Your job contains 1 sequence.
>022234
MAQVSLFSLSSPFPASAVSSRLRLNRPLPFQFSRIQASSDATSASASNSNPKVVVTRERG
KNGKLIKALAKHRIDCLELPLIQHAQGPDTDRLSSVLNDTIFDWIIITSPEAGSVFLEAW
KEAGTPNVRIGVVGAGTASIFEEVIQSSKCSLDVAFSPSKATGKILASELPKNGKKKCTV
LYPASAKASNEIEEGLSNRGFEVVRLNTYTTEPVHHVDQTVLKQALSIPVVAVASPSAVR
SWVNLISDTEQWSNSVACIGETTASAAKRLGLKNVYYPTHPGLEGWVDSILEALREHGHF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022234
(300 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2066256 - symbol:HEMD species:3702 "Arabidopsi... 848 1.0e-84 1
TIGR_CMR|BA_4695 - symbol:BA_4695 "uroporphyrinogen-III s... 111 0.00039 1
UNIPROTKB|Q6MX34 - symbol:hemD "PROBABLE UROPORPHYRIN-III... 116 0.00044 1
TIGR_CMR|CHY_1209 - symbol:CHY_1209 "uroporphyrinogen-III... 110 0.00097 1
>TAIR|locus:2066256 [details] [associations]
symbol:HEMD species:3702 "Arabidopsis thaliana"
[GO:0004852 "uroporphyrinogen-III synthase activity"
evidence=IEA;ISS;IDA] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] [GO:0006780 "uroporphyrinogen III biosynthetic
process" evidence=IDA] InterPro:IPR003754 Pfam:PF02602
UniPathway:UPA00251 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006782 GO:GO:0015995 EMBL:AC002505
GO:GO:0006780 GO:GO:0004852 EMBL:AJ314569 EMBL:BT026116
EMBL:AY087255 EMBL:AY065389 IPI:IPI00537335 PIR:T00987
RefSeq:NP_565625.1 UniGene:At.28505 ProteinModelPortal:O48721
STRING:O48721 PaxDb:O48721 PRIDE:O48721 EnsemblPlants:AT2G26540.1
GeneID:817195 KEGG:ath:AT2G26540 TAIR:At2g26540 eggNOG:COG1587
HOGENOM:HOG000012769 InParanoid:O48721 KO:K01719 OMA:TRERGKN
PhylomeDB:O48721 ProtClustDB:CLSN2688449
BioCyc:MetaCyc:AT2G26540-MONOMER Genevestigator:O48721
SUPFAM:SSF69618 Uniprot:O48721
Length = 321
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 172/273 (63%), Positives = 199/273 (72%)
Query: 27 PLPFQFSRIQXXXXXXXXXXXXXN--PKVVVTRERGKNGKLIKALAKHRIDCLELPLIQH 84
P P + S I N P+VVVTRERGKN ++IKAL K+ I LELPLIQH
Sbjct: 40 PSPIRNS-ISSSVSSSSSSVSSSNSIPQVVVTRERGKNNQIIKALEKNGISSLELPLIQH 98
Query: 85 AQGPDTDRLSSVLNDTIFDWIIITSPEAGSVFLEAWKEAGTPNVRIGVVGAGTASIFEEV 144
A+GPD DRL+SVLND FDWIIITSPEAGSVFLEAWK A +P V+IGVVGAGTA +FEE
Sbjct: 99 ARGPDFDRLASVLNDKSFDWIIITSPEAGSVFLEAWKTASSPEVQIGVVGAGTARVFEEA 158
Query: 145 IQSSKCSLDVAFSPSKATGKILASELPKNGKKKCTVLYPASAKASNEIEEGLSNRGFEVV 204
++S+ L VAF+PSKATGK+LASELP+ K+ +VLYPAS KA N+I EGLS RGFEVV
Sbjct: 159 MKSADGLLHVAFTPSKATGKVLASELPEKVGKRSSVLYPASLKAGNDIVEGLSKRGFEVV 218
Query: 205 RLNTYTTEPVHHVDQTVLKQXXXXXXXXXXXXXXXXXWVNLISDTEQWSNSVACIGETTA 264
RLNTYTT PV VD +L+Q W++LI + EQWSN VACIGETTA
Sbjct: 219 RLNTYTTVPVQSVDTVLLQQALSAPVLSVASPSAVRAWLHLIQNEEQWSNYVACIGETTA 278
Query: 265 SAAKRLGLKNVYYPTHPGLEGWVDSILEALREH 297
SAA+RLGLKNVYYP PGLEGWV+SI+EAL H
Sbjct: 279 SAARRLGLKNVYYPEKPGLEGWVESIMEALGAH 311
>TIGR_CMR|BA_4695 [details] [associations]
symbol:BA_4695 "uroporphyrinogen-III synthase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004852
"uroporphyrinogen-III synthase activity" evidence=ISS] [GO:0006779
"porphyrin-containing compound biosynthetic process" evidence=ISS]
InterPro:IPR003754 Pfam:PF02602 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0004852 GO:GO:0033014 KO:K01719
SUPFAM:SSF69618 ProtClustDB:PRK05928 HOGENOM:HOG000247992
RefSeq:NP_846908.1 RefSeq:YP_021343.1 RefSeq:YP_030607.1
ProteinModelPortal:Q81LC8 DNASU:1083706
EnsemblBacteria:EBBACT00000010980 EnsemblBacteria:EBBACT00000015044
EnsemblBacteria:EBBACT00000021280 GeneID:1083706 GeneID:2816135
GeneID:2850993 KEGG:ban:BA_4695 KEGG:bar:GBAA_4695 KEGG:bat:BAS4360
OMA:IAAVGRK BioCyc:BANT260799:GJAJ-4415-MONOMER
BioCyc:BANT261594:GJ7F-4563-MONOMER Uniprot:Q81LC8
Length = 250
Score = 111 (44.1 bits), Expect = 0.00039, P = 0.00039
Identities = 52/250 (20%), Positives = 97/250 (38%)
Query: 53 VVVTRERGKNGKLIKALAKHRIDCLELPLIQHAQGPDTDRLSSVLNDT-IFDWIIITSPE 111
V++TR + + ++ A+ + LE+PL++ +G ++ + +DW+I TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLR-MEGMFHRQIQHIAGQLHSYDWVIFTSKN 67
Query: 112 AGSVFLEAWKEAGTPNVRIGVVGAGTASIFEEVIQSSKCSLDVAFSPSKATGKILASELP 171
+ FL+ + +I VG T ++ K V F P+ + A E
Sbjct: 68 GVAFFLDCLGKKLPVTTKIAAVGVKTK------LELEKRGYHVDFVPTSFVAEAFAEEFV 121
Query: 172 KNGKKKCTVLYPASAKASNEIEEGLSNRGFEVVRLNTYTTEPVHHVDQTVLK--QXXXXX 229
K +L+P A I L G + L Y T+ Q ++ +
Sbjct: 122 KRLSGNERILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVD 181
Query: 230 XXXXXXXXXXXXWVNLISDTE--QWSN--SVACIGETTASAAKRLGLKNVYYPTHPGLEG 285
+V L+ T +W+ ++ACIG T A L +V P +E
Sbjct: 182 IITFTSPSTVTSFVRLLEGTNWREWTKKCTIACIGPITEKEAS-LYFPHVIMPKEYTVEA 240
Query: 286 WVDSILEALR 295
+ + E+++
Sbjct: 241 LLQCVCESIK 250
>UNIPROTKB|Q6MX34 [details] [associations]
symbol:hemD "PROBABLE UROPORPHYRIN-III C-METHYLTRANSFERASE
HEMD (UROPORPHYRINOGEN III METHYLASE) (UROGEN III METHYLASE) (SUMT)
(UROGEN III METHYLASE) (UROM)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000878
InterPro:IPR003754 InterPro:IPR014776 InterPro:IPR014777
Pfam:PF00590 Pfam:PF02602 GO:GO:0005886 GO:GO:0040007
GenomeReviews:AL123456_GR EMBL:BX842573 GO:GO:0008168
Gene3D:3.30.950.10 Gene3D:3.40.1010.10 SUPFAM:SSF53790 KO:K02302
GO:GO:0004851 GO:GO:0004852 GO:GO:0033014 SUPFAM:SSF69618
EMBL:CP003248 RefSeq:NP_215025.2 RefSeq:YP_006513844.1
RefSeq:YP_177733.1 ProteinModelPortal:Q6MX34 SMR:Q6MX34
PRIDE:Q6MX34 EnsemblBacteria:EBMYCT00000002071 GeneID:13318385
GeneID:887280 GeneID:887481 KEGG:mtu:Rv0511 KEGG:mtu:Rv2847c
KEGG:mtv:RVBD_0511 PATRIC:18149630 TubercuList:Rv0511
HOGENOM:HOG000290967 KO:K13542 OMA:LYGWKVL ProtClustDB:CLSK799401
Uniprot:Q6MX34
Length = 565
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 60/252 (23%), Positives = 100/252 (39%)
Query: 53 VVVTRERGKNGKLIKALAKHRIDCLELPLI--QHAQGP-DTDRLSSVLNDTIFDWIIITS 109
V+V R + + G++ + L + +E+P I + + P +R L D F WI+ TS
Sbjct: 298 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWIVFTS 357
Query: 110 PEAGSVFLEAWKEAGTP-----NVRIGVVGAGTASIFEEVIQSSKCSLDVAFSPSKATGK 164
A E + E G V+I VG TA + +++ S ++ S +++
Sbjct: 358 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTA----DRVRAFGISPELVPSGEQSSLG 413
Query: 165 ILASELPKNG--KKKCTVLYPASAKASNEIEEGLSNRGFEVVRLNTYTTEPVHHVDQTVL 222
+L P + VL P + A+ + EGL RG+E+ + Y T T
Sbjct: 414 LLDDFPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATT- 472
Query: 223 KQXXXXXXXXXXXXXXXXXWVNL--ISDTEQWSNSVACIGETTASAAKRLGLKNVYYPTH 280
++ NL I+ +ACIG TA A GL+ P
Sbjct: 473 REMIKTGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDT 532
Query: 281 PGLEGWVDSILE 292
+ VD++ E
Sbjct: 533 AAIGPLVDALAE 544
>TIGR_CMR|CHY_1209 [details] [associations]
symbol:CHY_1209 "uroporphyrinogen-III synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004852 "uroporphyrinogen-III synthase activity" evidence=ISS]
[GO:0006779 "porphyrin-containing compound biosynthetic process"
evidence=ISS] InterPro:IPR003754 Pfam:PF02602 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0004852 GO:GO:0033014
eggNOG:COG1587 KO:K01719 SUPFAM:SSF69618 RefSeq:YP_360052.1
ProteinModelPortal:Q3ACT2 STRING:Q3ACT2 GeneID:3728595
KEGG:chy:CHY_1209 PATRIC:21275554
BioCyc:CHYD246194:GJCN-1208-MONOMER Uniprot:Q3ACT2
Length = 343
Score = 110 (43.8 bits), Expect = 0.00097, P = 0.00097
Identities = 56/218 (25%), Positives = 84/218 (38%)
Query: 77 LELPLIQHAQGPDTDRLSSVLNDTIFDWIIITSPEA--GSVFLEAWKEAGTPNV--RIGV 132
+E+PL++ PD +R+ L+ + +DW+I TS G F + N +I V
Sbjct: 124 IEVPLLKITYIPD-ERILQ-LDFSAYDWLIFTSAHGVEGFFFNLNYFNVSLENFIGKIAV 181
Query: 133 VGAGTASIFEEVIQSSKCSLDVAFSPSKATGKILASELPKNGKKKCTVLYPASAKASNEI 192
VG TA + K L FSP K T K LA EL +G + V+ E+
Sbjct: 182 VGEKTAKALK------KYGLTADFSPQKFTAKDLALELTTSGMIQKGVIVIQGNLGRPEL 235
Query: 193 EEGLSNRGFEVVRLNTYTTEPVHHVDQTV--LKQXXXXXXXXXXXXXXXXXWVNLISDTE 250
E L+ +L Y P + + L + + ISD
Sbjct: 236 LEILARNNIPTKKLVVYENAPNVDIKPFLNGLLKAKLIDVLFFTSPSTFNNFYQFISDEN 295
Query: 251 QWSNSVA-CIGETTASAAKRLGLKNVYYPTHPGLEG-W 286
N IG TT A + ++ Y+ + LEG W
Sbjct: 296 LAKNLPHFAIGPTTYEAFLQKDIRRKYFSSEHTLEGLW 333
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 300 253 0.00083 114 3 11 22 0.48 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 598 (64 KB)
Total size of DFA: 200 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.80u 0.09s 20.89t Elapsed: 00:00:01
Total cpu time: 20.80u 0.09s 20.89t Elapsed: 00:00:01
Start: Sat May 11 11:42:47 2013 End: Sat May 11 11:42:48 2013