSV--------SYPFYSNVCELAAN--CDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------~~~~~~~l~e~l~~--aDvV~l~~p~~ 231 (300)
-++|.|.| .|.||+.+++.|...|++|.+.+|+..... ......++.++++. .|+|+.+....
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 85 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS 85 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence 56888887 499999999999999999999888754311 11112345566765 89998876543
No 430
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.42 E-value=0.007 Score=53.04 Aligned_cols=60 Identities=15% Similarity=0.162 Sum_probs=43.4
Q ss_pred EEEEEec-ChhHHHHHHHHHhC--CCEEEEECCCCCCCC-----CC-------cccCCHHHHhhcCCEEEEecCC
Q 022233 171 RVGIVGL-GSIGSLVAKRLDAF--GCSISYNSRTKKPSV-----SY-------PFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 171 ~vgIiG~-G~IG~~~A~~l~~~--g~~V~~~~~~~~~~~-----~~-------~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
+|.|.|. |.||+.+++.|... |++|.+.+|++.... +. ....++.++++++|+|+.+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4778886 99999999999988 999998888654321 11 1123466788899999877653
No 431
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.41 E-value=0.029 Score=51.59 Aligned_cols=66 Identities=21% Similarity=0.213 Sum_probs=49.5
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCC-CEEEEECCCCCCC-------CCC-------cccCCHHHHhhcCCEEEEecC
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFG-CSISYNSRTKKPS-------VSY-------PFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g-~~V~~~~~~~~~~-------~~~-------~~~~~l~e~l~~aDvV~l~~p 229 (300)
.+.+++|.|.|. |.||+.+++.|...| ++|.+.+|+.... ... ....++.++++.+|+|+.+..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 478999999995 999999999999999 9999998865431 111 111235567788999988766
Q ss_pred CC
Q 022233 230 LT 231 (300)
Q Consensus 230 ~~ 231 (300)
..
T Consensus 109 ~~ 110 (377)
T 2q1s_A 109 YH 110 (377)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 432
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.40 E-value=0.014 Score=53.66 Aligned_cols=84 Identities=17% Similarity=0.079 Sum_probs=50.8
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCC---CEEEEEC-CCCCCC-C---CCc-ccCCH-HHHhhcCCEEEEecCCChhhhhcc
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFG---CSISYNS-RTKKPS-V---SYP-FYSNV-CELAANCDILIICCGLTAETHHMI 238 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g---~~V~~~~-~~~~~~-~---~~~-~~~~l-~e~l~~aDvV~l~~p~~~~t~~li 238 (300)
.+|+|+| .|.||+.+.+.|...+ +++.... ++.... . +.. ...++ .+.+.++|+|+.|+|.....+ .
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~s~~-~- 81 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSAK-W- 81 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHHHHH-H-
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchHHHH-H-
Confidence 5899999 9999999999998763 4665443 322111 0 100 11111 124578999999998543222 1
Q ss_pred hHHHHhcCCCCcEEEEcCCC
Q 022233 239 NKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 239 ~~~~l~~mk~ga~lIn~srg 258 (300)
-.. .++.|+.+|+.|.-
T Consensus 82 a~~---~~~~G~~vId~s~~ 98 (336)
T 2r00_A 82 API---AAEAGVVVIDNTSH 98 (336)
T ss_dssp HHH---HHHTTCEEEECSST
T ss_pred HHH---HHHcCCEEEEcCCc
Confidence 122 23568899998743
No 433
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.39 E-value=0.016 Score=52.39 Aligned_cols=96 Identities=17% Similarity=0.181 Sum_probs=59.8
Q ss_pred CEEEEEecChhHHHHHHHHHhCCC--EEEEECCCCCCCC-------------CC--c-ccCCHHHHhhcCCEEEEecC--
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGC--SISYNSRTKKPSV-------------SY--P-FYSNVCELAANCDILIICCG-- 229 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~-------------~~--~-~~~~l~e~l~~aDvV~l~~p-- 229 (300)
+||+|||.|.||+++|-.|+..+. ++..+|....... +. . ...+-.+.+++||+|+++.-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 589999999999999999887664 7899998653211 10 0 11222357899999999763
Q ss_pred CCh-hhh-hcc--hHH-------HHhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 230 LTA-ETH-HMI--NKQ-------VLSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 230 ~~~-~t~-~li--~~~-------~l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
-.| .++ .++ |.. .+..-.|.++++.++ .++|.-..+
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs--NPvd~~t~i 127 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYI 127 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec--CcchhhHHh
Confidence 222 122 122 222 123345788888874 446655544
No 434
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.37 E-value=0.039 Score=53.12 Aligned_cols=97 Identities=18% Similarity=0.179 Sum_probs=68.9
Q ss_pred cCCCEEEEEec----------ChhHHHHHHHHHhCCCEEEEECCCCCCCC---------C-------CcccCCHHHHhhc
Q 022233 167 LGGKRVGIVGL----------GSIGSLVAKRLDAFGCSISYNSRTKKPSV---------S-------YPFYSNVCELAAN 220 (300)
Q Consensus 167 l~g~~vgIiG~----------G~IG~~~A~~l~~~g~~V~~~~~~~~~~~---------~-------~~~~~~l~e~l~~ 220 (300)
+.|++|+|+|+ ..-...+++.|...|.+|.+||+...... + .....++.+.+++
T Consensus 333 ~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (481)
T 2o3j_A 333 VTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAARG 412 (481)
T ss_dssp CTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHTT
T ss_pred cCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHcC
Confidence 68999999997 45678999999999999999999743110 0 1223577889999
Q ss_pred CCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHH
Q 022233 221 CDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQEL 266 (300)
Q Consensus 221 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL 266 (300)
+|+|++++.-. +-+.+=-..+.+.|+...+++|+ |+- .|.+.+
T Consensus 413 ad~~vi~t~~~-~f~~~~~~~~~~~~~~~~~i~D~-r~~-~~~~~~ 455 (481)
T 2o3j_A 413 AHAIVVLTEWD-EFVELNYSQIHNDMQHPAAIFDG-RLI-LDQKAL 455 (481)
T ss_dssp CSEEEECSCCG-GGTTSCHHHHHHHSCSSCEEEES-SSC-SCHHHH
T ss_pred CCEEEEcCCcH-HhhccCHHHHHHhcCCCCEEEEC-CCC-CCHHHH
Confidence 99999998754 33332223455678877789987 654 565543
No 435
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=95.37 E-value=0.014 Score=51.25 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=33.3
Q ss_pred ccCCCEEEEEe---cChhHHHHHHHHHhCCCEEEEECCCC
Q 022233 166 KLGGKRVGIVG---LGSIGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 166 ~l~g~~vgIiG---~G~IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
.+.||++.|.| .|.||+++|+.|...|++|+..+|+.
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 47899999999 59999999999999999999888765
No 436
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.35 E-value=0.012 Score=52.69 Aligned_cols=82 Identities=15% Similarity=0.194 Sum_probs=58.3
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCccc------CCHHHHhhcCCEEEEecCCChhhhh
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPFY------SNVCELAANCDILIICCGLTAETHH 236 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~~------~~l~e~l~~aDvV~l~~p~~~~t~~ 236 (300)
|++|.|+|. |.+|..+++.++.+|++|++.+++++.. .+.... .++.+.+...|+|+. +.. +
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~---- 199 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K---- 199 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T----
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H----
Confidence 779999998 9999999999999999999988765432 122211 122233467899998 754 2
Q ss_pred cchHHHHhcCCCCcEEEEcCC
Q 022233 237 MINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 237 li~~~~l~~mk~ga~lIn~sr 257 (300)
.....+..|+++..++.++.
T Consensus 200 -~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 200 -EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp -THHHHHTTEEEEEEEEEC--
T ss_pred -HHHHHHHhhccCCEEEEEeC
Confidence 23567788899989888863
No 437
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.35 E-value=0.023 Score=52.32 Aligned_cols=29 Identities=31% Similarity=0.432 Sum_probs=24.1
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEEEE
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSISYN 198 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~~~ 198 (300)
.+|||+|+|+||+.+++.|... +++|.+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI 33 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAV 33 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEE
Confidence 3899999999999999998865 5676543
No 438
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=95.35 E-value=0.035 Score=50.12 Aligned_cols=94 Identities=16% Similarity=0.307 Sum_probs=57.7
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCCC--EEEEECC--CCCCCCC--------------CcccCCHHHHhhcCCEEEEecCC
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFGC--SISYNSR--TKKPSVS--------------YPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g~--~V~~~~~--~~~~~~~--------------~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
++|+|+| .|.+|++++..|...|. ++..+|+ ......+ .....+..+.+++||+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4899999 99999999999987775 6888887 4321100 00001225679999999998764
Q ss_pred Chh---hh-hc------chHHH---HhcCCCCcEEEEcCCCcccCHHH
Q 022233 231 TAE---TH-HM------INKQV---LSALGKEGVVINIGRGPIIDEQE 265 (300)
Q Consensus 231 ~~~---t~-~l------i~~~~---l~~mk~ga~lIn~srg~~vd~~a 265 (300)
... ++ .+ +-+++ .....+.+++++. ..++|.-.
T Consensus 81 ~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~--SNPv~~~~ 126 (303)
T 1o6z_A 81 PRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT--SNPVDLLN 126 (303)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC--CSSHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEe--CChHHHHH
Confidence 321 11 01 11222 2334678899986 44555533
No 439
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.33 E-value=0.017 Score=53.06 Aligned_cols=85 Identities=29% Similarity=0.360 Sum_probs=60.4
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC------CCCCcc---cCC---HHHHhhcCCEEEEecCCChhhh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP------SVSYPF---YSN---VCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~------~~~~~~---~~~---l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
.|.+|.|+|.|.||...++.++.+|.+|++.+++++. ..++.. ..+ +.++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 4789999999999999999999999999988876542 223221 122 22333468999998864322
Q ss_pred hcchHHHHhcCCCCcEEEEcCC
Q 022233 236 HMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 236 ~li~~~~l~~mk~ga~lIn~sr 257 (300)
-...+..++++..++.++.
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2356678889999988864
No 440
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.33 E-value=0.0076 Score=52.91 Aligned_cols=61 Identities=18% Similarity=0.191 Sum_probs=45.3
Q ss_pred CEEEEEec-ChhHHHHHHHHHhC--CCEEEEECCCCCCCC-----CC-------cccCCHHHHhhcCCEEEEecCC
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAF--GCSISYNSRTKKPSV-----SY-------PFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~--g~~V~~~~~~~~~~~-----~~-------~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
|+|.|.|. |.||+.+++.|... |++|.+.+|+..... +. ....++.++++++|+|+.+...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 46888886 99999999999988 999999888654321 11 1123466788899999877653
No 441
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.32 E-value=0.029 Score=48.08 Aligned_cols=61 Identities=20% Similarity=0.257 Sum_probs=43.8
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCC-C----cccCCHHHHhh----cCCEEEEecCC
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVS-Y----PFYSNVCELAA----NCDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~-~----~~~~~l~e~l~----~aDvV~l~~p~ 230 (300)
|++.|.|. |.||+.+++.|...|++|++.+|+...... . ....+++++++ ..|+|+.+.-.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence 47889987 999999999999999999998887543211 1 11123445555 78999887643
No 442
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=95.32 E-value=0.21 Score=45.58 Aligned_cols=96 Identities=5% Similarity=-0.025 Sum_probs=70.9
Q ss_pred cCCCEEEE-----EecChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcccCCHHHHhhcCCEEEEecCCC--h--
Q 022233 167 LGGKRVGI-----VGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPFYSNVCELAANCDILIICCGLT--A-- 232 (300)
Q Consensus 167 l~g~~vgI-----iG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~~~~l~e~l~~aDvV~l~~p~~--~-- 232 (300)
+. .+|++ +|=+++.++.+..+..+|++|.+..+..-... ......+++|+++++|+|..-.=.. .
T Consensus 167 l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~ 245 (324)
T 1js1_X 167 PK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDN 245 (324)
T ss_dssp CE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTC
T ss_pred ee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCcc
Confidence 55 79999 99999999999999999999988876432211 2344678999999999998833211 1
Q ss_pred -------hhhhcchHHHHhcCCCCcEEEEcC---CCcccCHH
Q 022233 233 -------ETHHMINKQVLSALGKEGVVINIG---RGPIIDEQ 264 (300)
Q Consensus 233 -------~t~~li~~~~l~~mk~ga~lIn~s---rg~~vd~~ 264 (300)
...-.++.+.++.+| +++|.-+. ||.=|+.+
T Consensus 246 ~~~~~~r~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~e 286 (324)
T 1js1_X 246 YGQILSTDRNWTVGDRQMAVTN-NAYFMHCLPVRRNMIVTDD 286 (324)
T ss_dssp TTCCCCCCTTSSBCHHHHTTSS-SCEEECCSCCCBTTTBCHH
T ss_pred ccchHHHhcCcccCHHHHHhcC-CcEEECCCCCCCCcccCHH
Confidence 012356889999888 99998886 56555544
No 443
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.31 E-value=0.04 Score=50.76 Aligned_cols=82 Identities=17% Similarity=0.141 Sum_probs=50.2
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEEEE-CCCCCCC------CC--------------------CcccCCHHHHhhcC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSISYN-SRTKKPS------VS--------------------YPFYSNVCELAANC 221 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~~~-~~~~~~~------~~--------------------~~~~~~l~e~l~~a 221 (300)
.+|||+|+|+||+.+++.|... +++|.+. +.++... .+ .....+.++++.++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3899999999999999998876 5776544 3321110 00 00011344556789
Q ss_pred CEEEEecCCChhhhhcchHHH-HhcCCCCcEEEEcC
Q 022233 222 DILIICCGLTAETHHMINKQV-LSALGKEGVVINIG 256 (300)
Q Consensus 222 DvV~l~~p~~~~t~~li~~~~-l~~mk~ga~lIn~s 256 (300)
|+|+.|+|.....+ .. -..++.|..+|..+
T Consensus 83 DiV~eatg~~~s~~-----~a~~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKIGKQ-----NLENIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTHHHH-----HHHHTTTTTTCEEEECT
T ss_pred CEEEECCCccccHH-----HHHHHHHHCCCEEEECC
Confidence 99999988543222 11 24567777766544
No 444
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=95.29 E-value=0.024 Score=50.62 Aligned_cols=94 Identities=15% Similarity=0.213 Sum_probs=61.4
Q ss_pred ccCCCEEEEEecC-h--hHHHHHHHHHhCCCEEEEECCCCCCC----------C-------CCcccCCHHHHhh------
Q 022233 166 KLGGKRVGIVGLG-S--IGSLVAKRLDAFGCSISYNSRTKKPS----------V-------SYPFYSNVCELAA------ 219 (300)
Q Consensus 166 ~l~g~~vgIiG~G-~--IG~~~A~~l~~~g~~V~~~~~~~~~~----------~-------~~~~~~~l~e~l~------ 219 (300)
.+.||++.|.|.+ . ||+++|+.|...|++|++.+|+.... . ......+++++++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 5899999999984 4 99999999999999999888763210 0 1111123333433
Q ss_pred -cCCEEEEecCCCh-------------h-hhh----------cchHHHHhcCCCCcEEEEcCCCc
Q 022233 220 -NCDILIICCGLTA-------------E-THH----------MINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 220 -~aDvV~l~~p~~~-------------~-t~~----------li~~~~l~~mk~ga~lIn~srg~ 259 (300)
.-|+++.+.-... + -.. .+.+..+..|+++..|||+|...
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~ 172 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYG 172 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGG
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehh
Confidence 6799998765331 0 000 12244567788888999987643
No 445
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.29 E-value=0.056 Score=51.99 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=67.0
Q ss_pred ccCCCEEEEEecC----------hhHHHHHHHHHhCCCEEEEECCCCCCCC----------------CCcccCCHHHHhh
Q 022233 166 KLGGKRVGIVGLG----------SIGSLVAKRLDAFGCSISYNSRTKKPSV----------------SYPFYSNVCELAA 219 (300)
Q Consensus 166 ~l~g~~vgIiG~G----------~IG~~~A~~l~~~g~~V~~~~~~~~~~~----------------~~~~~~~l~e~l~ 219 (300)
.+.|++|+|+|+- .=...+++.|...|.+|.+||+...... ......++.++++
T Consensus 325 ~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (478)
T 2y0c_A 325 DLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAAR 404 (478)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHTT
T ss_pred cCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHHh
Confidence 4789999999984 3567899999999999999999743210 1223457889999
Q ss_pred cCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHH
Q 022233 220 NCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQ 264 (300)
Q Consensus 220 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~ 264 (300)
+||+|++++.-.+ -+.+--..+.+.|+. .+++|+ |+- .|.+
T Consensus 405 ~ad~~vi~t~~~~-f~~~~~~~~~~~~~~-~~i~D~-r~~-~~~~ 445 (478)
T 2y0c_A 405 DADALVIVTEWKI-FKSPDFVALGRLWKT-PVIFDG-RNL-YEPE 445 (478)
T ss_dssp TCSEEEECSCCGG-GGSCCHHHHHTTCSS-CEEEES-SCC-SCHH
T ss_pred CCCEEEEecCChH-hhccCHHHHHhhcCC-CEEEEC-CCC-CCHH
Confidence 9999999987543 333322344556664 789998 554 4544
No 446
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.28 E-value=0.014 Score=53.67 Aligned_cols=84 Identities=20% Similarity=0.213 Sum_probs=50.9
Q ss_pred CEEEEEecChhHHHHHHHHHhC---CCEEEEE-CCC-----------C--CCCC--------------CC--cc--cCCH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF---GCSISYN-SRT-----------K--KPSV--------------SY--PF--YSNV 214 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~---g~~V~~~-~~~-----------~--~~~~--------------~~--~~--~~~l 214 (300)
.+|||+|+|.||+.+.|.|... .++|.+. ++. . .... +. .. ..++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 3799999999999999998765 4787644 431 0 0000 00 01 1144
Q ss_pred HHH-hh--cCCEEEEecCCChhhhhcchHHHHhcCCCCc--EEEEcCCC
Q 022233 215 CEL-AA--NCDILIICCGLTAETHHMINKQVLSALGKEG--VVINIGRG 258 (300)
Q Consensus 215 ~e~-l~--~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga--~lIn~srg 258 (300)
+++ +. ++|+|+.|+|.....+ .-. ..++.|+ ++|+.+..
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~s~e--~a~---~~l~aGakkvVId~~a~ 124 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFRNRE--KAE---LHLQAGAKKVIITAPAK 124 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHH--HHT---HHHHTTCSEEEESSCCB
T ss_pred HHCcccccCCCEEEECCccchhHH--HHH---HHHHcCCcEEEEeCCCC
Confidence 444 33 7999999998543322 112 2245678 89988653
No 447
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=95.26 E-value=0.062 Score=47.88 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=33.1
Q ss_pred cccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCC
Q 022233 165 SKLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRT 201 (300)
Q Consensus 165 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~ 201 (300)
.++.||++.|.|. |.||+++|+.|...|++|.+.+++
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3588999999996 689999999999999999988775
No 448
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=95.24 E-value=0.046 Score=48.22 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=33.4
Q ss_pred cccCCCEEEEEec-Ch--hHHHHHHHHHhCCCEEEEECCCC
Q 022233 165 SKLGGKRVGIVGL-GS--IGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 165 ~~l~g~~vgIiG~-G~--IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
..+.||++.|.|. |. ||+++|+.|...|++|++.+|+.
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 3588999999996 45 99999999999999999988865
No 449
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.24 E-value=0.014 Score=53.12 Aligned_cols=63 Identities=19% Similarity=0.220 Sum_probs=46.3
Q ss_pred CEEEEEecChhHHHHHHHHHhCCCEEE-EECCCCC-CCC---------C--CcccCCHHHHhhc--CCEEEEecCCChh
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAFGCSIS-YNSRTKK-PSV---------S--YPFYSNVCELAAN--CDILIICCGLTAE 233 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~g~~V~-~~~~~~~-~~~---------~--~~~~~~l~e~l~~--aDvV~l~~p~~~~ 233 (300)
.+|||||+|.+|+..++.+ .-+++|. ++|+++. ... + ...+.++++++++ .|+|++++|....
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H 80 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLN 80 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchH
Confidence 4899999999999877777 5567775 6787652 210 2 2456899999975 8999999985443
No 450
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=95.22 E-value=0.016 Score=48.47 Aligned_cols=63 Identities=19% Similarity=0.178 Sum_probs=44.8
Q ss_pred CCCEEEEEe-cChhHHHHHHHHHhCCC--EEEEECCCCCCCC-CCc-ccCCH------HHHhhcCCEEEEecCCCh
Q 022233 168 GGKRVGIVG-LGSIGSLVAKRLDAFGC--SISYNSRTKKPSV-SYP-FYSNV------CELAANCDILIICCGLTA 232 (300)
Q Consensus 168 ~g~~vgIiG-~G~IG~~~A~~l~~~g~--~V~~~~~~~~~~~-~~~-~~~~l------~e~l~~aDvV~l~~p~~~ 232 (300)
.+++|.|.| .|.||+.+++.|...|. +|.+.+|++.... ... ...++ .+++ +|+|+.+.....
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 468999999 79999999999999998 9999888765311 111 11232 2333 899998876543
No 451
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.21 E-value=0.028 Score=53.35 Aligned_cols=85 Identities=19% Similarity=0.194 Sum_probs=61.2
Q ss_pred CCCEEEEEecC----------hhHHHHHHHHHhCCCEEEEECCCCCCCC--------C--------CcccCCHHHHhhcC
Q 022233 168 GGKRVGIVGLG----------SIGSLVAKRLDAFGCSISYNSRTKKPSV--------S--------YPFYSNVCELAANC 221 (300)
Q Consensus 168 ~g~~vgIiG~G----------~IG~~~A~~l~~~g~~V~~~~~~~~~~~--------~--------~~~~~~l~e~l~~a 221 (300)
.|++|+|+|+. .-...+++.|...|.+|.+||+...... + .....++.+.+++|
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 58999999997 5688999999999999999998522110 0 12345788999999
Q ss_pred CEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCc
Q 022233 222 DILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGP 259 (300)
Q Consensus 222 DvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~ 259 (300)
|+|++++.-. +-+. ++ .+.|+ +.+++|+ |+-
T Consensus 392 d~~vi~~~~~-~~~~-~~---~~~~~-~~~i~D~-r~~ 422 (436)
T 1mv8_A 392 DVLVLGNGDE-LFVD-LV---NKTPS-GKKLVDL-VGF 422 (436)
T ss_dssp SEEEECSCCG-GGHH-HH---HSCCT-TCEEEES-SSC
T ss_pred cEEEEeCCcH-HHHh-hh---HHhcC-CCEEEEC-CCC
Confidence 9999998753 3221 12 34565 6788998 543
No 452
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.21 E-value=0.032 Score=50.38 Aligned_cols=65 Identities=15% Similarity=0.075 Sum_probs=49.0
Q ss_pred ccCCCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCC----------------CC-------CcccCCHHHHhhcC
Q 022233 166 KLGGKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPS----------------VS-------YPFYSNVCELAANC 221 (300)
Q Consensus 166 ~l~g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------------~~-------~~~~~~l~e~l~~a 221 (300)
.+.+++|.|.| .|.||+.+++.|...|++|.+.+|..... .. .....++.++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 36789999999 59999999999999999999998865421 11 11123466778899
Q ss_pred CEEEEecCC
Q 022233 222 DILIICCGL 230 (300)
Q Consensus 222 DvV~l~~p~ 230 (300)
|+|+.+...
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 998887653
No 453
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=95.19 E-value=0.044 Score=48.19 Aligned_cols=66 Identities=23% Similarity=0.277 Sum_probs=45.8
Q ss_pred cccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCCC-------cccCCHHHHh-------hcCCEEEEecC
Q 022233 165 SKLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVSY-------PFYSNVCELA-------ANCDILIICCG 229 (300)
Q Consensus 165 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~~-------~~~~~l~e~l-------~~aDvV~l~~p 229 (300)
..+.||++.|.|. |.||+++|+.|...|++|...+|+....... ....+.++++ ...|+|+.+.-
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg 103 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG 103 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4689999999997 5799999999999999999999876543211 1111222222 36899988764
Q ss_pred C
Q 022233 230 L 230 (300)
Q Consensus 230 ~ 230 (300)
.
T Consensus 104 ~ 104 (266)
T 3uxy_A 104 V 104 (266)
T ss_dssp C
T ss_pred C
Confidence 3
No 454
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.18 E-value=0.037 Score=49.85 Aligned_cols=66 Identities=21% Similarity=0.109 Sum_probs=46.1
Q ss_pred cccCCCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCC-------CCC-------cccCCHHHHhhc--CCEEEEe
Q 022233 165 SKLGGKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPS-------VSY-------PFYSNVCELAAN--CDILIIC 227 (300)
Q Consensus 165 ~~l~g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-------~~~-------~~~~~l~e~l~~--aDvV~l~ 227 (300)
..+.+++|.|.| .|.||+.+++.|...|++|.+.+|+.... ... ....++++++++ .|+|+.+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEEC
Confidence 457899999998 69999999999999999999988764321 011 111235567777 9999887
Q ss_pred cCC
Q 022233 228 CGL 230 (300)
Q Consensus 228 ~p~ 230 (300)
...
T Consensus 97 A~~ 99 (333)
T 2q1w_A 97 AAS 99 (333)
T ss_dssp CCC
T ss_pred cee
Confidence 653
No 455
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.15 E-value=0.027 Score=51.67 Aligned_cols=85 Identities=20% Similarity=0.359 Sum_probs=59.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc---cC-----CHH-HHh----hcCCEEEEecC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF---YS-----NVC-ELA----ANCDILIICCG 229 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~---~~-----~l~-e~l----~~aDvV~l~~p 229 (300)
|.+|.|+|.|.+|...++.++.+|. +|++.+++++.. .++.. .. ++. ++. ...|+|+-++.
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 251 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTG 251 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCC
Confidence 7799999999999999999999999 899888765421 13211 11 111 121 25899999886
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
.... -...+..++++..++.++-+
T Consensus 252 ~~~~-----~~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 252 AEAS-----IQAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CHHH-----HHHHHHHSCTTCEEEECSCC
T ss_pred ChHH-----HHHHHHHhcCCCEEEEEecC
Confidence 4322 24567889999999998743
No 456
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.15 E-value=0.022 Score=48.63 Aligned_cols=63 Identities=17% Similarity=0.096 Sum_probs=47.5
Q ss_pred CCCEEEEEe-cChhHHHHHHHHHhC--CCEEEEECCCCCCC----C-------CCcccCCHHHHhhcCCEEEEecCC
Q 022233 168 GGKRVGIVG-LGSIGSLVAKRLDAF--GCSISYNSRTKKPS----V-------SYPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 168 ~g~~vgIiG-~G~IG~~~A~~l~~~--g~~V~~~~~~~~~~----~-------~~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
.+++|.|.| .|.||+.+++.|... |++|...+|++... . ......++++++++.|+|+.+...
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 478999999 699999999999998 89999988864210 0 111223566788999999987653
No 457
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.14 E-value=0.03 Score=51.13 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=47.7
Q ss_pred ccCCCEEEEEe-cChhHHHHHHHHHhC-CCEEEEECCCCCCCC------C-------Cc-ccCCHHHHhhcCCEEEEecC
Q 022233 166 KLGGKRVGIVG-LGSIGSLVAKRLDAF-GCSISYNSRTKKPSV------S-------YP-FYSNVCELAANCDILIICCG 229 (300)
Q Consensus 166 ~l~g~~vgIiG-~G~IG~~~A~~l~~~-g~~V~~~~~~~~~~~------~-------~~-~~~~l~e~l~~aDvV~l~~p 229 (300)
.+.+++|.|.| .|.||+.+++.|... |++|.+.+|+..... + .. ...++.++++++|+|+.+..
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 46789999999 699999999999987 999999988764321 1 11 12245667889999987654
Q ss_pred C
Q 022233 230 L 230 (300)
Q Consensus 230 ~ 230 (300)
.
T Consensus 101 ~ 101 (372)
T 3slg_A 101 I 101 (372)
T ss_dssp C
T ss_pred c
Confidence 3
No 458
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.14 E-value=0.015 Score=53.04 Aligned_cols=85 Identities=26% Similarity=0.237 Sum_probs=59.8
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC---CC-Ccc-----cCCHHHHhh-----cCCEEEEecCCCh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS---VS-YPF-----YSNVCELAA-----NCDILIICCGLTA 232 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~---~~-~~~-----~~~l~e~l~-----~aDvV~l~~p~~~ 232 (300)
.|.+|.|+|.|.+|..+++.++.+|+ +|++.+++++.. .. +.. ..++.+.+. ..|+|+-++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 68899999999999999999999999 899988764321 01 111 123444333 5899999886422
Q ss_pred hhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 233 ETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 233 ~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
. -...+..|+++..+|.++.
T Consensus 244 ~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 244 A-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp H-----HHHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHHHhcCCEEEEEec
Confidence 2 2455677888888888764
No 459
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=95.13 E-value=0.074 Score=48.31 Aligned_cols=96 Identities=15% Similarity=0.259 Sum_probs=62.6
Q ss_pred CEEEEEe-cChhHHHHHHHHHh---CCCEEEEECCCCCCC--------CCC--ccc----CCHHHHhhcCCEEEEecCCC
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDA---FGCSISYNSRTKKPS--------VSY--PFY----SNVCELAANCDILIICCGLT 231 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~---~g~~V~~~~~~~~~~--------~~~--~~~----~~l~e~l~~aDvV~l~~p~~ 231 (300)
++|+||| .|.+|+++|..|.. +..++..+|...... ... ... .+..+.+++||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 5899999 99999999999975 335788999875210 011 111 24678899999999987532
Q ss_pred --h-hhh-hcc--hH----H---HHhcCCCCcEEEEcCCCcccCHHHHH
Q 022233 232 --A-ETH-HMI--NK----Q---VLSALGKEGVVINIGRGPIIDEQELV 267 (300)
Q Consensus 232 --~-~t~-~li--~~----~---~l~~mk~ga~lIn~srg~~vd~~aL~ 267 (300)
+ .++ .++ |. + .+....|.+++++++ .++|.-..+
T Consensus 81 rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 81 RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 1 111 122 11 1 122336889999995 678777666
No 460
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.13 E-value=0.0074 Score=50.41 Aligned_cols=85 Identities=16% Similarity=0.289 Sum_probs=58.4
Q ss_pred CCCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc-----cCCHHH-H---h--hcCCEEEEecCC
Q 022233 168 GGKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF-----YSNVCE-L---A--ANCDILIICCGL 230 (300)
Q Consensus 168 ~g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~-----~~~l~e-~---l--~~aDvV~l~~p~ 230 (300)
.|++|.|+| .|.||+.+++.++..|++|+..+++.+.. .+... ..+..+ + . ...|+|+.+..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 478999999 69999999999999999999888764321 12111 112222 2 2 14799888763
Q ss_pred ChhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 231 TAETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 231 ~~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
. . .....+..|+++..+|+++..
T Consensus 117 ~-~----~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 117 G-E----AIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp T-H----HHHHHHHTEEEEEEEEECSCG
T ss_pred h-H----HHHHHHHHhccCCEEEEEcCC
Confidence 2 1 235667888999999998754
No 461
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.08 E-value=0.023 Score=52.26 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=52.7
Q ss_pred CEEEEEecChhHHHHHHHHHhC-CCEEEE-ECC-CCCC-------------CCCC----------------c--ccCCHH
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-GCSISY-NSR-TKKP-------------SVSY----------------P--FYSNVC 215 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-g~~V~~-~~~-~~~~-------------~~~~----------------~--~~~~l~ 215 (300)
.+|||+|+|+||+.+++.+... +++|.+ .++ .... .... . ...+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 4899999999999999998753 578764 453 1110 0000 0 012455
Q ss_pred HH-h--hcCCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 216 EL-A--ANCDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 216 e~-l--~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
++ + .++|+|+.|+|.....+ ..-..++.|+..|+++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~~e-----~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTTME-----KAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCSHH-----HHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhhHH-----HHHHHHhCCCeEEEeccC
Confidence 55 2 57999999998543322 233456778777777655
No 462
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=95.07 E-value=0.03 Score=49.76 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=40.5
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC----CCCcccCCHHHHhhc--CCEEEEecCC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS----VSYPFYSNVCELAAN--CDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~----~~~~~~~~l~e~l~~--aDvV~l~~p~ 230 (300)
+|+|.|.|. |.||+.+++.|...|++|.+.+|+.... .......++.++++. .|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence 679999997 9999999999999999999998764321 011123456667765 8998887643
No 463
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.04 E-value=0.013 Score=53.30 Aligned_cols=85 Identities=13% Similarity=0.184 Sum_probs=58.9
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc-----cCCHHHHhh----cCCEEEEecCCChh
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF-----YSNVCELAA----NCDILIICCGLTAE 233 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~-----~~~l~e~l~----~aDvV~l~~p~~~~ 233 (300)
.|.+|.|+|.|.||...++.++.+|.+|++.+++++.. .++.. ..++.+.+. ..|+|+.+....+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 37899999999999999999999999999988765421 12211 123333332 57999888653322
Q ss_pred hhhcchHHHHhcCCCCcEEEEcCC
Q 022233 234 THHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 234 t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
-...+..++++..++.++-
T Consensus 246 -----~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 246 -----FSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp -----HHHHHHHEEEEEEEEECSC
T ss_pred -----HHHHHHHhccCCEEEEeCC
Confidence 2355677888888888753
No 464
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.02 E-value=0.04 Score=50.69 Aligned_cols=64 Identities=19% Similarity=0.212 Sum_probs=48.3
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CC-------cccCCHHHHhhcCCEEEEecCC
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SY-------PFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~-------~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
..+++|.|.|. |.||+.+++.|...|++|.+.+|+..... .. ....++.++++.+|+|+.+...
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~ 103 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 103 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence 35789999998 99999999999999999999888654321 11 1122456778899999877653
No 465
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.01 E-value=0.027 Score=53.47 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=69.0
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC------CCCccc--CCHHHHhhcCCEEEEecCC---Chhhh
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS------VSYPFY--SNVCELAANCDILIICCGL---TAETH 235 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~~~~~--~~l~e~l~~aDvV~l~~p~---~~~t~ 235 (300)
+.+|+|.|||+|..|.+.|+.|+..|++|.++|.+.... .+.... ....+.+..+|.|++.-.. .|...
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~~~ 82 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLS 82 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSCTTSCEEESSCCHHHHHTCSEEEECTTSCTTCHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhhCCCEEEECCCcHHHhccCCEEEeCCCCCCCCHHHH
Confidence 568999999999999999999999999999998754332 122211 1124566789999987422 23322
Q ss_pred -------hcchH-HHH-hcCCCCcEEEEcCCCcccCHHHHHHHHHhCC
Q 022233 236 -------HMINK-QVL-SALGKEGVVINIGRGPIIDEQELVRCLVQGE 274 (300)
Q Consensus 236 -------~li~~-~~l-~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~ 274 (300)
.++.+ +.+ ..++...+-|-=+.|.---..-|...|++..
T Consensus 83 ~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g 130 (439)
T 2x5o_A 83 AAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAG 130 (439)
T ss_dssp HHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 12322 122 2345445566666777776666667776643
No 466
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.97 E-value=0.017 Score=52.78 Aligned_cols=84 Identities=23% Similarity=0.279 Sum_probs=58.3
Q ss_pred CCCEEEEEecChhHHHHHHHHHhC--CCEEEEECCCCCCC-----CCCcccCCH---H---HHhh---cCCEEEEecCCC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAF--GCSISYNSRTKKPS-----VSYPFYSNV---C---ELAA---NCDILIICCGLT 231 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~--g~~V~~~~~~~~~~-----~~~~~~~~l---~---e~l~---~aDvV~l~~p~~ 231 (300)
.|.+|.|+|.|.||...++.++.+ |.+|++.+++++.. .++....+. + +.+. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 588999999999999999999999 99999998765431 133221111 1 1222 579999988643
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~s 256 (300)
.. -...+..++++..++.++
T Consensus 250 ~~-----~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 250 ET-----TYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp HH-----HHHHHHHEEEEEEEEECC
T ss_pred HH-----HHHHHHHhhcCCEEEEeC
Confidence 22 235567788888888776
No 467
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.96 E-value=0.041 Score=49.86 Aligned_cols=65 Identities=17% Similarity=0.117 Sum_probs=49.2
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC----------------CCC-------cccCCHHHHhhcC
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS----------------VSY-------PFYSNVCELAANC 221 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------------~~~-------~~~~~l~e~l~~a 221 (300)
.+.+++|.|.|. |.||+.+++.|...|++|.+.+|+.... ... ....++.++++.+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 477899999998 9999999999999999999988764310 111 1122456778899
Q ss_pred CEEEEecCC
Q 022233 222 DILIICCGL 230 (300)
Q Consensus 222 DvV~l~~p~ 230 (300)
|+|+.+...
T Consensus 104 d~vih~A~~ 112 (352)
T 1sb8_A 104 DYVLHQAAL 112 (352)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCcc
Confidence 999887764
No 468
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.95 E-value=0.043 Score=47.96 Aligned_cols=38 Identities=34% Similarity=0.500 Sum_probs=33.8
Q ss_pred ccCCCEEEEEecC---hhHHHHHHHHHhCCCEEEEECCCCC
Q 022233 166 KLGGKRVGIVGLG---SIGSLVAKRLDAFGCSISYNSRTKK 203 (300)
Q Consensus 166 ~l~g~~vgIiG~G---~IG~~~A~~l~~~g~~V~~~~~~~~ 203 (300)
+|+||++.|-|.+ -||+++|+.|...|++|.+.+|+.+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER 43 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 5899999999974 5999999999999999999888643
No 469
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.93 E-value=0.13 Score=49.49 Aligned_cols=102 Identities=16% Similarity=0.170 Sum_probs=57.1
Q ss_pred CCEEEEEecChhHHHHHHHHHh-CCC---EEEEECCCCCCCCCCcccCCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDA-FGC---SISYNSRTKKPSVSYPFYSNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~-~g~---~V~~~~~~~~~~~~~~~~~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
.++|.|||+|.||+.+|+.|.. .++ +|++.|+.... .++.+... ..+ .....++... .+.+-+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-------~~~~~~~g-~~~--~~~~Vdadnv---~~~l~a 79 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-------VDVAQQYG-VSF--KLQQITPQNY---LEVIGS 79 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-------CCHHHHHT-CEE--EECCCCTTTH---HHHTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhh-------hhHHhhcC-Cce--eEEeccchhH---HHHHHH
Confidence 3479999999999999999885 455 67777654321 13333332 233 3333333211 111112
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC
Q 022233 245 ALGKEGVVINIGRGPIIDEQELVRCLVQGEIKGAGLDVFENEPD 288 (300)
Q Consensus 245 ~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~~a~LDV~~~EP~ 288 (300)
.++++-++||++ .....-+++++..+-++ ..+|.-. ||.
T Consensus 80 Ll~~~DvVIN~s--~~~~~l~Im~acleaGv--~YlDTa~-E~~ 118 (480)
T 2ph5_A 80 TLEENDFLIDVS--IGISSLALIILCNQKGA--LYINAAT-EPW 118 (480)
T ss_dssp GCCTTCEEEECC--SSSCHHHHHHHHHHHTC--EEEESSC-CCC
T ss_pred HhcCCCEEEECC--ccccCHHHHHHHHHcCC--CEEECCC-Ccc
Confidence 445557788865 33455555555555555 3478766 554
No 470
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=94.92 E-value=0.084 Score=47.96 Aligned_cols=35 Identities=29% Similarity=0.230 Sum_probs=29.2
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCC
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKK 203 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~ 203 (300)
+|+|.|.| .|.||+.+++.|...|++|++.+|+..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRAS 36 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 47899999 599999999999999999999888643
No 471
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=94.92 E-value=0.038 Score=51.76 Aligned_cols=62 Identities=18% Similarity=0.397 Sum_probs=44.9
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCCC----C--Cc------ccCCHHHHhhcCCEEEE
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPSV----S--YP------FYSNVCELAANCDILII 226 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----~--~~------~~~~l~e~l~~aDvV~l 226 (300)
+....+++|+|+|-|..|+.+++.++.+|++|.+++ ++.... . .. ....+.++++.+|+|+.
T Consensus 19 ~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 19 GHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 455678999999999999999999999999998877 432211 1 11 11235678889999875
No 472
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.91 E-value=0.027 Score=52.12 Aligned_cols=84 Identities=27% Similarity=0.400 Sum_probs=59.8
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc-----cCCHHHHhh--------cCCEEEEecC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF-----YSNVCELAA--------NCDILIICCG 229 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~-----~~~l~e~l~--------~aDvV~l~~p 229 (300)
|.+|.|+|.|.+|...++.++.+|+ +|++.+++++.. .++.. ..++.+.+. ..|+|+-++.
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG 262 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC
Confidence 7899999999999999999999999 888888765431 12211 134445444 3799998875
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
..+. -...+..++++..++.++-
T Consensus 263 ~~~~-----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 263 VAET-----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CHHH-----HHHHHHHEEEEEEEEECSC
T ss_pred CHHH-----HHHHHHHhccCCEEEEEec
Confidence 3222 2456677888998888863
No 473
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=94.89 E-value=0.021 Score=49.69 Aligned_cols=61 Identities=20% Similarity=0.345 Sum_probs=46.6
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC--C-------CcccCCHHHHhhcCCEEEEecCC
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV--S-------YPFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~--~-------~~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
++|.|.|. |.||+.+++.|...|++|++.+|+..... + .....++.+++++.|+|+.+...
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 58999997 99999999999999999999988764321 1 11123466788899999987653
No 474
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.89 E-value=0.019 Score=52.92 Aligned_cols=84 Identities=21% Similarity=0.259 Sum_probs=59.0
Q ss_pred CCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCCC-----CCCcc-----cCCHHHHh----h--cCCEEEEecCCC
Q 022233 168 GGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKPS-----VSYPF-----YSNVCELA----A--NCDILIICCGLT 231 (300)
Q Consensus 168 ~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~~-----~~~~~-----~~~l~e~l----~--~aDvV~l~~p~~ 231 (300)
.|.+|.|+|.|.||...++.++.+|.+|++.+++++.. .++.. ..++.+.+ . ..|+|+-++. .
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 47899999999999999999999999999888764321 12211 12333322 2 5899998876 2
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
+ .-...+..++++..++.++.
T Consensus 268 ~-----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 A-----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp S-----CHHHHHHHEEEEEEEEEECC
T ss_pred H-----HHHHHHHHhhcCCEEEEEec
Confidence 2 22456778888888888763
No 475
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=94.84 E-value=0.075 Score=47.16 Aligned_cols=60 Identities=20% Similarity=0.228 Sum_probs=43.9
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCCEEEEECC-CCCC---C------C-----------CCcccCCHHHHhhcCCEEEE
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSR-TKKP---S------V-----------SYPFYSNVCELAANCDILII 226 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~-~~~~---~------~-----------~~~~~~~l~e~l~~aDvV~l 226 (300)
||+|.|.| .|.||+.+++.|...|++|.+..| ++.. . . ......+++++++++|+|+.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 67899999 599999999999999999998776 4311 0 0 11112356778899999887
Q ss_pred ec
Q 022233 227 CC 228 (300)
Q Consensus 227 ~~ 228 (300)
+.
T Consensus 81 ~A 82 (322)
T 2p4h_X 81 TA 82 (322)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 476
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.83 E-value=0.043 Score=49.23 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=45.0
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CC-------cccCCHHHHhhcCCEEEEecCC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SY-------PFYSNVCELAANCDILIICCGL 230 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~-------~~~~~l~e~l~~aDvV~l~~p~ 230 (300)
.++|.|.|. |.||+.+++.|...|++|.+.+|+..... +. ....++.++++.+|+|+.+...
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 468999995 99999999999999999999888754321 11 1123456778899999887653
No 477
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=94.82 E-value=0.062 Score=46.43 Aligned_cols=64 Identities=20% Similarity=0.221 Sum_probs=45.8
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCC-------CcccCCHHHHhh-------cCCEEEEecC
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVS-------YPFYSNVCELAA-------NCDILIICCG 229 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~-------~~~~~~l~e~l~-------~aDvV~l~~p 229 (300)
.+.||++.|.|. |.||+.+|+.|...|++|++.+|+...... .....+++++++ ..|+|+.+.-
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 90 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG 90 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 478999999985 799999999999999999998887543221 111123334443 5699988764
No 478
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.79 E-value=0.039 Score=48.37 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=32.4
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCC
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
+.||++.|.|. |.||+.+|+.|...|++|+..+|+.
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~ 40 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE 40 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 67899999986 6899999999999999999988864
No 479
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.76 E-value=0.053 Score=50.00 Aligned_cols=82 Identities=15% Similarity=0.175 Sum_probs=50.3
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCC-CEEEEEC--CCCCCC-C----C-----------Cc-ccC--CHHHHhhcCCEEEE
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFG-CSISYNS--RTKKPS-V----S-----------YP-FYS--NVCELAANCDILII 226 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g-~~V~~~~--~~~~~~-~----~-----------~~-~~~--~l~e~l~~aDvV~l 226 (300)
.+|||+| .|.||+.+.+.|.... +++.... ++.... . + .. .+. +.++ +.++|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 5899999 8999999999998654 4775542 221110 0 0 00 011 3333 478999999
Q ss_pred ecCCChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 227 CCGLTAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 227 ~~p~~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
|+|.....+ +-..+ ++.|..+|+.+.
T Consensus 84 atp~~~s~~--~a~~~---~~aG~~VId~s~ 109 (350)
T 2ep5_A 84 ALPNELAES--IELEL---VKNGKIVVSNAS 109 (350)
T ss_dssp CCCHHHHHH--HHHHH---HHTTCEEEECSS
T ss_pred CCChHHHHH--HHHHH---HHCCCEEEECCc
Confidence 998543222 22222 356888999874
No 480
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=94.73 E-value=0.054 Score=51.65 Aligned_cols=105 Identities=17% Similarity=0.238 Sum_probs=69.2
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEE-EECCCC-----C-----------------CC---------CCCccc
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSIS-YNSRTK-----K-----------------PS---------VSYPFY 211 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~-~~~~~~-----~-----------------~~---------~~~~~~ 211 (300)
|.++.|+||.|-|+|++|+..|+.|...|.+|+ +.|.+. + .. .+....
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v 313 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF 313 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe
Confidence 456899999999999999999999999999885 555321 0 00 011111
Q ss_pred CCHHHHh-hcCCEEEEecCCChhhhhcchHHHHhcCC--CCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 212 SNVCELA-ANCDILIICCGLTAETHHMINKQVLSALG--KEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 212 ~~l~e~l-~~aDvV~l~~p~~~~t~~li~~~~l~~mk--~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
+.++++ ..||+++-|. +.+.|+.+-...+. +-.+++--+-+++-.+ | .+.|.+++|.
T Consensus 314 -~~~~i~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~e-A-~~iL~~rGI~ 373 (456)
T 3r3j_A 314 -ENQKPWNIPCDIAFPCA-----TQNEINENDADLFIQNKCKMIVEGANMPTHIK-A-LHKLKQNNII 373 (456)
T ss_dssp -CSCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHHTCCEEECCSSSCBCTT-H-HHHHHTTTCE
T ss_pred -CCccccccCccEEEeCC-----CccchhhHHHHHHHhcCCeEEEecCCCCCCHH-H-HHHHHHCCCE
Confidence 223333 4699888774 24557777666662 2357778888886433 3 4677777774
No 481
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=94.72 E-value=0.026 Score=51.88 Aligned_cols=28 Identities=29% Similarity=0.338 Sum_probs=23.5
Q ss_pred EEEEEecChhHHHHHHHHHhC-CCEEEEE
Q 022233 171 RVGIVGLGSIGSLVAKRLDAF-GCSISYN 198 (300)
Q Consensus 171 ~vgIiG~G~IG~~~A~~l~~~-g~~V~~~ 198 (300)
+|||+|+|.||+.+.|.|... .++|.+.
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivai 31 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAV 31 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEE
Confidence 799999999999999998765 4677544
No 482
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=94.68 E-value=0.093 Score=47.04 Aligned_cols=60 Identities=22% Similarity=0.232 Sum_probs=44.8
Q ss_pred CCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCC------------CC-------CcccCCHHHHhhcCCEEEEec
Q 022233 169 GKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPS------------VS-------YPFYSNVCELAANCDILIICC 228 (300)
Q Consensus 169 g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~------------~~-------~~~~~~l~e~l~~aDvV~l~~ 228 (300)
+++|.|.| .|.||+.+++.|...|++|.+..|+.... .. .....+++++++++|+|+-+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 78999999 79999999999999999998766653321 01 111245678889999888654
No 483
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.65 E-value=0.063 Score=49.20 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=57.5
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCCE-EEEECCCCCCCC-----C--C-cc------cCCHHHHh------hcCCEEEEe
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGCS-ISYNSRTKKPSV-----S--Y-PF------YSNVCELA------ANCDILIIC 227 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~~-V~~~~~~~~~~~-----~--~-~~------~~~l~e~l------~~aDvV~l~ 227 (300)
|.+|.|+|.|.+|...++.++.+|.+ |++.+++++... . . .+ ..++.+.+ ...|+|+-+
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~ 259 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALEC 259 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEEC
Confidence 77999999999999999999999997 888776543210 1 0 00 01222222 258999998
Q ss_pred cCCChhhhhcchHHHHhcCCCCcEEEEcCC
Q 022233 228 CGLTAETHHMINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 228 ~p~~~~t~~li~~~~l~~mk~ga~lIn~sr 257 (300)
+..... -...+..++++..++.++-
T Consensus 260 ~g~~~~-----~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 260 TGVESS-----IAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp SCCHHH-----HHHHHHHSCTTCEEEECCC
T ss_pred CCChHH-----HHHHHHHhcCCCEEEEEcc
Confidence 763221 2456778999999998864
No 484
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.64 E-value=0.028 Score=51.33 Aligned_cols=83 Identities=16% Similarity=0.260 Sum_probs=57.3
Q ss_pred CCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC-----CCcc----cCCHHHHh----h--cCCEEEEecCCC
Q 022233 168 GGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV-----SYPF----YSNVCELA----A--NCDILIICCGLT 231 (300)
Q Consensus 168 ~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~-----~~~~----~~~l~e~l----~--~aDvV~l~~p~~ 231 (300)
.|++|.|+|. |.||..+++.++.+|++|++.+++.+... ++.. ..++.+.+ . ..|+|+-++...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 4789999998 99999999999999999998887654311 2211 12333322 1 478888887532
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~s 256 (300)
.....+..++++..++.++
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 2345677888888888886
No 485
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=94.62 E-value=0.045 Score=47.20 Aligned_cols=92 Identities=23% Similarity=0.298 Sum_probs=57.3
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCCC-C----cccCCHHHHhhcC----CEEEEecCCCh-h--hhh
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSVS-Y----PFYSNVCELAANC----DILIICCGLTA-E--THH 236 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~~-~----~~~~~l~e~l~~a----DvV~l~~p~~~-~--t~~ 236 (300)
|++.|.|. |.||+.+|+.|...|++|+..+|+...... . ....++++++++. |+|+.+.-... . -+.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~ 81 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGN 81 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHH
Confidence 46777775 689999999999999999998887543211 1 1122445566555 99998764332 0 011
Q ss_pred ----------cchHHHHhcCCC--CcEEEEcCCCccc
Q 022233 237 ----------MINKQVLSALGK--EGVVINIGRGPII 261 (300)
Q Consensus 237 ----------li~~~~l~~mk~--ga~lIn~srg~~v 261 (300)
.+.+..++.|++ +..+||+|.....
T Consensus 82 ~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 82 VVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred HHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 112344555543 3788999876554
No 486
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.61 E-value=0.085 Score=48.57 Aligned_cols=79 Identities=18% Similarity=0.271 Sum_probs=54.2
Q ss_pred cccCCCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-------------CC-----------------C--cc-
Q 022233 165 SKLGGKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-------------VS-----------------Y--PF- 210 (300)
Q Consensus 165 ~~l~g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-------------~~-----------------~--~~- 210 (300)
..|.+++|.|||+|.+|..+|+.|...|. +++++|...-.. .+ . ..
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~ 111 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD 111 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence 35889999999999999999999999998 788886532100 00 0 00
Q ss_pred c----CCHHHHhhcCCEEEEecCCChhhhhcchHHHHh
Q 022233 211 Y----SNVCELAANCDILIICCGLTAETHHMINKQVLS 244 (300)
Q Consensus 211 ~----~~l~e~l~~aDvV~l~~p~~~~t~~li~~~~l~ 244 (300)
. ...+++++++|+|+.+. .+.+++..+++....
T Consensus 112 ~~~~~~~~~~~~~~~dvVv~~~-d~~~~r~~ln~~~~~ 148 (346)
T 1y8q_A 112 TEDIEKKPESFFTQFDAVCLTC-CSRDVIVKVDQICHK 148 (346)
T ss_dssp CSCGGGCCHHHHTTCSEEEEES-CCHHHHHHHHHHHHH
T ss_pred ecccCcchHHHhcCCCEEEEcC-CCHHHHHHHHHHHHH
Confidence 0 12356788899888765 466667666655433
No 487
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.61 E-value=0.072 Score=50.82 Aligned_cols=83 Identities=23% Similarity=0.287 Sum_probs=60.9
Q ss_pred ccCCCEEEEEecC----------hhHHHHHHHHHhCCCEEEEECCCCCCC------CCCcccCCHHHHhhcCCEEEEecC
Q 022233 166 KLGGKRVGIVGLG----------SIGSLVAKRLDAFGCSISYNSRTKKPS------VSYPFYSNVCELAANCDILIICCG 229 (300)
Q Consensus 166 ~l~g~~vgIiG~G----------~IG~~~A~~l~~~g~~V~~~~~~~~~~------~~~~~~~~l~e~l~~aDvV~l~~p 229 (300)
.+.|++|+|+|+. .=...+++.|...|.+|.+||+...+. .......+++++++++|.|++++.
T Consensus 330 ~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t~ 409 (444)
T 3vtf_A 330 GLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIATA 409 (444)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECSC
T ss_pred ccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEccC
Confidence 4789999999986 237789999999999999999864221 123345789999999999999976
Q ss_pred CChhhhhcchHHHHhcCCCCcEEEEcCCC
Q 022233 230 LTAETHHMINKQVLSALGKEGVVINIGRG 258 (300)
Q Consensus 230 ~~~~t~~li~~~~l~~mk~ga~lIn~srg 258 (300)
-.+ -+. ++ + ++.+++|+ |+
T Consensus 410 h~e-f~~-ld------~-~~~vv~D~-Rn 428 (444)
T 3vtf_A 410 WPQ-YEG-LD------Y-RGKVVVDG-RY 428 (444)
T ss_dssp CGG-GGG-SC------C-TTCEEEES-SC
T ss_pred CHH-HhC-CC------c-CCCEEEEC-CC
Confidence 432 222 22 2 46788886 54
No 488
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=94.59 E-value=0.022 Score=47.39 Aligned_cols=58 Identities=19% Similarity=0.361 Sum_probs=41.6
Q ss_pred EEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC-CCCcccCCHHHHhhc---CCEEEEecC
Q 022233 171 RVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS-VSYPFYSNVCELAAN---CDILIICCG 229 (300)
Q Consensus 171 ~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~-~~~~~~~~l~e~l~~---aDvV~l~~p 229 (300)
++.|.|. |.||+.+++.|. .|++|...+|+.... .......++++++++ .|+|+.+.-
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence 8888885 799999999999 999999988875411 112222345566655 798888754
No 489
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=94.58 E-value=0.058 Score=49.35 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=63.6
Q ss_pred CEEEEEecChhHHHHHHHHHhC-------CCEEE-EECCCCCCC---C------------C-Cc-ccCCHHHHhh--cCC
Q 022233 170 KRVGIVGLGSIGSLVAKRLDAF-------GCSIS-YNSRTKKPS---V------------S-YP-FYSNVCELAA--NCD 222 (300)
Q Consensus 170 ~~vgIiG~G~IG~~~A~~l~~~-------g~~V~-~~~~~~~~~---~------------~-~~-~~~~l~e~l~--~aD 222 (300)
.+|||+|+|.||+.+++.+... +.+|. +.+++.... . + .. ...+.++++. +.|
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~iD 84 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEAAD 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSCCS
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCCCC
Confidence 4899999999999999999763 45664 456543210 0 1 11 0115677764 489
Q ss_pred EEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHhCCc
Q 022233 223 ILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPII-DEQELVRCLVQGEI 275 (300)
Q Consensus 223 vV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~v-d~~aL~~aL~~~~i 275 (300)
+|+.++|.....+ ..-+.....++.|.-+|-..-+.+. .-+.|.++.++.+.
T Consensus 85 vVVe~T~~~~~~~-pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~ 137 (325)
T 3ing_A 85 LLVDCTPASRDGV-REYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSK 137 (325)
T ss_dssp EEEECCCCCSSSH-HHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEECCCCccccc-hHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCC
Confidence 9999998642111 0012344556778777766555543 45567776666555
No 490
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=94.53 E-value=0.13 Score=49.43 Aligned_cols=101 Identities=19% Similarity=0.391 Sum_probs=68.2
Q ss_pred ccCCCEEEEEecChhHHHHHHHHHhCCCEEEEE-CCCCC---CC-C-------------------CCcccCCHHHH-hhc
Q 022233 166 KLGGKRVGIVGLGSIGSLVAKRLDAFGCSISYN-SRTKK---PS-V-------------------SYPFYSNVCEL-AAN 220 (300)
Q Consensus 166 ~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~-~~~~~---~~-~-------------------~~~~~~~l~e~-l~~ 220 (300)
+|.|++|.|-|+|++|+..|+.|...|.+|+.. |.+.. +. . +.....+ ++ -..
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~--~il~~~ 318 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG--SILEVD 318 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS--CGGGSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc--cccccc
Confidence 488999999999999999999999999998753 32210 00 0 0011111 32 346
Q ss_pred CCEEEEecCCChhhhhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 221 CDILIICCGLTAETHHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 221 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
||+++=|. +++.|+.+-...++ -.+++-.+-++ ...+| .+.|.++.|.
T Consensus 319 ~DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p-~T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 319 CDILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGP-TTPEA-DKIFLERNIM 366 (501)
T ss_dssp CSEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSC-BCHHH-HHHHHHTTCE
T ss_pred ceEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCc-CCHHH-HHHHHHCCCE
Confidence 99888774 34567777777775 45778888887 45444 5677777774
No 491
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=94.53 E-value=0.12 Score=48.11 Aligned_cols=83 Identities=16% Similarity=0.233 Sum_probs=48.5
Q ss_pred CEEEEEe-cChhHHHHHH-HHHhCC---CEEEEECCCCC-CCC----C--Ccc--cCCHHHHhhcCCEEEEecCCChhhh
Q 022233 170 KRVGIVG-LGSIGSLVAK-RLDAFG---CSISYNSRTKK-PSV----S--YPF--YSNVCELAANCDILIICCGLTAETH 235 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~-~l~~~g---~~V~~~~~~~~-~~~----~--~~~--~~~l~e~l~~aDvV~l~~p~~~~t~ 235 (300)
++|||+| .|.+|+.+.+ .|...+ ..+..+..... ... + ... ..+.++ ++++|+|+.|+|.....+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~~s~~ 80 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGDYTNE 80 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHHHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCchhHHH
Confidence 4899999 9999999999 565544 34544332211 111 1 111 113344 589999999998432222
Q ss_pred hcchHHHHhcCCCCc--EEEEcCCC
Q 022233 236 HMINKQVLSALGKEG--VVINIGRG 258 (300)
Q Consensus 236 ~li~~~~l~~mk~ga--~lIn~srg 258 (300)
+-..+ .+.|+ ++||.+..
T Consensus 81 --~a~~~---~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 81 --IYPKL---RESGWQGYWIDAASS 100 (367)
T ss_dssp --HHHHH---HHTTCCCEEEECSST
T ss_pred --HHHHH---HHCCCCEEEEcCChh
Confidence 22222 24565 89998743
No 492
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.52 E-value=0.15 Score=45.56 Aligned_cols=105 Identities=17% Similarity=0.161 Sum_probs=70.7
Q ss_pred cCCCEEEEEecChhHHHHHHHHHhCCCEEEEECCCCCC--CCCCcccCCHHHHhhcCCEEEEecCCChh----------h
Q 022233 167 LGGKRVGIVGLGSIGSLVAKRLDAFGCSISYNSRTKKP--SVSYPFYSNVCELAANCDILIICCGLTAE----------T 234 (300)
Q Consensus 167 l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~~~~~~~~~--~~~~~~~~~l~e~l~~aDvV~l~~p~~~~----------t 234 (300)
+.|++|.|+|.-..-..+++.|...|++|.+....... ..+.....++.+.++++|+|++..|.... .
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccccC
Confidence 67889999999999999999999999999876532221 11223345677788999999875432110 1
Q ss_pred hhcchHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 235 HHMINKQVLSALGKEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 235 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
...++++.++.+++..++. + + +|.-++.+++.+.+|.
T Consensus 83 ~~~~~~~~l~~~~~l~~i~-~---G-~d~id~~~~~~~~gi~ 119 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNHCVVY-S---G-ISNTYLNQCMKKTNRT 119 (293)
T ss_dssp CCBCCHHHHHTSCTTCEEE-E---S-SCCHHHHHHHHHHTCE
T ss_pred CccchHHHHHhCCCCCEEE-e---c-CCCHHHHHHHHHcCCe
Confidence 1136788899998877765 2 2 3666665566665554
No 493
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.49 E-value=0.063 Score=51.38 Aligned_cols=105 Identities=10% Similarity=0.131 Sum_probs=66.4
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHHhCCCEEE-EECCC-----CCCC-------------------C-------CCccc
Q 022233 164 GSKLGGKRVGIVGLGSIGSLVAKRLDAFGCSIS-YNSRT-----KKPS-------------------V-------SYPFY 211 (300)
Q Consensus 164 g~~l~g~~vgIiG~G~IG~~~A~~l~~~g~~V~-~~~~~-----~~~~-------------------~-------~~~~~ 211 (300)
|.++.|++|.|-|+|++|+..|+.|...|.+|+ +.|.+ ++-. . +....
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 456889999999999999999999999999987 44431 0000 0 01111
Q ss_pred CCHHHH-hhcCCEEEEecCCChhhhhcchHHHHhcC-C-CCcEEEEcCCCcccCHHHHHHHHHhCCce
Q 022233 212 SNVCEL-AANCDILIICCGLTAETHHMINKQVLSAL-G-KEGVVINIGRGPIIDEQELVRCLVQGEIK 276 (300)
Q Consensus 212 ~~l~e~-l~~aDvV~l~~p~~~~t~~li~~~~l~~m-k-~ga~lIn~srg~~vd~~aL~~aL~~~~i~ 276 (300)
+.+++ -..||+++-|. +.+.|+.+-...+ + +-.+++--+-+++ ..+| .+.|++++|.
T Consensus 327 -~~~~~~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 327 -PNEKPWGVPCTLAFPCA-----TQNDVDLDQAKLLQKNGCILVGEGANMPS-TVDA-INLFKSNNII 386 (470)
T ss_dssp -SSCCTTSSCCSEEEECS-----STTCBCSHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred -cCcCeeecCccEEEecc-----ccCcCCHHHHHHHHhcCcEEEEeCCCCCC-CHHH-HHHHHHCCcE
Confidence 11222 24789888775 2445665555554 1 2236666677764 5555 6778888775
No 494
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=94.48 E-value=0.046 Score=50.25 Aligned_cols=82 Identities=16% Similarity=0.170 Sum_probs=48.0
Q ss_pred CEEEEEe-cChhHHHHHHHHHhCC---CEEEEE-CCCCCCC-C---CCc-ccCCH-HHHhhcCCEEEEecCCChhhhhcc
Q 022233 170 KRVGIVG-LGSIGSLVAKRLDAFG---CSISYN-SRTKKPS-V---SYP-FYSNV-CELAANCDILIICCGLTAETHHMI 238 (300)
Q Consensus 170 ~~vgIiG-~G~IG~~~A~~l~~~g---~~V~~~-~~~~~~~-~---~~~-~~~~l-~e~l~~aDvV~l~~p~~~~t~~li 238 (300)
++|+|+| .|.+|+.+.+.|...+ .++... +++.... . +.. ...++ .+.+.++|+|+.|+|.... ....
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~~~~~~~DvV~~a~g~~~s-~~~a 85 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAAEVS-RAHA 85 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSCHHHH-HHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCHHHhcCCCEEEEcCCcHHH-HHHH
Confidence 5899999 8999999999998433 355443 4432211 0 100 01111 1236789999999984432 2111
Q ss_pred hHHHHhcCCCCcEEEEcC
Q 022233 239 NKQVLSALGKEGVVINIG 256 (300)
Q Consensus 239 ~~~~l~~mk~ga~lIn~s 256 (300)
.. .++.|+.+|+.|
T Consensus 86 -~~---~~~aG~kvId~S 99 (340)
T 2hjs_A 86 -ER---ARAAGCSVIDLS 99 (340)
T ss_dssp -HH---HHHTTCEEEETT
T ss_pred -HH---HHHCCCEEEEeC
Confidence 12 234588888876
No 495
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=94.47 E-value=0.058 Score=48.88 Aligned_cols=63 Identities=21% Similarity=0.210 Sum_probs=46.7
Q ss_pred cCCCEEEEEe-cChhHHHHHHHHHhCCCEEEEECCCCCCCC----------CC-------cccCCHHHHhhc--CCEEEE
Q 022233 167 LGGKRVGIVG-LGSIGSLVAKRLDAFGCSISYNSRTKKPSV----------SY-------PFYSNVCELAAN--CDILII 226 (300)
Q Consensus 167 l~g~~vgIiG-~G~IG~~~A~~l~~~g~~V~~~~~~~~~~~----------~~-------~~~~~l~e~l~~--aDvV~l 226 (300)
+.+++|.|.| .|.||+.+++.|...|++|.+.+|+..... .. ....++.++++. .|+|+.
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 6789999999 599999999999999999999888654321 11 111234566665 799888
Q ss_pred ecC
Q 022233 227 CCG 229 (300)
Q Consensus 227 ~~p 229 (300)
+..
T Consensus 87 ~A~ 89 (357)
T 1rkx_A 87 MAA 89 (357)
T ss_dssp CCS
T ss_pred CCC
Confidence 765
No 496
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=94.41 E-value=0.056 Score=49.49 Aligned_cols=34 Identities=26% Similarity=0.241 Sum_probs=30.6
Q ss_pred CEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCC
Q 022233 170 KRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKK 203 (300)
Q Consensus 170 ~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~ 203 (300)
++|.|.|. |.||+.+++.|...|++|.+.+|+..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~ 63 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 63 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence 68999997 99999999999999999998887654
No 497
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.41 E-value=0.1 Score=45.96 Aligned_cols=92 Identities=23% Similarity=0.298 Sum_probs=59.3
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCC----------CC---------CcccCCHHHHhh------
Q 022233 166 KLGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPS----------VS---------YPFYSNVCELAA------ 219 (300)
Q Consensus 166 ~l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~----------~~---------~~~~~~l~e~l~------ 219 (300)
.+.||++.|.|. |.||+++|+.|...|++|.+.+++.... .+ .....+++++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 588999999996 5799999999999999998775443110 01 111123334444
Q ss_pred -cCCEEEEecCCCh---------h-hhh----------cchHHHHhcCCCCcEEEEcCC
Q 022233 220 -NCDILIICCGLTA---------E-THH----------MINKQVLSALGKEGVVINIGR 257 (300)
Q Consensus 220 -~aDvV~l~~p~~~---------~-t~~----------li~~~~l~~mk~ga~lIn~sr 257 (300)
..|+++.+.-... + -+. .+.+..+..|+++..+||++.
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 6899998754211 1 011 123445677888888999865
No 498
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.36 E-value=0.11 Score=43.99 Aligned_cols=61 Identities=15% Similarity=0.103 Sum_probs=43.2
Q ss_pred CCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCCCCCC------CCcccCCHHHHhh------cCCEEEEecC
Q 022233 169 GKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTKKPSV------SYPFYSNVCELAA------NCDILIICCG 229 (300)
Q Consensus 169 g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~~~~~------~~~~~~~l~e~l~------~aDvV~l~~p 229 (300)
+|++.|.|. |.||+.+|+.|...|++|++.+|+..... ......+++++++ ..|+|+.+..
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 678999985 79999999999999999999888754111 1111234455555 6788887653
No 499
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.35 E-value=0.026 Score=51.59 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=57.0
Q ss_pred CCEEEEEecChhHHHHHHHHHhCCC-EEEEECCCCCCC-----CCCcc-----cCCHHHHh----h--cCCEEEEecCCC
Q 022233 169 GKRVGIVGLGSIGSLVAKRLDAFGC-SISYNSRTKKPS-----VSYPF-----YSNVCELA----A--NCDILIICCGLT 231 (300)
Q Consensus 169 g~~vgIiG~G~IG~~~A~~l~~~g~-~V~~~~~~~~~~-----~~~~~-----~~~l~e~l----~--~aDvV~l~~p~~ 231 (300)
|.+|.|+|.|.||...++.++..|. +|+..+++++.. .++.. ..++.+.+ . ..|+|+-++...
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~~ 246 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGDV 246 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCCh
Confidence 7799999999999999999999999 799988765421 12211 12333322 1 489999887643
Q ss_pred hhhhhcchHHHHhcCCCCcEEEEcC
Q 022233 232 AETHHMINKQVLSALGKEGVVINIG 256 (300)
Q Consensus 232 ~~t~~li~~~~l~~mk~ga~lIn~s 256 (300)
+. -...+..++++..++.++
T Consensus 247 ~~-----~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 247 HT-----FAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TH-----HHHHHHHEEEEEEEEECC
T ss_pred HH-----HHHHHHHHhcCCEEEEec
Confidence 32 235566777787777665
No 500
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.35 E-value=0.052 Score=47.62 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=31.9
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHHhCCCEEEEECCCC
Q 022233 167 LGGKRVGIVGL-GSIGSLVAKRLDAFGCSISYNSRTK 202 (300)
Q Consensus 167 l~g~~vgIiG~-G~IG~~~A~~l~~~g~~V~~~~~~~ 202 (300)
+.||++.|.|. |.||+.+|+.|...|++|...+|+.
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHA 40 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 67889999885 7899999999999999999888864
Done!