Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>022235
MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSL
PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL
DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL
FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE
VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQLVVMSL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022235
        (300 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2033734 - symbol:ABCI7 "AT1G32500" species:370...   735  9.6e-73   1


>TAIR|locus:2033734 [details] [associations]
            symbol:ABCI7 "AT1G32500" species:3702 "Arabidopsis
            thaliana" [GO:0005215 "transporter activity" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016226
            "iron-sulfur cluster assembly" evidence=IEA;RCA;IDA] [GO:0006810
            "transport" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0009536 "plastid" evidence=IDA] [GO:0009793
            "embryo development ending in seed dormancy" evidence=RCA;IMP]
            [GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=RCA] [GO:0006569 "tryptophan catabolic
            process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
            process" evidence=RCA] [GO:0009902 "chloroplast relocation"
            evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
            [GO:0010228 "vegetative to reproductive phase transition of
            meristem" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
            evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
            evidence=RCA] [GO:0042793 "transcription from plastid promoter"
            evidence=RCA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0048481 "ovule development"
            evidence=RCA] InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0005215
            GO:GO:0009793 GO:GO:0016226 GO:GO:0010027 EMBL:AC007767
            EMBL:AY086585 IPI:IPI00547429 PIR:D86450 RefSeq:NP_564404.1
            UniGene:At.40131 ProteinModelPortal:Q9LQK7 IntAct:Q9LQK7
            STRING:Q9LQK7 PaxDb:Q9LQK7 PRIDE:Q9LQK7 EnsemblPlants:AT1G32500.1
            GeneID:840144 KEGG:ath:AT1G32500 TAIR:At1g32500 eggNOG:COG0719
            HOGENOM:HOG000069115 InParanoid:Q9LQK7 KO:K09015 OMA:LSTPWPS
            PhylomeDB:Q9LQK7 ProtClustDB:CLSN2688204 Genevestigator:Q9LQK7
            GermOnline:AT1G32500 TIGRFAMs:TIGR01981 Uniprot:Q9LQK7
        Length = 475

 Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
 Identities = 150/285 (52%), Positives = 184/285 (64%)

Query:    13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDXXXXXXXXXXXXXX 72
             N++  PKL   RR     + V  Q     A+FSDPFV+QLAESLED              
Sbjct:    15 NLSSKPKLKSNRRTTSTSVSVRAQ-----ASFSDPFVLQLAESLEDSLSASPSSSLPLQ- 68

Query:    73 XXKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
               ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+   R S  LD  T+ QF 
Sbjct:    69 --RIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126

Query:   130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
             + V+IDGF+ N  +  S+LPDGVY G   G+ D +  R+S+FI  F  GDLFWSINGMGA
Sbjct:   127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186

Query:   190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXX 249
             PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPR                   
Sbjct:   187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVG 246

Query:   250 XXXNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
                   YW N VLEVV+ K  K++HSYLQ +S+ +AHIKWT VRQ
Sbjct:   247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQ 291


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      300       262   0.00091  114 3  11 22  0.49    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  185 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.41u 0.10s 20.51t   Elapsed:  00:00:01
  Total cpu time:  20.41u 0.10s 20.51t   Elapsed:  00:00:01
  Start:  Sat May 11 11:43:01 2013   End:  Sat May 11 11:43:02 2013

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